Query 042242
Match_columns 303
No_of_seqs 139 out of 2112
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 06:59:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v6g_A Progesterone 5-beta-red 100.0 9.3E-33 3.2E-37 243.6 26.6 262 29-301 2-275 (364)
2 3ruf_A WBGU; rossmann fold, UD 100.0 6E-33 2.1E-37 243.7 23.4 251 26-299 23-294 (351)
3 3m2p_A UDP-N-acetylglucosamine 100.0 4.1E-32 1.4E-36 234.6 22.8 242 27-301 1-248 (311)
4 3slg_A PBGP3 protein; structur 100.0 3.1E-32 1.1E-36 241.0 22.6 262 22-301 18-298 (372)
5 4egb_A DTDP-glucose 4,6-dehydr 100.0 7.7E-32 2.6E-36 236.2 22.9 249 27-301 23-289 (346)
6 4id9_A Short-chain dehydrogena 100.0 1E-31 3.5E-36 235.5 20.6 251 25-301 16-296 (347)
7 3ehe_A UDP-glucose 4-epimerase 100.0 2.7E-31 9.3E-36 229.6 22.6 245 29-301 2-253 (313)
8 3ko8_A NAD-dependent epimerase 100.0 2.1E-31 7E-36 230.2 21.5 245 29-301 1-256 (312)
9 3sxp_A ADP-L-glycero-D-mannohe 100.0 2E-30 6.7E-35 228.7 25.2 244 26-297 8-273 (362)
10 3enk_A UDP-glucose 4-epimerase 100.0 1.4E-30 4.8E-35 227.7 23.8 260 27-301 4-289 (341)
11 1sb8_A WBPP; epimerase, 4-epim 100.0 1.9E-30 6.3E-35 228.0 23.2 251 27-301 26-301 (352)
12 2c20_A UDP-glucose 4-epimerase 100.0 3.7E-30 1.3E-34 224.0 24.8 258 29-301 2-276 (330)
13 3sc6_A DTDP-4-dehydrorhamnose 100.0 9.2E-31 3.1E-35 223.5 17.8 227 27-300 4-235 (287)
14 2hun_A 336AA long hypothetical 100.0 5.7E-30 2E-34 223.4 23.1 250 28-301 3-266 (336)
15 1ek6_A UDP-galactose 4-epimera 100.0 8.7E-30 3E-34 223.3 23.5 257 27-301 1-293 (348)
16 2pk3_A GDP-6-deoxy-D-LYXO-4-he 100.0 1.1E-29 3.9E-34 220.1 23.5 249 27-300 11-271 (321)
17 1rkx_A CDP-glucose-4,6-dehydra 100.0 1.5E-29 5E-34 222.7 24.4 251 27-301 8-288 (357)
18 1rpn_A GDP-mannose 4,6-dehydra 100.0 1.2E-29 4E-34 221.3 23.4 252 25-300 11-279 (335)
19 2p5y_A UDP-glucose 4-epimerase 100.0 1.6E-29 5.6E-34 218.2 23.6 247 29-301 1-264 (311)
20 2c5a_A GDP-mannose-3', 5'-epim 100.0 3.6E-29 1.2E-33 222.0 25.7 255 27-301 28-295 (379)
21 3gpi_A NAD-dependent epimerase 100.0 1.4E-30 4.7E-35 222.4 15.9 233 27-301 2-236 (286)
22 2ydy_A Methionine adenosyltran 100.0 4.8E-30 1.6E-34 222.0 19.0 240 27-301 1-248 (315)
23 1r6d_A TDP-glucose-4,6-dehydra 100.0 1.7E-29 5.8E-34 220.5 22.4 245 29-300 1-265 (337)
24 1oc2_A DTDP-glucose 4,6-dehydr 100.0 2E-29 7E-34 220.9 22.5 253 29-301 5-276 (348)
25 4b4o_A Epimerase family protei 100.0 3.2E-29 1.1E-33 215.1 23.1 232 29-300 1-240 (298)
26 2q1s_A Putative nucleotide sug 100.0 2.1E-29 7.3E-34 223.3 22.3 250 26-301 30-309 (377)
27 2x4g_A Nucleoside-diphosphate- 100.0 2E-29 6.9E-34 220.4 21.2 240 29-301 14-264 (342)
28 2bll_A Protein YFBG; decarboxy 100.0 5.4E-29 1.9E-33 217.8 23.6 254 29-300 1-274 (345)
29 1t2a_A GDP-mannose 4,6 dehydra 100.0 1.7E-28 5.9E-33 217.3 25.2 250 27-300 23-297 (375)
30 3ius_A Uncharacterized conserv 100.0 3.5E-29 1.2E-33 213.6 19.8 224 26-301 3-231 (286)
31 4b8w_A GDP-L-fucose synthase; 100.0 1.4E-29 4.8E-34 218.8 17.5 247 26-301 4-267 (319)
32 2pzm_A Putative nucleotide sug 100.0 3.1E-28 1.1E-32 212.0 25.8 244 22-299 14-265 (330)
33 1kew_A RMLB;, DTDP-D-glucose 4 100.0 6.3E-29 2.1E-33 218.9 21.4 256 29-301 1-282 (361)
34 2yy7_A L-threonine dehydrogena 100.0 2.1E-29 7.2E-34 217.5 17.4 249 27-298 1-262 (312)
35 1orr_A CDP-tyvelose-2-epimeras 100.0 1.6E-28 5.4E-33 215.1 22.1 260 29-301 2-292 (347)
36 1n7h_A GDP-D-mannose-4,6-dehyd 100.0 3.4E-28 1.2E-32 215.8 24.3 251 25-300 25-302 (381)
37 2z1m_A GDP-D-mannose dehydrata 100.0 3.7E-28 1.3E-32 212.5 23.9 250 27-300 2-268 (345)
38 2x6t_A ADP-L-glycero-D-manno-h 100.0 1.3E-28 4.3E-33 216.7 20.9 244 28-299 46-304 (357)
39 1gy8_A UDP-galactose 4-epimera 100.0 3.1E-28 1E-32 217.2 23.4 265 29-301 3-330 (397)
40 1vl0_A DTDP-4-dehydrorhamnose 100.0 8.7E-29 3E-33 211.8 18.7 226 27-300 11-241 (292)
41 1e6u_A GDP-fucose synthetase; 100.0 1.3E-28 4.4E-33 213.5 19.8 244 27-300 2-268 (321)
42 1n2s_A DTDP-4-, DTDP-glucose o 100.0 5.3E-29 1.8E-33 213.8 17.2 232 29-300 1-238 (299)
43 3vps_A TUNA, NAD-dependent epi 100.0 3E-29 1E-33 217.3 15.3 237 26-301 5-257 (321)
44 3dhn_A NAD-dependent epimerase 100.0 1.7E-28 5.9E-33 202.3 18.3 218 28-287 4-227 (227)
45 2q1w_A Putative nucleotide sug 100.0 1.3E-27 4.5E-32 208.3 24.7 240 27-299 20-267 (333)
46 1eq2_A ADP-L-glycero-D-mannohe 100.0 9.5E-29 3.3E-33 213.1 16.9 242 30-299 1-257 (310)
47 1i24_A Sulfolipid biosynthesis 100.0 5E-28 1.7E-32 216.3 22.1 253 27-301 10-329 (404)
48 1db3_A GDP-mannose 4,6-dehydra 100.0 1.2E-27 4.2E-32 211.4 24.0 248 29-300 2-273 (372)
49 1udb_A Epimerase, UDP-galactos 100.0 1.5E-27 5.1E-32 208.2 24.0 258 29-301 1-285 (338)
50 2b69_A UDP-glucuronate decarbo 100.0 2.6E-27 8.9E-32 207.2 22.8 245 27-301 26-286 (343)
51 2hrz_A AGR_C_4963P, nucleoside 100.0 2.6E-27 9E-32 207.0 20.5 255 26-300 12-286 (342)
52 1z7e_A Protein aRNA; rossmann 100.0 6.3E-27 2.2E-31 221.5 23.0 253 27-299 314-588 (660)
53 4f6c_A AUSA reductase domain p 100.0 9.9E-28 3.4E-32 216.0 16.0 248 26-297 67-343 (427)
54 3ajr_A NDP-sugar epimerase; L- 100.0 5.9E-27 2E-31 202.6 20.2 243 30-298 1-256 (317)
55 1z45_A GAL10 bifunctional prot 100.0 1.3E-26 4.3E-31 221.0 23.2 265 26-301 9-304 (699)
56 4f6l_B AUSA reductase domain p 99.9 1.2E-27 4.1E-32 220.0 15.1 247 28-296 150-424 (508)
57 4dqv_A Probable peptide synthe 99.9 4.7E-27 1.6E-31 214.2 17.8 256 26-300 71-382 (478)
58 2jl1_A Triphenylmethane reduct 99.9 2.2E-26 7.5E-31 196.3 18.6 216 29-301 1-222 (287)
59 2ggs_A 273AA long hypothetical 99.9 1.1E-25 3.9E-30 190.4 22.5 227 29-301 1-230 (273)
60 1xq6_A Unknown protein; struct 99.9 2.3E-26 7.9E-31 192.3 16.0 233 26-299 2-253 (253)
61 3ay3_A NAD-dependent epimerase 99.9 5E-26 1.7E-30 192.2 16.8 220 27-301 1-226 (267)
62 1y1p_A ARII, aldehyde reductas 99.9 4.2E-26 1.4E-30 199.2 16.6 254 25-299 8-293 (342)
63 3dqp_A Oxidoreductase YLBE; al 99.9 2.2E-26 7.4E-31 188.7 12.9 206 29-291 1-210 (219)
64 2rh8_A Anthocyanidin reductase 99.9 3.7E-26 1.3E-30 199.4 14.9 253 27-297 8-284 (338)
65 2gn4_A FLAA1 protein, UDP-GLCN 99.9 3.1E-25 1.1E-29 194.0 19.7 227 26-298 19-263 (344)
66 3rft_A Uronate dehydrogenase; 99.9 3E-25 1E-29 187.4 18.7 219 27-301 2-227 (267)
67 2p4h_X Vestitone reductase; NA 99.9 2E-25 6.9E-30 193.3 17.6 244 28-297 1-268 (322)
68 2c29_D Dihydroflavonol 4-reduc 99.9 1.7E-25 5.8E-30 195.2 16.8 246 27-297 4-272 (337)
69 3i6i_A Putative leucoanthocyan 99.9 1.3E-25 4.3E-30 196.8 15.9 225 26-301 8-246 (346)
70 3oh8_A Nucleoside-diphosphate 99.9 1.7E-25 5.7E-30 205.8 17.1 234 28-300 147-387 (516)
71 3nzo_A UDP-N-acetylglucosamine 99.9 3.5E-25 1.2E-29 197.3 18.6 226 27-300 34-285 (399)
72 3e8x_A Putative NAD-dependent 99.9 1.4E-25 4.9E-30 185.9 14.2 218 22-294 15-236 (236)
73 2zcu_A Uncharacterized oxidore 99.9 4.4E-25 1.5E-29 188.0 16.1 212 30-301 1-218 (286)
74 3e48_A Putative nucleoside-dip 99.9 4E-25 1.4E-29 188.8 15.7 219 29-301 1-220 (289)
75 3ew7_A LMO0794 protein; Q8Y8U8 99.9 3.4E-25 1.2E-29 181.6 14.0 214 29-287 1-220 (221)
76 3h2s_A Putative NADH-flavin re 99.9 1.1E-24 3.9E-29 178.9 17.0 215 29-287 1-222 (224)
77 2wm3_A NMRA-like family domain 99.9 4.7E-24 1.6E-28 183.0 14.5 225 28-301 5-238 (299)
78 3st7_A Capsular polysaccharide 99.9 3.3E-24 1.1E-28 189.3 11.0 210 29-299 1-219 (369)
79 2a35_A Hypothetical protein PA 99.9 7.2E-24 2.5E-28 173.0 9.0 205 27-287 4-213 (215)
80 1hdo_A Biliverdin IX beta redu 99.9 4E-22 1.4E-26 161.4 18.4 199 28-281 3-205 (206)
81 1qyd_A Pinoresinol-lariciresin 99.9 1E-22 3.5E-27 175.6 15.7 229 28-301 4-245 (313)
82 1qyc_A Phenylcoumaran benzylic 99.9 1.2E-22 4.1E-27 174.8 13.3 223 28-301 4-240 (308)
83 2r6j_A Eugenol synthase 1; phe 99.9 5.6E-23 1.9E-27 177.8 10.8 220 27-301 10-239 (318)
84 2gas_A Isoflavone reductase; N 99.9 3.3E-22 1.1E-26 172.0 13.8 223 28-301 2-239 (307)
85 3c1o_A Eugenol synthase; pheny 99.9 1.3E-22 4.4E-27 175.8 10.9 221 27-301 3-240 (321)
86 1xgk_A Nitrogen metabolite rep 99.9 6.2E-22 2.1E-26 173.5 15.2 227 28-301 5-241 (352)
87 2bgk_A Rhizome secoisolaricire 99.9 8.1E-21 2.8E-25 161.0 18.0 233 26-296 14-277 (278)
88 2bka_A CC3, TAT-interacting pr 99.9 2.4E-21 8.1E-26 161.0 13.5 206 27-280 17-228 (242)
89 3qvo_A NMRA family protein; st 99.9 3.1E-20 1.1E-24 153.7 20.2 206 24-282 19-226 (236)
90 1w6u_A 2,4-dienoyl-COA reducta 99.8 3.8E-20 1.3E-24 158.8 15.2 235 25-300 23-289 (302)
91 3m1a_A Putative dehydrogenase; 99.8 2E-19 7E-24 152.7 19.5 233 27-297 4-267 (281)
92 3svt_A Short-chain type dehydr 99.8 3.1E-19 1.1E-23 151.5 19.6 233 26-300 9-276 (281)
93 3r6d_A NAD-dependent epimerase 99.8 3E-19 1E-23 146.2 18.4 200 26-281 3-212 (221)
94 1fmc_A 7 alpha-hydroxysteroid 99.8 2.2E-19 7.5E-24 150.2 17.9 218 26-285 9-254 (255)
95 1spx_A Short-chain reductase f 99.8 1.6E-19 5.4E-24 153.1 14.8 232 26-296 4-277 (278)
96 1cyd_A Carbonyl reductase; sho 99.8 4.1E-19 1.4E-23 147.6 16.8 215 26-282 5-242 (244)
97 1uay_A Type II 3-hydroxyacyl-C 99.8 5.4E-19 1.8E-23 146.6 15.8 208 27-284 1-240 (242)
98 4e6p_A Probable sorbitol dehyd 99.8 1.2E-18 4E-23 146.3 17.9 224 27-284 7-259 (259)
99 2dkn_A 3-alpha-hydroxysteroid 99.8 1.3E-19 4.3E-24 151.5 11.7 224 29-287 2-252 (255)
100 3un1_A Probable oxidoreductase 99.8 1.9E-18 6.6E-23 144.9 18.4 209 27-283 27-257 (260)
101 2pd6_A Estradiol 17-beta-dehyd 99.8 1.2E-18 4E-23 146.6 17.0 219 26-288 5-262 (264)
102 3awd_A GOX2181, putative polyo 99.8 6.6E-18 2.2E-22 141.7 19.8 217 26-282 11-258 (260)
103 2cfc_A 2-(R)-hydroxypropyl-COM 99.8 6.7E-18 2.3E-22 140.8 19.1 213 27-281 1-247 (250)
104 3d3w_A L-xylulose reductase; u 99.8 3.6E-18 1.2E-22 141.9 17.3 215 26-282 5-242 (244)
105 3ai3_A NADPH-sorbose reductase 99.8 4.5E-18 1.5E-22 143.0 17.8 218 26-284 5-262 (263)
106 3tzq_B Short-chain type dehydr 99.8 3.5E-17 1.2E-21 138.1 23.0 228 26-296 9-265 (271)
107 2zat_A Dehydrogenase/reductase 99.8 9.1E-18 3.1E-22 140.9 18.3 218 25-284 11-259 (260)
108 3osu_A 3-oxoacyl-[acyl-carrier 99.8 9.2E-18 3.1E-22 139.7 17.9 212 27-282 3-245 (246)
109 3dii_A Short-chain dehydrogena 99.8 1.4E-17 4.8E-22 138.7 18.8 207 27-283 1-231 (247)
110 1h5q_A NADP-dependent mannitol 99.8 1.2E-17 4.1E-22 140.4 18.4 220 26-282 12-263 (265)
111 2pnf_A 3-oxoacyl-[acyl-carrier 99.8 9.3E-18 3.2E-22 139.7 17.5 212 26-281 5-247 (248)
112 3imf_A Short chain dehydrogena 99.8 1.8E-17 6.2E-22 138.8 19.0 220 25-285 3-254 (257)
113 1nff_A Putative oxidoreductase 99.8 1.3E-17 4.4E-22 139.9 18.1 208 26-282 5-239 (260)
114 3afn_B Carbonyl reductase; alp 99.8 2.7E-18 9.3E-23 143.8 13.8 214 26-281 5-255 (258)
115 3v2h_A D-beta-hydroxybutyrate 99.8 1.7E-17 5.8E-22 140.8 18.5 224 25-281 22-278 (281)
116 3tpc_A Short chain alcohol deh 99.8 3.5E-17 1.2E-21 137.1 20.2 213 27-284 6-255 (257)
117 2fwm_X 2,3-dihydro-2,3-dihydro 99.8 4E-17 1.4E-21 136.2 20.2 219 26-282 5-247 (250)
118 4eso_A Putative oxidoreductase 99.8 1.9E-17 6.6E-22 138.5 18.3 222 26-288 6-254 (255)
119 2wyu_A Enoyl-[acyl carrier pro 99.8 2.2E-17 7.5E-22 138.6 18.7 220 26-287 6-258 (261)
120 1yxm_A Pecra, peroxisomal tran 99.8 1.6E-17 5.5E-22 142.5 18.2 218 25-284 15-268 (303)
121 3lyl_A 3-oxoacyl-(acyl-carrier 99.8 1.7E-17 5.7E-22 138.2 17.6 214 26-283 3-246 (247)
122 3gaf_A 7-alpha-hydroxysteroid 99.8 2.1E-17 7.1E-22 138.4 18.2 218 25-285 9-255 (256)
123 1zk4_A R-specific alcohol dehy 99.8 1.1E-17 3.9E-22 139.4 16.6 215 26-282 4-249 (251)
124 3i4f_A 3-oxoacyl-[acyl-carrier 99.8 1.7E-17 5.9E-22 139.5 17.6 217 27-285 6-255 (264)
125 3qiv_A Short-chain dehydrogena 99.8 8.7E-18 3E-22 140.4 15.7 219 26-284 7-252 (253)
126 3gem_A Short chain dehydrogena 99.8 1.5E-17 5.1E-22 139.5 17.0 210 27-284 26-258 (260)
127 1xq1_A Putative tropinone redu 99.8 1.5E-17 5.2E-22 140.0 17.2 214 26-282 12-256 (266)
128 3ak4_A NADH-dependent quinucli 99.8 5.3E-17 1.8E-21 136.5 20.3 216 26-283 10-262 (263)
129 3s55_A Putative short-chain de 99.8 8.6E-17 3E-21 136.5 21.8 222 26-284 8-279 (281)
130 1ja9_A 4HNR, 1,3,6,8-tetrahydr 99.8 7.9E-18 2.7E-22 142.2 15.1 217 26-281 19-273 (274)
131 3f9i_A 3-oxoacyl-[acyl-carrier 99.8 2.5E-17 8.5E-22 137.3 17.8 216 23-282 9-247 (249)
132 3ek2_A Enoyl-(acyl-carrier-pro 99.8 3.6E-17 1.2E-21 138.0 19.0 226 23-290 9-268 (271)
133 2o23_A HADH2 protein; HSD17B10 99.8 6.3E-17 2.1E-21 136.0 20.4 214 26-284 10-262 (265)
134 3k31_A Enoyl-(acyl-carrier-pro 99.8 7.6E-17 2.6E-21 137.8 21.0 219 26-286 28-279 (296)
135 3sx2_A Putative 3-ketoacyl-(ac 99.8 6.1E-17 2.1E-21 137.2 20.1 228 25-282 10-276 (278)
136 4dqx_A Probable oxidoreductase 99.8 2.8E-17 9.5E-22 139.1 17.8 221 25-284 24-272 (277)
137 2ae2_A Protein (tropinone redu 99.8 2.3E-17 7.8E-22 138.5 17.2 219 26-284 7-257 (260)
138 1qsg_A Enoyl-[acyl-carrier-pro 99.8 5.8E-17 2E-21 136.4 19.5 217 27-284 8-257 (265)
139 3rd5_A Mypaa.01249.C; ssgcid, 99.8 3.4E-17 1.2E-21 139.7 18.0 242 26-301 14-290 (291)
140 2dtx_A Glucose 1-dehydrogenase 99.8 1.1E-16 3.9E-21 134.5 20.7 210 26-281 6-246 (264)
141 3ijr_A Oxidoreductase, short c 99.8 3.7E-17 1.3E-21 139.4 18.0 215 26-283 45-289 (291)
142 3gk3_A Acetoacetyl-COA reducta 99.8 7.6E-17 2.6E-21 135.9 19.6 215 27-284 24-269 (269)
143 1edo_A Beta-keto acyl carrier 99.8 1.2E-17 4E-22 138.8 14.2 212 28-281 1-242 (244)
144 3vtz_A Glucose 1-dehydrogenase 99.8 5.5E-17 1.9E-21 136.8 18.5 219 22-282 8-254 (269)
145 4dmm_A 3-oxoacyl-[acyl-carrier 99.8 8.6E-17 3E-21 135.5 19.4 213 26-284 26-269 (269)
146 3d7l_A LIN1944 protein; APC893 99.8 2.2E-17 7.6E-22 133.1 15.1 184 29-278 4-202 (202)
147 3tox_A Short chain dehydrogena 99.8 6E-17 2E-21 137.3 18.4 223 26-288 6-260 (280)
148 3uf0_A Short-chain dehydrogena 99.8 6.9E-17 2.4E-21 136.4 18.7 217 25-283 28-272 (273)
149 3orf_A Dihydropteridine reduct 99.8 3.9E-17 1.3E-21 136.3 16.9 208 22-284 16-246 (251)
150 2d1y_A Hypothetical protein TT 99.8 3.8E-17 1.3E-21 136.8 16.9 221 26-285 4-249 (256)
151 3oid_A Enoyl-[acyl-carrier-pro 99.8 9.6E-17 3.3E-21 134.4 19.4 216 27-284 3-249 (258)
152 3n74_A 3-ketoacyl-(acyl-carrie 99.8 5.5E-17 1.9E-21 136.2 17.9 220 26-285 7-258 (261)
153 3pxx_A Carveol dehydrogenase; 99.8 3.7E-17 1.3E-21 139.1 17.1 235 26-284 8-286 (287)
154 1gee_A Glucose 1-dehydrogenase 99.8 5.5E-17 1.9E-21 136.1 17.8 215 26-282 5-251 (261)
155 2q2v_A Beta-D-hydroxybutyrate 99.8 4.7E-17 1.6E-21 136.1 17.3 221 26-282 2-253 (255)
156 1xhl_A Short-chain dehydrogena 99.8 2.3E-17 7.7E-22 141.1 15.7 234 27-296 25-295 (297)
157 2hq1_A Glucose/ribitol dehydro 99.8 1.6E-17 5.5E-22 138.2 14.4 210 27-281 4-245 (247)
158 3gvc_A Oxidoreductase, probabl 99.7 2.2E-17 7.4E-22 139.8 15.2 221 26-284 27-275 (277)
159 3op4_A 3-oxoacyl-[acyl-carrier 99.7 7.3E-17 2.5E-21 134.4 18.1 213 26-282 7-246 (248)
160 2wsb_A Galactitol dehydrogenas 99.7 1.9E-17 6.6E-22 138.3 14.6 216 26-281 9-251 (254)
161 3qlj_A Short chain dehydrogena 99.7 3.4E-17 1.2E-21 141.6 16.6 227 27-301 26-315 (322)
162 3pk0_A Short-chain dehydrogena 99.7 3.9E-17 1.3E-21 137.1 16.5 215 26-283 8-253 (262)
163 4e4y_A Short chain dehydrogena 99.7 9.6E-17 3.3E-21 133.4 18.6 212 27-282 3-242 (244)
164 2c07_A 3-oxoacyl-(acyl-carrier 99.7 6.6E-17 2.3E-21 137.5 17.8 211 27-281 43-283 (285)
165 3ftp_A 3-oxoacyl-[acyl-carrier 99.7 5.5E-17 1.9E-21 136.8 17.0 215 26-284 26-270 (270)
166 2z1n_A Dehydrogenase; reductas 99.7 7.5E-17 2.6E-21 135.3 17.7 223 26-281 5-258 (260)
167 1hdc_A 3-alpha, 20 beta-hydrox 99.7 5.1E-17 1.7E-21 135.8 16.6 213 26-282 3-243 (254)
168 1ae1_A Tropinone reductase-I; 99.7 1.5E-16 5.3E-21 134.3 19.6 218 26-282 19-268 (273)
169 3rih_A Short chain dehydrogena 99.7 4.7E-17 1.6E-21 138.7 16.5 215 27-284 40-285 (293)
170 3r3s_A Oxidoreductase; structu 99.7 5.9E-17 2E-21 138.3 17.0 215 27-283 48-293 (294)
171 1iy8_A Levodione reductase; ox 99.7 9.5E-17 3.2E-21 135.2 18.1 220 26-284 11-266 (267)
172 3oig_A Enoyl-[acyl-carrier-pro 99.7 4E-16 1.4E-20 131.3 21.8 217 26-284 5-256 (266)
173 2p91_A Enoyl-[acyl-carrier-pro 99.7 5.5E-16 1.9E-20 131.8 22.4 215 27-282 20-267 (285)
174 3pgx_A Carveol dehydrogenase; 99.7 2.8E-16 9.6E-21 133.2 20.4 221 25-281 12-277 (280)
175 4fc7_A Peroxisomal 2,4-dienoyl 99.7 3.4E-17 1.2E-21 138.7 14.7 221 25-286 24-275 (277)
176 2ph3_A 3-oxoacyl-[acyl carrier 99.7 6.9E-17 2.3E-21 134.2 16.3 209 29-281 2-242 (245)
177 3v8b_A Putative dehydrogenase, 99.7 3.6E-16 1.2E-20 132.7 20.9 221 27-281 27-279 (283)
178 2gdz_A NAD+-dependent 15-hydro 99.7 1.8E-17 6.2E-22 139.6 12.7 220 27-288 6-258 (267)
179 4ibo_A Gluconate dehydrogenase 99.7 4.1E-17 1.4E-21 137.7 14.8 217 26-284 24-270 (271)
180 3tl3_A Short-chain type dehydr 99.7 1.1E-16 3.7E-21 134.1 17.3 214 26-284 7-255 (257)
181 1x1t_A D(-)-3-hydroxybutyrate 99.7 1.5E-16 5.1E-21 133.5 18.1 224 27-281 3-257 (260)
182 1uls_A Putative 3-oxoacyl-acyl 99.7 6.6E-16 2.2E-20 128.4 21.8 211 27-282 4-239 (245)
183 4egf_A L-xylulose reductase; s 99.7 7.7E-17 2.6E-21 135.7 16.3 216 26-283 18-265 (266)
184 2yut_A Putative short-chain ox 99.7 1.3E-17 4.6E-22 134.9 11.3 181 29-266 1-200 (207)
185 2uvd_A 3-oxoacyl-(acyl-carrier 99.7 9.3E-17 3.2E-21 133.6 16.6 211 27-281 3-244 (246)
186 1uzm_A 3-oxoacyl-[acyl-carrier 99.7 4.5E-16 1.5E-20 129.5 20.8 211 25-283 12-245 (247)
187 1yo6_A Putative carbonyl reduc 99.7 1.5E-16 5.1E-21 132.4 17.9 201 27-279 2-245 (250)
188 2rhc_B Actinorhodin polyketide 99.7 2.2E-16 7.6E-21 133.6 19.2 215 26-281 20-274 (277)
189 3p19_A BFPVVD8, putative blue 99.7 2.3E-16 8E-21 132.7 19.1 202 25-267 13-238 (266)
190 2bd0_A Sepiapterin reductase; 99.7 1.5E-16 5E-21 132.2 17.6 204 27-282 1-240 (244)
191 1mxh_A Pteridine reductase 2; 99.7 1.1E-16 3.9E-21 135.4 17.2 211 26-281 9-271 (276)
192 4da9_A Short-chain dehydrogena 99.7 1.9E-16 6.4E-21 134.3 18.4 216 26-283 27-277 (280)
193 3cxt_A Dehydrogenase with diff 99.7 2.1E-16 7.2E-21 134.6 18.9 218 26-282 32-282 (291)
194 3grk_A Enoyl-(acyl-carrier-pro 99.7 4.2E-16 1.4E-20 133.0 20.7 217 26-284 29-278 (293)
195 4iin_A 3-ketoacyl-acyl carrier 99.7 2.4E-16 8.1E-21 133.0 19.0 215 25-282 26-270 (271)
196 3uce_A Dehydrogenase; rossmann 99.7 3.3E-16 1.1E-20 128.3 19.2 202 27-283 5-222 (223)
197 3r1i_A Short-chain type dehydr 99.7 5.1E-16 1.8E-20 131.3 20.9 214 26-282 30-274 (276)
198 1geg_A Acetoin reductase; SDR 99.7 9.3E-17 3.2E-21 134.4 16.2 214 27-282 1-254 (256)
199 3v2g_A 3-oxoacyl-[acyl-carrier 99.7 8.9E-16 3E-20 129.5 22.2 213 25-281 28-269 (271)
200 3u9l_A 3-oxoacyl-[acyl-carrier 99.7 4.4E-16 1.5E-20 134.6 20.7 158 27-206 4-196 (324)
201 3uxy_A Short-chain dehydrogena 99.7 6.7E-17 2.3E-21 136.0 15.2 216 26-284 26-266 (266)
202 1xkq_A Short-chain reductase f 99.7 7.3E-17 2.5E-21 136.8 15.5 223 26-283 4-264 (280)
203 1sby_A Alcohol dehydrogenase; 99.7 5E-17 1.7E-21 135.9 14.3 212 26-286 3-247 (254)
204 3grp_A 3-oxoacyl-(acyl carrier 99.7 4.5E-17 1.5E-21 137.0 14.0 212 27-282 26-264 (266)
205 4iiu_A 3-oxoacyl-[acyl-carrier 99.7 4.8E-16 1.6E-20 130.9 20.2 213 24-281 22-266 (267)
206 3nrc_A Enoyl-[acyl-carrier-pro 99.7 5.2E-16 1.8E-20 131.6 20.6 215 27-283 25-273 (280)
207 2nm0_A Probable 3-oxacyl-(acyl 99.7 1.7E-16 5.6E-21 132.6 17.1 212 25-283 18-251 (253)
208 2ew8_A (S)-1-phenylethanol deh 99.7 4.1E-16 1.4E-20 129.9 19.4 215 26-282 5-247 (249)
209 2ehd_A Oxidoreductase, oxidore 99.7 2.3E-16 7.7E-21 130.2 17.5 186 27-266 4-215 (234)
210 4e3z_A Putative oxidoreductase 99.7 3.5E-16 1.2E-20 132.0 19.0 211 28-280 26-271 (272)
211 1vl8_A Gluconate 5-dehydrogena 99.7 3.4E-16 1.2E-20 131.7 18.8 217 23-281 16-264 (267)
212 2ag5_A DHRS6, dehydrogenase/re 99.7 2.4E-16 8.3E-21 131.1 17.6 218 26-281 4-243 (246)
213 3ucx_A Short chain dehydrogena 99.7 2.3E-16 8E-21 132.6 17.7 220 26-283 9-263 (264)
214 1hxh_A 3BETA/17BETA-hydroxyste 99.7 9.1E-17 3.1E-21 134.2 15.0 217 26-282 4-249 (253)
215 3ezl_A Acetoacetyl-COA reducta 99.7 2.7E-16 9.2E-21 131.5 17.8 216 24-283 9-255 (256)
216 3edm_A Short chain dehydrogena 99.7 5.2E-16 1.8E-20 130.1 19.5 219 26-286 6-253 (259)
217 1yde_A Retinal dehydrogenase/r 99.7 9.1E-17 3.1E-21 135.5 14.8 226 26-291 7-259 (270)
218 1ooe_A Dihydropteridine reduct 99.7 7.1E-17 2.4E-21 133.5 13.8 202 27-281 2-228 (236)
219 2pd4_A Enoyl-[acyl-carrier-pro 99.7 1.2E-15 4E-20 129.1 21.1 216 26-282 4-251 (275)
220 2ekp_A 2-deoxy-D-gluconate 3-d 99.7 3.5E-16 1.2E-20 129.6 17.1 213 27-281 1-236 (239)
221 3ctm_A Carbonyl reductase; alc 99.7 4E-16 1.4E-20 132.2 17.7 214 26-282 32-277 (279)
222 3rwb_A TPLDH, pyridoxal 4-dehy 99.7 4E-16 1.4E-20 129.8 17.2 215 25-282 3-245 (247)
223 2b4q_A Rhamnolipids biosynthes 99.7 1E-15 3.5E-20 129.4 19.8 213 27-281 28-274 (276)
224 3l77_A Short-chain alcohol deh 99.7 1E-15 3.5E-20 126.3 19.2 204 28-282 2-232 (235)
225 3uve_A Carveol dehydrogenase ( 99.7 3.9E-15 1.3E-19 126.5 23.3 220 26-283 9-285 (286)
226 3a28_C L-2.3-butanediol dehydr 99.7 9.2E-16 3.1E-20 128.5 19.1 215 27-283 1-257 (258)
227 3is3_A 17BETA-hydroxysteroid d 99.7 1.9E-15 6.6E-20 127.4 20.9 219 25-281 15-269 (270)
228 3o38_A Short chain dehydrogena 99.7 1.2E-15 4E-20 128.4 19.5 213 26-281 20-265 (266)
229 3sju_A Keto reductase; short-c 99.7 6.1E-16 2.1E-20 131.1 17.7 217 27-282 23-277 (279)
230 2a4k_A 3-oxoacyl-[acyl carrier 99.7 1E-15 3.5E-20 128.5 18.9 215 26-284 4-242 (263)
231 3f1l_A Uncharacterized oxidore 99.7 4.4E-16 1.5E-20 130.0 16.4 211 25-287 9-252 (252)
232 3lf2_A Short chain oxidoreduct 99.7 1.4E-15 4.7E-20 127.9 19.5 220 26-282 6-262 (265)
233 3t7c_A Carveol dehydrogenase; 99.7 3.2E-15 1.1E-19 127.8 22.2 221 26-283 26-298 (299)
234 1fjh_A 3alpha-hydroxysteroid d 99.7 1.2E-16 4.3E-21 133.6 12.8 225 29-284 2-251 (257)
235 3ppi_A 3-hydroxyacyl-COA dehyd 99.7 1.2E-15 4E-20 129.4 18.6 213 27-284 29-279 (281)
236 3t4x_A Oxidoreductase, short c 99.7 2.5E-15 8.6E-20 126.5 20.3 225 27-285 9-266 (267)
237 1o5i_A 3-oxoacyl-(acyl carrier 99.7 1.1E-15 3.9E-20 127.2 17.9 212 23-282 14-245 (249)
238 1g0o_A Trihydroxynaphthalene r 99.7 2.3E-15 7.9E-20 127.8 20.1 220 26-281 27-281 (283)
239 1dhr_A Dihydropteridine reduct 99.7 5.1E-16 1.7E-20 128.7 15.5 201 27-281 6-231 (241)
240 4dyv_A Short-chain dehydrogena 99.7 3.8E-16 1.3E-20 131.8 14.8 199 26-268 26-254 (272)
241 3icc_A Putative 3-oxoacyl-(acy 99.7 3.4E-15 1.2E-19 124.7 20.5 214 27-282 6-254 (255)
242 1sny_A Sniffer CG10964-PA; alp 99.7 1.6E-15 5.5E-20 127.6 18.5 162 24-205 17-224 (267)
243 3kzv_A Uncharacterized oxidore 99.7 8.2E-16 2.8E-20 128.5 16.6 220 27-283 1-250 (254)
244 3rkr_A Short chain oxidoreduct 99.7 1.4E-15 4.9E-20 127.6 17.9 191 26-267 27-248 (262)
245 3tsc_A Putative oxidoreductase 99.7 2.4E-15 8.1E-20 127.3 19.3 221 26-281 9-274 (277)
246 1wma_A Carbonyl reductase [NAD 99.7 8.4E-16 2.9E-20 129.7 16.3 122 27-149 3-143 (276)
247 3ioy_A Short-chain dehydrogena 99.7 8.3E-16 2.8E-20 132.7 16.3 158 26-206 6-201 (319)
248 3oec_A Carveol dehydrogenase ( 99.7 5.8E-15 2E-19 127.3 21.3 221 27-282 45-314 (317)
249 4imr_A 3-oxoacyl-(acyl-carrier 99.7 1.2E-15 4.1E-20 128.9 16.6 215 26-280 31-274 (275)
250 2x9g_A PTR1, pteridine reducta 99.7 1.7E-15 5.7E-20 129.0 17.4 211 26-282 21-284 (288)
251 3ged_A Short-chain dehydrogena 99.7 3.3E-15 1.1E-19 123.3 18.5 206 27-282 1-230 (247)
252 3guy_A Short-chain dehydrogena 99.7 1.6E-15 5.5E-20 124.8 16.6 189 29-267 2-212 (230)
253 3tjr_A Short chain dehydrogena 99.7 2.3E-15 7.8E-20 128.9 17.9 206 27-265 30-266 (301)
254 3u5t_A 3-oxoacyl-[acyl-carrier 99.7 3.2E-15 1.1E-19 125.8 18.4 212 27-280 26-265 (267)
255 1yb1_A 17-beta-hydroxysteroid 99.7 1.2E-15 4E-20 128.8 15.1 191 24-266 27-249 (272)
256 3ksu_A 3-oxoacyl-acyl carrier 99.7 1.9E-15 6.5E-20 126.8 16.3 218 26-286 9-256 (262)
257 1zem_A Xylitol dehydrogenase; 99.7 1.3E-15 4.3E-20 127.9 14.7 157 26-205 5-192 (262)
258 3l6e_A Oxidoreductase, short-c 99.7 3.2E-15 1.1E-19 123.4 16.5 190 27-267 2-216 (235)
259 3h7a_A Short chain dehydrogena 99.7 3.7E-15 1.3E-19 124.3 17.0 198 26-267 5-232 (252)
260 2qhx_A Pteridine reductase 1; 99.7 7E-15 2.4E-19 127.3 18.9 211 27-282 45-324 (328)
261 3tfo_A Putative 3-oxoacyl-(acy 99.7 5.2E-15 1.8E-19 124.1 16.8 197 27-267 3-227 (264)
262 3zv4_A CIS-2,3-dihydrobiphenyl 99.6 3.1E-15 1E-19 126.9 14.7 219 26-282 3-256 (281)
263 3sc4_A Short chain dehydrogena 99.6 1.4E-14 4.9E-19 122.9 18.7 204 26-279 7-247 (285)
264 2nwq_A Probable short-chain de 99.6 4.7E-15 1.6E-19 125.0 15.0 209 28-280 21-259 (272)
265 4b79_A PA4098, probable short- 99.6 3.8E-14 1.3E-18 116.2 19.8 215 26-281 9-239 (242)
266 3gdg_A Probable NADP-dependent 99.6 1.1E-14 3.7E-19 122.5 16.7 216 26-282 18-265 (267)
267 2jah_A Clavulanic acid dehydro 99.6 7.2E-15 2.5E-19 122.2 14.9 157 26-206 5-191 (247)
268 3e03_A Short chain dehydrogena 99.6 4.1E-14 1.4E-18 119.5 19.3 200 26-275 4-240 (274)
269 4dry_A 3-oxoacyl-[acyl-carrier 99.6 6.3E-15 2.2E-19 124.9 14.2 199 26-268 31-263 (281)
270 1e7w_A Pteridine reductase; di 99.6 2.6E-14 8.8E-19 121.8 17.8 213 26-283 7-288 (291)
271 1zmt_A Haloalcohol dehalogenas 99.6 9.5E-15 3.3E-19 122.0 14.7 211 29-282 2-244 (254)
272 3nyw_A Putative oxidoreductase 99.6 4E-15 1.4E-19 124.0 12.4 191 26-267 5-227 (250)
273 3rku_A Oxidoreductase YMR226C; 99.6 1.1E-14 3.9E-19 123.6 15.0 213 27-282 32-279 (287)
274 3e9n_A Putative short-chain de 99.6 3.7E-15 1.3E-19 123.8 10.5 200 27-278 4-226 (245)
275 3asu_A Short-chain dehydrogena 99.6 1.5E-14 5E-19 120.4 13.8 208 29-280 1-236 (248)
276 4fn4_A Short chain dehydrogena 99.6 2E-13 6.9E-18 113.1 20.4 219 25-282 4-252 (254)
277 1xg5_A ARPG836; short chain de 99.6 2E-14 6.9E-19 121.7 14.8 201 26-266 30-265 (279)
278 3kvo_A Hydroxysteroid dehydrog 99.6 1.2E-13 4E-18 120.3 19.7 205 25-280 42-282 (346)
279 3i1j_A Oxidoreductase, short c 99.6 6.7E-14 2.3E-18 116.3 17.4 159 25-205 11-203 (247)
280 1xu9_A Corticosteroid 11-beta- 99.6 9.8E-15 3.3E-19 124.1 12.6 192 25-266 25-247 (286)
281 4fgs_A Probable dehydrogenase 99.6 1.3E-13 4.5E-18 115.3 18.0 218 26-281 27-270 (273)
282 4gkb_A 3-oxoacyl-[acyl-carrier 99.6 1.7E-13 5.7E-18 114.1 17.6 220 26-282 5-251 (258)
283 3u0b_A Oxidoreductase, short c 99.6 1E-13 3.4E-18 124.9 16.9 213 27-282 212-451 (454)
284 4h15_A Short chain alcohol deh 99.5 7.7E-13 2.6E-17 110.4 19.6 216 26-283 9-259 (261)
285 4g81_D Putative hexonate dehyd 99.5 1.8E-13 6.3E-18 113.4 15.5 215 26-281 7-251 (255)
286 4fs3_A Enoyl-[acyl-carrier-pro 99.5 1.8E-12 6.3E-17 108.1 21.3 215 26-281 4-252 (256)
287 1y7t_A Malate dehydrogenase; N 99.5 2.3E-15 7.7E-20 130.4 3.4 161 28-208 4-188 (327)
288 2qq5_A DHRS1, dehydrogenase/re 99.5 1E-13 3.6E-18 116.1 12.4 157 26-206 3-197 (260)
289 2h7i_A Enoyl-[acyl-carrier-pro 99.5 2.8E-13 9.4E-18 114.0 15.0 217 26-281 5-264 (269)
290 1jtv_A 17 beta-hydroxysteroid 99.5 1.5E-13 5.2E-18 118.9 13.5 156 28-206 2-191 (327)
291 1zmo_A Halohydrin dehalogenase 99.5 8.9E-14 3E-18 115.4 11.6 213 28-281 1-242 (244)
292 3o26_A Salutaridine reductase; 99.5 3.7E-13 1.3E-17 115.4 15.4 122 26-148 10-183 (311)
293 1oaa_A Sepiapterin reductase; 99.5 3.8E-13 1.3E-17 112.5 14.4 157 26-205 4-202 (259)
294 4hp8_A 2-deoxy-D-gluconate 3-d 99.5 8.6E-13 2.9E-17 108.4 16.1 215 26-281 7-244 (247)
295 2fr1_A Erythromycin synthase, 99.5 4.5E-13 1.5E-17 121.7 14.7 209 27-293 225-460 (486)
296 1gz6_A Estradiol 17 beta-dehyd 99.5 6.4E-13 2.2E-17 114.5 13.2 154 26-203 7-197 (319)
297 2z5l_A Tylkr1, tylactone synth 99.4 2.2E-12 7.5E-17 117.7 15.3 210 27-293 258-490 (511)
298 1d7o_A Enoyl-[acyl-carrier pro 99.4 2.2E-11 7.6E-16 103.8 20.3 216 26-282 6-286 (297)
299 3mje_A AMPHB; rossmann fold, o 99.4 3.1E-12 1.1E-16 116.0 14.4 155 27-206 238-420 (496)
300 3oml_A GH14720P, peroxisomal m 99.3 2.3E-11 8E-16 113.6 14.0 120 24-145 15-161 (613)
301 3qp9_A Type I polyketide synth 99.3 3.1E-11 1.1E-15 110.6 13.8 155 27-203 250-444 (525)
302 3lt0_A Enoyl-ACP reductase; tr 99.3 1.4E-10 4.6E-15 100.4 15.9 156 28-206 2-223 (329)
303 2ptg_A Enoyl-acyl carrier redu 99.3 1.4E-10 4.7E-15 99.9 15.4 221 26-282 7-306 (319)
304 2o2s_A Enoyl-acyl carrier redu 99.2 7.4E-10 2.5E-14 95.2 19.5 218 26-281 7-292 (315)
305 3slk_A Polyketide synthase ext 99.0 1.7E-09 5.8E-14 103.8 11.6 165 15-205 517-708 (795)
306 3ic5_A Putative saccharopine d 99.0 6.1E-10 2.1E-14 81.0 6.3 72 27-100 4-77 (118)
307 2et6_A (3R)-hydroxyacyl-COA de 98.9 3.4E-08 1.2E-12 92.0 17.6 219 26-299 320-581 (604)
308 4eue_A Putative reductase CA_C 98.9 6.6E-08 2.3E-12 85.5 16.9 76 26-102 58-161 (418)
309 3s8m_A Enoyl-ACP reductase; ro 98.9 6.4E-08 2.2E-12 85.1 16.6 64 27-91 60-143 (422)
310 2uv8_A Fatty acid synthase sub 98.9 4.1E-08 1.4E-12 99.8 15.9 156 26-205 673-874 (1887)
311 2uv9_A Fatty acid synthase alp 98.9 3E-08 1E-12 100.7 14.7 104 26-130 650-784 (1878)
312 3zu3_A Putative reductase YPO4 98.8 7E-08 2.4E-12 84.2 14.5 76 26-102 45-147 (405)
313 2pff_A Fatty acid synthase sub 98.8 1.6E-08 5.6E-13 99.9 11.4 105 26-131 474-611 (1688)
314 2et6_A (3R)-hydroxyacyl-COA de 98.8 1.5E-07 5E-12 87.7 16.8 106 26-133 6-136 (604)
315 1smk_A Malate dehydrogenase, g 98.8 2.1E-08 7.2E-13 86.3 9.0 107 27-137 7-119 (326)
316 1b8p_A Protein (malate dehydro 98.7 1.9E-08 6.6E-13 86.7 5.8 105 28-136 5-126 (329)
317 1lu9_A Methylene tetrahydromet 98.6 4.7E-08 1.6E-12 82.7 5.0 76 26-102 117-198 (287)
318 2vz8_A Fatty acid synthase; tr 98.5 5E-07 1.7E-11 96.1 10.8 119 27-146 1883-2022(2512)
319 1hye_A L-lactate/malate dehydr 98.5 5.1E-07 1.7E-11 77.2 8.6 99 29-134 1-114 (313)
320 1ff9_A Saccharopine reductase; 98.4 5.3E-07 1.8E-11 80.9 8.1 103 27-134 2-116 (450)
321 3llv_A Exopolyphosphatase-rela 98.4 2E-07 6.8E-12 70.0 4.4 69 28-98 6-76 (141)
322 2gk4_A Conserved hypothetical 98.4 8.9E-07 3E-11 71.5 8.3 74 27-103 2-95 (232)
323 1o6z_A MDH, malate dehydrogena 98.4 1E-07 3.6E-12 81.1 2.9 100 29-138 1-114 (303)
324 2hmt_A YUAA protein; RCK, KTN, 98.4 3.3E-07 1.1E-11 68.8 5.2 72 27-100 5-78 (144)
325 1id1_A Putative potassium chan 98.4 7.7E-07 2.6E-11 67.8 7.0 71 27-99 2-78 (153)
326 3abi_A Putative uncharacterize 98.3 7.7E-07 2.6E-11 77.8 7.2 71 28-101 16-86 (365)
327 2g1u_A Hypothetical protein TM 98.3 2.7E-06 9.1E-11 64.9 8.2 71 27-99 18-91 (155)
328 2axq_A Saccharopine dehydrogen 98.2 1.2E-06 4.2E-11 78.8 6.2 75 27-102 22-98 (467)
329 1lss_A TRK system potassium up 98.2 1.3E-06 4.6E-11 65.0 4.6 70 28-99 4-76 (140)
330 3fwz_A Inner membrane protein 98.2 2.8E-06 9.6E-11 63.6 5.7 69 27-97 6-76 (140)
331 1mld_A Malate dehydrogenase; o 98.1 8.4E-06 2.9E-10 69.6 8.5 106 29-140 1-114 (314)
332 4ina_A Saccharopine dehydrogen 98.1 3.7E-06 1.3E-10 74.5 5.7 71 29-101 2-85 (405)
333 5mdh_A Malate dehydrogenase; o 98.1 1.4E-06 4.9E-11 74.8 2.9 107 28-141 3-126 (333)
334 1u7z_A Coenzyme A biosynthesis 98.0 2.5E-05 8.6E-10 62.9 9.5 73 26-103 6-98 (226)
335 3zen_D Fatty acid synthase; tr 98.0 0.00015 5.2E-09 77.9 16.8 107 26-133 2134-2277(3089)
336 3fi9_A Malate dehydrogenase; s 97.9 4E-06 1.4E-10 72.2 3.2 104 27-138 7-120 (343)
337 3l4b_C TRKA K+ channel protien 97.9 7.4E-06 2.5E-10 66.1 4.2 67 29-97 1-70 (218)
338 3c85_A Putative glutathione-re 97.9 5.3E-06 1.8E-10 65.0 3.2 72 26-99 37-112 (183)
339 2z2v_A Hypothetical protein PH 97.9 2.1E-05 7.3E-10 68.5 7.3 70 27-99 15-84 (365)
340 2aef_A Calcium-gated potassium 97.8 1.2E-05 4E-10 65.7 3.9 69 27-99 8-78 (234)
341 3pqe_A L-LDH, L-lactate dehydr 97.6 0.00034 1.2E-08 59.8 9.4 102 28-140 5-119 (326)
342 4ggo_A Trans-2-enoyl-COA reduc 97.5 0.00036 1.2E-08 60.4 8.1 77 26-102 48-150 (401)
343 4h7p_A Malate dehydrogenase; s 97.4 0.00015 5.1E-09 62.4 5.0 102 25-134 21-140 (345)
344 1pqw_A Polyketide synthase; ro 97.4 6.8E-05 2.3E-09 59.4 2.7 59 27-87 38-97 (198)
345 2eez_A Alanine dehydrogenase; 97.3 0.00024 8.3E-09 62.0 5.5 73 26-101 164-238 (369)
346 3vku_A L-LDH, L-lactate dehydr 97.3 0.00036 1.2E-08 59.6 6.3 103 27-140 8-122 (326)
347 4g65_A TRK system potassium up 97.3 0.00025 8.5E-09 63.8 5.1 65 28-94 3-70 (461)
348 3l9w_A Glutathione-regulated p 97.2 0.00017 5.8E-09 63.9 3.8 68 28-97 4-73 (413)
349 1ur5_A Malate dehydrogenase; o 97.2 0.00011 3.8E-09 62.5 1.8 102 27-138 1-114 (309)
350 3gvi_A Malate dehydrogenase; N 97.2 0.0016 5.3E-08 55.6 8.9 107 26-142 5-123 (324)
351 3tnl_A Shikimate dehydrogenase 97.2 0.00069 2.4E-08 57.5 6.7 73 26-100 152-234 (315)
352 3hhp_A Malate dehydrogenase; M 97.2 0.0019 6.5E-08 54.8 9.3 106 29-140 1-115 (312)
353 3p7m_A Malate dehydrogenase; p 97.1 0.0028 9.7E-08 54.0 10.1 105 27-141 4-120 (321)
354 2hcy_A Alcohol dehydrogenase 1 97.1 0.00043 1.5E-08 59.9 5.1 72 27-100 169-246 (347)
355 3nep_X Malate dehydrogenase; h 97.1 0.0021 7.1E-08 54.6 9.1 103 29-141 1-116 (314)
356 1lnq_A MTHK channels, potassiu 97.1 0.00025 8.5E-09 61.1 3.3 68 28-98 115-183 (336)
357 4aj2_A L-lactate dehydrogenase 97.0 0.0018 6.2E-08 55.4 7.8 108 25-142 16-135 (331)
358 3tl2_A Malate dehydrogenase; c 97.0 0.0028 9.5E-08 53.9 8.7 103 28-140 8-124 (315)
359 3orq_A N5-carboxyaminoimidazol 97.0 0.0037 1.3E-07 54.6 9.8 68 26-96 10-77 (377)
360 1y6j_A L-lactate dehydrogenase 96.9 0.0039 1.3E-07 53.1 9.2 103 28-141 7-121 (318)
361 2vns_A Metalloreductase steap3 96.9 0.00075 2.6E-08 54.1 4.4 63 27-99 27-90 (215)
362 1v3u_A Leukotriene B4 12- hydr 96.9 0.0003 1E-08 60.4 2.1 38 27-65 145-182 (333)
363 1jay_A Coenzyme F420H2:NADP+ o 96.9 0.00081 2.8E-08 53.7 4.4 70 29-100 1-72 (212)
364 1oju_A MDH, malate dehydrogena 96.9 0.004 1.4E-07 52.3 8.7 103 29-141 1-116 (294)
365 3d0o_A L-LDH 1, L-lactate dehy 96.8 0.0063 2.2E-07 51.8 9.6 104 27-141 5-121 (317)
366 1dih_A Dihydrodipicolinate red 96.8 0.00031 1.1E-08 58.5 1.1 36 28-63 5-41 (273)
367 2zqz_A L-LDH, L-lactate dehydr 96.8 0.0058 2E-07 52.2 8.9 104 27-141 8-123 (326)
368 1yb5_A Quinone oxidoreductase; 96.8 0.00065 2.2E-08 58.9 3.1 39 27-66 170-208 (351)
369 3don_A Shikimate dehydrogenase 96.7 0.0026 8.9E-08 53.0 6.4 66 27-99 116-182 (277)
370 3ldh_A Lactate dehydrogenase; 96.7 0.0068 2.3E-07 51.6 8.9 104 27-141 20-136 (330)
371 2x0j_A Malate dehydrogenase; o 96.7 0.011 3.7E-07 49.6 9.9 102 29-140 1-115 (294)
372 3oj0_A Glutr, glutamyl-tRNA re 96.7 0.00016 5.5E-09 54.1 -1.2 66 28-100 21-88 (144)
373 1qor_A Quinone oxidoreductase; 96.7 0.00039 1.3E-08 59.6 1.1 38 27-65 140-177 (327)
374 2pv7_A T-protein [includes: ch 96.7 0.0028 9.5E-08 53.5 6.3 37 27-64 20-56 (298)
375 4f3y_A DHPR, dihydrodipicolina 96.7 0.0015 5.1E-08 54.2 4.5 37 28-64 7-44 (272)
376 2j3h_A NADP-dependent oxidored 96.7 0.00088 3E-08 57.8 3.1 39 27-66 155-193 (345)
377 1pzg_A LDH, lactate dehydrogen 96.7 0.00065 2.2E-08 58.3 2.3 105 28-139 9-128 (331)
378 3gg2_A Sugar dehydrogenase, UD 96.6 0.00073 2.5E-08 60.5 2.3 37 27-65 1-37 (450)
379 1wly_A CAAR, 2-haloacrylate re 96.6 0.00058 2E-08 58.6 1.6 38 27-65 145-182 (333)
380 4e4t_A Phosphoribosylaminoimid 96.6 0.004 1.4E-07 55.2 7.0 68 27-97 34-101 (419)
381 4b7c_A Probable oxidoreductase 96.6 0.0011 3.7E-08 57.0 3.1 56 27-84 149-206 (336)
382 1iz0_A Quinone oxidoreductase; 96.6 0.0021 7.3E-08 54.3 4.8 72 27-101 125-197 (302)
383 3q2o_A Phosphoribosylaminoimid 96.6 0.0099 3.4E-07 52.1 9.2 67 27-96 13-79 (389)
384 2hjs_A USG-1 protein homolog; 96.5 0.0029 1E-07 54.4 5.5 34 27-60 5-40 (340)
385 3k5i_A Phosphoribosyl-aminoimi 96.5 0.0064 2.2E-07 53.6 7.8 65 28-95 24-89 (403)
386 1ez4_A Lactate dehydrogenase; 96.5 0.0065 2.2E-07 51.7 7.4 103 29-142 6-120 (318)
387 2j8z_A Quinone oxidoreductase; 96.5 0.0008 2.7E-08 58.3 1.8 39 27-66 162-200 (354)
388 3t4e_A Quinate/shikimate dehyd 96.5 0.005 1.7E-07 52.2 6.6 72 26-99 146-227 (312)
389 1ldn_A L-lactate dehydrogenase 96.5 0.0074 2.5E-07 51.3 7.8 103 27-140 5-120 (316)
390 1pjc_A Protein (L-alanine dehy 96.5 0.0012 4.1E-08 57.4 2.8 71 27-102 166-240 (361)
391 1lld_A L-lactate dehydrogenase 96.5 0.016 5.4E-07 49.2 9.6 101 27-137 6-118 (319)
392 3jyo_A Quinate/shikimate dehyd 96.4 0.004 1.4E-07 52.1 5.7 69 26-99 125-201 (283)
393 2zb4_A Prostaglandin reductase 96.4 0.0013 4.3E-08 57.1 2.5 36 29-65 162-198 (357)
394 2v6b_A L-LDH, L-lactate dehydr 96.4 0.01 3.5E-07 50.1 8.1 99 29-138 1-111 (304)
395 1guz_A Malate dehydrogenase; o 96.4 0.0013 4.6E-08 55.8 2.5 101 29-138 1-113 (310)
396 4gbj_A 6-phosphogluconate dehy 96.4 0.002 6.8E-08 54.4 3.4 40 25-66 2-41 (297)
397 2hjr_A Malate dehydrogenase; m 96.3 0.015 5.1E-07 49.7 8.7 101 27-138 13-126 (328)
398 2vhw_A Alanine dehydrogenase; 96.3 0.0021 7.3E-08 56.1 3.3 73 26-101 166-240 (377)
399 1ys4_A Aspartate-semialdehyde 96.3 0.004 1.4E-07 53.9 5.0 35 27-61 7-41 (354)
400 2xxj_A L-LDH, L-lactate dehydr 96.3 0.019 6.4E-07 48.7 9.0 102 29-141 1-114 (310)
401 2nqt_A N-acetyl-gamma-glutamyl 96.3 0.0036 1.2E-07 54.0 4.6 35 28-62 9-48 (352)
402 1p9o_A Phosphopantothenoylcyst 96.3 0.013 4.4E-07 49.4 7.8 63 27-90 35-134 (313)
403 4ffl_A PYLC; amino acid, biosy 96.3 0.016 5.6E-07 50.1 8.8 65 28-95 1-66 (363)
404 2eih_A Alcohol dehydrogenase; 96.3 0.0023 7.9E-08 55.1 3.3 39 27-66 166-204 (343)
405 3c24_A Putative oxidoreductase 96.2 0.0038 1.3E-07 52.3 4.3 38 27-65 10-47 (286)
406 2egg_A AROE, shikimate 5-dehyd 96.2 0.0013 4.6E-08 55.4 1.5 71 26-102 139-214 (297)
407 1a5z_A L-lactate dehydrogenase 96.2 0.0066 2.3E-07 51.7 5.8 98 29-137 1-110 (319)
408 3pp8_A Glyoxylate/hydroxypyruv 96.2 0.014 4.9E-07 49.5 7.7 61 25-95 136-196 (315)
409 1edz_A 5,10-methylenetetrahydr 96.1 0.0096 3.3E-07 50.4 6.4 76 25-101 174-254 (320)
410 3doj_A AT3G25530, dehydrogenas 96.1 0.0061 2.1E-07 51.7 5.2 37 28-66 21-57 (310)
411 7mdh_A Protein (malate dehydro 96.1 0.077 2.6E-06 45.9 12.0 105 28-139 32-154 (375)
412 2ewd_A Lactate dehydrogenase,; 96.1 0.015 5.2E-07 49.4 7.6 100 28-137 4-115 (317)
413 4dup_A Quinone oxidoreductase; 96.1 0.0018 6.2E-08 56.0 1.8 39 27-66 167-205 (353)
414 3ax6_A Phosphoribosylaminoimid 96.1 0.023 8E-07 49.4 8.8 66 29-97 2-67 (380)
415 3qwb_A Probable quinone oxidor 96.0 0.0024 8.3E-08 54.7 2.3 39 27-66 148-186 (334)
416 1t2d_A LDH-P, L-lactate dehydr 96.0 0.0022 7.5E-08 54.7 1.8 103 29-139 5-122 (322)
417 3pef_A 6-phosphogluconate dehy 96.0 0.0066 2.3E-07 50.8 4.8 36 29-66 2-37 (287)
418 1xyg_A Putative N-acetyl-gamma 96.0 0.0072 2.5E-07 52.3 5.0 36 28-63 16-51 (359)
419 3jyn_A Quinone oxidoreductase; 95.9 0.0018 6.1E-08 55.4 1.0 39 27-66 140-178 (325)
420 2ozp_A N-acetyl-gamma-glutamyl 95.9 0.0076 2.6E-07 51.9 4.9 36 28-63 4-39 (345)
421 3p2o_A Bifunctional protein fo 95.9 0.018 6.3E-07 47.6 6.8 56 25-101 157-212 (285)
422 1vpd_A Tartronate semialdehyde 95.9 0.0048 1.6E-07 51.9 3.5 37 27-65 4-40 (299)
423 4dll_A 2-hydroxy-3-oxopropiona 95.9 0.0072 2.5E-07 51.5 4.6 38 27-66 30-67 (320)
424 3qha_A Putative oxidoreductase 95.9 0.0066 2.2E-07 51.1 4.3 37 28-66 15-51 (296)
425 1yqd_A Sinapyl alcohol dehydro 95.9 0.012 4.3E-07 51.0 6.1 72 27-101 187-260 (366)
426 1p9l_A Dihydrodipicolinate red 95.8 0.011 3.6E-07 48.3 5.2 63 29-92 1-64 (245)
427 1kjq_A GART 2, phosphoribosylg 95.8 0.051 1.7E-06 47.4 10.0 63 27-92 10-72 (391)
428 3gms_A Putative NADPH:quinone 95.8 0.0035 1.2E-07 53.9 2.3 39 27-66 144-182 (340)
429 3evt_A Phosphoglycerate dehydr 95.8 0.017 5.7E-07 49.3 6.4 63 25-97 134-196 (324)
430 3u62_A Shikimate dehydrogenase 95.8 0.012 4.2E-07 48.2 5.3 66 27-100 108-174 (253)
431 3d4o_A Dipicolinate synthase s 95.7 0.011 3.9E-07 49.6 5.0 68 25-99 152-220 (293)
432 3hg7_A D-isomer specific 2-hyd 95.7 0.022 7.4E-07 48.5 6.6 62 25-96 137-198 (324)
433 1wwk_A Phosphoglycerate dehydr 95.7 0.013 4.5E-07 49.5 5.3 63 25-97 139-201 (307)
434 4g2n_A D-isomer specific 2-hyd 95.7 0.019 6.5E-07 49.3 6.3 62 25-96 170-231 (345)
435 3p2y_A Alanine dehydrogenase/p 95.7 0.0083 2.8E-07 52.1 4.0 72 27-100 183-273 (381)
436 1nyt_A Shikimate 5-dehydrogena 95.6 0.0091 3.1E-07 49.6 4.2 38 26-65 117-154 (271)
437 2rir_A Dipicolinate synthase, 95.6 0.012 4E-07 49.7 4.8 68 25-99 154-222 (300)
438 4a5o_A Bifunctional protein fo 95.6 0.029 1E-06 46.4 7.0 56 25-101 158-213 (286)
439 4a26_A Putative C-1-tetrahydro 95.6 0.028 9.5E-07 46.9 6.8 55 26-101 163-219 (300)
440 1jvb_A NAD(H)-dependent alcoho 95.6 0.0035 1.2E-07 54.0 1.5 39 27-66 170-209 (347)
441 3l07_A Bifunctional protein fo 95.6 0.031 1.1E-06 46.3 7.0 56 25-101 158-213 (285)
442 3gvx_A Glycerate dehydrogenase 95.6 0.013 4.3E-07 49.2 4.7 60 25-97 119-178 (290)
443 4dio_A NAD(P) transhydrogenase 95.6 0.017 5.7E-07 50.6 5.6 73 27-101 189-284 (405)
444 3ngx_A Bifunctional protein fo 95.5 0.028 9.7E-07 46.3 6.6 54 26-100 148-201 (276)
445 3dr3_A N-acetyl-gamma-glutamyl 95.5 0.012 4.1E-07 50.3 4.5 35 29-63 5-39 (337)
446 2d4a_B Malate dehydrogenase; a 95.5 0.043 1.5E-06 46.4 7.9 102 30-141 1-114 (308)
447 3l6d_A Putative oxidoreductase 95.5 0.0062 2.1E-07 51.6 2.7 38 27-66 8-45 (306)
448 2cuk_A Glycerate dehydrogenase 95.5 0.022 7.4E-07 48.3 6.0 57 25-96 141-197 (311)
449 2g76_A 3-PGDH, D-3-phosphoglyc 95.5 0.02 6.7E-07 49.0 5.8 63 25-97 162-224 (335)
450 2ekl_A D-3-phosphoglycerate de 95.5 0.017 5.7E-07 49.0 5.3 63 25-97 139-201 (313)
451 2raf_A Putative dinucleotide-b 95.4 0.051 1.8E-06 43.0 7.7 36 27-64 18-53 (209)
452 2h78_A Hibadh, 3-hydroxyisobut 95.4 0.0053 1.8E-07 51.8 1.9 36 29-66 4-39 (302)
453 2cdc_A Glucose dehydrogenase g 95.4 0.0071 2.4E-07 52.5 2.7 35 27-63 180-214 (366)
454 4g65_A TRK system potassium up 95.4 0.026 9E-07 50.6 6.4 65 27-94 234-302 (461)
455 3ouz_A Biotin carboxylase; str 95.3 0.027 9.2E-07 50.3 6.3 69 24-94 2-78 (446)
456 1l7d_A Nicotinamide nucleotide 95.3 0.025 8.6E-07 49.4 6.0 72 27-100 171-265 (384)
457 2ph5_A Homospermidine synthase 95.3 0.011 3.6E-07 52.7 3.5 72 28-100 13-91 (480)
458 3qy9_A DHPR, dihydrodipicolina 95.3 0.12 4.2E-06 41.9 9.6 63 28-94 3-74 (243)
459 1t4b_A Aspartate-semialdehyde 95.3 0.027 9.3E-07 48.8 6.1 34 29-62 2-38 (367)
460 2vn8_A Reticulon-4-interacting 95.3 0.02 6.8E-07 49.8 5.3 72 27-101 183-257 (375)
461 3gg9_A D-3-phosphoglycerate de 95.3 0.01 3.6E-07 51.1 3.4 63 25-96 157-219 (352)
462 3fbt_A Chorismate mutase and s 95.3 0.017 5.8E-07 48.1 4.5 65 27-100 121-186 (282)
463 3pdu_A 3-hydroxyisobutyrate de 95.3 0.0079 2.7E-07 50.3 2.5 36 29-66 2-37 (287)
464 1mv8_A GMD, GDP-mannose 6-dehy 95.2 0.0037 1.3E-07 55.8 0.4 36 29-66 1-36 (436)
465 3dtt_A NADP oxidoreductase; st 95.2 0.016 5.5E-07 47.2 4.1 39 25-65 16-54 (245)
466 1gdh_A D-glycerate dehydrogena 95.2 0.019 6.6E-07 48.8 4.7 64 25-97 143-207 (320)
467 1rjw_A ADH-HT, alcohol dehydro 95.2 0.014 4.7E-07 50.1 3.8 71 27-100 164-238 (339)
468 2i6t_A Ubiquitin-conjugating e 95.2 0.13 4.5E-06 43.2 9.8 99 28-139 14-121 (303)
469 2r00_A Aspartate-semialdehyde 95.2 0.019 6.6E-07 49.2 4.7 34 28-61 3-38 (336)
470 4dgs_A Dehydrogenase; structur 95.2 0.029 1E-06 48.0 5.8 59 25-96 168-226 (340)
471 3i83_A 2-dehydropantoate 2-red 95.2 0.02 7E-07 48.7 4.8 35 27-63 1-35 (320)
472 2yq5_A D-isomer specific 2-hyd 95.1 0.035 1.2E-06 47.6 6.2 60 25-96 145-204 (343)
473 2hk9_A Shikimate dehydrogenase 95.1 0.009 3.1E-07 49.7 2.4 64 27-99 128-193 (275)
474 1jw9_B Molybdopterin biosynthe 95.1 0.043 1.5E-06 44.8 6.5 35 27-63 30-65 (249)
475 4e21_A 6-phosphogluconate dehy 95.1 0.013 4.4E-07 50.7 3.5 37 28-66 22-58 (358)
476 3pi7_A NADH oxidoreductase; gr 95.1 0.0098 3.4E-07 51.3 2.7 72 28-101 165-242 (349)
477 1hyh_A L-hicdh, L-2-hydroxyiso 95.1 0.054 1.8E-06 45.8 7.3 99 29-136 2-115 (309)
478 4gx0_A TRKA domain protein; me 95.1 0.035 1.2E-06 51.2 6.5 61 29-94 349-410 (565)
479 2ew2_A 2-dehydropantoate 2-red 95.1 0.015 5E-07 49.1 3.7 36 28-65 3-38 (316)
480 4eye_A Probable oxidoreductase 95.1 0.02 7E-07 49.1 4.7 39 27-66 159-197 (342)
481 4hy3_A Phosphoglycerate oxidor 95.1 0.022 7.5E-07 49.3 4.8 62 25-96 173-234 (365)
482 2gcg_A Glyoxylate reductase/hy 95.1 0.041 1.4E-06 47.0 6.5 63 25-97 152-215 (330)
483 2dwc_A PH0318, 433AA long hypo 95.0 0.072 2.5E-06 47.2 8.3 62 27-91 18-79 (433)
484 3cky_A 2-hydroxymethyl glutara 95.0 0.01 3.4E-07 50.0 2.5 37 28-66 4-40 (301)
485 3gaz_A Alcohol dehydrogenase s 95.0 0.013 4.6E-07 50.3 3.4 37 27-65 150-186 (343)
486 1b0a_A Protein (fold bifunctio 95.0 0.061 2.1E-06 44.6 7.1 55 26-101 157-211 (288)
487 2pi1_A D-lactate dehydrogenase 95.0 0.021 7.1E-07 48.9 4.5 60 25-95 138-197 (334)
488 3ba1_A HPPR, hydroxyphenylpyru 95.0 0.026 8.7E-07 48.3 5.0 60 25-97 161-220 (333)
489 2gf2_A Hibadh, 3-hydroxyisobut 95.0 0.019 6.5E-07 48.1 4.0 35 30-66 2-36 (296)
490 3aw8_A PURK, phosphoribosylami 95.0 0.062 2.1E-06 46.5 7.4 63 30-96 1-63 (369)
491 4huj_A Uncharacterized protein 94.9 0.011 3.6E-07 47.5 2.3 37 28-66 23-60 (220)
492 2ep5_A 350AA long hypothetical 94.9 0.025 8.7E-07 48.7 4.7 33 28-60 4-36 (350)
493 1p77_A Shikimate 5-dehydrogena 94.9 0.017 5.7E-07 48.0 3.4 38 27-66 118-155 (272)
494 3tqh_A Quinone oxidoreductase; 94.9 0.0067 2.3E-07 51.7 1.0 73 27-101 152-224 (321)
495 2uyy_A N-PAC protein; long-cha 94.9 0.024 8.1E-07 48.1 4.4 36 29-66 31-66 (316)
496 1x13_A NAD(P) transhydrogenase 94.9 0.036 1.2E-06 48.7 5.6 72 27-100 171-263 (401)
497 1gpj_A Glutamyl-tRNA reductase 94.8 0.011 3.7E-07 52.2 2.2 67 26-99 165-234 (404)
498 1qp8_A Formate dehydrogenase; 94.8 0.042 1.4E-06 46.3 5.7 57 25-95 121-177 (303)
499 3jtm_A Formate dehydrogenase, 94.8 0.029 9.9E-07 48.3 4.7 63 25-96 161-224 (351)
500 1yb4_A Tartronic semialdehyde 94.8 0.02 6.9E-07 47.9 3.6 34 29-65 4-37 (295)
No 1
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=100.00 E-value=9.3e-33 Score=243.63 Aligned_cols=262 Identities=39% Similarity=0.731 Sum_probs=198.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC-----CeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc---cCceeEEe
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN-----WKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHIF 100 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~~ 100 (303)
|+|||||||||||++|+++|+ +.| ++|++++|++........+++++.+|+.|.+++.+++++ +|.|+|++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~-~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a 80 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILP-LADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT 80 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTT-STTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHH-hCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence 689999999999999999999 678 999999998765433345789999999999999999998 78899997
Q ss_pred ecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccc--ccCCcCcCCCCCCCCccch
Q 042242 101 WVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEK--QVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~--~~~~~~e~~~~~p~~~~~~ 178 (303)
+... . ++.+.++.|+.++.+++++|++..+++.+++..+|..+|.++..+||.. ...+++|+++..| .++.|
T Consensus 81 ~~~~--~---~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~-~~~~y 154 (364)
T 2v6g_A 81 WANR--S---TEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLK-YMNFY 154 (364)
T ss_dssp CCCC--S---SHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCS-SCCHH
T ss_pred CCCc--c---hHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCc-cchhh
Confidence 7542 1 2334789999999999999998644577777655555565555556542 2357788877653 23455
Q ss_pred HHHHHHHHHHhc-CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHH
Q 042242 179 YVLEDLLKEKLA-GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAE 256 (303)
Q Consensus 179 y~~~k~~~e~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~ 256 (303)
|..|+.+.++.. .. ++++++||+.|||++.....+.......+..+.+..+.++.++|....+ +.+++++|++|+|+
T Consensus 155 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~-~~~~~~~~v~Dva~ 233 (364)
T 2v6g_A 155 YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAW-DGYSDCSDADLIAE 233 (364)
T ss_dssp HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHH-HSCBCCEEHHHHHH
T ss_pred HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccc-cccCCCCcHHHHHH
Confidence 777888877654 23 8999999999999765433232222222222321235666667887777 88999999999999
Q ss_pred HHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 257 QHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 257 a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+++.++..+... |++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 234 a~~~~~~~~~~~---g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 275 (364)
T 2v6g_A 234 HHIWAAVDPYAK---NEAFNVSNGDVFKWKHFWKVLAEQFGVECG 275 (364)
T ss_dssp HHHHHHHCGGGT---TEEEEECCSCCBCHHHHHHHHHHHHTCCBC
T ss_pred HHHHHHhCCCCC---CceEEecCCCcCCHHHHHHHHHHHhCCCCC
Confidence 999998876433 389999999999999999999999997643
No 2
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=100.00 E-value=6e-33 Score=243.75 Aligned_cols=251 Identities=18% Similarity=0.141 Sum_probs=189.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-----c-C------CCeEEEEecCCCHHHHHHHHhcc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-----Q-S------SSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~-~------~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
+++|+|||||||||||++|+++|+ +.|++|++++|++..... . . .+++++.+|+.|.+++.++++++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLL-KLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 356899999999999999999999 689999999997654220 0 0 68999999999999999999999
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
|.|+|+++.........++.+.+++|+.++.+++++|++.. +.+++++|+..+|+.. ...+++|+++..|.
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg~~-------~~~~~~E~~~~~p~ 172 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYGDH-------PALPKVEENIGNPL 172 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTC-------CCSSBCTTCCCCCC
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcCCC-------CCCCCccCCCCCCC
Confidence 99999987644433444555688999999999999999873 4566777766677554 24578898887766
Q ss_pred CccchHHHHHHHHHH-----h--cCCcceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhhc
Q 042242 174 SNNFYYVLEDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEYC 245 (303)
Q Consensus 174 ~~~~~y~~~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 245 (303)
++ |+.+|...|. . .+ ++++++||+.|||++......+...+..+.. +.+ +.++.+.|.. ...
T Consensus 173 ~~---Y~~sK~~~E~~~~~~~~~~g-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~g----~~~ 242 (351)
T 3ruf_A 173 SP---YAVTKYVNEIYAQVYARTYG-FKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLK--GDDVYINGDG----ETS 242 (351)
T ss_dssp SH---HHHHHHHHHHHHHHHHHHHC-CCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHH--TCCCEEESSS----CCE
T ss_pred Ch---hHHHHHHHHHHHHHHHHHhC-CCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHc--CCCcEEeCCC----CeE
Confidence 66 8888877762 2 24 9999999999999764422111011111111 222 3444444433 566
Q ss_pred ccCccHHHHHHHHHHHhcCc-CCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 246 LDGSDSRLVAEQHIWVATND-DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 246 ~~~~~~~d~a~a~~~~~~~~-~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
.++++++|+|++++.++..+ ... +++||+++++.+|+.|+++.+++.+|++
T Consensus 243 ~~~i~v~Dva~a~~~~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 294 (351)
T 3ruf_A 243 RDFCYIDNVIQMNILSALAKDSAK---DNIYNVAVGDRTTLNELSGYIYDELNLI 294 (351)
T ss_dssp ECCEEHHHHHHHHHHHHTCCGGGC---SEEEEESCSCCEEHHHHHHHHHHHHHTT
T ss_pred EeeEEHHHHHHHHHHHHhhccccC---CCEEEeCCCCcccHHHHHHHHHHHhCcc
Confidence 78999999999999988873 333 4899999999999999999999999983
No 3
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=100.00 E-value=4.1e-32 Score=234.60 Aligned_cols=242 Identities=14% Similarity=0.122 Sum_probs=182.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS 106 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~ 106 (303)
|+++|||||||||||++|+++|+ +.|++|++++|++.... ..+++++.+|+. .+++.++++++|.|+|+++.....
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~--~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~ 76 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIK-NDGNTPIILTRSIGNKA--INDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ 76 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCC-------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-hCCCEEEEEeCCCCccc--CCceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence 56899999999999999999999 68999999999944332 348899999999 999999999999999998764433
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
++.+.++.|+.++.+++++|++.+ +.+++++|+..+|+.. ...+++|+++..|.++ |+.+|...
T Consensus 77 ----~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vyg~~-------~~~~~~E~~~~~p~~~---Y~~sK~~~ 140 (311)
T 3m2p_A 77 ----GKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAYSDE-------TSLPWNEKELPLPDLM---YGVSKLAC 140 (311)
T ss_dssp ----SCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCCCG-------GGCSBCTTSCCCCSSH---HHHHHHHH
T ss_pred ----ChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhCCC-------CCCCCCCCCCCCCCch---hHHHHHHH
Confidence 222368999999999999999863 4466666666677544 2467889888776666 88888777
Q ss_pred HH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHH
Q 042242 187 EK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIW 260 (303)
Q Consensus 187 e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~ 260 (303)
|. .... ++++++||+.+||++.... .+...+. ..+. .+.++.+.|.. ....++++++|+|++++.
T Consensus 141 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~--~~~~--~~~~~~~~g~~----~~~~~~v~v~Dva~a~~~ 211 (311)
T 3m2p_A 141 EHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFF--RQAF--HGEQLTLHANS----VAKREFLYAKDAAKSVIY 211 (311)
T ss_dssp HHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHH--HHHH--TCCCEEESSBC----CCCEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHH--HHHH--cCCCeEEecCC----CeEEceEEHHHHHHHHHH
Confidence 62 2212 9999999999999754421 2212211 1122 25566665544 456678999999999999
Q ss_pred HhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 261 VATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 261 ~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++..+. . +++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 212 ~~~~~~-~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 248 (311)
T 3m2p_A 212 ALKQEK-V---SGTFNIGSGDALTNYEVANTINNAFGNKDN 248 (311)
T ss_dssp HTTCTT-C---CEEEEECCSCEECHHHHHHHHHHHTTCTTC
T ss_pred HHhcCC-C---CCeEEeCCCCcccHHHHHHHHHHHhCCCCc
Confidence 988775 3 389999999999999999999999998754
No 4
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=100.00 E-value=3.1e-32 Score=241.05 Aligned_cols=262 Identities=13% Similarity=0.208 Sum_probs=188.7
Q ss_pred cCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCC-CHHHHHHHHhccCceeE
Q 042242 22 GREVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLL-NPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 22 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~-~~~~l~~~~~~~~~V~~ 98 (303)
....+++|+|||||||||||++|+++|++..||+|++++|++.+.. ...++++++.+|++ |.+.+.++++++|.|+|
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 3445567899999999999999999999434899999999876543 22468999999999 99999999999999999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC---C-CC
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV---S-KS 174 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~---p-~~ 174 (303)
+|+.........++.+.+++|+.++.+++++|++.+ .+++++|+..+|+... ..++.|+++.. | ..
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS~~vyg~~~-------~~~~~e~~~~~~~~p~~~ 167 (372)
T 3slg_A 98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGMCA-------DEQFDPDASALTYGPINK 167 (372)
T ss_dssp CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECCGGGGBSCC-------CSSBCTTTCCEEECCTTC
T ss_pred cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCcHHHhCCCC-------CCCCCccccccccCCCCC
Confidence 987654433334455688999999999999999875 5777777777886542 34566666431 1 12
Q ss_pred ccchHHHHHHHHHH-----hc-CCcceEEecCCceeecCCCCccc----hhhHHHHHHH-HhhhCCCceeeCCchhhhhh
Q 042242 175 NNFYYVLEDLLKEK-----LA-GKVAWSVHRPGLLLGSSHRSLYN----FLGCLCVYGA-VCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 175 ~~~~y~~~k~~~e~-----~~-~~~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~ 243 (303)
|...|+.+|...|. .. + ++++++||+.|||++...... ....+..+.. +.+ +.++.+.+.. .
T Consensus 168 p~~~Y~~sK~~~E~~~~~~~~~g-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g----~ 240 (372)
T 3slg_A 168 PRWIYACSKQLMDRVIWGYGMEG-LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR--GENISLVDGG----S 240 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHH--TCCEEEGGGG----C
T ss_pred CCCcHHHHHHHHHHHHHHHHHCC-CCEEEEccccccCCCcccccccccccchHHHHHHHHHHc--CCCcEEeCCC----c
Confidence 33348888887772 11 4 999999999999976432110 0011111111 222 4555655543 5
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC-CCccHHhhHHHHHHHhcccCC
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING-PRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~-~~~s~~e~~~~i~~~~g~~~~ 301 (303)
...++++++|+|++++.++..+... ..+++||++++ +.+|+.|+++.+++.+|++.+
T Consensus 241 ~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 241 QKRAFTYVDDGISALMKIIENSNGV-ATGKIYNIGNPNNNFSVRELANKMLELAAEFPE 298 (372)
T ss_dssp CEEECEEHHHHHHHHHHHHHCGGGT-TTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTT
T ss_pred eEEEEEEHHHHHHHHHHHHhcccCc-CCCceEEeCCCCCCccHHHHHHHHHHHhCCCcc
Confidence 6678999999999999999877521 12489999994 899999999999999998754
No 5
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=100.00 E-value=7.7e-32 Score=236.21 Aligned_cols=249 Identities=12% Similarity=0.070 Sum_probs=182.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc--cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL--LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~--~~~ 95 (303)
++|+|||||||||||++|+++|+ +.| ++|++++|...... ...++++++.+|+.|.+.+.+++++ +|.
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYML-QSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHH-HHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred CCCeEEEECCccHHHHHHHHHHH-hhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 35799999999999999999999 566 78999888653221 1125899999999999999999998 788
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
|+|+++.........++.+.+++|+.++.+++++|++.+ ..+++++|+..+|+.... ..+++|+++..|..+
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vy~~~~~------~~~~~E~~~~~p~~~ 173 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP--HIKLVQVSTDEVYGSLGK------TGRFTEETPLAPNSP 173 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHST--TSEEEEEEEGGGGCCCCS------SCCBCTTSCCCCCSH
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeCchHHhCCCCc------CCCcCCCCCCCCCCh
Confidence 999987655444444555689999999999999999873 456666676668865422 457889888877777
Q ss_pred cchHHHHHHHHHH-----h--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccC
Q 042242 176 NFYYVLEDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 176 ~~~y~~~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (303)
|+.+|...|. . .+ ++++++||+.|||++.... .+...+ ...+.. +.++.+.|.. ....++
T Consensus 174 ---Y~~sK~~~E~~~~~~~~~~g-~~~~ilRp~~v~G~~~~~~-~~~~~~--~~~~~~--~~~~~~~~~~----~~~~~~ 240 (346)
T 4egb_A 174 ---YSSSKASADMIALAYYKTYQ-LPVIVTRCSNNYGPYQYPE-KLIPLM--VTNALE--GKKLPLYGDG----LNVRDW 240 (346)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHC-CCEEEEEECEEESTTCCTT-SHHHHH--HHHHHT--TCCCEEETTS----CCEECE
T ss_pred ---hHHHHHHHHHHHHHHHHHhC-CCEEEEeecceeCcCCCcc-chHHHH--HHHHHc--CCCceeeCCC----CeEEee
Confidence 8888877762 2 24 9999999999999754321 221111 111222 4444444433 566789
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++++|+|++++.++..+. . |++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 241 i~v~Dva~a~~~~~~~~~-~---g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 289 (346)
T 4egb_A 241 LHVTDHCSAIDVVLHKGR-V---GEVYNIGGNNEKTNVEVVEQIITLLGKTKK 289 (346)
T ss_dssp EEHHHHHHHHHHHHHHCC-T---TCEEEECCSCCEEHHHHHHHHHHHHTCCGG
T ss_pred EEHHHHHHHHHHHHhcCC-C---CCEEEECCCCceeHHHHHHHHHHHhCCCcc
Confidence 999999999999988765 3 379999999999999999999999998754
No 6
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=100.00 E-value=1e-31 Score=235.53 Aligned_cols=251 Identities=14% Similarity=0.098 Sum_probs=182.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTW 104 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~ 104 (303)
..++|+|||||||||||++|+++|+ +.|++|++++|++.. .+++++.+|+.|.+++.++++++|.|+|+++...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~-~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~ 89 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALR-TQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMS 89 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHH-HTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHH-hCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCcccC
Confidence 3356899999999999999999999 689999999998754 5788999999999999999999999999987644
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
...... .+.+++|+.++.+++++|++.. ..+++++|+..+|+.... ...++.|+++..|.++ |+.+|.
T Consensus 90 ~~~~~~--~~~~~~nv~~~~~ll~a~~~~~--~~~~V~~SS~~vyg~~~~-----~~~~~~E~~~~~~~~~---Y~~sK~ 157 (347)
T 4id9_A 90 WAPADR--DRMFAVNVEGTRRLLDAASAAG--VRRFVFASSGEVYPENRP-----EFLPVTEDHPLCPNSP---YGLTKL 157 (347)
T ss_dssp SSGGGH--HHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGTTTTSC-----SSSSBCTTSCCCCCSH---HHHHHH
T ss_pred cchhhH--HHHHHHHHHHHHHHHHHHHHcC--CCeEEEECCHHHhCCCCC-----CCCCcCCCCCCCCCCh---HHHHHH
Confidence 333333 4489999999999999998763 456677777678865311 2557888888776666 888888
Q ss_pred HHHH-----hcCC-cceEEecCCcee-------------ecCCCCccc-------hhhHHHHHHHHhhhCCCceeeCCch
Q 042242 185 LKEK-----LAGK-VAWSVHRPGLLL-------------GSSHRSLYN-------FLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 185 ~~e~-----~~~~-~~~~ilRp~~v~-------------G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
..|. .... ++++++||+.+| |++...... ....+..+.. ....+.++...|..
T Consensus 158 ~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~ 236 (347)
T 4id9_A 158 LGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQ-SRDIGEPSHILARN 236 (347)
T ss_dssp HHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHH-HHCCSSCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHH-HHHcCCCeEEeCCC
Confidence 7772 2222 999999999999 643211000 0001111111 11124454444433
Q ss_pred hhhhhhcccC----ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 239 EIWEEYCLDG----SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 239 ~~~~~~~~~~----~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
....++ ++++|+|++++.++..+...+ ++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 237 ----~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~---~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 296 (347)
T 4id9_A 237 ----ENGRPFRMHITDTRDMVAGILLALDHPEAAG---GTFNLGADEPADFAALLPKIAALTGLPIV 296 (347)
T ss_dssp ----TTCCBCEECEEEHHHHHHHHHHHHHCGGGTT---EEEEESCSSCEEHHHHHHHHHHHHCCCEE
T ss_pred ----CcccCCccCcEeHHHHHHHHHHHhcCcccCC---CeEEECCCCcccHHHHHHHHHHHhCCCCc
Confidence 333455 999999999999998875433 89999999999999999999999998654
No 7
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=100.00 E-value=2.7e-31 Score=229.62 Aligned_cols=245 Identities=16% Similarity=0.100 Sum_probs=179.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc-cccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE-ITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
|+|||||||||||++|+++|+ +.| .+++++++.. .......+++++.+|+.+ +++.++++++|.|+|+++......
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~-~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLS-ESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRI 78 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHT-TTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-
T ss_pred CEEEEECCCchHHHHHHHHHH-hCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhh
Confidence 589999999999999999999 577 5555555443 333345678999999999 889999999999999987654444
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
+..++.+.+++|+.++.++++++++.. ..+++++|+..+|+.. ...++.|+.+..|.++ |+.+|...|
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~vyg~~-------~~~~~~E~~~~~~~~~---Y~~sK~~~e 146 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAG--VSRIVFTSTSTVYGEA-------KVIPTPEDYPTHPISL---YGASKLACE 146 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGGCSC-------SSSSBCTTSCCCCCSH---HHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeCchHHhCcC-------CCCCCCCCCCCCCCCH---HHHHHHHHH
Confidence 444445589999999999999998763 4467777777777654 2456888887766666 888887776
Q ss_pred H-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 188 K-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 188 ~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
. .... ++++++||+.|||++... ..+..+ ...+.+ ...++...|.. .+..++++++|+|++++.+
T Consensus 147 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~--~~~~~~-~~~~~~~~~~g----~~~~~~i~v~Dva~a~~~~ 217 (313)
T 3ehe_A 147 ALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDF--IMKLKR-NPEELEILGNG----EQNKSYIYISDCVDAMLFG 217 (313)
T ss_dssp HHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHH--HHHHHH-CTTEEEESTTS----CCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHH--HHHHHc-CCCceEEeCCC----CeEEeEEEHHHHHHHHHHH
Confidence 2 2222 999999999999975432 111111 111222 12444455543 4667899999999999998
Q ss_pred hcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 262 ATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 262 ~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+... . .+++||+++++.+|+.|+++.+++.+|++++
T Consensus 218 ~~~~-~---~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 253 (313)
T 3ehe_A 218 LRGD-E---RVNIFNIGSEDQIKVKRIAEIVCEELGLSPR 253 (313)
T ss_dssp TTCC-S---SEEEEECCCSCCEEHHHHHHHHHHHTTCCCE
T ss_pred hccC-C---CCceEEECCCCCeeHHHHHHHHHHHhCCCCc
Confidence 8733 2 2489999999999999999999999998653
No 8
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=100.00 E-value=2.1e-31 Score=230.19 Aligned_cols=245 Identities=16% Similarity=0.037 Sum_probs=182.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
|+|||||||||||++|+++|+ +.|++|++++|.+.... ....+++++.+|+.|.+ +.+.+++ |.|+|+++......
T Consensus 1 m~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~ 77 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLV-ELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence 589999999999999999999 68999999999876533 33568899999999998 8888887 77999987654444
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
+..++...+++|+.++.++++++++.. ..+++++|+..+|+.. ...++.|+.+..|.++ |+.+|...|
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~vyg~~-------~~~~~~e~~~~~p~~~---Y~~sK~~~e 145 (312)
T 3ko8_A 78 STTEPIVHFNENVVATFNVLEWARQTG--VRTVVFASSSTVYGDA-------DVIPTPEEEPYKPISV---YGAAKAAGE 145 (312)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSC-------SSSSBCTTSCCCCCSH---HHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeCcHHHhCCC-------CCCCCCCCCCCCCCCh---HHHHHHHHH
Confidence 444455588999999999999998763 3466666666677654 2456888887776666 888888776
Q ss_pred H-----hc--CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHH
Q 042242 188 K-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIW 260 (303)
Q Consensus 188 ~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~ 260 (303)
. .. + ++++++||+++||++.... ....+ ...+.. ...++...+.. ....++++++|+|++++.
T Consensus 146 ~~~~~~~~~~g-~~~~~lrp~~v~g~~~~~~--~~~~~--~~~~~~-~~~~~~~~~~g----~~~~~~i~v~Dva~a~~~ 215 (312)
T 3ko8_A 146 VMCATYARLFG-VRCLAVRYANVVGPRLRHG--VIYDF--IMKLRR-NPNVLEVLGDG----TQRKSYLYVRDAVEATLA 215 (312)
T ss_dssp HHHHHHHHHHC-CEEEEEEECEEECTTCCSS--HHHHH--HHHHHH-CTTEEEEC--------CEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCEEEEeeccccCcCCCCC--hHHHH--HHHHHh-CCCCeEEcCCC----CeEEeeEEHHHHHHHHHH
Confidence 2 22 4 8999999999999754321 11111 111222 12344445543 466789999999999999
Q ss_pred HhcC---cCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 261 VATN---DDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 261 ~~~~---~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++.. +.. .+++||+++++.+|+.|+++.+++.+|++.+
T Consensus 216 ~~~~~~~~~~---~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 256 (312)
T 3ko8_A 216 AWKKFEEMDA---PFLALNVGNVDAVRVLDIAQIVAEVLGLRPE 256 (312)
T ss_dssp HHHHHHHSCC---SEEEEEESCSSCEEHHHHHHHHHHHHTCCCE
T ss_pred HHHhccccCC---CCcEEEEcCCCceeHHHHHHHHHHHhCCCCc
Confidence 9877 333 2489999999999999999999999997653
No 9
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=99.98 E-value=2e-30 Score=228.73 Aligned_cols=244 Identities=14% Similarity=0.052 Sum_probs=180.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhc--CCCeEEEEecCCc------------cc--cccCCCeEEEEecCCCHHHHHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLIST--ANWKVYGIARKPE------------IT--AIQSSSYCFISCDLLNPLDIKRK 89 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~------------~~--~~~~~~~~~~~~D~~~~~~l~~~ 89 (303)
+++|+|||||||||||++|+++|+ + .|++|++++|.+. .. .....++.++.+|+.|.+++.++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~-~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 86 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQ-ENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL 86 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHH-hhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence 346899999999999999999999 6 7999999999764 11 12234678999999999999998
Q ss_pred -HhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 90 -LTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 90 -~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
+.++|.|+|+|+..... ..++.+.+++|+.++.++++++++.+.+ ++++|+..+|+.. ..+++|++
T Consensus 87 ~~~~~D~vih~A~~~~~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~~---~V~~SS~~vyg~~--------~~~~~E~~ 153 (362)
T 3sxp_A 87 EKLHFDYLFHQAAVSDTT--MLNQELVMKTNYQAFLNLLEIARSKKAK---VIYASSAGVYGNT--------KAPNVVGK 153 (362)
T ss_dssp TTSCCSEEEECCCCCGGG--CCCHHHHHHHHTHHHHHHHHHHHHTTCE---EEEEEEGGGGCSC--------CSSBCTTS
T ss_pred hccCCCEEEECCccCCcc--ccCHHHHHHHHHHHHHHHHHHHHHcCCc---EEEeCcHHHhCCC--------CCCCCCCC
Confidence 78888899998754332 2233348999999999999999887433 5555555577554 23788888
Q ss_pred CCCCCCccchHHHHHHHHHHh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhh
Q 042242 169 PRVSKSNNFYYVLEDLLKEKL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~ 243 (303)
+..|.++ |+.+|...|.. ... ++++++||+++||++..........+..+.. +. .+.++...+.. .
T Consensus 154 ~~~p~~~---Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g----~ 224 (362)
T 3sxp_A 154 NESPENV---YGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAM--AFKEVKLFEFG----E 224 (362)
T ss_dssp CCCCSSH---HHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHH--TTSEEECSGGG----C
T ss_pred CCCCCCh---hHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHH--hCCCeEEECCC----C
Confidence 8777777 99988888732 122 8899999999999765422111011111111 22 24555554443 4
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
...++++++|+|++++.++..+. .| +||+++++.+|+.|+++.+++.+|
T Consensus 225 ~~~~~i~v~Dva~ai~~~~~~~~----~g-~~~i~~~~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 225 QLRDFVYIEDVIQANVKAMKAQK----SG-VYNVGYSQARSYNEIVSILKEHLG 273 (362)
T ss_dssp CEEECEEHHHHHHHHHHHTTCSS----CE-EEEESCSCEEEHHHHHHHHHHHHC
T ss_pred eEEccEEHHHHHHHHHHHHhcCC----CC-EEEeCCCCCccHHHHHHHHHHHcC
Confidence 66789999999999999987653 24 999999999999999999999999
No 10
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.98 E-value=1.4e-30 Score=227.73 Aligned_cols=260 Identities=15% Similarity=0.101 Sum_probs=184.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEEEecCCCHHHHHHHHh--ccCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFISCDLLNPLDIKRKLT--LLEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~--~~~~V 96 (303)
++|+|||||||||||++++++|+ +.|++|++++|+...... ...+++++.+|++|.+++.++++ ++|.|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELL-AHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHH-HCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 35799999999999999999999 689999999997655321 13478899999999999999998 67789
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCcc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNN 176 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~ 176 (303)
+|+|+..........+.+.++.|+.++.++++++++.. ..+++++|+..+|+.. ...+++|+.+..|.++
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~g~~-------~~~~~~e~~~~~~~~~- 152 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA--VKRIVFSSSATVYGVP-------ERSPIDETFPLSATNP- 152 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGBCSC-------SSSSBCTTSCCBCSSH-
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC--CCEEEEEecceEecCC-------CCCCCCCCCCCCCCCh-
Confidence 99987644333333444688999999999999998763 3455566665577543 2456888888776666
Q ss_pred chHHHHHHHHHH-----h-cCC-cceEEecCCceeecCCCCcc-----chhhH-HHHHHHHhhhCCCceeeCCch---hh
Q 042242 177 FYYVLEDLLKEK-----L-AGK-VAWSVHRPGLLLGSSHRSLY-----NFLGC-LCVYGAVCKHLNLPFVFGGTR---EI 240 (303)
Q Consensus 177 ~~y~~~k~~~e~-----~-~~~-~~~~ilRp~~v~G~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~g~~---~~ 240 (303)
|+.+|...|. . ... ++++++||+++||++..... ..... +........+...++...|.. ..
T Consensus 153 --Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (341)
T 3enk_A 153 --YGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPD 230 (341)
T ss_dssp --HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTT
T ss_pred --hHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCC
Confidence 9988887772 1 222 89999999999997542100 00011 111112222223444443310 00
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
. .+..++++++|+|++++.++..+... ..+++||+++++.+|+.|+++.+++.+|++.+
T Consensus 231 g-~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 289 (341)
T 3enk_A 231 G-TGVRDYIHVVDLARGHIAALDALERR-DASLTVNLGTGRGYSVLEVVRAFEKASGRAVP 289 (341)
T ss_dssp S-SCEECEEEHHHHHHHHHHHHHHHHHH-TSCEEEEESCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred C-CeeEeeEEHHHHHHHHHHHHHhhhcC-CcceEEEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence 1 56678999999999999988763110 22489999999999999999999999998765
No 11
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=99.97 E-value=1.9e-30 Score=228.02 Aligned_cols=251 Identities=17% Similarity=0.124 Sum_probs=183.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--cc----------CCCeEEEEecCCCHHHHHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQ----------SSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~----------~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
++++|||||||||||++|+++|+ +.|++|++++|++.... .. ..+++++.+|+.|.+++.++++++|
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLL-KLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 45799999999999999999999 57999999999764211 10 2578999999999999999999999
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS 174 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~ 174 (303)
.|+|+++......+..++.+.+++|+.++.+++++|++. ...+++++|+..+|+... ..+++|+++..|..
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~-------~~~~~E~~~~~~~~ 175 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHP-------GLPKVEDTIGKPLS 175 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCC-------CSSBCTTCCCCCCS
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCCC-------CCCCCCCCCCCCCC
Confidence 999998754322222344458899999999999999876 345666666666775431 34678888766666
Q ss_pred ccchHHHHHHHHHH-----h--cCCcceEEecCCceeecCCCCcc---chhhHHHHHHHHhhhCCCceeeCCchhhhhhh
Q 042242 175 NNFYYVLEDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSLY---NFLGCLCVYGAVCKHLNLPFVFGGTREIWEEY 244 (303)
Q Consensus 175 ~~~~y~~~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (303)
+ |+.+|...|. . .+ ++++++||+.|||++..... .+...+ ...+.+ +.++.+.|.. ..
T Consensus 176 ~---Y~~sK~~~e~~~~~~~~~~g-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~g~g----~~ 243 (352)
T 1sb8_A 176 P---YAVTKYVNELYADVFSRCYG-FSTIGLRYFNVFGRRQDPNGAYAAVIPKW--TSSMIQ--GDDVYINGDG----ET 243 (352)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHC-CCCEEEEECCEECTTCCCCSTTCCHHHHH--HHHHHH--TCCCEEESSS----CC
T ss_pred h---hHHHHHHHHHHHHHHHHHcC-CCEEEEEECceeCcCCCCCcchhhHHHHH--HHHHHC--CCCcEEeCCC----Cc
Confidence 6 8888777762 1 14 89999999999997543211 111111 111222 4444444433 45
Q ss_pred cccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHh---cccCC
Q 042242 245 CLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKF---GVKVP 301 (303)
Q Consensus 245 ~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~---g~~~~ 301 (303)
..++++++|+|++++.++..+.. ..+++||+++++.+|+.|+++.+++.+ |++.+
T Consensus 244 ~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~ 301 (352)
T 1sb8_A 244 SRDFCYIENTVQANLLAATAGLD--ARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYH 301 (352)
T ss_dssp EECCEEHHHHHHHHHHHHTCCGG--GCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred eEeeEEHHHHHHHHHHHHhcccc--CCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCC
Confidence 66789999999999988876322 224899999999999999999999999 87754
No 12
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=99.97 E-value=3.7e-30 Score=224.03 Aligned_cols=258 Identities=15% Similarity=0.100 Sum_probs=182.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHh--ccCceeEEeecccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFWVTWA 105 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~~~~~ 105 (303)
|+|||||||||||++|+++|+ +.|++|++++|...... ....+++++.+|+.|.+++.++++ ++|.|+|+++....
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~ 80 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV 80 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred CEEEEECCCcHHHHHHHHHHH-hCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence 689999999999999999999 67999999999765422 122378899999999999999998 77889999875432
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHH
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLL 185 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~ 185 (303)
..+..++.+.+++|+.++.+++++|++. +..+++++|+..+|+.. ...+++|+++..|..+ |+.+|..
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~-------~~~~~~E~~~~~~~~~---Y~~sK~~ 148 (330)
T 2c20_A 81 GVSMEKPLQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATYGEV-------DVDLITEETMTNPTNT---YGETKLA 148 (330)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGGCSC-------SSSSBCTTSCCCCSSH---HHHHHHH
T ss_pred cccccCHHHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceeeCCC-------CCCCCCcCCCCCCCCh---HHHHHHH
Confidence 2223344558899999999999999876 34567777776677543 2456888887765566 8888777
Q ss_pred HHH-----hcCC-cceEEecCCceeecCCCCcc-----chhhHHHHHHHHhhhCCCceeeCCchh---hhhhhcccCccH
Q 042242 186 KEK-----LAGK-VAWSVHRPGLLLGSSHRSLY-----NFLGCLCVYGAVCKHLNLPFVFGGTRE---IWEEYCLDGSDS 251 (303)
Q Consensus 186 ~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~ 251 (303)
.|. .... ++++++||+.+||++..... .....+..+.......+.++.+.|... .. ....+++++
T Consensus 149 ~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g-~~~~~~v~v 227 (330)
T 2c20_A 149 IEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG-TCIRDYIHV 227 (330)
T ss_dssp HHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS-SCEECEEEH
T ss_pred HHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC-ceeEeeEeH
Confidence 762 2222 99999999999997532100 000011111111222233444433100 01 456788999
Q ss_pred HHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 252 RLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 252 ~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+|+|++++.++..+... ..+++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 228 ~Dva~a~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 276 (330)
T 2c20_A 228 EDLVAAHFLGLKDLQNG-GESDFYNLGNGNGFSVKEIVDAVREVTNHEIP 276 (330)
T ss_dssp HHHHHHHHHHHHHHHTT-CCCEEEECCCTTCBCHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHhccccC-CCCCeEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence 99999999988764321 11379999999999999999999999998765
No 13
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=99.97 E-value=9.2e-31 Score=223.52 Aligned_cols=227 Identities=15% Similarity=0.070 Sum_probs=173.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh--ccCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~~~~ 104 (303)
|+++|||||||||||+++++.|+ +.|++|++++|.. +|+.|.+.+.++++ ++|.|+|+++...
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~--------------~D~~d~~~~~~~~~~~~~d~vi~~a~~~~ 68 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELN-PEEYDIYPFDKKL--------------LDITNISQVQQVVQEIRPHIIIHCAAYTK 68 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSC-TTTEEEEEECTTT--------------SCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred ceeEEEEECCCCHHHHHHHHHHH-hCCCEEEEecccc--------------cCCCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 43499999999999999999999 6799999999932 79999999999998 4788999987654
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
......++.+.+++|+.++.+++++|++.+. +++++|+..+|+.. ...+++|+++..|.++ |+.+|.
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~v~~SS~~vy~~~-------~~~~~~E~~~~~p~~~---Y~~sK~ 135 (287)
T 3sc6_A 69 VDQAEKERDLAYVINAIGARNVAVASQLVGA---KLVYISTDYVFQGD-------RPEGYDEFHNPAPINI---YGASKY 135 (287)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC---EEEEEEEGGGSCCC-------CSSCBCTTSCCCCCSH---HHHHHH
T ss_pred hHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEchhhhcCCC-------CCCCCCCCCCCCCCCH---HHHHHH
Confidence 3332234455899999999999999998754 35555555577544 2467889988777777 999998
Q ss_pred HHHHh---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 185 LKEKL---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 185 ~~e~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
..|.. .. .+++++||+.+||++... +...+ ...+. .+.++...| ....++++++|+|++++.+
T Consensus 136 ~~E~~~~~~~-~~~~ilR~~~v~G~~~~~---~~~~~--~~~~~--~~~~~~~~~------~~~~~~i~v~Dva~~~~~~ 201 (287)
T 3sc6_A 136 AGEQFVKELH-NKYFIVRTSWLYGKYGNN---FVKTM--IRLGK--EREEISVVA------DQIGSPTYVADLNVMINKL 201 (287)
T ss_dssp HHHHHHHHHC-SSEEEEEECSEECSSSCC---HHHHH--HHHHT--TCSEEEEEC------SCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCcEEEeeeeecCCCCCc---HHHHH--HHHHH--cCCCeEeec------CcccCceEHHHHHHHHHHH
Confidence 88843 23 678999999999964322 11111 11111 245566666 3456789999999999999
Q ss_pred hcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 262 ATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 262 ~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
+..+. + ++||+++++.+|+.|+++.+++.+|++.
T Consensus 202 ~~~~~--~---~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 235 (287)
T 3sc6_A 202 IHTSL--Y---GTYHVSNTGSCSWFEFAKKIFSYANMKV 235 (287)
T ss_dssp HTSCC--C---EEEECCCBSCEEHHHHHHHHHHHHTCCC
T ss_pred HhCCC--C---CeEEEcCCCcccHHHHHHHHHHHcCCCc
Confidence 88775 3 7999999999999999999999999764
No 14
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=99.97 E-value=5.7e-30 Score=223.37 Aligned_cols=250 Identities=14% Similarity=0.093 Sum_probs=178.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCcc--c-cc----cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEI--T-AI----QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~--~-~~----~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
+++|||||||||||++|+++|++.+ +++|++++|.... . .. ...+++++.+|+.|.+++.+++.++|.|+|+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 4689999999999999999999433 4899999997521 1 11 1347889999999999999999999999999
Q ss_pred eecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchH
Q 042242 100 FWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYY 179 (303)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y 179 (303)
|+......+..+..+.+++|+.++.+++++|.+.. ...+++++|+..+|+... ..+++|+++..|..+ |
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~-------~~~~~E~~~~~~~~~---Y 151 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVYGDIL-------KGSFTENDRLMPSSP---Y 151 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCCCS-------SSCBCTTBCCCCCSH---H
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHHCCCC-------CCCcCCCCCCCCCCc---c
Confidence 87643222223334588999999999999999863 124666666666775432 346788877665666 8
Q ss_pred HHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHH
Q 042242 180 VLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRL 253 (303)
Q Consensus 180 ~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 253 (303)
+.+|...|. .... ++++++||+.|||++... ..+...+ ...+.+ +.++.+.+.. .+..++++++|
T Consensus 152 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~-~~~~~~~--~~~~~~--~~~~~~~~~~----~~~~~~i~v~D 222 (336)
T 2hun_A 152 SATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP-EKLIPKT--IIRASL--GLKIPIYGTG----KNVRDWLYVED 222 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT-TSHHHHH--HHHHHT--TCCEEEETC-------CEEEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc-CchHHHH--HHHHHc--CCCceEeCCC----CceeeeEEHHH
Confidence 888877762 2222 899999999999975421 1111111 111222 3444443333 45567889999
Q ss_pred HHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 254 VAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 254 ~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+|++++.++..+. . |++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 223 va~~~~~~~~~~~-~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~ 266 (336)
T 2hun_A 223 HVRAIELVLLKGE-S---REIYNISAGEEKTNLEVVKIILRLMGKGEE 266 (336)
T ss_dssp HHHHHHHHHHHCC-T---TCEEEECCSCEECHHHHHHHHHHHTTCCST
T ss_pred HHHHHHHHHhCCC-C---CCEEEeCCCCcccHHHHHHHHHHHhCCCcc
Confidence 9999998886542 2 489999999999999999999999998754
No 15
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=99.97 E-value=8.7e-30 Score=223.30 Aligned_cols=257 Identities=16% Similarity=0.106 Sum_probs=181.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc------cc-----c---cCCCeEEEEecCCCHHHHHHHHh-
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI------TA-----I---QSSSYCFISCDLLNPLDIKRKLT- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~------~~-----~---~~~~~~~~~~D~~~~~~l~~~~~- 91 (303)
|+|+|||||||||||++|+++|+ ..|++|++++|.... .. . ...+++++.+|+.|.+++.++++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELL-EAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-HTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence 56899999999999999999999 579999999986532 10 0 13468899999999999999998
Q ss_pred -ccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 92 -LLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 92 -~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
++|.|+|+++.........++.+.+++|+.++.++++++++.. ..+++++|+..+|+.. ...+++|+++.
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~g~~-------~~~~~~E~~~~ 150 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVYGNP-------QYLPLDEAHPT 150 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGGCSC-------SSSSBCTTSCC
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHhCCC-------CCCCcCCCCCC
Confidence 6778999977543222233444588999999999999998763 3456666666677543 24568888876
Q ss_pred CC-CCccchHHHHHHHHHH-----h-cCC-cceEEecCCceeecCCCC---------ccchhhHHHHHHHHhhhCCCcee
Q 042242 171 VS-KSNNFYYVLEDLLKEK-----L-AGK-VAWSVHRPGLLLGSSHRS---------LYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 171 ~p-~~~~~~y~~~k~~~e~-----~-~~~-~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.| ..+ |+.+|...|. . .+. ++++++||+++||+.+.. ..++.. .+.....+.+.++.
T Consensus 151 ~p~~~~---Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~ 224 (348)
T 1ek6_A 151 GGCTNP---YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMP---YVSQVAIGRREALN 224 (348)
T ss_dssp CCCSSH---HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHH---HHHHHHHTSSSCEE
T ss_pred CCCCCc---hHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHH---HHHHHHHhcCCCeE
Confidence 65 455 8888777662 2 223 899999999999974310 011111 11222222344444
Q ss_pred eCCch---hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 234 FGGTR---EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 234 ~~g~~---~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+.|.. ... ....++++++|+|++++.++..+... .++++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 225 ~~g~~~~~~~g-~~~~~~i~v~Dva~a~~~~~~~~~~~-~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 293 (348)
T 1ek6_A 225 VFGNDYDTEDG-TGVRDYIHVVDLAKGHIAALRKLKEQ-CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293 (348)
T ss_dssp EECSCSSSSSS-SCEECEEEHHHHHHHHHHHHHHHTTT-CCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred EeCCcccCCCC-ceEEeeEEHHHHHHHHHHHHhccccc-CCceEEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence 43310 001 46678999999999999988765311 11279999999999999999999999998764
No 16
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=99.97 E-value=1.1e-29 Score=220.09 Aligned_cols=249 Identities=17% Similarity=0.156 Sum_probs=179.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~~~~~ 104 (303)
+.++|||||||||||++|+++|+ +.|++|++++|++.. .. .+++++.+|+.|.+++.+++++ +|.|+|+|+...
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~-~~G~~V~~~~r~~~~-~~--l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 86 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLT-EQNVEVFGTSRNNEA-KL--PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS 86 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCTTC-CC--TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred CcceEEEECCCChHHHHHHHHHH-HCCCEEEEEecCCcc-cc--ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence 35799999999999999999999 689999999998765 21 2788999999999999999987 788999987543
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
...+..+..+.+++|+.++.+++++|+.. ....+++++|+..+|+.... ...+++|+++..|..+ |+.+|.
T Consensus 87 ~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~-----~~~~~~E~~~~~~~~~---Y~~sK~ 157 (321)
T 2pk3_A 87 VKDSWLNKKGTFSTNVFGTLHVLDAVRDS-NLDCRILTIGSSEEYGMILP-----EESPVSEENQLRPMSP---YGVSKA 157 (321)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEEGGGTBSCCG-----GGCSBCTTSCCBCCSH---HHHHHH
T ss_pred hhhhhhcHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEccHHhcCCCCC-----CCCCCCCCCCCCCCCc---cHHHHH
Confidence 22222234458999999999999999764 23456666666667754310 1456888887766666 888887
Q ss_pred HHHH-----hc--CCcceEEecCCceeecCCCCccchhhHHHHHHHHhh-hCC--CceeeCCchhhhhhhcccCccHHHH
Q 042242 185 LKEK-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCK-HLN--LPFVFGGTREIWEEYCLDGSDSRLV 254 (303)
Q Consensus 185 ~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (303)
..|. .. + ++++++||+++||++.... .....+. ..+.+ ..+ .++...+.. ....++++++|+
T Consensus 158 ~~E~~~~~~~~~~g-i~~~ilrp~~v~g~~~~~~-~~~~~~~--~~~~~~~~g~~~~~~~~~~~----~~~~~~v~v~Dv 229 (321)
T 2pk3_A 158 SVGMLARQYVKAYG-MDIIHTRTFNHIGPGQSLG-FVTQDFA--KQIVDIEMEKQEPIIKVGNL----EAVRDFTDVRDI 229 (321)
T ss_dssp HHHHHHHHHHHHHC-CEEEEEEECEEECTTCCTT-SHHHHHH--HHHHHHHTTSSCSEEEESCS----SCEEEEEEHHHH
T ss_pred HHHHHHHHHHHHcC-CCEEEEEeCcccCcCCCCC-chHHHHH--HHHHHHhcCCCCCeEEeCCC----CcEEeeEEHHHH
Confidence 7762 22 4 8999999999999754321 1111111 11111 013 343333332 455678899999
Q ss_pred HHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 255 AEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 255 a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
|++++.++..+ .. |++||+++++.+|+.|+++.+.+.+|.+.
T Consensus 230 a~a~~~~~~~~-~~---g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 271 (321)
T 2pk3_A 230 VQAYWLLSQYG-KT---GDVYNVCSGIGTRIQDVLDLLLAMANVKI 271 (321)
T ss_dssp HHHHHHHHHHC-CT---TCEEEESCSCEEEHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHhCC-CC---CCeEEeCCCCCeeHHHHHHHHHHHhCCCC
Confidence 99999988765 22 37999999999999999999999999764
No 17
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=99.97 E-value=1.5e-29 Score=222.67 Aligned_cols=251 Identities=16% Similarity=0.053 Sum_probs=181.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc------cCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI------QSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
++++|||||||||||++|+++|+ ..|++|++++|++..... ...+++++.+|+.|.+++.+++++ +|.|+|
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQ-TMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHH-hCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 45799999999999999999999 689999999998754321 134789999999999999999987 678999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
+++......+..+..+.+++|+.++.+++++|.+.. ...+++++|+..+|+.... ..++.|+++..|..+
T Consensus 87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~vyg~~~~------~~~~~E~~~~~~~~~--- 156 (357)
T 1rkx_A 87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDKCYDNKEW------IWGYRENEAMGGYDP--- 156 (357)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGGGBCCCCS------SSCBCTTSCBCCSSH---
T ss_pred CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEecCHHHhCCCCc------CCCCCCCCCCCCCCc---
Confidence 987533322333444588999999999999998752 3567777777778865421 235677776655566
Q ss_pred HHHHHHHHHH-----h-----------cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 179 YVLEDLLKEK-----L-----------AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 179 y~~~k~~~e~-----~-----------~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
|+.+|...|. . .+ ++++++||+.+||++......++..+. ..+.+ +.++.+++.
T Consensus 157 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g-i~~~~lrp~~v~G~~~~~~~~~~~~~~--~~~~~--g~~~~~~~~----- 226 (357)
T 1rkx_A 157 YSNSKGCAELVTSSYRNSFFNPANYGQHG-TAVATVRAGNVIGGGDWALDRIVPDIL--RAFEQ--SQPVIIRNP----- 226 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCGGGHHHHC-CEEEEEECCCEECTTCCCSSCHHHHHH--HHHHT--TCCEECSCT-----
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhccccCC-ceEEEEeeceeeCCCCCccccHHHHHH--HHHhc--CCCEEECCC-----
Confidence 8888877762 1 15 899999999999975432112222211 11222 445444431
Q ss_pred hhcccCccHHHHHHHHHHHhcC----cCCcCCCCceEEeecC--CCccHHhhHHHHHHHhcccCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATN----DDISSTKGQAFNAING--PRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~----~~~~~~~g~~yni~~~--~~~s~~e~~~~i~~~~g~~~~ 301 (303)
....++++++|+|++++.++.. +... +++||++++ +.+|+.|+++.+++.+|.+.+
T Consensus 227 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~---~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~ 288 (357)
T 1rkx_A 227 HAIRPWQHVLEPLSGYLLLAQKLYTDGAEY---AEGWNFGPNDADATPVKNIVEQMVKYWGEGAS 288 (357)
T ss_dssp TCEECCEETHHHHHHHHHHHHHHHHTCGGG---CSEEECCCCGGGCEEHHHHHHHHHHHHCTTCC
T ss_pred CCeeccEeHHHHHHHHHHHHHhhhhcCCCC---CceEEECCCCCCcccHHHHHHHHHHHhCCCCc
Confidence 4556789999999999988764 1222 379999974 689999999999999998654
No 18
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.97 E-value=1.2e-29 Score=221.31 Aligned_cols=252 Identities=13% Similarity=0.070 Sum_probs=178.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------c-cCCCeEEEEecCCCHHHHHHHHhcc--Cc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------I-QSSSYCFISCDLLNPLDIKRKLTLL--ED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~-~~~~~~~~~~D~~~~~~l~~~~~~~--~~ 95 (303)
..++++|||||||||||++|+++|+ +.|++|++++|++.... . ...+++++.+|+.|.+++.++++++ |.
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLL-EKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cccCCeEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence 4467899999999999999999999 57999999999875421 0 1246889999999999999999874 77
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
|+|+++......+..++.+.+++|+.++.+++++|++... ..+++++|+..+|+.. ...+++|+++..|.++
T Consensus 90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~v~~SS~~v~g~~-------~~~~~~E~~~~~p~~~ 161 (335)
T 1rpn_A 90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMFGLI-------QAERQDENTPFYPRSP 161 (335)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGGCSC-------SSSSBCTTSCCCCCSH
T ss_pred EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeCHHHhCCC-------CCCCCCcccCCCCCCh
Confidence 9999875433222223445889999999999999987631 1455666665577543 1346788887766666
Q ss_pred cchHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhhccc
Q 042242 176 NFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEYCLD 247 (303)
Q Consensus 176 ~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~ 247 (303)
|+.+|...|. .. + ++++++||+.+||++..... ....+..+.. +..+ ..+....|.. ....+
T Consensus 162 ---Y~~sK~~~e~~~~~~~~~~~-~~~~i~r~~~v~Gp~~~~~~-~~~~~~~~~~~~~~g-~~~~~~~g~g----~~~~~ 231 (335)
T 1rpn_A 162 ---YGVAKLYGHWITVNYRESFG-LHASSGILFNHESPLRGIEF-VTRKVTDAVARIKLG-KQQELRLGNV----DAKRD 231 (335)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHC-CCEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHTT-SCSCEEESCT----TCEEE
T ss_pred ---hHHHHHHHHHHHHHHHHHcC-CcEEEEeeCcccCCCCCCCc-chHHHHHHHHHHHcC-CCceEEeCCC----cceec
Confidence 8888877762 22 4 89999999999997543211 0011111111 2221 1222223332 45667
Q ss_pred CccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 248 GSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 248 ~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
+++++|+|++++.++..+. + ++||+++++.+|+.|+++.+++.+|.+.
T Consensus 232 ~i~v~Dva~a~~~~~~~~~--~---~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 279 (335)
T 1rpn_A 232 WGFAGDYVEAMWLMLQQDK--A---DDYVVATGVTTTVRDMCQIAFEHVGLDY 279 (335)
T ss_dssp CEEHHHHHHHHHHHHHSSS--C---CCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred eEEHHHHHHHHHHHHhcCC--C---CEEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence 8999999999999987753 2 6899999999999999999999999863
No 19
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=99.97 E-value=1.6e-29 Score=218.23 Aligned_cols=247 Identities=18% Similarity=0.166 Sum_probs=176.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHh--ccCceeEEeecccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFWVTWA 105 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~~~~~ 105 (303)
|+||||||+||||++++++|+ +.|++|++++|...... ....+++++.+|++|.+++.++++ ++|.|+|+++....
T Consensus 1 m~vlVTGatG~iG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~ 79 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLL-ARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV 79 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-TTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred CEEEEEeCCcHHHHHHHHHHH-HCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc
Confidence 379999999999999999999 68999999998543321 122467889999999999999998 67789999765432
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecc-cccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGM-KHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~-~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
..+..++.+.+++|+.++.+++++|++.. ..+++++|+. .+|+... ...+.+|+++..|..+ |+.+|.
T Consensus 80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iv~~SS~~~~~g~~~------~~~~~~E~~~~~~~~~---Y~~sK~ 148 (311)
T 2p5y_A 80 KVSVEDPVLDFEVNLLGGLNLLEACRQYG--VEKLVFASTGGAIYGEVP------EGERAEETWPPRPKSP---YAASKA 148 (311)
T ss_dssp HHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEHHHHHCCCC------TTCCBCTTSCCCCCSH---HHHHHH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCEEEEeCCChhhcCCCC------CCCCcCCCCCCCCCCh---HHHHHH
Confidence 22233444588999999999999998763 3455555554 5675411 1346778777665566 888887
Q ss_pred HHHH-----h--cCCcceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeC-----CchhhhhhhcccCccH
Q 042242 185 LKEK-----L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFG-----GTREIWEEYCLDGSDS 251 (303)
Q Consensus 185 ~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~ 251 (303)
..|. . .+ ++++++||+++||++...... ...+..+.. +.+ +.++... |.. ....+++++
T Consensus 149 ~~e~~~~~~~~~~~-~~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~g----~~~~~~i~v 220 (311)
T 2p5y_A 149 AFEHYLSVYGQSYG-LKWVSLRYGNVYGPRQDPHGE-AGVVAIFAERVLK--GLPVTLYARKTPGDE----GCVRDYVYV 220 (311)
T ss_dssp HHHHHHHHHHHHHC-CCEEEEEECEEECTTCCSSST-THHHHHHHHHHHH--TCCEEEECSSSTTSC----CCEECEEEH
T ss_pred HHHHHHHHHHHHcC-CCEEEEeeccccCcCCCCCCc-CcHHHHHHHHHHc--CCCcEEEecccCCCC----CeEEeeEEH
Confidence 7762 1 24 899999999999975432210 011111111 222 3443333 332 455678999
Q ss_pred HHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 252 RLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 252 ~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+|+|++++.++..+ + ++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 221 ~Dva~a~~~~~~~~---~---~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 264 (311)
T 2p5y_A 221 GDVAEAHALALFSL---E---GIYNVGTGEGHTTREVLMAVAEAAGKAPE 264 (311)
T ss_dssp HHHHHHHHHHHHHC---C---EEEEESCSCCEEHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhCC---C---CEEEeCCCCCccHHHHHHHHHHHhCCCCC
Confidence 99999999888654 3 79999999999999999999999998654
No 20
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=99.97 E-value=3.6e-29 Score=222.00 Aligned_cols=255 Identities=15% Similarity=0.050 Sum_probs=179.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWA 105 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~ 105 (303)
++|+|||||||||||++|+++|+ +.|++|++++|++.... ....+++++.+|+.|.+++.++++++|.|+|+++....
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~ 106 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLK-HEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG 106 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHH-HCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCc
Confidence 45799999999999999999999 57999999999876532 22357889999999999999999999999999775322
Q ss_pred cCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCC--CCCCCCccchHHHH
Q 042242 106 SQF-ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC--PRVSKSNNFYYVLE 182 (303)
Q Consensus 106 ~~~-~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~--~~~p~~~~~~y~~~ 182 (303)
... ..++.+.+++|+.++.+++++|++.. ..+++++|+..+|+...... ....++.|++ +..|..+ |+.+
T Consensus 107 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~--~~~~V~~SS~~v~~~~~~~~--~~~~~~~E~~~~~~~~~~~---Y~~s 179 (379)
T 2c5a_A 107 MGFIQSNHSVIMYNNTMISFNMIEAARING--IKRFFYASSACIYPEFKQLE--TTNVSLKESDAWPAEPQDA---FGLE 179 (379)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEEEGGGSCGGGSSS--SSSCEECGGGGSSBCCSSH---HHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeehheeCCCCCCC--ccCCCcCcccCCCCCCCCh---hHHH
Confidence 111 22334588999999999999998763 34666666656775432100 0123466665 3333444 8888
Q ss_pred HHHHHH-----h--cCCcceEEecCCceeecCCCCccchhhHHHHHH-HHhhhCCCc-eeeCCchhhhhhhcccCccHHH
Q 042242 183 DLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYG-AVCKHLNLP-FVFGGTREIWEEYCLDGSDSRL 253 (303)
Q Consensus 183 k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~d 253 (303)
|...|. . .+ ++++++||+.+||+...........+..+. .+.+ +.+ +...+.. ....++++++|
T Consensus 180 K~~~E~~~~~~~~~~g-i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~g----~~~~~~i~v~D 252 (379)
T 2c5a_A 180 KLATEELCKHYNKDFG-IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT--STDRFEMWGDG----LQTRSFTFIDE 252 (379)
T ss_dssp HHHHHHHHHHHHHHHC-CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHH--CSSCEEEESCS----CCEECCEEHHH
T ss_pred HHHHHHHHHHHHHHHC-CCEEEEEeCceeCcCCCcccccccHHHHHHHHHHh--CCCceEEeCCC----CeeEEEEEHHH
Confidence 777762 1 24 999999999999975432111100111111 1222 333 4434432 45568999999
Q ss_pred HHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 254 VAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 254 ~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+|++++.++..+ . +++||+++++.+|+.|+++.+++.+|++.+
T Consensus 253 va~ai~~~l~~~--~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 295 (379)
T 2c5a_A 253 CVEGVLRLTKSD--F---REPVNIGSDEMVSMNEMAEMVLSFEEKKLP 295 (379)
T ss_dssp HHHHHHHHHHSS--C---CSCEEECCCCCEEHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHHhhcc--C---CCeEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence 999999988765 2 268999999999999999999999998754
No 21
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=99.97 E-value=1.4e-30 Score=222.37 Aligned_cols=233 Identities=16% Similarity=0.132 Sum_probs=177.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc-cCceeEEeecccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL-LEDVTHIFWVTWA 105 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-~~~V~~~~~~~~~ 105 (303)
++++||||| +||||++|+++|+ +.|++|++++|++.+. ..+++++.+|+.|.+++.+++++ +|.|+|+++...
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~-~~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~- 75 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLT-AQGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE- 75 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHH-HTTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH-
T ss_pred CCCcEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC-
Confidence 347899999 5999999999999 6899999999987653 46889999999999999999988 888999976521
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHH
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLL 185 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~ 185 (303)
.++...+++|+.++.+++++|++. ...+++++|+..+|+.. ...+++|+++..|.++ |+.+|..
T Consensus 76 ----~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~-------~~~~~~E~~~~~p~~~---Y~~sK~~ 139 (286)
T 3gpi_A 76 ----YSDEHYRLSYVEGLRNTLSALEGA--PLQHVFFVSSTGVYGQE-------VEEWLDEDTPPIAKDF---SGKRMLE 139 (286)
T ss_dssp ----HC-----CCSHHHHHHHHHHTTTS--CCCEEEEEEEGGGCCCC-------CSSEECTTSCCCCCSH---HHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHhhC--CCCEEEEEcccEEEcCC-------CCCCCCCCCCCCCCCh---hhHHHHH
Confidence 223347889999999999999865 34566666666677654 2456788888776777 9999999
Q ss_pred HHHhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcC
Q 042242 186 KEKLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATN 264 (303)
Q Consensus 186 ~e~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~ 264 (303)
.|.. .. ++++++||+.+||++.. .++.. +. ..+. .+.. ....++++++|+|++++.++..
T Consensus 140 ~E~~-~~~~~~~ilR~~~v~G~~~~---~~~~~------~~---~~~~--~~~~----~~~~~~i~v~Dva~~~~~~~~~ 200 (286)
T 3gpi_A 140 AEAL-LAAYSSTILRFSGIYGPGRL---RMIRQ------AQ---TPEQ--WPAR----NAWTNRIHRDDGAAFIAYLIQQ 200 (286)
T ss_dssp HHHH-GGGSSEEEEEECEEEBTTBC---HHHHH------TT---CGGG--SCSS----BCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHH-HhcCCeEEEecccccCCCch---hHHHH------HH---hccc--CCCc----CceeEEEEHHHHHHHHHHHHhh
Confidence 9876 44 89999999999996432 11111 11 1111 1222 5567789999999999999887
Q ss_pred cCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 265 DDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 265 ~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+... ..+++||+++++.+|+.|+++.+++.+|++.+
T Consensus 201 ~~~~-~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~ 236 (286)
T 3gpi_A 201 RSHA-VPERLYIVTDNQPLPVHDLLRWLADRQGIAYP 236 (286)
T ss_dssp HTTS-CCCSEEEECCSCCEEHHHHHHHHHHHTTCCCC
T ss_pred hccC-CCCceEEEeCCCCCCHHHHHHHHHHHcCCCCC
Confidence 5210 22489999999999999999999999998876
No 22
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=99.97 E-value=4.8e-30 Score=221.95 Aligned_cols=240 Identities=15% Similarity=0.089 Sum_probs=152.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~~~~~ 104 (303)
|+|+|||||||||||++|+++|+ ..|++|++++|+... ++ ++.+|+.|.+++.+++++ +|.|+|+++...
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~-----~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 72 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQ-QNNWHAVGCGFRRAR-----PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR 72 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-TTTCEEEEEC-------------------------CHHHHHHHCCSEEEECC----
T ss_pred CCCeEEEECCCcHHHHHHHHHHH-hCCCeEEEEccCCCC-----CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence 56899999999999999999999 689999999987643 22 778999999999999986 678999987644
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
...+..++.+.+++|+.++.++++++.+.+. +++++|+..+|+.. ..+++|+++..|..+ |+.+|.
T Consensus 73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~~v~~SS~~v~~~~--------~~~~~E~~~~~~~~~---Y~~sK~ 138 (315)
T 2ydy_A 73 PDVVENQPDAASQLNVDASGNLAKEAAAVGA---FLIYISSDYVFDGT--------NPPYREEDIPAPLNL---YGKTKL 138 (315)
T ss_dssp ---------------CHHHHHHHHHHHHHTC---EEEEEEEGGGSCSS--------SCSBCTTSCCCCCSH---HHHHHH
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEchHHHcCCC--------CCCCCCCCCCCCcCH---HHHHHH
Confidence 3333344455889999999999999998643 55666665577542 446888887666666 999888
Q ss_pred HHHHh---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 185 LKEKL---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 185 ~~e~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
..|.. .. ++++++||+.|||+......++...+. ..+. ..+.++...+ ....++++++|+|++++.+
T Consensus 139 ~~e~~~~~~~-~~~~~lR~~~v~G~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~------~~~~~~i~v~Dva~a~~~~ 208 (315)
T 2ydy_A 139 DGEKAVLENN-LGAAVLRIPILYGEVEKLEESAVTVMF--DKVQ-FSNKSANMDH------WQQRFPTHVKDVATVCRQL 208 (315)
T ss_dssp HHHHHHHHHC-TTCEEEEECSEECSCSSGGGSTTGGGH--HHHH-CCSSCEEEEC------SSBBCCEEHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCeEEEeeeeeeCCCCcccccHHHHHH--HHHH-hcCCCeeecc------CceECcEEHHHHHHHHHHH
Confidence 88742 23 788999999999975431112222211 1121 0244444444 4456789999999999988
Q ss_pred hcCc---CCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 262 ATND---DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 262 ~~~~---~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+..+ ... +++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 209 ~~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 248 (315)
T 2ydy_A 209 AEKRMLDPSI---KGTFHWSGNEQMTKYEMACAIADAFNLPSS 248 (315)
T ss_dssp HHHHHTCTTC---CEEEECCCSCCBCHHHHHHHHHHHTTCCCT
T ss_pred HHhhccccCC---CCeEEEcCCCcccHHHHHHHHHHHhCCChh
Confidence 8654 222 379999999999999999999999998753
No 23
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=99.97 E-value=1.7e-29 Score=220.54 Aligned_cols=245 Identities=13% Similarity=0.126 Sum_probs=178.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcC---C---CeEEEEecCCcc---ccc----cCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTA---N---WKVYGIARKPEI---TAI----QSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~---g---~~V~~~~r~~~~---~~~----~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
|+|||||||||||++|+++|+ +. | ++|++++|.... ... ...+++++.+|+.|.+++.+++.++|.
T Consensus 1 M~vlVTGatG~iG~~l~~~L~-~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 79 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLL-AGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDA 79 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred CeEEEECCccHHHHHHHHHHH-hhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence 479999999999999999999 44 7 999999996521 111 125789999999999999999999999
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
|+|+++......+..++.+.+++|+.++.+++++|.+.. ..+++++|+..+|+... ..+++|+++..|..+
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vyg~~~-------~~~~~E~~~~~~~~~ 150 (337)
T 1r6d_A 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSID-------SGSWTESSPLEPNSP 150 (337)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCS-------SSCBCTTSCCCCCSH
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHhCCCC-------CCCCCCCCCCCCCCc
Confidence 999987543222222334578999999999999999863 34666666666775432 346788877665666
Q ss_pred cchHHHHHHHHHH-----h--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccC
Q 042242 176 NFYYVLEDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 176 ~~~y~~~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (303)
|+.+|...|. . .+ ++++++||+.+||++... ..+...+ ...+.+ +.++.+.+.. .+..++
T Consensus 151 ---Y~~sK~~~e~~~~~~~~~~g-~~~~ilrp~~v~G~~~~~-~~~~~~~--~~~~~~--~~~~~~~~~~----~~~~~~ 217 (337)
T 1r6d_A 151 ---YAASKAGSDLVARAYHRTYG-LDVRITRCCNNYGPYQHP-EKLIPLF--VTNLLD--GGTLPLYGDG----ANVREW 217 (337)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHC-CCEEEEEECEEECTTCCT-TSHHHHH--HHHHHT--TCCEEEETTS----CCEEEE
T ss_pred ---hHHHHHHHHHHHHHHHHHHC-CCEEEEEeeeeECCCCCC-CChHHHH--HHHHhc--CCCcEEeCCC----CeeEee
Confidence 8888877762 2 24 899999999999975431 1221111 111222 3444443332 455678
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
++++|+|++++.++..+. . |++||+++++.+|+.|+++.+++.+|.+.
T Consensus 218 i~v~Dva~a~~~~~~~~~-~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~~ 265 (337)
T 1r6d_A 218 VHTDDHCRGIALVLAGGR-A---GEIYHIGGGLELTNRELTGILLDSLGADW 265 (337)
T ss_dssp EEHHHHHHHHHHHHHHCC-T---TCEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred EeHHHHHHHHHHHHhCCC-C---CCEEEeCCCCCccHHHHHHHHHHHhCCCc
Confidence 899999999999887542 2 47999999999999999999999999864
No 24
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=99.97 E-value=2e-29 Score=220.93 Aligned_cols=253 Identities=12% Similarity=0.047 Sum_probs=179.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCccc---c---ccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEIT---A---IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~---~---~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
|+|||||||||||++|+++|++.. |++|++++|++... . ....+++++.+|++|.+++.++++++|.|+|+++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 84 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 84 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence 699999999999999999999432 89999999975321 1 1235789999999999999999999998999987
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccC-----CCcccccCCcCcCCCCCCCCcc
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQG-----LPEEKQVRFYDEECPRVSKSNN 176 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~-----~~g~~~~~~~~e~~~~~p~~~~ 176 (303)
......+..+..+.+++|+.++.+++++|.+.+ . +++++|+..+|+.... ..+.....+++|+++..|..+
T Consensus 85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~--~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~- 160 (348)
T 1oc2_A 85 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP- 160 (348)
T ss_dssp CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSH-
T ss_pred ccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC--C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCc-
Confidence 543222222334578999999999999999874 2 6666666667754311 000001256788877665666
Q ss_pred chHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 177 FYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 177 ~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
|+.+|...|. .. + ++++++||+.+||++... ..+...+ ...+.+ +.++.+.+.. ....+++
T Consensus 161 --Y~~sK~~~e~~~~~~~~~~g-i~~~ilrp~~v~G~~~~~-~~~~~~~--~~~~~~--~~~~~~~~~~----~~~~~~i 228 (348)
T 1oc2_A 161 --YSSTKAASDLIVKAWVRSFG-VKATISNCSNNYGPYQHI-EKFIPRQ--ITNILA--GIKPKLYGEG----KNVRDWI 228 (348)
T ss_dssp --HHHHHHHHHHHHHHHHHHHC-CEEEEEEECCEESTTCCT-TSHHHHH--HHHHHH--TCCCEEETTS----CCEEECE
T ss_pred --cHHHHHHHHHHHHHHHHHhC-CCEEEEeeceeeCCCCCc-cchHHHH--HHHHHc--CCCceEecCC----CceEeeE
Confidence 8888877762 22 4 899999999999975431 1221111 111222 3333333322 4556789
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+++|+|++++.++..+ .. |++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 229 ~v~Dva~~~~~~~~~~-~~---g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 276 (348)
T 1oc2_A 229 HTNDHSTGVWAILTKG-RM---GETYLIGADGEKNNKEVLELILEKMGQPKD 276 (348)
T ss_dssp EHHHHHHHHHHHHHHC-CT---TCEEEECCSCEEEHHHHHHHHHHHTTCCTT
T ss_pred EHHHHHHHHHHHhhCC-CC---CCeEEeCCCCCCCHHHHHHHHHHHhCCCcc
Confidence 9999999999988654 22 489999999999999999999999998753
No 25
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.2e-29 Score=215.13 Aligned_cols=232 Identities=18% Similarity=0.114 Sum_probs=162.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc--
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS-- 106 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~-- 106 (303)
|||||||||||||++|+++|+ +.||+|++++|++.... +..| +...+.++++|.|+|+++.....
T Consensus 1 MkILVTGatGfIG~~L~~~L~-~~G~~V~~l~R~~~~~~--------~~~~----~~~~~~l~~~d~vihla~~~i~~~~ 67 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLN-ARGHEVTLVSRKPGPGR--------ITWD----ELAASGLPSCDAAVNLAGENILNPL 67 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCTTE--------EEHH----HHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCCcCe--------eecc----hhhHhhccCCCEEEEeccCcccchh
Confidence 589999999999999999999 68999999999865421 1122 23345667888899997643222
Q ss_pred --CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 107 --QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 107 --~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
.+.....+..+.|+.++.++++++.....+...+++.|+..+|+.. ...+..|++|..|.+. |+..+.
T Consensus 68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~-------~~~~~~E~~p~~~~~~---~~~~~~ 137 (298)
T 4b4o_A 68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPS-------LTAEYDEDSPGGDFDF---FSNLVT 137 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCC-------SSCCBCTTCCCSCSSH---HHHHHH
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCC-------CCCcccccCCccccch---hHHHHH
Confidence 2234444588999999999999999876556666666776677554 2456788877654444 554443
Q ss_pred HHHHh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHH
Q 042242 185 LKEKL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIW 260 (303)
Q Consensus 185 ~~e~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~ 260 (303)
..+.. ... ++++++||+.|||++.... .. +....+ .+.... .|+. .++.+++|++|+|++++.
T Consensus 138 ~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~----~~---~~~~~~-~~~~~~-~g~g----~~~~~~ihv~Dva~a~~~ 204 (298)
T 4b4o_A 138 KWEAAARLPGDSTRQVVVRSGVVLGRGGGAM----GH---MLLPFR-LGLGGP-IGSG----HQFFPWIHIGDLAGILTH 204 (298)
T ss_dssp HHHHHHCCSSSSSEEEEEEECEEECTTSHHH----HH---HHHHHH-TTCCCC-BTTS----CSBCCEEEHHHHHHHHHH
T ss_pred HHHHHHHhhccCCceeeeeeeeEEcCCCCch----hH---HHHHHh-cCCcce-eccc----CceeecCcHHHHHHHHHH
Confidence 33321 222 8999999999999643211 11 111111 122222 2333 566788999999999999
Q ss_pred HhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 261 VATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 261 ~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
++.++... ++||+++++++|++|+++.+++++|+|.
T Consensus 205 ~~~~~~~~----g~yn~~~~~~~t~~e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 205 ALEANHVH----GVLNGVAPSSATNAEFAQTFGAALGRRA 240 (298)
T ss_dssp HHHCTTCC----EEEEESCSCCCBHHHHHHHHHHHHTCCC
T ss_pred HHhCCCCC----CeEEEECCCccCHHHHHHHHHHHhCcCC
Confidence 99887543 5999999999999999999999999874
No 26
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=99.97 E-value=2.1e-29 Score=223.30 Aligned_cols=250 Identities=15% Similarity=0.080 Sum_probs=175.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc--cc-CCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA--IQ-SSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~--~~-~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
.++|+|||||||||||++|+++|+ +.| ++|++++|++.... .. ..+++++.+|+.|.+++.++++++|.|+|+++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLL-ELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHH-HTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHH-HcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 345799999999999999999999 578 99999999865432 21 45789999999999999999999999999987
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcC--cCC---CC-CCCCc
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD--EEC---PR-VSKSN 175 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~--e~~---~~-~p~~~ 175 (303)
......+..++.+.+++|+.++.+++++|++.. ...+++++|+..+|+... ..++. |++ +. .|..+
T Consensus 109 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~-------~~~~~~~E~~~~~~~~~~~~~ 180 (377)
T 2q1s_A 109 YHGNQSSIHDPLADHENNTLTTLKLYERLKHFK-RLKKVVYSAAGCSIAEKT-------FDDAKATEETDIVSLHNNDSP 180 (377)
T ss_dssp CSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCS-SCCEEEEEEEC---------------------CCCCCCCSSCCCSH
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHcCCCC-------CCCcCcccccccccccCCCCc
Confidence 543322223445588999999999999998751 244666666666775431 33566 766 44 44555
Q ss_pred cchHHHHHHHHHH-----hc--CCcceEEecCCceeecCC---------CCc---cchhhHHHHHHHHhhhCCCceeeCC
Q 042242 176 NFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSH---------RSL---YNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 176 ~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
|+.+|...|. .. + ++++++||+.|||++. ... ..+...+ ...+.+ +.++...+
T Consensus 181 ---Y~~sK~~~E~~~~~~~~~~g-i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~--g~~~~~~g 252 (377)
T 2q1s_A 181 ---YSMSKIFGEFYSVYYHKQHQ-LPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTF--IYKALK--GMPLPLEN 252 (377)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHC-CCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHH--HHHHHT--TCCCCCSG
T ss_pred ---hHHHHHHHHHHHHHHHHHhC-CCEEEEeeccEECCCCcccccccccCcccccccHHHHH--HHHHHc--CCCeEEeC
Confidence 8887777662 22 4 8999999999999754 110 1111111 111222 44444444
Q ss_pred chhhhhhhcccCccHHHHHHH-HHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQ-HIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a-~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
.. ....++++++|+|++ ++.++..+. .| +||+++++.+|+.|+++.+++.+|.+.+
T Consensus 253 ~g----~~~~~~i~v~Dva~a~i~~~~~~~~----~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 309 (377)
T 2q1s_A 253 GG----VATRDFIFVEDVANGLIACAADGTP----GG-VYNIASGKETSIADLATKINEITGNNTE 309 (377)
T ss_dssp GG----CCEECCEEHHHHHHHHHHHHHHCCT----TE-EEECCCCCCEEHHHHHHHHHHHHTCCSC
T ss_pred CC----CeEEeeEEHHHHHHHHHHHHHhcCC----CC-eEEecCCCceeHHHHHHHHHHHhCCCCC
Confidence 33 466789999999999 888887753 24 9999999999999999999999998754
No 27
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2e-29 Score=220.38 Aligned_cols=240 Identities=15% Similarity=0.108 Sum_probs=172.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
++|||||||||||++|+++|+ ..|++|++++|++.+.. ....+++++.+|+.|.+++.++++++|.|+|+++....
T Consensus 14 M~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~-- 90 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIR-AAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPS-- 90 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--------
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcC--
Confidence 589999999999999999999 68999999999876543 22237889999999999999999999999999775321
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC----CCccchHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS----KSNNFYYVLED 183 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p----~~~~~~y~~~k 183 (303)
...+..+.+++|+.++.+++++|.+.+ ..+++++|+..+|+.... ...+ +|+++..| ..+ |+.+|
T Consensus 91 ~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~~~~~-----~~~~-~E~~~~~p~~~~~~~---Y~~sK 159 (342)
T 2x4g_A 91 RPRRWQEEVASALGQTNPFYAACLQAR--VPRILYVGSAYAMPRHPQ-----GLPG-HEGLFYDSLPSGKSS---YVLCK 159 (342)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHT--CSCEEEECCGGGSCCCTT-----SSCB-CTTCCCSSCCTTSCH---HHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEECCHHhhCcCCC-----CCCC-CCCCCCCccccccCh---HHHHH
Confidence 222334478999999999999999863 446666666667754321 0134 77777766 445 88887
Q ss_pred HHHHH-----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHH
Q 042242 184 LLKEK-----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQ 257 (303)
Q Consensus 184 ~~~e~-----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a 257 (303)
...|. . .+ ++++++||+.+||+..... . ...+ ...+.. +.+..+ + ....++++++|+|++
T Consensus 160 ~~~e~~~~~~~~~g-~~~~ilrp~~v~g~~~~~~-~-~~~~--~~~~~~--~~~~~~-~------~~~~~~i~v~Dva~~ 225 (342)
T 2x4g_A 160 WALDEQAREQARNG-LPVVIGIPGMVLGELDIGP-T-TGRV--ITAIGN--GEMTHY-V------AGQRNVIDAAEAGRG 225 (342)
T ss_dssp HHHHHHHHHHHHTT-CCEEEEEECEEECSCCSSC-S-TTHH--HHHHHT--TCCCEE-E------CCEEEEEEHHHHHHH
T ss_pred HHHHHHHHHHhhcC-CcEEEEeCCceECCCCccc-c-HHHH--HHHHHc--CCCccc-c------CCCcceeeHHHHHHH
Confidence 77762 1 24 9999999999999754111 1 1111 111222 333333 3 455678899999999
Q ss_pred HHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 258 HIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 258 ~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++.++..+.. +++||+++++ +|+.|+++.+.+.+|++.+
T Consensus 226 ~~~~~~~~~~----g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~ 264 (342)
T 2x4g_A 226 LLMALERGRI----GERYLLTGHN-LEMADLTRRIAELLGQPAP 264 (342)
T ss_dssp HHHHHHHSCT----TCEEEECCEE-EEHHHHHHHHHHHHTCCCC
T ss_pred HHHHHhCCCC----CceEEEcCCc-ccHHHHHHHHHHHhCCCCC
Confidence 9999877643 3899999999 9999999999999998753
No 28
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=99.97 E-value=5.4e-29 Score=217.85 Aligned_cols=254 Identities=15% Similarity=0.202 Sum_probs=178.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCH-HHHHHHHhccCceeEEeecccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNP-LDIKRKLTLLEDVTHIFWVTWA 105 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~-~~l~~~~~~~~~V~~~~~~~~~ 105 (303)
|+|||||||||||++++++|++..|++|++++|++.+.. ....+++++.+|+.|. +.+.++++++|.|+|+++....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~ 80 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence 489999999999999999999433899999999876533 2345789999999984 6788899999999999875432
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC---C-CCccchHHH
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV---S-KSNNFYYVL 181 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~---p-~~~~~~y~~ 181 (303)
.....++.+.+++|+.++.+++++|++.+ .+++++|+..+|+... ..+++|+++.. | ..|...|+.
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~SS~~v~g~~~-------~~~~~e~~~~~~~~~~~~~~~~Y~~ 150 (345)
T 2bll_A 81 IEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVYGMCS-------DKYFDEDHSNLIVGPVNKPRWIYSV 150 (345)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGGBTCC-------CSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred cchhcCHHHHHHHHHHHHHHHHHHHHHhC---CeEEEEecHHHcCCCC-------CCCcCCcccccccCcccCcccccHH
Confidence 22223444588999999999999998764 5777777766775442 33566666432 1 123334888
Q ss_pred HHHHHHH-----hc--CCcceEEecCCceeecCCCCcc----chhhHHHHHH-HHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 182 EDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLY----NFLGCLCVYG-AVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 182 ~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
+|...|. .. + ++++++||+.|||++..... .....+..+. .+.+ +.++...+.. .+..+++
T Consensus 151 sK~~~e~~~~~~~~~~~-~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g----~~~~~~i 223 (345)
T 2bll_A 151 SKQLLDRVIWAYGEKEG-LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE--GSPIKLIDGG----KQKRCFT 223 (345)
T ss_dssp HHHHHHHHHHHHHHHHC-CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH--TCCEEEGGGS----CCEEECE
T ss_pred HHHHHHHHHHHHHHhcC-CCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHc--CCCcEEECCC----CEEEEEE
Confidence 8777662 22 4 89999999999997643210 0001111111 1222 4454444432 4556789
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCC-CccHHhhHHHHHHHhcccC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGP-RFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~-~~s~~e~~~~i~~~~g~~~ 300 (303)
+++|+|++++.++..+... ..+++||+++++ .+|+.|+++.+++.+|.+.
T Consensus 224 ~v~Dva~a~~~~~~~~~~~-~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~ 274 (345)
T 2bll_A 224 DIRDGIEALYRIIENAGNR-CDGEIINIGNPENEASIEELGEMLLASFEKHP 274 (345)
T ss_dssp EHHHHHHHHHHHHHCGGGT-TTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred EHHHHHHHHHHHHhhcccc-CCCceEEeCCCCCCCCHHHHHHHHHHHhCCCc
Confidence 9999999999998765411 124899999986 8999999999999998764
No 29
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.97 E-value=1.7e-28 Score=217.29 Aligned_cols=250 Identities=15% Similarity=0.079 Sum_probs=178.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-----c-c-------cCCCeEEEEecCCCHHHHHHHHhcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-----A-I-------QSSSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----~-~-------~~~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
|+++|||||||||||++|+++|+ +.|++|++++|++... . . ...+++++.+|+.|.+++.++++++
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLL-EKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 101 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred cCcEEEEECCCchHHHHHHHHHH-HCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence 55799999999999999999999 5799999999986531 1 1 1246889999999999999999875
Q ss_pred --CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC-CccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 94 --EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK-ALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 94 --~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
|.|+|+++......+..++.+.+++|+.++.++++++.+... +..+++++|+..+|+.. ...+++|+++.
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~-------~~~~~~E~~~~ 174 (375)
T 1t2a_A 102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKV-------QEIPQKETTPF 174 (375)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSC-------SSSSBCTTSCC
T ss_pred CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCC-------CCCCCCccCCC
Confidence 779999875433222334455889999999999999987632 11466666666677543 23467888876
Q ss_pred CCCCccchHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCccchhh-HHHHHH-HHhhhCCCceeeCCchhhh
Q 042242 171 VSKSNNFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLG-CLCVYG-AVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~g~~~~~ 241 (303)
.|..+ |+.+|...|. .. + ++++++||+.+||++... ++.. .+..+. .+..+ ..+....|..
T Consensus 175 ~~~~~---Y~~sK~~~e~~~~~~~~~~~-~~~~i~r~~~~~gp~~~~--~~~~~~~~~~~~~~~~g-~~~~~~~g~~--- 244 (375)
T 1t2a_A 175 YPRSP---YGAAKLYAYWIVVNFREAYN-LFAVNGILFNHESPRRGA--NFVTRKISRSVAKIYLG-QLECFSLGNL--- 244 (375)
T ss_dssp CCCSH---HHHHHHHHHHHHHHHHHHHC-CEEEEEEECCEECTTSCT--TSHHHHHHHHHHHHHHT-SCSCEEESCT---
T ss_pred CCCCh---hHHHHHHHHHHHHHHHHHhC-CCEEEEecccccCCCCCC--CcchHHHHHHHHHHHcC-CCceeEeCCC---
Confidence 66666 8888887762 22 4 899999999999975332 1111 111111 12221 1222223332
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
....++++++|+|++++.++..+. + ++||+++++.+|+.|+++.+++.+|.+.
T Consensus 245 -~~~~~~i~v~Dva~a~~~~~~~~~--~---~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 297 (375)
T 1t2a_A 245 -DAKRDWGHAKDYVEAMWLMLQNDE--P---EDFVIATGEVHSVREFVEKSFLHIGKTI 297 (375)
T ss_dssp -TCEECCEEHHHHHHHHHHHHHSSS--C---CCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred -CceeeeEEHHHHHHHHHHHHhcCC--C---ceEEEeCCCcccHHHHHHHHHHHhCCCc
Confidence 456788999999999999887653 2 6899999999999999999999999763
No 30
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=99.97 E-value=3.5e-29 Score=213.56 Aligned_cols=224 Identities=15% Similarity=0.166 Sum_probs=166.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTW 104 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~ 104 (303)
.|+++|||||| ||||++|+++|+ +.||+|++++|++.+.. ....+++++.+|+.|.+ ++++|.|+|+++...
T Consensus 3 ~m~~~ilVtGa-G~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTARVLSRALA-PQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDS 75 (286)
T ss_dssp --CCEEEEETC-CHHHHHHHHHHG-GGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBT
T ss_pred CCcCcEEEECC-cHHHHHHHHHHH-HCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCccc
Confidence 35689999998 999999999999 67999999999876543 23468999999999954 778888999976532
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
.. .+ .+.++++++++...++.++++.|+..+|+.. ...+++|+++..|.++ |+.+|.
T Consensus 76 ~~----~~---------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~-------~~~~~~E~~~~~p~~~---Y~~sK~ 132 (286)
T 3ius_A 76 GG----DP---------VLAALGDQIAARAAQFRWVGYLSTTAVYGDH-------DGAWVDETTPLTPTAA---RGRWRV 132 (286)
T ss_dssp TB----CH---------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCC-------TTCEECTTSCCCCCSH---HHHHHH
T ss_pred cc----cH---------HHHHHHHHHHhhcCCceEEEEeecceecCCC-------CCCCcCCCCCCCCCCH---HHHHHH
Confidence 21 11 2356888888743345677777776677554 2456888888777766 999888
Q ss_pred HHHHh---c-CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHH
Q 042242 185 LKEKL---A-GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIW 260 (303)
Q Consensus 185 ~~e~~---~-~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~ 260 (303)
..|.. . + ++++++||+.+||++.... . . +.+ +.+..+.+. ....++++++|+|++++.
T Consensus 133 ~~E~~~~~~~~-~~~~ilRp~~v~G~~~~~~-~---~------~~~--~~~~~~~~~-----~~~~~~i~v~Dva~a~~~ 194 (286)
T 3ius_A 133 MAEQQWQAVPN-LPLHVFRLAGIYGPGRGPF-S---K------LGK--GGIRRIIKP-----GQVFSRIHVEDIAQVLAA 194 (286)
T ss_dssp HHHHHHHHSTT-CCEEEEEECEEEBTTBSSS-T---T------SSS--SCCCEEECT-----TCCBCEEEHHHHHHHHHH
T ss_pred HHHHHHHhhcC-CCEEEEeccceECCCchHH-H---H------Hhc--CCccccCCC-----CcccceEEHHHHHHHHHH
Confidence 88732 2 4 9999999999999754321 1 1 111 333333332 345678999999999999
Q ss_pred HhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 261 VATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 261 ~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++..+. . +++||+++++.+|+.|+++.+++.+|++.+
T Consensus 195 ~~~~~~-~---g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 231 (286)
T 3ius_A 195 SMARPD-P---GAVYNVCDDEPVPPQDVIAYAAELQGLPLP 231 (286)
T ss_dssp HHHSCC-T---TCEEEECCSCCBCHHHHHHHHHHHHTCCCC
T ss_pred HHhCCC-C---CCEEEEeCCCCccHHHHHHHHHHHcCCCCC
Confidence 998875 3 379999999999999999999999998865
No 31
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=218.81 Aligned_cols=247 Identities=14% Similarity=0.035 Sum_probs=173.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCceeEEeecc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTHIFWVT 103 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~~~~ 103 (303)
+++|+|||||||||||++|+++|+ +.|+ +.... ...++++.+|+.|.+.+.+++++ +|.|+|+++..
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~-~~g~------~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~ 72 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVA-DGAG------LPGED----WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV 72 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHH-TTTC------CTTCE----EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHH-hcCC------ccccc----ccccCceecccCCHHHHHHHHhhcCCCEEEECceec
Confidence 467899999999999999999999 6776 22111 12344557999999999999998 77899998763
Q ss_pred cc-cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC-CCCccc-hHH
Q 042242 104 WA-SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV-SKSNNF-YYV 180 (303)
Q Consensus 104 ~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~-p~~~~~-~y~ 180 (303)
.. .....++.+.+++|+.++.+++++|++.+ +.+++++|+..+|+.. ...+++|+++.. +..|.. .|+
T Consensus 73 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~v~~SS~~vyg~~-------~~~~~~E~~~~~~~~~p~~~~Y~ 143 (319)
T 4b8w_A 73 GGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG--ARKVVSCLSTCIFPDK-------TTYPIDETMIHNGPPHNSNFGYS 143 (319)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSCSS-------CCSSBCGGGGGBSCCCSSSHHHH
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEcchhhcCCC-------CCCCccccccccCCCCCCcchHH
Confidence 21 11223344589999999999999998763 4567777776677543 245677876321 122322 288
Q ss_pred HHHHHHHH-----h--cCCcceEEecCCceeecCCCCcc---chhhHHHHHH-H-HhhhCCCceeeCCchhhhhhhcccC
Q 042242 181 LEDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSLY---NFLGCLCVYG-A-VCKHLNLPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 181 ~~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (303)
.+|...|. . .+ ++++++||+.+||++..... .++..+.... . +.. +.++.+.|.. ....++
T Consensus 144 ~sK~~~E~~~~~~~~~~~-~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g----~~~~~~ 216 (319)
T 4b8w_A 144 YAKRMIDVQNRAYFQQYG-CTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSS--GSALTVWGTG----NPRRQF 216 (319)
T ss_dssp HHHHHHHHHHHHHHHHHC-CEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHH--TCCEEEESCS----CCEECE
T ss_pred HHHHHHHHHHHHHHHhhC-CCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhcc--CCceEEeCCC----CeeEEE
Confidence 88777762 1 24 99999999999997653211 1222211111 0 122 4555554443 556788
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++++|+|++++.++..+... .+++||+++++.+|+.|+++.+++.+|++.+
T Consensus 217 i~v~Dva~a~~~~~~~~~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 267 (319)
T 4b8w_A 217 IYSLDLAQLFIWVLREYNEV--EPIILSVGEEDEVSIKEAAEAVVEAMDFHGE 267 (319)
T ss_dssp EEHHHHHHHHHHHHHHCCCS--SCEEECCCGGGCEEHHHHHHHHHHHTTCCSC
T ss_pred EeHHHHHHHHHHHHhccccC--CceEEEecCCCceeHHHHHHHHHHHhCCCCc
Confidence 99999999999998875432 2479999999999999999999999998754
No 32
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=99.97 E-value=3.1e-28 Score=211.98 Aligned_cols=244 Identities=12% Similarity=0.030 Sum_probs=175.5
Q ss_pred cCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHh--ccCce
Q 042242 22 GREVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLT--LLEDV 96 (303)
Q Consensus 22 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V 96 (303)
++..+.+|+|||||||||||++|+++|+ +.|++|++++|+..... ....+++++.+|+.|.+++.++++ ++|.|
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~v 92 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWL-PQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHV 92 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHG-GGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEE
Confidence 3445567899999999999999999999 67999999999754422 112578899999999999999999 88889
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCcc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNN 176 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~ 176 (303)
+|+|+..... +..++ + +++|+.++.++++++.+.. ..+++++|+..+|+.... ...+++|++ .|..+
T Consensus 93 ih~A~~~~~~-~~~~~-~-~~~N~~~~~~l~~a~~~~~--~~~iV~~SS~~~~~~~~~-----~~~~~~E~~--~~~~~- 159 (330)
T 2pzm_A 93 VHSAAAYKDP-DDWAE-D-AATNVQGSINVAKAASKAG--VKRLLNFQTALCYGRPAT-----VPIPIDSPT--APFTS- 159 (330)
T ss_dssp EECCCCCSCT-TCHHH-H-HHHHTHHHHHHHHHHHHHT--CSEEEEEEEGGGGCSCSS-----SSBCTTCCC--CCCSH-
T ss_pred EECCccCCCc-cccCh-h-HHHHHHHHHHHHHHHHHcC--CCEEEEecCHHHhCCCcc-----CCCCcCCCC--CCCCh-
Confidence 9998764332 22333 2 8999999999999998763 345666665556744311 011566766 33455
Q ss_pred chHHHHHHHHHHh-cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHH
Q 042242 177 FYYVLEDLLKEKL-AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLV 254 (303)
Q Consensus 177 ~~y~~~k~~~e~~-~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (303)
|+.+|...|.. ... ++++++||+++||++.. .++...+ ...+.. +.+....+ . ..++++++|+
T Consensus 160 --Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~--~~~~~~~--~~~~~~--~~~~~~~~------~-~~~~i~~~Dv 224 (330)
T 2pzm_A 160 --YGISKTAGEAFLMMSDVPVVSLRLANVTGPRLA--IGPIPTF--YKRLKA--GQKCFCSD------T-VRDFLDMSDF 224 (330)
T ss_dssp --HHHHHHHHHHHHHTCSSCEEEEEECEEECTTCC--SSHHHHH--HHHHHT--TCCCCEES------C-EECEEEHHHH
T ss_pred --HHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCC--CCHHHHH--HHHHHc--CCEEeCCC------C-EecceeHHHH
Confidence 99999888843 222 89999999999997641 1221111 111222 22222122 3 4568899999
Q ss_pred HH-HHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 255 AE-QHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 255 a~-a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
|+ +++.++..+. + ++||+++++.+|+.|+++.+++.+|++
T Consensus 225 a~~a~~~~~~~~~--g---~~~~v~~~~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 225 LAIADLSLQEGRP--T---GVFNVSTGEGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp HHHHHHHTSTTCC--C---EEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhcCC--C---CEEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence 99 9998887653 3 899999999999999999999999986
No 33
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=99.97 E-value=6.3e-29 Score=218.90 Aligned_cols=256 Identities=16% Similarity=0.132 Sum_probs=177.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc--cc-c----cCCCeEEEEecCCCHHHHHHHHh--ccCceeEE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI--TA-I----QSSSYCFISCDLLNPLDIKRKLT--LLEDVTHI 99 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~-~----~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~ 99 (303)
|+||||||+||||++|+++|++..|++|++++|+... .. . ...+++++.+|+.|.+++.++++ ++|.|+|+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 3799999999999999999995348999999997521 11 1 12478899999999999999998 78889999
Q ss_pred eecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc-------EEEEeecccccccccC---CCcccccCCcCcCCC
Q 042242 100 FWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK-------HVSLQTGMKHYVSLQG---LPEEKQVRFYDEECP 169 (303)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~-------~~~~~s~~~~y~~~~~---~~g~~~~~~~~e~~~ 169 (303)
|+......+..+..+.+++|+.++.+++++|.+....+. +++++|+..+|+.... .....+..+++|+++
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~ 160 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence 876432222233345889999999999999987621222 6666666667754310 000001126778777
Q ss_pred CCCCCccchHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 170 RVSKSNNFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
..|.++ |+.+|...|. .. + ++++++||+.|||+.... ..+...+ ...+.+ +.++...+..
T Consensus 161 ~~~~~~---Y~~sK~~~e~~~~~~~~~~g-i~~~~vrp~~v~G~~~~~-~~~~~~~--~~~~~~--~~~~~~~~~~---- 227 (361)
T 1kew_A 161 YAPSSP---YSASKASSDHLVRAWRRTYG-LPTIVTNCSNNYGPYHFP-EKLIPLV--ILNALE--GKPLPIYGKG---- 227 (361)
T ss_dssp CCCCSH---HHHHHHHHHHHHHHHHHHHC-CCEEEEEECEEESTTCCT-TSHHHHH--HHHHHH--TCCEEEETTS----
T ss_pred CCCCCc---cHHHHHHHHHHHHHHHHHhC-CcEEEEeeceeECCCCCc-ccHHHHH--HHHHHc--CCCceEcCCC----
Confidence 665566 8888877762 22 4 899999999999975421 1111111 111222 3344433332
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
....++++++|+|++++.++..+ .. |++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 228 ~~~~~~i~v~Dva~a~~~~~~~~-~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~ 282 (361)
T 1kew_A 228 DQIRDWLYVEDHARALHMVVTEG-KA---GETYNIGGHNEKKNLDVVFTICDLLDEIVP 282 (361)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHHC-CT---TCEEEECCCCEEEHHHHHHHHHHHHHHHSC
T ss_pred ceeEeeEEHHHHHHHHHHHHhCC-CC---CCEEEecCCCeeeHHHHHHHHHHHhCCcCc
Confidence 45567889999999999988654 22 479999999999999999999999987653
No 34
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=99.97 E-value=2.1e-29 Score=217.52 Aligned_cols=249 Identities=14% Similarity=0.050 Sum_probs=176.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh--ccCceeEEeecc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFWVT 103 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~~~ 103 (303)
|+|+|||||||||||++|+++|++. .|++|++++|++..... ..+++++.+|+.|.+++.++++ ++|.|+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 79 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV-VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL 79 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH-HHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc-cCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 4678999999999999999999943 28999999998765321 2367889999999999999998 778899997653
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHH
Q 042242 104 WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLED 183 (303)
Q Consensus 104 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k 183 (303)
.. ....++.+.+++|+.++.+++++|++.+ ..+++++|+..+|+.... ..+..|+.+..|.++ |+.+|
T Consensus 80 ~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~------~~~~~e~~~~~~~~~---Y~~sK 147 (312)
T 2yy7_A 80 SA-TAEKNPAFAWDLNMNSLFHVLNLAKAKK--IKKIFWPSSIAVFGPTTP------KENTPQYTIMEPSTV---YGISK 147 (312)
T ss_dssp HH-HHHHCHHHHHHHHHHHHHHHHHHHHTTS--CSEEECCEEGGGCCTTSC------SSSBCSSCBCCCCSH---HHHHH
T ss_pred CC-chhhChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHHhCCCCC------CCCccccCcCCCCch---hHHHH
Confidence 22 1223344589999999999999998753 456777776667754321 235677777665666 88888
Q ss_pred HHHHH-----hc--CCcceEEecCCceeecCCCCcc---chhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHH
Q 042242 184 LLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLY---NFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRL 253 (303)
Q Consensus 184 ~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 253 (303)
...|. .. + ++++++||+.+||+...... +.... .+....+ +.++...+.. ....++++++|
T Consensus 148 ~~~e~~~~~~~~~~~-~~~~~lrp~~v~g~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~----~~~~~~i~v~D 218 (312)
T 2yy7_A 148 QAGERWCEYYHNIYG-VDVRSIRYPGLISWSTPPGGGTTDYAVD--IFYKAIA--DKKYECFLSS----ETKMPMMYMDD 218 (312)
T ss_dssp HHHHHHHHHHHHHHC-CEEECEEECEEECSSSCCCSCTTTHHHH--HHHHHHH--TSEEEESSCT----TCCEEEEEHHH
T ss_pred HHHHHHHHHHHHhcC-CcEEEEeCCeEecCCCCCCCchhhhHHH--HHHHHHc--CCCeEEecCC----CceeeeeeHHH
Confidence 77762 22 4 89999999999996522111 11111 1111111 2233333332 45578899999
Q ss_pred HHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 254 VAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 254 ~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
+|++++.++..+......+++||+++ +.+|+.|+++.+++.+|.
T Consensus 219 va~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 219 AIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp HHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC
Confidence 99999999887643100137999996 789999999999999883
No 35
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=99.96 E-value=1.6e-28 Score=215.06 Aligned_cols=260 Identities=17% Similarity=0.180 Sum_probs=175.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc-cc-----c-cCCCeEEEEecCCCHHHHHHHHhc--cCceeEE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI-TA-----I-QSSSYCFISCDLLNPLDIKRKLTL--LEDVTHI 99 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~-----~-~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~ 99 (303)
|+|||||||||||++|+++|+ +.|++|++++|.... .. . ...+++++.+|++|.+++.+++++ +|.|+|+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFAL-SQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHH-hCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 689999999999999999999 689999999985321 10 1 123588999999999999999998 8889999
Q ss_pred eecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccc---------ccCCcCcCCCC
Q 042242 100 FWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEK---------QVRFYDEECPR 170 (303)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~---------~~~~~~e~~~~ 170 (303)
|+......+..++.+.+++|+.++.+++++|++...+ .+++++|+..+|+......-.. ...+.+|+.+.
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~-~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~ 159 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN-CNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 159 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-ceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCC
Confidence 8754332223344558899999999999999987422 2556666656775432100000 01124555554
Q ss_pred CCCCccchHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCcc--chhhHHHHHHHHhhhCC--CceeeCCchh
Q 042242 171 VSKSNNFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLY--NFLGCLCVYGAVCKHLN--LPFVFGGTRE 239 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~g~~~ 239 (303)
.|..+ |+.+|...|. .. + ++++++||+.|||+...... .....+. ...+....+ .++...|..
T Consensus 160 ~~~~~---Y~~sK~~~E~~~~~~~~~~g-i~~~ilrp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~g- 233 (347)
T 1orr_A 160 DFHSP---YGCSKGAADQYMLDYARIFG-LNTVVFRHSSMYGGRQFATYDQGWVGWFC-QKAVEIKNGINKPFTISGNG- 233 (347)
T ss_dssp CCCHH---HHHHHHHHHHHHHHHHHHHC-CEEEEEEECCEECTTCCCBTTBCHHHHHH-HHHHHHHTTCCCCEEEESSS-
T ss_pred CCCCc---hHHHHHHHHHHHHHHHHHhC-CcEEEEccCceeCcCCCCCCcCcHHHHHH-HHHHhCcccCCCCeEEecCC-
Confidence 44444 8888877662 22 4 89999999999997543211 1111111 111111110 144444433
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC--CccHHhhHHHHHHHhcccCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP--RFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~--~~s~~e~~~~i~~~~g~~~~ 301 (303)
.+..++++++|+|++++.++..+.. ..|++||++++. .+|+.|+++.+++.+|.+.+
T Consensus 234 ---~~~~~~i~v~Dva~a~~~~~~~~~~--~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~ 292 (347)
T 1orr_A 234 ---KQVRDVLHAEDMISLYFTALANVSK--IRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR 292 (347)
T ss_dssp ---CCEEECEEHHHHHHHHHHHHHTHHH--HTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC
T ss_pred ---cceEeeEEHHHHHHHHHHHHhcccc--CCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCC
Confidence 4567789999999999998875221 224799999987 49999999999999998754
No 36
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=99.96 E-value=3.4e-28 Score=215.82 Aligned_cols=251 Identities=14% Similarity=0.068 Sum_probs=177.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---cc---------CC-CeEEEEecCCCHHHHHHHHh
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQ---------SS-SYCFISCDLLNPLDIKRKLT 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~---------~~-~~~~~~~D~~~~~~l~~~~~ 91 (303)
..|+++|||||||||||++|+++|+ ..|++|++++|++.... .. .. +++++.+|+.|.+++.++++
T Consensus 25 ~~M~k~vlVtGatG~IG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 103 (381)
T 1n7h_A 25 VEPRKIALITGITGQDGSYLTEFLL-GKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWID 103 (381)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHH
T ss_pred hhhCCeEEEEcCCchHHHHHHHHHH-HCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHH
Confidence 3355799999999999999999999 57999999999865411 11 12 78899999999999999998
Q ss_pred cc--CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCC---ccEEEEeecccccccccCCCcccccCCcCc
Q 042242 92 LL--EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKA---LKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 92 ~~--~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~---~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
++ |.|+|+++......+..+..+.+++|+.++.+++++|.+...+ -.+++++|+..+|+... . +++|
T Consensus 104 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~-------~-~~~E 175 (381)
T 1n7h_A 104 VIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-------P-PQSE 175 (381)
T ss_dssp HHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-------S-SBCT
T ss_pred hcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCC-------C-CCCC
Confidence 75 7799998754332223344558899999999999999876311 12666666666775441 2 6788
Q ss_pred CCCCCCCCccchHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCccchhhH-HHHHH-HHhhhCCCceeeCCc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLGC-LCVYG-AVCKHLNLPFVFGGT 237 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~g~ 237 (303)
+++..|..+ |+.+|...|. .. + ++++++|++++||++.... +... +..+. .+.++.. +....|.
T Consensus 176 ~~~~~~~~~---Y~~sK~~~E~~~~~~~~~~~-~~~~~~r~~~~~gp~~~~~--~~~~~~~~~~~~~~~g~~-~~~~~g~ 248 (381)
T 1n7h_A 176 TTPFHPRSP---YAASKCAAHWYTVNYREAYG-LFACNGILFNHESPRRGEN--FVTRKITRALGRIKVGLQ-TKLFLGN 248 (381)
T ss_dssp TSCCCCCSH---HHHHHHHHHHHHHHHHHHHC-CEEEEEEECCEECTTSCTT--SHHHHHHHHHHHHHHTSC-CCEEESC
T ss_pred CCCCCCCCc---hHHHHHHHHHHHHHHHHHhC-CcEEEEEeCceeCCCCCCc--chhHHHHHHHHHHHcCCC-CeEEeCC
Confidence 877666666 8888887762 22 4 8889999999999754321 1111 11111 1222211 2222233
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
. ....++++++|+|++++.++..+. +++||+++++.+|+.|+++.+++.+|.+.
T Consensus 249 ~----~~~~~~v~v~Dva~a~~~~~~~~~-----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 302 (381)
T 1n7h_A 249 L----QASRDWGFAGDYVEAMWLMLQQEK-----PDDYVVATEEGHTVEEFLDVSFGYLGLNW 302 (381)
T ss_dssp T----TCEEECEEHHHHHHHHHHHHTSSS-----CCEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred C----CceeeeEEHHHHHHHHHHHHhCCC-----CCeEEeeCCCCCcHHHHHHHHHHHcCCCc
Confidence 2 455678999999999999987653 26899999999999999999999999753
No 37
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=99.96 E-value=3.7e-28 Score=212.48 Aligned_cols=250 Identities=15% Similarity=0.069 Sum_probs=177.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---c----cCCCeEEEEecCCCHHHHHHHHhcc--Ccee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---I----QSSSYCFISCDLLNPLDIKRKLTLL--EDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~----~~~~~~~~~~D~~~~~~l~~~~~~~--~~V~ 97 (303)
++|+|||||||||||++++++|+ +.|++|++++|++.... . ...+++++.+|+.|.+++.++++++ |.|+
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 80 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLL-EKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY 80 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 35799999999999999999999 57999999999875421 0 1236889999999999999999875 7799
Q ss_pred EEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccc
Q 042242 98 HIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNF 177 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~ 177 (303)
|+|+......+..+..+.+++|+.++.+++++|.+... ..+++++|+..+|+... ..++.|+.+..|..+
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~vyg~~~-------~~~~~e~~~~~~~~~-- 150 (345)
T 2z1m_A 81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKP-DTKFYQASTSEMFGKVQ-------EIPQTEKTPFYPRSP-- 150 (345)
T ss_dssp ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TCEEEEEEEGGGGCSCS-------SSSBCTTSCCCCCSH--
T ss_pred ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCC-------CCCCCccCCCCCCCh--
Confidence 99876433222233445889999999999999997631 24666666666775542 346778777665666
Q ss_pred hHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCccchhhHHHHHH-HHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 178 YYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYG-AVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 178 ~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
|+.+|...|. .. + ++++++|++++||++.... .+...+.... .+..+ ..+....+.. ....+++
T Consensus 151 -Y~~sK~~~e~~~~~~~~~~~-~~~~~~r~~~~~gpg~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~ 222 (345)
T 2z1m_A 151 -YAVAKLFGHWITVNYREAYN-MFACSGILFNHESPLRGIE-FVTRKITYSLARIKYG-LQDKLVLGNL----NAKRDWG 222 (345)
T ss_dssp -HHHHHHHHHHHHHHHHHHHC-CCEEEEEECCEECTTSCTT-SHHHHHHHHHHHHHTT-SCSCEEESCT----TCEECCE
T ss_pred -hHHHHHHHHHHHHHHHHHhC-CceEeeeeeeecCCCCCCc-chhHHHHHHHHHHHcC-CCCeeeeCCC----CceeeeE
Confidence 8888877762 22 3 8889999999999754321 1111111111 12221 1122222322 3455788
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
+++|+|++++.++..+.. ++||+++++.+|+.|+++.+++.+|++.
T Consensus 223 ~v~Dva~a~~~~~~~~~~-----~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 268 (345)
T 2z1m_A 223 YAPEYVEAMWLMMQQPEP-----DDYVIATGETHTVREFVEKAAKIAGFDI 268 (345)
T ss_dssp EHHHHHHHHHHHHTSSSC-----CCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred EHHHHHHHHHHHHhCCCC-----ceEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence 999999999999876531 6899999999999999999999999863
No 38
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=99.96 E-value=1.3e-28 Score=216.73 Aligned_cols=244 Identities=12% Similarity=0.026 Sum_probs=173.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhc-----cCceeEEe
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTL-----LEDVTHIF 100 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~-----~~~V~~~~ 100 (303)
+|+|||||||||||++|+++|+ +.| ++|++++|.+.... ....++. +.+|+.|.+.+..++++ +|.|+|++
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A 123 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALN-DKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEG 123 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHH-HTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEECC
Confidence 4789999999999999999999 578 89999999865421 1122344 67899999999999874 78899997
Q ss_pred ecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHH
Q 042242 101 WVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYV 180 (303)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~ 180 (303)
+.... ...+..+.+++|+.++.+++++|.+... +++++|+..+|+.. ...+++|+++..|..+ |+
T Consensus 124 ~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~---r~V~~SS~~v~g~~-------~~~~~~E~~~~~p~~~---Y~ 188 (357)
T 2x6t_A 124 ACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGR-------TSDFIESREYEKPLNV---FG 188 (357)
T ss_dssp SCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC---CEEEEEEGGGGCSC-------SSCCCSSGGGCCCSSH---HH
T ss_pred cccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEcchHHhCCC-------CCCCcCCcCCCCCCCh---hH
Confidence 75433 2222344899999999999999998632 55555555577543 1346788877666666 88
Q ss_pred HHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhh-cccCccHH
Q 042242 181 LEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEY-CLDGSDSR 252 (303)
Q Consensus 181 ~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~ 252 (303)
.+|...|. .... ++++++||+.|||++..........+..+.. +.. +.++...+.. .. ..++++++
T Consensus 189 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~i~v~ 262 (357)
T 2x6t_A 189 YSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNN--GESPKLFEGS----ENFKRDFVYVG 262 (357)
T ss_dssp HHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHT--TCCCEEETTG----GGCEECEEEHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHc--CCCcEEeCCC----CcceEccEEHH
Confidence 88877762 2322 8999999999999754321111011111111 222 3343333432 45 66789999
Q ss_pred HHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 253 LVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 253 d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
|+|++++.++..+. + ++||+++++.+|+.|+++.+++.+|.+
T Consensus 263 Dva~ai~~~~~~~~--~---~~~~i~~~~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 263 DVADVNLWFLENGV--S---GIFNLGTGRAESFQAVADATLAYHKKG 304 (357)
T ss_dssp HHHHHHHHHHHHCC--C---EEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCC--C---CeEEecCCCcccHHHHHHHHHHHcCCC
Confidence 99999999987764 3 799999999999999999999999986
No 39
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=99.96 E-value=3.1e-28 Score=217.21 Aligned_cols=265 Identities=15% Similarity=0.107 Sum_probs=178.8
Q ss_pred CEEEEEcCCChhHHHHHHHHh-hcCCCeEEEEecCCccc---------c-cc-----------CCC---eEEEEecCCCH
Q 042242 29 NVAVIFGVTGLVGKELARRLI-STANWKVYGIARKPEIT---------A-IQ-----------SSS---YCFISCDLLNP 83 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~-~~~g~~V~~~~r~~~~~---------~-~~-----------~~~---~~~~~~D~~~~ 83 (303)
|+|||||||||||++|+++|+ + .|++|++++|..... . .. ..+ ++++.+|+.|.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRD-TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHh-CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 589999999999999999998 5 689999999975431 1 10 124 88999999999
Q ss_pred HHHHHHHh--c-cCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccc
Q 042242 84 LDIKRKLT--L-LEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 84 ~~l~~~~~--~-~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
+++.++++ + +|.|||+|+......+..+..+.+++|+.++.+++++|++.. ..+++++|+..+|+..........
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~--~~~iv~~SS~~v~g~~~~~~~~~~ 159 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK--CDKIIFSSSAAIFGNPTMGSVSTN 159 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGTBSCCC-----C
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC--CCEEEEECCHHHhCCCCccccccc
Confidence 99999998 5 788999987543322233445589999999999999998763 345566666557754320000001
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCC--------ccchhhHHHHH--HH
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRS--------LYNFLGCLCVY--GA 223 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~--~~ 223 (303)
..+++|+++..|..+ |+.+|...|. .. + ++++++||+.|||++... ...++..+... ..
T Consensus 160 ~~~~~E~~~~~p~~~---Y~~sK~~~e~~~~~~~~~~g-i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 235 (397)
T 1gy8_A 160 AEPIDINAKKSPESP---YGESKLIAERMIRDCAEAYG-IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD 235 (397)
T ss_dssp CCCBCTTSCCBCSSH---HHHHHHHHHHHHHHHHHHHC-CEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHH
T ss_pred ccCcCccCCCCCCCc---hHHHHHHHHHHHHHHHHHHC-CcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHH
Confidence 356788887665566 8888877762 21 4 899999999999975321 11122211100 01
Q ss_pred HhhhCC----------CceeeCCch---hhhhhhcccCccHHHHHHHHHHHhcCcCCcCC--CC---ceEEeecCCCccH
Q 042242 224 VCKHLN----------LPFVFGGTR---EIWEEYCLDGSDSRLVAEQHIWVATNDDISST--KG---QAFNAINGPRFTW 285 (303)
Q Consensus 224 ~~~~~~----------~~~~~~g~~---~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~--~g---~~yni~~~~~~s~ 285 (303)
+..+.. .++.+.|.. ... ....++++++|+|++++.++..+...+. .+ ++||+++++.+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g-~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~ 314 (397)
T 1gy8_A 236 IAPDQRLTIHEDASTDKRMPIFGTDYPTPDG-TCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV 314 (397)
T ss_dssp HSCC-----------CCCEEEECSCSSSTTS-SCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred HHhcCccccccccccCCCceeecCcccCCCC-CeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccH
Confidence 112111 234443310 001 5667899999999999988865432100 12 6899999999999
Q ss_pred HhhHHHHHHHhcccCC
Q 042242 286 KEIWPSIGKKFGVKVP 301 (303)
Q Consensus 286 ~e~~~~i~~~~g~~~~ 301 (303)
.|+++.+++.+|.+.+
T Consensus 315 ~e~~~~i~~~~g~~~~ 330 (397)
T 1gy8_A 315 REVIEVARKTTGHPIP 330 (397)
T ss_dssp HHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHhCCCCC
Confidence 9999999999998754
No 40
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=99.96 E-value=8.7e-29 Score=211.76 Aligned_cols=226 Identities=15% Similarity=0.084 Sum_probs=170.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh--ccCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~~~~ 104 (303)
..++|||||||||||++|+++|+ ..|++|++++|+. +|+.|.+++.++++ ++|.|+|+++...
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~--------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 75 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLK-GKNVEVIPTDVQD--------------LDITNVLAVNKFFNEKKPNVVINCAAHTA 75 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHT-TSSEEEEEECTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred ccceEEEECCCChHHHHHHHHHH-hCCCeEEeccCcc--------------CCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence 45799999999999999999999 6899999999972 79999999999998 6788999987543
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
......++.+.+++|+.++.+++++|++.+ . +++++|+..+|+.. ...+++|+++..|.++ |+.+|.
T Consensus 76 ~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~--~-~iv~~SS~~v~~~~-------~~~~~~E~~~~~~~~~---Y~~sK~ 142 (292)
T 1vl0_A 76 VDKCEEQYDLAYKINAIGPKNLAAAAYSVG--A-EIVQISTDYVFDGE-------AKEPITEFDEVNPQSA---YGKTKL 142 (292)
T ss_dssp HHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--C-EEEEEEEGGGSCSC-------CSSCBCTTSCCCCCSH---HHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEechHHeECCC-------CCCCCCCCCCCCCccH---HHHHHH
Confidence 322233445689999999999999999864 2 56666666677543 1346788887766666 999988
Q ss_pred HHHHh---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 185 LKEKL---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 185 ~~e~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
..|.. .. .+++++||+.+||+ .. ++...+ ...+.. +.++...+ ....++++++|+|++++.+
T Consensus 143 ~~E~~~~~~~-~~~~~lR~~~v~G~-~~---~~~~~~--~~~~~~--~~~~~~~~------~~~~~~i~v~Dva~~~~~~ 207 (292)
T 1vl0_A 143 EGENFVKALN-PKYYIVRTAWLYGD-GN---NFVKTM--INLGKT--HDELKVVH------DQVGTPTSTVDLARVVLKV 207 (292)
T ss_dssp HHHHHHHHHC-SSEEEEEECSEESS-SS---CHHHHH--HHHHHH--CSEEEEES------SCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHhhC-CCeEEEeeeeeeCC-Cc---ChHHHH--HHHHhc--CCcEEeec------CeeeCCccHHHHHHHHHHH
Confidence 88843 13 67999999999996 21 121111 111222 44544445 3445788999999999998
Q ss_pred hcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 262 ATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 262 ~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
+..+ .+ ++||+++++.+|+.|+++.+++.+|++.
T Consensus 208 ~~~~--~~---~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 241 (292)
T 1vl0_A 208 IDEK--NY---GTFHCTCKGICSWYDFAVEIFRLTGIDV 241 (292)
T ss_dssp HHHT--CC---EEEECCCBSCEEHHHHHHHHHHHHCCCC
T ss_pred HhcC--CC---cEEEecCCCCccHHHHHHHHHHHhCCCC
Confidence 8765 33 7999999999999999999999999764
No 41
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=99.96 E-value=1.3e-28 Score=213.46 Aligned_cols=244 Identities=16% Similarity=0.074 Sum_probs=172.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh--ccCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~~~~ 104 (303)
++|+|||||||||||++|+++|+ ..|++|++++|+. .+|+.|.+++.++++ ++|.|+|+++...
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~-~~g~~v~~~~r~~-------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 67 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLE-QRGDVELVLRTRD-------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG 67 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHT-TCTTEEEECCCTT-------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-hCCCeEEEEecCc-------------cCCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence 45799999999999999999999 6899999988763 279999999999998 7888999976532
Q ss_pred c-cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC-CCCc-cchHHH
Q 042242 105 A-SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV-SKSN-NFYYVL 181 (303)
Q Consensus 105 ~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~-p~~~-~~~y~~ 181 (303)
. .....++.+.+++|+.++.+++++|++.. ..+++++|+..+|+... ..+++|+++.. +..| ...|+.
T Consensus 68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~vyg~~~-------~~~~~E~~~~~~~~~p~~~~Y~~ 138 (321)
T 1e6u_A 68 GIVANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIYPKLA-------KQPMAESELLQGTLEPTNEPYAI 138 (321)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGSCTTC-------CSSBCGGGTTSSCCCGGGHHHHH
T ss_pred CcchhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEccHHHcCCCC-------CCCcCccccccCCCCCCCCccHH
Confidence 1 11223344588999999999999998763 45777777777775432 34677776321 1223 224888
Q ss_pred HHHHHHH-----h--cCCcceEEecCCceeecCCCCc---cchhhHHHHHHHHhhh--CC-CceeeCCchhhhhhhcccC
Q 042242 182 EDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSL---YNFLGCLCVYGAVCKH--LN-LPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 182 ~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~--~~-~~~~~~g~~~~~~~~~~~~ 248 (303)
+|...|. . .+ ++++++||+.+||++.... ..++..+... +... .+ .++.+.+.. ....++
T Consensus 139 sK~~~E~~~~~~~~~~~-~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g----~~~~~~ 211 (321)
T 1e6u_A 139 AKIAGIKLCESYNRQYG-RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRR--FHEATAQKAPDVVVWGSG----TPMREF 211 (321)
T ss_dssp HHHHHHHHHHHHHHHHC-CEEEEEEECEEESTTCCCCTTCSSHHHHHHHH--HHHHHHHTCSEEEEESCS----CCEECE
T ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEeCCcCCcCCCCCCCCCccHHHHHHH--HHHhhhcCCCceEEcCCC----CEEEEe
Confidence 8777762 2 24 9999999999999754321 1222222111 1111 12 344444432 556788
Q ss_pred ccHHHHHHHHHHHhcCcCCc-----CCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 249 SDSRLVAEQHIWVATNDDIS-----STKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~-----~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
++++|+|++++.++..+... ...+++||+++++.+|+.|+++.+++.+|.+.
T Consensus 212 i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 268 (321)
T 1e6u_A 212 LHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG 268 (321)
T ss_dssp EEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS
T ss_pred EEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 99999999999998776431 00137999999999999999999999999865
No 42
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=99.96 E-value=5.3e-29 Score=213.78 Aligned_cols=232 Identities=13% Similarity=0.060 Sum_probs=172.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCceeEEeeccccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTHIFWVTWAS 106 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~~~~~~~ 106 (303)
|+|||||||||||++++++|+ . |++|++++|++. ++.+|+.|.+++.+++++ +|.|+|+++.....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r~~~----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 68 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P-VGNLIALDVHSK----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T-TSEEEEECTTCS----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-c-CCeEEEeccccc----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence 479999999999999999998 4 899999999862 346899999999999987 78899998754322
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
....++.+.++.|+.++.+++++|++.+. +++++|+..+|+.. ...++.|+++..|.++ |+.+|...
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~~v~~SS~~vy~~~-------~~~~~~E~~~~~p~~~---Y~~sK~~~ 135 (299)
T 1n2s_A 69 KAESEPELAQLLNATSVEAIAKAANETGA---WVVHYSTDYVFPGT-------GDIPWQETDATSPLNV---YGKTKLAG 135 (299)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC---EEEEEEEGGGSCCC-------TTCCBCTTSCCCCSSH---HHHHHHHH
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC---cEEEEecccEEeCC-------CCCCCCCCCCCCCccH---HHHHHHHH
Confidence 22233445889999999999999987643 46666666677544 2346788887766666 99998888
Q ss_pred HHh---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhc
Q 042242 187 EKL---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVAT 263 (303)
Q Consensus 187 e~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~ 263 (303)
|.. .. .+++++||+.+||++.. ++...+. ..+.. +.++...| ....++++++|+|++++.++.
T Consensus 136 E~~~~~~~-~~~~ilRp~~v~G~~~~---~~~~~~~--~~~~~--~~~~~~~~------~~~~~~i~v~Dva~~~~~~~~ 201 (299)
T 1n2s_A 136 EKALQDNC-PKHLIFRTSWVYAGKGN---NFAKTML--RLAKE--RQTLSVIN------DQYGAPTGAELLADCTAHAIR 201 (299)
T ss_dssp HHHHHHHC-SSEEEEEECSEECSSSC---CHHHHHH--HHHHH--CSEEEEEC------SCEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCeEEEeeeeecCCCcC---cHHHHHH--HHHhc--CCCEEeec------CcccCCeeHHHHHHHHHHHHH
Confidence 742 13 58999999999996543 2211111 11222 44555555 345678899999999999887
Q ss_pred CcC-CcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 264 NDD-ISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 264 ~~~-~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
.+. .. ..+++||+++++.+|+.|+++.+++.+|.+.
T Consensus 202 ~~~~~~-~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 238 (299)
T 1n2s_A 202 VALNKP-EVAGLYHLVAGGTTTWHDYAALVFDEARKAG 238 (299)
T ss_dssp HHHHCG-GGCEEEECCCBSCEEHHHHHHHHHHHHHHHT
T ss_pred Hhcccc-ccCceEEEeCCCCCCHHHHHHHHHHHhCCCc
Confidence 652 11 0137999999999999999999999998763
No 43
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=99.96 E-value=3e-29 Score=217.27 Aligned_cols=237 Identities=15% Similarity=0.088 Sum_probs=167.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc---cc------ccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI---TA------IQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~---~~------~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
.|+++|||||||||||++|+++|+ +.|++|++++|++.. .. ....+++++.+|+. ++|.|
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~v 73 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALV-ASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLV 73 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHH-HTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHH-HCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEE
Confidence 356899999999999999999999 679999999998762 11 11234555555654 67789
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCcc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNN 176 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~ 176 (303)
+|+++..........+.+.++ |+.++.+++++|++.+ +.+++++|+..+|+.. ...+++|+++..|.++
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~--v~~~v~~SS~~v~~~~-------~~~~~~E~~~~~p~~~- 142 (321)
T 3vps_A 74 YHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG--VPKVVVGSTCEVYGQA-------DTLPTPEDSPLSPRSP- 142 (321)
T ss_dssp EECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSC-------SSSSBCTTSCCCCCSH-
T ss_pred EECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC--CCeEEEecCHHHhCCC-------CCCCCCCCCCCCCCCh-
Confidence 999775433222222223567 9999999999999874 4566666666677554 2457888888776666
Q ss_pred chHHHHHHHHH-----HhcCC-c-ceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 177 FYYVLEDLLKE-----KLAGK-V-AWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 177 ~~y~~~k~~~e-----~~~~~-~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
|+.+|...| +.... + +++++||+.+||++... ..+...+. ..+.. +.++...+.. ....+++
T Consensus 143 --Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~--~~~~~--~~~~~~~~~~----~~~~~~v 211 (321)
T 3vps_A 143 --YAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP-DALVPRLC--ANLLT--RNELPVEGDG----EQRRDFT 211 (321)
T ss_dssp --HHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-TSHHHHHH--HHHHH--HSEEEEETTS----CCEECEE
T ss_pred --hHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-CChHHHHH--HHHHc--CCCeEEeCCC----CceEceE
Confidence 888887766 22323 7 99999999999975432 11111211 11222 3344444433 4667889
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+++|+|++++.++..+.. | +||+++++.+|+.|+++.++ .+|.+.+
T Consensus 212 ~v~Dva~~~~~~~~~~~~----g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~ 257 (321)
T 3vps_A 212 YITDVVDKLVALANRPLP----S-VVNFGSGQSLSVNDVIRILQ-ATSPAAE 257 (321)
T ss_dssp EHHHHHHHHHHGGGSCCC----S-EEEESCSCCEEHHHHHHHHH-TTCTTCE
T ss_pred EHHHHHHHHHHHHhcCCC----C-eEEecCCCcccHHHHHHHHH-HhCCCCc
Confidence 999999999999887642 4 99999999999999999999 9998754
No 44
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=1.7e-28 Score=202.26 Aligned_cols=218 Identities=12% Similarity=0.112 Sum_probs=157.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
+++|||||||||||++|+++|+ +.|++|++++|++.+......+++++.+|+.|.+++.++++++|.|+|+++.....
T Consensus 4 m~~ilItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~- 81 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEAL-NRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN- 81 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHH-TTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC-
Confidence 3699999999999999999999 68999999999987654334789999999999999999999999999997643211
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
.+.++.|+.++.++++++++.. ..+++++|+...|.... ....++.+..|..+ |+.+|...|
T Consensus 82 -----~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~--------~~~~~~~~~~p~~~---Y~~sK~~~e 143 (227)
T 3dhn_A 82 -----PDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSLFIAP--------GLRLMDSGEVPENI---LPGVKALGE 143 (227)
T ss_dssp -------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTSEEET--------TEEGGGTTCSCGGG---HHHHHHHHH
T ss_pred -----hhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhccCCC--------CCccccCCcchHHH---HHHHHHHHH
Confidence 1267889999999999999863 44666666554443321 12334445444455 998888877
Q ss_pred -----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 188 -----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 188 -----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
+.... ++++++||+.+||++..... + . .....+ ...+. . .++++++|+|++++.+
T Consensus 144 ~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~-~-~---------~~~~~~-~~~~~------~-~~~i~~~Dva~ai~~~ 204 (227)
T 3dhn_A 144 FYLNFLMKEKEIDWVFFSPAADMRPGVRTGR-Y-R---------LGKDDM-IVDIV------G-NSHISVEDYAAAMIDE 204 (227)
T ss_dssp HHHHTGGGCCSSEEEEEECCSEEESCCCCCC-C-E---------EESSBC-CCCTT------S-CCEEEHHHHHHHHHHH
T ss_pred HHHHHHhhccCccEEEEeCCcccCCCccccc-e-e---------ecCCCc-ccCCC------C-CcEEeHHHHHHHHHHH
Confidence 12233 99999999999997543221 0 0 001112 22221 1 4689999999999999
Q ss_pred hcCcCCcCCCCceEEeecCCCccHHh
Q 042242 262 ATNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 262 ~~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
+.++...+ ++|+++++++.+|.+
T Consensus 205 l~~~~~~g---~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 205 LEHPKHHQ---ERFTIGYLEHHHHHH 227 (227)
T ss_dssp HHSCCCCS---EEEEEECCSCCC---
T ss_pred HhCccccC---cEEEEEeehhcccCC
Confidence 99988665 999999999988863
No 45
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=99.96 E-value=1.3e-27 Score=208.29 Aligned_cols=240 Identities=13% Similarity=0.087 Sum_probs=172.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--cc-CCCeEEEEecCCCHHHHHHHHhc--cCceeEEee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQ-SSSYCFISCDLLNPLDIKRKLTL--LEDVTHIFW 101 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~-~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~~ 101 (303)
++++|||||||||||++|+++|+ +.|++|++++|++.... .. ..+++++.+|+.|.+++.+++++ +|.|+|+++
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLL-ERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-HCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence 45799999999999999999999 67999999999764321 11 15788999999999999999998 888999987
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC-CccchHH
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK-SNNFYYV 180 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~-~~~~~y~ 180 (303)
..... +..++ + +++|+.++.+++++|.+.. ..+++++|+..+|+.... .... +++|++ .|. .+ |+
T Consensus 99 ~~~~~-~~~~~-~-~~~N~~~~~~l~~a~~~~~--~~~iV~~SS~~~~g~~~~---~~~~-~~~E~~--~p~~~~---Y~ 164 (333)
T 2q1w_A 99 SYKDP-DDWYN-D-TLTNCVGGSNVVQAAKKNN--VGRFVYFQTALCYGVKPI---QQPV-RLDHPR--NPANSS---YA 164 (333)
T ss_dssp CCSCT-TCHHH-H-HHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGCSCCC---SSSB-CTTSCC--CCTTCH---HH
T ss_pred ecCCC-ccCCh-H-HHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHhCCCcc---cCCC-CcCCCC--CCCCCc---hH
Confidence 64332 22333 2 8999999999999998763 445666666557751100 0012 567766 334 55 99
Q ss_pred HHHHHHHHhcCC--cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHH
Q 042242 181 LEDLLKEKLAGK--VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQH 258 (303)
Q Consensus 181 ~~k~~~e~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~ 258 (303)
.+|...|..-.. .+++++||+++||++.. ..+...+ ...+.. +.++. .+ ....++++++|+|+++
T Consensus 165 ~sK~~~E~~~~~s~~~~~ilR~~~v~gp~~~--~~~~~~~--~~~~~~--~~~~~-~~------~~~~~~i~v~Dva~ai 231 (333)
T 2q1w_A 165 ISKSANEDYLEYSGLDFVTFRLANVVGPRNV--SGPLPIF--FQRLSE--GKKCF-VT------KARRDFVFVKDLARAT 231 (333)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESEEESTTCC--SSHHHHH--HHHHHT--TCCCE-EE------ECEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCCeEEEeeceEECcCCc--CcHHHHH--HHHHHc--CCeee-CC------CceEeeEEHHHHHHHH
Confidence 998888743211 27899999999997621 1122221 111222 22222 12 4556789999999999
Q ss_pred HHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 259 IWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 259 ~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
+.++..+. + ++||+++++.+|+.|+++.+++.+|.+
T Consensus 232 ~~~~~~~~--g---~~~~v~~~~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 232 VRAVDGVG--H---GAYHFSSGTDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HHHHTTCC--C---EEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred HHHHhcCC--C---CEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 99987764 3 899999999999999999999999986
No 46
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=99.96 E-value=9.5e-29 Score=213.15 Aligned_cols=242 Identities=12% Similarity=0.024 Sum_probs=161.5
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCccccc-cCCCeEEEEecCCCHHHHHHHHhc-----cCceeEEeec
Q 042242 30 VAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITAI-QSSSYCFISCDLLNPLDIKRKLTL-----LEDVTHIFWV 102 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~l~~~~~~-----~~~V~~~~~~ 102 (303)
+|||||||||||++|+++|+ +.| ++|++++|.+..... ...++. +.+|+.|.+.+..++++ +|.|+|+++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 78 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALN-DKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHH-TTTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CEEEEcCccHHHHHHHHHHH-HCCCcEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence 58999999999999999999 678 899999998754311 112333 67899999999999985 7889999775
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHH
Q 042242 103 TWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLE 182 (303)
Q Consensus 103 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~ 182 (303)
... ...++.+.+++|+.++.+++++|++.+. +++++|+..+|+... ..+++|+++..|.++ |+.+
T Consensus 79 ~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~~v~~SS~~v~g~~~-------~~~~~E~~~~~p~~~---Y~~s 143 (310)
T 1eq2_A 79 SST--TEWDGKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGRT-------SDFIESREYEKPLNV---YGYS 143 (310)
T ss_dssp CCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC---CEEEEEEGGGGTTCC-------SCBCSSGGGCCCSSH---HHHH
T ss_pred ccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEeeHHHhCCCC-------CCCCCCCCCCCCCCh---hHHH
Confidence 433 2223344899999999999999998632 555555555775431 336778877666666 8888
Q ss_pred HHHHH-----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhh-cccCccHHHH
Q 042242 183 DLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEY-CLDGSDSRLV 254 (303)
Q Consensus 183 k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~ 254 (303)
|...| +.... ++++++||+.+||++..........+..+.. +.+ +.++...+.. .. ..++++++|+
T Consensus 144 K~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g----~~~~~~~i~v~Dv 217 (310)
T 1eq2_A 144 KFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNN--GESPKLFEGS----ENFKRDFVYVGDV 217 (310)
T ss_dssp HHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------------CBCEEEHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHc--CCCcEEecCC----CcceEccEEHHHH
Confidence 77776 22322 8999999999999754311111011111111 222 3343333332 45 6789999999
Q ss_pred HHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 255 AEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 255 a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
|++++.++..+. + ++||+++++.+|+.|+++.+++.+|.+
T Consensus 218 a~~~~~~~~~~~--~---~~~~i~~~~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 218 ADVNLWFLENGV--S---GIFNLGTGRAESFQAVADATLAYHKKG 257 (310)
T ss_dssp HHHHHHHHHHCC--C---EEEEESCSCCBCHHHHHHHC-------
T ss_pred HHHHHHHHhcCC--C---CeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence 999999987764 3 799999999999999999999999976
No 47
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=99.96 E-value=5e-28 Score=216.29 Aligned_cols=253 Identities=17% Similarity=0.107 Sum_probs=172.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------------------------ccCCCeEEEEecCCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------------------------IQSSSYCFISCDLLN 82 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------------------------~~~~~~~~~~~D~~~ 82 (303)
.+++|||||||||||++|+++|+ +.|++|++++|...... ....+++++.+|+.|
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLS-KKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred CCCeEEEeCCCcHHHHHHHHHHH-hCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 35799999999999999999999 68999999988532210 013578899999999
Q ss_pred HHHHHHHHhc--cCceeEEeecccccC---ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCc
Q 042242 83 PLDIKRKLTL--LEDVTHIFWVTWASQ---FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPE 157 (303)
Q Consensus 83 ~~~l~~~~~~--~~~V~~~~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g 157 (303)
.+++.+++++ +|.|+|+|+...... ......+.+++|+.++.+++++|++... ..+++++|+..+|+...
T Consensus 89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~---- 163 (404)
T 1i24_A 89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTMGEYGTPN---- 163 (404)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCGGGGCCCS----
T ss_pred HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC-CcEEEEeCcHHHhCCCC----
Confidence 9999999998 888999987543211 1222234789999999999999987632 13667777666775432
Q ss_pred ccccCCcCcC--------------CCCCCCCccchHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCc-----
Q 042242 158 EKQVRFYDEE--------------CPRVSKSNNFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSL----- 211 (303)
Q Consensus 158 ~~~~~~~~e~--------------~~~~p~~~~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~----- 211 (303)
.++.|+ .+..|.++ |+.+|...|. .. + ++++++||+.|||++....
T Consensus 164 ----~~~~E~~~~~~~~~~~~~~~~~~~~~~~---Y~~sK~~~e~~~~~~~~~~g-i~~~ivrp~~v~Gp~~~~~~~~~~ 235 (404)
T 1i24_A 164 ----IDIEEGYITITHNGRTDTLPYPKQASSF---YHLSKVHDSHNIAFTCKAWG-IRATDLNQGVVYGVKTDETEMHEE 235 (404)
T ss_dssp ----SCBCSSEEEEEETTEEEEEECCCCCCSH---HHHHHHHHHHHHHHHHHHHC-CEEEEEEECEEECSCCTTGGGSGG
T ss_pred ----CCCCccccccccccccccccCCCCCCCh---hHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeCCCCCccccccc
Confidence 233443 23333444 8888887662 12 4 9999999999999754210
Q ss_pred ----c--c-h-hhHHHHHHH-HhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 212 ----Y--N-F-LGCLCVYGA-VCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 212 ----~--~-~-~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
. . . ...+..+.. +.. +.++.+.|.. .+..++++++|+|++++.++..+...+ ..++||+++ +.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~g~g----~~~~~~i~v~Dva~a~~~~l~~~~~~g-~~~~yni~~-~~ 307 (404)
T 1i24_A 236 LRNRLDYDAVFGTALNRFCVQAAV--GHPLTVYGKG----GQTRGYLDIRDTVQCVEIAIANPAKAG-EFRVFNQFT-EQ 307 (404)
T ss_dssp GCCCCCCSTTTCCHHHHHHHHHHH--TCCEEEETTS----CCEEEEEEHHHHHHHHHHHHHSCCCTT-CEEEEEECS-EE
T ss_pred cccccccccchhhHHHHHHHHHHc--CCeeEEeCCC----CceECcEEHHHHHHHHHHHHhCcccCC-CceEEEECC-CC
Confidence 0 0 0 011111111 222 4454444432 455678999999999999987764321 015999998 88
Q ss_pred ccHHhhHHHHHHH---hcccCC
Q 042242 283 FTWKEIWPSIGKK---FGVKVP 301 (303)
Q Consensus 283 ~s~~e~~~~i~~~---~g~~~~ 301 (303)
+|+.|+++.+++. +|.+.+
T Consensus 308 ~s~~e~~~~i~~~~~~~g~~~~ 329 (404)
T 1i24_A 308 FSVNELASLVTKAGSKLGLDVK 329 (404)
T ss_dssp EEHHHHHHHHHHHHHTTTCCCC
T ss_pred CcHHHHHHHHHHHHHhhCCCcc
Confidence 9999999999998 777653
No 48
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=99.96 E-value=1.2e-27 Score=211.45 Aligned_cols=248 Identities=16% Similarity=0.141 Sum_probs=174.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc---ccc---------CCCeEEEEecCCCHHHHHHHHhc--cC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT---AIQ---------SSSYCFISCDLLNPLDIKRKLTL--LE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~~~---------~~~~~~~~~D~~~~~~l~~~~~~--~~ 94 (303)
|+|||||||||||++++++|+ ..|++|++++|++... ... ..+++++.+|++|.+++.+++++ +|
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLL-EKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 689999999999999999999 5799999999976531 110 24688899999999999999987 47
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC-CccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK-ALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
.|+|+++.........++.+.+++|+.++.++++++.+... +-.+++++|+..+|+... ..+++|+++..|.
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~-------~~~~~E~~~~~~~ 153 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQ-------EIPQKETTPFYPR 153 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCC-------SSSBCTTSCCCCC
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCC-------CCCCCccCCCCCC
Confidence 79999876443333334445789999999999999987631 114566666666775431 3467888776666
Q ss_pred CccchHHHHHHHHHH-----hc--CCcceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCC-ceeeCCchhhhhhh
Q 042242 174 SNNFYYVLEDLLKEK-----LA--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNL-PFVFGGTREIWEEY 244 (303)
Q Consensus 174 ~~~~~y~~~k~~~e~-----~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~~~~~~~~ 244 (303)
++ |+.+|...|. .. + ++++++|++.+||++..... ....+..+.. +.+ +. +....|.. .+
T Consensus 154 ~~---Y~~sK~~~e~~~~~~~~~~~-~~~~~~r~~~~~gp~~~~~~-~~~~~~~~~~~~~~--g~~~~~~~g~~----~~ 222 (372)
T 1db3_A 154 SP---YAVAKLYAYWITVNYRESYG-MYACNGILFNHESPRRGETF-VTRKITRAIANIAQ--GLESCLYLGNM----DS 222 (372)
T ss_dssp SH---HHHHHHHHHHHHHHHHHHHC-CCEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHT--TSCCCEEESCT----TC
T ss_pred Ch---HHHHHHHHHHHHHHHHHHhC-CCeEEEEECCccCCCCCCcc-hhhHHHHHHHHHHc--CCCCceeecCC----Cc
Confidence 66 8888877762 22 4 89999999999997543211 0011111111 222 32 22233332 45
Q ss_pred cccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 245 CLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 245 ~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
..++++++|+|++++.++..+. +++||+++++.+|+.|+++.+++.+|.+.
T Consensus 223 ~~~~i~v~Dva~a~~~~~~~~~-----~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 273 (372)
T 1db3_A 223 LRDWGHAKDYVKMQWMMLQQEQ-----PEDFVIATGVQYSVRQFVEMAAAQLGIKL 273 (372)
T ss_dssp EECCEEHHHHHHHHHHTTSSSS-----CCCEEECCCCCEEHHHHHHHHHHTTTEEE
T ss_pred eeeeeEHHHHHHHHHHHHhcCC-----CceEEEcCCCceeHHHHHHHHHHHhCCCc
Confidence 6789999999999999887653 26899999999999999999999998753
No 49
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=99.96 E-value=1.5e-27 Score=208.25 Aligned_cols=258 Identities=14% Similarity=0.074 Sum_probs=173.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--c------cCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--I------QSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~------~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
++|||||||||||++++++|+ +.|++|++++|...... . ...+++++.+|++|.+++.+++++ +|.|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih 79 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLL-QNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence 379999999999999999999 68999999987533211 0 124678899999999999999975 678999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC-CCccc
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS-KSNNF 177 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p-~~~~~ 177 (303)
+|+..........+.+.+++|+.++.++++++++.. ..+++++|+..+|+.. ...+++|+.+..| ..+
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~g~~-------~~~~~~e~~~~~~~~~~-- 148 (338)
T 1udb_A 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGDN-------PKIPYVESFPTGTPQSP-- 148 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSC-------CSSSBCTTSCCCCCSSH--
T ss_pred CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEEccHHHhCCC-------CCCCcCcccCCCCCCCh--
Confidence 987533222223344578999999999999998763 3455555555577543 1345777766543 445
Q ss_pred hHHHHHHHHHH-----h-cC-CcceEEecCCceeecCCCCcc-----chhh-HHHHHHHHhhhCCCceeeCCch---hhh
Q 042242 178 YYVLEDLLKEK-----L-AG-KVAWSVHRPGLLLGSSHRSLY-----NFLG-CLCVYGAVCKHLNLPFVFGGTR---EIW 241 (303)
Q Consensus 178 ~y~~~k~~~e~-----~-~~-~~~~~ilRp~~v~G~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~g~~---~~~ 241 (303)
|+.+|...|. . .. .++++++||+++||+.+...+ .... ..........+.+.++...|.. ...
T Consensus 149 -Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 227 (338)
T 1udb_A 149 -YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG 227 (338)
T ss_dssp -HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred -HHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCC
Confidence 8888877762 1 22 189999999999997431100 0000 1111112222223333332210 001
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
.+..++++++|+|++++.++..+... .++++||+++++.+|+.|+++.+++.+|++.+
T Consensus 228 -~~~~~~i~v~Dva~a~~~~l~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 285 (338)
T 1udb_A 228 -TGVRDYIHVMDLADGHVVAMEKLANK-PGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN 285 (338)
T ss_dssp -SCEECEEEHHHHHHHHHHHHHHHTTC-CEEEEEEESCSCCEEHHHHHHHHHHHHTSCCC
T ss_pred -ceeeeeEEHHHHHHHHHHHHhhhhcc-CCCcEEEecCCCceeHHHHHHHHHHHhCCCCc
Confidence 45678899999999999887653211 11268999999999999999999999998754
No 50
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=99.96 E-value=2.6e-27 Score=207.20 Aligned_cols=245 Identities=15% Similarity=0.096 Sum_probs=167.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
++++|||||||||||++|+++|+ ..|++|++++|...... ....+++++.+|+.+.. +.++|.|+|++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vih~A 99 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLM-MDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQIYHLA 99 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEEECC
T ss_pred CCCEEEEEcCccHHHHHHHHHHH-HCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCEEEECc
Confidence 45799999999999999999999 57999999999754311 11357889999998853 56788899997
Q ss_pred ecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC--CCCCccch
Q 042242 101 WVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR--VSKSNNFY 178 (303)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~--~p~~~~~~ 178 (303)
+.........++.+.+++|+.++.+++++|++.+. +++++|+..+|+... ..+++|+... .|..|...
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~~v~~SS~~v~g~~~-------~~~~~E~~~~~~~~~~~~~~ 169 (343)
T 2b69_A 100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA---RLLLASTSEVYGDPE-------VHPQSEDYWGHVNPIGPRAC 169 (343)
T ss_dssp SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC---EEEEEEEGGGGBSCS-------SSSBCTTCCCBCCSSSTTHH
T ss_pred cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---cEEEECcHHHhCCCC-------CCCCcccccccCCCCCCCCc
Confidence 75432211223345789999999999999988643 455555555775432 2345555311 11223334
Q ss_pred HHHHHHHHHH-----h--cCCcceEEecCCceeecCCCCc-cchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCcc
Q 042242 179 YVLEDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSL-YNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSD 250 (303)
Q Consensus 179 y~~~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (303)
|+.+|...|. . .+ ++++++||+.+||++.... ......+ ...+.+ +.++.+.+.. ....++++
T Consensus 170 Y~~sK~~~E~~~~~~~~~~~-~~~~ilrp~~v~G~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~----~~~~~~v~ 240 (343)
T 2b69_A 170 YDEGKRVAETMCYAYMKQEG-VEVRVARIFNTFGPRMHMNDGRVVSNF--ILQALQ--GEPLTVYGSG----SQTRAFQY 240 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCEEEEEECCEECTTCCTTCCCHHHHH--HHHHHH--TCCEEEESSS----CCEEECEE
T ss_pred hHHHHHHHHHHHHHHHHHhC-CcEEEEEEcceeCcCCCCCcccHHHHH--HHHHHc--CCCceEcCCC----CeEEeeEe
Confidence 8888777662 2 24 9999999999999754321 1111111 111222 3444443432 45567899
Q ss_pred HHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 251 SRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 251 ~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++|+|++++.++..+. +++||+++++.+|+.|+++.+++.+|.+.+
T Consensus 241 v~Dva~a~~~~~~~~~-----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 286 (343)
T 2b69_A 241 VSDLVNGLVALMNSNV-----SSPVNLGNPEEHTILEFAQLIKNLVGSGSE 286 (343)
T ss_dssp HHHHHHHHHHHHTSSC-----CSCEEESCCCEEEHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHhcCC-----CCeEEecCCCCCcHHHHHHHHHHHhCCCCC
Confidence 9999999998886542 268999999999999999999999998653
No 51
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=99.95 E-value=2.6e-27 Score=207.03 Aligned_cols=255 Identities=15% Similarity=0.010 Sum_probs=176.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCC-------CeEEEEecCCccccc-cCCCeEEEEecCCCHHHHHHHHh-ccCce
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTAN-------WKVYGIARKPEITAI-QSSSYCFISCDLLNPLDIKRKLT-LLEDV 96 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~l~~~~~-~~~~V 96 (303)
+++|+||||||+||||++|+++|+ ..| ++|++++|++..... ...+++++.+|+.|.+++.++++ ++|.|
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~-~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~v 90 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLV-KDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVI 90 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHH-HHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHH-hcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEE
Confidence 356799999999999999999999 567 899999998654321 23468889999999999999995 78889
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC---CccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK---ALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
+|+|+.... .+..+..+.+++|+.++.+++++|++... ...+++++|+..+|+... ..+++|+++..|.
T Consensus 91 ih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~-------~~~~~E~~~~~~~ 162 (342)
T 2hrz_A 91 FHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPL-------PYPIPDEFHTTPL 162 (342)
T ss_dssp EECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSC-------CSSBCTTCCCCCS
T ss_pred EECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCC-------CCCcCCCCCCCCc
Confidence 999875421 12233445789999999999999987531 145666666666775431 3467888877666
Q ss_pred CccchHHHHHHHHH-----HhcCC-cceEEecCCceee-cCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhhc
Q 042242 174 SNNFYYVLEDLLKE-----KLAGK-VAWSVHRPGLLLG-SSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEYC 245 (303)
Q Consensus 174 ~~~~~y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 245 (303)
.+ |+.+|...| +.... ++++++|++.+|| ++...... ...+..+.. .. .+.+..+++.. ...
T Consensus 163 ~~---Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~----~~~ 232 (342)
T 2hrz_A 163 TS---YGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAA-SGFFSNILREPL--VGQEAVLPVPE----SIR 232 (342)
T ss_dssp SH---HHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSG-GGHHHHHHHHHH--TTCCEEECSCT----TCE
T ss_pred ch---HHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchh-HHHHHHHHHHHh--cCCCeeccCCC----ccc
Confidence 66 888877776 23333 8899999999998 44321110 011111111 22 24444444432 234
Q ss_pred ccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 246 LDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 246 ~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
.++++++|+|++++.++..+......+++||++ ++.+|+.|+++.+++.+|.+.
T Consensus 233 ~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp EEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHH
T ss_pred eeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCccc
Confidence 457899999999999887653200013799996 467999999999999998753
No 52
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=99.95 E-value=6.3e-27 Score=221.45 Aligned_cols=253 Identities=15% Similarity=0.228 Sum_probs=180.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHH-HHHHHhccCceeEEeecc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLD-IKRKLTLLEDVTHIFWVT 103 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~-l~~~~~~~~~V~~~~~~~ 103 (303)
++++|||||||||||++|+++|++..|++|++++|++.... ....+++++.+|+.|.++ +.++++++|.|+|+|+..
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~ 393 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 393 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence 45799999999999999999999434899999999876532 124578999999999765 788889999999998754
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC---C-CCccchH
Q 042242 104 WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV---S-KSNNFYY 179 (303)
Q Consensus 104 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~---p-~~~~~~y 179 (303)
.......++.+.+++|+.++.+++++|.+.+ .+++++|+..+|+... ..+++|+++.. | ..|...|
T Consensus 394 ~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~r~V~~SS~~vyg~~~-------~~~~~E~~~~~~~~p~~~p~~~Y 463 (660)
T 1z7e_A 394 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVYGMCS-------DKYFDEDHSNLIVGPVNKPRWIY 463 (660)
T ss_dssp CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGGBTCC-------SSSBCTTTCCEEECCTTCTTHHH
T ss_pred CccccccCHHHHHHhhhHHHHHHHHHHHHhC---CEEEEEecHHHcCCCC-------CcccCCCccccccCcccCCCCCc
Confidence 3322233445588999999999999998764 5777777766775432 34567776431 1 1233348
Q ss_pred HHHHHHHHH-----h--cCCcceEEecCCceeecCCCCc-------cchhhHHHHHHHHhhhCCCceeeCCchhhhhhhc
Q 042242 180 VLEDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSL-------YNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYC 245 (303)
Q Consensus 180 ~~~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 245 (303)
+.+|...|. . .+ ++++++||+.+||++.... ......+ ...+.+ +.++...+.. ...
T Consensus 464 ~~sK~~~E~~~~~~~~~~g-i~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~--~~~~~~--g~~~~~~g~g----~~~ 534 (660)
T 1z7e_A 464 SVSKQLLDRVIWAYGEKEG-LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQL--ILNLVE--GSPIKLIDGG----KQK 534 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCEEEEEECSEESTTSSCHHHHTTTCSCHHHHH--HHHHHH--TCCEEEEGGG----CCE
T ss_pred HHHHHHHHHHHHHHHHHcC-CCEEEECCCcccCCCccccccccccccchHHHH--HHHHHc--CCCcEEeCCC----CeE
Confidence 888877762 1 24 9999999999999754310 1111111 111222 4455444433 456
Q ss_pred ccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC-CccHHhhHHHHHHHhccc
Q 042242 246 LDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP-RFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 246 ~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~-~~s~~e~~~~i~~~~g~~ 299 (303)
.++++++|+|++++.++..+... ..|++||+++++ .+|+.|+++.+.+.+|.+
T Consensus 535 ~~~i~v~Dva~ai~~~l~~~~~~-~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 535 RCFTDIRDGIEALYRIIENAGNR-CDGEIINIGNPENEASIEELGEMLLASFEKH 588 (660)
T ss_dssp EECEEHHHHHHHHHHHHHCGGGT-TTTEEEEECCGGGEEEHHHHHHHHHHHHHHC
T ss_pred EEEEEHHHHHHHHHHHHhCcccc-CCCeEEEECCCCCCcCHHHHHHHHHHHhcCC
Confidence 77899999999999988765411 124899999986 899999999999999875
No 53
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=99.95 E-value=9.9e-28 Score=215.99 Aligned_cols=248 Identities=13% Similarity=0.041 Sum_probs=167.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------------------ccCCCeEEEEecCCCHHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------------------IQSSSYCFISCDLLNPLDI 86 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------------------~~~~~~~~~~~D~~~~~~l 86 (303)
..+++|||||||||||++|+++|+ ..|++|++++|++.... ....+++++.+|+.|.+.+
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQ-GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHT-TTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHH-cCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 345799999999999999999998 78999999999987210 1135899999999998877
Q ss_pred HHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 87 KRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 87 ~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
. .+.++|.|+|+++..... ....+.+++|+.++.+++++|.+.. .+++++|+..+ +.... +.....++.|
T Consensus 146 ~-~~~~~d~Vih~A~~~~~~---~~~~~~~~~Nv~g~~~l~~aa~~~~---~~~v~~SS~~~-G~~~~--~~~~~~~~~E 215 (427)
T 4f6c_A 146 V-LPENMDTIIHAGARTDHF---GDDDEFEKVNVQGTVDVIRLAQQHH---ARLIYVSTISV-GTYFD--IDTEDVTFSE 215 (427)
T ss_dssp C-CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHHTT---CEEEEEEEGGG-GSEEC--SSCSCCEECT
T ss_pred C-CcCCCCEEEECCcccCCC---CCHHHHHHHHHHHHHHHHHHHHhcC---CcEEEECchHh-CCCcc--CCCCCccccc
Confidence 7 667788899997754322 2233478999999999999999843 44555554334 22111 0012557888
Q ss_pred CCCCCCCCccchHHHHHHHHHH-----h-cCCcceEEecCCceeecCCCCcc--chhh-HHHHHHH-HhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKEK-----L-AGKVAWSVHRPGLLLGSSHRSLY--NFLG-CLCVYGA-VCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e~-----~-~~~~~~~ilRp~~v~G~~~~~~~--~~~~-~~~~~~~-~~~~~~~~~~~~g 236 (303)
+++..+..+...|+.+|...|. . .+ ++++++||+.|||+.....+ +... .+..+.. +.+ ..++.. +
T Consensus 216 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g-~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~ 291 (427)
T 4f6c_A 216 ADVYKGQLLTSPYTRSKFYSELKVLEAVNNG-LDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ--LDCIGV-S 291 (427)
T ss_dssp TCSCSSCCCCSHHHHHHHHHHHHHHHHHHTT-CCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHH--SSEEEH-H
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHHcC-CCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHh--cCCCCC-c
Confidence 8875443344458888887772 2 24 99999999999997644221 1000 1111111 111 222221 1
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
. . ....++++++|+|+++++++..+. . +++||+++++++++.|+++.+++ +|
T Consensus 292 ~---~-~~~~~~v~v~DvA~ai~~~~~~~~-~---g~~~~l~~~~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 292 M---A-EMPVDFSFVDTTARQIVALAQVNT-P---QIIYHVLSPNKMPVKSLLECVKR-KE 343 (427)
T ss_dssp H---H-TCEECCEEHHHHHHHHHHHTTSCC-C---CSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred c---c-cceEEEeeHHHHHHHHHHHHcCCC-C---CCEEEecCCCCCcHHHHHHHHHH-cC
Confidence 1 1 566789999999999999988775 3 38999999999999999999997 44
No 54
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=99.95 E-value=5.9e-27 Score=202.64 Aligned_cols=243 Identities=14% Similarity=0.084 Sum_probs=170.2
Q ss_pred EEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh--ccCceeEEeeccccc
Q 042242 30 VAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFWVTWAS 106 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~~~~~~ 106 (303)
+|||||||||||++|+++|++. .|++|++++|++... .+++++.+|+.|.+++.++++ ++|.|+|+++....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~- 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA- 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH-
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----cCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC-
Confidence 5899999999999999999943 389999999976542 257789999999999999998 67889999765321
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
....++.+.+++|+.++.+++++|++.+ ..+++++|+..+|+.... ..+..|+.+..|.++ |+.+|...
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~~~~~------~~~~~e~~~~~p~~~---Y~~sK~~~ 144 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQHR--VEKVVIPSTIGVFGPETP------KNKVPSITITRPRTM---FGVTKIAA 144 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCCTTSC------SSSBCSSSCCCCCSH---HHHHHHHH
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHcC--CCEEEEecCHHHhCCCCC------CCCccccccCCCCch---HHHHHHHH
Confidence 1123344588999999999999998763 446666666667754311 234667766655566 89888777
Q ss_pred HH-----h--cCCcceEEecCCceeecCCCCc---cchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHH
Q 042242 187 EK-----L--AGKVAWSVHRPGLLLGSSHRSL---YNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAE 256 (303)
Q Consensus 187 e~-----~--~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~ 256 (303)
|. . .+ ++++++||+.+||+..... .++... .+....+ +.++...+.. ....++++++|+|+
T Consensus 145 e~~~~~~~~~~~-~~~~~lR~~~~~g~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~----~~~~~~i~v~Dva~ 215 (317)
T 3ajr_A 145 ELLGQYYYEKFG-LDVRSLRYPGIISYKAEPTAGTTDYAVE--IFYYAVK--REKYKCYLAP----NRALPMMYMPDALK 215 (317)
T ss_dssp HHHHHHHHHHHC-CEEEEEEECEEECSSSCCCSCSSTHHHH--HHHHHHT--TCCEEECSCT----TCCEEEEEHHHHHH
T ss_pred HHHHHHHHHhcC-CeEEEEecCcEeccCCCCCCcchhHHHH--HHHHHHh--CCCceeecCc----cceeeeeEHHHHHH
Confidence 62 1 24 9999999999999642111 111111 1111111 2233333332 44567889999999
Q ss_pred HHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 257 QHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 257 a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
+++.++..+......+++||+++ ..+|+.|+++.+.+.+|.
T Consensus 216 a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~ 256 (317)
T 3ajr_A 216 ALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE 256 (317)
T ss_dssp HHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS
T ss_pred HHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCc
Confidence 99998877643211237999986 579999999999999883
No 55
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.95 E-value=1.3e-26 Score=220.95 Aligned_cols=265 Identities=14% Similarity=0.124 Sum_probs=178.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh--ccCc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT--LLED 95 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~--~~~~ 95 (303)
+++|+|||||||||||++|+++|+ +.|++|++++|+..... ....+++++.+|+.|.+++.++++ ++|.
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELI-ENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHH-HCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 346899999999999999999999 67999999999764321 113578899999999999999998 6788
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
|+|+|+..........+.+.+++|+.++.+++++|++.. ..+++++|+..+|+...... ...++.|+++..|..+
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~~iV~~SS~~vyg~~~~~~---~~~~~~E~~~~~p~~~ 162 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDATRFP---NMIPIPEECPLGPTNP 162 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGGGST---TCCSBCTTSCCCCCSH
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECcHHHhCCCcccc---ccCCccccCCCCCCCh
Confidence 999987543222223334578999999999999998763 34566666655775431100 1245677776655555
Q ss_pred cchHHHHHHHHHH-----h----cCCcceEEecCCceeecCCCCccc-----hhh-HHHHHHHHhhhCCCceeeCCch--
Q 042242 176 NFYYVLEDLLKEK-----L----AGKVAWSVHRPGLLLGSSHRSLYN-----FLG-CLCVYGAVCKHLNLPFVFGGTR-- 238 (303)
Q Consensus 176 ~~~y~~~k~~~e~-----~----~~~~~~~ilRp~~v~G~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~g~~-- 238 (303)
|+.+|...|. . .+ ++++++||+++||+.+..... ... .+.....+....+.++.+.|..
T Consensus 163 ---Y~~sK~~~E~~~~~~~~~~~~g-~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (699)
T 1z45_A 163 ---YGHTKYAIENILNDLYNSDKKS-WKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD 238 (699)
T ss_dssp ---HHHHHHHHHHHHHHHHHHSTTS-CEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred ---HHHHHHHHHHHHHHHHHhccCC-CcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCccc
Confidence 8888877762 1 23 899999999999975421000 000 1111122222222343333310
Q ss_pred -hhhhhhcccCccHHHHHHHHHHHhcCcCC---cCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 239 -EIWEEYCLDGSDSRLVAEQHIWVATNDDI---SSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 239 -~~~~~~~~~~~~~~d~a~a~~~~~~~~~~---~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
... ....++++++|+|++++.++..... ....+++||+++++.+|+.|+++.+++.+|++.+
T Consensus 239 ~~~g-~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~ 304 (699)
T 1z45_A 239 SRDG-TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP 304 (699)
T ss_dssp -CCS-SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCC
T ss_pred CCCC-CeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCC
Confidence 001 5667899999999999988764210 0011378999999999999999999999998765
No 56
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=99.95 E-value=1.2e-27 Score=219.98 Aligned_cols=247 Identities=13% Similarity=0.029 Sum_probs=167.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-------------------cccCCCeEEEEecCCCHHHHHH
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-------------------AIQSSSYCFISCDLLNPLDIKR 88 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-------------------~~~~~~~~~~~~D~~~~~~l~~ 88 (303)
+++|||||||||||++|+++|+ ..|++|++++|++.+. .....+++++.+|+.+.+.+.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQ-GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTB-TTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCeEEEECCccchHHHHHHHHH-hcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 4799999999999999999997 7899999999988731 112468999999999988777
Q ss_pred HHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 89 KLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 89 ~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.+.++|.|+|+++..... ....+..+.|+.++.+++++|.+..+ +++++|+..+ +.... +.....++.|++
T Consensus 228 ~~~~~D~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~---~~v~iSS~~v-G~~~~--~~~~~~~~~E~~ 298 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHF---GDDDEFEKVNVQGTVDVIRLAQQHHA---RLIYVSTISV-GTYFD--IDTEDVTFSEAD 298 (508)
T ss_dssp CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHTTTC---EEEEEEESCT-TSEEC--TTCSCCEECTTC
T ss_pred CccCCCEEEECCceecCC---CCHHHHhhhHHHHHHHHHHHHHhCCC---cEEEeCChhh-ccCCc--cCCcCccccccc
Confidence 667788899997754322 22233788999999999999997444 4444444333 11100 001245678887
Q ss_pred CCCCCCccchHHHHHHHHHH-----h-cCCcceEEecCCceeecCCCCcc--chhh-HHHHHHHHhhhCCCceeeCCchh
Q 042242 169 PRVSKSNNFYYVLEDLLKEK-----L-AGKVAWSVHRPGLLLGSSHRSLY--NFLG-CLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e~-----~-~~~~~~~ilRp~~v~G~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
+..+..+...|+.+|+..|. . .+ ++++++||+.|||+.....+ +... .+..+..... ....+. .+.
T Consensus 299 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g-i~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~-~~~-- 373 (508)
T 4f6l_B 299 VYKGQLLTSPYTRSKFYSELKVLEAVNNG-LDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL-QLDCIG-VSM-- 373 (508)
T ss_dssp SCSSBCCCSHHHHHHHHHHHHHHHHHHTT-CEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHT-TCSEEE-TTG--
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHHcC-CCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHH-HcCCCC-CCc--
Confidence 75433343448888887762 2 24 99999999999997644221 1100 1111111111 122222 221
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHh
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKF 296 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~ 296 (303)
. ...+++++++|+|+++++++..+. . +++||+++++++||.|+++.+++..
T Consensus 374 -g-~~~~~~v~v~DvA~ai~~~~~~~~-~---~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 374 -A-EMPVDFSFVDTTARQIVALAQVNT-P---QIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp -G-GSEEECEEHHHHHHHHHHHTTBCC-S---CSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred -c-CceEEEEcHHHHHHHHHHHHhCCC-C---CCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 1 567789999999999999998775 3 3899999999999999999998653
No 57
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=99.95 E-value=4.7e-27 Score=214.24 Aligned_cols=256 Identities=13% Similarity=0.079 Sum_probs=172.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcC--CCeEEEEecCCcccc--------c--------------cCCCeEEEEecCC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTA--NWKVYGIARKPEITA--------I--------------QSSSYCFISCDLL 81 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~--------~--------------~~~~~~~~~~D~~ 81 (303)
..+|+|||||||||||++|+++|++.. |++|++++|++.... . ...+++++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 346899999999999999999999422 899999999876421 0 1258999999998
Q ss_pred ------CHHHHHHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCC
Q 042242 82 ------NPLDIKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGL 155 (303)
Q Consensus 82 ------~~~~l~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 155 (303)
|.+.+.++++++|.|||+++.... .... +.+++|+.++.+++++|.+.. ..+++++|+..+|+..
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~---~~~~~Nv~gt~~ll~aa~~~~--~~~~V~iSS~~v~~~~--- 221 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYH---ELFGPNVAGTAELIRIALTTK--LKPFTYVSTADVGAAI--- 221 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCC---EEHHHHHHHHHHHHHHHTSSS--CCCEEEEEEGGGGTTS---
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCC-cCHH---HHHHHHHHHHHHHHHHHHhCC--CCeEEEEeehhhcCcc---
Confidence 667899999999999999876543 2222 268999999999999998763 3344555554566443
Q ss_pred CcccccCCcCcCCCCCCCCc--------cchHHHHHHHHH-----Hh--cCCcceEEecCCceeecCCCCc-cchhhHHH
Q 042242 156 PEEKQVRFYDEECPRVSKSN--------NFYYVLEDLLKE-----KL--AGKVAWSVHRPGLLLGSSHRSL-YNFLGCLC 219 (303)
Q Consensus 156 ~g~~~~~~~~e~~~~~p~~~--------~~~y~~~k~~~e-----~~--~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~ 219 (303)
...++.|+++..|..+ ...|+.+|...| +. .+ ++++++||++|||++.... .+....+.
T Consensus 222 ----~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g-i~~~ivRpg~v~G~~~~~g~~~~~~~~~ 296 (478)
T 4dqv_A 222 ----EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCA-LPVAVFRCGMILADTSYAGQLNMSDWVT 296 (478)
T ss_dssp ----CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHC-CCEEEEEECEEECCSSSSSCCCTTBHHH
T ss_pred ----CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhC-CCeEEEECceeeCCCccCCcCCHHHHHH
Confidence 1345666655432222 123888887777 22 24 9999999999999743211 11111111
Q ss_pred HHHHHhhhCCC-ceeeCC---chhhhhhhcccCccHHHHHHHHHHHhcC----cCCcCCCCceEEeecCCC--ccHHhhH
Q 042242 220 VYGAVCKHLNL-PFVFGG---TREIWEEYCLDGSDSRLVAEQHIWVATN----DDISSTKGQAFNAINGPR--FTWKEIW 289 (303)
Q Consensus 220 ~~~~~~~~~~~-~~~~~g---~~~~~~~~~~~~~~~~d~a~a~~~~~~~----~~~~~~~g~~yni~~~~~--~s~~e~~ 289 (303)
.+.......+. |..+.+ .+... +...++++++|+|++++.++.. +... +++||+++++. +|+.|++
T Consensus 297 ~l~~~~~~~g~~P~~~~~~~~~G~~~-~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~---~~~ynv~~~~~~~~s~~el~ 372 (478)
T 4dqv_A 297 RMVLSLMATGIAPRSFYEPDSEGNRQ-RAHFDGLPVTFVAEAIAVLGARVAGSSLAG---FATYHVMNPHDDGIGLDEYV 372 (478)
T ss_dssp HHHHHHHHHCEEESCSBCCCTTSCCC-CCCCCEEEHHHHHHHHHHHHHTTC-CCCCS---EEEEEESCCCCSSCSHHHHH
T ss_pred HHHHHHHHcCcccccccccccccccc-cceeeeeeHHHHHHHHHHHHhhcccCCCCC---CceEEecCCCCCCcCHHHHH
Confidence 11111111122 212111 11111 4567889999999999998875 3333 48999999987 9999999
Q ss_pred HHHHHHhcccC
Q 042242 290 PSIGKKFGVKV 300 (303)
Q Consensus 290 ~~i~~~~g~~~ 300 (303)
+.+++. |.+.
T Consensus 373 ~~l~~~-g~~~ 382 (478)
T 4dqv_A 373 DWLIEA-GYPI 382 (478)
T ss_dssp HHHHHT-TCSC
T ss_pred HHHHHc-CCCc
Confidence 999996 7664
No 58
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=99.95 E-value=2.2e-26 Score=196.28 Aligned_cols=216 Identities=14% Similarity=0.109 Sum_probs=158.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcC--CCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTA--NWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWA 105 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~ 105 (303)
|+|||||||||||++++++|+ +. |++|++++|++.+.. ....+++++.+|+.|.+++.++++++|.|+|+++...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~-~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~- 78 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLL-KKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHY- 78 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHT-TTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCS-
T ss_pred CeEEEEcCCchHHHHHHHHHH-HhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCc-
Confidence 479999999999999999999 56 899999999876532 1235788999999999999999999999999976421
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHH
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLL 185 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~ 185 (303)
. .+.|+.++.+++++|++.+ ..+++++|+...| . . ..+ |+.+|..
T Consensus 79 --~-------~~~n~~~~~~l~~a~~~~~--~~~~v~~Ss~~~~-----------~------~----~~~---y~~~K~~ 123 (287)
T 2jl1_A 79 --D-------NTLLIVQHANVVKAARDAG--VKHIAYTGYAFAE-----------E------S----IIP---LAHVHLA 123 (287)
T ss_dssp --C-------HHHHHHHHHHHHHHHHHTT--CSEEEEEEETTGG-----------G------C----CST---HHHHHHH
T ss_pred --C-------chHHHHHHHHHHHHHHHcC--CCEEEEECCCCCC-----------C------C----CCc---hHHHHHH
Confidence 1 1568999999999998763 3455555543232 0 0 123 8888877
Q ss_pred HHHh---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHh
Q 042242 186 KEKL---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVA 262 (303)
Q Consensus 186 ~e~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~ 262 (303)
.|.. .+ ++++++||+.++|+.. ..++.. .+.. +......+ ....++++++|+|++++.++
T Consensus 124 ~E~~~~~~~-~~~~ilrp~~~~~~~~---~~~~~~-----~~~~--~~~~~~~~------~~~~~~i~~~Dva~~~~~~~ 186 (287)
T 2jl1_A 124 TEYAIRTTN-IPYTFLRNALYTDFFV---NEGLRA-----STES--GAIVTNAG------SGIVNSVTRNELALAAATVL 186 (287)
T ss_dssp HHHHHHHTT-CCEEEEEECCBHHHHS---SGGGHH-----HHHH--TEEEESCT------TCCBCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHcC-CCeEEEECCEeccccc---hhhHHH-----HhhC--CceeccCC------CCccCccCHHHHHHHHHHHh
Confidence 7632 24 9999999998887421 111111 1111 22222223 44567899999999999998
Q ss_pred cCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 263 TNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 263 ~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
..+... |++||+++++.+|+.|+++.+++.+|++.+
T Consensus 187 ~~~~~~---g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 222 (287)
T 2jl1_A 187 TEEGHE---NKTYNLVSNQPWTFDELAQILSEVSGKKVV 222 (287)
T ss_dssp TSSSCT---TEEEEECCSSCBCHHHHHHHHHHHHSSCCE
T ss_pred cCCCCC---CcEEEecCCCcCCHHHHHHHHHHHHCCcce
Confidence 876433 489999999999999999999999998753
No 59
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=99.94 E-value=1.1e-25 Score=190.43 Aligned_cols=227 Identities=15% Similarity=0.093 Sum_probs=167.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCceeEEeeccccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTHIFWVTWAS 106 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~~~~~~~ 106 (303)
|+|+||||||+||++++++|+ + |++|++++|++... ++ +.+|+.|.+++.+++++ +|.|+|+++.....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r~~~~~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 71 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E-RHEVIKVYNSSEIQ----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD 71 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T-TSCEEEEESSSCCT----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHh-c-CCeEEEecCCCcCC----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence 379999999999999999998 5 79999999987431 23 78999999999999987 78899998754332
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
....+..+.+++|+.++.++++++++.+. +++++|+..+|++. ..++.|+++..|..+ |+.+|...
T Consensus 72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~iv~~SS~~~~~~~--------~~~~~e~~~~~~~~~---Y~~sK~~~ 137 (273)
T 2ggs_A 72 KCEIEKEKAYKINAEAVRHIVRAGKVIDS---YIVHISTDYVFDGE--------KGNYKEEDIPNPINY---YGLSKLLG 137 (273)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTC---EEEEEEEGGGSCSS--------SCSBCTTSCCCCSSH---HHHHHHHH
T ss_pred hhhhCHHHHHHHhHHHHHHHHHHHHHhCC---eEEEEecceeEcCC--------CCCcCCCCCCCCCCH---HHHHHHHH
Confidence 22334455899999999999999987643 55566665566443 236778777665555 99999988
Q ss_pred HHh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 187 EKL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 187 e~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
|.. .. ++++++||+.+|| +.. +...+ ...+.. +.++...+ . ..++++++|+|++++.++..+
T Consensus 138 e~~~~~-~~~~~iR~~~v~G--~~~---~~~~~--~~~~~~--~~~~~~~~------~-~~~~~~~~dva~~i~~~~~~~ 200 (273)
T 2ggs_A 138 ETFALQ-DDSLIIRTSGIFR--NKG---FPIYV--YKTLKE--GKTVFAFK------G-YYSPISARKLASAILELLELR 200 (273)
T ss_dssp HHHHCC-TTCEEEEECCCBS--SSS---HHHHH--HHHHHT--TCCEEEES------C-EECCCBHHHHHHHHHHHHHHT
T ss_pred HHHHhC-CCeEEEecccccc--ccH---HHHHH--HHHHHc--CCCEEeec------C-CCCceEHHHHHHHHHHHHhcC
Confidence 853 34 7899999999998 221 11111 111222 33444444 2 346889999999999988765
Q ss_pred CCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 266 DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 266 ~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
. + ++||+++ +.+|+.|+++.+++.+|++.+
T Consensus 201 ~--~---g~~~i~~-~~~s~~e~~~~~~~~~g~~~~ 230 (273)
T 2ggs_A 201 K--T---GIIHVAG-ERISRFELALKIKEKFNLPGE 230 (273)
T ss_dssp C--C---EEEECCC-CCEEHHHHHHHHHHHTTCCSC
T ss_pred c--C---CeEEECC-CcccHHHHHHHHHHHhCCChh
Confidence 3 2 5899999 999999999999999998754
No 60
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=99.94 E-value=2.3e-26 Score=192.33 Aligned_cols=233 Identities=14% Similarity=0.067 Sum_probs=158.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTW 104 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~ 104 (303)
+++++|+||||+|+||++++++|++.. |++|++++|++.+......+++++.+|+.|.+++.++++++|.|+|+++...
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 346899999999999999999999432 8999999998655332245788999999999999999999999999976532
Q ss_pred ccC----------C---hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 105 ASQ----------F---ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 105 ~~~----------~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
... . .....+.+++|+.++.++++++++.. ..+++++|+...|. +..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~~---------------~~~~~~ 144 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMGGTN---------------PDHPLN 144 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETTTTC---------------TTCGGG
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC--CCEEEEEcCccCCC---------------CCCccc
Confidence 110 0 01111257899999999999998763 33555555432221 111111
Q ss_pred CCCccchHHHHHHHHHHh-cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 172 SKSNNFYYVLEDLLKEKL-AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e~~-~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
.+....|..+|...|.. +.. ++++++||+.+||+..... .+... ...++ + .....++
T Consensus 145 -~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~-~~~~~----------~~~~~--------~-~~~~~~~ 203 (253)
T 1xq6_A 145 -KLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-ELLVG----------KDDEL--------L-QTDTKTV 203 (253)
T ss_dssp -GGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS-CEEEE----------STTGG--------G-GSSCCEE
T ss_pred -cccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh-hhhcc----------CCcCC--------c-CCCCcEE
Confidence 11111267777777632 223 9999999999999643211 11000 01111 1 1123478
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCC---CccHHhhHHHHHHHhccc
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGP---RFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~---~~s~~e~~~~i~~~~g~~ 299 (303)
+++|+|+++++++..+... +++||+++++ .+|+.|+++.+++++|++
T Consensus 204 ~~~Dva~~~~~~~~~~~~~---g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 204 PRADVAEVCIQALLFEEAK---NKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp EHHHHHHHHHHHTTCGGGT---TEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred cHHHHHHHHHHHHcCcccc---CCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 8999999999998876543 4899999864 599999999999999974
No 61
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=99.94 E-value=5e-26 Score=192.15 Aligned_cols=220 Identities=13% Similarity=0.042 Sum_probs=166.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS 106 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~ 106 (303)
|+|+||||||||+||++|+++|+ +.|++|++++|++.+. ...+++++.+|+.|.+++.++++++|.|+|+++.. .
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~--~ 75 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLG-TLAHEVRLSDIVDLGA--AEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVS--V 75 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGG-GTEEEEEECCSSCCCC--CCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCC--S
T ss_pred CCceEEEECCCCHHHHHHHHHHH-hCCCEEEEEeCCCccc--cCCCccEEEccCCCHHHHHHHHcCCCEEEECCcCC--C
Confidence 35799999999999999999999 6789999999987542 23568899999999999999999999999997754 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
.... .+.+++|+.++.++++++++. ...+++++|+..+|+.... ..+++|+++..|..+ |+.+|...
T Consensus 76 ~~~~--~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~------~~~~~E~~~~~~~~~---Y~~sK~~~ 142 (267)
T 3ay3_A 76 ERPW--NDILQANIIGAYNLYEAARNL--GKPRIVFASSNHTIGYYPR------TTRIDTEVPRRPDSL---YGLSKCFG 142 (267)
T ss_dssp CCCH--HHHHHHTHHHHHHHHHHHHHT--TCCEEEEEEEGGGSTTSBT------TSCBCTTSCCCCCSH---HHHHHHHH
T ss_pred CCCH--HHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCHHHhCCCCC------CCCCCCCCCCCCCCh---HHHHHHHH
Confidence 2222 237899999999999999875 2446666666667754321 346888887766666 88887776
Q ss_pred HH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHH
Q 042242 187 EK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIW 260 (303)
Q Consensus 187 e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~ 260 (303)
|. .... ++++++||+.+|+. +. .+ ....++++++|+|++++.
T Consensus 143 e~~~~~~~~~~gi~~~~lrp~~v~~~-~~-------------------------~~------~~~~~~~~~~dva~~~~~ 190 (267)
T 3ay3_A 143 EDLASLYYHKFDIETLNIRIGSCFPK-PK-------------------------DA------RMMATWLSVDDFMRLMKR 190 (267)
T ss_dssp HHHHHHHHHTTCCCEEEEEECBCSSS-CC-------------------------SH------HHHHHBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeceeecCC-CC-------------------------CC------CeeeccccHHHHHHHHHH
Confidence 62 2233 99999999999951 10 00 222346789999999999
Q ss_pred HhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 261 VATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 261 ~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++..+...+ .+||+.++...++.|+.+. +.+|.++.
T Consensus 191 ~~~~~~~~~---~~~~~~~~~~~~~~d~~~~--~~lg~~p~ 226 (267)
T 3ay3_A 191 AFVAPKLGC---TVVYGASANTESWWDNDKS--AFLGWVPQ 226 (267)
T ss_dssp HHHSSCCCE---EEEEECCSCSSCCBCCGGG--GGGCCCCC
T ss_pred HHhCCCCCc---eeEecCCCccccccCHHHH--HHcCCCCC
Confidence 888765322 6899998888899999887 88887654
No 62
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=99.94 E-value=4.2e-26 Score=199.20 Aligned_cols=254 Identities=14% Similarity=0.093 Sum_probs=169.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEE-EecCCCHHHHHHHHhccCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFI-SCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~-~~D~~~~~~l~~~~~~~~~ 95 (303)
.+++++|||||||||||++|+++|+ +.|++|++++|+..+... ...+++++ .+|++|.+++.++++++|.
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLL-EHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 3456899999999999999999999 679999999997654210 02568888 7999999999999998999
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC-----
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR----- 170 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~----- 170 (303)
|+|+|+...... ++.+.+++|+.++.+++++|.+. ....+++++|+..+|+...... ...+++|++..
T Consensus 87 vih~A~~~~~~~---~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~~~~~~~~~---~~~~~~E~~~~~~~~~ 159 (342)
T 1y1p_A 87 VAHIASVVSFSN---KYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNV---EGIYLDEKSWNLESID 159 (342)
T ss_dssp EEECCCCCSCCS---CHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTC---CCCEECTTCCCHHHHH
T ss_pred EEEeCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHHhcCCCCCC---CCcccCccccCchhhh
Confidence 999987644332 23348999999999999999853 2345677777666664321100 01356666521
Q ss_pred --------CCCCccchHHHHHHHHHH-----hc--CC-cceEEecCCceeecCCCCccc--hhhHHHHHHHHhhhCCCce
Q 042242 171 --------VSKSNNFYYVLEDLLKEK-----LA--GK-VAWSVHRPGLLLGSSHRSLYN--FLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 171 --------~p~~~~~~y~~~k~~~e~-----~~--~~-~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 232 (303)
.|..|...|+.+|...|. .. +. ++++++||+.+||+....... ....+ ...+.+ +.+.
T Consensus 160 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~--~~~~~~--~~~~ 235 (342)
T 1y1p_A 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGW--MMSLFN--GEVS 235 (342)
T ss_dssp HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHH--HHHHHT--TCCC
T ss_pred hhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHH--HHHHHc--CCCc
Confidence 112233448888887762 11 11 889999999999975432111 11111 111222 3332
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
.+.+. ....++++++|+|++++.++..+...+ +.| ++.+..+|+.|+++.+.+.+|.+
T Consensus 236 ~~~~~-----~~~~~~v~v~Dva~a~~~~~~~~~~~g---~~~-~~~g~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 236 PALAL-----MPPQYYVSAVDIGLLHLGCLVLPQIER---RRV-YGTAGTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHHT-----CCSEEEEEHHHHHHHHHHHHHCTTCCS---CEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred ccccc-----CCcCCEeEHHHHHHHHHHHHcCcccCC---ceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence 21111 123468899999999999887654332 444 45567899999999999999864
No 63
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=99.94 E-value=2.2e-26 Score=188.70 Aligned_cols=206 Identities=17% Similarity=0.162 Sum_probs=154.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCC-HHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLN-PLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~-~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
|+|+||||||+||++++++|+ +.|++|++++|++.+... ..+++++++|+.| .+++.++++++|.|+|+++.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~- 77 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLS-TTDYQIYAGARKVEQVPQ-YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKS- 77 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHT-TSSCEEEEEESSGGGSCC-CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSS-
T ss_pred CeEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCccchhh-cCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCC-
Confidence 389999999999999999999 689999999999765432 2689999999999 999999999999999997754311
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
.+++|+.++.++++++++.. ..+++++|+...|. ..++.| .+..|..+ |+.+|...|
T Consensus 78 -------~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~~~----------~~~~~e-~~~~~~~~---Y~~sK~~~e 134 (219)
T 3dqp_A 78 -------LLKVDLYGAVKLMQAAEKAE--VKRFILLSTIFSLQ----------PEKWIG-AGFDALKD---YYIAKHFAD 134 (219)
T ss_dssp -------CCCCCCHHHHHHHHHHHHTT--CCEEEEECCTTTTC----------GGGCCS-HHHHHTHH---HHHHHHHHH
T ss_pred -------cEeEeHHHHHHHHHHHHHhC--CCEEEEECcccccC----------CCcccc-cccccccH---HHHHHHHHH
Confidence 57889999999999998763 44666666543331 223444 22222333 888888777
Q ss_pred Hh--cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcC
Q 042242 188 KL--AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATN 264 (303)
Q Consensus 188 ~~--~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~ 264 (303)
.. ... ++++++||+.+||+..... +.+ + ....++++++|+|++++.++.+
T Consensus 135 ~~~~~~~~i~~~ilrp~~v~g~~~~~~--------------------~~~-~------~~~~~~i~~~Dva~~i~~~l~~ 187 (219)
T 3dqp_A 135 LYLTKETNLDYTIIQPGALTEEEATGL--------------------IDI-N------DEVSASNTIGDVADTIKELVMT 187 (219)
T ss_dssp HHHHHSCCCEEEEEEECSEECSCCCSE--------------------EEE-S------SSCCCCEEHHHHHHHHHHHHTC
T ss_pred HHHHhccCCcEEEEeCceEecCCCCCc--------------------ccc-C------CCcCCcccHHHHHHHHHHHHhC
Confidence 33 233 9999999999999532211 111 1 3345688999999999999988
Q ss_pred cCCcCCCCceEEeecCCCccHHhhHHH
Q 042242 265 DDISSTKGQAFNAINGPRFTWKEIWPS 291 (303)
Q Consensus 265 ~~~~~~~g~~yni~~~~~~s~~e~~~~ 291 (303)
+...+ ++||++++. .+++|+++.
T Consensus 188 ~~~~g---~~~~i~~g~-~~~~e~~~~ 210 (219)
T 3dqp_A 188 DHSIG---KVISMHNGK-TAIKEALES 210 (219)
T ss_dssp GGGTT---EEEEEEECS-EEHHHHHHT
T ss_pred ccccC---cEEEeCCCC-ccHHHHHHH
Confidence 76444 899998875 899998763
No 64
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=99.94 E-value=3.7e-26 Score=199.40 Aligned_cols=253 Identities=16% Similarity=0.139 Sum_probs=156.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------c-cCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------I-QSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~-~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
|+|+|||||||||||++|+++|+ +.||+|+++.|++.... . ...+++++.+|+.|.+++.++++++|.|+|
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 86 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLL-QKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH 86 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHH-HTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHH-HCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence 57899999999999999999999 68999999999765321 1 124688999999999999999999999999
Q ss_pred EeecccccCChHHH-HHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccc-ccccccCCCcccccCCcCcCCCCC-----
Q 042242 99 IFWVTWASQFASDM-HKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMK-HYVSLQGLPEEKQVRFYDEECPRV----- 171 (303)
Q Consensus 99 ~~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~-~y~~~~~~~g~~~~~~~~e~~~~~----- 171 (303)
+|+.... ...++ .+.+++|+.++.+++++|.+.. ...+++++|+.. +|+.... + ...+++|+++..
T Consensus 87 ~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~~~--~--~~~~~~E~~~~~~~~~~ 159 (338)
T 2rh8_A 87 VATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQLD--G--TGLVVDEKNWTDIEFLT 159 (338)
T ss_dssp ESSCCCC-----------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHHHT--C--SCCCCCTTTTTCC----
T ss_pred eCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCCcC--C--CCcccChhhccchhhcc
Confidence 9864321 11222 2378999999999999998763 245666666544 3322110 0 012455554211
Q ss_pred CCCc-cchHHH-----HHHHHHHhc--CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC-Cchhhhh
Q 042242 172 SKSN-NFYYVL-----EDLLKEKLA--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG-GTREIWE 242 (303)
Q Consensus 172 p~~~-~~~y~~-----~k~~~e~~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 242 (303)
|..| .+.|+. |.++.++.. + ++++++||++|||++....... .+........ +.+..++ +....+.
T Consensus 160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g-i~~~~lrp~~v~Gp~~~~~~~~--~~~~~~~~~~--g~~~~~~~~~~~~~~ 234 (338)
T 2rh8_A 160 SAKPPTWGYPASKTLAEKAAWKFAEENN-IDLITVIPTLMAGSSLTSDVPS--SIGLAMSLIT--GNEFLINGMKGMQML 234 (338)
T ss_dssp ---CCCCCCTTSCCHHHHHHHHHHHHHT-CCEEEEEECEEESCCSSSSCCH--HHHHHHHHHH--TCHHHHHHHHHHHHH
T ss_pred ccCCccchHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCceECCCCCCCCCc--hHHHHHHHHc--CCccccccccccccc
Confidence 1111 112554 444443332 4 9999999999999754322111 1111111111 2221111 0000000
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
....++++++|+|++++.++..+.. ++.||++++ .+|+.|+++.+.+.++
T Consensus 235 ~~~~~~i~v~Dva~a~~~~~~~~~~----~~~~~~~~~-~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 235 SGSVSIAHVEDVCRAHIFVAEKESA----SGRYICCAA-NTSVPELAKFLSKRYP 284 (338)
T ss_dssp HSSEEEEEHHHHHHHHHHHHHCTTC----CEEEEECSE-EECHHHHHHHHHHHCT
T ss_pred cCcccEEEHHHHHHHHHHHHcCCCc----CCcEEEecC-CCCHHHHHHHHHHhCC
Confidence 1223689999999999998876532 257888764 5899999999998876
No 65
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=99.94 E-value=3.1e-25 Score=194.02 Aligned_cols=227 Identities=15% Similarity=0.100 Sum_probs=163.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcC-CC-eEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTA-NW-KVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~-g~-~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
+++|+||||||||+||++++++|+ +. |+ +|++++|++.+.. ....+++++.+|++|.+++.++++++|.|+|
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~-~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVL-DTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHH-hhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 346899999999999999999999 46 86 9999999865432 1235789999999999999999999999999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
+|+..........+.+.+++|+.++.++++++.+.+ ..+++++|+...| .|.++
T Consensus 98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS~~~~---------------------~p~~~--- 151 (344)
T 2gn4_A 98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALSTDKAA---------------------NPINL--- 151 (344)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGS---------------------SCCSH---
T ss_pred CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecCCccC---------------------CCccH---
Confidence 987654332333445689999999999999999863 4566666553222 12344
Q ss_pred HHHHHHHHHH-----hc---CC-cceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCC-ceeeCCchhhhhhhccc
Q 042242 179 YVLEDLLKEK-----LA---GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNL-PFVFGGTREIWEEYCLD 247 (303)
Q Consensus 179 y~~~k~~~e~-----~~---~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~~~~~~~~~~~ 247 (303)
|+.+|...|. .. .. ++++++||++|||+... .... +.. +.. +. ++.+.. . ....+
T Consensus 152 Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----~i~~---~~~~~~~--g~~~~~i~~-~----~~~r~ 217 (344)
T 2gn4_A 152 YGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----VVPF---FKKLVQN--KASEIPITD-I----RMTRF 217 (344)
T ss_dssp HHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----HHHH---HHHHHHH--TCCCEEESC-T----TCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----HHHH---HHHHHHc--CCCceEEeC-C----CeEEe
Confidence 8888877762 21 12 89999999999996432 1111 111 222 33 444432 1 33345
Q ss_pred CccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 248 GSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 248 ~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
+++++|+|++++.++..+. .|++||+.++ .+|+.|+++.+++.++.
T Consensus 218 ~i~v~D~a~~v~~~l~~~~----~g~~~~~~~~-~~s~~el~~~i~~~~~~ 263 (344)
T 2gn4_A 218 WITLDEGVSFVLKSLKRMH----GGEIFVPKIP-SMKMTDLAKALAPNTPT 263 (344)
T ss_dssp EECHHHHHHHHHHHHHHCC----SSCEEEECCC-EEEHHHHHHHHCTTCCE
T ss_pred eEEHHHHHHHHHHHHhhcc----CCCEEecCCC-cEEHHHHHHHHHHhCCe
Confidence 7889999999999887652 2479998776 69999999999876643
No 66
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=99.93 E-value=3e-25 Score=187.40 Aligned_cols=219 Identities=11% Similarity=0.056 Sum_probs=163.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS 106 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~ 106 (303)
++|+||||||+|+||++++++|+ +.|++|++++|++.+.. ..+++++.+|++|.+++.++++++|.|+|+++.. .
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~-~~G~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~--~ 76 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLA-PMAEILRLADLSPLDPA--GPNEECVQCDLADANAVNAMVAGCDGIVHLGGIS--V 76 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTG-GGEEEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC--S
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-hcCCEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc--C
Confidence 34789999999999999999999 68999999999876532 4678999999999999999999999999998763 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
..... +.+++|+.++.++++++++.. ..+++++|+...|+.... ..++.|+.+..|..+ |+.+|...
T Consensus 77 ~~~~~--~~~~~N~~g~~~l~~a~~~~~--~~~iv~~SS~~~~g~~~~------~~~~~e~~~~~~~~~---Y~~sK~~~ 143 (267)
T 3rft_A 77 EKPFE--QILQGNIIGLYNLYEAARAHG--QPRIVFASSNHTIGYYPQ------TERLGPDVPARPDGL---YGVSKCFG 143 (267)
T ss_dssp CCCHH--HHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGTTSBT------TSCBCTTSCCCCCSH---HHHHHHHH
T ss_pred cCCHH--HHHHHHHHHHHHHHHHHHHcC--CCEEEEEcchHHhCCCCC------CCCCCCCCCCCCCCh---HHHHHHHH
Confidence 22233 379999999999999998763 345566666556643321 446778777665666 99888876
Q ss_pred HH-----h--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHH
Q 042242 187 EK-----L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHI 259 (303)
Q Consensus 187 e~-----~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~ 259 (303)
|. . .+ ++++++||+.|+|+... + ....++++++|+++.+.
T Consensus 144 e~~~~~~a~~~g-~~~~~vr~~~v~~~~~~--------------------------~------~~~~~~~~~~d~a~~~~ 190 (267)
T 3rft_A 144 ENLARMYFDKFG-QETALVRIGSCTPEPNN--------------------------Y------RMLSTWFSHDDFVSLIE 190 (267)
T ss_dssp HHHHHHHHHHHC-CCEEEEEECBCSSSCCS--------------------------T------THHHHBCCHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CeEEEEEeecccCCCCC--------------------------C------CceeeEEcHHHHHHHHH
Confidence 62 2 23 89999999999984111 1 11223567888898888
Q ss_pred HHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 260 WVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 260 ~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
.++..+...+ .++++.++++.++.++... +.+|.+++
T Consensus 191 ~~~~~~~~~~---~~~~~~s~~~~~~~~~~~~--~~~g~~p~ 227 (267)
T 3rft_A 191 AVFRAPVLGC---PVVWGASANDAGWWDNSHL--GFLGWKPK 227 (267)
T ss_dssp HHHHCSCCCS---CEEEECCCCTTCCBCCGGG--GGGCCCCC
T ss_pred HHHhCCCCCc---eEEEEeCCCCCCcccChhH--HHCCCCCC
Confidence 8887765433 6788888888888887543 67777654
No 67
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=99.93 E-value=2e-25 Score=193.35 Aligned_cols=244 Identities=16% Similarity=0.103 Sum_probs=155.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec-CCcc---cc-c-cC----CCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIAR-KPEI---TA-I-QS----SSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~---~~-~-~~----~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
+|+|||||||||||++|+++|+ ..|++|++++| ++.. .. . .. .+++++.+|++|.+++.++++++|.|+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 79 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLL-ENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF 79 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred CCEEEEECChhHHHHHHHHHHH-HCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence 4789999999999999999999 68999999998 5422 10 0 11 246788999999999999999999999
Q ss_pred EEeecccccCChHH-HHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccc-cccccCCCcccccCCcCcCCCCC----
Q 042242 98 HIFWVTWASQFASD-MHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKH-YVSLQGLPEEKQVRFYDEECPRV---- 171 (303)
Q Consensus 98 ~~~~~~~~~~~~~~-~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~-y~~~~~~~g~~~~~~~~e~~~~~---- 171 (303)
|+|+.. .....+ ..+.+++|+.++.+++++|.+. ....+++++|+... |+... ...+++|+++..
T Consensus 80 h~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~-~~~~~iV~~SS~~~~~~~~~------~~~~~~e~~~~~~~~~ 150 (322)
T 2p4h_X 80 HTASPI--DFAVSEPEEIVTKRTVDGALGILKACVNS-KTVKRFIYTSSGSAVSFNGK------DKDVLDESDWSDVDLL 150 (322)
T ss_dssp ECCCCC----------CHHHHHHHHHHHHHHHHHTTC-SSCCEEEEEEEGGGTSCSSS------CCSEECTTCCCCHHHH
T ss_pred EcCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccHHHcccCCC------CCeecCCccccchhhh
Confidence 998532 111111 1237899999999999999876 12345555554432 32211 122455554221
Q ss_pred -CCCcc-chHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhh
Q 042242 172 -SKSNN-FYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 172 -p~~~~-~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (303)
|..|. +.|+.+|.+.|. .... ++++++||+.|||+........ .......... +.+..++.
T Consensus 151 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~--~~~~~~~~~~--g~~~~~~~------- 219 (322)
T 2p4h_X 151 RSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPD--SIEKALVLVL--GKKEQIGV------- 219 (322)
T ss_dssp HHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCH--HHHHHTHHHH--SCGGGCCE-------
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCc--hHHHHHHHHh--CCCccCcC-------
Confidence 01111 138888877762 2212 9999999999999754322111 1111111111 22212221
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
...++++++|+|++++.++..+... +.|| ++++.+|+.|+++.+++.++
T Consensus 220 ~~~~~i~v~Dva~a~~~~~~~~~~~----g~~~-~~~~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 220 TRFHMVHVDDVARAHIYLLENSVPG----GRYN-CSPFIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp EEEEEEEHHHHHHHHHHHHHSCCCC----EEEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred CCcCEEEHHHHHHHHHHHhhCcCCC----CCEE-EcCCCCCHHHHHHHHHHhCC
Confidence 1126889999999999988765432 3498 56678999999999998774
No 68
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=99.93 E-value=1.7e-25 Score=195.20 Aligned_cols=246 Identities=13% Similarity=0.139 Sum_probs=159.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----c-cC----CCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----I-QS----SSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~-~~----~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
++++||||||+||||++|+++|+ +.||+|++++|++.... . .. .+++++.+|++|.+++.++++++|.|+
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 82 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLL-ERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF 82 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHH-HCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 35799999999999999999999 68999999999865311 0 11 257889999999999999999999999
Q ss_pred EEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccc-ccccccCCCcccccCCcCcCCCCCC----
Q 042242 98 HIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMK-HYVSLQGLPEEKQVRFYDEECPRVS---- 172 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~-~y~~~~~~~g~~~~~~~~e~~~~~p---- 172 (303)
|+|+..... ......+.+++|+.++.+++++|.+.. ...+++++|+.. +|+... ...+++|+++..+
T Consensus 83 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~~------~~~~~~E~~~~~~~~~~ 154 (337)
T 2c29_D 83 HVATPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQEH------QLPVYDESCWSDMEFCR 154 (337)
T ss_dssp ECCCCCCSS-CSSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSSS------CCSEECTTCCCCHHHHH
T ss_pred EeccccCCC-CCChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCCC------CCcccCcccCCchhhhc
Confidence 997643211 111112378999999999999998763 245666666654 333221 1223555542210
Q ss_pred --CCccchHHHHHHHHHH-----h--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhh
Q 042242 173 --KSNNFYYVLEDLLKEK-----L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 173 --~~~~~~y~~~k~~~e~-----~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (303)
..+.+.|+.+|.+.|. . .+ ++++++||++|||+....... ..+........ +.+..+.. .
T Consensus 155 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g-i~~~~lrp~~v~Gp~~~~~~~--~~~~~~~~~~~--g~~~~~~~------~ 223 (337)
T 2c29_D 155 AKKMTAWMYFVSKTLAEQAAWKYAKENN-IDFITIIPTLVVGPFIMSSMP--PSLITALSPIT--GNEAHYSI------I 223 (337)
T ss_dssp HHCCTTHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEECEEESCCSCSSCC--HHHHHHTHHHH--TCGGGHHH------H
T ss_pred ccCCccchHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCceECCCCCCCCC--chHHHHHHHHc--CCCccccc------c
Confidence 0123348888887762 2 24 999999999999975432211 11111000011 11111110 1
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
....+++++|+|++++.++..+.. ++.|++++ ..+|+.|+++.+++.++
T Consensus 224 ~~~~~i~v~Dva~a~~~~~~~~~~----~~~~~~~~-~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 224 RQGQFVHLDDLCNAHIYLFENPKA----EGRYICSS-HDCIILDLAKMLREKYP 272 (337)
T ss_dssp TEEEEEEHHHHHHHHHHHHHCTTC----CEEEEECC-EEEEHHHHHHHHHHHCT
T ss_pred CCCCEEEHHHHHHHHHHHhcCccc----CceEEEeC-CCCCHHHHHHHHHHHCC
Confidence 123378999999999998876532 24686655 46899999999998874
No 69
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=99.93 E-value=1.3e-25 Score=196.76 Aligned_cols=225 Identities=12% Similarity=0.046 Sum_probs=160.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh--ccCc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT--LLED 95 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~--~~~~ 95 (303)
+++++||||||||+||++|++.|+ +.|++|++++|++.... ....+++++.+|+.|.+++.++++ ++|.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~ 86 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASL-DAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDI 86 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHH-HTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHH-HCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence 334789999999999999999999 57899999999873211 123689999999999999999999 8888
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
|||+++. .|+.++.+++++|++.+ .+.+++. | .|+ .+..|+.+..|..+
T Consensus 87 Vi~~a~~---------------~n~~~~~~l~~aa~~~g-~v~~~v~-S---~~g-----------~~~~e~~~~~p~~~ 135 (346)
T 3i6i_A 87 VVSTVGG---------------ESILDQIALVKAMKAVG-TIKRFLP-S---EFG-----------HDVNRADPVEPGLN 135 (346)
T ss_dssp EEECCCG---------------GGGGGHHHHHHHHHHHC-CCSEEEC-S---CCS-----------SCTTTCCCCTTHHH
T ss_pred EEECCch---------------hhHHHHHHHHHHHHHcC-CceEEee-c---ccC-----------CCCCccCcCCCcch
Confidence 9999764 26777889999999864 2445543 2 232 22444444433344
Q ss_pred cchHHHHHHHHHHh---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHH
Q 042242 176 NFYYVLEDLLKEKL---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSR 252 (303)
Q Consensus 176 ~~~y~~~k~~~e~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (303)
|..+|...+.. .+ ++++++||+.++|....... ... ........+.+.|.+ ....++++++
T Consensus 136 ---y~~sK~~~e~~l~~~g-~~~tivrpg~~~g~~~~~~~---~~~-----~~~~~~~~~~~~g~g----~~~~~~i~~~ 199 (346)
T 3i6i_A 136 ---MYREKRRVRQLVEESG-IPFTYICCNSIASWPYYNNI---HPS-----EVLPPTDFFQIYGDG----NVKAYFVAGT 199 (346)
T ss_dssp ---HHHHHHHHHHHHHHTT-CCBEEEECCEESSCCCSCC-------------CCCCSSCEEEETTS----CCCEEEECHH
T ss_pred ---HHHHHHHHHHHHHHcC-CCEEEEEecccccccCcccc---ccc-----cccCCCceEEEccCC----CceEEecCHH
Confidence 78887777632 24 99999999999995322111 010 000012234444433 4556789999
Q ss_pred HHHHHHHHHhcCcCCcCCCCceEEeec-CCCccHHhhHHHHHHHhcccCC
Q 042242 253 LVAEQHIWVATNDDISSTKGQAFNAIN-GPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 253 d~a~a~~~~~~~~~~~~~~g~~yni~~-~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
|+|+++++++..+...+ ++||+.+ ++.+|+.|+++.+++++|++.+
T Consensus 200 Dva~~~~~~l~~~~~~~---~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 200 DIGKFTMKTVDDVRTLN---KSVHFRPSCNCLNINELASVWEKKIGRTLP 246 (346)
T ss_dssp HHHHHHHHHTTCGGGTT---EEEECCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHhCccccC---eEEEEeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence 99999999998876544 7899985 5799999999999999998865
No 70
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=99.93 E-value=1.7e-25 Score=205.84 Aligned_cols=234 Identities=15% Similarity=0.046 Sum_probs=158.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc-
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS- 106 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~- 106 (303)
+|+|||||||||||++|++.|+ ..||+|++++|++.+. ..+.+|+.+. +.+.++++|.|+|+++.....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~-~~G~~V~~l~R~~~~~-------~~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~~ 216 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQ-TGGHEVIQLVRKEPKP-------GKRFWDPLNP--ASDLLDGADVLVHLAGEPIFGR 216 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESSSCCT-------TCEECCTTSC--CTTTTTTCSEEEECCCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCCCc-------cceeecccch--hHHhcCCCCEEEECCCCccccc
Confidence 5799999999999999999999 6899999999987652 1356777653 456778888899998764322
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
.......+.+++|+.++.++++++... ....+++++|+..+|+... ...++.|+++. |.+. |+..+...
T Consensus 217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~~------~~~~~~E~~~~-~~~~---y~~~~~~~ 285 (516)
T 3oh8_A 217 FNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHDR------GDEILTEESES-GDDF---LAEVCRDW 285 (516)
T ss_dssp CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSEE------EEEEECTTSCC-CSSH---HHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCCC------CCCccCCCCCC-CcCh---HHHHHHHH
Confidence 223334458899999999999984433 2455677777766775211 24567887765 3444 66655544
Q ss_pred H-----H-hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHH
Q 042242 187 E-----K-LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIW 260 (303)
Q Consensus 187 e-----~-~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~ 260 (303)
| . ..+ ++++++||+.|||++.+ . +..+....+ .+.... .+.. .+..++++++|+|++++.
T Consensus 286 E~~~~~~~~~g-i~~~ilRp~~v~Gp~~~----~---~~~~~~~~~-~g~~~~-~g~g----~~~~~~i~v~Dva~ai~~ 351 (516)
T 3oh8_A 286 EHATAPASDAG-KRVAFIRTGVALSGRGG----M---LPLLKTLFS-TGLGGK-FGDG----TSWFSWIAIDDLTDIYYR 351 (516)
T ss_dssp HHTTHHHHHTT-CEEEEEEECEEEBTTBS----H---HHHHHHTTC----CCC-CTTS----CCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHhCC-CCEEEEEeeEEECCCCC----h---HHHHHHHHH-hCCCcc-cCCC----CceEceEeHHHHHHHHHH
Confidence 4 1 224 99999999999996521 1 111111111 122222 2222 566788999999999999
Q ss_pred HhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 261 VATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 261 ~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
++.++... ++||+++++.+|+.|+++.+++.+|++.
T Consensus 352 ~l~~~~~~----g~~ni~~~~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 352 AIVDAQIS----GPINAVAPNPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp HHHCTTCC----EEEEESCSCCEEHHHHHHHTTC------
T ss_pred HHhCcccC----CcEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 99876532 5899999999999999999999999865
No 71
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=99.93 E-value=3.5e-25 Score=197.32 Aligned_cols=226 Identities=12% Similarity=0.031 Sum_probs=163.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCccccc-----------cCCCeEEEEecCCCHHHHHHHHh--c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITAI-----------QSSSYCFISCDLLNPLDIKRKLT--L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~-----------~~~~~~~~~~D~~~~~~l~~~~~--~ 92 (303)
.+|+||||||||+||++|+++|+ ..| ++|++++|++..... ...+++++.+|++|.+.+..+++ +
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~-~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIF-KRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEcCChHHHHHHHHHHH-HCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 36899999999999999999999 678 799999997654320 02578999999999998888774 6
Q ss_pred cCceeEEeecccccCChHH---HHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 93 LEDVTHIFWVTWASQFASD---MHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 93 ~~~V~~~~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
+|.|+|+++..... ...+ ..+.+++|+.++.++++++++.+ ..+++++|+.. +
T Consensus 113 ~D~Vih~Aa~~~~~-~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~g--v~r~V~iSS~~---------------------~ 168 (399)
T 3nzo_A 113 YDYVLNLSALKHVR-SEKDPFTLMRMIDVNVFNTDKTIQQSIDAG--AKKYFCVSTDK---------------------A 168 (399)
T ss_dssp CSEEEECCCCCCGG-GGSSHHHHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEECCSC---------------------S
T ss_pred CCEEEECCCcCCCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeCCC---------------------C
Confidence 67799998765443 2222 24689999999999999999874 34555555311 1
Q ss_pred CCCCCccchHHHHHHHHHH-----hcCCcceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhh
Q 042242 170 RVSKSNNFYYVLEDLLKEK-----LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e~-----~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~ 243 (303)
..|.++ |+.+|...|. ... ++++++||+++||+... .+..+.. +.. +.++...+.
T Consensus 169 ~~p~~~---Yg~sK~~~E~~~~~~~~~-~~~~~vR~g~v~G~~~~-------~i~~~~~~i~~--g~~~~~~gd------ 229 (399)
T 3nzo_A 169 ANPVNM---MGASKRIMEMFLMRKSEE-IAISTARFANVAFSDGS-------LLHGFNQRIQK--NQPIVAPND------ 229 (399)
T ss_dssp SCCCSH---HHHHHHHHHHHHHHHTTT-SEEEEECCCEETTCTTS-------HHHHHHHHHHT--TCCEEEESS------
T ss_pred CCCcCH---HHHHHHHHHHHHHHHhhh-CCEEEeccceeeCCCCc-------hHHHHHHHHHh--CCCEecCCC------
Confidence 123445 8988887772 223 89999999999995421 1111222 222 455555553
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC---ccHHhhHHHHHHHhcccC
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR---FTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~---~s~~e~~~~i~~~~g~~~ 300 (303)
...++++++|+|++++.++.... .|++|++..+++ +|+.|+++.+.+++|+++
T Consensus 230 ~~r~~v~v~D~a~~~~~a~~~~~----~g~i~~l~~g~~~~~~s~~ela~~l~~~~G~~~ 285 (399)
T 3nzo_A 230 IKRYFVTPQESGELCLMSCIFGE----NRDIFFPKLSEALHLISFADIAVKYLKQLGYEP 285 (399)
T ss_dssp CEECEECHHHHHHHHHHHHHHCC----TTEEEEECCCTTCCCEEHHHHHHHHHHHTTCEE
T ss_pred CeeccCCHHHHHHHHHHHhccCC----CCCEEEecCCCCCCcccHHHHHHHHHHHhCCCc
Confidence 33458889999999988887642 348997766655 999999999999999654
No 72
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=99.93 E-value=1.4e-25 Score=185.90 Aligned_cols=218 Identities=12% Similarity=0.132 Sum_probs=152.8
Q ss_pred cCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCe-EEEEecCCCHHHHHHHHhccCceeEE
Q 042242 22 GREVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSY-CFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 22 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~-~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
....+++|+|+||||||+||++++++|+ +.|++|++++|++.+.. ....++ +++.+|++ +.+.+.+.++|.|+|+
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~-~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELK-NKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFA 91 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEEC
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHH-hCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEEC
Confidence 3445568899999999999999999999 68999999999876643 223478 99999999 6778888999989999
Q ss_pred eecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchH
Q 042242 100 FWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYY 179 (303)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y 179 (303)
++.... .. ..+.+++|+.++.++++++++.. ..+++++|+ |+... .+..+ .+..+ |
T Consensus 92 ag~~~~--~~--~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS---~~~~~-----------~~~~~-~~~~~---Y 147 (236)
T 3e8x_A 92 AGSGPH--TG--ADKTILIDLWGAIKTIQEAEKRG--IKRFIMVSS---VGTVD-----------PDQGP-MNMRH---Y 147 (236)
T ss_dssp CCCCTT--SC--HHHHHHTTTHHHHHHHHHHHHHT--CCEEEEECC---TTCSC-----------GGGSC-GGGHH---H
T ss_pred CCCCCC--CC--ccccchhhHHHHHHHHHHHHHcC--CCEEEEEec---CCCCC-----------CCCCh-hhhhh---H
Confidence 775322 22 23378999999999999998763 446666654 21110 11111 11233 8
Q ss_pred HHHHHHHHH-hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHH
Q 042242 180 VLEDLLKEK-LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQ 257 (303)
Q Consensus 180 ~~~k~~~e~-~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a 257 (303)
+.+|...|. .+.. ++++++||+.++|+...... .....+ .....+++++|+|++
T Consensus 148 ~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~~~~------------------~~~~~~------~~~~~~i~~~Dva~~ 203 (236)
T 3e8x_A 148 LVAKRLADDELKRSSLDYTIVRPGPLSNEESTGKV------------------TVSPHF------SEITRSITRHDVAKV 203 (236)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEECSEECSCCCSEE------------------EEESSC------SCCCCCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCcccCCCCCCeE------------------EeccCC------CcccCcEeHHHHHHH
Confidence 888887773 2222 99999999999996332110 001111 234568899999999
Q ss_pred HHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHH
Q 042242 258 HIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGK 294 (303)
Q Consensus 258 ~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~ 294 (303)
++.++..+...+ ++||++++ ..++.|+++.+++
T Consensus 204 ~~~~~~~~~~~g---~~~~v~~~-~~~~~e~~~~i~~ 236 (236)
T 3e8x_A 204 IAELVDQQHTIG---KTFEVLNG-DTPIAKVVEQLGS 236 (236)
T ss_dssp HHHHTTCGGGTT---EEEEEEEC-SEEHHHHHHTC--
T ss_pred HHHHhcCccccC---CeEEEeCC-CcCHHHHHHHhcC
Confidence 999998876444 89999988 5899999987653
No 73
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=99.93 E-value=4.4e-25 Score=188.04 Aligned_cols=212 Identities=16% Similarity=0.185 Sum_probs=150.2
Q ss_pred EEEEEcCCChhHHHHHHHHhhcC--CCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc
Q 042242 30 VAVIFGVTGLVGKELARRLISTA--NWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS 106 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~ 106 (303)
+|||||||||||++++++|+ +. |++|++++|++.+.. ....+++++.+|+.|.+++.++++++|.|+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~-~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~--- 76 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLM-KTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSE--- 76 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHT-TTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred CEEEEcCCchHHHHHHHHHH-hhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC---
Confidence 58999999999999999999 56 899999999876532 223578899999999999999999999999997642
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
...|+.++.+++++|++.+ ..+++++|+...| . . ..+ |+.+|...
T Consensus 77 ---------~~~~~~~~~~l~~a~~~~~--~~~~v~~Ss~~~~-----------~------~----~~~---y~~sK~~~ 121 (286)
T 2zcu_A 77 ---------VGQRAPQHRNVINAAKAAG--VKFIAYTSLLHAD-----------T------S----PLG---LADEHIET 121 (286)
T ss_dssp --------------CHHHHHHHHHHHHT--CCEEEEEEETTTT-----------T------C----CST---THHHHHHH
T ss_pred ---------chHHHHHHHHHHHHHHHcC--CCEEEEECCCCCC-----------C------C----cch---hHHHHHHH
Confidence 1247889999999998763 3455555543232 0 0 123 77777666
Q ss_pred HH---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhc
Q 042242 187 EK---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVAT 263 (303)
Q Consensus 187 e~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~ 263 (303)
|. ..+ ++++++||+.++++.. .++.. .+.. + ++..+. . ....++++++|+|++++.++.
T Consensus 122 e~~~~~~~-~~~~ilrp~~~~~~~~----~~~~~-----~~~~--~-~~~~~~-~----~~~~~~i~~~Dva~~~~~~~~ 183 (286)
T 2zcu_A 122 EKMLADSG-IVYTLLRNGWYSENYL----ASAPA-----ALEH--G-VFIGAA-G----DGKIASATRADYAAAAARVIS 183 (286)
T ss_dssp HHHHHHHC-SEEEEEEECCBHHHHH----TTHHH-----HHHH--T-EEEESC-T----TCCBCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHcC-CCeEEEeChHHhhhhH----HHhHH-----hhcC--C-ceeccC-C----CCccccccHHHHHHHHHHHhc
Confidence 63 234 9999999987665311 11111 1111 2 222332 1 455678999999999999988
Q ss_pred CcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 264 NDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 264 ~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
.+... +++||+++++.+|+.|+++.+++.+|++.+
T Consensus 184 ~~~~~---g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 218 (286)
T 2zcu_A 184 EAGHE---GKVYELAGDSAWTLTQLAAELTKQSGKQVT 218 (286)
T ss_dssp SSSCT---TCEEEECCSSCBCHHHHHHHHHHHHSSCCE
T ss_pred CCCCC---CceEEEeCCCcCCHHHHHHHHHHHHCCCCc
Confidence 76543 489999999999999999999999998753
No 74
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=99.93 E-value=4e-25 Score=188.75 Aligned_cols=219 Identities=15% Similarity=0.151 Sum_probs=152.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
++||||||||+||++++++|++..|++|++++|++.+.. ....+++++.+|+.|++++.++++++|.|+|+++....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-- 78 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-- 78 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS--
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc--
Confidence 369999999999999999998434999999999887643 33468999999999999999999999999999764321
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
...|+.++.+++++|++.+ +.+++++|+ |+.. +..+.. ..+...|. ++.+.
T Consensus 79 --------~~~~~~~~~~l~~aa~~~g--v~~iv~~Ss---~~~~-------------~~~~~~-~~~~~~~~-e~~~~- 129 (289)
T 3e48_A 79 --------SFKRIPEVENLVYAAKQSG--VAHIIFIGY---YADQ-------------HNNPFH-MSPYFGYA-SRLLS- 129 (289)
T ss_dssp --------HHHHHHHHHHHHHHHHHTT--CCEEEEEEE---SCCS-------------TTCCST-THHHHHHH-HHHHH-
T ss_pred --------chhhHHHHHHHHHHHHHcC--CCEEEEEcc---cCCC-------------CCCCCc-cchhHHHH-HHHHH-
Confidence 2347889999999999863 345555553 2111 111111 11111111 22222
Q ss_pred HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCC
Q 042242 188 KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 188 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~ 267 (303)
..+ ++++++||+.++|+ ...+ ...+... +.. ..+. . ....++++++|+|++++.++..+..
T Consensus 130 -~~g-~~~~ilrp~~~~~~----~~~~------~~~~~~~-~~~-~~~~-g----~~~~~~i~~~Dva~~~~~~l~~~~~ 190 (289)
T 3e48_A 130 -TSG-IDYTYVRMAMYMDP----LKPY------LPELMNM-HKL-IYPA-G----DGRINYITRNDIARGVIAIIKNPDT 190 (289)
T ss_dssp -HHC-CEEEEEEECEESTT----HHHH------HHHHHHH-TEE-CCCC-T----TCEEEEECHHHHHHHHHHHHHCGGG
T ss_pred -HcC-CCEEEEeccccccc----cHHH------HHHHHHC-CCE-ecCC-C----CceeeeEEHHHHHHHHHHHHcCCCc
Confidence 225 99999999999983 1111 1111111 211 2222 1 4556789999999999999988765
Q ss_pred cCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 268 SSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 268 ~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
.+ ++||++ ++.+|+.|+++.+++++|++.+
T Consensus 191 ~g---~~~~~~-~~~~s~~e~~~~~~~~~g~~~~ 220 (289)
T 3e48_A 191 WG---KRYLLS-GYSYDMKELAAILSEASGTEIK 220 (289)
T ss_dssp TT---CEEEEC-CEEEEHHHHHHHHHHHHTSCCE
T ss_pred CC---ceEEeC-CCcCCHHHHHHHHHHHHCCcee
Confidence 33 899999 9999999999999999998753
No 75
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=99.93 E-value=3.4e-25 Score=181.60 Aligned_cols=214 Identities=10% Similarity=0.045 Sum_probs=130.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccCC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQF 108 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~~ 108 (303)
|+||||||||+||++++++|+ ..|++|++++|++.+.....++++++.+|+.|.++ +.+.++|.|+|+++....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--- 74 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAK-NRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD--- 74 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT---
T ss_pred CeEEEEcCCchhHHHHHHHHH-hCCCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCCCEEEECCcCCcc---
Confidence 479999999999999999999 67999999999987644223789999999999887 788999999999776321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH-
Q 042242 109 ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE- 187 (303)
Q Consensus 109 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e- 187 (303)
..+.|+.++.++++++++.+ ..+++++|+...|.+.. ...+..|+.+..|... |+..|...+
T Consensus 75 ------~~~~~~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~~~~------~~~~~~~~~~~~~~~~---y~~~k~~~e~ 137 (221)
T 3ew7_A 75 ------EAEKHVTSLDHLISVLNGTV--SPRLLVVGGAASLQIDE------DGNTLLESKGLREAPY---YPTARAQAKQ 137 (221)
T ss_dssp ------TTTSHHHHHHHHHHHHCSCC--SSEEEEECCCC-------------------------CCC---SCCHHHHHHH
T ss_pred ------ccchHHHHHHHHHHHHHhcC--CceEEEEecceEEEcCC------CCccccccCCCCCHHH---HHHHHHHHHH
Confidence 24668999999999999762 34455555433332211 1223455555444444 555444443
Q ss_pred ---Hhc-CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHh
Q 042242 188 ---KLA-GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVA 262 (303)
Q Consensus 188 ---~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~ 262 (303)
... .. ++++++||+.+||+++... .+ . . ...++...+.. ..+++++|+|++++.++
T Consensus 138 ~~~~~~~~~gi~~~ivrp~~v~g~~~~~~-----~~---~-~---~~~~~~~~~~~-------~~~i~~~Dva~~~~~~l 198 (221)
T 3ew7_A 138 LEHLKSHQAEFSWTYISPSAMFEPGERTG-----DY---Q-I---GKDHLLFGSDG-------NSFISMEDYAIAVLDEI 198 (221)
T ss_dssp HHHHHTTTTTSCEEEEECSSCCCCC----------------------------------------CCCHHHHHHHHHHHH
T ss_pred HHHHHhhccCccEEEEeCcceecCCCccC-----ce---E-e---ccccceecCCC-------CceEeHHHHHHHHHHHH
Confidence 221 23 9999999999999633211 10 0 0 01122222221 13778899999999999
Q ss_pred cCcCCcCCCCceEEeecCCCccHHh
Q 042242 263 TNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 263 ~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
.++...+ ++||++++...+..|
T Consensus 199 ~~~~~~g---~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 199 ERPNHLN---EHFTVAGKLEHHHHH 220 (221)
T ss_dssp HSCSCTT---SEEECCC--------
T ss_pred hCccccC---CEEEECCCCcccccc
Confidence 9987655 999999998877665
No 76
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=99.93 E-value=1.1e-24 Score=178.89 Aligned_cols=215 Identities=12% Similarity=0.070 Sum_probs=146.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
|+||||||||+||++|+++|+ +.|++|++++|++.+.. ....+++++.+|+.|.++ +.+.++|.|+|+++..+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~ 77 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEAR-RRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSG 77 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSS
T ss_pred CEEEEEcCCCHHHHHHHHHHH-HCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcc
Confidence 479999999999999999999 67999999999876543 234689999999999887 78899999999987653221
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccc-cccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKH-YVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~-y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
..+.|+.++.++++++++.+ .+++++|+... |..... ...+..+.....|..+ |+.+|...
T Consensus 78 -------~~~~n~~~~~~l~~a~~~~~---~~~v~~SS~~~~~~~~~~-----~~~~~~~~~~~~~~~~---y~~sK~~~ 139 (224)
T 3h2s_A 78 -------RGYLHLDFATHLVSLLRNSD---TLAVFILGSASLAMPGAD-----HPMILDFPESAASQPW---YDGALYQY 139 (224)
T ss_dssp -------CTHHHHHHHHHHHHTCTTCC---CEEEEECCGGGSBCTTCS-----SCGGGGCCGGGGGSTT---HHHHHHHH
T ss_pred -------hhhHHHHHHHHHHHHHHHcC---CcEEEEecceeeccCCCC-----ccccccCCCCCccchh---hHHHHHHH
Confidence 24679999999999999875 45555554323 322211 0112333322222334 88888777
Q ss_pred HHh----cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 187 EKL----AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 187 e~~----~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
|.. ... ++++++||+.+||++.... +... ...+..+ .....+++++|+|++++.+
T Consensus 140 e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~-----------~~~~~~~-------~~~~~~i~~~DvA~~~~~~ 199 (224)
T 3h2s_A 140 YEYQFLQMNANVNWIGISPSEAFPSGPATS--YVAG-----------KDTLLVG-------EDGQSHITTGNMALAILDQ 199 (224)
T ss_dssp HHHHHHTTCTTSCEEEEEECSBCCCCCCCC--EEEE-----------SSBCCCC-------TTSCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcEEEEcCccccCCCcccC--ceec-----------ccccccC-------CCCCceEeHHHHHHHHHHH
Confidence 632 233 9999999999999743322 1000 1111221 2334688999999999999
Q ss_pred hcCcCCcCCCCceEEeecCCCccHHh
Q 042242 262 ATNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 262 ~~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
+.++...+ ++|++++.+..++.+
T Consensus 200 l~~~~~~g---~~~~~~~~~~~~~~~ 222 (224)
T 3h2s_A 200 LEHPTAIR---DRIVVRDADLEHHHH 222 (224)
T ss_dssp HHSCCCTT---SEEEEEECC------
T ss_pred hcCccccC---CEEEEecCcchhccc
Confidence 99987655 899999988766544
No 77
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=99.91 E-value=4.7e-24 Score=183.00 Aligned_cols=225 Identities=16% Similarity=0.033 Sum_probs=155.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVT 103 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~ 103 (303)
+|+|+||||||+||++++++|+ +.| ++|++++|++.+.. ....+++++.+|+.|.+++.++++++|.|+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 83 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLL-EDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYW 83 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-hcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCC
Confidence 4799999999999999999999 456 99999999876531 223578999999999999999999999899986531
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHH
Q 042242 104 WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLED 183 (303)
Q Consensus 104 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k 183 (303)
.. . ..+.|+.++.++++++++.+ ..++++.|+...|... +.. +..+ |..+|
T Consensus 84 ~~----~----~~~~~~~~~~~~~~aa~~~g--v~~iv~~S~~~~~~~~-------------~~~---~~~~---y~~sK 134 (299)
T 2wm3_A 84 ES----C----SQEQEVKQGKLLADLARRLG--LHYVVYSGLENIKKLT-------------AGR---LAAA---HFDGK 134 (299)
T ss_dssp HH----T----CHHHHHHHHHHHHHHHHHHT--CSEEEECCCCCHHHHT-------------TTS---CCCH---HHHHH
T ss_pred cc----c----cchHHHHHHHHHHHHHHHcC--CCEEEEEcCccccccC-------------CCc---ccCc---hhhHH
Confidence 10 0 13567889999999998763 4466665443333211 111 1233 66666
Q ss_pred HHHHHh---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc--eeeCCchhhhhhhcccCccHHHHHHHH
Q 042242 184 LLKEKL---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP--FVFGGTREIWEEYCLDGSDSRLVAEQH 258 (303)
Q Consensus 184 ~~~e~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~a~a~ 258 (303)
...|.. .+ ++++++||+.+||+.... +... ....+.. +..+. . ....++++++|+|+++
T Consensus 135 ~~~e~~~~~~g-i~~~ilrp~~~~~~~~~~---~~~~-------~~~~g~~~~~~~~~-~----~~~~~~i~~~Dva~~~ 198 (299)
T 2wm3_A 135 GEVEEYFRDIG-VPMTSVRLPCYFENLLSH---FLPQ-------KAPDGKSYLLSLPT-G----DVPMDGMSVSDLGPVV 198 (299)
T ss_dssp HHHHHHHHHHT-CCEEEEECCEEGGGGGTT---TCCE-------ECTTSSSEEECCCC-T----TSCEEEECGGGHHHHH
T ss_pred HHHHHHHHHCC-CCEEEEeecHHhhhchhh---cCCc-------ccCCCCEEEEEecC-C----CCccceecHHHHHHHH
Confidence 665522 25 999999999999942211 0000 0001221 12221 1 4455678889999999
Q ss_pred HHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 259 IWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 259 ~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+.++..+.. ..|++||+++ +.+|+.|+++.+++++|++.+
T Consensus 199 ~~~l~~~~~--~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~ 238 (299)
T 2wm3_A 199 LSLLKMPEK--YVGQNIGLST-CRHTAEEYAALLTKHTRKVVH 238 (299)
T ss_dssp HHHHHSHHH--HTTCEEECCS-EEECHHHHHHHHHHHHSSCEE
T ss_pred HHHHcChhh--hCCeEEEeee-ccCCHHHHHHHHHHHHCCCce
Confidence 998876532 1247999987 579999999999999998753
No 78
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=99.90 E-value=3.3e-24 Score=189.32 Aligned_cols=210 Identities=16% Similarity=0.131 Sum_probs=150.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
|+|||||||||||++|+++|+ +.|+ +|++++|+ .|.+++.++++++|.|+|+++.....
T Consensus 1 M~VlVtGatG~iG~~l~~~L~-~~g~~~v~~~d~~------------------~d~~~l~~~~~~~d~Vih~a~~~~~~- 60 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLT-STTDHHIFEVHRQ------------------TKEEELESALLKADFIVHLAGVNRPE- 60 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HHCCCEEEECCTT------------------CCHHHHHHHHHHCSEEEECCCSBCTT-
T ss_pred CEEEEECCCCHHHHHHHHHHH-hCCCCEEEEECCC------------------CCHHHHHHHhccCCEEEECCcCCCCC-
Confidence 489999999999999999999 5677 66665553 77889999999999999998754322
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
++.+.++.|+.++.+++++|++.+.+ .+++++|+..+|+ .++ |+.+|...|
T Consensus 61 ---~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~v~~Ss~~~~~----------------------~~~---Y~~sK~~~E 111 (369)
T 3st7_A 61 ---HDKEFSLGNVSYLDHVLDILTRNTKK-PAILLSSSIQATQ----------------------DNP---YGESKLQGE 111 (369)
T ss_dssp ---CSTTCSSSCCBHHHHHHHHHTTCSSC-CEEEEEEEGGGGS----------------------CSH---HHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEeCchhhcC----------------------CCC---chHHHHHHH
Confidence 12226788999999999999987422 1555555544441 223 777776665
Q ss_pred -----Hh--cCCcceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHH
Q 042242 188 -----KL--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHI 259 (303)
Q Consensus 188 -----~~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~ 259 (303)
+. .+ ++++++||+++||++.....+. .+..+.. +.. +.++.+.+ . ....++++++|+|++++
T Consensus 112 ~~~~~~~~~~g-~~~~i~R~~~v~G~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~-~----~~~~~~i~v~Dva~~~~ 181 (369)
T 3st7_A 112 QLLREYAEEYG-NTVYIYRWPNLFGKWCKPNYNS--VIATFCYKIAR--NEEIQVND-R----NVELTLNYVDDIVAEIK 181 (369)
T ss_dssp HHHHHHHHHHC-CCEEEEEECEEECTTCCTTSSC--HHHHHHHHHHT--TCCCCCSC-T----TCEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCEEEEECCceeCCCCCCCcch--HHHHHHHHHHc--CCCeEecC-C----CeEEEEEEHHHHHHHHH
Confidence 22 24 9999999999999754322211 1222222 222 33433331 1 55678999999999999
Q ss_pred HHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 260 WVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 260 ~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
.++..+... .+++||+++++.+|+.|+++.+++.+|.+
T Consensus 182 ~~l~~~~~~--~~~~~~i~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 182 RAIEGTPTI--ENGVPTVPNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp HHHHTCCCE--ETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred HHHhCCccc--CCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 999887653 13899999999999999999999999876
No 79
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.90 E-value=7.2e-24 Score=172.96 Aligned_cols=205 Identities=15% Similarity=0.099 Sum_probs=145.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~ 104 (303)
|+++|+||||||+||++++++|+ +.|+ +|++++|++.+ ..++++++.+|+.|.+++.+++ +|.|+|+++...
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~-~~g~~~~V~~~~r~~~~---~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRIL-SEPTLAKVIAPARKALA---EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHH-HCTTCCEEECCBSSCCC---CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHH-hCCCCCeEEEEeCCCcc---cCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 56899999999999999999999 5777 99999998765 3467888899999988887777 788999976543
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
.. ..+..+.+++|+.++.++++++++.. ..+++++|+...|.. |..+ |+.+|.
T Consensus 78 ~~--~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~--------------------~~~~---y~~sK~ 130 (215)
T 2a35_A 78 KE--AGSEEAFRAVDFDLPLAVGKRALEMG--ARHYLVVSALGADAK--------------------SSIF---YNRVKG 130 (215)
T ss_dssp HH--HSSHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCCTT--------------------CSSH---HHHHHH
T ss_pred cc--CCCHHHHHHhhHHHHHHHHHHHHHcC--CCEEEEECCcccCCC--------------------CccH---HHHHHH
Confidence 22 12233478999999999999998763 446666665434311 1334 899988
Q ss_pred HHHHh-cCC-cc-eEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 185 LKEKL-AGK-VA-WSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 185 ~~e~~-~~~-~~-~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
..|.. ... ++ ++++||+.+||+... ..+...+ .. ...+ ..++ ..++++++|+|++++.+
T Consensus 131 ~~e~~~~~~~~~~~~~vrp~~v~g~~~~--~~~~~~~------~~-~~~~-~~~~--------~~~~i~~~Dva~~~~~~ 192 (215)
T 2a35_A 131 ELEQALQEQGWPQLTIARPSLLFGPREE--FRLAEIL------AA-PIAR-ILPG--------KYHGIEACDLARALWRL 192 (215)
T ss_dssp HHHHHHTTSCCSEEEEEECCSEESTTSC--EEGGGGT------TC-CCC-----C--------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEEeCceeeCCCCc--chHHHHH------HH-hhhh-ccCC--------CcCcEeHHHHHHHHHHH
Confidence 88843 222 88 999999999996433 1111111 00 0112 1122 22478899999999999
Q ss_pred hcCcCCcCCCCceEEeecCCCccHHh
Q 042242 262 ATNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 262 ~~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
+..+. + ++||+++++.+++.+
T Consensus 193 ~~~~~--~---~~~~i~~~~~~~~~~ 213 (215)
T 2a35_A 193 ALEEG--K---GVRFVESDELRKLGK 213 (215)
T ss_dssp HTCCC--S---EEEEEEHHHHHHHHH
T ss_pred HhcCC--C---CceEEcHHHHHHhhc
Confidence 98764 3 799999987766543
No 80
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=99.89 E-value=4e-22 Score=161.39 Aligned_cols=199 Identities=13% Similarity=0.108 Sum_probs=140.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccccc-CCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQ-SSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS 106 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~ 106 (303)
+|+|+||||||+||++++++|+ +.|++|++++|++.+.... ..+++++.+|+.|.+++.++++++|.|+|+++....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~- 80 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAV-QAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND- 80 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC-
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC-
Confidence 3799999999999999999999 5789999999987654322 467899999999999999999999989999765332
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
. + ..+.|+.++.++++++++.. ..+++++|+...|+... .. +. +..+ |..+|...
T Consensus 81 ~---~---~~~~n~~~~~~~~~~~~~~~--~~~~v~~Ss~~~~~~~~-------~~------~~-~~~~---y~~~K~~~ 135 (206)
T 1hdo_A 81 L---S---PTTVMSEGARNIVAAMKAHG--VDKVVACTSAFLLWDPT-------KV------PP-RLQA---VTDDHIRM 135 (206)
T ss_dssp C---S---CCCHHHHHHHHHHHHHHHHT--CCEEEEECCGGGTSCTT-------CS------CG-GGHH---HHHHHHHH
T ss_pred C---C---ccchHHHHHHHHHHHHHHhC--CCeEEEEeeeeeccCcc-------cc------cc-cchh---HHHHHHHH
Confidence 1 1 13578999999999998763 45666666655553221 00 00 1233 88888776
Q ss_pred HH---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhc
Q 042242 187 EK---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVAT 263 (303)
Q Consensus 187 e~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~ 263 (303)
|. ..+ ++++++||+.+ ++++... .+.. ...+.. . ..+++++|+|++++.++.
T Consensus 136 e~~~~~~~-i~~~~lrp~~~-~~~~~~~-~~~~----------------~~~~~~----~--~~~i~~~Dva~~~~~~~~ 190 (206)
T 1hdo_A 136 HKVLRESG-LKYVAVMPPHI-GDQPLTG-AYTV----------------TLDGRG----P--SRVISKHDLGHFMLRCLT 190 (206)
T ss_dssp HHHHHHTC-SEEEEECCSEE-ECCCCCS-CCEE----------------ESSSCS----S--CSEEEHHHHHHHHHHTTS
T ss_pred HHHHHhCC-CCEEEEeCCcc-cCCCCCc-ceEe----------------cccCCC----C--CCccCHHHHHHHHHHHhc
Confidence 63 234 99999999997 4322211 0000 001100 0 247899999999999998
Q ss_pred CcCCcCCCCceEEeecCC
Q 042242 264 NDDISSTKGQAFNAINGP 281 (303)
Q Consensus 264 ~~~~~~~~g~~yni~~~~ 281 (303)
++... |++||+++++
T Consensus 191 ~~~~~---g~~~~i~~g~ 205 (206)
T 1hdo_A 191 TDEYD---GHSTYPSHQY 205 (206)
T ss_dssp CSTTT---TCEEEEECCC
T ss_pred Ccccc---ccceeeeccc
Confidence 87544 4899999875
No 81
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=99.89 E-value=1e-22 Score=175.64 Aligned_cols=229 Identities=13% Similarity=0.070 Sum_probs=153.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-----c----ccCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-----A----IQSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----~----~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
+++|+||||||+||++++++|+ +.|++|++++|++... . ....+++++.+|+.|.+++.++++++|.|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 82 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASI-SLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 82 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-hCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence 3689999999999999999999 5789999999986421 0 1246899999999999999999999999999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
+++..... .|+.++.+++++|++.+ ++.++++ | .|+... .. . +.+..|. ...
T Consensus 83 ~a~~~~~~-----------~~~~~~~~l~~aa~~~g-~v~~~v~-S---~~g~~~-------~~-~--~~~~~p~--~~~ 134 (313)
T 1qyd_A 83 ALAGGVLS-----------HHILEQLKLVEAIKEAG-NIKRFLP-S---EFGMDP-------DI-M--EHALQPG--SIT 134 (313)
T ss_dssp CCCCSSSS-----------TTTTTHHHHHHHHHHSC-CCSEEEC-S---CCSSCT-------TS-C--CCCCSST--THH
T ss_pred CCccccch-----------hhHHHHHHHHHHHHhcC-CCceEEe-c---CCcCCc-------cc-c--ccCCCCC--cch
Confidence 97643221 25667788999998763 2445553 2 332211 10 0 1121211 223
Q ss_pred HHHHHHHHHH---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHH
Q 042242 179 YVLEDLLKEK---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVA 255 (303)
Q Consensus 179 y~~~k~~~e~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a 255 (303)
| .+|...|. ..+ ++++++||+.++|............ ....+..+...+.. ....++++++|+|
T Consensus 135 y-~sK~~~e~~~~~~g-~~~~ilrp~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g----~~~~~~i~~~Dva 201 (313)
T 1qyd_A 135 F-IDKRKVRRAIEAAS-IPYTYVSSNMFAGYFAGSLAQLDGH-------MMPPRDKVLIYGDG----NVKGIWVDEDDVG 201 (313)
T ss_dssp H-HHHHHHHHHHHHTT-CCBCEEECCEEHHHHTTTSSCTTCC-------SSCCSSEECCBTTS----CSEEEEECHHHHH
T ss_pred H-HHHHHHHHHHHhcC-CCeEEEEeceecccccccccccccc-------ccCCCCeEEEeCCC----CceEEEEEHHHHH
Confidence 6 66666552 224 9999999999988422111000000 00011222233322 4556788999999
Q ss_pred HHHHHHhcCcCCcCCCCceEEeecC-CCccHHhhHHHHHHHhcccCC
Q 042242 256 EQHIWVATNDDISSTKGQAFNAING-PRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 256 ~a~~~~~~~~~~~~~~g~~yni~~~-~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++++.++..+...+ +.|++.++ +.+|+.|+++.+++++|++.+
T Consensus 202 ~~~~~~l~~~~~~~---~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 245 (313)
T 1qyd_A 202 TYTIKSIDDPQTLN---KTMYIRPPMNILSQKEVIQIWERLSEQNLD 245 (313)
T ss_dssp HHHHHHTTCGGGSS---SEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred HHHHHHHhCcccCC---ceEEEeCCCCccCHHHHHHHHHHhcCCCCc
Confidence 99999988775433 77888764 789999999999999998754
No 82
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=99.89 E-value=1.2e-22 Score=174.84 Aligned_cols=223 Identities=11% Similarity=0.073 Sum_probs=150.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc----------cccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT----------AIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----------~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
+++|+||||||+||++++++|+ +.|++|++++|++... .+...+++++.+|+.|.+++.++++++|.||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 82 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASL-DLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 82 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-hCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence 4689999999999999999999 5789999999986432 0124689999999999999999999999999
Q ss_pred EEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccc
Q 042242 98 HIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNF 177 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~ 177 (303)
|+++... +.++.+++++|++.+ ++.++++ | .|+.. ..+..+..|. ..
T Consensus 83 ~~a~~~~---------------~~~~~~l~~aa~~~g-~v~~~v~-S---~~g~~-----------~~~~~~~~p~--~~ 129 (308)
T 1qyc_A 83 STVGSLQ---------------IESQVNIIKAIKEVG-TVKRFFP-S---EFGND-----------VDNVHAVEPA--KS 129 (308)
T ss_dssp ECCCGGG---------------SGGGHHHHHHHHHHC-CCSEEEC-S---CCSSC-----------TTSCCCCTTH--HH
T ss_pred ECCcchh---------------hhhHHHHHHHHHhcC-CCceEee-c---ccccC-----------ccccccCCcc--hh
Confidence 9976421 234567899988763 2445542 2 23211 1222222211 22
Q ss_pred hHHHHHHHHHH---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHH
Q 042242 178 YYVLEDLLKEK---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLV 254 (303)
Q Consensus 178 ~y~~~k~~~e~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (303)
.| .+|...+. ..+ ++++++||+.++|............ . .....+...+.. ....++++++|+
T Consensus 130 ~y-~sK~~~e~~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~----~~~~~~i~~~Dv 195 (308)
T 1qyc_A 130 VF-EVKAKVRRAIEAEG-IPYTYVSSNCFAGYFLRSLAQAGLT------A--PPRDKVVILGDG----NARVVFVKEEDI 195 (308)
T ss_dssp HH-HHHHHHHHHHHHHT-CCBEEEECCEEHHHHTTTTTCTTCS------S--CCSSEEEEETTS----CCEEEEECHHHH
T ss_pred HH-HHHHHHHHHHHhcC-CCeEEEEeceecccccccccccccc------C--CCCCceEEecCC----CceEEEecHHHH
Confidence 36 66665552 124 9999999999998422111110000 0 012233333332 445678899999
Q ss_pred HHHHHHHhcCcCCcCCCCceEEeecC-CCccHHhhHHHHHHHhcccCC
Q 042242 255 AEQHIWVATNDDISSTKGQAFNAING-PRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 255 a~a~~~~~~~~~~~~~~g~~yni~~~-~~~s~~e~~~~i~~~~g~~~~ 301 (303)
|++++.++.++...+ +.|++.++ +.+|+.|+++.+++++|++.+
T Consensus 196 a~~~~~~l~~~~~~~---~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 240 (308)
T 1qyc_A 196 GTFTIKAVDDPRTLN---KTLYLRLPANTLSLNELVALWEKKIDKTLE 240 (308)
T ss_dssp HHHHHTTSSCGGGTT---EEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHhCccccC---eEEEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence 999999887765433 78888764 689999999999999998764
No 83
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=99.88 E-value=5.6e-23 Score=177.82 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=149.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
|+++|+||||||+||++++++|+ +.|++|++++|++.... ....+++++.+|+.|.+++.++++++|.|+|+++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSL-KLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHH-HTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCCeEEEECCCchHHHHHHHHHH-HCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 45689999999999999999999 57899999999875211 1235799999999999999999999999999976
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc-cchHH
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN-NFYYV 180 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~-~~~y~ 180 (303)
... +.++.++++++++.+ .+.++++ | .|+.. ..+..+ ..| ...|
T Consensus 89 ~~~---------------~~~~~~l~~aa~~~g-~v~~~v~-S---~~g~~-----------~~~~~~---~~p~~~~y- 133 (318)
T 2r6j_A 89 FPQ---------------ILDQFKILEAIKVAG-NIKRFLP-S---DFGVE-----------EDRINA---LPPFEALI- 133 (318)
T ss_dssp GGG---------------STTHHHHHHHHHHHC-CCCEEEC-S---CCSSC-----------TTTCCC---CHHHHHHH-
T ss_pred hhh---------------hHHHHHHHHHHHhcC-CCCEEEe-e---ccccC-----------cccccC---CCCcchhH-
Confidence 421 334577899988763 1345543 2 23211 122222 122 2236
Q ss_pred HHHHHHHH---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHH
Q 042242 181 LEDLLKEK---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQ 257 (303)
Q Consensus 181 ~~k~~~e~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a 257 (303)
.+|...+. ..+ ++++++||+.+++. . ...+ .... ....++...+.. ....++++++|+|++
T Consensus 134 ~sK~~~e~~~~~~~-~~~~~lr~~~~~~~----~---~~~~---~~~~-~~~~~~~~~~~~----~~~~~~i~~~Dva~~ 197 (318)
T 2r6j_A 134 ERKRMIRRAIEEAN-IPYTYVSANCFASY----F---INYL---LRPY-DPKDEITVYGTG----EAKFAMNYEQDIGLY 197 (318)
T ss_dssp HHHHHHHHHHHHTT-CCBEEEECCEEHHH----H---HHHH---HCTT-CCCSEEEEETTS----CCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCeEEEEcceehhh----h---hhhh---cccc-CCCCceEEecCC----CceeeEeeHHHHHHH
Confidence 56655552 224 99999999888762 1 0110 0000 012233333332 445678899999999
Q ss_pred HHHHhcCcCCcCCCCceEEeec-CCCccHHhhHHHHHHHhcccCC
Q 042242 258 HIWVATNDDISSTKGQAFNAIN-GPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 258 ~~~~~~~~~~~~~~g~~yni~~-~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++.++..+...+ +.|++.+ ++.+|+.|+++.+++++|++.+
T Consensus 198 ~~~~l~~~~~~~---~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 239 (318)
T 2r6j_A 198 TIKVATDPRALN---RVVIYRPSTNIITQLELISRWEKKIGKKFK 239 (318)
T ss_dssp HHHHTTCGGGTT---EEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred HHHHhcCccccC---eEEEecCCCCccCHHHHHHHHHHHhCCCCc
Confidence 999988765433 7788875 4789999999999999998764
No 84
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=99.88 E-value=3.3e-22 Score=171.98 Aligned_cols=223 Identities=16% Similarity=0.097 Sum_probs=148.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC-------cccc----ccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP-------EITA----IQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~-------~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
+++|+||||||+||++|+++|+ +.|++|++++|++ .+.. ....+++++.+|+.|.+++.++++++|.|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 80 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASI-KAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcEEEEECCCchHHHHHHHHHH-hCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence 4689999999999999999999 5789999999986 1111 12357899999999999999999999999
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCcc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNN 176 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~ 176 (303)
+|+++... +.++.++++++++.+ .+.++++ | .|+.. ..+..+..|. .
T Consensus 81 i~~a~~~~---------------~~~~~~l~~aa~~~g-~v~~~v~-S---~~g~~-----------~~~~~~~~p~--~ 127 (307)
T 2gas_A 81 ICAAGRLL---------------IEDQVKIIKAIKEAG-NVKKFFP-S---EFGLD-----------VDRHDAVEPV--R 127 (307)
T ss_dssp EECSSSSC---------------GGGHHHHHHHHHHHC-CCSEEEC-S---CCSSC-----------TTSCCCCTTH--H
T ss_pred EECCcccc---------------cccHHHHHHHHHhcC-CceEEee-c---ccccC-----------cccccCCCcc--h
Confidence 99976421 234567888888753 1445542 2 33211 1222222211 2
Q ss_pred chHHHHHHHHHH---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHH
Q 042242 177 FYYVLEDLLKEK---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRL 253 (303)
Q Consensus 177 ~~y~~~k~~~e~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 253 (303)
..| .+|...+. ..+ ++++++||+.+++.......... ........+...+.. ....++++++|
T Consensus 128 ~~y-~sK~~~e~~~~~~~-i~~~~lrp~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~i~~~D 193 (307)
T 2gas_A 128 QVF-EEKASIRRVIEAEG-VPYTYLCCHAFTGYFLRNLAQLD--------ATDPPRDKVVILGDG----NVKGAYVTEAD 193 (307)
T ss_dssp HHH-HHHHHHHHHHHHHT-CCBEEEECCEETTTTGGGTTCTT--------CSSCCSSEEEEETTS----CSEEEEECHHH
T ss_pred hHH-HHHHHHHHHHHHcC-CCeEEEEcceeeccccccccccc--------cccCCCCeEEEecCC----CcceEEeeHHH
Confidence 236 66665552 224 99999999998873211100000 000011223333322 34567889999
Q ss_pred HHHHHHHHhcCcCCcCCCCceEEeecC-CCccHHhhHHHHHHHhcccCC
Q 042242 254 VAEQHIWVATNDDISSTKGQAFNAING-PRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 254 ~a~a~~~~~~~~~~~~~~g~~yni~~~-~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+|++++.++..+...+ +.|++.++ +.+|+.|+++.+++.+|++.+
T Consensus 194 va~~~~~~l~~~~~~~---~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 239 (307)
T 2gas_A 194 VGTFTIRAANDPNTLN---KAVHIRLPKNYLTQNEVIALWEKKIGKTLE 239 (307)
T ss_dssp HHHHHHHHHTCGGGTT---EEEECCCGGGEEEHHHHHHHHHHHHTSCCE
T ss_pred HHHHHHHHHcCccccC---ceEEEeCCCCcCCHHHHHHHHHHHhCCCCc
Confidence 9999999988765433 77888764 689999999999999998754
No 85
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=99.88 E-value=1.3e-22 Score=175.76 Aligned_cols=221 Identities=14% Similarity=0.067 Sum_probs=149.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC-cc-----cc----ccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP-EI-----TA----IQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~-----~~----~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
++++|+||||||+||++++++|+ +.|++|++++|++ .. .. ....+++++.+|+.|.+++.++++++|.|
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~v 81 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASL-SFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIV 81 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHH-HTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cccEEEEEcCCchhHHHHHHHHH-hCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence 34689999999999999999999 5789999999986 21 10 12357999999999999999999999999
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc-
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN- 175 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~- 175 (303)
+|+++... +.++.+++++|++.+ .+.++++ | .|+.. ..|..+. .|
T Consensus 82 i~~a~~~~---------------~~~~~~l~~aa~~~g-~v~~~v~-S---~~g~~-----------~~~~~~~---~p~ 127 (321)
T 3c1o_A 82 ISALPFPM---------------ISSQIHIINAIKAAG-NIKRFLP-S---DFGCE-----------EDRIKPL---PPF 127 (321)
T ss_dssp EECCCGGG---------------SGGGHHHHHHHHHHC-CCCEEEC-S---CCSSC-----------GGGCCCC---HHH
T ss_pred EECCCccc---------------hhhHHHHHHHHHHhC-CccEEec-c---ccccC-----------ccccccC---CCc
Confidence 99976421 344567899988763 1345442 2 33211 1222221 12
Q ss_pred cchHHHHHHHHHH---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHH--hhhCCCceeeCCchhhhhhhcccCcc
Q 042242 176 NFYYVLEDLLKEK---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAV--CKHLNLPFVFGGTREIWEEYCLDGSD 250 (303)
Q Consensus 176 ~~~y~~~k~~~e~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (303)
...| .+|...|. ..+ ++++++||+.+++... .. +... ....+..+...+.. ....++++
T Consensus 128 ~~~y-~sK~~~e~~~~~~~-~~~~~lrp~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~i~ 191 (321)
T 3c1o_A 128 ESVL-EKKRIIRRAIEAAA-LPYTYVSANCFGAYFV-------NY---LLHPSPHPNRNDDIVIYGTG----ETKFVLNY 191 (321)
T ss_dssp HHHH-HHHHHHHHHHHHHT-CCBEEEECCEEHHHHH-------HH---HHCCCSSCCTTSCEEEETTS----CCEEEEEC
T ss_pred chHH-HHHHHHHHHHHHcC-CCeEEEEeceeccccc-------cc---cccccccccccCceEEecCC----CcceeEee
Confidence 2236 66665552 224 9999999999887310 01 0000 00012223333322 44567889
Q ss_pred HHHHHHHHHHHhcCcCCcCCCCceEEeec-CCCccHHhhHHHHHHHhcccCC
Q 042242 251 SRLVAEQHIWVATNDDISSTKGQAFNAIN-GPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 251 ~~d~a~a~~~~~~~~~~~~~~g~~yni~~-~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++|+|++++.++..+...+ +.|++.+ ++.+|+.|+++.+++.+|++.+
T Consensus 192 ~~Dva~~~~~~l~~~~~~g---~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 192 EEDIAKYTIKVACDPRCCN---RIVIYRPPKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp HHHHHHHHHHHHHCGGGTT---EEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHhCccccC---eEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence 9999999999988765433 7888876 4789999999999999998864
No 86
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=99.88 E-value=6.2e-22 Score=173.49 Aligned_cols=227 Identities=11% Similarity=0.017 Sum_probs=151.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc--c-c-cCCCeEEEEec-CCCHHHHHHHHhccCceeEEeec
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT--A-I-QSSSYCFISCD-LLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~-~-~~~~~~~~~~D-~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
+++|+||||||+||++|+++|+ ..|++|++++|++++. . . ...+++++.+| ++|.+++.++++++|.|+|++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAA-AVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 5789999999999999999999 5799999999987653 1 1 12478999999 99999999999999988887543
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHH
Q 042242 103 TWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLE 182 (303)
Q Consensus 103 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~ 182 (303)
. . .+.|..+ .++++++++.+ ++.+++++|+... ..+ .+ .+..+ |..+
T Consensus 84 ~--~---------~~~~~~~-~~l~~aa~~~g-~v~~~V~~SS~~~-----~~~--------~~----~~~~~---y~~s 130 (352)
T 1xgk_A 84 Q--A---------GDEIAIG-KDLADAAKRAG-TIQHYIYSSMPDH-----SLY--------GP----WPAVP---MWAP 130 (352)
T ss_dssp T--T---------SCHHHHH-HHHHHHHHHHS-CCSEEEEEECCCG-----GGT--------SS----CCCCT---TTHH
T ss_pred C--C---------cHHHHHH-HHHHHHHHHcC-CccEEEEeCCccc-----ccc--------CC----CCCcc---HHHH
Confidence 1 1 1235556 88999998764 1345555544210 001 00 11234 6777
Q ss_pred HHHHHHh-cCC-cceEEecCCceeecCCCCc-cchhhHHHHHHHHhhhCCCc-eeeCCchhhhhhhcccCccH-HHHHHH
Q 042242 183 DLLKEKL-AGK-VAWSVHRPGLLLGSSHRSL-YNFLGCLCVYGAVCKHLNLP-FVFGGTREIWEEYCLDGSDS-RLVAEQ 257 (303)
Q Consensus 183 k~~~e~~-~~~-~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~-~d~a~a 257 (303)
|...|.. ... ++++++||+ +||++.... ..++.. .....+.. +..++.. ....+++++ +|+|++
T Consensus 131 K~~~E~~~~~~gi~~~ivrpg-~~g~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~----~~~~~~i~v~~Dva~a 199 (352)
T 1xgk_A 131 KFTVENYVRQLGLPSTFVYAG-IYNNNFTSLPYPLFQM------ELMPDGTFEWHAPFDP----DIPLPWLDAEHDVGPA 199 (352)
T ss_dssp HHHHHHHHHTSSSCEEEEEEC-EEGGGCBSSSCSSCBE------EECTTSCEEEEESSCT----TSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecc-eecCCchhcccccccc------cccCCCceEEeeccCC----CCceeeEecHHHHHHH
Confidence 7777632 222 999999976 688543211 011000 00011322 1234332 455678898 899999
Q ss_pred HHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 258 HIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 258 ~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++.++..+... ..+++||+++ +.+|+.|+++.+++.+|++.+
T Consensus 200 i~~~l~~~~~~-~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~ 241 (352)
T 1xgk_A 200 LLQIFKDGPQK-WNGHRIALTF-ETLSPVQVCAAFSRALNRRVT 241 (352)
T ss_dssp HHHHHHHCHHH-HTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred HHHHHhCCchh-hCCeEEEEec-CCCCHHHHHHHHHHHHCCCCc
Confidence 99988764210 1248999995 679999999999999998753
No 87
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=99.86 E-value=8.1e-21 Score=161.04 Aligned_cols=233 Identities=12% Similarity=0.055 Sum_probs=156.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|++|.++++++++ .
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 92 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFV-RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK 92 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999 68999999999764321 1 11268899999999999988887 5
Q ss_pred cCceeEEeeccc------ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 LEDVTHIFWVTW------ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 ~~~V~~~~~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.|+|.++... ...+..+..+.+++|+.++.++++++.... .+..+++.+++...|... +
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~- 161 (278)
T 2bgk_A 93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG----------E- 161 (278)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC----------T-
T ss_pred CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC----------C-
Confidence 677888876432 122334555689999999999999887651 234566666654444211 0
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+..+ |+.+|...+ +. .+ ++++++||+.++++............ ...+... .+
T Consensus 162 ------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~--~~--- 224 (278)
T 2bgk_A 162 ------GVSHV---YTATKHAVLGLTTSLCTELGEYG-IRVNCVSPYIVASPLLTDVFGVDSSR--VEELAHQ--AA--- 224 (278)
T ss_dssp ------TSCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESCCSCCCCTTSSSCCHHH--HHHHHHH--TC---
T ss_pred ------CCCcc---hHHHHHHHHHHHHHHHHHHhhcC-cEEEEEEeceecchhhhhhcccchhH--HHHhhhc--cc---
Confidence 01223 777776554 11 24 99999999999996433211100110 0111111 01
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHh
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKF 296 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~ 296 (303)
.....+.+++|+|+++++++..+... ..|+.|++.++..+++.|+++.+++++
T Consensus 225 --------~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 225 --------NLKGTLLRAEDVADAVAYLAGDESKY-VSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp --------SSCSCCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred --------ccccccCCHHHHHHHHHHHcCccccc-CCCCEEEECCcccccCCccchhhhhhc
Confidence 01123678999999999988654321 345899999999999999999987654
No 88
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=99.86 E-value=2.4e-21 Score=160.96 Aligned_cols=206 Identities=16% Similarity=0.075 Sum_probs=140.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVT 103 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~ 103 (303)
++|+|+||||+|+||++++++|+ ..|+ +|++++|++.+.. ....+++++.+|+.|.+++.++++++|.|+|+++..
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~-~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEIL-EQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHH-HHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-cCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 45899999999999999999999 5788 9999999876532 122468899999999999999999999899997753
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHH
Q 042242 104 WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLED 183 (303)
Q Consensus 104 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k 183 (303)
... ....+.+++|+.++.++++++++.. ..+++++|+...|.. +..+ |+.+|
T Consensus 96 ~~~---~~~~~~~~~n~~~~~~~~~~~~~~~--~~~iv~~SS~~~~~~--------------------~~~~---Y~~sK 147 (242)
T 2bka_A 96 RGK---AGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLSSKGADKS--------------------SNFL---YLQVK 147 (242)
T ss_dssp HHH---HHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCCTT--------------------CSSH---HHHHH
T ss_pred ccc---CCcccceeeeHHHHHHHHHHHHHCC--CCEEEEEccCcCCCC--------------------Ccch---HHHHH
Confidence 221 2234578999999999999998763 346666665434311 1234 88888
Q ss_pred HHHHHh-cCC-c-ceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHH
Q 042242 184 LLKEKL-AGK-V-AWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIW 260 (303)
Q Consensus 184 ~~~e~~-~~~-~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~ 260 (303)
...+.. +.. + +++++||+.++|+.... .. ... ....... ..| ... ....+++++|+|++++.
T Consensus 148 ~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~--~~-~~~-~~~~~~~--~~~----~~~-----~~~~~~~~~dva~~~~~ 212 (242)
T 2bka_A 148 GEVEAKVEELKFDRYSVFRPGVLLCDRQES--RP-GEW-LVRKFFG--SLP----DSW-----ASGHSVPVVTVVRAMLN 212 (242)
T ss_dssp HHHHHHHHTTCCSEEEEEECCEEECTTGGG--SH-HHH-HHHHHHC--SCC----TTG-----GGGTEEEHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEcCceecCCCCCC--cH-HHH-HHHHhhc--ccC----ccc-----cCCcccCHHHHHHHHHH
Confidence 877743 232 7 59999999999963221 11 110 0111111 112 110 11236899999999999
Q ss_pred HhcCcCCcCCCCceEEeecC
Q 042242 261 VATNDDISSTKGQAFNAING 280 (303)
Q Consensus 261 ~~~~~~~~~~~g~~yni~~~ 280 (303)
++.++... +.|++.++
T Consensus 213 ~~~~~~~~----~~~~~~~~ 228 (242)
T 2bka_A 213 NVVRPRDK----QMELLENK 228 (242)
T ss_dssp HHTSCCCS----SEEEEEHH
T ss_pred HHhCcccc----CeeEeeHH
Confidence 99877542 45666543
No 89
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=99.86 E-value=3.1e-20 Score=153.72 Aligned_cols=206 Identities=13% Similarity=0.076 Sum_probs=129.6
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
.++|+|+||||||||+||++|+++|+ ..| ++|++++|++.+.. ....+++++++|+.|.+++.++++++|.|+|+++
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~-~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~ 97 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLA-DKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLT 97 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHT-TCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECC
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHH-hCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCC
Confidence 34567899999999999999999999 678 89999999877643 2345899999999999999999999998888865
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHH
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVL 181 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~ 181 (303)
... . ...+.++++++++.. ..+++++|+..+|+..... ..+..+..+ ..+...|..
T Consensus 98 ~~~-----~---------~~~~~~~~~~~~~~~--~~~iV~iSS~~~~~~~~~~-----~~~~~~~~~---~~~~~~~~~ 153 (236)
T 3qvo_A 98 GED-----L---------DIQANSVIAAMKACD--VKRLIFVLSLGIYDEVPGK-----FVEWNNAVI---GEPLKPFRR 153 (236)
T ss_dssp STT-----H---------HHHHHHHHHHHHHTT--CCEEEEECCCCC------------------------CGGGHHHHH
T ss_pred CCc-----h---------hHHHHHHHHHHHHcC--CCEEEEEecceecCCCCcc-----cccchhhcc---cchHHHHHH
Confidence 311 1 123557888888763 4466666665566433110 111222222 122111433
Q ss_pred HHHHHHHhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 182 EDLLKEKLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 182 ~k~~~e~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
.+...+ ..+ ++++++||+.++++..... . ....+. .....+++.+|+|++++++
T Consensus 154 ~~~~l~-~~g-i~~~~vrPg~i~~~~~~~~-~------------------~~~~~~-----~~~~~~i~~~DvA~~i~~l 207 (236)
T 3qvo_A 154 AADAIE-ASG-LEYTILRPAWLTDEDIIDY-E------------------LTSRNE-----PFKGTIVSRKSVAALITDI 207 (236)
T ss_dssp HHHHHH-TSC-SEEEEEEECEEECCSCCCC-E------------------EECTTS-----CCSCSEEEHHHHHHHHHHH
T ss_pred HHHHHH-HCC-CCEEEEeCCcccCCCCcce-E------------------EeccCC-----CCCCcEECHHHHHHHHHHH
Confidence 322211 224 9999999999998532211 0 010110 0011367899999999999
Q ss_pred hcCcCCcCCCCceEEeecCCC
Q 042242 262 ATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 262 ~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.. ..++.|++++++.
T Consensus 208 l~~~~~--~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 208 IDKPEK--HIGENIGINQPGT 226 (236)
T ss_dssp HHSTTT--TTTEEEEEECSSC
T ss_pred HcCccc--ccCeeEEecCCCC
Confidence 988763 2248999998764
No 90
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=99.84 E-value=3.8e-20 Score=158.83 Aligned_cols=235 Identities=13% Similarity=0.019 Sum_probs=155.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-------c-CCCeEEEEecCCCHHHHHHHHhcc---
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-------Q-SSSYCFISCDLLNPLDIKRKLTLL--- 93 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~-~~~~~~~~~D~~~~~~l~~~~~~~--- 93 (303)
.+++|+|+||||+|+||++++++|+ +.|++|++++|++.+... . ..++.++.+|++|.+++.++++.+
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLS-SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3456899999999999999999999 689999999998654320 0 356889999999999998888765
Q ss_pred ----CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccC
Q 042242 94 ----EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 94 ----~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
|.|+|+|+.... .....+..+.+++|+.++.++++++.... ....+++.+++...+.+.
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 171 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---------- 171 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC----------
Confidence 668898775322 23445555689999999999988886541 123456666553332110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+..+ |+.+|...+ +. .+ ++++++||+.++++....... ........+.. ..|
T Consensus 172 --------~~~~~---Y~~sK~a~~~~~~~la~~~~~~g-i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~--~~p- 234 (302)
T 1w6u_A 172 --------GFVVP---SASAKAGVEAMSKSLAAEWGKYG-MRFNVIQPGPIKTKGAFSRLD--PTGTFEKEMIG--RIP- 234 (302)
T ss_dssp --------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCC------CC--TTSHHHHHHHT--TCT-
T ss_pred --------CCcch---hHHHHHHHHHHHHHHHHHhhhcC-cEEEEEeeccCCCcchhhhcc--cchhhHHHHHh--cCC-
Confidence 01223 777766554 11 23 999999999999852111110 00000001111 111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
...+.+++|+|.++++++..+... ..|+.|++.++..+++.++++.+.+..|.++
T Consensus 235 ------------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~ 289 (302)
T 1w6u_A 235 ------------CGRLGTVEELANLAAFLCSDYASW-INGAVIKFDGGEEVLISGEFNDLRKVTKEQW 289 (302)
T ss_dssp ------------TSSCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTHHHHHHSTTGGGGGCCHHHH
T ss_pred ------------cCCCCCHHHHHHHHHHHcCCcccc-cCCCEEEECCCeeeccCCccccchhhccccc
Confidence 112568899999999888654321 2458999999998999999888887766543
No 91
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=99.84 E-value=2e-19 Score=152.70 Aligned_cols=233 Identities=14% Similarity=0.046 Sum_probs=148.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~ 95 (303)
++|+||||||+|+||++++++|+ +.|++|++++|+..... ....+++++.+|++|.+++.++++ .+|.
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAV-AAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CCcEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999 68999999999876532 123578999999999999888887 4577
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
|+|+|+.... ..+..+..+.+++|+.++..+.+++... .....+++.+|+...+..
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------ 144 (281)
T 3m1a_A 83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS------------------ 144 (281)
T ss_dssp EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC------------------
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC------------------
Confidence 9999765432 3344555568999999965555555432 112335555554322211
Q ss_pred CCCCCccchHHHHHHHHHH---------h-cCCcceEEecCCceeecCCCCcc----chhhHHHHHHHHhhhCCCceeeC
Q 042242 170 RVSKSNNFYYVLEDLLKEK---------L-AGKVAWSVHRPGLLLGSSHRSLY----NFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e~---------~-~~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
..+..+ |+.+|...+. . .+ ++++++||+.+.++...... .....+........ +.. .
T Consensus 145 ~~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~ 215 (281)
T 3m1a_A 145 FAGFSA---YSATKAALEQLSEGLADEVAPFG-IKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTR----QLV-Q 215 (281)
T ss_dssp CTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHH----HHH-H
T ss_pred CCCchH---HHHHHHHHHHHHHHHHHHhhccC-cEEEEEecCccccccccccccccCCcchhhHHHhHHHH----HHH-h
Confidence 011233 8887775551 1 23 99999999999885322110 00011100000000 000 0
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
+ .....+.+++|+|++++.++..+.. +..|+++++....+.+....+.+.++
T Consensus 216 ~------~~~~~~~~~~dva~a~~~~~~~~~~----~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 216 G------SDGSQPGDPAKAAAAIRLALDTEKT----PLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp C-----------CBCHHHHHHHHHHHHHSSSC----CSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred h------ccCCCCCCHHHHHHHHHHHHhCCCC----CeEEecCchHHHHHHHHHHHHHHHHH
Confidence 0 1122367899999999999887643 36899998877777777777766543
No 92
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=99.83 E-value=3.1e-19 Score=151.55 Aligned_cols=233 Identities=14% Similarity=0.095 Sum_probs=155.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc--C---CCeEEEEecCCCHHHHHHHHhc---
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ--S---SSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~--~---~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
.++|+|+||||+|+||++++++|+ +.|++|++++|++.... .. . .++.++.+|++|.++++++++.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLV-AAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999 68999999999875432 11 1 1678899999999998887764
Q ss_pred ----cCceeEEeecc-----cccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCccccc
Q 042242 93 ----LEDVTHIFWVT-----WASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 ----~~~V~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
+|.++|.|+.. ....+..+..+.+++|+.++.++++++.... .+-.+++.+++...+...
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 158 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH--------- 158 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC---------
Confidence 46688887752 2233445556689999999999999887651 222355555543333111
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.+..+ |+.+|...+ +. .+ +++.+++|+.+.++..... .........+.. ..|
T Consensus 159 ---------~~~~~---Y~asK~a~~~l~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~--~~p 220 (281)
T 3svt_A 159 ---------RWFGA---YGVTKSAVDHLMQLAADELGASW-VRVNSIRPGLIRTDLVAAI---TESAELSSDYAM--CTP 220 (281)
T ss_dssp ---------TTCTH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSGGGHHH---HTCHHHHHHHHH--HCS
T ss_pred ---------CCChh---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEEeCcCcCcchhhc---ccCHHHHHHHHh--cCC
Confidence 01223 777776554 11 23 9999999999988421110 000000001111 111
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc-HHhhHHHHHHHhcccC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT-WKEIWPSIGKKFGVKV 300 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s-~~e~~~~i~~~~g~~~ 300 (303)
+..+.+++|+|.++++++...... ..|+.|++.++..++ ..++.+.+.+.+|.+.
T Consensus 221 -------------~~r~~~~~dva~~~~~l~s~~~~~-itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 221 -------------LPRQGEVEDVANMAMFLLSDAASF-VTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp -------------SSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred -------------CCCCCCHHHHHHHHHHHhCcccCC-CCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 123567899999999988654332 346999999998777 8899999999998764
No 93
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=99.83 E-value=3e-19 Score=146.25 Aligned_cols=200 Identities=11% Similarity=0.090 Sum_probs=131.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc-ccc-c--cCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE-ITA-I--QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~-~--~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
+|+|+|+||||||+||++++++|++..|++|++++|++. +.. . ...+++++.+|+.|.+++.++++++|.|+|+++
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 456789999999999999999998347999999999876 433 1 456899999999999999999999998999876
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC-ccchHH
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS-NNFYYV 180 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~-~~~~y~ 180 (303)
.. |+. +.++++++++.+ ..+++++|+...|..... +..+..... .. + |.
T Consensus 83 ~~---------------n~~-~~~~~~~~~~~~--~~~iv~iSs~~~~~~~~~--------~~~~~~~~~-~~~~---y~ 132 (221)
T 3r6d_A 83 ES---------------GSD-MASIVKALSRXN--IRRVIGVSMAGLSGEFPV--------ALEKWTFDN-LPIS---YV 132 (221)
T ss_dssp CC---------------HHH-HHHHHHHHHHTT--CCEEEEEEETTTTSCSCH--------HHHHHHHHT-SCHH---HH
T ss_pred CC---------------Chh-HHHHHHHHHhcC--CCeEEEEeeceecCCCCc--------ccccccccc-cccH---HH
Confidence 42 233 788999988763 335555555445532210 000000000 11 3 77
Q ss_pred HHHHHHHH---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHH
Q 042242 181 LEDLLKEK---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQ 257 (303)
Q Consensus 181 ~~k~~~e~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a 257 (303)
.+|...+. ..+ ++++++||+.++++....... ....+. .....+++.+|+|++
T Consensus 133 ~~K~~~e~~~~~~~-i~~~~vrpg~v~~~~~~~~~~------------------~~~~~~-----~~~~~~~~~~dvA~~ 188 (221)
T 3r6d_A 133 QGERQARNVLRESN-LNYTILRLTWLYNDPEXTDYE------------------LIPEGA-----QFNDAQVSREAVVKA 188 (221)
T ss_dssp HHHHHHHHHHHHSC-SEEEEEEECEEECCTTCCCCE------------------EECTTS-----CCCCCEEEHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCEEEEechhhcCCCCCccee------------------eccCCc-----cCCCceeeHHHHHHH
Confidence 77766662 224 999999999999852111110 000000 000125678999999
Q ss_pred HHHHh--cCcCCcCCCCceEEeecCC
Q 042242 258 HIWVA--TNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 258 ~~~~~--~~~~~~~~~g~~yni~~~~ 281 (303)
+++++ .++.. ..++.+.+.++.
T Consensus 189 ~~~l~~~~~~~~--~~~~~~~i~~~~ 212 (221)
T 3r6d_A 189 IFDILHAADETP--FHRTSIGVGEPG 212 (221)
T ss_dssp HHHHHTCSCCGG--GTTEEEEEECTT
T ss_pred HHHHHHhcChhh--hhcceeeecCCC
Confidence 99999 66653 223678887654
No 94
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=99.83 E-value=2.2e-19 Score=150.21 Aligned_cols=218 Identities=13% Similarity=0.096 Sum_probs=144.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-TTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 456899999999999999999999 68999999999865421 113468889999999999988886
Q ss_pred ccCceeEEeecccc---cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 92 LLEDVTHIFWVTWA---SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 92 ~~~~V~~~~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
.+|.|+|+++.... ..+..+..+.+++|+.++.++++++... .....+++.+|+...|...
T Consensus 88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 153 (255)
T 1fmc_A 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-------------- 153 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC--------------
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC--------------
Confidence 66779998765432 2334555568999999999999988643 1123455665553333110
Q ss_pred CCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
.+..+ |+.+|...+ +. ... ++++++||+.++++...... .... ...+.. +.|
T Consensus 154 ----~~~~~---Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~--~~~~~~--~~~------ 214 (255)
T 1fmc_A 154 ----INMTS---YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEI--EQKMLQ--HTP------ 214 (255)
T ss_dssp ----TTCHH---HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHH--HHHHHH--TCS------
T ss_pred ----CCCcc---cHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc--ChHH--HHHHHh--cCC------
Confidence 01223 777766554 11 122 99999999999985321110 0111 011111 122
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccH
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTW 285 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~ 285 (303)
+..+.+++|+|+++++++..+... ..|+.||++++...|+
T Consensus 215 -------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 215 -------IRRLGQPQDIANAALFLCSPAASW-VSGQILTVSGGGVQEL 254 (255)
T ss_dssp -------SCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSCCCC
T ss_pred -------cccCCCHHHHHHHHHHHhCCcccc-CCCcEEEECCceeccC
Confidence 112568899999999988654321 2358999999988775
No 95
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.82 E-value=1.6e-19 Score=153.13 Aligned_cols=232 Identities=13% Similarity=0.081 Sum_probs=138.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---c--CCCeEEEEecCCCHHHHHHHHh----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I---Q--SSSYCFISCDLLNPLDIKRKLT---- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~--~~~~~~~~~D~~~~~~l~~~~~---- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. . . ..++.++.+|++|.++++++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFA-REGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 456899999999999999999999 68999999999865421 1 1 1357889999999999988887
Q ss_pred ---ccCceeEEeeccccc----C----ChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccc-cccccCCCc
Q 042242 92 ---LLEDVTHIFWVTWAS----Q----FASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKH-YVSLQGLPE 157 (303)
Q Consensus 92 ---~~~~V~~~~~~~~~~----~----~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~-y~~~~~~~g 157 (303)
.+|.++|.++..... . +..+..+.+++|+.++.++++++.... .. .+++.+|+... +...
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~----- 156 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT----- 156 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC-----
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC-----
Confidence 667788887653221 1 444455689999999999999887651 12 45555554322 2100
Q ss_pred ccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHH----HHH
Q 042242 158 EKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCV----YGA 223 (303)
Q Consensus 158 ~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~----~~~ 223 (303)
+ +... |+.+|...+ .. .+ ++++++||+.+.++.............. ...
T Consensus 157 -----------~--~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~ 219 (278)
T 1spx_A 157 -----------P--DFPY---YSIAKAAIDQYTRNTAIDLIQHG-IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT 219 (278)
T ss_dssp -----------T--TSHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBCCCC--------------HHHHHH
T ss_pred -----------C--CccH---HHHHHHHHHHHHHHHHHHHHhcC-cEEEEEecCcccCccccccccCchhhhhhhHHHHH
Confidence 0 0122 777666544 11 24 9999999999998532211000000000 000
Q ss_pred HhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHh
Q 042242 224 VCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKF 296 (303)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~ 296 (303)
+.. ..| ...+.+++|+|.++++++..+......|+.|++.++..+++.|+++.+++++
T Consensus 220 ~~~--~~p-------------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 220 MKE--CVP-------------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HHH--HCT-------------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred HHh--cCC-------------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 110 011 1236788999999999886543210124899999999999999999998765
No 96
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=99.82 E-value=4.1e-19 Score=147.62 Aligned_cols=215 Identities=10% Similarity=0.018 Sum_probs=141.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhc---cCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~ 99 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....+++++.+|++|.++++++++. +|.|+|+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALH-ASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence 456899999999999999999999 68999999999865432 1124678889999999999999874 4668898
Q ss_pred eeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-ccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 100 FWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KA-LKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 100 ~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~-~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
++... ......+..+.+++|+.++.++++++.... .+ ..+++++|+...|... .+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------~~ 145 (244)
T 1cyd_A 84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------------------PN 145 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------------TT
T ss_pred CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC------------------CC
Confidence 77432 222344555689999999999999887651 12 3456666654343111 00
Q ss_pred CCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 173 KSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
..+ |+.+|...+ +. .+ ++++++||+.++++....... ...+ ...+.+ +
T Consensus 146 ~~~---Y~~sK~a~~~~~~~~a~~~~~~g-i~v~~v~pg~v~t~~~~~~~~-~~~~--~~~~~~--~------------- 203 (244)
T 1cyd_A 146 LIT---YSSTKGAMTMLTKAMAMELGPHK-IRVNSVNPTVVLTDMGKKVSA-DPEF--ARKLKE--R------------- 203 (244)
T ss_dssp BHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBTTHHHHHHTC-CHHH--HHHHHH--H-------------
T ss_pred cch---hHHHHHHHHHHHHHHHHHhhhcC-eEEEEEecCcccCcccccccc-CHHH--HHHHHh--c-------------
Confidence 123 777766554 11 23 999999999999842110000 0000 011111 1
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..+..+.+++|+|+++++++..+... ..|+.+++.++..
T Consensus 204 ~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 204 HPLRKFAEVEDVVNSILFLLSDRSAS-TSGGGILVDAGYL 242 (244)
T ss_dssp STTSSCBCHHHHHHHHHHHHSGGGTT-CCSSEEEESTTGG
T ss_pred CCccCCCCHHHHHHHHHHHhCchhhc-ccCCEEEECCCcc
Confidence 11234778999999999988765322 3458898888754
No 97
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.81 E-value=5.4e-19 Score=146.63 Aligned_cols=208 Identities=14% Similarity=0.126 Sum_probs=138.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh------ccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT------LLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~------~~~~V~~~~ 100 (303)
|+|+|+||||+|+||++++++|+ +.|++|++++|++. ...+.++.+|++|.+++.++++ .+|.++|++
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a 74 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALK-ARGYRVVVLDLRRE-----GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA 74 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HHTCEEEEEESSCC-----SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEccCcc-----ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence 46899999999999999999999 67999999999875 2356889999999999998887 456688887
Q ss_pred ecccccC--------ChHHHHHHHHHHHHHHHHHHHHHhhccCC--------ccEEEEeecccccccccCCCcccccCCc
Q 042242 101 WVTWASQ--------FASDMHKCCEQNKAMMCNALNAILPRAKA--------LKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 101 ~~~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--------~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+...... +..+..+.+++|+.++.++++++.....+ ..+++++++...|...
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 142 (242)
T 1uay_A 75 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ------------ 142 (242)
T ss_dssp CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC------------
T ss_pred cccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC------------
Confidence 6532211 11244568999999999999998765221 1266666654343111
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+..+ |+.+|...+ .. .+ ++++++||+.++++..... .... ...+.. ..|+
T Consensus 143 ------~~~~~---Y~~sK~a~~~~~~~l~~e~~~~g-i~v~~v~Pg~v~t~~~~~~---~~~~--~~~~~~--~~~~-- 203 (242)
T 1uay_A 143 ------IGQAA---YAASKGGVVALTLPAARELAGWG-IRVVTVAPGLFDTPLLQGL---PEKA--KASLAA--QVPF-- 203 (242)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSCSSHHHHTS---CHHH--HHHHHT--TCCS--
T ss_pred ------CCCch---hhHHHHHHHHHHHHHHHHHhhcC-cEEEEEEeccCcchhhhcc---chhH--HHHHHh--hCCC--
Confidence 01223 777765443 11 24 9999999999998532111 0110 111111 1221
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
++ .+.+++|+|+++++++..+.. .|+.|++.++..++
T Consensus 204 ~~----------~~~~~~dva~~~~~l~~~~~~---~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 204 PP----------RLGRPEEYAALVLHILENPML---NGEVVRLDGALRMA 240 (242)
T ss_dssp SC----------SCCCHHHHHHHHHHHHHCTTC---CSCEEEESTTCCCC
T ss_pred cc----------cCCCHHHHHHHHHHHhcCCCC---CCcEEEEcCCeecC
Confidence 11 256889999999998877433 35899999887654
No 98
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=99.81 E-value=1.2e-18 Score=146.28 Aligned_cols=224 Identities=11% Similarity=-0.009 Sum_probs=143.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~ 95 (303)
.+|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++++|++|.++++++++ .+|.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYV-REGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999 68999999999865432 123568899999999999888887 5677
Q ss_pred eeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 96 VTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 96 V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
++|.|+... ...+..+..+.+++|+.++.++++++.... ..-.+++.+++...+.+.
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 149 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE---------------- 149 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------------
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC----------------
Confidence 889877532 222445556689999999999999887651 112355555543232110
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhC-CCceeeCCc
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHL-NLPFVFGGT 237 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~ 237 (303)
.+..+ |+.+|...+ +. .+ +++.+++|+.++++..... .. .+....... .......
T Consensus 150 --~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~----~~--~~~~~~~~~~~~~~~~~-- 215 (259)
T 4e6p_A 150 --ALVAI---YCATKAAVISLTQSAGLDLIKHR-INVNAIAPGVVDGEHWDGV----DA--LFARYENRPRGEKKRLV-- 215 (259)
T ss_dssp --TTBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCSTTHHHH----HH--HHHHHHTCCTTHHHHHH--
T ss_pred --CCChH---HHHHHHHHHHHHHHHHHHhhhcC-CEEEEEEECCCccchhhhh----hh--hhhhhccCChHHHHHHH--
Confidence 00122 777766554 11 24 9999999999998421110 00 000010000 0000000
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
... ..+..+.+++|+|.++++++...... ..|+.|++.+|..+|
T Consensus 216 -~~~-~p~~r~~~~~dva~~v~~L~s~~~~~-itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 216 -GEA-VPFGRMGTAEDLTGMAIFLASAESDY-IVSQTYNVDGGNWMS 259 (259)
T ss_dssp -HHH-STTSSCBCTHHHHHHHHHTTSGGGTT-CCSCEEEESTTSSCC
T ss_pred -hcc-CCCCCCcCHHHHHHHHHHHhCCccCC-CCCCEEEECcChhcC
Confidence 000 23345778899999998887644322 346899999987654
No 99
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=99.81 E-value=1.3e-19 Score=151.53 Aligned_cols=224 Identities=16% Similarity=0.073 Sum_probs=142.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh----ccCceeEEeeccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT----LLEDVTHIFWVTW 104 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~----~~~~V~~~~~~~~ 104 (303)
|+||||||+|+||++++++|+ +.|++|++++|++.+... .+.+|+.|.++++++++ ++|.|+|+++...
T Consensus 2 k~vlVtGasg~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLA-RAGHTVIGIDRGQADIEA------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV 74 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSSSSEEC------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred cEEEEeCCCcHHHHHHHHHHH-hCCCEEEEEeCChhHccc------cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence 689999999999999999999 689999999998765321 15689999999988887 6677999977543
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc-------CcCCCCC----
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY-------DEECPRV---- 171 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~-------~e~~~~~---- 171 (303)
.... ..+.+++|+.++.++++++.+. .....+++++|+...|..... ..+. +|+.+..
T Consensus 75 ~~~~---~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 145 (255)
T 2dkn_A 75 TAAN---SGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA------ELPMVEAMLAGDEARAIELAEQ 145 (255)
T ss_dssp TSSC---HHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG------GCHHHHHHHHTCHHHHHHHHHH
T ss_pred cchh---HHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc------ccchhhhhcccchhhhhhhccc
Confidence 2222 2347999999999999988765 223456777766656633211 0011 0110000
Q ss_pred CCCccchHHHHHHHHHH-----h-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 172 SKSNNFYYVLEDLLKEK-----L-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e~-----~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
+..+...|+.+|...+. . .+ ++++++||+.++|+.... ..... ....... .+.+
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g-i~v~~v~pg~v~~~~~~~---~~~~~-~~~~~~~------~~~~----- 209 (255)
T 2dkn_A 146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRG-VRLNVVAPGAVETPLLQA---SKADP-RYGESTR------RFVA----- 209 (255)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHTHHHHHHTT-CEEEEEEECCBCSHHHHH---HHHCT-TTHHHHH------SCCC-----
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHhhcC-cEEEEEcCCcccchhhhh---cccch-hhHHHHH------HHHH-----
Confidence 00122338887776551 1 24 999999999999842110 00000 0000000 0000
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHh
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
....+++++|+|+++++++..+... ..|+.||++++..++++|
T Consensus 210 --~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 210 --PLGRGSEPREVAEAIAFLLGPQASF-IHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp --TTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTHHHHHCT
T ss_pred --HhcCCCCHHHHHHHHHHHhCCCccc-ceeeEEEecCCeEeeeec
Confidence 1124789999999999998765321 235899999998777665
No 100
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=99.81 E-value=1.9e-18 Score=144.94 Aligned_cols=209 Identities=15% Similarity=0.125 Sum_probs=139.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-------ccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-------LLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~~~ 99 (303)
++|+||||||+|+||++++++|+ +.|++|++++|+.... ...++.++.+|++|.++++++++ .+|.++|.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n 103 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYR-DRNYRVVATSRSIKPS--ADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNN 103 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSCCCC--SSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChhhc--ccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence 46899999999999999999999 6899999999987543 23478899999999999888877 56778888
Q ss_pred eecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 100 FWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 100 ~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+... + .
T Consensus 104 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------------~---~ 164 (260)
T 3un1_A 104 AGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM----------------V---G 164 (260)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB----------------T---T
T ss_pred CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC----------------C---C
Confidence 765432 2244555568999999999999987543 1223455555543222100 0 1
Q ss_pred CccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhh
Q 042242 174 SNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEY 244 (303)
Q Consensus 174 ~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (303)
.+...|+.+|...+ ..... +++.+++|+.++++..... .. ..+.. ..|
T Consensus 165 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-----~~---~~~~~--~~p------------- 221 (260)
T 3un1_A 165 MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-----TH---STLAG--LHP------------- 221 (260)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-----GH---HHHHT--TST-------------
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-----HH---HHHhc--cCC-------------
Confidence 12223777666544 11122 9999999999998532211 00 00110 112
Q ss_pred cccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 245 CLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 245 ~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
...+.+++|+|.+++++...... .|+.|++.+|...
T Consensus 222 ~~r~~~~~dva~av~~L~~~~~i---tG~~i~vdGG~~~ 257 (260)
T 3un1_A 222 VGRMGEIRDVVDAVLYLEHAGFI---TGEILHVDGGQNA 257 (260)
T ss_dssp TSSCBCHHHHHHHHHHHHHCTTC---CSCEEEESTTGGG
T ss_pred CCCCcCHHHHHHHHHHhcccCCC---CCcEEEECCCeec
Confidence 12356889999999988444433 3599999988654
No 101
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=99.81 E-value=1.2e-18 Score=146.59 Aligned_cols=219 Identities=13% Similarity=0.047 Sum_probs=138.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc--C-------CCeEEEEecCCCHHHHHHHHh
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ--S-------SSYCFISCDLLNPLDIKRKLT 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~--~-------~~~~~~~~D~~~~~~l~~~~~ 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.... .. . .++.++.+|++|.+++.++++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLA-GEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 457899999999999999999999 68999999999865422 10 0 467889999999999988887
Q ss_pred cc--------CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccC--C-ccEEEEeecccccccccCCC
Q 042242 92 LL--------EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAK--A-LKHVSLQTGMKHYVSLQGLP 156 (303)
Q Consensus 92 ~~--------~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~-~~~~~~~s~~~~y~~~~~~~ 156 (303)
.+ |.|+|+++.... ..+..+..+.+++|+.++.++++++.+... + ..+++.+|+...+.+.
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 159 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---- 159 (264)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC----
T ss_pred HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC----
Confidence 64 678898765432 224455556899999999999999877511 1 2456665553222110
Q ss_pred cccccCCcCcCCCCCCCCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhh
Q 042242 157 EEKQVRFYDEECPRVSKSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCK 226 (303)
Q Consensus 157 g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 226 (303)
.+... |+.+|...+ + . .+ ++++++||+.++++..... .... ...+..
T Consensus 160 --------------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~---~~~~--~~~~~~ 216 (264)
T 2pd6_A 160 --------------VGQTN---YAASKAGVIGLTQTAARELGRHG-IRCNSVLPGFIATPMTQKV---PQKV--VDKITE 216 (264)
T ss_dssp --------------TTBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSCC---------------CTGG
T ss_pred --------------CCChh---hHHHHHHHHHHHHHHHHHhhhcC-eEEEEEeeecccccchhhc---CHHH--HHHHHH
Confidence 00122 777776444 1 1 23 9999999999998532211 0000 000000
Q ss_pred hCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhh
Q 042242 227 HLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEI 288 (303)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~ 288 (303)
. ..+..+.+++|+|+++++++..+... ..|+.+++.++..+++...
T Consensus 217 --~-------------~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 217 --M-------------IPMGHLGDPEDVADVVAFLASEDSGY-ITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp --G-------------CTTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTC-------
T ss_pred --h-------------CCCCCCCCHHHHHHHHHHHcCCcccC-CCCCEEEECCCceeccccC
Confidence 0 11123568899999999888654321 3458999999887665544
No 102
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=99.80 E-value=6.6e-18 Score=141.66 Aligned_cols=217 Identities=12% Similarity=0.039 Sum_probs=140.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALA-EAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999 68999999999865421 113468899999999999888876
Q ss_pred ccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 LLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.|+|+++... ...+..+..+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 157 (260)
T 3awd_A 90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN------------ 157 (260)
T ss_dssp CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC------------
Confidence 4677899876432 12234445568999999999999988764 1123455555543222100
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+ ..+...|+.+|...+ +. .+ ++++++||+.++++..... .... .....+.. ..|
T Consensus 158 ----~---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g-i~v~~v~pg~v~t~~~~~~--~~~~-~~~~~~~~--~~~--- 221 (260)
T 3awd_A 158 ----R---PQQQAAYNASKAGVHQYIRSLAAEWAPHG-IRANAVAPTYIETTLTRFG--MEKP-ELYDAWIA--GTP--- 221 (260)
T ss_dssp ----S---SSCCHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCTTTHHH--HTCH-HHHHHHHH--TCT---
T ss_pred ----C---CCCccccHHHHHHHHHHHHHHHHHhhhcC-eEEEEEEeeeeccchhhcc--cCCh-HHHHHHHh--cCC---
Confidence 1 111122887777554 11 23 9999999999999532201 0000 01111111 112
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|+++++++..+... ..|+.|++.++..
T Consensus 222 ----------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~~ 258 (260)
T 3awd_A 222 ----------MGRVGQPDEVASVVQFLASDAASL-MTGAIVNVDAGFT 258 (260)
T ss_dssp ----------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTT
T ss_pred ----------cCCCCCHHHHHHHHHHHhCchhcc-CCCcEEEECCcee
Confidence 112668899999999888654321 3458999988753
No 103
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=99.79 E-value=6.7e-18 Score=140.78 Aligned_cols=213 Identities=14% Similarity=0.149 Sum_probs=137.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-c--CCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-Q--SSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~--~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
|+|+|+||||+|+||++++++|+ +.|++|++++|++.+.. . . ..++.++.+|++|.++++++++
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFL-ARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999 68999999999865421 1 1 2357889999999999888876
Q ss_pred ccCceeEEeecccc-------cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccC
Q 042242 92 LLEDVTHIFWVTWA-------SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 ~~~~V~~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.|+|+++.... .....+..+.+++|+.++.++++.+... ..+..+++.+++...+...
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 149 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF---------- 149 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------
Confidence 56778898765322 2234455568899999998887776653 1123456665543332110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+..+ |+.+|...+ + . .+ ++++++||+.++++....... .. .....+.. ..|
T Consensus 150 --------~~~~~---Y~~sK~a~~~~~~~l~~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~--~~-~~~~~~~~--~~~- 211 (250)
T 2cfc_A 150 --------PGRSA---YTTSKGAVLQLTKSVAVDYAGSG-IRCNAVCPGMIETPMTQWRLD--QP-ELRDQVLA--RIP- 211 (250)
T ss_dssp --------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSTTTHHHHT--SH-HHHHHHHT--TCT-
T ss_pred --------CCchh---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEEeCcCccCccccccC--CH-HHHHHHHh--cCC-
Confidence 01223 777766554 1 1 14 999999999999953221000 00 00011111 112
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|.++++++..+... ..|+.+++.++.
T Consensus 212 ------------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gG~ 247 (250)
T 2cfc_A 212 ------------QKEIGTAAQVADAVMFLAGEDATY-VNGAALVMDGAY 247 (250)
T ss_dssp ------------TCSCBCHHHHHHHHHHHHSTTCTT-CCSCEEEESTTG
T ss_pred ------------CCCCcCHHHHHHHHHHHcCchhhc-ccCCEEEECCce
Confidence 112568899999999988765322 345889998774
No 104
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=99.79 E-value=3.6e-18 Score=141.89 Aligned_cols=215 Identities=10% Similarity=0.046 Sum_probs=140.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhc---cCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~ 99 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. .+.++++++.+|++|.++++++++. +|.|+|+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALH-ATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence 346899999999999999999999 68999999999865432 1124677889999999999999874 5668888
Q ss_pred eecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-ccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 100 FWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KA-LKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 100 ~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~-~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
++.... ........+.+++|+.++.++++++.... .. ..+++.+++...+... .+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------~~ 145 (244)
T 3d3w_A 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------------------TN 145 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------------TT
T ss_pred CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC------------------CC
Confidence 765332 22344455689999999999998887641 11 3455665553332110 01
Q ss_pred CCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 173 KSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
..+ |+.+|...+ + . .+ ++++++||+.++++........ ... ...+.. ..|
T Consensus 146 ~~~---Y~~sK~a~~~~~~~la~e~~~~~-i~v~~v~Pg~v~t~~~~~~~~~-~~~--~~~~~~--~~~----------- 205 (244)
T 3d3w_A 146 HSV---YCSTKGALDMLTKVMALELGPHK-IRVNAVNPTVVMTSMGQATWSD-PHK--AKTMLN--RIP----------- 205 (244)
T ss_dssp BHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBTTTTHHHHSCS-TTH--HHHHHH--TCT-----------
T ss_pred Cch---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEEeccccccchhhhccC-hHH--HHHHHh--hCC-----------
Confidence 223 787776655 1 1 23 9999999999998421110000 000 000111 111
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|+++++++..+... ..|+.|++.++..
T Consensus 206 --~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 206 --LGKFAEVEHVVNAILFLLSDRSGM-TTGSTLPVEGGFW 242 (244)
T ss_dssp --TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred --CCCCcCHHHHHHHHHHHcCccccC-CCCCEEEECCCcc
Confidence 123678999999999988754321 3458999988754
No 105
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=99.79 E-value=4.5e-18 Score=143.03 Aligned_cols=218 Identities=12% Similarity=0.067 Sum_probs=141.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-----c---CCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-----Q---SSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~---~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+... . ..++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFA-KEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999 689999999998654220 0 3468889999999999888876
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.++.... .....+..+.+++|+.++.++++++... ..+..+++.+++...|...
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 151 (263)
T 3ai3_A 84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL------------ 151 (263)
T ss_dssp SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC------------
Confidence 56778898765322 2244455568999999999999887653 1123455665554333110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhH--------HHHH-HHHh
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGC--------LCVY-GAVC 225 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~--------~~~~-~~~~ 225 (303)
.+..+ |+.+|...+ +. .+ ++++++||+.++++.... .... .... ..+.
T Consensus 152 ------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~ 218 (263)
T 3ai3_A 152 ------WYEPI---YNVTKAALMMFSKTLATEVIKDN-IRVNCINPGLILTPDWIK---TAKELTKDNGGDWKGYLQSVA 218 (263)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCHHHHH---HHHHHTTTTTCCHHHHHHHHH
T ss_pred ------CCcch---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEecCcccCcchhh---hhHhhhcccCCcHHHHHHHHH
Confidence 00223 777666544 11 23 999999999999842110 0000 0000 0000
Q ss_pred hhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 226 KHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 226 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
.. .. ....+.+++|+|.++++++..+... ..|+.|++.++...|
T Consensus 219 ~~-~~-------------p~~~~~~~~dvA~~~~~l~s~~~~~-~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 219 DE-HA-------------PIKRFASPEELANFFVFLCSERATY-SVGSAYFVDGGMLKT 262 (263)
T ss_dssp HH-HC-------------TTCSCBCHHHHHHHHHHHTSTTCTT-CCSCEEEESTTCCCC
T ss_pred hc-CC-------------CCCCCcCHHHHHHHHHHHcCccccC-CCCcEEEECCCcccc
Confidence 00 01 1123678999999999988654322 345899999987665
No 106
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=99.79 E-value=3.5e-17 Score=138.12 Aligned_cols=228 Identities=15% Similarity=0.037 Sum_probs=146.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
+.+|+++||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++ .+|
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLA-RAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 456899999999999999999999 68999999999876532 123578899999999999888887 566
Q ss_pred ceeEEeecccc------cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 95 DVTHIFWVTWA------SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 95 ~V~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
.++|.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------------- 153 (271)
T 3tzq_B 88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY-------------- 153 (271)
T ss_dssp EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC--------------
T ss_pred EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC--------------
Confidence 78888765422 2244555568999999999999998543 1223455555543332110
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.+... |+.+|...+ +. .+ +++.+++|+.++++....... ... ...+.. ..+
T Consensus 154 ----~~~~~---Y~asKaa~~~l~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~~~--~~~--~~~~~~--~~~----- 214 (271)
T 3tzq_B 154 ----DMSTA---YACTKAAIETLTRYVATQYGRHG-VRCNAIAPGLVRTPRLEVGLP--QPI--VDIFAT--HHL----- 214 (271)
T ss_dssp ----SSCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCTTTC---C--HHH--HHHHHT--TST-----
T ss_pred ----CCChH---HHHHHHHHHHHHHHHHHHHhhcC-EEEEEEEeCCCcCccccccCC--HHH--HHHHHh--cCC-----
Confidence 00223 777766554 11 23 999999999999854321111 110 011111 111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHh
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKF 296 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~ 296 (303)
...+.+++|+|.++++++...... ..|+.+++.+|....+..+.+...+.+
T Consensus 215 --------~~r~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdGG~~~~~~~~~~~~~~~~ 265 (271)
T 3tzq_B 215 --------AGRIGEPHEIAELVCFLASDRAAF-ITGQVIAADSGLLAHLPGLPQIRASVA 265 (271)
T ss_dssp --------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTTTBCTTHHHHHHHHH
T ss_pred --------CCCCcCHHHHHHHHHHHhCcccCC-cCCCEEEECCCccccCCCccccCCccc
Confidence 112567899999999988655332 456899999884333333444333433
No 107
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=99.78 E-value=9.1e-18 Score=140.88 Aligned_cols=218 Identities=15% Similarity=0.073 Sum_probs=140.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
.+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|+.|.++++++++
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLA-QDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3457899999999999999999999 68999999999865422 012467889999999998888776
Q ss_pred -ccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 92 -LLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 -~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.++|.++... ...+..+..+.+++|+.++.++++++... ..+..+++.+++...|...
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 158 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF----------- 158 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-----------
Confidence 5677888876431 22334455568999999999999887643 1223456666554333110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.+..+ |+.+|...+ .. .+ +++++++|+.+.++..... .... .....+.. .
T Consensus 159 -------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~--~~~~-~~~~~~~~--~---- 218 (260)
T 2zat_A 159 -------PNLGP---YNVSKTALLGLTKNLAVELAPRN-IRVNCLAPGLIKTNFSQVL--WMDK-ARKEYMKE--S---- 218 (260)
T ss_dssp -------TTBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSSTTHHH--HSSH-HHHHHHHH--H----
T ss_pred -------CCchh---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEEECcccCccchhc--ccCh-HHHHHHHh--c----
Confidence 00122 777666444 11 23 9999999999987421100 0000 00000000 0
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
.....+.+++|+|.++++++..+... ..|+.|++.+|...|
T Consensus 219 ---------~~~~~~~~~~dva~~v~~l~s~~~~~-~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 219 ---------LRIRRLGNPEDCAGIVSFLCSEDASY-ITGETVVVGGGTASR 259 (260)
T ss_dssp ---------HTCSSCBCGGGGHHHHHHHTSGGGTT-CCSCEEEESTTCCCC
T ss_pred ---------CCCCCCCCHHHHHHHHHHHcCcccCC-ccCCEEEECCCcccc
Confidence 11223667888999998887654321 345899999988765
No 108
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=99.78 E-value=9.2e-18 Score=139.69 Aligned_cols=212 Identities=14% Similarity=0.148 Sum_probs=139.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
++|+++||||+|+||++++++|+ +.|++|++++|+..... ....++.++++|++|.++++++++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLA-EEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999 68999999988653321 113467889999999999888877
Q ss_pred ccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.|+... ...+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 148 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN------------- 148 (246)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-------------
Confidence 4567888876543 22244555568999999999999998543 1123345555543232111
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+..+ |+.+|...+ +. .+ +++.+++|+.+.++...... ... ...+.. ..|
T Consensus 149 -----~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~~---~~~--~~~~~~--~~p---- 208 (246)
T 3osu_A 149 -----PGQAN---YVATKAGVIGLTKSAARELASRG-ITVNAVAPGFIVSDMTDALS---DEL--KEQMLT--QIP---- 208 (246)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBGGGCCSCSC---HHH--HHHHHT--TCT----
T ss_pred -----CCChH---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEEECCCcCCcccccC---HHH--HHHHHh--cCC----
Confidence 01223 787776443 11 23 99999999999985432211 111 011111 222
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+.+|+|.++++++..+... ..|+.|++.+|..
T Consensus 209 ---------~~r~~~~~dva~~v~~l~s~~~~~-itG~~i~vdgG~~ 245 (246)
T 3osu_A 209 ---------LARFGQDTDIANTVAFLASDKAKY-ITGQTIHVNGGMY 245 (246)
T ss_dssp ---------TCSCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTSC
T ss_pred ---------CCCCcCHHHHHHHHHHHhCccccC-CCCCEEEeCCCcc
Confidence 122557889999999887655332 3468999988753
No 109
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=99.78 E-value=1.4e-17 Score=138.67 Aligned_cols=207 Identities=12% Similarity=0.090 Sum_probs=137.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHh-------ccCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLT-------LLEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V 96 (303)
|+|+||||||+|+||++++++|+ +.|++|++++|++.... .+.+++.++++|++|.++++++++ .+|.+
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 79 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFL-EAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999999999 68999999999875432 233567799999999999888776 46678
Q ss_pred eEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 97 THIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 97 ~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
+|.|+.... ..+..+....+++|+.++.++++++... ..+-.+++.+++...+.+. .
T Consensus 80 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------------~ 141 (247)
T 3dii_A 80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE------------------P 141 (247)
T ss_dssp EECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC------------------T
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCC------------------C
Confidence 888765332 3334555668999999999999998765 1112355555543333111 0
Q ss_pred CCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 172 SKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
+..+ |+.+|...+ +... +++..+.|+.+..+...... .. ... ..|
T Consensus 142 ~~~~---Y~asKaa~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~---~~------~~~--~~p----------- 195 (247)
T 3dii_A 142 DSEA---YASAKGGIVALTHALAMSLGPD-VLVNCIAPGWINVTEQQEFT---QE------DCA--AIP----------- 195 (247)
T ss_dssp TCHH---HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCCCC---CC---HH------HHH--TST-----------
T ss_pred CcHH---HHHHHHHHHHHHHHHHHHHCCC-cEEEEEEeCccCCcchhhHH---HH------HHh--cCC-----------
Confidence 0223 777776554 2233 88999999988864221110 00 000 112
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
...+.+++|+|.++++++..... .|+.+++.++...
T Consensus 196 --~~r~~~p~dva~~v~~l~~~~~i---tG~~i~vdGG~~~ 231 (247)
T 3dii_A 196 --AGKVGTPKDISNMVLFLCQQDFI---TGETIIVDGGMSK 231 (247)
T ss_dssp --TSSCBCHHHHHHHHHHHHTCSSC---CSCEEEESTTGGG
T ss_pred --CCCCcCHHHHHHHHHHHHcCCCC---CCcEEEECCCccc
Confidence 11256889999999999855433 3589999887543
No 110
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=99.78 E-value=1.2e-17 Score=140.39 Aligned_cols=220 Identities=13% Similarity=0.083 Sum_probs=139.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I---QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+..+.. . ...++.++.+|+.|.++++++++.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVA-AAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHH-HTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 456899999999999999999999 68999999999655421 0 134688899999999998887765
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccCC
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|+++.... .....+..+.+++|+.++.++++++.... ....+++++|+...+....
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 160 (265)
T 1h5q_A 91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ---------- 160 (265)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE----------
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccc----------
Confidence 4558888765322 22344555689999999999999987641 1124566665543331110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
....+..+..+ |+.+|...+ + . .+ ++++++||+.++++..... .... ...... ..|
T Consensus 161 -~~~~~~~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~---~~~~--~~~~~~--~~~-- 226 (265)
T 1h5q_A 161 -SSLNGSLTQVF---YNSSKAACSNLVKGLAAEWASAG-IRVNALSPGYVNTDQTAHM---DKKI--RDHQAS--NIP-- 226 (265)
T ss_dssp -EETTEECSCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCGGGGGS---CHHH--HHHHHH--TCT--
T ss_pred -ccccccccccc---cHHHHHHHHHHHHHHHHHHHhcC-cEEEEEecCcccccccccc---chhH--HHHHHh--cCc--
Confidence 00011111223 877776554 1 1 24 9999999999998532211 0111 000111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|.++++++..+... ..|+.|++.++..
T Consensus 227 -----------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 227 -----------LNRFAQPEEMTGQAILLLSDHATY-MTGGEYFIDGGQL 263 (265)
T ss_dssp -----------TSSCBCGGGGHHHHHHHHSGGGTT-CCSCEEEECTTGG
T ss_pred -----------ccCCCCHHHHHHHHHhhccCchhc-CcCcEEEecCCEe
Confidence 112567788899999888654321 3458999988753
No 111
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=99.78 E-value=9.3e-18 Score=139.71 Aligned_cols=212 Identities=13% Similarity=0.072 Sum_probs=137.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+... ...++.++.+|+.|.++++++++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLA-SAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 456899999999999999999999 689999999998654220 13468889999999999988887
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.|+|+++.... ..+..+..+.+++|+.++.++++++.+. ..+..+++.+|+...+.+.
T Consensus 84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 151 (248)
T 2pnf_A 84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN------------ 151 (248)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC------------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC------------
Confidence 56779998765332 2234455568999999998888776553 1123456665553222110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+ +..+ |+.+|...+ .. .+ ++++++||+.++++..... . ... ...... ..|
T Consensus 152 ----~--~~~~---Y~~sK~a~~~~~~~la~e~~~~~-i~v~~v~Pg~v~t~~~~~~-~--~~~--~~~~~~--~~~--- 211 (248)
T 2pnf_A 152 ----V--GQVN---YSTTKAGLIGFTKSLAKELAPRN-VLVNAVAPGFIETDMTAVL-S--EEI--KQKYKE--QIP--- 211 (248)
T ss_dssp ----T--TCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCGGGGGS-C--HHH--HHHHHH--TCT---
T ss_pred ----C--CCch---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEEeceecCchhhhc-c--HHH--HHHHHh--cCC---
Confidence 0 0223 777665443 11 23 9999999999998532211 0 110 001111 111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|+++++++...... ..|+.|++.++.
T Consensus 212 ----------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~ 247 (248)
T 2pnf_A 212 ----------LGRFGSPEEVANVVLFLCSELASY-ITGEVIHVNGGM 247 (248)
T ss_dssp ----------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTC
T ss_pred ----------CCCccCHHHHHHHHHHHhCchhhc-CCCcEEEeCCCc
Confidence 112668899999999888654221 335899998763
No 112
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=99.78 E-value=1.8e-17 Score=138.80 Aligned_cols=220 Identities=11% Similarity=0.020 Sum_probs=141.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh------
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
.+++|++|||||+|+||++++++|+ +.|++|++++|++.... . ...++.++.+|++|.++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFA-KEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4567899999999999999999999 68999999999875432 1 12468889999999999888776
Q ss_pred -ccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc---cCCccEEEEeecccccccccCCCcccccCC
Q 042242 92 -LLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR---AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 -~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.++|.|+... ...+..+....+++|+.++.++++++... .....+++.+++...+...
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 150 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG----------- 150 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------
Confidence 4566888876432 22344555568999999999999988543 1123345555443222110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
+ .... |+.+|...+ +. .+ +++..++|+.+.++............. ..+.. .
T Consensus 151 -----~--~~~~---Y~asKaa~~~l~~~la~e~~~~~g-Irvn~v~PG~v~t~~~~~~~~~~~~~~--~~~~~--~--- 212 (257)
T 3imf_A 151 -----P--GVIH---SAAAKAGVLAMTKTLAVEWGRKYG-IRVNAIAPGPIERTGGADKLWISEEMA--KRTIQ--S--- 212 (257)
T ss_dssp -----T--TCHH---HHHHHHHHHHHHHHHHHHHHHHHC-CEEEEEEECCBSSCCCC-------CCS--HHHHT--T---
T ss_pred -----C--CcHH---HHHHHHHHHHHHHHHHHHhccccC-eEEEEEEECCCcCCcchhhcccCHHHH--HHHHh--c---
Confidence 0 0122 776665433 22 25 999999999998853221100000000 00000 1
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccH
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTW 285 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~ 285 (303)
..+..+.+++|+|.++++++...... ..|+.+++.+|..++.
T Consensus 213 ----------~p~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG~~~~~ 254 (257)
T 3imf_A 213 ----------VPLGRLGTPEEIAGLAYYLCSDEAAY-INGTCMTMDGGQHLHQ 254 (257)
T ss_dssp ----------STTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTTSCC
T ss_pred ----------CCCCCCcCHHHHHHHHHHHcCchhcC-ccCCEEEECCCcccCC
Confidence 11223668899999999988655322 3468999999876654
No 113
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=99.78 E-value=1.3e-17 Score=139.95 Aligned_cols=208 Identities=12% Similarity=0.084 Sum_probs=137.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|++|.++++++++ .+|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 83 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMV-AEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH 83 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 456899999999999999999999 68999999999865432 112347889999999999988887 577
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.++.... ..+..+..+.+++|+.++.++++++.+. ..+..+++.+++...|.+.
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 147 (260)
T 1nff_A 84 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT---------------- 147 (260)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC----------------
Confidence 78898765322 2234455568999999997777766543 1123455555543333110
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
+ +..+ |+.+|...+ .. .+ ++++++||+.++++... . .. . .+. .
T Consensus 148 ~--~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~----~-~~-----------~-~~~--~-- 200 (260)
T 1nff_A 148 V--ACHG---YTATKFAVRGLTKSTALELGPSG-IRVNSIHPGLVKTPMTD----W-VP-----------E-DIF--Q-- 200 (260)
T ss_dssp T--TBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCSGGGT----T-SC-----------T-TCS--C--
T ss_pred C--Cchh---HHHHHHHHHHHHHHHHHHhCccC-cEEEEEEeCCCCCCccc----c-ch-----------h-hHH--h--
Confidence 0 0122 777666554 11 24 99999999999985321 0 00 0 000 0
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..+..+.+++|+|.++++++..+... ..|+.|++.++..
T Consensus 201 ----~~~~~~~~~~dvA~~v~~l~s~~~~~-~~G~~~~v~gG~~ 239 (260)
T 1nff_A 201 ----TALGRAAEPVEVSNLVVYLASDESSY-STGAEFVVDGGTV 239 (260)
T ss_dssp ----CSSSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred ----CccCCCCCHHHHHHHHHHHhCccccC-CcCCEEEECCCee
Confidence 11123568899999999988654322 3458999988863
No 114
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=99.78 E-value=2.7e-18 Score=143.75 Aligned_cols=214 Identities=14% Similarity=0.087 Sum_probs=138.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC-Ccccc-------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARK-PEITA-------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+ +.+.. ....++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFA-RAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356899999999999999999999 689999999998 54321 013468889999999999988887
Q ss_pred -ccCceeEEeec-cc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC--c---cEEEEeecccccccccCCCcc
Q 042242 92 -LLEDVTHIFWV-TW----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KA--L---KHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 92 -~~~~V~~~~~~-~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~--~---~~~~~~s~~~~y~~~~~~~g~ 158 (303)
.+|.|+|+++. .. .........+.+++|+.++.++++++.... .. . .+++.+++...+...
T Consensus 84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 157 (258)
T 3afn_B 84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG------ 157 (258)
T ss_dssp SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC------
T ss_pred CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC------
Confidence 67779999764 21 122334455688999999999998876541 01 1 455555543232100
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhC
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHL 228 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
..+..+ |+.+|...+ .. .+ ++++++||+.++++..... .... ...+..
T Consensus 158 -----------~~~~~~---Y~~sK~a~~~~~~~~~~e~~~~g-i~v~~v~Pg~v~t~~~~~~---~~~~--~~~~~~-- 215 (258)
T 3afn_B 158 -----------GPGAGL---YGAAKAFLHNVHKNWVDFHTKDG-VRFNIVSPGTVDTAFHADK---TQDV--RDRISN-- 215 (258)
T ss_dssp -----------CTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBSSGGGTTC---CHHH--HHHHHT--
T ss_pred -----------CCCchH---HHHHHHHHHHHHHHHHHhhcccC-eEEEEEeCCCccccccccc---CHHH--HHHHhc--
Confidence 001223 777776554 11 14 9999999999998532211 0111 011111
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+.| +..+.+++|+|+++++++..+......|+.|++.++.
T Consensus 216 ~~~-------------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 216 GIP-------------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp TCT-------------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred cCC-------------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 111 1236688889999998886542201235899998875
No 115
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=99.77 E-value=1.7e-17 Score=140.79 Aligned_cols=224 Identities=16% Similarity=0.101 Sum_probs=137.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------c---cCCCeEEEEecCCCHHHHHHHHh----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------I---QSSSYCFISCDLLNPLDIKRKLT---- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~---~~~~~~~~~~D~~~~~~l~~~~~---- 91 (303)
++++|++|||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|++|.++++++++
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLA-KAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999 68999999999543211 1 13468889999999999888876
Q ss_pred ---ccCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccC
Q 042242 92 ---LLEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 ---~~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|.|+..... .+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 170 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS---------- 170 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC----------
Confidence 456688887754322 244555568999999999999987543 1122345555543232110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhh-hCCCc
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCK-HLNLP 231 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~ 231 (303)
....+ |+.+|...+ +. .+ +++.+++|+.+.++....... .......... .....
T Consensus 171 --------~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~ 235 (281)
T 3v2h_A 171 --------PFKSA---YVAAKHGIMGLTKTVALEVAESG-VTVNSICPGYVLTPLVEKQIP---DQARTRGITEEQVINE 235 (281)
T ss_dssp --------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCC---------------------------
T ss_pred --------CCchH---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEECCCCcCcchhhhcc---hhhhhcCCCHHHHHHH
Confidence 00223 777776544 22 23 999999999999853221110 0000000000 00000
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
....+ .....+.+++|+|.++++++...... ..|+.+++.+|.
T Consensus 236 ~~~~~------~p~~r~~~~edvA~~v~~L~s~~a~~-itG~~i~vdGG~ 278 (281)
T 3v2h_A 236 VMLKG------QPTKKFITVEQVASLALYLAGDDAAQ-ITGTHVSMDGGW 278 (281)
T ss_dssp ----C------CTTCSCBCHHHHHHHHHHHHSSGGGG-CCSCEEEESTTG
T ss_pred HHHhc------CCCCCccCHHHHHHHHHHHcCCCcCC-CCCcEEEECCCc
Confidence 01111 23345788999999999988665432 346899998874
No 116
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=99.77 E-value=3.5e-17 Score=137.10 Aligned_cols=213 Identities=13% Similarity=0.122 Sum_probs=137.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----cCCCeEEEEecCCCHHHHHHHHh-------ccCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----QSSSYCFISCDLLNPLDIKRKLT-------LLED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~-------~~~~ 95 (303)
++|+++||||+|+||++++++|+ +.|++|++++|++..... ...++.++.+|++|.++++++++ .+|.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLA-QEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999 689999999998765331 12367889999999999888876 5667
Q ss_pred eeEEeecccc--------cCChHHHHHHHHHHHHHHHHHHHHHhhcc-C-------CccEEEEeecccccccccCCCccc
Q 042242 96 VTHIFWVTWA--------SQFASDMHKCCEQNKAMMCNALNAILPRA-K-------ALKHVSLQTGMKHYVSLQGLPEEK 159 (303)
Q Consensus 96 V~~~~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-------~~~~~~~~s~~~~y~~~~~~~g~~ 159 (303)
++|.|+.... ..+..+..+.+++|+.++..+++++.... . +..+++.+++...+.+.
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~------- 157 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ------- 157 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-------
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC-------
Confidence 8888765422 22345555689999999999999988651 1 23456665554333111
Q ss_pred ccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCC
Q 042242 160 QVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLN 229 (303)
Q Consensus 160 ~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 229 (303)
.+..+ |+.+|...+ +. .+ +++.+++|+.|.++..... .... ...+.. .
T Consensus 158 -----------~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~---~~~~--~~~~~~--~ 215 (257)
T 3tpc_A 158 -----------IGQAA---YAASKGGVAALTLPAARELARFG-IRVVTIAPGIFDTPMMAGM---PQDV--QDALAA--S 215 (257)
T ss_dssp -----------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBSCC-------------------C--C
T ss_pred -----------CCCcc---hHHHHHHHHHHHHHHHHHHHHcC-eEEEEEEeCCCCChhhccC---CHHH--HHHHHh--c
Confidence 00223 777775444 12 23 9999999999988432111 0000 000000 1
Q ss_pred CceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 230 LPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 230 ~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
.|+ + ..+.+++|+|.++++++..... .|+.+++.+|..++
T Consensus 216 ~p~--~----------~r~~~~~dva~~v~~l~s~~~i---tG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 216 VPF--P----------PRLGRAEEYAALVKHICENTML---NGEVIRLDGALRMA 255 (257)
T ss_dssp SSS--S----------CSCBCHHHHHHHHHHHHHCTTC---CSCEEEESTTCCC-
T ss_pred CCC--C----------CCCCCHHHHHHHHHHHcccCCc---CCcEEEECCCccCC
Confidence 110 0 1266889999999998876443 35999999887654
No 117
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=99.77 E-value=4e-17 Score=136.18 Aligned_cols=219 Identities=12% Similarity=0.035 Sum_probs=131.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-------ccCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-------LLEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~~ 98 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++... ..++.++.+|++|.+++.++++ .+|.++|
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFV-EAGAKVTGFDQAFTQE---QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCCCSS---CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCchhhh---cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 346899999999999999999999 6899999999986531 2247889999999999988886 4677888
Q ss_pred Eeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 99 IFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 99 ~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+... .+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------------~~ 142 (250)
T 2fwm_X 81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR------------------IG 142 (250)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------------TT
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC------------------CC
Confidence 8765322 2234555568999999999999988543 1123455555543232100 00
Q ss_pred CCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHH-HHhhhCCCceeeCCchhhh
Q 042242 173 KSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYG-AVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~ 241 (303)
... |+.+|...+ .. .+ ++++++||+.++++....... .... .. .+.. .... ....
T Consensus 143 ~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~-~~~~--~~~~~~~-~~~~-~~~~----- 208 (250)
T 2fwm_X 143 MSA---YGASKAALKSLALSVGLELAGSG-VRCNVVSPGSTDTDMQRTLWV-SDDA--EEQRIRG-FGEQ-FKLG----- 208 (250)
T ss_dssp CHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCC---------------------------------------
T ss_pred Cch---HHHHHHHHHHHHHHHHHHhCccC-CEEEEEECCcccCcccccccc-ChhH--HHHHHhh-hhhc-cccc-----
Confidence 222 777766554 11 24 999999999999853221100 0000 00 0000 0000 0000
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|.++++++..+... ..|+.+++.++..
T Consensus 209 -~p~~~~~~p~dvA~~v~~l~s~~~~~-~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 209 -IPLGKIARPQEIANTILFLASDLASH-ITLQDIVVDGGST 247 (250)
T ss_dssp --------CHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTT
T ss_pred -CCCCCCcCHHHHHHHHHHHhCccccC-CCCCEEEECCCcc
Confidence 11123568899999999988664321 3468999988754
No 118
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=99.77 E-value=1.9e-17 Score=138.47 Aligned_cols=222 Identities=13% Similarity=0.052 Sum_probs=143.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
..+|+++||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++ .+|
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLV-EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 356899999999999999999999 68999999999875532 112468899999999998887765 345
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
.++|.++.... ..+..+..+.+++|+.++..+++++.....+-.+++.+++...+...
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------ 146 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH------------------ 146 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC------------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC------------------
Confidence 57787665332 22455556689999999999999988752222345555543222110
Q ss_pred CCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCc-cchhhHHHHHHH-HhhhCCCceeeCCch
Q 042242 171 VSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSL-YNFLGCLCVYGA-VCKHLNLPFVFGGTR 238 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 238 (303)
.+..+ |+.+|...+ +. .+ +++..++|+.+.++..... ... .....+.. ... ..|
T Consensus 147 ~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~--~~p------- 212 (255)
T 4eso_A 147 PGMSV---YSASKAALVSFASVLAAELLPRG-IRVNSVSPGFIDTPTKGVAGITE-AERAEFKTLGDN--ITP------- 212 (255)
T ss_dssp TTBHH---HHHHHHHHHHHHHHHHHHTGGGT-CEEEEEEECSBCCSSTTCTTSCH-HHHHHHHHHHHH--HST-------
T ss_pred CCchH---HHHHHHHHHHHHHHHHHHHhhhC-cEEEEEecCcccCcccccccCCh-hhHHHHHHHHhc--cCC-------
Confidence 00222 777776544 11 23 9999999999998532211 110 01111111 111 111
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhh
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEI 288 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~ 288 (303)
...+.+++|+|.++++++..... ..|+.+++.+|...++.++
T Consensus 213 ------~~r~~~pedvA~~v~~L~s~~~~--itG~~i~vdGG~~~~l~~~ 254 (255)
T 4eso_A 213 ------MKRNGTADEVARAVLFLAFEATF--TTGAKLAVDGGLGQKLSTA 254 (255)
T ss_dssp ------TSSCBCHHHHHHHHHHHHHTCTT--CCSCEEEESTTTTTTBCC-
T ss_pred ------CCCCcCHHHHHHHHHHHcCcCcC--ccCCEEEECCCccccCcCc
Confidence 12256889999999988765222 4569999999988776554
No 119
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=99.77 E-value=2.2e-17 Score=138.64 Aligned_cols=220 Identities=14% Similarity=0.070 Sum_probs=139.6
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCccc---c---ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEIT---A---IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~---~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|+|+||||+ |+||++++++|+ +.|++|++++|++... . .....+.++.+|++|.++++++++
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLK-EAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHH-HHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356899999999 999999999999 5799999999986411 1 112347889999999999888876
Q ss_pred -ccCceeEEeecccc--------cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccC
Q 042242 92 -LLEDVTHIFWVTWA--------SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 -~~~~V~~~~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++.++++++.....+-.+++.+|+...+...
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------- 154 (261)
T 2wyu_A 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------- 154 (261)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----------
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC----------
Confidence 45668888765321 23445556689999999999999998752111345554442222100
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+..+ |+.+|...+ +. .+ +++++++|+.++++........ ... ...+.+ ..|
T Consensus 155 --------~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~-~~~--~~~~~~--~~p- 216 (261)
T 2wyu_A 155 --------PKYNV---MAIAKAALEASVRYLAYELGPKG-VRVNAISAGPVRTVAARSIPGF-TKM--YDRVAQ--TAP- 216 (261)
T ss_dssp --------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCCCCTGGGGCTTH-HHH--HHHHHH--HST-
T ss_pred --------CCchH---HHHHHHHHHHHHHHHHHHHhhhC-cEEEEEeeCCCcCchhhhcccc-HHH--HHHHHh--cCC-
Confidence 00122 777666544 11 24 9999999999998532111000 110 011111 111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHh
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
+..+.+++|+|.++++++...... ..|+.|++.++..++..|
T Consensus 217 ------------~~~~~~~~dva~~v~~l~s~~~~~-~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 217 ------------LRRNITQEEVGNLGLFLLSPLASG-ITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp ------------TSSCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGBC--
T ss_pred ------------CCCCCCHHHHHHHHHHHcChhhcC-CCCCEEEECCCccccCCC
Confidence 112567899999999988654321 345899999987655443
No 120
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=99.77 E-value=1.6e-17 Score=142.52 Aligned_cols=218 Identities=12% Similarity=0.074 Sum_probs=137.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-------cCCCeEEEEecCCCHHHHHHHHhc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-------QSSSYCFISCDLLNPLDIKRKLTL 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-------~~~~~~~~~~D~~~~~~l~~~~~~ 92 (303)
.+++|+|+||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|++|.++++++++.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELL-ELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 4457899999999999999999999 68999999999865421 0 134688999999999999888875
Q ss_pred -------cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCccc
Q 042242 93 -------LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEK 159 (303)
Q Consensus 93 -------~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~ 159 (303)
+|.|+|+|+... ......+..+.+++|+.++.++++++... .....+++.+++...++.
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------- 165 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF-------- 165 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC--------
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC--------
Confidence 677999877432 22234445568999999999999997762 111234444443221100
Q ss_pred ccCCcCcCCCCCCCCccchHHHHHHHHH--------Hh--cCCcceEEecCCceeecCCCCccc-hhhHHHHHHHHhhhC
Q 042242 160 QVRFYDEECPRVSKSNNFYYVLEDLLKE--------KL--AGKVAWSVHRPGLLLGSSHRSLYN-FLGCLCVYGAVCKHL 228 (303)
Q Consensus 160 ~~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~--~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~ 228 (303)
+ .... |+.+|...+ .. .+ ++++++||+.++|+....... ..... ..
T Consensus 166 ---------~--~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~~~~~~------~~-- 222 (303)
T 1yxm_A 166 ---------P--LAVH---SGAARAGVYNLTKSLALEWACSG-IRINCVAPGVIYSQTAVENYGSWGQSF------FE-- 222 (303)
T ss_dssp ---------T--TCHH---HHHHHHHHHHHHHHHHHHTGGGT-EEEEEEEECSBCCTGGGTTSGGGGGGG------GT--
T ss_pred ---------C--cchh---hHHHHHHHHHHHHHHHHHhcccC-eEEEEEecCCcccchhhhhccccchHH------HH--
Confidence 0 0112 555444332 22 24 999999999999952111100 00000 00
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
. .... .....+.+++|+|.++++++...... ..|+.|++.++...+
T Consensus 223 ~---~~~~------~p~~~~~~~~dvA~~i~~l~~~~~~~-~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 223 G---SFQK------IPAKRIGVPEEVSSVVCFLLSPAASF-ITGQSVDVDGGRSLY 268 (303)
T ss_dssp T---GGGG------STTSSCBCTHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGC
T ss_pred H---HHhc------CcccCCCCHHHHHHHHHHHhCccccc-CCCcEEEECCCeecc
Confidence 0 0000 11123668899999999988654321 346899999886544
No 121
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=99.77 E-value=1.7e-17 Score=138.19 Aligned_cols=214 Identities=12% Similarity=0.095 Sum_probs=141.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALA-SKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999 68999999999875432 1134788999999999998888765
Q ss_pred -cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 148 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN------------- 148 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-------------
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-------------
Confidence 4668888765432 2244555668999999999999987654 1222355555543332111
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+..+ |+.+|...+ +. .+ +++.+++|+.+.++...... ... ...... ..|
T Consensus 149 -----~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~---~~~--~~~~~~--~~~---- 208 (247)
T 3lyl_A 149 -----PGQTN---YCAAKAGVIGFSKSLAYEVASRN-ITVNVVAPGFIATDMTDKLT---DEQ--KSFIAT--KIP---- 208 (247)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCTTTTTSC---HHH--HHHHHT--TST----
T ss_pred -----CCcHH---HHHHHHHHHHHHHHHHHHHHHcC-eEEEEEeeCcEecccchhcc---HHH--HHHHhh--cCC----
Confidence 00223 777776433 11 23 99999999999885332110 110 000111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
...+.+++|+|.++++++...... ..|+.|++.+|..+
T Consensus 209 ---------~~~~~~~~dva~~i~~l~s~~~~~-~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 209 ---------SGQIGEPKDIAAAVAFLASEEAKY-ITGQTLHVNGGMYM 246 (247)
T ss_dssp ---------TCCCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSSC
T ss_pred ---------CCCCcCHHHHHHHHHHHhCCCcCC-ccCCEEEECCCEec
Confidence 123668899999999988654332 34699999988654
No 122
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=99.77 E-value=2.1e-17 Score=138.38 Aligned_cols=218 Identities=13% Similarity=0.065 Sum_probs=142.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
.+++|+++||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFA-KAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHH-HHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3457899999999999999999999 68999999999865432 113578889999999998888776
Q ss_pred -ccCceeEEeecccc---cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 -LLEDVTHIFWVTWA---SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 -~~~~V~~~~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.|+.... ..+..+....+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 154 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN------------- 154 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-------------
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-------------
Confidence 45678888765432 2344555668999999999999998654 1223355555543232110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+..+ |+.+|...+ +. .+ +++..++|+.+.++..... .... ....+.. ..|
T Consensus 155 -----~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~---~~~~-~~~~~~~--~~p---- 215 (256)
T 3gaf_A 155 -----VRMAS---YGSSKAAVNHLTRNIAFDVGPMG-IRVNAIAPGAIKTDALATV---LTPE-IERAMLK--HTP---- 215 (256)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCHHHHHH---CCHH-HHHHHHT--TCT----
T ss_pred -----CCchH---HHHHHHHHHHHHHHHHHHHhhhC-cEEEEEEEccccCchhhhc---cCHH-HHHHHHh--cCC----
Confidence 00223 777766554 11 23 9999999999987421100 0000 0001111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccH
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTW 285 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~ 285 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|...++
T Consensus 216 ---------~~r~~~~~dva~~~~~L~s~~~~~-itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 216 ---------LGRLGEAQDIANAALFLCSPAAAW-ISGQVLTVSGGGVQEL 255 (256)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSCCC-
T ss_pred ---------CCCCCCHHHHHHHHHHHcCCcccC-ccCCEEEECCCccccC
Confidence 123668899999999988654322 4469999999987664
No 123
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=99.77 E-value=1.1e-17 Score=139.44 Aligned_cols=215 Identities=14% Similarity=0.087 Sum_probs=138.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.... . ...+++++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFV-EEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCcEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 456899999999999999999999 68999999999865422 1 114788999999999998888775
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCc-cEEEEeecccccccccCCCcccccCCcC
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KAL-KHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~-~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.|+|+++.... .....+..+.+++|+.++..+.+.+.... .+. .+++++++...|.+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------- 149 (251)
T 1zk4_A 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD------------- 149 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-------------
Confidence 6778888765322 22344455689999998888777765441 122 466666654333111
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----Hh---c--CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----KL---A--GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~~---~--~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+..+ |+.+|...+ +. . .. ++++++||+.++++..... ... .. ......
T Consensus 150 -----~~~~~---Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~----~~~-~~---~~~~~~---- 209 (251)
T 1zk4_A 150 -----PSLGA---YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL----PGA-EE---AMSQRT---- 209 (251)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS----TTH-HH---HHTSTT----
T ss_pred -----CCCcc---chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc----Cch-hh---hHHHhh----
Confidence 00223 777666544 11 1 33 9999999999998422111 000 00 000000
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
. ..+..+.+++|+|.++++++..+... ..|+.|++.++..
T Consensus 210 -~------~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 210 -K------TPMGHIGEPNDIAYICVYLASNESKF-ATGSEFVVDGGYT 249 (251)
T ss_dssp -T------CTTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred -c------CCCCCCcCHHHHHHHHHHHcCccccc-ccCcEEEECCCcc
Confidence 0 11123678899999999988654321 3358999988753
No 124
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=99.77 E-value=1.7e-17 Score=139.47 Aligned_cols=217 Identities=10% Similarity=0.071 Sum_probs=138.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
++|+|+||||+|+||++++++|+ +.|++|++++|+..... ....++.++++|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLL-AKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCEEEEeCCCchhHHHHHHHHH-HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999 68999999988765421 012468899999999999888876
Q ss_pred ccCceeEEeec------ccccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 92 LLEDVTHIFWV------TWASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 ~~~~V~~~~~~------~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.++|.|+. .....+..+..+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------- 153 (264)
T 3i4f_A 85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP----------- 153 (264)
T ss_dssp CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC-----------
T ss_pred CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC-----------
Confidence 45668888772 1222344555568999999999999998543 1122344444432111000
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+..+..+ |+.+|...+ +. .+ +++.+++|+.++++..... .... ... .
T Consensus 154 -----~~~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~---~~~~---~~~--------~ 210 (264)
T 3i4f_A 154 -----GWIYRSA---FAAAKVGLVSLTKTVAYEEAEYG-ITANMVCPGDIIGEMKEAT---IQEA---RQL--------K 210 (264)
T ss_dssp -----CCTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCCCGGGGSCC---HHHH---HHC---------
T ss_pred -----CCCCCch---hHHHHHHHHHHHHHHHHHhhhcC-cEEEEEccCCccCccchhc---cHHH---HHH--------H
Confidence 0011223 777766544 11 23 9999999999998532211 0110 000 0
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccH
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTW 285 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~ 285 (303)
... ..+..+.+++|+|+++++++...... ..|+.+++.+|....+
T Consensus 211 ~~~------~p~~r~~~~~dva~~v~~l~s~~~~~-itG~~i~vdGG~~~~~ 255 (264)
T 3i4f_A 211 EHN------TPIGRSGTGEDIARTISFLCEDDSDM-ITGTIIEVTGAVDVIH 255 (264)
T ss_dssp -------------CCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESCSCCCCC
T ss_pred hhc------CCCCCCcCHHHHHHHHHHHcCcccCC-CCCcEEEEcCceeecc
Confidence 000 11223668899999999988765332 3469999998875443
No 125
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=99.77 E-value=8.7e-18 Score=140.41 Aligned_cols=219 Identities=12% Similarity=0.079 Sum_probs=118.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALA-REGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999 68999999999865432 113467889999999999888876
Q ss_pred ccCceeEEeecc---c----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccC
Q 042242 92 LLEDVTHIFWVT---W----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 ~~~~V~~~~~~~---~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|.++.. . ...+.....+.+++|+.++..+++++... ..+..+++.+++...|...
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 155 (253)
T 3qiv_A 86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS---------- 155 (253)
T ss_dssp CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC----------
Confidence 566788887652 1 12344555568999999987777776543 1122345555543333100
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHHH---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKEK---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
+.+..++.+.+.+...+ .... +++.+++|+.++++...... .. .....+ ..+
T Consensus 156 ---------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~-~~~~~~---------~~~-- 211 (253)
T 3qiv_A 156 ---------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT---PK-EMVDDI---------VKG-- 211 (253)
T ss_dssp -------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------------
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC---cH-HHHHHH---------hcc--
Confidence 01111222322222222 1222 99999999999985322110 00 000000 011
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
..+..+.+++|+|.++++++...... ..|+.|++.+|..++
T Consensus 212 ----~~~~~~~~~~dva~~~~~l~s~~~~~-~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 212 ----LPLSRMGTPDDLVGMCLFLLSDEASW-ITGQIFNVDGGQIIR 252 (253)
T ss_dssp ------------CCHHHHHHHHHHSGGGTT-CCSCEEEC-------
T ss_pred ----CCCCCCCCHHHHHHHHHHHcCccccC-CCCCEEEECCCeecC
Confidence 11122446788899998888654321 346999999987654
No 126
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=99.77 E-value=1.5e-17 Score=139.52 Aligned_cols=210 Identities=13% Similarity=0.049 Sum_probs=136.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhc-------cCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTL-------LEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~ 97 (303)
++|+||||||+|+||++++++|+ +.|++|++++|+..+.. ....++.++.+|++|.+++.++++. +|.++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 104 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLL-EHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV 104 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHH-HTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 46899999999999999999999 68999999999876532 1223588999999999998887763 56688
Q ss_pred EEeeccccc---CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 98 HIFWVTWAS---QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 98 ~~~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
|.|+..... ....+....+++|+.++.++++++... ..+..+++.+++...+.+. .+
T Consensus 105 ~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------------~~ 166 (260)
T 3gem_A 105 HNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS------------------SK 166 (260)
T ss_dssp ECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC------------------SS
T ss_pred ECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC------------------CC
Confidence 887654322 223344468999999999999988764 2223455555543332110 00
Q ss_pred CCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhh
Q 042242 173 KSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (303)
... |+.+|...+ +..+ +++.+++|+.+..+..... .. ...... ..|
T Consensus 167 ~~~---Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~t~~~~~~-----~~--~~~~~~--~~p------------ 221 (260)
T 3gem_A 167 HIA---YCATKAGLESLTLSFAARFAPL-VKVNGIAPALLMFQPKDDA-----AY--RANALA--KSA------------ 221 (260)
T ss_dssp CHH---HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECTTCC------------------------CC------------
T ss_pred cHh---HHHHHHHHHHHHHHHHHHHCCC-CEEEEEeecccccCCCCCH-----HH--HHHHHh--cCC------------
Confidence 223 787776544 2234 9999999999987421110 00 000000 111
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
+..+.+++|+|.++++++...... |+.+++.+|..++
T Consensus 222 -~~r~~~~edva~~v~~L~~~~~it---G~~i~vdGG~~~~ 258 (260)
T 3gem_A 222 -LGIEPGAEVIYQSLRYLLDSTYVT---GTTLTVNGGRHVK 258 (260)
T ss_dssp -SCCCCCTHHHHHHHHHHHHCSSCC---SCEEEESTTTTTC
T ss_pred -CCCCCCHHHHHHHHHHHhhCCCCC---CCEEEECCCcccC
Confidence 112457889999999998554443 5999999987654
No 127
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=99.77 E-value=1.5e-17 Score=139.96 Aligned_cols=214 Identities=12% Similarity=0.039 Sum_probs=129.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|+.|.++++++++
T Consensus 12 l~~k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFA-GFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 356899999999999999999999 68999999999865422 012468889999999998888774
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.|+|+++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...|...
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------ 158 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA------------ 158 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC------------
Confidence 45678998765322 2234455568999999999999988543 1123455555543232110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+..+ |+.+|...+ +. .+ ++++++||+.++++....... ... ...+ .
T Consensus 159 ------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~--~~~--~~~~---------~ 215 (266)
T 1xq1_A 159 ------SVGSI---YSATKGALNQLARNLACEWASDG-IRANAVAPAVIATPLAEAVYD--DEF--KKVV---------I 215 (266)
T ss_dssp --------CCH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEECCSCC------------------------------
T ss_pred ------CCCch---HHHHHHHHHHHHHHHHHHHhHhC-cEEEEEeeCCCccchhhhhcC--HHH--HHHH---------H
Confidence 01223 777766554 11 24 999999999999953221100 000 0000 0
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.. ..+..+.+++|+|+++++++..+... ..|+.|++.++..
T Consensus 216 ~~------~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 216 SR------KPLGRFGEPEEVSSLVAFLCMPAASY-ITGQTICVDGGLT 256 (266)
T ss_dssp --------------CCGGGGHHHHHHHTSGGGTT-CCSCEEECCCCEE
T ss_pred hc------CCCCCCcCHHHHHHHHHHHcCccccC-ccCcEEEEcCCcc
Confidence 00 11112567888999998887654221 3458999998854
No 128
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=99.77 E-value=5.3e-17 Score=136.45 Aligned_cols=216 Identities=12% Similarity=0.017 Sum_probs=139.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
+++|+||||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|++|.++++++++ .+|
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALD-KAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 346899999999999999999999 68999999999865432 112267889999999999888887 567
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-ccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KA-LKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~-~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
.++|.++.... ..+..+..+.+++|+.++.++++++.... .. ..+++.+++...+.+.
T Consensus 89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 153 (263)
T 3ak4_A 89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA--------------- 153 (263)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------------
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC---------------
Confidence 78998765321 22344555689999999999999887641 11 3455555543222100
Q ss_pred CCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhh----H-----HHHHHHHhhhC
Q 042242 168 CPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLG----C-----LCVYGAVCKHL 228 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~----~-----~~~~~~~~~~~ 228 (303)
+ +..+ |+.+|...+ +. .+ ++++++||+.++++.... ... . -.....+..
T Consensus 154 -~--~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~-- 221 (263)
T 3ak4_A 154 -P--LLAH---YSASKFAVFGWTQALAREMAPKN-IRVNCVCPGFVKTAMQER---EIIWEAELRGMTPEAVRAEYVS-- 221 (263)
T ss_dssp -T--TCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBTTHHHHH---HHHHHHHHHTSCHHHHHHHHHH--
T ss_pred -C--Cchh---HHHHHHHHHHHHHHHHHHHhHcC-eEEEEEecccccChhhhh---hccccccccccCcHHHHHHHHh--
Confidence 0 0223 777766443 11 24 999999999998742110 000 0 000000100
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
.. ....+.+++|+|.++++++..+... ..|+.|++.++..+
T Consensus 222 ~~-------------p~~~~~~~~dvA~~v~~l~s~~~~~-~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 222 LT-------------PLGRIEEPEDVADVVVFLASDAARF-MTGQGINVTGGVRM 262 (263)
T ss_dssp TC-------------TTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESSSSSC
T ss_pred cC-------------CCCCCcCHHHHHHHHHHHhCccccC-CCCCEEEECcCEeC
Confidence 11 1223678999999999988654321 34589999988543
No 129
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=99.77 E-value=8.6e-17 Score=136.47 Aligned_cols=222 Identities=12% Similarity=0.039 Sum_probs=141.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc------------c-------ccCCCeEEEEecCCCHHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT------------A-------IQSSSYCFISCDLLNPLDI 86 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~------------~-------~~~~~~~~~~~D~~~~~~l 86 (303)
+.+|++|||||+|+||++++++|+ +.|++|++++|++... . ....++.++++|++|.+++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALA-EAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 356899999999999999999999 6899999999974320 0 1134688899999999998
Q ss_pred HHHHh-------ccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeeccccccccc
Q 042242 87 KRKLT-------LLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQ 153 (303)
Q Consensus 87 ~~~~~-------~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~ 153 (303)
+++++ .+|.++|.|+... ...+..+..+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 165 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN- 165 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC-
Confidence 88776 4667888876543 22344555668999999999999987553 1122355555543332111
Q ss_pred CCCcccccCCcCcCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccc---hhhH---
Q 042242 154 GLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYN---FLGC--- 217 (303)
Q Consensus 154 ~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~---~~~~--- 217 (303)
.+..+ |+.+|...+ +. .+ +++.+++|+.|+++....... +...
T Consensus 166 -----------------~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 224 (281)
T 3s55_A 166 -----------------FAQAS---YVSSKWGVIGLTKCAAHDLVGYG-ITVNAVAPGNIETPMTHNDFVFGTMRPDLEK 224 (281)
T ss_dssp -----------------TTCHH---HHHHHHHHHHHHHHHHHHTGGGT-EEEEEEEECSBCSTTTSSHHHHHC-------
T ss_pred -----------------CCCch---hHHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCcccCccccchhhhccccccccc
Confidence 00223 777776544 11 23 999999999999854321100 0000
Q ss_pred --HHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 218 --LCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
............ .....+.+++|+|.++++++...... ..|+.+++.+|...+
T Consensus 225 ~~~~~~~~~~~~~~-------------~~~~~~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 225 PTLKDVESVFASLH-------------LQYAPFLKPEEVTRAVLFLVDEASSH-ITGTVLPIDAGATAR 279 (281)
T ss_dssp CCHHHHHHHHHHHC-------------SSSCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGG
T ss_pred cchhHHHHHHHhhh-------------ccCcCCCCHHHHHHHHHHHcCCcccC-CCCCEEEECCCcccC
Confidence 000000000000 11134678999999999988765432 346899999987654
No 130
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=99.77 E-value=7.9e-18 Score=142.24 Aligned_cols=217 Identities=12% Similarity=0.004 Sum_probs=137.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC-Ccccc-----c--cCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARK-PEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+ +.... . ...++.++.+|++|.+++.++++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELG-RRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 456899999999999999999999 689999999994 32211 0 13467889999999999888887
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccccc-ccccCCCcccccCCcC
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHY-VSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y-~~~~~~~g~~~~~~~~ 165 (303)
.+|.|+|+++.... ..+..+..+.+++|+.++.++++++.....+-.+++.+++...| .+.
T Consensus 98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 164 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI------------- 164 (274)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC-------------
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC-------------
Confidence 56668888765322 23344455689999999999999887652111455555543332 110
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccc-hhh----HH--HHHH-HHhhh
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYN-FLG----CL--CVYG-AVCKH 227 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~-~~~----~~--~~~~-~~~~~ 227 (303)
.+..+ |+.+|...+ + . .+ ++++++||+.++++....... +.. .. .... .+..
T Consensus 165 -----~~~~~---Y~~sK~a~~~~~~~~~~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (274)
T 1ja9_A 165 -----PNHAL---YAGSKAAVEGFCRAFAVDCGAKG-VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN- 234 (274)
T ss_dssp -----CSCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH-
T ss_pred -----CCCch---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh-
Confidence 00223 777766554 1 1 24 999999999998742110000 000 00 0000 0000
Q ss_pred CCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 228 LNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+ .....+.+++|+|+++++++..+... ..|+.|+++++.
T Consensus 235 -~-------------~~~~~~~~~~dva~~i~~l~~~~~~~-~~G~~~~v~gG~ 273 (274)
T 1ja9_A 235 -M-------------NPLKRIGYPADIGRAVSALCQEESEW-INGQVIKLTGGG 273 (274)
T ss_dssp -T-------------STTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTC
T ss_pred -c-------------CCCCCccCHHHHHHHHHHHhCccccc-ccCcEEEecCCc
Confidence 0 12234678999999999988754321 235899998873
No 131
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=99.77 E-value=2.5e-17 Score=137.31 Aligned_cols=216 Identities=15% Similarity=0.073 Sum_probs=135.6
Q ss_pred CCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc---cCc
Q 042242 23 REVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL---LED 95 (303)
Q Consensus 23 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~---~~~ 95 (303)
.....+|+||||||+|+||++++++|+ +.|++|++++|+..+.. ....++.++.+|+.+.+++.++++. +|.
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLH-KLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 334467899999999999999999999 68999999999875532 1235788999999999999999884 556
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
++|.|+.... .....+..+.+++|+.++.++++++... ..+..+++.+++...|.+.
T Consensus 88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------- 150 (249)
T 3f9i_A 88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN----------------- 150 (249)
T ss_dssp EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------------
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------------
Confidence 8888765332 1223334458999999999998887654 1222355555543232110
Q ss_pred CCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 170 RVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
.+...|+.+|...+ +. .+ +++.+++|+.+.++...... ... ...+.. .
T Consensus 151 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~---~~~--~~~~~~--~---------- 208 (249)
T 3f9i_A 151 ----PGQANYCASKAGLIGMTKSLSYEVATRG-ITVNAVAPGFIKSDMTDKLN---EKQ--REAIVQ--K---------- 208 (249)
T ss_dssp ----SCSHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBC------CC---HHH--HHHHHH--H----------
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHHHcC-cEEEEEecCccccCcccccC---HHH--HHHHHh--c----------
Confidence 01122787776444 11 23 99999999999874322110 110 000111 1
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|.++++++..+... ..|+.|++.+|..
T Consensus 209 ---~~~~~~~~~~dva~~~~~l~s~~~~~-~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 209 ---IPLGTYGIPEDVAYAVAFLASNNASY-ITGQTLHVNGGML 247 (249)
T ss_dssp ---CTTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSS
T ss_pred ---CCCCCCcCHHHHHHHHHHHcCCccCC-ccCcEEEECCCEe
Confidence 11223667899999999988765332 3468999998764
No 132
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=99.77 E-value=3.6e-17 Score=137.95 Aligned_cols=226 Identities=10% Similarity=0.015 Sum_probs=144.1
Q ss_pred CCCCCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhc--
Q 042242 23 REVDAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTL-- 92 (303)
Q Consensus 23 ~~~~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~-- 92 (303)
.....+|+||||||+ |+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACK-REGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHH-HcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 344567999999999 999999999999 68999999999853221 1234588999999999998888874
Q ss_pred -----cCceeEEeecccc--------c-CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcc
Q 042242 93 -----LEDVTHIFWVTWA--------S-QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 93 -----~~~V~~~~~~~~~--------~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~ 158 (303)
+|.++|.|+.... . .+..+....+++|+.++..+++++.....+-.+++.+++...+...
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------ 161 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI------ 161 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC------
Confidence 3568888765432 1 3455556789999999999999988763222344444443222110
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHH-HhhhC
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHL 228 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~ 228 (303)
.+... |+.+|...+ ..... +++.+++|+.|..+..... ........ ...
T Consensus 162 ------------~~~~~---Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~~~~~~-- 220 (271)
T 3ek2_A 162 ------------PNYNT---MGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI----KSFGKILDFVES-- 220 (271)
T ss_dssp ------------TTTTH---HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC----HHHHHHHHHHHH--
T ss_pred ------------CCccc---hhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc----cchHHHHHHHHh--
Confidence 00223 777665544 11122 9999999999987432211 11111111 111
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHH
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWP 290 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~ 290 (303)
..| +..+.+++|+|.++++++...... ..|+.+++.+|...++.++.+
T Consensus 221 ~~~-------------~~~~~~pedva~~i~~l~s~~~~~-~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 221 NSP-------------LKRNVTIEQVGNAGAFLLSDLASG-VTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp HST-------------TSSCCCHHHHHHHHHHHHSGGGTT-CCSEEEEESTTGGGBCCCC--
T ss_pred cCC-------------cCCCCCHHHHHHHHHHHcCcccCC-eeeeEEEECCCeeeehhhhhh
Confidence 111 122567899999999988754322 446999999999888887754
No 133
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=99.76 E-value=6.3e-17 Score=136.04 Aligned_cols=214 Identities=15% Similarity=0.104 Sum_probs=140.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----cCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----QSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+..+... ...++.++.+|++|.++++++++ .+|
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 88 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLV-GQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD 88 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 356899999999999999999999 689999999998765321 13468899999999999988887 567
Q ss_pred ceeEEeeccccc----------CChHHHHHHHHHHHHHHHHHHHHHhhcc--C------CccEEEEeecccccccccCCC
Q 042242 95 DVTHIFWVTWAS----------QFASDMHKCCEQNKAMMCNALNAILPRA--K------ALKHVSLQTGMKHYVSLQGLP 156 (303)
Q Consensus 95 ~V~~~~~~~~~~----------~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~------~~~~~~~~s~~~~y~~~~~~~ 156 (303)
.|+|+++..... ....+..+.+++|+.++.++++++.... . +..+++.+++...+...
T Consensus 89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---- 164 (265)
T 2o23_A 89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---- 164 (265)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----
T ss_pred EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC----
Confidence 788987654221 2344555689999999999999987651 1 34566666654333111
Q ss_pred cccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhh
Q 042242 157 EEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCK 226 (303)
Q Consensus 157 g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 226 (303)
.+... |+.+|...+ +. .+ +++++++|+.+.++..... . ... ...+..
T Consensus 165 --------------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~-~--~~~--~~~~~~ 221 (265)
T 2o23_A 165 --------------VGQAA---YSASKGGIVGMTLPIARDLAPIG-IRVMTIAPGLFGTPLLTSL-P--EKV--CNFLAS 221 (265)
T ss_dssp --------------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCC---------------CHHHH
T ss_pred --------------CCCch---hHHHHHHHHHHHHHHHHHHhhcC-cEEEEEEeccccCcccccc-C--HHH--HHHHHH
Confidence 00223 777766443 11 23 9999999999987422110 0 000 000000
Q ss_pred hCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 227 HLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
..|. + ..+.+++|+|.++++++.++... |+.+++.++..++
T Consensus 222 --~~~~--~----------~~~~~~~dva~~~~~l~~~~~~~---G~~i~vdgG~~~~ 262 (265)
T 2o23_A 222 --QVPF--P----------SRLGDPAEYAHLVQAIIENPFLN---GEVIRLDGAIRMQ 262 (265)
T ss_dssp --TCSS--S----------CSCBCHHHHHHHHHHHHHCTTCC---SCEEEESTTCCCC
T ss_pred --cCCC--c----------CCCCCHHHHHHHHHHHhhcCccC---ceEEEECCCEecC
Confidence 1111 0 12568899999999988665443 4899998886543
No 134
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=99.76 E-value=7.6e-17 Score=137.77 Aligned_cols=219 Identities=10% Similarity=0.001 Sum_probs=142.5
Q ss_pred CCCCEEEEEcCCC--hhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTG--LVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+.+|+||||||+| +||++++++|+ ..|++|++++|+..... .....+.++++|++|.++++++++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVC-AQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578999999998 99999999999 68999999999864321 1123567899999999998888764
Q ss_pred --cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccC
Q 042242 93 --LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 --~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.|+... ...+..+..+.+++|+.++.++++++.....+-.+++.+++...+...
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~---------- 176 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV---------- 176 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC----------
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC----------
Confidence 466888876532 234455566789999999999999998763333345555543222110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHH-HHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVY-GAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 232 (303)
..... |+.+|...+ ..... +++..++|+.|..+..... ...... ..... ..|
T Consensus 177 --------~~~~~---Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~----~~~~~~~~~~~~--~~p- 238 (296)
T 3k31_A 177 --------PHYNV---MGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI----SDFHYILTWNKY--NSP- 238 (296)
T ss_dssp --------TTTTH---HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC----HHHHHHHHHHHH--HST-
T ss_pred --------CCchh---hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc----cchHHHHHHHHh--cCC-
Confidence 00223 777665444 11122 9999999999998532211 111100 11111 112
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHH
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWK 286 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~ 286 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|..++..
T Consensus 239 ------------~~r~~~pedvA~~v~fL~s~~a~~-itG~~i~vdGG~~~~~~ 279 (296)
T 3k31_A 239 ------------LRRNTTLDDVGGAALYLLSDLGRG-TTGETVHVDCGYHVVGM 279 (296)
T ss_dssp ------------TSSCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGCSS
T ss_pred ------------CCCCCCHHHHHHHHHHHcCCccCC-ccCCEEEECCCccccCC
Confidence 112557899999999988654322 45689999988765543
No 135
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=99.76 E-value=6.1e-17 Score=137.19 Aligned_cols=228 Identities=13% Similarity=0.025 Sum_probs=143.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc------------ccc-------ccCCCeEEEEecCCCHHH
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE------------ITA-------IQSSSYCFISCDLLNPLD 85 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~------------~~~-------~~~~~~~~~~~D~~~~~~ 85 (303)
.+.+|+||||||+|+||++++++|+ +.|++|++++|+.. ... ....++.++++|++|.++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLA-ADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHH-HCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 3457899999999999999999999 68999999998732 100 113478899999999999
Q ss_pred HHHHHh-------ccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCC
Q 042242 86 IKRKLT-------LLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGL 155 (303)
Q Consensus 86 l~~~~~-------~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~ 155 (303)
++++++ .+|.++|.|+.........+..+.+++|+.++..+++++.... ..-.+++.+++...+.+.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 165 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV--- 165 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC---
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC---
Confidence 888886 5677889887655444555566789999999999999976641 112355555543332111
Q ss_pred CcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHh
Q 042242 156 PEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVC 225 (303)
Q Consensus 156 ~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~ 225 (303)
.. + ..+...|+.+|...+ +. .+ +++..++|+.|.++..... .... ......
T Consensus 166 ---------~~--~---~~~~~~Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~--~~~~--~~~~~~ 226 (278)
T 3sx2_A 166 ---------GS--A---DPGSVGYVAAKHGVVGLMRVYANLLAGQM-IRVNSIHPSGVETPMINNE--FTRE--WLAKMA 226 (278)
T ss_dssp ---------CC--S---SHHHHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESCBSSTTTSSH--HHHH--HHHHHH
T ss_pred ---------cc--C---CCCchHhHHHHHHHHHHHHHHHHHHhccC-cEEEEEecCCccCccchhh--hHHH--HHhhcc
Confidence 00 0 011223777776544 12 23 9999999999998532211 1001 010111
Q ss_pred hhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 226 KHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 226 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.. .......+.. .. ..+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 227 ~~-~~~~~~~~~~----~p-~~~~~p~dvA~~v~~l~s~~~~~-itG~~i~vdGG~~ 276 (278)
T 3sx2_A 227 AA-TDTPGAMGNA----MP-VEVLAPEDVANAVAWLVSDQARY-ITGVTLPVDAGFL 276 (278)
T ss_dssp HH-CC--CTTSCS----SS-CSSBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTTT
T ss_pred ch-hhhhhhhhhh----cC-cCcCCHHHHHHHHHHHhCccccc-ccCCEEeECCCcc
Confidence 10 0000000100 11 34678999999999988654322 4468999988854
No 136
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=99.76 E-value=2.8e-17 Score=139.14 Aligned_cols=221 Identities=10% Similarity=0.040 Sum_probs=142.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------cc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LL 93 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~ 93 (303)
.+++|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++++|++|.++++++++ .+
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFA-KNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3457899999999999999999999 68999999999865432 123568889999999999888776 45
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
|.++|.|+.... ..+..+..+.+++|+.++..+++++.... .+..+++.+++...+...
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 167 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI--------------- 167 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC---------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC---------------
Confidence 668888765322 23345555688999999999999886541 223355555543332110
Q ss_pred CCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccc-hhhHHHHHHHHhhhCCCceeeCC
Q 042242 168 CPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYN-FLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.+...|+.+|...+ +. .+ +++.+++|+.+.++....... ............. .
T Consensus 168 ------~~~~~Y~asKaa~~~l~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~------- 231 (277)
T 4dqx_A 168 ------ADRTAYVASKGAISSLTRAMAMDHAKEG-IRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNA--R------- 231 (277)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHT--T-------
T ss_pred ------CCChhHHHHHHHHHHHHHHHHHHhhhcC-eEEEEEeeCcCcCchhhhhcccccchhHHHHHHHh--c-------
Confidence 11122777776554 22 23 999999999998732000000 0000000000000 1
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
.....+.+++|+|.++++++...... ..|+.+++.+|..++
T Consensus 232 ------~~~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 232 ------AVMDRMGTAEEIAEAMLFLASDRSRF-ATGSILTVDGGSSIG 272 (277)
T ss_dssp ------STTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESSSSSSC
T ss_pred ------CcccCCcCHHHHHHHHHHHhCCccCC-CcCCEEEECCchhhh
Confidence 11223668899999999988655432 346899999987654
No 137
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=99.76 E-value=2.3e-17 Score=138.46 Aligned_cols=219 Identities=11% Similarity=0.004 Sum_probs=139.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-------cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-------QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++..... ...++.++.+|++|.++++++++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELA-SLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999 689999999998654320 12367889999999998888774
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+|+...+...
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 153 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV------------ 153 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC------------
Confidence 46668888765322 2334455568999999999999988653 1223456665553232110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHH-HHHHhhhCCCcee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCV-YGAVCKHLNLPFV 233 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 233 (303)
.+..+ |+.+|...+ +. .+ +++++++|+.+.++........ ..... ...+.. ..|
T Consensus 154 ------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~--~~~-- 218 (260)
T 2ae2_A 154 ------PYEAV---YGATKGAMDQLTRCLAFEWAKDN-IRVNGVGPGVIATSLVEMTIQD-PEQKENLNKLID--RCA-- 218 (260)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHTGGGT-EEEEEEEECSBCSHHHHHHTTS-HHHHHHHHHHHH--TST--
T ss_pred ------CCcch---HHHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCCCCCcchhhhccC-hhhHHHHHHHHh--cCC--
Confidence 00223 777776554 11 23 9999999999987421100000 00000 001111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
...+.+++|+|.++++++..+... ..|+.+++.++...+
T Consensus 219 -----------~~~~~~~~dvA~~v~~l~s~~~~~-~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 219 -----------LRRMGEPKELAAMVAFLCFPAASY-VTGQIIYVDGGLMAN 257 (260)
T ss_dssp -----------TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGC
T ss_pred -----------CCCCCCHHHHHHHHHHHcCccccC-CCCCEEEECCCcccc
Confidence 123678899999999887654321 345899998886543
No 138
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=99.76 E-value=5.8e-17 Score=136.35 Aligned_cols=217 Identities=8% Similarity=0.034 Sum_probs=138.0
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
++|+|+||||+ |+||++++++|+ +.|++|++++|++.... .......++.+|++|.++++++++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMH-REGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35899999999 999999999999 68999999999862110 111345788999999999888876
Q ss_pred ccCceeEEeecccc--------c-CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccC
Q 042242 92 LLEDVTHIFWVTWA--------S-QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 ~~~~V~~~~~~~~~--------~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|.|+.... . .+..+..+.+++|+.++.++++++.....+-.+++.+++...+...
T Consensus 87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------- 156 (265)
T 1qsg_A 87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---------- 156 (265)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------
T ss_pred CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC----------
Confidence 34568888765321 1 3444555689999999999999998762212345555543222110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.+..+ |+.+|...+ ..... +++.+++|+.++++..... ...... ...+.. ..|
T Consensus 157 --------~~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~--~~~~~~--~~p-- 218 (265)
T 1qsg_A 157 --------PNYNV---MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKM--LAHCEA--VTP-- 218 (265)
T ss_dssp --------TTTTH---HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHH--HHHHHH--HST--
T ss_pred --------CCchH---HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cccHHH--HHHHHh--cCC--
Confidence 00223 777766554 11122 9999999999998532111 000110 011111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
+..+.+++|+|.++++++..+... ..|+.|++.++...+
T Consensus 219 -----------~~~~~~~~dva~~v~~l~s~~~~~-~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 219 -----------IRRTVTIEDVGNSAAFLCSDLSAG-ISGEVVHVDGGFSIA 257 (265)
T ss_dssp -----------TSSCCCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTGGGB
T ss_pred -----------CCCCCCHHHHHHHHHHHhCchhcC-ccCCEEEECCCcCCC
Confidence 112568899999999988654321 345899999886654
No 139
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=99.76 E-value=3.4e-17 Score=139.69 Aligned_cols=242 Identities=16% Similarity=0.073 Sum_probs=149.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhcc---CceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTLL---EDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~---~~V~~ 98 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+..+.. ....+++++.+|++|.++++++++.+ |.++|
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELA-RRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 457899999999999999999999 68999999999876532 12346889999999999999999855 56888
Q ss_pred Eeeccccc--CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCcc
Q 042242 99 IFWVTWAS--QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNN 176 (303)
Q Consensus 99 ~~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~ 176 (303)
.|+..... .+.......+++|+.++.++++++..... .+++.+++...|.+... ......+..+ ..+.
T Consensus 93 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~riv~isS~~~~~~~~~-----~~~~~~~~~~---~~~~ 162 (291)
T 3rd5_A 93 NAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT--DRVVTVSSMAHWPGRIN-----LEDLNWRSRR---YSPW 162 (291)
T ss_dssp CCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE--EEEEEECCGGGTTCCCC-----SSCTTCSSSC---CCHH
T ss_pred CCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hheeEeechhhccCCCC-----cccccccccC---CCCc
Confidence 87653221 12233334899999999999999987632 25666665545422211 0111111111 1223
Q ss_pred chHHHHHHHHH---------Hhc-CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhc
Q 042242 177 FYYVLEDLLKE---------KLA-GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYC 245 (303)
Q Consensus 177 ~~y~~~k~~~e---------~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 245 (303)
..|+.+|...+ +.. +. +++..++||.|..+...... .... ..+. ..+ . .
T Consensus 163 ~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~---~~~~--~~~~---~~~----~--------~ 222 (291)
T 3rd5_A 163 LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG---RKLG--DALM---SAA----T--------R 222 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc---hHHH--HHHH---HHH----H--------H
Confidence 34888777554 222 22 88999999999764221110 0000 0000 001 0 0
Q ss_pred ccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc---------------cHHhhHHHHHHHhcccCC
Q 042242 246 LDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF---------------TWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 246 ~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~---------------s~~e~~~~i~~~~g~~~~ 301 (303)
....+++++|.++++++..+.. .|+.|++.++..- -.+++++...+.+|...+
T Consensus 223 ~~~~~~~~~A~~~~~l~~~~~~---~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~ 290 (291)
T 3rd5_A 223 VVATDADFGARQTLYAASQDLP---GDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTEFP 290 (291)
T ss_dssp --CHHHHHHHHHHHHHHHSCCC---TTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCCCC
T ss_pred HHhCCHHHHHHHHHHHHcCCCC---CCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHccccC
Confidence 1134688999999999887543 3588877654321 133567777777776544
No 140
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=99.76 E-value=1.1e-16 Score=134.48 Aligned_cols=210 Identities=13% Similarity=0.081 Sum_probs=137.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-------ccCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-------LLEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~~ 98 (303)
+++|+||||||+|+||++++++|+ +.|++|++++|++.. ..++.++.+|++|.++++++++ .+|.++|
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFV-DEGSKVIDLSIHDPG----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESSCCC----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEecCccc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456899999999999999999999 689999999998754 2468889999999999888776 4677888
Q ss_pred Eeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 99 IFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 99 ~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
.++..... .+..+..+.+++|+.++.++++++.... .+..+++.+|+...+... .+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------~~ 142 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT------------------KN 142 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC------------------TT
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC------------------CC
Confidence 87653321 2444555689999999999998887651 223456666553333110 00
Q ss_pred CCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhh-----HH----HHHHHHhhhCCCceee
Q 042242 173 KSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLG-----CL----CVYGAVCKHLNLPFVF 234 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~ 234 (303)
..+ |+.+|...+ +... +++++++|+.+.++... .... .. .....+.. .
T Consensus 143 ~~~---Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~----- 208 (264)
T 2dtx_A 143 ASA---YVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVR---KAAELEVGSDPMRIEKKISEWGH--E----- 208 (264)
T ss_dssp BHH---HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHH---HHHHHHHCSCHHHHHHHHHHHHH--H-----
T ss_pred chh---HHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchh---hhhhcccccCchhhHHHHHHHHh--c-----
Confidence 122 777766554 2223 89999999998763110 0000 00 00000000 0
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.....+.+++|+|.++++++..+... ..|+.+++.++.
T Consensus 209 --------~p~~~~~~p~dvA~~v~~l~s~~~~~-~tG~~i~vdGG~ 246 (264)
T 2dtx_A 209 --------HPMQRIGKPQEVASAVAFLASREASF-ITGTCLYVDGGL 246 (264)
T ss_dssp --------STTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTG
T ss_pred --------CCCCCCcCHHHHHHHHHHHhCchhcC-CCCcEEEECCCc
Confidence 11223678999999999988654321 345889988875
No 141
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=99.76 E-value=3.7e-17 Score=139.41 Aligned_cols=215 Identities=13% Similarity=0.055 Sum_probs=141.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+.+|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFA-KEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356899999999999999999999 68999999999875321 113468889999999998888776
Q ss_pred -ccCceeEEeeccccc-----CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 -LLEDVTHIFWVTWAS-----QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 -~~~~V~~~~~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.|+..... .+..+..+.+++|+.++.++++++.....+-.+++.+++...|.+..
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 191 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE------------ 191 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT------------
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC------------
Confidence 456688887653322 24455566899999999999999987633334566665543431110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+... |+.+|...+ +. .+ +++..++|+.|+++...... .. .....+. ..
T Consensus 192 ------~~~~---Y~asKaa~~~l~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~~---~~-~~~~~~~--~~------ 249 (291)
T 3ijr_A 192 ------TLID---YSATKGAIVAFTRSLSQSLVQKG-IRVNGVAPGPIWTPLIPSSF---DE-KKVSQFG--SN------ 249 (291)
T ss_dssp ------TCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCSTHHHHHS---CH-HHHHHTT--TT------
T ss_pred ------CChh---HHHHHHHHHHHHHHHHHHHhhcC-EEEEEEeeCCCcCCcccccC---CH-HHHHHHH--cc------
Confidence 0122 777766544 11 24 99999999999884210000 00 0000000 01
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
..+..+.+++|+|.++++++...... ..|+.+++.+|..+
T Consensus 250 -------~p~~r~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 250 -------VPMQRPGQPYELAPAYVYLASSDSSY-VTGQMIHVNGGVIV 289 (291)
T ss_dssp -------STTSSCBCGGGTHHHHHHHHSGGGTT-CCSCEEEESSSCCC
T ss_pred -------CCCCCCcCHHHHHHHHHHHhCCccCC-CcCCEEEECCCccc
Confidence 11223567888999999988654322 34689999888654
No 142
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=99.76 E-value=7.6e-17 Score=135.93 Aligned_cols=215 Identities=13% Similarity=0.094 Sum_probs=138.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
++|+++||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLH-DAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-TTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999 78999999986544321 113568899999999998888776
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.|+.... .....+....+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 169 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA------------- 169 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------------
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC-------------
Confidence 45668888765432 2244555568999999999999987653 1223455555543232111
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+... |+.+|...+ +. .+ +++.+++|+.+..+...... ... . ......
T Consensus 170 -----~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~~~~~~~---~~~-----~-----~~~~~~ 227 (269)
T 3gk3_A 170 -----FGQAN---YASAKAGIHGFTKTLALETAKRG-ITVNTVSPGYLATAMVEAVP---QDV-----L-----EAKILP 227 (269)
T ss_dssp -----TTBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCTTTTC--------------------CCSGG
T ss_pred -----CCcch---HHHHHHHHHHHHHHHHHHhhhcC-CEEEEEecCcccchhhhhhc---hhH-----H-----HHHhhh
Confidence 00122 777776443 11 23 99999999999874322110 000 0 000001
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
. .....+.+++|+|.++++++...... ..|+.+++.+|..+|
T Consensus 228 ~------~~~~~~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 228 Q------IPVGRLGRPDEVAALIAFLCSDDAGF-VTGADLAINGGMHMS 269 (269)
T ss_dssp G------CTTSSCBCHHHHHHHHHHHTSTTCTT-CCSCEEEESTTSCCC
T ss_pred c------CCcCCccCHHHHHHHHHHHhCCCcCC-eeCcEEEECCCEeCc
Confidence 1 12223568899999999888665322 446899999987653
No 143
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=99.76 E-value=1.2e-17 Score=138.81 Aligned_cols=212 Identities=18% Similarity=0.128 Sum_probs=135.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-ecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGI-ARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
+|+|+||||+|+||++++++|+ +.|++|+++ +|++.... . ...++.++.+|++|.++++++++ .
T Consensus 1 ~k~vlVTGasggiG~~la~~l~-~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLG-KAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3789999999999999999999 689999985 67644321 0 13467889999999999988887 4
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.|+|+++.... ..+..+..+.+++|+.++.++++++.+.. .+..+++.+|+...+.+. +
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~--- 146 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN----------I--- 146 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T---
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC----------C---
Confidence 6778998765432 22344555689999999999999887641 123456665553222110 0
Q ss_pred CCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
+..+ |+.+|...+ ..... ++++++||+.++++..... .... ...+.. ..|
T Consensus 147 -----~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~--~~~~~~--~~~------ 205 (244)
T 1edo_A 147 -----GQAN---YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDM--EKKILG--TIP------ 205 (244)
T ss_dssp -----TCHH---HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHH--HHHHHT--SCT------
T ss_pred -----CCcc---chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHH--HHHHhh--cCC------
Confidence 0223 777666443 11122 9999999999987421111 0110 000111 111
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|.++++++.++......|+.|++.++.
T Consensus 206 -------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 206 -------LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp -------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred -------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 1125688999999999885543322346899998874
No 144
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=99.75 E-value=5.5e-17 Score=136.75 Aligned_cols=219 Identities=11% Similarity=0.040 Sum_probs=139.7
Q ss_pred cCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 22 GREVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 22 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
......+|+||||||+|+||++++++|+ +.|++|++++|+.... ...+..+++|++|.+++.++++ .+|
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 83 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALV-RYGAKVVSVSLDEKSD---VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRID 83 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCC--C---TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCchhc---cCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3445568999999999999999999999 6899999999987653 2367788999999999888776 456
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.|+.... ..+.....+.+++|+.++..+++++... ..+..+++.+++...|...
T Consensus 84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 147 (269)
T 3vtz_A 84 ILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT---------------- 147 (269)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC----------------
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC----------------
Confidence 78888765322 2234445568899999999999987764 1123355555554333111
Q ss_pred CCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccch-----hhHHHHH-HHHhhhCCCcee
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNF-----LGCLCVY-GAVCKHLNLPFV 233 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~ 233 (303)
.+... |+.+|...+ +..+ +++.+++||.|.++........ ....... ..+.. .
T Consensus 148 --~~~~~---Y~asKaa~~~l~~~la~e~~~~-i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---- 215 (269)
T 3vtz_A 148 --KNAAA---YVTSKHALLGLTRSVAIDYAPK-IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR--Q---- 215 (269)
T ss_dssp --TTCHH---HHHHHHHHHHHHHHHHHHHTTT-EEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH--H----
T ss_pred --CCChh---HHHHHHHHHHHHHHHHHHhcCC-CEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh--c----
Confidence 00223 777766554 2234 9999999999987421100000 0000000 00000 0
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 216 ---------~p~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG~~ 254 (269)
T 3vtz_A 216 ---------HPMGRIGRPEEVAEVVAFLASDRSSF-ITGACLTVDGGLL 254 (269)
T ss_dssp ---------STTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred ---------CCCCCCcCHHHHHHHHHHHhCCccCC-CcCcEEEECCCcc
Confidence 12233668899999999988755332 4568999998864
No 145
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=99.75 E-value=8.6e-17 Score=135.55 Aligned_cols=213 Identities=14% Similarity=0.083 Sum_probs=140.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELA-AAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999 68999999998643321 113468889999999999888776
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 172 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN------------ 172 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC------------
Confidence 45668888765432 2344555568999999999999987654 1122345555543222111
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
..... |+.+|...+ +. .+ +++.+++|+.|.++... .... ..+.. ..|
T Consensus 173 ------~~~~~---Y~asK~a~~~l~~~la~e~~~~g-i~vn~v~PG~v~T~~~~-------~~~~-~~~~~--~~p--- 229 (269)
T 4dmm_A 173 ------PGQAN---YSAAKAGVIGLTKTVAKELASRG-ITVNAVAPGFIATDMTS-------ELAA-EKLLE--VIP--- 229 (269)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBTTSCSC-------HHHH-HHHGG--GCT---
T ss_pred ------CCchh---HHHHHHHHHHHHHHHHHHHhhhC-cEEEEEEECCCcCcccc-------cccH-HHHHh--cCC---
Confidence 00223 777776443 21 23 99999999999874221 1100 01111 111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
+..+.+++|+|.++++++..+......|+.+++.+|..++
T Consensus 230 ----------~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 230 ----------LGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp ----------TSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred ----------CCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence 1235688999999999987744332446999999886653
No 146
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=99.75 E-value=2.2e-17 Score=133.14 Aligned_cols=184 Identities=13% Similarity=0.040 Sum_probs=124.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc---cCceeEEeecccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHIFWVTWA 105 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~~~~~~~ 105 (303)
++|+||||+|+||++++++|+ .|++|++++|++. .+.+|+.|.++++++++. +|.|+|+++....
T Consensus 4 M~vlVtGasg~iG~~~~~~l~--~g~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 71 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE--KKAEVITAGRHSG----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATF 71 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT--TTSEEEEEESSSS----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_pred cEEEEEcCCcHHHHHHHHHHH--CCCeEEEEecCcc----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 379999999999999999997 5899999999864 467999999999999887 5779999764322
Q ss_pred ----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHH
Q 042242 106 ----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVL 181 (303)
Q Consensus 106 ----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~ 181 (303)
..+..+..+.+++|+.++.++++++.+...+-.+++.+++...+.. ..+..+ |+.
T Consensus 72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~~~~~---Y~~ 130 (202)
T 3d7l_A 72 SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP------------------IVQGAS---AAM 130 (202)
T ss_dssp CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC------------------CTTCHH---HHH
T ss_pred CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC------------------CCccHH---HHH
Confidence 1233444567899999999999999876211135555544322200 011223 777
Q ss_pred HHHHHH-----Hhc--CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHH
Q 042242 182 EDLLKE-----KLA--GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRL 253 (303)
Q Consensus 182 ~k~~~e-----~~~--~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 253 (303)
+|...+ +.. .. ++++++||+.++++.. .. .. . .....+++++|
T Consensus 131 sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~--------~~------~~--~-------------~~~~~~~~~~d 181 (202)
T 3d7l_A 131 ANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD--------KL------EP--F-------------FEGFLPVPAAK 181 (202)
T ss_dssp HHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH--------HH------GG--G-------------STTCCCBCHHH
T ss_pred HHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh--------hh------hh--h-------------ccccCCCCHHH
Confidence 766555 221 12 9999999999998421 00 00 0 11224678899
Q ss_pred HHHHHHHHhcCcCCcCCCCceEEee
Q 042242 254 VAEQHIWVATNDDISSTKGQAFNAI 278 (303)
Q Consensus 254 ~a~a~~~~~~~~~~~~~~g~~yni~ 278 (303)
+|++++.++. ... .|+.||+.
T Consensus 182 va~~~~~~~~-~~~---~G~~~~vd 202 (202)
T 3d7l_A 182 VARAFEKSVF-GAQ---TGESYQVY 202 (202)
T ss_dssp HHHHHHHHHH-SCC---CSCEEEEC
T ss_pred HHHHHHHhhh-ccc---cCceEecC
Confidence 9999888773 322 34788873
No 147
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=99.75 E-value=6e-17 Score=137.27 Aligned_cols=223 Identities=14% Similarity=0.007 Sum_probs=142.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
..+|+||||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|++|.+++.++++
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFA-REGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999 68999999999865432 1 13467888999999998888776
Q ss_pred ccCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 LLEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ~~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+-.+++.+++...+.. +
T Consensus 85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 152 (280)
T 3tox_A 85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA-----------G- 152 (280)
T ss_dssp CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB-----------C-
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC-----------C-
Confidence 45678888764321 2344555668999999999999988765 112234555544322200 0
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccch-hhHHHHHHHHhhhCCCcee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNF-LGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 233 (303)
..+..+ |+.+|...+ +. .+ +++.+++||.|.++........ .... ...+.. ..|
T Consensus 153 -----~~~~~~---Y~asKaa~~~l~~~la~e~~~~g-Irvn~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~--~~p-- 217 (280)
T 3tox_A 153 -----FAGVAP---YAASKAGLIGLVQALAVELGARG-IRVNALLPGGTDTPANFANLPGAAPET--RGFVEG--LHA-- 217 (280)
T ss_dssp -----CTTCHH---HHHHHHHHHHHHHHHHHHHHTTT-EEEEEEEECSBSSTTSGGGSTTCCTHH--HHHHHT--TST--
T ss_pred -----CCCchh---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEEECCCCCchhhhhccccCHHH--HHHHhc--cCc--
Confidence 000223 777776544 22 23 9999999999998532211100 0110 000111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhh
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEI 288 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~ 288 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|..++..-+
T Consensus 218 -----------~~r~~~pedvA~~v~~L~s~~a~~-itG~~i~vdGG~~~~~~a~ 260 (280)
T 3tox_A 218 -----------LKRIARPEEIAEAALYLASDGASF-VTGAALLADGGASVTKAAE 260 (280)
T ss_dssp -----------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGCC---
T ss_pred -----------cCCCcCHHHHHHHHHHHhCccccC-CcCcEEEECCCcccccccc
Confidence 123668899999999988764332 4469999999876554433
No 148
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=99.75 E-value=6.9e-17 Score=136.41 Aligned_cols=217 Identities=12% Similarity=0.044 Sum_probs=138.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHh------c
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLT------L 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~------~ 92 (303)
.+.+|++|||||+|+||++++++|+ +.|++|++++|.+.... ....++.++.+|++|.+++.++.+ .
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYA-RAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 3457899999999999999999999 68999999997643211 112467889999999998877654 4
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-------------- 172 (273)
T 3uf0_A 107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG-------------- 172 (273)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------------
T ss_pred CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC--------------
Confidence 6668888765432 2244555568999999999999987543 1123355555543332110
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.+... |+.+|...+ +. .+ +++..++|+.|.++..... .........+.. ..|
T Consensus 173 ----~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~--~~p----- 234 (273)
T 3uf0_A 173 ----RNVAA---YAASKHAVVGLTRALASEWAGRG-VGVNALAPGYVVTANTAAL---RADDERAAEITA--RIP----- 234 (273)
T ss_dssp ----SSCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSGGGHHH---HTSHHHHHHHHH--HST-----
T ss_pred ----CCChh---HHHHHHHHHHHHHHHHHHHhhcC-cEEEEEEeCCCcCCchhhc---ccCHHHHHHHHh--cCC-----
Confidence 00223 777776544 11 23 9999999999998422110 000000011111 111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
...+.+++|+|.++++++...... ..|+.+++.+|...
T Consensus 235 --------~~r~~~pedva~~v~~L~s~~a~~-itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 235 --------AGRWATPEDMVGPAVFLASDAASY-VHGQVLAVDGGWLA 272 (273)
T ss_dssp --------TSSCBCGGGGHHHHHHHHSGGGTT-CCSCEEEESTTGGG
T ss_pred --------CCCCCCHHHHHHHHHHHhCchhcC-CcCCEEEECcCccC
Confidence 112567788999999988654322 44689999988654
No 149
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=99.75 E-value=3.9e-17 Score=136.30 Aligned_cols=208 Identities=13% Similarity=0.022 Sum_probs=135.6
Q ss_pred cCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc-------C
Q 042242 22 GREVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL-------E 94 (303)
Q Consensus 22 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-------~ 94 (303)
.....|+|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ...+.+|++|.++++++++.+ |
T Consensus 16 ~~~~~m~k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~-----~~~~~~d~~d~~~v~~~~~~~~~~~g~iD 89 (251)
T 3orf_A 16 PRGSHMSKNILVLGGSGALGAEVVKFFK-SKSWNTISIDFRENPNA-----DHSFTIKDSGEEEIKSVIEKINSKSIKVD 89 (251)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCTTS-----SEEEECSCSSHHHHHHHHHHHHTTTCCEE
T ss_pred ccccccCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCccccc-----ccceEEEeCCHHHHHHHHHHHHHHcCCCC
Confidence 3344578999999999999999999999 68999999999876532 245778999999988888754 5
Q ss_pred ceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 95 DVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 95 ~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
.++|+++... ......+..+.+++|+.++.++++++.....+-.+++.+++...+..
T Consensus 90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------------ 151 (251)
T 3orf_A 90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR------------------ 151 (251)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------------
T ss_pred EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC------------------
Confidence 5888876432 22234455568899999999999998875322234555554323211
Q ss_pred CCCCCccchHHHHHHHHH-----Hhc-----CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 170 RVSKSNNFYYVLEDLLKE-----KLA-----GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e-----~~~-----~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
..+...|+.+|...+ +.. .. +++.+++|+.|.++. . .. .. +.
T Consensus 152 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~---~----~~------~~---------~~-- 204 (251)
T 3orf_A 152 ---TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT---N----RK------YM---------SD-- 204 (251)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---H----HH------HC---------TT--
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---h----hh------hc---------cc--
Confidence 111122888777655 121 23 999999999887621 0 01 00 01
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
..+..+.+++|+|+++++++..+......|+.+++..++..+
T Consensus 205 ----~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~~ 246 (251)
T 3orf_A 205 ----ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKVT 246 (251)
T ss_dssp ----SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTEE
T ss_pred ----ccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCccc
Confidence 111235688999999999987722222456899998776543
No 150
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.75 E-value=3.8e-17 Score=136.78 Aligned_cols=221 Identities=10% Similarity=-0.021 Sum_probs=138.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHHHh-------ccCce
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRKLT-------LLEDV 96 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V 96 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++..... .... .++.+|++|.++++++++ .+|.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFA-REGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 346899999999999999999999 689999999998765111 0113 788999999998888776 45678
Q ss_pred eEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 97 THIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 97 ~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
+|.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+. +
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------------~- 144 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------------Q- 144 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------------T-
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------------C-
Confidence 888765322 2234445568999999999999987654 2233456665543222110 0
Q ss_pred CCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhh
Q 042242 171 VSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREI 240 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (303)
+..+ |+.+|...+ +. .+ +++.+++|+.+.++.. ..... ...............
T Consensus 145 -~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~-------~~~~~-~~~~~~~~~~~~~~~---- 207 (256)
T 2d1y_A 145 -ENAA---YNASKGGLVNLTRSLALDLAPLR-IRVNAVAPGAIATEAV-------LEAIA-LSPDPERTRRDWEDL---- 207 (256)
T ss_dssp -TBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHH-------HHHHC---------CHHHHTT----
T ss_pred -CChh---HHHHHHHHHHHHHHHHHHHhhcC-eEEEEEeeCCccCchh-------hhccc-cccCCHHHHHHHHhc----
Confidence 0122 777766554 11 23 9999999999876310 00000 000000000000000
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccH
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTW 285 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~ 285 (303)
.....+.+++|+|+++++++..+... ..|+.|++.++...++
T Consensus 208 --~~~~~~~~~~dvA~~~~~l~s~~~~~-~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 208 --HALRRLGKPEEVAEAVLFLASEKASF-ITGAILPVDGGMTASF 249 (256)
T ss_dssp --STTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGBC
T ss_pred --CCCCCCcCHHHHHHHHHHHhCchhcC-CCCCEEEECCCccccc
Confidence 12234678999999999988654321 3458999999876544
No 151
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=99.75 E-value=9.6e-17 Score=134.44 Aligned_cols=216 Identities=11% Similarity=0.038 Sum_probs=138.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-ecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhcc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGI-ARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTLL----- 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~~----- 93 (303)
++|+||||||+|+||++++++|+ +.|++|+++ .|+..... ....++.++.+|++|.++++++++.+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~-~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLA-ENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999 689998887 66654321 11346889999999999988887654
Q ss_pred --CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 94 --EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 94 --~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
|.++|.|+.... ..+..+....+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------- 148 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL------------- 148 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC-------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC-------------
Confidence 668888764322 2334455568999999999999988654 1122344444443222110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+... |+.+|...+ +. .+ +++..++|+.+.++...... ........... ..|
T Consensus 149 -----~~~~~---Y~asKaa~~~l~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~--~~p---- 210 (258)
T 3oid_A 149 -----ENYTT---VGVSKAALEALTRYLAVELSPKQ-IIVNAVSGGAIDTDALKHFP---NREDLLEDARQ--NTP---- 210 (258)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHTGGGT-EEEEEEEECCBCSGGGGGCT---THHHHHHHHHH--HCT----
T ss_pred -----CCcHH---HHHHHHHHHHHHHHHHHHHhhcC-cEEEEEeeCCCcChhhhhcc---cCHHHHHHHHh--cCC----
Confidence 00223 777776554 11 23 99999999999874322110 01000111111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
...+.+++|+|.++++++...... ..|+.+++.+|....
T Consensus 211 ---------~~r~~~~~dva~~v~~L~s~~~~~-itG~~i~vdGG~~~~ 249 (258)
T 3oid_A 211 ---------AGRMVEIKDMVDTVEFLVSSKADM-IRGQTIIVDGGRSLL 249 (258)
T ss_dssp ---------TSSCBCHHHHHHHHHHHTSSTTTT-CCSCEEEESTTGGGB
T ss_pred ---------CCCCcCHHHHHHHHHHHhCcccCC-ccCCEEEECCCccCC
Confidence 123668899999999988765332 456999999887544
No 152
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=99.75 E-value=5.5e-17 Score=136.15 Aligned_cols=220 Identities=10% Similarity=-0.023 Sum_probs=134.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|++|.++++++++ .+|
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFA-KGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 356899999999999999999999 68999999999876532 123578899999999999888876 456
Q ss_pred ceeEEeeccccc-----CChHHHHHHHHHHHHHHHHHHHHHhhccC------CccEEEEeecccccccccCCCcccccCC
Q 042242 95 DVTHIFWVTWAS-----QFASDMHKCCEQNKAMMCNALNAILPRAK------ALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 95 ~V~~~~~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~------~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.++|.++..... .+..+..+.+++|+.++.++++++..... ...+++.+++...+...
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 154 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR----------- 154 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC-----------
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC-----------
Confidence 688887654311 23445556899999999999888776511 12345555543222000
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
..... |+.+|...+ +. .+ +++..++|+.+.++........... ... ...
T Consensus 155 -------~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~~~~~~-----~~~-----~~~ 213 (261)
T 3n74_A 155 -------PNLAW---YNATKGWVVSVTKALAIELAPAK-IRVVALNPVAGETPLLTTFMGEDSE-----EIR-----KKF 213 (261)
T ss_dssp -------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEEC--------------------------------
T ss_pred -------CCccH---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEecCcccChhhhhhcccCcH-----HHH-----HHH
Confidence 00122 777666544 11 23 9999999999988432211000000 000 000
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccH
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTW 285 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~ 285 (303)
... .....+.+++|+|.++++++...... ..|+.+++.++..++.
T Consensus 214 ~~~------~~~~~~~~~~dva~~~~~l~s~~~~~-itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 214 RDS------IPMGRLLKPDDLAEAAAFLCSPQASM-ITGVALDVDGGRSIGG 258 (261)
T ss_dssp ---------CTTSSCCCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTTTC--
T ss_pred hhc------CCcCCCcCHHHHHHHHHHHcCCcccC-cCCcEEEecCCcccCC
Confidence 011 12234678999999999988644322 4569999999987654
No 153
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.75 E-value=3.7e-17 Score=139.14 Aligned_cols=235 Identities=11% Similarity=0.052 Sum_probs=144.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc------------c-------ccCCCeEEEEecCCCHHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT------------A-------IQSSSYCFISCDLLNPLDI 86 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~------------~-------~~~~~~~~~~~D~~~~~~l 86 (303)
+++|+||||||+|+||++++++|+ +.|++|++++|+.... . ....++.++.+|++|.+++
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLA-EEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-HCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 346899999999999999999999 6899999999873210 0 1134688999999999998
Q ss_pred HHHHh-------ccCceeEEeeccccc--CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCc
Q 042242 87 KRKLT-------LLEDVTHIFWVTWAS--QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPE 157 (303)
Q Consensus 87 ~~~~~-------~~~~V~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g 157 (303)
+++++ .+|.++|.|+..... .+..+..+.+++|+.++.++++++.....+-.+++.+++...+....
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---- 162 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA---- 162 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH----
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc----
Confidence 88776 566788887654322 33445556899999999999999987633334556655544442221
Q ss_pred ccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhh
Q 042242 158 EKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKH 227 (303)
Q Consensus 158 ~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~ 227 (303)
..+..+..+. .+...|+.+|...+ +. .+ +++..++|+.|.++..... ... ......
T Consensus 163 ---~~~~~~~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~----~~~---~~~~~~ 228 (287)
T 3pxx_A 163 ---QPPGAGGPQG---PGGAGYSYAKQLVDSYTLQLAAQLAPQS-IRANVIHPTNVNTDMLNSA----PMY---RQFRPD 228 (287)
T ss_dssp ---CCC-----CH---HHHHHHHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEESSBSSTTTSSH----HHH---HHHCTT
T ss_pred ---ccccccccCC---CccchHHHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCcccccccccc----chh---hhhccc
Confidence 1112222111 11223777776554 12 24 9999999999998532211 000 000000
Q ss_pred CCCcee------eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 228 LNLPFV------FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 228 ~~~~~~------~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
...+.. ..... .....+.+++|+|.++++++...... ..|+.+++.+|..++
T Consensus 229 ~~~~~~~~~~~~~~~~~----~~~~~~~~p~dva~~v~fL~s~~a~~-itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 229 LEAPSRADALLAFPAMQ----AMPTPYVEASDISNAVCFLASDESRY-VTGLQFKVDAGAMLK 286 (287)
T ss_dssp SSSCCHHHHHHHGGGGC----SSSCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGG
T ss_pred cccchhHHHHhhhhhhc----ccCCCCCCHHHHHhhHheecchhhcC-CCCceEeECchhhhc
Confidence 000000 00000 00023678899999999988654322 446899999986654
No 154
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=99.75 E-value=5.5e-17 Score=136.13 Aligned_cols=215 Identities=16% Similarity=0.076 Sum_probs=137.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec-CCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIAR-KPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+.+|+|+||||+|+||++++++|+ +.|++|++++| ++.... . ...++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFA-TEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356899999999999999999999 68999999999 543221 0 12457889999999998888776
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-ccEEEEeecccccccccCCCcccccCC
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KA-LKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~-~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.|+|+++.... ..+..+..+.+++|+.++.++++++.... .. ..+++.+|+...+.
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~------------- 150 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI------------- 150 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-------------
Confidence 56778998765322 22344555689999999999988877651 11 34555555432220
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+..+..+ |+.+|...+ +. .+ ++++++||+.++++.... ..........+.. ..|
T Consensus 151 -----~~~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~--~~~-- 214 (261)
T 1gee_A 151 -----PWPLFVH---YAASKGGMKLMTETLALEYAPKG-IRVNNIGPGAINTPINAE---KFADPEQRADVES--MIP-- 214 (261)
T ss_dssp -----CCTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCSGGGHH---HHHSHHHHHHHHT--TCT--
T ss_pred -----CCCCccH---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEeeCCcCCchhhh---cccChhHHHHHHh--cCC--
Confidence 0011223 887775443 11 23 999999999999842110 0000000011111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|.++++++...... ..|+.+++.++..
T Consensus 215 -----------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~~ 251 (261)
T 1gee_A 215 -----------MGYIGEPEEIAAVAAWLASSEASY-VTGITLFADGGMT 251 (261)
T ss_dssp -----------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred -----------CCCCcCHHHHHHHHHHHhCccccC-CCCcEEEEcCCcc
Confidence 123668899999999988654221 3458999988754
No 155
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=99.75 E-value=4.7e-17 Score=136.15 Aligned_cols=221 Identities=14% Similarity=0.091 Sum_probs=137.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---c--cCCCeEEEEecCCCHHHHHHHHh-------cc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---I--QSSSYCFISCDLLNPLDIKRKLT-------LL 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~--~~~~~~~~~~D~~~~~~l~~~~~-------~~ 93 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.... . ...++.++.+|++|.++++++++ .+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLA-RAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV 80 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 346899999999999999999999 68999999999875211 1 12457888999999999988887 66
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
|.++|.++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+...
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 145 (255)
T 2q2v_A 81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS--------------- 145 (255)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC---------------
Confidence 778898765322 2234455568999999888777776543 1223455555553333110
Q ss_pred CCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHH---H-HHhhhCCCceee
Q 042242 168 CPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVY---G-AVCKHLNLPFVF 234 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~ 234 (303)
+ +... |+.+|...+ ..... +++++++|+.++++... ......... . ..... +..
T Consensus 146 -~--~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~----~~~ 212 (255)
T 2q2v_A 146 -T--GKAA---YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ---KQIDDRAANGGDPLQAQHD----LLA 212 (255)
T ss_dssp -T--TBHH---HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH---HHHHHHHHHTCCHHHHHHH----HHT
T ss_pred -C--Cchh---HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh---hhcccccccccchHHHHHH----HHh
Confidence 0 0122 777666544 11122 99999999999884211 000000000 0 00000 000
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.. .....+.+++|+|.++++++..+... ..|+.|++.++..
T Consensus 213 ~~------~p~~~~~~~~dvA~~~~~l~s~~~~~-~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 213 EK------QPSLAFVTPEHLGELVLFLCSEAGSQ-VRGAAWNVDGGWL 253 (255)
T ss_dssp TT------CTTCCCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTGG
T ss_pred cc------CCCCCCcCHHHHHHHHHHHhCCccCC-CCCCEEEECCCcc
Confidence 00 11223678999999999887654322 3358999988743
No 156
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.75 E-value=2.3e-17 Score=141.10 Aligned_cols=234 Identities=10% Similarity=0.001 Sum_probs=148.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCC---CeEEEEecCCCHHHHHHHHh-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSS---SYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~---~~~~~~~D~~~~~~l~~~~~----- 91 (303)
++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. . ... ++.++.+|++|.++++++++
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFA-KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999 68999999999865432 0 112 68889999999998888776
Q ss_pred --ccCceeEEeecccc------cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCccccc
Q 042242 92 --LLEDVTHIFWVTWA------SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 92 --~~~~V~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
.+|.++|.|+.... .....+..+.+++|+.++.++++++.... .+ .+++.+++...+...
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~--------- 173 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA--------- 173 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC---------
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC---------
Confidence 46778888765322 22345556689999999999999887651 22 466666553332110
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHH-HHHHHhhhCCC
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLC-VYGAVCKHLNL 230 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~ 230 (303)
.+ +... |+.+|...+ +. .+ +++++++|+.+.++....... ..... ...........
T Consensus 174 ------~~--~~~~---Y~asKaa~~~l~~~la~el~~~g-I~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (297)
T 1xhl_A 174 ------HS--GYPY---YACAKAALDQYTRCTAIDLIQHG-VRVNSVSPGAVATGFMGAMGL-PETASDKLYSFIGSRKE 240 (297)
T ss_dssp ------CT--TSHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBCSSHHHHTTC-CHHHHHHHHHHHHHCTT
T ss_pred ------CC--Ccch---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEeeCCCcCcccccccc-ccccccchHHHHHHHHh
Confidence 00 0122 777666544 11 24 999999999998742110000 00000 00001110000
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCc-CCcCCCCceEEeecCCCccHHhhHHHHHHHh
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATND-DISSTKGQAFNAINGPRFTWKEIWPSIGKKF 296 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~-~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~ 296 (303)
. .....+.+++|+|.++++++..+ ... ..|+.+++.++..+.+.+.+..+.+++
T Consensus 241 ~-----------~p~~r~~~pedvA~~v~~l~s~~~~~~-itG~~i~vdGG~~~~~~~~~~~~~~~~ 295 (297)
T 1xhl_A 241 C-----------IPVGHCGKPEEIANIIVFLADRNLSSY-IIGQSIVADGGSTLVMGMQTHDLMSVL 295 (297)
T ss_dssp T-----------CTTSSCBCHHHHHHHHHHHHCHHHHTT-CCSCEEEESTTGGGCCGGGGSCHHHHT
T ss_pred c-----------CCCCCCcCHHHHHHHHHHHhCCcccCC-ccCcEEEECCCccccccccccchhhhh
Confidence 0 01123678899999999988654 211 345899999998888787666655543
No 157
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=99.75 E-value=1.6e-17 Score=138.22 Aligned_cols=210 Identities=15% Similarity=0.103 Sum_probs=128.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEe-cCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIA-RKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
++|+|+||||+|+||++++++|+ +.|++|++++ |++.... . ...++.++.+|++|.++++++++
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~-~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLG-NMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999 6899999994 5543321 0 13468889999999999888876
Q ss_pred ccCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeeccc-ccccccCCCcccccCCc
Q 042242 92 LLEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMK-HYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ~~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~-~y~~~~~~~g~~~~~~~ 164 (303)
.+|.|+|+++..... .+..+..+.+++|+.++.++++++... ..+..+++.+++.. .|+.+
T Consensus 83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 150 (247)
T 2hq1_A 83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------ 150 (247)
T ss_dssp CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------
Confidence 567789987653211 122333458899999999988887754 11234555554421 22110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+..+ |+.+|...+ .. .+ +++++++|+.+.++..... . ... ...+.. ..|
T Consensus 151 -------~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~-~--~~~--~~~~~~--~~~--- 209 (247)
T 2hq1_A 151 -------GQAN---YAASKAGLIGFTKSIAKEFAAKG-IYCNAVAPGIIKTDMTDVL-P--DKV--KEMYLN--NIP--- 209 (247)
T ss_dssp --------CHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHTS-C--HHH--HHHHHT--TST---
T ss_pred -------CCcH---hHHHHHHHHHHHHHHHHHHHHcC-cEEEEEEEEEEeccchhhc-c--hHH--HHHHHh--hCC---
Confidence 0223 777776544 11 23 8999999999876321110 0 010 000111 111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|+++++++..+... ..|+.||+.++.
T Consensus 210 ----------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gG~ 245 (247)
T 2hq1_A 210 ----------LKRFGTPEEVANVVGFLASDDSNY-ITGQVINIDGGL 245 (247)
T ss_dssp ----------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTC
T ss_pred ----------CCCCCCHHHHHHHHHHHcCccccc-ccCcEEEeCCCc
Confidence 123668899999999887654321 235899998875
No 158
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=99.75 E-value=2.2e-17 Score=139.78 Aligned_cols=221 Identities=14% Similarity=0.083 Sum_probs=141.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
+++|+||||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++ .+|
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLA-DEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 456899999999999999999999 68999999999865432 113568899999999998888776 456
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.|+.... ..+..+..+.+++|+.++..+++++... ..+-.+++.+++...+.+
T Consensus 106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~----------------- 168 (277)
T 3gvc_A 106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA----------------- 168 (277)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------------
Confidence 68888765332 2345555668999999999999988764 122334555544322211
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
..+...|+.+|...+ .. .+ +++.+++|+.|.++.......... . ........
T Consensus 169 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~t~~~~~~~~~~~------------~-~~~~~~~~ 230 (277)
T 3gvc_A 169 ----VGGTGAYGMSKAGIIQLSRITAAELRSSG-IRSNTLLPAFVDTPMQQTAMAMFD------------G-ALGAGGAR 230 (277)
T ss_dssp ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHHHHTCC-------------------CCHH
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHhcccC-eEEEEEeeCCccCchHHHhhhcch------------h-hHHHHhhh
Confidence 011122777776544 11 23 999999999998742110000000 0 00000000
Q ss_pred h-hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 239 E-IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 239 ~-~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
. .. .....+.+++|+|.++++++...... ..|+.+++.+|...+
T Consensus 231 ~~~~-~~~~r~~~pedvA~~v~~L~s~~a~~-itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 231 SMIA-RLQGRMAAPEEMAGIVVFLLSDDASM-ITGTTQIADGGTIAA 275 (277)
T ss_dssp HHHH-HHHSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGS
T ss_pred hhhh-ccccCCCCHHHHHHHHHHHcCCccCC-ccCcEEEECCcchhc
Confidence 0 00 22334678999999999988654322 446899999886554
No 159
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=99.75 E-value=7.3e-17 Score=134.37 Aligned_cols=213 Identities=17% Similarity=0.133 Sum_probs=139.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
.++|+++||||+|+||++++++|+ +.|++|++++|++.... ........+.+|++|.++++++++ .+|
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLA-ERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 356899999999999999999999 68999999999865432 112357789999999999888877 567
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------- 149 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN---------------- 149 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC----------------
Confidence 78888765432 2244555668999999999999988653 1122345555543222110
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
.+..+ |+.+|...+ +. .+ +++..++|+.+..+..... .... ...... ..|
T Consensus 150 --~~~~~---Y~asK~a~~~l~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~----~~~~-~~~~~~--~~p------- 209 (248)
T 3op4_A 150 --AGQAN---YAAAKAGVIGFTKSMAREVASRG-VTVNTVAPGFIETDMTKAL----NDEQ-RTATLA--QVP------- 209 (248)
T ss_dssp --TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBSSTTTTTS----CHHH-HHHHHH--TCT-------
T ss_pred --CCChH---HHHHHHHHHHHHHHHHHHHHHhC-eEEEEEeeCCCCCchhhhc----CHHH-HHHHHh--cCC-------
Confidence 00223 777776443 22 23 9999999999987432211 0100 000111 111
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 210 ------~~r~~~p~dva~~v~~L~s~~~~~-itG~~i~vdgG~~ 246 (248)
T 3op4_A 210 ------AGRLGDPREIASAVAFLASPEAAY-ITGETLHVNGGMY 246 (248)
T ss_dssp ------TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSS
T ss_pred ------CCCCcCHHHHHHHHHHHcCCccCC-ccCcEEEECCCee
Confidence 122568899999999888654322 3468999988753
No 160
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=99.75 E-value=1.9e-17 Score=138.30 Aligned_cols=216 Identities=12% Similarity=0.047 Sum_probs=136.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----cCCCe-EEEEecCCCHHHHHHHHh------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----QSSSY-CFISCDLLNPLDIKRKLT------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~-~~~~~D~~~~~~l~~~~~------~~~ 94 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+... ...++ .++.+|++|.++++++++ .+|
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFA-ASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCc
Confidence 346899999999999999999999 689999999998654321 11245 788999999999888774 456
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.|+|+++.... ........+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 151 (254)
T 2wsb_A 88 ILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------------- 151 (254)
T ss_dssp EEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC----------------
Confidence 78898765332 1233444568899999988888776543 1123456665553333110
Q ss_pred CCCCCCccchHHHHHHHHHH---------h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKEK---------L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e~---------~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
+ ..+...|+.+|...+. . .+ ++++++||+.++++.... ....-.....+.. ..|
T Consensus 152 ~---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g-i~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~--~~~------- 215 (254)
T 2wsb_A 152 R---PQFASSYMASKGAVHQLTRALAAEWAGRG-VRVNALAPGYVATEMTLK---MRERPELFETWLD--MTP------- 215 (254)
T ss_dssp S---SSCBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCSHHHHH---HHTCHHHHHHHHH--TST-------
T ss_pred C---CCcchHHHHHHHHHHHHHHHHHHHHhhcC-eEEEEEEecccCchhhhc---cccChHHHHHHHh--cCC-------
Confidence 1 1111227777765541 1 14 999999999999842110 0000000011111 111
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|+++++++..+... ..|+.|++.++.
T Consensus 216 ------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gG~ 251 (254)
T 2wsb_A 216 ------MGRCGEPSEIAAAALFLASPAASY-VTGAILAVDGGY 251 (254)
T ss_dssp ------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTG
T ss_pred ------CCCCCCHHHHHHHHHHHhCccccc-ccCCEEEECCCE
Confidence 123678899999999988654321 345889988773
No 161
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=99.75 E-value=3.4e-17 Score=141.62 Aligned_cols=227 Identities=10% Similarity=0.063 Sum_probs=147.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC----------Ccccc-------ccCCCeEEEEecCCCHHHHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARK----------PEITA-------IQSSSYCFISCDLLNPLDIKRK 89 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~----------~~~~~-------~~~~~~~~~~~D~~~~~~l~~~ 89 (303)
.+|+||||||+|+||++++++|+ +.|++|++++|+ ..... ....++.++.+|++|.+++.++
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la-~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFA-AEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 46899999999999999999999 689999999987 22211 1124577889999999998887
Q ss_pred Hh-------ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCC--------ccEEEEeecccccc
Q 042242 90 LT-------LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKA--------LKHVSLQTGMKHYV 150 (303)
Q Consensus 90 ~~-------~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--------~~~~~~~s~~~~y~ 150 (303)
++ .+|.++|.|+.... ..+..+..+.+++|+.++..+++++...... -.+++.+++...+.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 76 45678888765432 2344555668999999999999987654110 12555555433331
Q ss_pred cccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHH
Q 042242 151 SLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCV 220 (303)
Q Consensus 151 ~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~ 220 (303)
+.. .... |+.+|...+ +. .+ +++..++|+ +..+...... ....
T Consensus 185 ~~~------------------~~~~---Y~asKaal~~l~~~la~e~~~~g-I~vn~v~PG-~~t~~~~~~~---~~~~- 237 (322)
T 3qlj_A 185 GSV------------------GQGN---YSAAKAGIATLTLVGAAEMGRYG-VTVNAIAPS-ARTRMTETVF---AEMM- 237 (322)
T ss_dssp CBT------------------TCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEEC-TTSCCSCCSC---CC---
T ss_pred CCC------------------CCcc---HHHHHHHHHHHHHHHHHHhcccC-cEEEEecCC-CCCccchhhh---hhhh-
Confidence 110 0223 777766544 11 23 999999998 5442111110 0000
Q ss_pred HHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc-----------------
Q 042242 221 YGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF----------------- 283 (303)
Q Consensus 221 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~----------------- 283 (303)
..+ .......+++|+|.++++++...... ..|+.|++.+|...
T Consensus 238 --------~~~-----------~~~~~~~~pedva~~v~~L~s~~~~~-itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~ 297 (322)
T 3qlj_A 238 --------ATQ-----------DQDFDAMAPENVSPLVVWLGSAEARD-VTGKVFEVEGGKIRVAEGWAHGPQIDKGARW 297 (322)
T ss_dssp -------------------------CCTTCGGGTHHHHHHHTSGGGGG-CCSCEEEEETTEEEEEECCEEEEEEECSSCC
T ss_pred --------hcc-----------ccccCCCCHHHHHHHHHHHhCccccC-CCCCEEEECCCccccCCCcccccccCccCCC
Confidence 000 11122457788999998887654322 34689999887754
Q ss_pred cHHhhHHHHHHHhcccCC
Q 042242 284 TWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 284 s~~e~~~~i~~~~g~~~~ 301 (303)
+..|+++.+.+.+|.+.|
T Consensus 298 ~~~el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 298 DPAELGPVVADLLGKARP 315 (322)
T ss_dssp CGGGHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHhhccCC
Confidence 779999999999987544
No 162
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.75 E-value=3.9e-17 Score=137.13 Aligned_cols=215 Identities=14% Similarity=0.045 Sum_probs=140.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--c-CCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--Q-SSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~-~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+..+.. . . ..++.++.+|++|.++++++++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFA-RAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 346899999999999999999999 68999999999875532 1 1 1468899999999999888776
Q ss_pred -ccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.|+... ...+..+..+.+++|+.++.++++++... ..+..+++.+++...+. .+
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~- 154 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI-----------TG- 154 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT-----------BC-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc-----------CC-
Confidence 5677888876532 22244555568999999999999988765 11223455544321110 00
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
..+..+ |+.+|...+ +. .+ +++.+++|+.++++..... ... ....+.+ ..|
T Consensus 155 -----~~~~~~---Y~asK~a~~~l~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~---~~~--~~~~~~~--~~p--- 215 (262)
T 3pk0_A 155 -----YPGWSH---YGATKAAQLGFMRTAAIELAPHK-ITVNAIMPGNIMTEGLLEN---GEE--YIASMAR--SIP--- 215 (262)
T ss_dssp -----CTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCCHHHHTT---CHH--HHHHHHT--TST---
T ss_pred -----CCCChh---hHHHHHHHHHHHHHHHHHHHhhC-cEEEEEEeCcCcCcccccc---CHH--HHHHHHh--cCC---
Confidence 000223 777766554 11 24 9999999999998421111 011 0111111 112
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
...+.+++|+|.++++++...... ..|+.+++.+|..+
T Consensus 216 ----------~~r~~~p~dva~~v~~L~s~~~~~-itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 216 ----------AGALGTPEDIGHLAAFLATKEAGY-ITGQAIAVDGGQVL 253 (262)
T ss_dssp ----------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTTC
T ss_pred ----------CCCCcCHHHHHHHHHHHhCccccC-CcCCEEEECCCeec
Confidence 112568899999999988654322 44689999988754
No 163
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=99.75 E-value=9.6e-17 Score=133.35 Aligned_cols=212 Identities=15% Similarity=0.100 Sum_probs=138.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-----ccCceeEEee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-----LLEDVTHIFW 101 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-----~~~~V~~~~~ 101 (303)
++|+||||||+|+||++++++|++..|+.|++++|++... ...+.++.+|++|.++++++++ .+|.++|.|+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg 79 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAG 79 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCc
Confidence 4579999999999999999999943788999999886521 3467899999999999998886 4456888876
Q ss_pred ccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccc
Q 042242 102 VTW----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNF 177 (303)
Q Consensus 102 ~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~ 177 (303)
... ...+..+..+.+++|+.++..+++++.....+-.+++.+++...+... ....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------------~~~~ 138 (244)
T 4e4y_A 80 ILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK---------------------PNSF 138 (244)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC---------------------TTBH
T ss_pred cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC---------------------CCCc
Confidence 532 233455556689999999999999988762211345555443232110 0112
Q ss_pred hHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHH---------HHHHHhhhCCCceeeCCch
Q 042242 178 YYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLC---------VYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 178 ~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~ 238 (303)
.|+.+|...+ .. .+ +++.+++|+.|.++... ....... ...... ..
T Consensus 139 ~Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~--------- 203 (244)
T 4e4y_A 139 AYTLSKGAIAQMTKSLALDLAKYQ-IRVNTVCPGTVDTDLYR---NLIQKYANNVGISFDEAQKQEE--KE--------- 203 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEESCBCCHHHH---HHHHHHHHHHTCCHHHHHHHHH--TT---------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcC-eEEEEEecCccCchhhH---HHHHhhhhhcCCCHHHHHHHHh--hc---------
Confidence 2777766554 11 23 99999999999873211 0000000 000000 01
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|.++++++..+... ..|+.+++.+|..
T Consensus 204 ----~p~~r~~~p~dvA~~v~~l~s~~~~~-itG~~i~vdGG~~ 242 (244)
T 4e4y_A 204 ----FPLNRIAQPQEIAELVIFLLSDKSKF-MTGGLIPIDGGYT 242 (244)
T ss_dssp ----STTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred ----CCCCCCcCHHHHHHHHHHHhcCcccc-ccCCeEeECCCcc
Confidence 11223668899999999988755332 3468999988753
No 164
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=99.75 E-value=6.6e-17 Score=137.47 Aligned_cols=211 Identities=13% Similarity=0.117 Sum_probs=135.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
++|+|+||||+|+||+++++.|+ +.|++|++++|++.+.. . ...++.++.+|++|.++++++++ .
T Consensus 43 ~~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLA-KSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHT-TTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999 68999999888754421 1 13467889999999999888875 3
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.|+|+++.... .....+..+.+++|+.++.++++++... ..+..+++.+|+...+.+.
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------- 187 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-------------- 187 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC--------------
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC--------------
Confidence 5668888765422 2344555568999999988888887653 1123456665553332111
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+ +..+ |+.+|...+ .. .+ ++++++||+.+.++..... .... ...... ..|
T Consensus 188 --~--~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~---~~~~--~~~~~~--~~~----- 247 (285)
T 2c07_A 188 --V--GQAN---YSSSKAGVIGFTKSLAKELASRN-ITVNAIAPGFISSDMTDKI---SEQI--KKNIIS--NIP----- 247 (285)
T ss_dssp --T--TCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCC-----C---CHHH--HHHHHT--TCT-----
T ss_pred --C--CCch---HHHHHHHHHHHHHHHHHHHHHhC-cEEEEEEeCcEecCchhhc---CHHH--HHHHHh--hCC-----
Confidence 0 0223 777666443 11 24 9999999999988532211 0111 000111 111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|+++++++..+... ..|+.|++.++.
T Consensus 248 --------~~~~~~~~dvA~~~~~l~~~~~~~-~~G~~i~v~gG~ 283 (285)
T 2c07_A 248 --------AGRMGTPEEVANLACFLSSDKSGY-INGRVFVIDGGL 283 (285)
T ss_dssp --------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTS
T ss_pred --------CCCCCCHHHHHHHHHHHhCCCcCC-CCCCEEEeCCCc
Confidence 112668899999999988654321 345889998874
No 165
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=99.75 E-value=5.5e-17 Score=136.82 Aligned_cols=215 Identities=13% Similarity=0.056 Sum_probs=139.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+.+|+||||||+|+||++++++|+ +.|++|++++|+..... ....++..+.+|++|.++++++++
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELA-RRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999 68999999999865432 113467889999999998888776
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+-.+++.+++...+.+. +
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-- 172 (270)
T 3ftp_A 105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN----------P-- 172 (270)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T--
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC----------C--
Confidence 45678888765332 2344555668999999999999988653 1122345555543232111 0
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+..+ |+.+|...+ +. .+ +++.+++|+.|..+..... ... ....+.. ..|
T Consensus 173 ------~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~----~~~-~~~~~~~--~~p---- 231 (270)
T 3ftp_A 173 ------GQVN---YAAAKAGVAGMTRALAREIGSRG-ITVNCVAPGFIDTDMTKGL----PQE-QQTALKT--QIP---- 231 (270)
T ss_dssp ------TBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSHHHHHS----CHH-HHHHHHT--TCT----
T ss_pred ------Cchh---HHHHHHHHHHHHHHHHHHHhhhC-eEEEEEEeCCCcCcchhhc----CHH-HHHHHHh--cCC----
Confidence 0122 777776443 21 23 9999999999887311100 000 0000111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
+..+.+++|+|+++++++...... ..|+.+++.+|..+|
T Consensus 232 ---------~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 232 ---------LGRLGSPEDIAHAVAFLASPQAGY-ITGTTLHVNGGMFMS 270 (270)
T ss_dssp ---------TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSSCC
T ss_pred ---------CCCCCCHHHHHHHHHHHhCCCcCC-ccCcEEEECCCcccC
Confidence 123668899999999888544321 346899999886543
No 166
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=99.75 E-value=7.5e-17 Score=135.29 Aligned_cols=223 Identities=13% Similarity=-0.002 Sum_probs=135.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-----c----CCCeEEEEecCCCHHHHHHHHh-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-----Q----SSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~----~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+... . ..++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELA-RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 346899999999999999999999 689999999998654220 0 1268889999999999988887
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
++|.++|.++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+|+...|...
T Consensus 84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 151 (260)
T 2z1n_A 84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW------------ 151 (260)
T ss_dssp TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------
T ss_pred cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC------------
Confidence 46778888764322 2234455568999999998887777643 1123455555554333110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+..+ |+.+|...+ +. .+ +++++++|+.++++....... ..................
T Consensus 152 ------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~ 218 (260)
T 2z1n_A 152 ------QDLAL---SNIMRLPVIGVVRTLALELAPHG-VTVNAVLPSLILTDRVRSLAE---ERARRSGITVEEALKSMA 218 (260)
T ss_dssp ------TTBHH---HHHHTHHHHHHHHHHHHHHGGGT-EEEEEEEECHHHHCCCC-------------------------
T ss_pred ------CCCch---hHHHHHHHHHHHHHHHHHHhhhC-eEEEEEEECCcccchhhhhhh---hhhcccCCcHHHHHHHHH
Confidence 00112 666554333 22 23 999999999999853221000 000000000000000000
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.. ..+..+.+++|+|.++++++..+... ..|+.+++.++.
T Consensus 219 ~~------~p~~r~~~~~dva~~v~~l~s~~~~~-~tG~~i~vdGG~ 258 (260)
T 2z1n_A 219 SR------IPMGRVGKPEELASVVAFLASEKASF-ITGAVIPVDGGA 258 (260)
T ss_dssp -C------CTTSSCCCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTT
T ss_pred hc------CCCCCccCHHHHHHHHHHHhCccccC-CCCCEEEeCCCc
Confidence 00 11123568899999999988654321 346889998874
No 167
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=99.75 E-value=5.1e-17 Score=135.84 Aligned_cols=213 Identities=12% Similarity=0.046 Sum_probs=135.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----cCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----QSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+... ...++.++.+|++|.++++++++ .+|
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAV-AAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 456899999999999999999999 689999999998654321 12357888999999999888876 567
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.++.... ..+..+..+.+++|+.++..+++++.+. ..+..+++.+++...+.+.
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 145 (254)
T 1hdc_A 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---------------- 145 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC----------------
Confidence 78888765322 2334455568999999998666655443 1123455555543332110
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
.+... |+.+|...+ +. .+ ++++++||+.++++... .. ....... ....
T Consensus 146 --~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~-------~~------~~~~~~~-~~~~-- 203 (254)
T 1hdc_A 146 --ALTSS---YGASKWGVRGLSKLAAVELGTDR-IRVNSVHPGMTYTPMTA-------ET------GIRQGEG-NYPN-- 203 (254)
T ss_dssp --TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHH-------HH------TCCCSTT-SCTT--
T ss_pred --CCchh---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEecccCcCcccc-------cc------chhHHHH-HHhc--
Confidence 00223 777666544 11 23 99999999999874210 00 0000000 0000
Q ss_pred hhhhhhcccCc-cHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 239 EIWEEYCLDGS-DSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 239 ~~~~~~~~~~~-~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..+..+. +++|+|+++++++..+... ..|+.+++.++..
T Consensus 204 ----~p~~~~~~~~~dvA~~v~~l~s~~~~~-~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 204 ----TPMGRVGNEPGEIAGAVVKLLSDTSSY-VTGAELAVDGGWT 243 (254)
T ss_dssp ----STTSSCB-CHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTT
T ss_pred ----CCCCCCCCCHHHHHHHHHHHhCchhcC-CCCCEEEECCCcc
Confidence 1112256 8899999999988654321 3468999988864
No 168
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=99.74 E-value=1.5e-16 Score=134.33 Aligned_cols=218 Identities=14% Similarity=0.057 Sum_probs=135.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELA-GLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCcchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999 68999999999865422 013468889999999998887774
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.++.... .....+..+.+++|+.++.++++++... ..+..+++.+++...|...
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------ 165 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL------------ 165 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC------------
Confidence 45668888765322 2234455568899999999999988643 1123455665554333111
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhh-HHHHHHHHhhhCCCcee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLG-CLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 233 (303)
.+..+ |+.+|...+ +. .+ +++++++|+.++++.......... .......+.. ..|
T Consensus 166 ------~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~p-- 231 (273)
T 1ae1_A 166 ------PSVSL---YSASKGAINQMTKSLACEWAKDN-IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV--KTP-- 231 (273)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBC-------------CHHHHHHHHH--HST--
T ss_pred ------CCcch---hHHHHHHHHHHHHHHHHHHhhcC-cEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHh--cCC--
Confidence 00223 777766554 11 24 999999999999853221100000 0000000111 011
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|.++++++...... ..|+.+++.++..
T Consensus 232 -----------~~r~~~p~dvA~~v~~l~s~~~~~-~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 232 -----------MGRAGKPQEVSALIAFLCFPAASY-ITGQIIWADGGFT 268 (273)
T ss_dssp -----------TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred -----------CCCCcCHHHHHHHHHHHhCccccC-cCCCEEEECCCcc
Confidence 112568899999999887644321 3468999988754
No 169
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=99.74 E-value=4.7e-17 Score=138.75 Aligned_cols=215 Identities=16% Similarity=0.102 Sum_probs=138.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc--C-CCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ--S-SSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~--~-~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.+|+||||||+|+||++++++|+ +.|++|++++|+..... .. . .++.++++|++|.++++++++.
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFA-RAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 68999999999876532 11 1 4688999999999988877764
Q ss_pred -cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+. . +
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~-----~------~-- 185 (293)
T 3rih_A 119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV-----T------G-- 185 (293)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT-----B------B--
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc-----C------C--
Confidence 4668888765322 2244555668999999999999998532 11223444444321110 0 0
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
..+..+ |+.+|...+ +. .+ +++.+++|+.|+++..... ... ....+.+ ..|+
T Consensus 186 ----~~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~t~~~~~~---~~~--~~~~~~~--~~p~--- 247 (293)
T 3rih_A 186 ----YPGWSH---YGASKAAQLGFMRTAAIELAPRG-VTVNAILPGNILTEGLVDM---GEE--YISGMAR--SIPM--- 247 (293)
T ss_dssp ----CTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCCHHHHHT---CHH--HHHHHHT--TSTT---
T ss_pred ----CCCCHH---HHHHHHHHHHHHHHHHHHHhhhC-eEEEEEecCCCcCcchhhc---cHH--HHHHHHh--cCCC---
Confidence 000223 777766554 11 24 9999999999998421111 011 0011111 2221
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
..+.+++|+|.++++++...... ..|+.+++.+|..++
T Consensus 248 ----------~r~~~p~dvA~~v~fL~s~~a~~-itG~~i~vdGG~~~~ 285 (293)
T 3rih_A 248 ----------GMLGSPVDIGHLAAFLATDEAGY-ITGQAIVVDGGQVLP 285 (293)
T ss_dssp ----------SSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTTCB
T ss_pred ----------CCCCCHHHHHHHHHHHhCccccC-CCCCEEEECCCccCC
Confidence 12457889999999888654322 446899999887653
No 170
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=99.74 E-value=5.9e-17 Score=138.33 Aligned_cols=215 Identities=10% Similarity=0.015 Sum_probs=139.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYA-REGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 68999999988743211 113468889999999998877775
Q ss_pred -ccCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 -LLEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 -~~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.++.... ..+..+..+.+++|+.++.++++++.....+-.+++.+++...|...
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~------------- 193 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS------------- 193 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-------------
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-------------
Confidence 45668888765321 22445556689999999999999998763332456666554333111
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
..... |+.+|...+ +. .+ +++.+++|+.|+++........ ... . .....
T Consensus 194 -----~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~t~~~~~~~~~-~~~------~-----~~~~~ 252 (294)
T 3r3s_A 194 -----PHLLD---YAATKAAILNYSRGLAKQVAEKG-IRVNIVAPGPIWTALQISGGQT-QDK------I-----PQFGQ 252 (294)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCSHHHHTTTSC-GGG------S-----TTTTT
T ss_pred -----CCchH---HHHHHHHHHHHHHHHHHHHhhcC-eEEEEEecCcCccccccccCCC-HHH------H-----HHHHh
Confidence 00222 777766544 22 24 9999999999998421000000 000 0 00000
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
. ..+..+.+++|+|.++++++...... ..|+++++.+|..+
T Consensus 253 ~------~p~~r~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdGG~~l 293 (294)
T 3r3s_A 253 Q------TPMKRAGQPAELAPVYVYLASQESSY-VTAEVHGVCGGEHL 293 (294)
T ss_dssp T------STTSSCBCGGGGHHHHHHHHSGGGTT-CCSCEEEESTTCCC
T ss_pred c------CCCCCCcCHHHHHHHHHHHhCccccC-CCCCEEEECCCccC
Confidence 0 12223567788999999887654322 44689999998654
No 171
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=99.74 E-value=9.5e-17 Score=135.20 Aligned_cols=220 Identities=12% Similarity=0.030 Sum_probs=137.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-------c--CCCeEEEEecCCCHHHHHHHHh-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-------Q--SSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~--~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+... . ..++.++.+|++|.++++++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLA-AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999 689999999998654320 0 3468889999999999888876
Q ss_pred --ccCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccC
Q 042242 92 --LLEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 --~~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|.++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+.+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 159 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---------- 159 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC----------
Confidence 45778888764322 2234455568999999988777766543 1123455555543222110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccch-hhHH-HHHH-HHhhhCC
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNF-LGCL-CVYG-AVCKHLN 229 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~-~~~~-~~~~~~~ 229 (303)
.+..+ |+.+|...+ +. .+ +++++++|+.++++........ .... .... .+.. .
T Consensus 160 --------~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~ 225 (267)
T 1iy8_A 160 --------GNQSG---YAAAKHGVVGLTRNSAVEYGRYG-IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQ--V 225 (267)
T ss_dssp --------SSBHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHT--T
T ss_pred --------CCCcc---HHHHHHHHHHHHHHHHHHHHhcC-eEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhc--c
Confidence 00122 777666444 11 24 9999999999987421100000 0000 0000 0000 1
Q ss_pred CceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 230 LPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 230 ~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
.| +..+.+++|+|.++++++..+... ..|+.+++.++...+
T Consensus 226 ~p-------------~~r~~~~~dvA~~v~~l~s~~~~~-~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 226 NP-------------SKRYGEAPEIAAVVAFLLSDDASY-VNATVVPIDGGQSAA 266 (267)
T ss_dssp CT-------------TCSCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTTTTB
T ss_pred CC-------------CCCCcCHHHHHHHHHHHcCccccC-CCCCEEEECCCcccC
Confidence 11 123568899999999987654321 346899998886554
No 172
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=99.74 E-value=4e-16 Score=131.26 Aligned_cols=217 Identities=11% Similarity=0.111 Sum_probs=140.7
Q ss_pred CCCCEEEEEcCCCh--hHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 26 DAKNVAVIFGVTGL--VGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~--iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
+++|+|+||||+|+ ||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++.
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLH-EAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 45789999999998 9999999999 68999999999854321 1112688999999999988887764
Q ss_pred ----cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccc
Q 042242 93 ----LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 93 ----~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
+|.++|.++... ...+.......+++|+.++..+++++.....+-.+++.+++...+...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 155 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM-------- 155 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC--------
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC--------
Confidence 466888876432 223445555689999999999999998763333455555543232110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCC
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNL 230 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
..... |+.+|...+ +. .+ +++..++|+.+..+........ .. ....+.. ..
T Consensus 156 ----------~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~~~~~~~~~-~~--~~~~~~~--~~ 216 (266)
T 3oig_A 156 ----------PNYNV---MGVAKASLDASVKYLAADLGKEN-IRVNSISAGPIRTLSAKGISDF-NS--ILKDIEE--RA 216 (266)
T ss_dssp ----------TTTHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCCCSGGGTTCTTH-HH--HHHHHHH--HS
T ss_pred ----------CCcch---hHHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCcccccccccccch-HH--HHHHHHh--cC
Confidence 00122 777766544 11 23 9999999999987432211110 01 0111111 11
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
| ...+.+++|+|+++++++...... ..|+.+++.+|....
T Consensus 217 ~-------------~~~~~~p~dva~~v~~l~s~~~~~-~tG~~i~vdGG~~~~ 256 (266)
T 3oig_A 217 P-------------LRRTTTPEEVGDTAAFLFSDMSRG-ITGENLHVDSGFHIT 256 (266)
T ss_dssp T-------------TSSCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGC
T ss_pred C-------------CCCCCCHHHHHHHHHHHcCCchhc-CcCCEEEECCCeEEe
Confidence 1 112568899999999988764322 446899999886543
No 173
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=99.74 E-value=5.5e-16 Score=131.76 Aligned_cols=215 Identities=13% Similarity=0.068 Sum_probs=137.4
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCccc---c---ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEIT---A---IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~---~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
.+|+|+||||+ |+||+++++.|+ +.|++|++++|++... . ....++.++.+|++|.++++++++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFH-REGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45899999999 999999999999 6899999999986411 0 112347789999999999888776
Q ss_pred ccCceeEEeecccc--------cCChHHHHHHHHHHHHHHHHHHHHHhhccC-CccEEEEeecccccccccCCCcccccC
Q 042242 92 LLEDVTHIFWVTWA--------SQFASDMHKCCEQNKAMMCNALNAILPRAK-ALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 ~~~~V~~~~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++.++++++..... +-.+++.+++...+...
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 168 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV---------- 168 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC----------
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC----------
Confidence 45678888765422 334455556899999999999999887621 22455555543222110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.+..+ |+.+|...+ ..... +++++++|+.+.++........ ... ...+.. ..|
T Consensus 169 --------~~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~--~~~~~~--~~p-- 230 (285)
T 2p91_A 169 --------PHYNV---MGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF-HLL--MEHTTK--VNP-- 230 (285)
T ss_dssp --------TTTTH---HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH-HHH--HHHHHH--HST--
T ss_pred --------CCccH---HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch-HHH--HHHHHh--cCC--
Confidence 00223 777666554 11122 9999999999998532211000 110 011111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|.++++++...... ..|+.|++.++..
T Consensus 231 -----------~~~~~~~~dva~~~~~l~s~~~~~-~tG~~~~vdgg~~ 267 (285)
T 2p91_A 231 -----------FGKPITIEDVGDTAVFLCSDWARA-ITGEVVHVDNGYH 267 (285)
T ss_dssp -----------TSSCCCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTGG
T ss_pred -----------CCCCcCHHHHHHHHHHHcCCcccC-CCCCEEEECCCcc
Confidence 112567899999999988643321 3458899988753
No 174
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.74 E-value=2.8e-16 Score=133.22 Aligned_cols=221 Identities=12% Similarity=0.005 Sum_probs=138.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc-------------ccc-------ccCCCeEEEEecCCCHH
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE-------------ITA-------IQSSSYCFISCDLLNPL 84 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-------------~~~-------~~~~~~~~~~~D~~~~~ 84 (303)
.+++|+++||||+|+||++++++|+ +.|++|++++|+.. ... ....++.++.+|++|.+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLA-AEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 3457899999999999999999999 68999999998421 110 11346788999999999
Q ss_pred HHHHHHh-------ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccc
Q 042242 85 DIKRKLT-------LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYV 150 (303)
Q Consensus 85 ~l~~~~~-------~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~ 150 (303)
+++++++ .+|.++|.|+.... ..+..+..+.+++|+.++.++++++.... ..-.+++.+++...+.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 170 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK 170 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence 9888876 45668888765432 22445555689999999999999886541 1123455555432321
Q ss_pred cccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHH
Q 042242 151 SLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCV 220 (303)
Q Consensus 151 ~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~ 220 (303)
.. ....+ |+.+|...+ +. .+ +++.+++|+.+.++..... . ....
T Consensus 171 ~~------------------~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~--~--~~~~ 224 (280)
T 3pgx_A 171 AT------------------PGNGH---YSASKHGLTALTNTLAIELGEYG-IRVNSIHPYSVETPMIEPE--A--MMEI 224 (280)
T ss_dssp CC------------------TTBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSTTCCHH--H--HHHH
T ss_pred CC------------------CCchh---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEeeCcccCcccchh--h--hhhh
Confidence 10 00122 777766544 11 23 9999999999998532210 0 0000
Q ss_pred HHHHhhhCCCce-eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 221 YGAVCKHLNLPF-VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 221 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..... ....+ .... ... .+.+++|+|.++++++...... ..|+.+++.+|.
T Consensus 225 ~~~~~~-~~~~~~~~~~------~~~-r~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdGG~ 277 (280)
T 3pgx_A 225 FARHPS-FVHSFPPMPV------QPN-GFMTADEVADVVAWLAGDGSGT-LTGTQIPVDKGA 277 (280)
T ss_dssp HHHCGG-GGGGSCCBTT------BCS-SCBCHHHHHHHHHHHHSGGGTT-CSSCEEEESTTG
T ss_pred hhcCch-hhhhhhhccc------CCC-CCCCHHHHHHHHHHHhCccccC-CCCCEEEECCCc
Confidence 000000 00000 0011 111 3678999999999988655422 346899998874
No 175
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=99.74 E-value=3.4e-17 Score=138.67 Aligned_cols=221 Identities=10% Similarity=0.039 Sum_probs=140.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---cCCCeEEEEecCCCHHHHHHHHh-----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I---QSSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
.+++|++|||||+|+||++++++|+ +.|++|++++|+..... . ...++.++++|++|.++++++++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFM-RHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3457899999999999999999999 78999999999865421 0 13468899999999998888776
Q ss_pred --ccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCC
Q 042242 92 --LLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 --~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.++|.|+... ...+..+..+.+++|+.++.++++++.... .+..+++.+++...+.+.
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 171 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ----------- 171 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC-----------
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----------
Confidence 4566888876432 223445556689999999999999876431 112344554443222110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
..... |+.+|...+ +. .+ +++..++|+.|.++....... ........... ..|
T Consensus 172 -------~~~~~---Y~asKaa~~~l~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~--~~p-- 234 (277)
T 4fc7_A 172 -------ALQVH---AGSAKAAVDAMTRHLAVEWGPQN-IRVNSLAPGPISGTEGLRRLG--GPQASLSTKVT--ASP-- 234 (277)
T ss_dssp -------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBSSSHHHHHHS--CCHHHHHHHHH--TST--
T ss_pred -------CCcHH---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEEECCEecchhhhhcc--CCHHHHHHHhc--cCC--
Confidence 00122 777665443 22 24 999999999998731100000 00000001111 112
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHH
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWK 286 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~ 286 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|..+++.
T Consensus 235 -----------~~r~~~p~dvA~~v~fL~s~~~~~-itG~~i~vdGG~~~~~~ 275 (277)
T 4fc7_A 235 -----------LQRLGNKTEIAHSVLYLASPLASY-VTGAVLVADGGAWLTFP 275 (277)
T ss_dssp -----------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTHHHHCC
T ss_pred -----------CCCCcCHHHHHHHHHHHcCCccCC-cCCCEEEECCCcccCCC
Confidence 123568899999999988654322 45699999988765543
No 176
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=99.74 E-value=6.9e-17 Score=134.17 Aligned_cols=209 Identities=16% Similarity=0.125 Sum_probs=131.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-ecCCccccc-------cCCCeEE-EEecCCCHHHHHHHHh-------c
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGI-ARKPEITAI-------QSSSYCF-ISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~-------~~~~~~~-~~~D~~~~~~l~~~~~-------~ 92 (303)
|+|+||||+|+||++++++|+ +.|++|+++ +|++.+... ...++.. +.+|++|.++++++++ .
T Consensus 2 k~vlITGasggiG~~~a~~l~-~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLA-EDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-TTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 689999999999999999999 689999998 676543210 1235666 8999999998888765 5
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.|+|+++.... ..+..+..+.+++|+.++.++++++.+. ..+..+++.+|+...+.+. +
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~--- 147 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN----------P--- 147 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------S---
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC----------C---
Confidence 6778998765321 2234455568999999977766665543 1123456665553222110 0
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+..+ |+.+|...+ .. .+ ++++++||+.++++..... .... ...+.. ..|
T Consensus 148 -----~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~---~~~~--~~~~~~--~~~----- 206 (245)
T 2ph3_A 148 -----GQAN---YVASKAGLIGFTRAVAKEYAQRG-ITVNAVAPGFIETEMTERL---PQEV--KEAYLK--QIP----- 206 (245)
T ss_dssp -----SBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHTS---CHHH--HHHHHH--TCT-----
T ss_pred -----CCcc---hHHHHHHHHHHHHHHHHHHHHcC-eEEEEEEEEeecCcchhhc---CHHH--HHHHHh--cCC-----
Confidence 0122 777666433 11 24 9999999999988421111 0110 001111 111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|+++++++..+... ..|+.|++.++.
T Consensus 207 --------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~v~gg~ 242 (245)
T 2ph3_A 207 --------AGRFGRPEEVAEAVAFLVSEKAGY-ITGQTLCVDGGL 242 (245)
T ss_dssp --------TCSCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTC
T ss_pred --------CCCCcCHHHHHHHHHHHhCccccc-ccCCEEEECCCC
Confidence 113568899999999988654321 335899998874
No 177
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=99.74 E-value=3.6e-16 Score=132.70 Aligned_cols=221 Identities=13% Similarity=0.075 Sum_probs=137.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
++|+||||||+|+||++++++|+ +.|++|++++|+..... . ...++.++++|++|.++++++++ .
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALA-ADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999 68999999999865432 1 12468889999999998888776 4
Q ss_pred cCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 LEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.|+... ...+..+..+.+++|+.++..+++++... ..+..+++.+++...+...
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------- 172 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF------------- 172 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-------------
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC-------------
Confidence 566888876532 13344555568999999999999998543 1122344444442222000
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+..+... |+.+|...+ + .... +++..++||.+..+........ ... . . ..+.....
T Consensus 173 ---~~~~~~~---Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~---~-~----~~~~~~~~ 237 (283)
T 3v8b_A 173 ---TTPGATA---YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLR-HEE---E-T----AIPVEWPK 237 (283)
T ss_dssp ---CSTTCHH---HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBC-CHH---H-H----SCCCBCTT
T ss_pred ---CCCCchH---HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccc-cch---h-h----hhhhhhhh
Confidence 0001223 787776554 1 1122 9999999999987532211000 000 0 0 00100000
Q ss_pred chhhhhhhc--ccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYC--LDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~--~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.. ... -.+.+++|+|.++++++...... ..|+.+++.+|.
T Consensus 238 ~~----~p~~~~r~~~pedvA~~v~fL~s~~a~~-itG~~i~vdGG~ 279 (283)
T 3v8b_A 238 GQ----VPITDGQPGRSEDVAELIRFLVSERARH-VTGSPVWIDGGQ 279 (283)
T ss_dssp CS----CGGGTTCCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTH
T ss_pred hc----CccccCCCCCHHHHHHHHHHHcCccccC-CcCCEEEECcCc
Confidence 00 111 23568899999999987654322 446899998874
No 178
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=99.74 E-value=1.8e-17 Score=139.59 Aligned_cols=220 Identities=14% Similarity=0.118 Sum_probs=135.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc----CCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ----SSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. .. ..++.++.+|++|.++++++++.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALL-LKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 68999999999865421 11 23578899999999998888765
Q ss_pred --cCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC-----CccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 --LEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK-----ALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 --~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-----~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.++... ...++ +.+++|+.++..+...+.+... +..+++.+++...|...
T Consensus 85 g~id~lv~~Ag~~~--~~~~~--~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 147 (267)
T 2gdz_A 85 GRLDILVNNAGVNN--EKNWE--KTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------------- 147 (267)
T ss_dssp SCCCEEEECCCCCC--SSSHH--HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-------------
T ss_pred CCCCEEEECCCCCC--hhhHH--HHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-------------
Confidence 466888876532 22233 3789999876665555443311 13456666554333110
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+ +... |+.+|...+ .. .+ +++++++|+.+.++.... .... .. .. ....
T Consensus 148 ---~--~~~~---Y~~sK~a~~~~~~~~ala~e~~~~g-i~v~~v~Pg~v~t~~~~~---~~~~-~~---~~----~~~~ 207 (267)
T 2gdz_A 148 ---A--QQPV---YCASKHGIVGFTRSAALAANLMNSG-VRLNAICPGFVNTAILES---IEKE-EN---MG----QYIE 207 (267)
T ss_dssp ---T--TCHH---HHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEESCBSSHHHHG---GGCH-HH---HG----GGGG
T ss_pred ---C--CCch---HHHHHHHHHHHHHHHHHHHHhccCC-cEEEEEecCcCcchhhhc---cccc-cc---cc----hhhh
Confidence 0 0122 676664332 11 23 999999999997732110 0000 00 00 0000
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhh
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEI 288 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~ 288 (303)
........ .....+.+++|+|.++++++..+... |++|++.+++..++.|+
T Consensus 208 ~~~~~~~~-~~~~~~~~~~dvA~~v~~l~s~~~~~---G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 208 YKDHIKDM-IKYYGILDPPLIANGLITLIEDDALN---GAIMKITTSKGIHFQDY 258 (267)
T ss_dssp GHHHHHHH-HHHHCCBCHHHHHHHHHHHHHCTTCS---SCEEEEETTTEEEECCC
T ss_pred HHHHHHHH-hccccCCCHHHHHHHHHHHhcCcCCC---CcEEEecCCCcccccCc
Confidence 00000000 11223678999999999998776543 58999999988888775
No 179
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=99.74 E-value=4.1e-17 Score=137.66 Aligned_cols=217 Identities=11% Similarity=0.080 Sum_probs=139.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+.+|++|||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLA-VAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 457899999999999999999999 68999999999865432 113468889999999999888887
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++..+++++.... ....+++.+++...+.+.
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~------------- 169 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR------------- 169 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-------------
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC-------------
Confidence 45678888775432 23445556689999999999988876641 122345555442222100
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+..+ |+.+|...+ +. .+ +++..++|+.+.++.... ....-.....+.. ..|
T Consensus 170 -----~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~--~~p---- 231 (271)
T 4ibo_A 170 -----ATVAP---YTVAKGGIKMLTRAMAAEWAQYG-IQANAIGPGYMLTDMNQA---LIDNPEFDAWVKA--RTP---- 231 (271)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSGGGHH---HHHCHHHHHHHHH--HST----
T ss_pred -----CCchh---HHHHHHHHHHHHHHHHHHHhhhC-eEEEEEEeccEeCcchhh---cccCHHHHHHHHh--cCC----
Confidence 01223 777766544 22 23 999999999998742110 0000000011111 112
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
...+.+++|+|.++++++...... ..|+.+++.+|...+
T Consensus 232 ---------~~r~~~pedva~~v~~L~s~~~~~-itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 232 ---------AKRWGKPQELVGTAVFLSASASDY-VNGQIIYVDGGMLSV 270 (271)
T ss_dssp ---------TCSCBCGGGGHHHHHHHHSGGGTT-CCSCEEEESTTGGGB
T ss_pred ---------CCCCcCHHHHHHHHHHHhCccccC-CCCcEEEECCCeecc
Confidence 112557788899998887654322 446899999886543
No 180
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=99.74 E-value=1.1e-16 Score=134.10 Aligned_cols=214 Identities=15% Similarity=0.060 Sum_probs=136.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHh------ccCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLT------LLEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~------~~~~V~~ 98 (303)
+++|++|||||+|+||++++++|+ +.|++|++++|+..+.. ....++.++++|++|.++++++++ .+|.++|
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~ 85 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLL-DAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN 85 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHH-HHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 356899999999999999999999 68999999999765432 234578899999999999888876 5566888
Q ss_pred Eeecccc--------cCChHHHHHHHHHHHHHHHHHHHHHhhccC----------CccEEEEeecccccccccCCCcccc
Q 042242 99 IFWVTWA--------SQFASDMHKCCEQNKAMMCNALNAILPRAK----------ALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 99 ~~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~----------~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
.++.... ..+..+..+.+++|+.++..+++++..... .-.+++.+++...+...
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 157 (257)
T 3tl3_A 86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ-------- 157 (257)
T ss_dssp CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH--------
T ss_pred CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC--------
Confidence 8764321 134445556899999999999998876521 22345555543222110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCC
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNL 230 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
.+...|+.+|...+ +. .+ +++..++|+.|..+..... .... ...+.. ..
T Consensus 158 -------------~~~~~Y~asKaa~~~~~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~---~~~~--~~~~~~--~~ 216 (257)
T 3tl3_A 158 -------------IGQAAYSASKGGVVGMTLPIARDLASHR-IRVMTIAPGLFDTPLLASL---PEEA--RASLGK--QV 216 (257)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCTTC------CHHH--HHHHHH--TS
T ss_pred -------------CCCccHHHHHHHHHHHHHHHHHHhcccC-cEEEEEEecCccChhhhhc---cHHH--HHHHHh--cC
Confidence 01122777766443 22 23 9999999999987432211 0110 011111 11
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
|. + ..+.+++|+|.++++++.++... |+.+++.+|..++
T Consensus 217 ~~--~----------~r~~~p~dva~~v~~l~s~~~it---G~~i~vdGG~~~~ 255 (257)
T 3tl3_A 217 PH--P----------SRLGNPDEYGALAVHIIENPMLN---GEVIRLDGAIRMA 255 (257)
T ss_dssp SS--S----------CSCBCHHHHHHHHHHHHHCTTCC---SCEEEESTTC---
T ss_pred CC--C----------CCccCHHHHHHHHHHHhcCCCCC---CCEEEECCCccCC
Confidence 11 1 12568899999999998775443 5999999987654
No 181
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=99.74 E-value=1.5e-16 Score=133.45 Aligned_cols=224 Identities=13% Similarity=0.077 Sum_probs=136.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc-ccc-----c---CCCeEEEEecCCCHHHHHHHHh------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI-TAI-----Q---SSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~-----~---~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
++|+|+||||+|+||++++++|+ +.|++|++++|++.. ... . ..++.++.+|++|.++++++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALA-AQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999 689999999998765 220 0 3467889999999999888776
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 149 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS------------ 149 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC------------
Confidence 46778888765322 2234455568999999999999888654 1123455555543332110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+..+ |+.+|...+ ..... +++++++|+.+.++...... ......... ..+-...
T Consensus 150 ------~~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~----~~~~~~~ 213 (260)
T 1x1t_A 150 ------ANKSA---YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI---SALAEKNGV----DQETAAR 213 (260)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------
T ss_pred ------CCCch---HHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhh---hhhccccCC----chHHHHH
Confidence 00223 777766544 11122 99999999999885321110 000000000 0000000
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.-.... .....+.+++|+|.++++++...... ..|+.|++.++.
T Consensus 214 ~~~~~~-~p~~~~~~p~dva~~~~~l~s~~~~~-~tG~~~~vdgG~ 257 (260)
T 1x1t_A 214 ELLSEK-QPSLQFVTPEQLGGTAVFLASDAAAQ-ITGTTVSVDGGW 257 (260)
T ss_dssp -CHHHH-CTTCCCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTG
T ss_pred HHhhcc-CCCCCCcCHHHHHHHHHHHhChhhcC-CCCCEEEECCCc
Confidence 000000 12234678899999999988654321 346899998874
No 182
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.74 E-value=6.6e-16 Score=128.36 Aligned_cols=211 Identities=13% Similarity=0.078 Sum_probs=137.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhc-------cCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTL-------LEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~ 97 (303)
++|+++||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|++|.++++++++. +|.++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 82 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFA-KEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999 68999999999865432 1112478899999999998887765 56788
Q ss_pred EEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 98 HIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
|.++.... .....+..+.+++|+.++.++++++... ..+..+++.+++...++.+
T Consensus 83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------------- 143 (245)
T 1uls_A 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------------- 143 (245)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC-------------------
Confidence 88765322 2234445568999999999999888765 1234556666553322100
Q ss_pred CCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 172 SKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
.... |..+|...+ .. .+ +++++++|+.+..+..... . ... ...... ..|
T Consensus 144 ~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~-~--~~~--~~~~~~--~~p---------- 202 (245)
T 1uls_A 144 GQAN---YAASMAGVVGLTRTLALELGRWG-IRVNTLAPGFIETRMTAKV-P--EKV--REKAIA--ATP---------- 202 (245)
T ss_dssp TCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCTTTSSS-C--HHH--HHHHHH--TCT----------
T ss_pred Cchh---HHHHHHHHHHHHHHHHHHHhHhC-eEEEEEEeCcCcCcchhhc-C--HHH--HHHHHh--hCC----------
Confidence 0122 666655433 22 24 9999999999987432211 0 110 111111 111
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|.++++++..+... ..|+.+++.++..
T Consensus 203 ---~~~~~~~~dvA~~v~~l~s~~~~~-~tG~~~~vdgG~~ 239 (245)
T 1uls_A 203 ---LGRAGKPLEVAYAALFLLSDESSF-ITGQVLFVDGGRT 239 (245)
T ss_dssp ---TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTT
T ss_pred ---CCCCcCHHHHHHHHHHHhCchhcC-CcCCEEEECCCcc
Confidence 112568899999999988654322 3468899988754
No 183
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=99.74 E-value=7.7e-17 Score=135.67 Aligned_cols=216 Identities=13% Similarity=0.062 Sum_probs=139.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---cCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I---QSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+.+|+||||||+|+||++++++|+ +.|++|++++|+..... . ...++.++++|++|.++++++++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFA-AAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 356899999999999999999999 68999999999865432 0 23578899999999998877776
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccCC
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++..+++++.... ..-.+++.+++...+...
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 165 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL----------- 165 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-----------
Confidence 56778888765432 22344555689999999999999887651 112355555543332110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.+... |+.+|...+ +. .+ +++..++|+.|..+...... ........+.. ..|
T Consensus 166 -------~~~~~---Y~asK~a~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~--~~p-- 227 (266)
T 4egf_A 166 -------PDHYA---YCTSKAGLVMATKVLARELGPHG-IRANSVCPTVVLTEMGQRVW---GDEAKSAPMIA--RIP-- 227 (266)
T ss_dssp -------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESCBCSHHHHHHT---CSHHHHHHHHT--TCT--
T ss_pred -------CCChH---HHHHHHHHHHHHHHHHHHHhhhC-eEEEEEEeCCCcCchhhhhc---cChHHHHHHHh--cCC--
Confidence 00223 777766444 22 23 99999999999874211000 00000000111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|..+
T Consensus 228 -----------~~r~~~p~dva~~v~~L~s~~~~~-itG~~i~vdGG~~~ 265 (266)
T 4egf_A 228 -----------LGRFAVPHEVSDAVVWLASDAASM-INGVDIPVDGGYTM 265 (266)
T ss_dssp -----------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGG
T ss_pred -----------CCCCcCHHHHHHHHHHHhCchhcC-ccCcEEEECCCccC
Confidence 122567899999999988654322 45689999988543
No 184
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=99.73 E-value=1.3e-17 Score=134.89 Aligned_cols=181 Identities=14% Similarity=0.030 Sum_probs=122.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc---cCCCeEEEEecCCCHHHHHHHHh---ccCceeEEeec
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI---QSSSYCFISCDLLNPLDIKRKLT---LLEDVTHIFWV 102 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~l~~~~~---~~~~V~~~~~~ 102 (303)
|+|+||||+|+||++++++|+ +. +|++++|++.+... .... +++.+|++|.+++.++++ ++|.|+|+++.
T Consensus 1 k~vlVtGasg~iG~~la~~l~-~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALK-GH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTT-TS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHH-hC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 589999999999999999998 44 99999998654321 0112 788899999999999998 67889999765
Q ss_pred cccc----CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 103 TWAS----QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 103 ~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
.... .+..+..+.+++|+.++.++++++++. +..+++++|+...|... .+..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~sS~~~~~~~------------------~~~~~--- 133 (207)
T 2yut_A 77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ--KGARAVFFGAYPRYVQV------------------PGFAA--- 133 (207)
T ss_dssp CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE--EEEEEEEECCCHHHHSS------------------TTBHH---
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc--CCcEEEEEcChhhccCC------------------CCcch---
Confidence 4321 133344458999999999999999543 23456665554343111 01223
Q ss_pred HHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 179 YVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 179 y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
|+.+|...+ +. ... ++++++||+.++++.. . . .+ ..+..++
T Consensus 134 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~--~-----~----------~~-------------~~~~~~~ 183 (207)
T 2yut_A 134 YAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLW--A-----P----------LG-------------GPPKGAL 183 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG--G-----G----------GT-------------SCCTTCB
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCc--c-----c----------cC-------------CCCCCCC
Confidence 777666544 11 112 9999999999998420 0 0 01 1123477
Q ss_pred cHHHHHHHHHHHhcCcC
Q 042242 250 DSRLVAEQHIWVATNDD 266 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~ 266 (303)
+++|+|++++.++..+.
T Consensus 184 ~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 184 SPEEAARKVLEGLFREP 200 (207)
T ss_dssp CHHHHHHHHHHHHC--C
T ss_pred CHHHHHHHHHHHHhCCC
Confidence 89999999999987764
No 185
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=99.73 E-value=9.3e-17 Score=133.60 Aligned_cols=211 Identities=14% Similarity=0.120 Sum_probs=134.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec-CCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIAR-KPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
++|+|+||||+|+||++++++|+ +.|++|++++| ++.+.. ....++.++.+|++|.++++++++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLA-KQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 68999999999 443221 013468889999999999888876
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+.+.
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 148 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN------------- 148 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-------------
Confidence 46778888765322 2234455568999999988887776543 1123455555543232110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+ +... |+.+|...+ .. .+ +++++++|+.+.++..... . ... ...+.. ..|
T Consensus 149 ---~--~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~-~--~~~--~~~~~~--~~p---- 208 (246)
T 2uvd_A 149 ---P--GQAN---YVAAKAGVIGLTKTSAKELASRN-ITVNAIAPGFIATDMTDVL-D--ENI--KAEMLK--LIP---- 208 (246)
T ss_dssp ---T--TBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBGGGCSSCC-C--TTH--HHHHHH--TCT----
T ss_pred ---C--CCch---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEEeccccCcchhhc-C--HHH--HHHHHh--cCC----
Confidence 0 0122 777665443 11 23 9999999999987532211 0 010 000111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|.++++++..+... ..|+.+++.++.
T Consensus 209 ---------~~~~~~~~dvA~~~~~l~s~~~~~-~tG~~~~vdgG~ 244 (246)
T 2uvd_A 209 ---------AAQFGEAQDIANAVTFFASDQSKY-ITGQTLNVDGGM 244 (246)
T ss_dssp ---------TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTS
T ss_pred ---------CCCCcCHHHHHHHHHHHcCchhcC-CCCCEEEECcCc
Confidence 112668899999999988654321 345889988874
No 186
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=99.73 E-value=4.5e-16 Score=129.53 Aligned_cols=211 Identities=14% Similarity=0.089 Sum_probs=134.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc-------cCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL-------LEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~ 97 (303)
.+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. .+..+.+|++|.++++++++. +|.++
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 86 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLA-ADGHKVAVTHRGSGAPK----GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 86 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSSCCCT----TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChHHHH----HhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3457899999999999999999999 68999999999875432 223478999999988887764 46788
Q ss_pred EEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 98 HIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
|.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+. +
T Consensus 87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~-- 148 (247)
T 1uzm_A 87 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----------------G-- 148 (247)
T ss_dssp EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC----------------C--
Confidence 88765321 2344555568999999999999988754 1223455555543222100 0
Q ss_pred CCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 172 SKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
+... |+.+|...+ .. .+ +++++++|+.+.++.... .... ....... ..|
T Consensus 149 ~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~---~~~~--~~~~~~~--~~p---------- 207 (247)
T 1uzm_A 149 NQAN---YAASKAGVIGMARSIARELSKAN-VTANVVAPGYIDTDMTRA---LDER--IQQGALQ--FIP---------- 207 (247)
T ss_dssp CCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHH---SCHH--HHHHHGG--GCT----------
T ss_pred CChh---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEEeCCCcccchhh---cCHH--HHHHHHh--cCC----------
Confidence 0122 777766443 11 24 999999999997631100 0000 0000110 011
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
...+.+++|+|.++++++..+... ..|+.+++.++..+
T Consensus 208 ---~~~~~~~~dvA~~~~~l~s~~~~~-~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 208 ---AKRVGTPAEVAGVVSFLASEDASY-ISGAVIPVDGGMGM 245 (247)
T ss_dssp ---TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTTC
T ss_pred ---CCCCcCHHHHHHHHHHHcCccccC-CcCCEEEECCCccc
Confidence 112568899999999988654321 34689999888543
No 187
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.73 E-value=1.5e-16 Score=132.37 Aligned_cols=201 Identities=12% Similarity=0.025 Sum_probs=128.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCccccc----cCCCeEEEEecCCCHHHHHHHHh---------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITAI----QSSSYCFISCDLLNPLDIKRKLT--------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~--------- 91 (303)
++|+|+||||+|+||++++++|+ +.| ++|++++|++.+... ...++.++.+|++|.+++.++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~-~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLV-KDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHH-TCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEecCCchHHHHHHHHHH-hcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999 678 999999998665321 13478899999999998888877
Q ss_pred ccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--C------C-----ccEEEEeeccccccccc
Q 042242 92 LLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRA--K------A-----LKHVSLQTGMKHYVSLQ 153 (303)
Q Consensus 92 ~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~------~-----~~~~~~~s~~~~y~~~~ 153 (303)
.+|.|+|+++... ......+..+.+++|+.++.++++++.... . . ..+++.+++...+...
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~- 159 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD- 159 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT-
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC-
Confidence 6777999876543 223345555689999999999998877541 1 1 3466666654333111
Q ss_pred CCCcccccCCcCcCCCCCCCCccchHHHHHHHHHH-----h-----cCCcceEEecCCceeecCCCCccchhhHHHHHHH
Q 042242 154 GLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKEK-----L-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA 223 (303)
Q Consensus 154 ~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e~-----~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 223 (303)
+ .+..+ ..+...|+.+|...+. . .+ +++++++|+.+.++... .
T Consensus 160 ---------~-~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~-------~------ 212 (250)
T 1yo6_A 160 ---------N-TSGSA---QFPVLAYRMSKAAINMFGRTLAVDLKDDN-VLVVNFCPGWVQTNLGG-------K------ 212 (250)
T ss_dssp ---------C-CSTTS---SSCBHHHHHHHHHHHHHHHHHHHHTGGGT-CEEEEEECCCC--------------------
T ss_pred ---------c-ccccc---cCCccHHHHHHHHHHHHHHHHHHHhccCC-eEEEEEcCCceecCCCC-------C------
Confidence 0 00111 1122237877765541 1 13 99999999988763110 0
Q ss_pred HhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeec
Q 042242 224 VCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAIN 279 (303)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~ 279 (303)
. ...+++++|+++++++..+... ..|..+.+.+
T Consensus 213 ------~----------------~~~~~~~~a~~~~~~~~~~~~~-~~G~~~~~~g 245 (250)
T 1yo6_A 213 ------N----------------AALTVEQSTAELISSFNKLDNS-HNGRFFMRNL 245 (250)
T ss_dssp ----------------------------HHHHHHHHHHHTTCCGG-GTTCEEETTE
T ss_pred ------C----------------CCCCHHHHHHHHHHHHhccccc-CCCeEEEECC
Confidence 0 1346788999999988766432 2345555443
No 188
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=99.73 E-value=2.2e-16 Score=133.65 Aligned_cols=215 Identities=15% Similarity=0.099 Sum_probs=137.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.... . ...++.++.+|++|.++++++++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLG-KEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 346899999999999999999999 68999999999865422 1 13467889999999999888776
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--c--CCccEEEEeecccccccccCCCcccccCC
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--A--KALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.++|.++.... .....+..+.+++|+.++.++++++... . .+..+++.+++...+.+.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------- 167 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV----------- 167 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC-----------
Confidence 46678888765322 2234445568999999999999987654 1 123455555543222100
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHH--------HH-HHHHh
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCL--------CV-YGAVC 225 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~--------~~-~~~~~ 225 (303)
.+..+ |+.+|...+ ..... +++++++|+.+.++... ...... .. ...+.
T Consensus 168 -------~~~~~---Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
T 2rhc_B 168 -------VHAAP---YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA---SVREHYSDIWEVSTEEAFDRIT 234 (277)
T ss_dssp -------TTCHH---HHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH---HHHHHHHHHHTCCHHHHHHHHH
T ss_pred -------CCCcc---HHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh---hhhhhcccccccchHHHHHHHH
Confidence 00223 777666443 11223 99999999999874211 000000 00 00000
Q ss_pred hhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 226 KHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 226 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
. . ..+..+.+++|+|+++++++..+... ..|+.|++.++.
T Consensus 235 ~--~-------------~p~~r~~~~~dvA~~v~~l~s~~~~~-~tG~~~~vdGG~ 274 (277)
T 2rhc_B 235 A--R-------------VPIGRYVQPSEVAEMVAYLIGPGAAA-VTAQALNVCGGL 274 (277)
T ss_dssp H--H-------------STTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTC
T ss_pred h--c-------------CCCCCCcCHHHHHHHHHHHhCchhcC-CCCcEEEECCCc
Confidence 0 0 11223678999999999988654321 346899998874
No 189
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=99.73 E-value=2.3e-16 Score=132.66 Aligned_cols=202 Identities=12% Similarity=0.081 Sum_probs=130.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHh-------ccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLT-------LLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V 96 (303)
.+++|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++ .+|.+
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 91 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFS-EEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI 91 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 3467899999999999999999999 68999999999876543 233578899999999999888776 45668
Q ss_pred eEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 97 THIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 97 ~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
+|.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 92 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------------ 153 (266)
T 3p19_A 92 VNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF------------------ 153 (266)
T ss_dssp EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC------------------
Confidence 888765322 2234455568999999999988877643 1122355555543232110
Q ss_pred CCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhh
Q 042242 171 VSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREI 240 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (303)
.+... |+.+|...+ +. .+ +++.+++|+.|.++....... .... ..... .
T Consensus 154 ~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~~~--~~~~--~~~~~---~---------- 212 (266)
T 3p19_A 154 PDHAA---YCGTKFAVHAISENVREEVAASN-VRVMTIAPSAVKTELLSHTTS--QQIK--DGYDA---W---------- 212 (266)
T ss_dssp TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBSSSGGGGCSC--HHHH--HHHHH---H----------
T ss_pred CCCch---HHHHHHHHHHHHHHHHHHhcccC-cEEEEEeeCccccchhhcccc--hhhh--HHHHh---h----------
Confidence 00122 777666544 22 23 999999999998743221110 0000 00000 0
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCC
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~ 267 (303)
. ..+..+.+++|+|+++++++..+..
T Consensus 213 ~-~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 213 R-VDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp H-HHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred c-ccccCCCCHHHHHHHHHHHHcCCCC
Confidence 0 1222367889999999999988754
No 190
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=99.73 E-value=1.5e-16 Score=132.15 Aligned_cols=204 Identities=12% Similarity=0.031 Sum_probs=134.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-------eEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-------KVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~- 91 (303)
++|+|+||||+|+||++++++|+ +.|+ +|++++|++.... . ...++.++.+|++|.+++.++++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~-~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFA-RAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHH-HHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence 35789999999999999999999 5788 9999999865422 1 13457889999999999888876
Q ss_pred ------ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCccc
Q 042242 92 ------LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEK 159 (303)
Q Consensus 92 ------~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~ 159 (303)
.+|.|+|+++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+|+...|...
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 152 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF------- 152 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC-------
Confidence 46778898765322 2234455568999999999999988653 1123456665553333110
Q ss_pred ccCCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCC
Q 042242 160 QVRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNL 230 (303)
Q Consensus 160 ~~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
.+..+ |+.+|...+ ..... ++++++||+.++++..... . ..
T Consensus 153 -----------~~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~-----------~~ 202 (244)
T 2bd0_A 153 -----------RHSSI---YCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-----D-----------DE 202 (244)
T ss_dssp -----------TTCHH---HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-----C-----------ST
T ss_pred -----------CCCch---hHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-----c-----------cc
Confidence 01223 777766544 11223 9999999999998532110 0 00
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
. . ..+.+++|+|+++++++..+... ..|+++...+++.
T Consensus 203 ~-------~------~~~~~~~dva~~~~~l~~~~~~~-~~g~~~~~~~~~~ 240 (244)
T 2bd0_A 203 M-------Q------ALMMMPEDIAAPVVQAYLQPSRT-VVEEIILRPTSGD 240 (244)
T ss_dssp T-------G------GGSBCHHHHHHHHHHHHTSCTTE-EEEEEEEEETTCC
T ss_pred c-------c------ccCCCHHHHHHHHHHHHhCCccc-cchheEEeccccc
Confidence 0 0 12678899999999998765432 2234554445443
No 191
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=99.73 E-value=1.1e-16 Score=135.37 Aligned_cols=211 Identities=14% Similarity=0.088 Sum_probs=135.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec-CCcccc-----c--c-CCCeEEEEecCCCH----HHHHHHHh-
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIAR-KPEITA-----I--Q-SSSYCFISCDLLNP----LDIKRKLT- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~-----~--~-~~~~~~~~~D~~~~----~~l~~~~~- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++| ++.... . . ..++.++.+|++|. ++++++++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLH-QQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 346899999999999999999999 68999999999 544321 0 0 34688899999999 88887776
Q ss_pred ------ccCceeEEeeccccc----CCh-----------HHHHHHHHHHHHHHHHHHHHHhhcc-CCc------cEEEEe
Q 042242 92 ------LLEDVTHIFWVTWAS----QFA-----------SDMHKCCEQNKAMMCNALNAILPRA-KAL------KHVSLQ 143 (303)
Q Consensus 92 ------~~~~V~~~~~~~~~~----~~~-----------~~~~~~~~~n~~~~~~ll~~~~~~~-~~~------~~~~~~ 143 (303)
.+|.++|.|+..... ... .+..+.+++|+.++.++++++.... ... .+++.+
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i 167 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL 167 (276)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence 467788887653221 122 4445689999999999999988752 112 455555
Q ss_pred ecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccc
Q 042242 144 TGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYN 213 (303)
Q Consensus 144 s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~ 213 (303)
++...|... .+... |+.+|...+ +. .+ +++++++|+.++++ . ...
T Consensus 168 sS~~~~~~~------------------~~~~~---Y~asK~a~~~l~~~la~e~~~~g-i~v~~v~PG~v~t~-~--~~~ 222 (276)
T 1mxh_A 168 CDAMTDLPL------------------PGFCV---YTMAKHALGGLTRAAALELAPRH-IRVNAVAPGLSLLP-P--AMP 222 (276)
T ss_dssp CCGGGGSCC------------------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSBSCC-S--SSC
T ss_pred CchhhcCCC------------------CCCee---hHHHHHHHHHHHHHHHHHHhhcC-eEEEEEecCcccCC-c--cCC
Confidence 553333110 00122 777766554 11 24 99999999999986 2 111
Q ss_pred hhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 214 FLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
... ...+.. ..|. + + .+.+++|+|.++++++...... ..|+.|++.++.
T Consensus 223 --~~~--~~~~~~--~~p~---~------r---~~~~~~dva~~v~~l~s~~~~~-~tG~~~~vdgG~ 271 (276)
T 1mxh_A 223 --QET--QEEYRR--KVPL---G------Q---SEASAAQIADAIAFLVSKDAGY-ITGTTLKVDGGL 271 (276)
T ss_dssp --HHH--HHHHHT--TCTT---T------S---CCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTG
T ss_pred --HHH--HHHHHh--cCCC---C------C---CCCCHHHHHHHHHHHhCccccC-ccCcEEEECCch
Confidence 111 011111 1111 1 1 1567899999999988654321 345899998874
No 192
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=99.73 E-value=1.9e-16 Score=134.28 Aligned_cols=216 Identities=13% Similarity=0.085 Sum_probs=132.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
.++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++++|++|.++++++++
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALA-ASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999 68999999997543311 113468899999999998888776
Q ss_pred -ccCceeEEeeccc------ccCChHHHHHHHHHHHHHHHHHHHHHhhccC-----CccEEEEeecccccccccCCCccc
Q 042242 92 -LLEDVTHIFWVTW------ASQFASDMHKCCEQNKAMMCNALNAILPRAK-----ALKHVSLQTGMKHYVSLQGLPEEK 159 (303)
Q Consensus 92 -~~~~V~~~~~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-----~~~~~~~~s~~~~y~~~~~~~g~~ 159 (303)
.+|.++|.|+... ...+..+..+.+++|+.++.++++++..... ...+++.+++...+.+.
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------- 178 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS------- 178 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-------
Confidence 5677888876521 1224455556889999999999988776511 12345555543222110
Q ss_pred ccCCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCC
Q 042242 160 QVRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNL 230 (303)
Q Consensus 160 ~~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
.+..+ |+.+|...+ ..... +++..++|+.|.++...... ... ..
T Consensus 179 -----------~~~~~---Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~---~~------- 231 (280)
T 4da9_A 179 -----------PERLD---YCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS---GKY---DG------- 231 (280)
T ss_dssp ------------CCHH---HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------
T ss_pred -----------CCccH---HHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc---hhH---HH-------
Confidence 00223 777766544 11122 99999999999874321110 000 00
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
. ...+ . .....+.+++|+|.++++++...... ..|+.+++.+|..+
T Consensus 232 ~-~~~~----~-~p~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG~~~ 277 (280)
T 4da9_A 232 L-IESG----L-VPMRRWGEPEDIGNIVAGLAGGQFGF-ATGSVIQADGGLSI 277 (280)
T ss_dssp ----------------CCBCHHHHHHHHHHHHTSTTGG-GTTCEEEESTTCC-
T ss_pred H-Hhhc----C-CCcCCcCCHHHHHHHHHHHhCccccC-CCCCEEEECCCccc
Confidence 0 0000 0 12223668899999999988665432 34689999988653
No 193
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=99.73 E-value=2.1e-16 Score=134.65 Aligned_cols=218 Identities=11% Similarity=0.057 Sum_probs=137.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+||||||+|+||++++++|+ +.|++|++++|++.... . ...++.++.+|++|.++++++++.
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYA-KAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999 68999999999865422 0 124688899999999998888765
Q ss_pred -cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.|+.... .....+..+.+++|+.++..+++++... ..+..+++.+++...+.+.
T Consensus 111 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~------------- 177 (291)
T 3cxt_A 111 IIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR------------- 177 (291)
T ss_dssp CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-------------
T ss_pred CCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECccccccCC-------------
Confidence 6778888765322 2234455568999999999998887653 1123455555543222000
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHH--HHH-HhhhCCCce
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCV--YGA-VCKHLNLPF 232 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~--~~~-~~~~~~~~~ 232 (303)
.+..+ |+.+|...+ +. .+ +++++++|+.+.++.............. +.. +.. .
T Consensus 178 -----~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~--- 243 (291)
T 3cxt_A 178 -----ETVSA---YAAAKGGLKMLTKNIASEYGEAN-IQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIA--K--- 243 (291)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCTTC------------CHHHHHHHH--H---
T ss_pred -----CCChH---HHHHHHHHHHHHHHHHHHHhhcC-eEEEEEEECCCcCcchhhhccchhhhhhhhHHhhhhc--c---
Confidence 01223 777766444 11 23 9999999999988532211000000000 000 000 0
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..+..+.+++|+|.++++++..+... ..|+.+++.++..
T Consensus 244 ----------~p~~r~~~pedvA~~v~~l~s~~~~~-itG~~i~vdGG~~ 282 (291)
T 3cxt_A 244 ----------TPAARWGEAEDLMGPAVFLASDASNF-VNGHILYVDGGIL 282 (291)
T ss_dssp ----------CTTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred ----------CCCCCCCCHHHHHHHHHHHhCccccC-CcCCeEEECCCcc
Confidence 11123668899999999888654321 3458898888743
No 194
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=99.73 E-value=4.2e-16 Score=132.97 Aligned_cols=217 Identities=10% Similarity=0.009 Sum_probs=139.4
Q ss_pred CCCCEEEEEcCCCh--hHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGL--VGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~--iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|+|+||||+|+ ||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAR-EAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHH-HTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 45789999999988 9999999999 68999999999853211 112468889999999999888776
Q ss_pred -ccCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccC
Q 042242 92 -LLEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 -~~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|.|+... ...+..+..+.+++|+.++..+++++.....+-.+++.+++...+...
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---------- 177 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM---------- 177 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC----------
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC----------
Confidence 4566888876542 233445556689999999999999988753333355555543232110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
..... |+.+|...+ +. .+ +++..++|+.|.++........ .. ....... ..|
T Consensus 178 --------~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~~~-~~--~~~~~~~--~~p- 239 (293)
T 3grk_A 178 --------PNYNV---MGVAKAALEASVKYLAVDLGPQN-IRVNAISAGPIKTLAASGIGDF-RY--ILKWNEY--NAP- 239 (293)
T ss_dssp --------TTTTH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCCCC------CCH-HH--HHHHHHH--HST-
T ss_pred --------CchHH---HHHHHHHHHHHHHHHHHHHhHhC-CEEEEEecCCCcchhhhcccch-HH--HHHHHHh--cCC-
Confidence 00223 777766544 22 23 9999999999988432211110 01 0001111 111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|..++
T Consensus 240 ------------~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG~~~~ 278 (293)
T 3grk_A 240 ------------LRRTVTIDEVGDVGLYFLSDLSRS-VTGEVHHADSGYHVI 278 (293)
T ss_dssp ------------TSSCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGGB
T ss_pred ------------CCCCCCHHHHHHHHHHHcCccccC-CcceEEEECCCcccC
Confidence 122567899999999988654322 456899999886543
No 195
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=99.73 E-value=2.4e-16 Score=133.04 Aligned_cols=215 Identities=14% Similarity=0.073 Sum_probs=138.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh-----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
.+++|+|+||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.+++.++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLA-SMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 3457899999999999999999999 68999999999654321 113468899999999998888776
Q ss_pred --ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 92 --LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 --~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 173 (271)
T 4iin_A 105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN----------- 173 (271)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC-----------
Confidence 45668888765432 2234555568999999999988887654 1123455555543222110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+... |+.+|...+ ..... +++..++|+.+..+...... .. .. ....
T Consensus 174 -------~~~~~---Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~------~~-----~~~~ 229 (271)
T 4iin_A 174 -------MGQTN---YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK---DE------LK-----ADYV 229 (271)
T ss_dssp -------TTCHH---HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------------------CG
T ss_pred -------CCchH---hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc---HH------HH-----HHHH
Confidence 01223 777776554 11122 99999999999874211110 00 00 0000
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.. .....+.+++|+|+++++++..+... ..|+.+++.+|..
T Consensus 230 ~~------~~~~~~~~p~dvA~~i~~l~s~~~~~-itG~~i~vdGG~~ 270 (271)
T 4iin_A 230 KN------IPLNRLGSAKEVAEAVAFLLSDHSSY-ITGETLKVNGGLY 270 (271)
T ss_dssp GG------CTTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSC
T ss_pred hc------CCcCCCcCHHHHHHHHHHHhCCCcCC-CcCCEEEeCCCee
Confidence 00 22234678899999999988655322 3468999988753
No 196
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=99.73 E-value=3.3e-16 Score=128.32 Aligned_cols=202 Identities=15% Similarity=0.105 Sum_probs=132.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc---cCceeEEeecc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHIFWVT 103 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~~~~~ 103 (303)
++|+++||||+|+||++++++|+ +.|++|++++|+.. +|++|.++++++++. +|.++|.++..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLE-SEHTIVHVASRQTG-------------LDISDEKSVYHYFETIGAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHC-STTEEEEEESGGGT-------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEecCCcc-------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 46899999999999999999999 78999999999853 899999999888874 45688887643
Q ss_pred c-----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 104 W-----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 104 ~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
. ...+..+..+.+++|+.++..+++++.....+-.+++.+++...+... .+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------------~~~~~--- 129 (223)
T 3uce_A 71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV------------------ANTYV--- 129 (223)
T ss_dssp CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC------------------TTCHH---
T ss_pred CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC------------------CCchH---
Confidence 1 123445556689999999999999998763222345555443222110 01223
Q ss_pred HHHHHHHHH-----H---hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCcc
Q 042242 179 YVLEDLLKE-----K---LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSD 250 (303)
Q Consensus 179 y~~~k~~~e-----~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (303)
|+.+|...+ + ... +++..++|+.+.++........ ........... ..| ...+.+
T Consensus 130 Y~asK~a~~~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~--~~~-------------~~~~~~ 192 (223)
T 3uce_A 130 KAAINAAIEATTKVLAKELAP-IRVNAISPGLTKTEAYKGMNAD-DRDAMYQRTQS--HLP-------------VGKVGE 192 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-SEEEEEEECSBCSGGGTTSCHH-HHHHHHHHHHH--HST-------------TCSCBC
T ss_pred HHHHHHHHHHHHHHHHHhhcC-cEEEEEEeCCCcchhhhhcchh-hHHHHHHHHhh--cCC-------------CCCccC
Confidence 777766554 1 123 8999999999987532211100 00000111111 111 123568
Q ss_pred HHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 251 SRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 251 ~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
++|+|+++++++...... |+.+++.+|..+
T Consensus 193 ~~dvA~~~~~l~~~~~~t---G~~i~vdgG~~~ 222 (223)
T 3uce_A 193 ASDIAMAYLFAIQNSYMT---GTVIDVDGGALL 222 (223)
T ss_dssp HHHHHHHHHHHHHCTTCC---SCEEEESTTGGG
T ss_pred HHHHHHHHHHHccCCCCC---CcEEEecCCeec
Confidence 899999999988765433 589999988654
No 197
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=99.73 E-value=5.1e-16 Score=131.27 Aligned_cols=214 Identities=12% Similarity=0.031 Sum_probs=138.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++++|++|.++++++++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYA-EAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999 68999999999876532 112468899999999999888887
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++..+++++.... ..-.+++.+++...+...
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~------------ 176 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN------------ 176 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC------------
Confidence 56778888765432 22344555688999999999999887651 111344554443222110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+ ..+...|+.+|...+ +. .+ +++..++|+.|..+..... ... ...... ..|
T Consensus 177 ----~---~~~~~~Y~asKaa~~~l~~~la~e~~~~g-Irvn~v~PG~v~T~~~~~~----~~~--~~~~~~--~~p--- 237 (276)
T 3r1i_A 177 ----I---PQQVSHYCTSKAAVVHLTKAMAVELAPHQ-IRVNSVSPGYIRTELVEPL----ADY--HALWEP--KIP--- 237 (276)
T ss_dssp ----C---SSCCHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCSTTTGGG----GGG--HHHHGG--GST---
T ss_pred ----C---CCCcchHHHHHHHHHHHHHHHHHHHhhcC-cEEEEEeeCCCcCCccccc----hHH--HHHHHh--cCC---
Confidence 0 001122777766554 11 23 9999999999987432211 110 000111 111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 238 ----------~~r~~~pedvA~~v~fL~s~~~~~-itG~~i~vdGG~~ 274 (276)
T 3r1i_A 238 ----------LGRMGRPEELTGLYLYLASAASSY-MTGSDIVIDGGYT 274 (276)
T ss_dssp ----------TSSCBCGGGSHHHHHHHHSGGGTT-CCSCEEEESTTTT
T ss_pred ----------CCCCcCHHHHHHHHHHHcCccccC-ccCcEEEECcCcc
Confidence 112557788999999888654322 4568999988754
No 198
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=99.73 E-value=9.3e-17 Score=134.40 Aligned_cols=214 Identities=15% Similarity=0.075 Sum_probs=135.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
|+|+|+||||+|+||++++++|+ +.|++|++++|++.+.. . ...++.++.+|++|.+++.++++ .
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLV-KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999 68999999999865422 0 12467889999999999888887 5
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-ccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KA-LKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~-~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.++.... ..+..+..+.+++|+.++..+++++.... .+ ..+++.+++...+.+.
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 146 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------- 146 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-------------
Confidence 6778888764321 22344555689999999998888877641 11 2455555543222100
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHH---------HHHHhh
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCV---------YGAVCK 226 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~---------~~~~~~ 226 (303)
+ +... |+.+|...+ +. .+ +++++++|+.+.++... .....+.. ...+..
T Consensus 147 ---~--~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 214 (256)
T 1geg_A 147 ---P--ELAV---YSSSKFAVRGLTQTAARDLAPLG-ITVNGYCPGIVKTPMWA---EIDRQVSEAAGKPLGYGTAEFAK 214 (256)
T ss_dssp ---T--TBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBSSHHHH---HHHHHHHHHHTCCTTHHHHHHHT
T ss_pred ---C--Cchh---HHHHHHHHHHHHHHHHHHHHHcC-eEEEEEEECCCccchhh---hhhhhccccccCChHHHHHHHHh
Confidence 0 0122 777666443 11 23 99999999999873210 00000000 000000
Q ss_pred hCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 227 HLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.. ....+.+++|+|.++++++..+... ..|+.+++.++..
T Consensus 215 --~~-------------p~~r~~~p~dvA~~v~~l~s~~~~~-~tG~~i~vdGG~~ 254 (256)
T 1geg_A 215 --RI-------------TLGRLSEPEDVAACVSYLASPDSDY-MTGQSLLIDGGMV 254 (256)
T ss_dssp --TC-------------TTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESSSSS
T ss_pred --cC-------------CCCCCcCHHHHHHHHHHHhCccccC-CCCCEEEeCCCcc
Confidence 01 1123678899999999988654321 3468999988754
No 199
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=99.73 E-value=8.9e-16 Score=129.46 Aligned_cols=213 Identities=13% Similarity=0.036 Sum_probs=139.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh-----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
.+++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3457899999999999999999999 68999999987753321 113468889999999999888776
Q ss_pred --ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 --LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 --~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++..+++++.....+-.+++.+++......
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~-------------- 172 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV-------------- 172 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC--------------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC--------------
Confidence 56778888765322 2244555668999999999999998876333345555544211100
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+..+... |+.+|...+ +. .+ +++..++|+.|.++........... ... ..|
T Consensus 173 ---~~~~~~~---Y~asKaa~~~l~~~la~e~~~~g-Irvn~v~PG~v~T~~~~~~~~~~~~------~~~--~~~---- 233 (271)
T 3v2g_A 173 ---PWPGISL---YSASKAALAGLTKGLARDLGPRG-ITVNIVHPGSTDTDMNPADGDHAEA------QRE--RIA---- 233 (271)
T ss_dssp ---CSTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCSSSSCSSCSSHHH------HHH--TCT----
T ss_pred ---CCCCchH---HHHHHHHHHHHHHHHHHHhhhhC-eEEEEEecCCCcCCcccccchhHHH------HHh--cCC----
Confidence 0001223 777776544 22 23 9999999999998533221111011 111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|.++++++...... ..|+.+++.+|.
T Consensus 234 ---------~~r~~~pedvA~~v~fL~s~~~~~-itG~~i~vdGG~ 269 (271)
T 3v2g_A 234 ---------TGSYGEPQDIAGLVAWLAGPQGKF-VTGASLTIDGGA 269 (271)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTT
T ss_pred ---------CCCCCCHHHHHHHHHHHhCcccCC-ccCCEEEeCcCc
Confidence 112557899999999887544322 446899998874
No 200
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=99.73 E-value=4.4e-16 Score=134.61 Aligned_cols=158 Identities=15% Similarity=0.124 Sum_probs=107.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------------ccCCCeEEEEecCCCHHHHHHHHh---
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------------IQSSSYCFISCDLLNPLDIKRKLT--- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------------~~~~~~~~~~~D~~~~~~l~~~~~--- 91 (303)
++|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~-~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALA-GAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 45799999999999999999999 68999999998742110 113468899999999999988887
Q ss_pred ----ccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCccccc
Q 042242 92 ----LLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 92 ----~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
.+|.++|.|+... ...+..+..+.+++|+.++.++++++... ..+..+++.+++...+....
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~-------- 154 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP-------- 154 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC--------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC--------
Confidence 5677888877532 22244555568999999999999998543 11233455554432221110
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeec
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~ 206 (303)
+. ..+ |+.+|...+ .. .+ +++++++||.|.++
T Consensus 155 -------~~--~~~---Y~asKaa~~~~~~~la~el~~~g-I~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 155 -------PY--LAP---YFAAKAAMDAIAVQYARELSRWG-IETSIIVPGAFTSG 196 (324)
T ss_dssp -------SS--CHH---HHHHHHHHHHHHHHHHHHHHTTT-EEEEEEEECCC---
T ss_pred -------Cc--chh---HHHHHHHHHHHHHHHHHHhhhhC-cEEEEEECCccccC
Confidence 00 123 777776554 11 23 99999999999864
No 201
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=99.73 E-value=6.7e-17 Score=135.98 Aligned_cols=216 Identities=13% Similarity=0.029 Sum_probs=136.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-------ccCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-------LLEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~~ 98 (303)
+++|+||||||+|+||++++++|+ +.|++|++++|+..... ....+.+|+.|.+++.++++ .+|.++|
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~----~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALR-AAGARVAVADRAVAGIA----ADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEECSSCCTTSC----CSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHH----hhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 356899999999999999999999 68999999999876532 22445799999988777665 4567888
Q ss_pred Eeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 99 IFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 99 ~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+..
T Consensus 101 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--------------------- 159 (266)
T 3uxy_A 101 NAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP--------------------- 159 (266)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC---------------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC---------------------
Confidence 8765432 2244555568999999999999998543 112334555544322211
Q ss_pred CCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccch--hhHHHHHHHHhhhCCCceeeCCchhh
Q 042242 173 KSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNF--LGCLCVYGAVCKHLNLPFVFGGTREI 240 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (303)
..+...|+.+|...+ +. .+ +++.+++|+.+.++........ .........+.. .
T Consensus 160 ~~~~~~Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~----------- 225 (266)
T 3uxy_A 160 GPGHALYCLTKAALASLTQCMGMDHAPQG-IRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGR--T----------- 225 (266)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHT--T-----------
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhhhcC-cEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHh--c-----------
Confidence 011122777776554 11 24 9999999999987421100000 000000000100 1
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
..+..+.+++|+|.++++++...... ..|+.+++.+|..++
T Consensus 226 --~p~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 226 --VPLGRIAEPEDIADVVLFLASDAARY-LCGSLVEVNGGKAVA 266 (266)
T ss_dssp --STTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTCCCC
T ss_pred --CCCCCCcCHHHHHHHHHHHhCchhcC-CcCCEEEECcCEeCC
Confidence 12223668899999999988765332 346899999987653
No 202
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.73 E-value=7.3e-17 Score=136.85 Aligned_cols=223 Identities=11% Similarity=0.049 Sum_probs=139.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc--CC---CeEEEEecCCCHHHHHHHHh----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ--SS---SYCFISCDLLNPLDIKRKLT---- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~--~~---~~~~~~~D~~~~~~l~~~~~---- 91 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.+.. .. .. ++.++.+|++|.++++++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFA-QEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 456899999999999999999999 68999999999865432 11 12 68889999999998888776
Q ss_pred ---ccCceeEEeecccc--------cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcc
Q 042242 92 ---LLEDVTHIFWVTWA--------SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 92 ---~~~~V~~~~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~ 158 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++.++++++.... .+ .+++.+++...+...
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------ 155 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA------ 155 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC------
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC------
Confidence 45778888765422 22344555689999999999999987641 11 455555543232110
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHH-HHHHHhhhC
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLC-VYGAVCKHL 228 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~-~~~~~~~~~ 228 (303)
.+ +... |+.+|...+ +. ... +++++++|+.+.++...... ...... .........
T Consensus 156 ---------~~--~~~~---Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~ 220 (280)
T 1xkq_A 156 ---------QP--DFLY---YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG-MPDQASQKFYNFMASH 220 (280)
T ss_dssp ---------CC--SSHH---HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT-CCHHHHHHHHHHHHHC
T ss_pred ---------CC--cccH---HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccc-cccccccchHHHHHHH
Confidence 00 0122 777766544 11 122 99999999999884211100 000000 000011100
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCc-CCcCCCCceEEeecCCCc
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATND-DISSTKGQAFNAINGPRF 283 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~-~~~~~~g~~yni~~~~~~ 283 (303)
... .....+.+++|+|.++++++..+ ... ..|+.+++.++..+
T Consensus 221 ~~~-----------~p~~~~~~pedvA~~v~~l~s~~~~~~-~tG~~i~vdgG~~~ 264 (280)
T 1xkq_A 221 KEC-----------IPIGAAGKPEHIANIILFLADRNLSFY-ILGQSIVADGGTSL 264 (280)
T ss_dssp TTT-----------CTTSSCBCHHHHHHHHHHHHCHHHHTT-CCSCEEEESTTGGG
T ss_pred HcC-----------CCCCCCCCHHHHHHHHHHhcCcccccC-ccCCeEEECCCccc
Confidence 000 01123678899999999988654 211 34589999888643
No 203
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=99.73 E-value=5e-17 Score=135.86 Aligned_cols=212 Identities=14% Similarity=0.152 Sum_probs=133.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCcccc---c--c--CCCeEEEEecCCCH-HHHHHHHh-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITA---I--Q--SSSYCFISCDLLNP-LDIKRKLT----- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~---~--~--~~~~~~~~~D~~~~-~~l~~~~~----- 91 (303)
+++|+|+||||+|+||++++++|+ +.|++ |++++|++.... . . ..++.++.+|++|. ++++++++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~-~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELV-KRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHH-HCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 346899999999999999999999 68997 999999864211 0 1 23678899999998 88777766
Q ss_pred --ccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC-C----ccEEEEeecccccccccCCCcccccCCc
Q 042242 92 --LLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK-A----LKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 --~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~----~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.++.. .. .+..+.+++|+.++.++++++..... + -.+++.+|+...|...
T Consensus 82 ~g~id~lv~~Ag~~--~~--~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 145 (254)
T 1sby_A 82 LKTVDILINGAGIL--DD--HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------------ 145 (254)
T ss_dssp HSCCCEEEECCCCC--CT--TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------
T ss_pred cCCCCEEEECCccC--CH--HHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC------------
Confidence 567788887653 22 22334899999999999999876521 1 2355555553333110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+..+ |+.+|...+ .. .+ +++++++|+.+.++........... .+
T Consensus 146 ------~~~~~---Y~~sK~a~~~~~~~la~~~~~~g-i~v~~v~Pg~v~t~~~~~~~~~~~~------------~~--- 200 (254)
T 1sby_A 146 ------HQVPV---YSASKAAVVSFTNSLAKLAPITG-VTAYSINPGITRTPLVHTFNSWLDV------------EP--- 200 (254)
T ss_dssp ------TTSHH---HHHHHHHHHHHHHHHHHHHHHHS-EEEEEEEECSEESHHHHSCCCGGGS------------CT---
T ss_pred ------CCchH---HHHHHHHHHHHHHHHHHHhccCC-eEEEEEecCCccCccccccchhhhh------------hH---
Confidence 00122 777666554 11 34 9999999999988421110000000 00
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC--CccHH
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP--RFTWK 286 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~--~~s~~ 286 (303)
..... .....+.+++|+|++++.++... ..|+.|++.++. +++|.
T Consensus 201 --~~~~~-~~~~~~~~~~dvA~~i~~~~~~~----~~G~~~~v~gG~~~~~~~~ 247 (254)
T 1sby_A 201 --RVAEL-LLSHPTQTSEQCGQNFVKAIEAN----KNGAIWKLDLGTLEAIEWT 247 (254)
T ss_dssp --THHHH-HTTSCCEEHHHHHHHHHHHHHHC----CTTCEEEEETTEEEECCCC
T ss_pred --HHHHH-HhcCCCCCHHHHHHHHHHHHHcC----CCCCEEEEeCCceeEeccc
Confidence 00000 11112347899999999887632 335899998873 45554
No 204
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=99.73 E-value=4.5e-17 Score=137.05 Aligned_cols=212 Identities=13% Similarity=0.085 Sum_probs=134.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~ 95 (303)
++|+||||||+|+||++++++|+ +.|++|++++|+..+.. ....++.++.+|++|.++++++++ .+|.
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFH-AQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999 68999999999865432 123578899999999999888776 4667
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
++|.|+.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+.+.
T Consensus 105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------------- 167 (266)
T 3grp_A 105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN----------------- 167 (266)
T ss_dssp EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------------
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC-----------------
Confidence 8888765332 2234455568999999988777776543 1122345554443222110
Q ss_pred CCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 170 RVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
.+...|+.+|...+ +. .+ +++.+++|+.+.++..... ... ....+.. ..|
T Consensus 168 ----~~~~~Y~asKaa~~~~~~~la~e~~~~g-I~vn~v~PG~v~t~~~~~~---~~~--~~~~~~~--~~p-------- 227 (266)
T 3grp_A 168 ----PGQTNYCAAKAGLIGFSKALAQEIASRN-ITVNCIAPGFIKSAMTDKL---NEK--QKEAIMA--MIP-------- 227 (266)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSHHHHTC---CHH--HHHHHHT--TCT--------
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHhhhhC-cEEEEEeeCcCCCchhhcc---CHH--HHHHHHh--cCC--------
Confidence 01122777776433 22 23 9999999999987421111 001 0011111 112
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 228 -----~~r~~~~edvA~~v~~L~s~~~~~-itG~~i~vdGG~~ 264 (266)
T 3grp_A 228 -----MKRMGIGEEIAFATVYLASDEAAY-LTGQTLHINGGMA 264 (266)
T ss_dssp -----TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTC-
T ss_pred -----CCCCcCHHHHHHHHHHHhCccccC-ccCCEEEECCCee
Confidence 123567899999999988654332 3468999988753
No 205
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=99.73 E-value=4.8e-16 Score=130.86 Aligned_cols=213 Identities=12% Similarity=0.066 Sum_probs=135.9
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh----
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT---- 91 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~---- 91 (303)
+..|+|+|+||||+|+||++++++|+ +.|++|++++++..... ....++.++.+|++|.++++++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~-~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLA-ADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34577899999999999999999999 68999987765543211 123578899999999999888876
Q ss_pred ---ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc---cCCccEEEEeecccccccccCCCccccc
Q 042242 92 ---LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR---AKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 92 ---~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++.++++++... .....+++.+++...+.+.
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 171 (267)
T 4iiu_A 101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN--------- 171 (267)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC---------
T ss_pred HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC---------
Confidence 45668888765432 2244555668999999999999887421 1223355555543232111
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.+... |+.+|...+ +. .+ +++.+++|+.+.++..... ... ...... ..|
T Consensus 172 ---------~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~----~~~--~~~~~~--~~p 230 (267)
T 4iiu_A 172 ---------RGQVN---YSAAKAGIIGATKALAIELAKRK-ITVNCIAPGLIDTGMIEME----ESA--LKEAMS--MIP 230 (267)
T ss_dssp ---------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSTTCCCC----HHH--HHHHHH--TCT
T ss_pred ---------CCCch---hHHHHHHHHHHHHHHHHHHhhcC-eEEEEEEEeeecCCccccc----HHH--HHHHHh--cCC
Confidence 00223 777776333 22 23 9999999999988532211 110 011111 112
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|.
T Consensus 231 -------------~~~~~~~edva~~~~~L~s~~~~~-itG~~i~vdGG~ 266 (267)
T 4iiu_A 231 -------------MKRMGQAEEVAGLASYLMSDIAGY-VTRQVISINGGM 266 (267)
T ss_dssp -------------TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTC
T ss_pred -------------CCCCcCHHHHHHHHHHHhCCcccC-ccCCEEEeCCCc
Confidence 112567899999999988654322 346899998763
No 206
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=99.73 E-value=5.2e-16 Score=131.55 Aligned_cols=215 Identities=10% Similarity=0.039 Sum_probs=138.8
Q ss_pred CCCEEEEEcCCCh--hHHHHHHHHhhcCCCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhcc------
Q 042242 27 AKNVAVIFGVTGL--VGKELARRLISTANWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTLL------ 93 (303)
Q Consensus 27 ~~~~vlVtGatG~--iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~------ 93 (303)
++|+|+||||+|+ ||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++.+
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMH-REGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHH-HTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHH-HcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 4689999999977 9999999999 68999999999872111 12346889999999999988887654
Q ss_pred -CceeEEeeccccc---------CChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccC
Q 042242 94 -EDVTHIFWVTWAS---------QFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 94 -~~V~~~~~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
|.++|.|+..... .......+.+++|+.++.++++++... ..+-.+++.+++...+...
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 173 (280)
T 3nrc_A 104 LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM---------- 173 (280)
T ss_dssp CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC----------
T ss_pred CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC----------
Confidence 5688887654321 344455568999999999999998765 2223455555543222110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+... |+.+|...+ +. .+ +++.+++|+.|..+........ .. ....... ..|
T Consensus 174 --------~~~~~---Y~asKaal~~~~~~la~e~~~~g-i~v~~v~PG~v~T~~~~~~~~~-~~--~~~~~~~--~~p- 235 (280)
T 3nrc_A 174 --------PSYNT---MGVAKASLEATVRYTALALGEDG-IKVNAVSAGPIKTLAASGISNF-KK--MLDYNAM--VSP- 235 (280)
T ss_dssp --------TTTHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCCCCSGGGGCTTH-HH--HHHHHHH--HST-
T ss_pred --------CCchh---hHHHHHHHHHHHHHHHHHHHHcC-cEEEEEeeccccchhhhcCcch-HH--HHHHHHh--cCC-
Confidence 00122 777766544 11 23 9999999999988432211100 01 0011111 111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
...+.+++|+|+++++++...... ..|+.+++.+|..+
T Consensus 236 ------------~~~~~~pedvA~~v~~l~s~~~~~-~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 236 ------------LKKNVDIMEVGNTVAFLCSDMATG-ITGEVVHVDAGYHC 273 (280)
T ss_dssp ------------TCSCCCHHHHHHHHHHTTSGGGTT-CCSCEEEESTTGGG
T ss_pred ------------CCCCCCHHHHHHHHHHHhCcccCC-cCCcEEEECCCccc
Confidence 122567899999999987654322 44689999988643
No 207
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=99.73 E-value=1.7e-16 Score=132.58 Aligned_cols=212 Identities=15% Similarity=0.141 Sum_probs=132.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc-------cCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL-------LEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~ 97 (303)
.+++|+|+||||+|+||++++++|+ +.|++|++++|++.+. ..+.++.+|++|.++++++++. +|.++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~----~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv 92 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFA-DAGDKVAITYRSGEPP----EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLI 92 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSSCCC----TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChHhh----ccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3457899999999999999999999 6899999999986542 3478899999999998888765 46688
Q ss_pred EEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 98 HIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
|.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 93 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------------- 153 (253)
T 2nm0_A 93 ANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS------------------- 153 (253)
T ss_dssp EECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-------------------
Confidence 88765322 1122333458999999999999887654 1123455555543222100
Q ss_pred CCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 172 SKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
.....|+.+|...+ ..... +++++++|+.+..+..... . ... ...+.. ..|
T Consensus 154 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~--~~~--~~~~~~--~~p----------- 213 (253)
T 2nm0_A 154 --AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL-T--DEQ--RANIVS--QVP----------- 213 (253)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------C--HHHHHT--TCT-----------
T ss_pred --CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc-C--HHH--HHHHHh--cCC-----------
Confidence 00112777666443 11222 9999999998876321110 0 000 000100 111
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
+..+.+++|+|.++++++..+... ..|+.+++.++..+
T Consensus 214 --~~~~~~p~dvA~~i~~l~s~~~~~-~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 214 --LGRYARPEEIAATVRFLASDDASY-ITGAVIPVDGGLGM 251 (253)
T ss_dssp --TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTTC
T ss_pred --CCCCcCHHHHHHHHHHHhCccccC-CcCcEEEECCcccc
Confidence 112668899999999988664322 34688999887543
No 208
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=99.73 E-value=4.1e-16 Score=129.91 Aligned_cols=215 Identities=14% Similarity=0.090 Sum_probs=132.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC-cccc----ccCCCeEEEEecCCCHHHHHHHHh-------cc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP-EITA----IQSSSYCFISCDLLNPLDIKRKLT-------LL 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~ 93 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++ .... ....++.++++|++|.++++++++ .+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFA-VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 456899999999999999999999 6899999999987 4321 113468889999999998887764 46
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
|.++|.++.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...|...
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 148 (249)
T 2ew8_A 84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI--------------- 148 (249)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC---------------
Confidence 678888765322 2244455568999999988888886543 1123455555553333110
Q ss_pred CCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 168 CPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
.+... |+.+|...+ +. .+ +++++++|+.+.++..... ..... ..... . +..+
T Consensus 149 ---~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~--~~~~~---~~~~~--~--~~~~-- 210 (249)
T 2ew8_A 149 ---EAYTH---YISTKAANIGFTRALASDLGKDG-ITVNAIAPSLVRTATTEAS--ALSAM---FDVLP--N--MLQA-- 210 (249)
T ss_dssp ---SSCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCC-------------------------C--TTSS--
T ss_pred ---CCchh---HHHHHHHHHHHHHHHHHHHHhcC-cEEEEEecCcCcCccchhc--cccch---hhHHH--H--hhCc--
Confidence 00222 777666544 11 24 9999999999988432100 00000 00000 0 0001
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|.++++++..+... ..|+.+++.++..
T Consensus 211 -------~~~~~~p~dva~~~~~l~s~~~~~-~tG~~~~vdGG~~ 247 (249)
T 2ew8_A 211 -------IPRLQVPLDLTGAAAFLASDDASF-ITGQTLAVDGGMV 247 (249)
T ss_dssp -------SCSCCCTHHHHHHHHHHTSGGGTT-CCSCEEEESSSCC
T ss_pred -------cCCCCCHHHHHHHHHHHcCcccCC-CCCcEEEECCCcc
Confidence 112568899999999988654221 3468899988743
No 209
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=99.73 E-value=2.3e-16 Score=130.20 Aligned_cols=186 Identities=14% Similarity=0.038 Sum_probs=119.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHh-------ccCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLT-------LLEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V 96 (303)
|+|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|++|.+++.++++ .+|.+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLH-AKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56899999999999999999999 68999999999865432 112378899999999998888776 45668
Q ss_pred eEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 97 THIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 97 ~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
+|+++.... .....+..+.+++|+.++..+++.+.+. ..+..+++++|+...|.. .
T Consensus 83 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------------~ 144 (234)
T 2ehd_A 83 VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP------------------F 144 (234)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC------------------C
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC------------------C
Confidence 888765322 2234455568999999998777666543 123456666655333211 0
Q ss_pred CCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhh
Q 042242 171 VSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREI 240 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (303)
.+..+ |+.+|...+ .. .+ ++++++||+.+..+... . .+ . .
T Consensus 145 ~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~-------~------------~~----~--~- 194 (234)
T 2ehd_A 145 KGGAA---YNASKFGLLGLAGAAMLDLREAN-VRVVNVLPGSVDTGFAG-------N------------TP----G--Q- 194 (234)
T ss_dssp TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEECC---------------------------------------
T ss_pred CCCch---hhHHHHHHHHHHHHHHHHHhhcC-cEEEEEEeCCCcCCccc-------c------------cc----c--c-
Confidence 01223 777776433 11 23 99999999988763110 0 00 0 0
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcC
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
+ . ..+++|+|+++++++..+.
T Consensus 195 ~-~----~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 195 A-W----KLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp --------CCHHHHHHHHHHHHHSCC
T ss_pred c-C----CCCHHHHHHHHHHHhCCCc
Confidence 0 1 3578999999999887654
No 210
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=99.72 E-value=3.5e-16 Score=132.04 Aligned_cols=211 Identities=14% Similarity=0.090 Sum_probs=131.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec-CCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIAR-KPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+|+||||||+|+||++++++|+ +.|++|+++.+ +..... ....++.++.+|++|.++++++++.
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 104 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAA-RQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR 104 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5799999999999999999999 68999988744 433221 1134688999999999988887764
Q ss_pred cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhccC-----CccEEEEeecccccccccCCCcccccC
Q 042242 93 LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRAK-----ALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 ~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-----~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.|+.... ..+..+..+.+++|+.++..+++++..... +..+++.+++...+.+..
T Consensus 105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 175 (272)
T 4e3z_A 105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--------- 175 (272)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT---------
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC---------
Confidence 4668888765332 124455566899999999999988776521 234556655533331110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
....+ |+.+|...+ +. .+ +++.+++|+.|.++..... ..... . ..
T Consensus 176 --------~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~--~~~~~------~-----~~ 230 (272)
T 4e3z_A 176 --------TQYVD---YAASKAAIDTFTIGLAREVAAEG-IRVNAVRPGIIETDLHASG--GLPDR------A-----RE 230 (272)
T ss_dssp --------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBC----------------------------
T ss_pred --------CCcch---hHHHHHHHHHHHHHHHHHHHHcC-cEEEEEecCCCcCCccccc--CChHH------H-----HH
Confidence 00122 777766554 11 24 9999999999998532210 00000 0 00
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
.... ..+..+.+++|+|+++++++...... ..|+.|++.+|
T Consensus 231 ~~~~------~~~~~~~~~edvA~~i~~l~s~~~~~-~tG~~i~vdgG 271 (272)
T 4e3z_A 231 MAPS------VPMQRAGMPEEVADAILYLLSPSASY-VTGSILNVSGG 271 (272)
T ss_dssp ---C------CTTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred Hhhc------CCcCCCcCHHHHHHHHHHHhCCcccc-ccCCEEeecCC
Confidence 1111 12223567899999999988654332 34689999876
No 211
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.72 E-value=3.4e-16 Score=131.73 Aligned_cols=217 Identities=15% Similarity=0.057 Sum_probs=136.6
Q ss_pred CCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---cCCCeEEEEecCCCHHHHHHHHh---
Q 042242 23 REVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I---QSSSYCFISCDLLNPLDIKRKLT--- 91 (303)
Q Consensus 23 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~~~~~l~~~~~--- 91 (303)
...+++|+||||||+|+||++++++|+ +.|++|++++|++.+.. . ...++.++.+|++|.++++++++
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLA-EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 344567899999999999999999999 68999999999865421 0 13467888999999998888776
Q ss_pred ----ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeeccc-ccccccCCCcccc
Q 042242 92 ----LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMK-HYVSLQGLPEEKQ 160 (303)
Q Consensus 92 ----~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~-~y~~~~~~~g~~~ 160 (303)
.+|.++|.++.... .....+..+.+++|+.++.++++++... ..+..+++.+++.. .+.
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------- 164 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV---------- 164 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc----------
Confidence 45678888765322 2233445568899999999998887653 12234555555432 110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCC
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNL 230 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
+..+... |+.+|...+ +. .+ +++++++|+.+.++... .....-.....+.. ..
T Consensus 165 --------~~~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~~~~---~~~~~~~~~~~~~~--~~ 227 (267)
T 1vl8_A 165 --------TMPNISA---YAASKGGVASLTKALAKEWGRYG-IRVNVIAPGWYRTKMTE---AVFSDPEKLDYMLK--RI 227 (267)
T ss_dssp --------CSSSCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBCSTTTH---HHHTCHHHHHHHHH--TC
T ss_pred --------CCCCChh---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEEeccCcccccc---ccccChHHHHHHHh--hC
Confidence 0000222 777666554 11 24 99999999999874211 00000000011111 11
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
| +..+.+++|+|.++++++...... ..|+.+++.++.
T Consensus 228 p-------------~~~~~~p~dvA~~v~~l~s~~~~~-itG~~i~vdGG~ 264 (267)
T 1vl8_A 228 P-------------LGRTGVPEDLKGVAVFLASEEAKY-VTGQIIFVDGGW 264 (267)
T ss_dssp T-------------TSSCBCGGGGHHHHHHHHSGGGTT-CCSCEEEESTTG
T ss_pred C-------------CCCCcCHHHHHHHHHHHcCccccC-CcCCeEEECCCC
Confidence 1 112567788999999888654321 345889888874
No 212
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.72 E-value=2.4e-16 Score=131.07 Aligned_cols=218 Identities=12% Similarity=0.024 Sum_probs=137.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHh---ccCceeEEe
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLT---LLEDVTHIF 100 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~---~~~~V~~~~ 100 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|++|.++++++++ .+|.++|.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~A 82 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFA-REGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA 82 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECC
Confidence 356899999999999999999999 68999999999865432 112368889999999999887765 456688887
Q ss_pred ecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC
Q 042242 101 WVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS 174 (303)
Q Consensus 101 ~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~ 174 (303)
+.... .....+..+.+++|+.++.++++++... ..+..+++.+++...+... + .
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~----~ 142 (246)
T 2ag5_A 83 GFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------------V----V 142 (246)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------------C----T
T ss_pred ccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------------C----C
Confidence 65332 2234445568899999999999987653 1123455555543222110 0 0
Q ss_pred ccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccch-hhHHHHHHHHhhhCCCceeeCCchhhhhh
Q 042242 175 NNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNF-LGCLCVYGAVCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 175 ~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (303)
+...|+.+|...+ +. .+ ++++++||+.++++........ ...-.....+.. ..|
T Consensus 143 ~~~~Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~------------ 207 (246)
T 2ag5_A 143 NRCVYSTTKAAVIGLTKSVAADFIQQG-IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK--RQK------------ 207 (246)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH--TCT------------
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcC-cEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHh--cCC------------
Confidence 1122777766554 11 24 9999999999998421100000 000000001111 111
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|.++++++..+... ..|+.+++.++.
T Consensus 208 -~~~~~~~~dvA~~v~~l~s~~~~~-~tG~~i~vdgG~ 243 (246)
T 2ag5_A 208 -TGRFATAEEIAMLCVYLASDESAY-VTGNPVIIDGGW 243 (246)
T ss_dssp -TSSCEEHHHHHHHHHHHHSGGGTT-CCSCEEEECTTG
T ss_pred -CCCCCCHHHHHHHHHHHhCccccC-CCCCEEEECCCc
Confidence 112568899999999988654322 345889988874
No 213
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.72 E-value=2.3e-16 Score=132.56 Aligned_cols=220 Identities=17% Similarity=0.132 Sum_probs=139.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+.+|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++++|++|.++++++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCA-EQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCcEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999 68999999999865432 123478899999999999888776
Q ss_pred ccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.++... ...+..+..+.+++|+.++.++++++... ..+-.+++.+++...+...
T Consensus 88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 154 (264)
T 3ucx_A 88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQ------------- 154 (264)
T ss_dssp CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCC-------------
T ss_pred CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCC-------------
Confidence 3566888875421 12334555668999999999999987754 1111355555543232110
Q ss_pred cCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhh------HHHHHHHHhhhCCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLG------CLCVYGAVCKHLNL 230 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~ 230 (303)
.+..+ |+.+|...+ ..... +++.+++|+.|+++.......... .-.....+.. .
T Consensus 155 -----~~~~~---Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 223 (264)
T 3ucx_A 155 -----AKYGA---YKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA--G- 223 (264)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT--T-
T ss_pred -----CccHH---HHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc--c-
Confidence 00122 777765444 11122 999999999998742110000000 0000000000 1
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
..+..+.+++|+|.++++++...... ..|+.+++.+|..+
T Consensus 224 ------------~p~~r~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdGG~~~ 263 (264)
T 3ucx_A 224 ------------SDLKRLPTEDEVASAILFMASDLASG-ITGQALDVNCGEYK 263 (264)
T ss_dssp ------------SSSSSCCBHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSSC
T ss_pred ------------CCcccCCCHHHHHHHHHHHcCccccC-CCCCEEEECCCccC
Confidence 12223668899999999988654322 44689999988643
No 214
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=99.72 E-value=9.1e-17 Score=134.23 Aligned_cols=217 Identities=11% Similarity=0.046 Sum_probs=137.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----cCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----QSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+... ...++.++++|++|.++++++++. +|
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 82 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLL-GEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 457899999999999999999999 689999999998654321 134688899999999998887765 36
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.++.... ..+..+..+.+++|+.++..+.+++... ... .+++.+++...|...
T Consensus 83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---------------- 145 (253)
T 1hxh_A 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI---------------- 145 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC----------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC----------------
Confidence 68888765322 2234455568999999888777766543 122 566666654333110
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-c--CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-A--GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.+...|+.+|...+ .. . + ++++++||+.++++....... .... ..... ... ..
T Consensus 146 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g-i~v~~v~Pg~v~t~~~~~~~~--~~~~--~~~~~--~~~---~~ 210 (253)
T 1hxh_A 146 -----EQYAGYSASKAAVSALTRAAALSCRKQGYA-IRVNSIHPDGIYTPMMQASLP--KGVS--KEMVL--HDP---KL 210 (253)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEESEECCHHHHHHSC--TTCC--HHHHB--CBT---TT
T ss_pred -----CCCccHHHHHHHHHHHHHHHHHHhhhcCCC-eEEEEEEeCCccCchhhhccc--hhhh--HHHHh--hhh---cc
Confidence 01112777666544 11 2 5 999999999999842110000 0000 00000 000 00
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|.++++++..+... ..|+.+++.++..
T Consensus 211 ------~p~~~~~~~~dvA~~~~~l~s~~~~~-~tG~~~~vdgG~~ 249 (253)
T 1hxh_A 211 ------NRAGRAYMPERIAQLVLFLASDESSV-MSGSELHADNSIL 249 (253)
T ss_dssp ------BTTCCEECHHHHHHHHHHHHSGGGTT-CCSCEEEESSSCT
T ss_pred ------CccCCCCCHHHHHHHHHHHcCccccC-CCCcEEEECCCcc
Confidence 11123568899999999988654322 3458899888753
No 215
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.72 E-value=2.7e-16 Score=131.54 Aligned_cols=216 Identities=12% Similarity=0.143 Sum_probs=135.2
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC-cccc-------ccCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP-EITA-------IQSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
....+|+||||||+|+||++++++|+ +.|++|++++++. .... ....++.++.+|++|.++++++++.
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLH-KDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA 87 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHH-HTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence 34467899999999999999999999 6899999988543 3221 1234688999999999998888764
Q ss_pred ----cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccC
Q 042242 93 ----LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 ----~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 157 (256)
T 3ezl_A 88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ---------- 157 (256)
T ss_dssp HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC----------
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC----------
Confidence 4568888765332 2344555668999999988888887553 1122345555543222110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+... |+.+|...+ +. .+ +++.+++|+.+.++..... .... ...+.. ..|
T Consensus 158 --------~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~---~~~~--~~~~~~--~~~- 217 (256)
T 3ezl_A 158 --------FGQTN---YSTAKAGIHGFTMSLAQEVATKG-VTVNTVSPGYIGTDMVKAI---RPDV--LEKIVA--TIP- 217 (256)
T ss_dssp --------SCCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHTS---CHHH--HHHHHH--HST-
T ss_pred --------CCCcc---cHHHHHHHHHHHHHHHHHHHHhC-CEEEEEEECcccCcccccc---CHHH--HHHHHh--cCC-
Confidence 01223 787776443 11 23 9999999999987421111 0110 011111 111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
...+.+++|+|.++++++...... ..|+.|++.+|..+
T Consensus 218 ------------~~~~~~~~dva~~~~~l~s~~~~~-~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 218 ------------VRRLGSPDEIGSIVAWLASEESGF-STGADFSLNGGLHM 255 (256)
T ss_dssp ------------TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSCC
T ss_pred ------------CCCCcCHHHHHHHHHHHhCCcccC-CcCcEEEECCCEeC
Confidence 122567899999999888654322 44689999988654
No 216
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=5.2e-16 Score=130.07 Aligned_cols=219 Identities=15% Similarity=0.082 Sum_probs=135.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|++|||||+|+||++++++|+ +.|++|++++++..... ....++.++.+|++|.++++++++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 457899999999999999999999 68999999865543321 113468899999999999888876
Q ss_pred -ccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 -LLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 -~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.|+... ...+.....+.+++|+.++.++++++.....+-.+++.+++...+...
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 151 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG------------- 151 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC-------------
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC-------------
Confidence 4566888875431 122344455689999999999999998763222345555543222000
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
..+... |+.+|...+ +... +++..++|+.+..+...... .. .... .....
T Consensus 152 ----~~~~~~---Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~---~~-----~~~~-----~~~~~ 210 (259)
T 3edm_A 152 ----GPGALA---YATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFT---KP-----EVRE-----RVAGA 210 (259)
T ss_dssp ----STTCHH---HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------------------------------
T ss_pred ----CCCcHH---HHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccccc---Ch-----HHHH-----HHHhc
Confidence 000223 777766554 2233 89999999998874221110 00 0000 00000
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHH
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWK 286 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~ 286 (303)
..+..+.+++|+|.++++++...... ..|+.|++.++...+..
T Consensus 211 ------~p~~r~~~pedva~~v~~L~s~~~~~-itG~~i~vdGg~~~~~~ 253 (259)
T 3edm_A 211 ------TSLKREGSSEDVAGLVAFLASDDAAY-VTGACYDINGGVLFSEG 253 (259)
T ss_dssp ----------CCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESBCSSBC--
T ss_pred ------CCCCCCcCHHHHHHHHHHHcCccccC-ccCCEEEECCCcCCCCC
Confidence 12223568899999999988654332 45699999988765543
No 217
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=99.72 E-value=9.1e-17 Score=135.49 Aligned_cols=226 Identities=15% Similarity=0.100 Sum_probs=139.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHh-------ccCc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLT-------LLED 95 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~ 95 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.... .+..++.++.+|++|.++++++++ .+|.
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 85 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFV-NSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 85 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457899999999999999999999 68999999999865432 122358889999999999888776 4567
Q ss_pred eeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
++|.++.... ..+..+..+.+++|+.++.++++++.... .+..+++.+++...+.+. +
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------ 149 (270)
T 1yde_A 86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ----------A------ 149 (270)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC----------T------
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC----------C------
Confidence 8888764321 22334455689999999999999887531 112355555543221010 0
Q ss_pred CCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchh-hHHHHHHHHhhhCCCceeeCCch
Q 042242 170 RVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFL-GCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
...+ |+.+|...+ .. .+ +++.++||+.++++......... .....+..... ..|
T Consensus 150 --~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~p------- 214 (270)
T 1yde_A 150 --QAVP---YVATKGAVTAMTKALALDESPYG-VRVNCISPGNIWTPLWEELAALMPDPRASIREGML--AQP------- 214 (270)
T ss_dssp --TCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHH--TST-------
T ss_pred --CCcc---cHHHHHHHHHHHHHHHHHhhhhC-cEEEEEEeCccccchhhhhhhcccchHHHHHHHhh--cCC-------
Confidence 0123 777666554 11 23 99999999999984211000000 00000000000 111
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHH
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPS 291 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~ 291 (303)
+..+.+++|+|.++++++..... ..|+.+++.++..+.+.+....
T Consensus 215 ------~~r~~~p~dva~~v~~L~s~~~~--itG~~i~vdGG~~~~~~~~~~~ 259 (270)
T 1yde_A 215 ------LGRMGQPAEVGAAAVFLASEANF--CTGIELLVTGGAELGYGCKASR 259 (270)
T ss_dssp ------TSSCBCHHHHHHHHHHHHHHCTT--CCSCEEEESTTTTSCC------
T ss_pred ------CCCCcCHHHHHHHHHHHcccCCC--cCCCEEEECCCeecccCcCccc
Confidence 11256788999999888765222 3468999999987776655443
No 218
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.72 E-value=7.1e-17 Score=133.47 Aligned_cols=202 Identities=11% Similarity=0.015 Sum_probs=130.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh---------ccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT---------LLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~---------~~~~V~ 97 (303)
++|+|+||||+|+||++++++|+ +.|++|++++|++.... ....++.+|++|.+++.++++ .+|.++
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv 77 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFK-KNGYTVLNIDLSANDQA---DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 77 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHH-HTTEEEEEEESSCCTTS---SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEecCccccc---cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 45799999999999999999999 68999999999876532 245677899999998877775 456688
Q ss_pred EEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 98 HIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 98 ~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
|.++... ......+..+.+++|+.++.++++++.....+-.+++.+++...+..
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------------- 136 (236)
T 1ooe_A 78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP--------------------- 136 (236)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---------------------
T ss_pred ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC---------------------
Confidence 8876432 12223444568899999999999998875221234555554323210
Q ss_pred CCccchHHHHHHHHH-----Hh---c--CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 173 KSNNFYYVLEDLLKE-----KL---A--GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e-----~~---~--~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
..+...|+.+|...+ +. . .. +++++++|+.+.++. . .. ... ...
T Consensus 137 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---~----~~------~~~--~~~---------- 191 (236)
T 1ooe_A 137 TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---N----RK------WMP--NAD---------- 191 (236)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---H----HH------HST--TCC----------
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---h----hh------cCC--Ccc----------
Confidence 011122777776554 11 1 23 999999999887731 0 01 000 000
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+....+.+|+|.+++..+.++......|+.+++.++.
T Consensus 192 ---~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 192 ---HSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp ---GGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred ---ccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 0124567899999886664433322446888887764
No 219
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=99.72 E-value=1.2e-15 Score=129.06 Aligned_cols=216 Identities=11% Similarity=0.009 Sum_probs=136.4
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCccc---c---ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEIT---A---IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~---~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++|+|+||||+ |+||++++++|+ +.|++|++++|++... . ....++.++.+|++|.++++++++.
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCF-NQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHH-TTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 346899999999 999999999999 6899999999987411 1 1123478899999999998887764
Q ss_pred --cCceeEEeecccc--------cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccC
Q 042242 93 --LEDVTHIFWVTWA--------SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 --~~~V~~~~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.++.... ..+..+....+++|+.++.++++++.....+-.+++.+++...+..
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------- 151 (275)
T 2pd4_A 83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY----------- 151 (275)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----------
Confidence 4668888765322 3344555668999999999999999876211134444444222100
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
..+..+ |+.+|...+ ..... +++++++|+.+.++..... ..... ....+.. ..|
T Consensus 152 -------~~~~~~---Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~--~~~~~~~--~~p-- 214 (275)
T 2pd4_A 152 -------MAHYNV---MGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-ADFRM--ILKWNEI--NAP-- 214 (275)
T ss_dssp -------CTTCHH---HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TTHHH--HHHHHHH--HST--
T ss_pred -------CCCchh---hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-cccHH--HHHHHHh--cCC--
Confidence 000122 777766554 11122 9999999999988432111 00001 0011111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|.++++++...... ..|+.|++.++..
T Consensus 215 -----------~~~~~~p~dva~~~~~l~s~~~~~-~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 215 -----------LRKNVSLEEVGNAGMYLLSSLSSG-VSGEVHFVDAGYH 251 (275)
T ss_dssp -----------TSSCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred -----------cCCCCCHHHHHHHHHHHhCccccC-CCCCEEEECCCcc
Confidence 112457899999999988653321 3458888887753
No 220
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=99.71 E-value=3.5e-16 Score=129.55 Aligned_cols=213 Identities=15% Similarity=0.099 Sum_probs=133.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-------ccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-------LLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~~~ 99 (303)
|+|+++||||+|+||++++++|+ +.|++|++++|++.+.... .++.++.+|++| +++.++++ .+|.++|.
T Consensus 1 ~~k~vlVTGas~giG~~~a~~l~-~~G~~V~~~~r~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~ 77 (239)
T 2ekp_A 1 MERKALVTGGSRGIGRAIAEALV-ARGYRVAIASRNPEEAAQS-LGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA 77 (239)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHH-HTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHh-hCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence 46899999999999999999999 6899999999987652211 137788999998 76665544 46668888
Q ss_pred eecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 100 FWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 100 ~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...|... + ..+.
T Consensus 78 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------~~~~ 141 (239)
T 2ekp_A 78 AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG----------G------PVPI 141 (239)
T ss_dssp CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------T------TSCC
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC----------C------CCCC
Confidence 764322 2244555668999999999999888653 1123456666554333111 0 0012
Q ss_pred CccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhh
Q 042242 174 SNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 174 ~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (303)
.. |+.+|...+ .. .+ ++++++||+.+.++... .....-.....+.. ..|
T Consensus 142 ~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~--~~p------------ 200 (239)
T 2ekp_A 142 PA---YTTAKTALLGLTRALAKEWARLG-IRVNLLCPGYVETEFTL---PLRQNPELYEPITA--RIP------------ 200 (239)
T ss_dssp HH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCSGGGH---HHHTCHHHHHHHHT--TCT------------
T ss_pred cc---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEEeCCccCchhh---ccccCHHHHHHHHh--cCC------------
Confidence 23 777766544 11 24 99999999999874211 00000000011111 111
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|.++++++..+... ..|+.+++.++.
T Consensus 201 -~~~~~~~~dvA~~~~~l~s~~~~~-~tG~~~~vdgG~ 236 (239)
T 2ekp_A 201 -MGRWARPEEIARVAAVLCGDEAEY-LTGQAVAVDGGF 236 (239)
T ss_dssp -TSSCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTT
T ss_pred -CCCCcCHHHHHHHHHHHcCchhcC-CCCCEEEECCCc
Confidence 112568899999999987654321 346889888874
No 221
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=99.71 E-value=4e-16 Score=132.20 Aligned_cols=214 Identities=11% Similarity=0.036 Sum_probs=133.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-------cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-------QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+...... ...++.++.+|++|.++++++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYA-QAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHH-HHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 356899999999999999999999 579999999998754320 134688899999999998888875
Q ss_pred -cCceeEEeecccc------cCChHHHHHHHHHHHHHHH----HHHHHHhhccCCccEEEEeecccccccccCCCccccc
Q 042242 93 -LEDVTHIFWVTWA------SQFASDMHKCCEQNKAMMC----NALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 -~~~V~~~~~~~~~------~~~~~~~~~~~~~n~~~~~----~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
+|.|+|.++.... .....+..+.+++|+.++. .++..+++. +..+++++|+...+...
T Consensus 111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~~~~iv~isS~~~~~~~--------- 179 (279)
T 3ctm_A 111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN--GKGSLIITSSISGKIVN--------- 179 (279)
T ss_dssp CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCCEEEEECCCTTSCC----------
T ss_pred CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCeEEEECchHhccCC---------
Confidence 6778898765332 2233445568899999954 555555443 23455555543222100
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH-----HhcC--C-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE-----KLAG--K-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~~~--~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+ ..+...|+.+|...+ +... . -++++++|+.+.++..... . ... ...+.. ..|
T Consensus 180 -------~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~~-~--~~~--~~~~~~--~~p-- 240 (279)
T 3ctm_A 180 -------I---PQLQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDFA-S--KDM--KAKWWQ--LTP-- 240 (279)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSSC-C--HHH--HHHHHH--HST--
T ss_pred -------C---CCCcccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCcccccccc-C--hHH--HHHHHH--hCC--
Confidence 0 011122777776655 1111 0 2789999999987432111 0 110 001111 011
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|.++++++..+... ..|+.+++.++..
T Consensus 241 -----------~~~~~~~~dvA~~~~~l~s~~~~~-~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 241 -----------LGREGLTQELVGGYLYLASNASTF-TTGSDVVIDGGYT 277 (279)
T ss_dssp -----------TCSCBCGGGTHHHHHHHHSGGGTT-CCSCEEEESTTCC
T ss_pred -----------ccCCcCHHHHHHHHHHHhCccccC-ccCCEEEECCCee
Confidence 112567788899999888654321 3458999988754
No 222
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=99.71 E-value=4e-16 Score=129.79 Aligned_cols=215 Identities=14% Similarity=0.044 Sum_probs=139.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------cc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LL 93 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~ 93 (303)
.+.+|+++||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++ .+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLA-ADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI 81 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 3467899999999999999999999 68999999999875432 123578889999999999888876 45
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc---cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR---AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
|.++|.|+.... ..+..+..+.+++|+.++.++++++... .....+++.+++...+.+.
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 147 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-------------- 147 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC--------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC--------------
Confidence 678888765322 2244555668999999999999986543 1123455555553333111
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.+..+ |+.+|...+ +. .+ +++..++|+.|..+....... .....+... ..+
T Consensus 148 ----~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~----~~~----- 208 (247)
T 3rwb_A 148 ----PNMAA---YVAAKGGVIGFTRALATELGKYN-ITANAVTPGLIESDGVKASPH--NEAFGFVEM----LQA----- 208 (247)
T ss_dssp ----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHTSGG--GGGHHHHHH----HSS-----
T ss_pred ----CCchh---hHHHHHHHHHHHHHHHHHhhhcC-eEEEEEeeCcCcCccccccCh--hHHHHHHhc----ccc-----
Confidence 00223 777765443 22 23 999999999998742111000 000000000 011
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 209 --------~~r~~~pedva~~v~~L~s~~~~~-itG~~i~vdGG~~ 245 (247)
T 3rwb_A 209 --------MKGKGQPEHIADVVSFLASDDARW-ITGQTLNVDAGMV 245 (247)
T ss_dssp --------SCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTSS
T ss_pred --------cCCCcCHHHHHHHHHHHhCccccC-CCCCEEEECCCcc
Confidence 112457889999999888655332 4568999988753
No 223
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=99.71 E-value=1e-15 Score=129.43 Aligned_cols=213 Identities=17% Similarity=0.160 Sum_probs=135.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-cCCCeEEEEecCCCHHHHHHHHh-------cc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-QSSSYCFISCDLLNPLDIKRKLT-------LL 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~~~D~~~~~~l~~~~~-------~~ 93 (303)
++|+|+||||+|+||++++++|+ +.|++|++++|++.... . ...++.++.+|++|.++++++++ .+
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLL-EAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999 68999999999865422 1 11267888999999998888776 45
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc----cC--CccEEEEeecccccccccCCCcccccCC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR----AK--ALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~--~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
|.++|.|+.... .....+..+.+++|+.++.++++++... .. ...+++.+++...|...
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~----------- 175 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM----------- 175 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC-----------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC-----------
Confidence 678888765332 2233444568999999998888877643 11 11456666554333110
Q ss_pred cCcCCCCCCCC-ccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 164 YDEECPRVSKS-NNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 164 ~~e~~~~~p~~-~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
+. .. + |+.+|...+ +. .+ +++++++|+.+.++.... .... ....+......|
T Consensus 176 -----~~--~~~~---Y~asK~a~~~~~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~---~~~~--~~~~~~~~~~~p- 238 (276)
T 2b4q_A 176 -----GE--QAYA---YGPSKAALHQLSRMLAKELVGEH-INVNVIAPGRFPSRMTRH---IAND--PQALEADSASIP- 238 (276)
T ss_dssp -----CC--SCTT---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCCCSTTTHH---HHHC--HHHHHHHHHTST-
T ss_pred -----CC--Cccc---cHHHHHHHHHHHHHHHHHhcccC-eEEEEEEeccCcCcchhh---cchh--HHHHHHhhcCCC-
Confidence 00 11 3 777766554 11 23 999999999998742110 0000 000011000111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|.++++++..+... ..|+.+++.++.
T Consensus 239 ------------~~r~~~p~dvA~~v~~l~s~~~~~-~tG~~i~vdGG~ 274 (276)
T 2b4q_A 239 ------------MGRWGRPEEMAALAISLAGTAGAY-MTGNVIPIDGGF 274 (276)
T ss_dssp ------------TSSCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTT
T ss_pred ------------CCCcCCHHHHHHHHHHHhCccccC-CCCCEEEeCCCc
Confidence 112568899999999988654321 346899998874
No 224
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=99.71 E-value=1e-15 Score=126.34 Aligned_cols=204 Identities=17% Similarity=0.076 Sum_probs=132.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
+|+|+||||+|+||++++++|+ +.|++|++++|+..+.. ....++.++++|++|.+++.++++ .
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALA-RDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999 68999999999865432 113478899999999999988876 4
Q ss_pred cCceeEEeecccccC----ChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 93 LEDVTHIFWVTWASQ----FASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 93 ~~~V~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
+|.++|.++...... +..+..+.+++|+.++.++++++.... ..-..++..++...+...
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~--------------- 145 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI--------------- 145 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC---------------
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC---------------
Confidence 566888877643322 455556689999999999999987641 111223333322111000
Q ss_pred CCCCCCCccchHHHHHHHHH-----H-hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhh
Q 042242 168 CPRVSKSNNFYYVLEDLLKE-----K-LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREI 240 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e-----~-~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (303)
+. ... |+.+|...+ + .... +++..++|+.+..+..... + ..
T Consensus 146 -~~--~~~---Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~-------------------~---~~---- 193 (235)
T 3l77_A 146 -PY--GGG---YVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK-------------------P---GK---- 193 (235)
T ss_dssp -TT--CHH---HHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC-------------------S---CC----
T ss_pred -CC--cch---HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc-------------------C---Cc----
Confidence 00 122 777666554 1 1122 9999999998876321110 0 00
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|+++++++..+... ..+++....+++.
T Consensus 194 --~~~~~~~~p~dva~~v~~l~~~~~~~-~~~~~~~~~~~~~ 232 (235)
T 3l77_A 194 --PKEKGYLKPDEIAEAVRCLLKLPKDV-RVEELMLRSVYQR 232 (235)
T ss_dssp --CGGGTCBCHHHHHHHHHHHHTSCTTC-CCCEEEECCTTSC
T ss_pred --ccccCCCCHHHHHHHHHHHHcCCCCC-ccceEEEeecccC
Confidence 11113568899999999998877643 3345555555543
No 225
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=99.71 E-value=3.9e-15 Score=126.52 Aligned_cols=220 Identities=11% Similarity=0.046 Sum_probs=139.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc----------------cc-------ccCCCeEEEEecCCC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI----------------TA-------IQSSSYCFISCDLLN 82 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----------------~~-------~~~~~~~~~~~D~~~ 82 (303)
..+|+++||||+|+||++++++|+ +.|++|++++|++.. .. ....++.++.+|++|
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLA-QEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 357899999999999999999999 689999999987321 00 113468889999999
Q ss_pred HHHHHHHHh-------ccCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeeccc
Q 042242 83 PLDIKRKLT-------LLEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMK 147 (303)
Q Consensus 83 ~~~l~~~~~-------~~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~ 147 (303)
.++++++++ .+|.++|.++.... ..+..+..+.+++|+.++.++++++.... .+-.+++.+++..
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 167 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG 167 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence 999888776 46678888765332 22445556689999999999999887651 1123555555433
Q ss_pred ccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhH
Q 042242 148 HYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGC 217 (303)
Q Consensus 148 ~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~ 217 (303)
.+... ..... |+.+|...+ +. .+ +++..++|+.|..+...... ....
T Consensus 168 ~~~~~------------------~~~~~---Y~asKaa~~~~~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~-~~~~ 224 (286)
T 3uve_A 168 GLKAY------------------PHTGH---YVAAKHGVVGLMRAFGVELGQHM-IRVNSVHPTHVKTPMLHNEG-TFKM 224 (286)
T ss_dssp GTSCC------------------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSBSSTTTSSHH-HHHH
T ss_pred hccCC------------------CCccH---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEecCcccCCcccccc-hhhh
Confidence 32110 00122 777766443 22 23 99999999999885322110 0000
Q ss_pred H---------HHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 218 L---------CVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 218 ~---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
+ .......+. .. ..+ ..+.+++|+|.++++++...... ..|+.+++.+|..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~-~~--~~p----------~r~~~p~dvA~~v~fL~s~~a~~-itG~~i~vdGG~~l 285 (286)
T 3uve_A 225 FRPDLENPGPDDMAPICQM-FH--TLP----------IPWVEPIDISNAVLFFASDEARY-ITGVTLPIDAGSCL 285 (286)
T ss_dssp HCTTSSSCCHHHHHHHHHT-TC--SSS----------CSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGG
T ss_pred ccccccccchhhHHHHHHh-hh--ccC----------CCcCCHHHHHHHHHHHcCccccC-CcCCEEeECCcccc
Confidence 0 000000000 00 001 23568899999999988654322 45689999988543
No 226
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=99.71 E-value=9.2e-16 Score=128.47 Aligned_cols=215 Identities=12% Similarity=0.103 Sum_probs=137.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc--cc-----c--cCCCeEEEEecCCCHHHHHHHHh------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI--TA-----I--QSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
|+|+++||||+|+||++++++|+ +.|++|++++|++.. .. . ...++.++.+|++|.++++++++
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLA-ADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999 679999999998654 21 1 13468889999999998888776
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCc-cEEEEeecccccccccCCCcccccCC
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KAL-KHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~-~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.++|.++.... ..+..+..+.+++|+.++.++++++.... .+. .+++.+++...+.+.
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 148 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF----------- 148 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC-----------
Confidence 56778888765322 22344555689999999999999887641 122 455555543232110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHH--------HH-HHHH
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCL--------CV-YGAV 224 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~--------~~-~~~~ 224 (303)
.+... |+.+|...+ +. .+ +++.+++|+.+..+... ...... .. ...+
T Consensus 149 -------~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~ 214 (258)
T 3a28_C 149 -------PILSA---YSTTKFAVRGLTQAAAQELAPKG-HTVNAYAPGIVGTGMWE---QIDAELSKINGKPIGENFKEY 214 (258)
T ss_dssp -------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBCSHHHH---HHHHHHHHHHCCCTTHHHHHH
T ss_pred -------CCchh---HHHHHHHHHHHHHHHHHHHHhhC-eEEEEEECCccCChhhh---hhhhhhccccCCchHHHHHHH
Confidence 00222 777666554 11 23 99999999998763110 000000 00 0000
Q ss_pred hhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 225 CKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 225 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
.. .. .+..+.+++|+|.++++++..+... ..|+.+++.++..+
T Consensus 215 ~~--~~-------------p~~r~~~p~dvA~~v~~l~s~~~~~-~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 215 SS--SI-------------ALGRPSVPEDVAGLVSFLASENSNY-VTGQVMLVDGGMLY 257 (258)
T ss_dssp HT--TC-------------TTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESSSSCC
T ss_pred Hh--cC-------------CCCCccCHHHHHHHHHHHhCcccCC-CCCCEEEECCCEec
Confidence 00 01 1123678899999999988654321 34689999887543
No 227
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=99.71 E-value=1.9e-15 Score=127.38 Aligned_cols=219 Identities=11% Similarity=-0.015 Sum_probs=138.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
.+.+|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999 68999999887654321 1235688999999999998887764
Q ss_pred ---cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 ---LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ---~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.++.... ..+..+..+.+++|+.++.++++++.....+-.+++.+++.... .
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~---- 158 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK-----------D---- 158 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT-----------T----
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc-----------c----
Confidence 4668888765432 22445556689999999999999988763333345555442110 0
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCcc-ch------hhHHHHHHHHhhhC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLY-NF------LGCLCVYGAVCKHL 228 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~-~~------~~~~~~~~~~~~~~ 228 (303)
.+..+..+ |+.+|...+ +. .+ +++..++|+.+.++...... .. ............
T Consensus 159 --~~~~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (270)
T 3is3_A 159 --FSVPKHSL---YSGSKGAVDSFVRIFSKDCGDKK-ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH-- 230 (270)
T ss_dssp --CCCTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHH--
T ss_pred --CCCCCCch---hHHHHHHHHHHHHHHHHHhcccC-eEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHh--
Confidence 00001223 777766554 11 23 99999999999874211000 00 000000000000
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
. ..+..+.+++|+|.++++++...... ..|+.+++.+|.
T Consensus 231 ~-------------~p~~r~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdGG~ 269 (270)
T 3is3_A 231 A-------------SPLHRNGWPQDVANVVGFLVSKEGEW-VNGKVLTLDGGA 269 (270)
T ss_dssp H-------------STTCSCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTC
T ss_pred c-------------CCCCCCCCHHHHHHHHHHHcCCccCC-ccCcEEEeCCCC
Confidence 0 12223567899999999988654322 346899998874
No 228
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=99.71 E-value=1.2e-15 Score=128.43 Aligned_cols=213 Identities=12% Similarity=0.047 Sum_probs=137.2
Q ss_pred CCCCEEEEEcCCC-hhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---cCCCeEEEEecCCCHHHHHHHHhc----
Q 042242 26 DAKNVAVIFGVTG-LVGKELARRLISTANWKVYGIARKPEITA-----I---QSSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG-~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
+.+|+|+||||+| .||++++++|+ +.|++|++++|+..... . ...++.++.+|++|.++++++++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRAL-LEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3578999999998 59999999999 68999999999875432 1 124788999999999998888764
Q ss_pred ---cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccC
Q 042242 93 ---LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 ---~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.++.... ..+..+..+.+++|+.++.++++++.... ..-.+++.+++...+...
T Consensus 99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 168 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ---------- 168 (266)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC----------
T ss_pred hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC----------
Confidence 4668888775332 22445555689999999999999987651 123455555543222110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+... |+.+|...+ +. .+ +++.+++|+.+..+....... .. .. ..
T Consensus 169 --------~~~~~---Y~~sKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~~--~~------~~-----~~ 223 (266)
T 3o38_A 169 --------HSQSH---YAAAKAGVMALTRCSAIEAVEFG-VRINAVSPSIARHKFLEKTSS--SE------LL-----DR 223 (266)
T ss_dssp --------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCCCC---------------------------
T ss_pred --------CCCch---HHHHHHHHHHHHHHHHHHHHHcC-cEEEEEeCCcccchhhhccCc--HH------HH-----HH
Confidence 01223 777766554 11 23 999999999998742211100 00 00 00
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.... ..+..+.+++|+|.++++++...... ..|+.+++.+|.
T Consensus 224 ~~~~------~~~~r~~~~~dva~~i~~l~s~~~~~-~tG~~i~vdgG~ 265 (266)
T 3o38_A 224 LASD------EAFGRAAEPWEVAATIAFLASDYSSY-MTGEVVSVSSQR 265 (266)
T ss_dssp ---C------CTTSSCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESSCC
T ss_pred HHhc------CCcCCCCCHHHHHHHHHHHcCccccC-ccCCEEEEcCCc
Confidence 0011 12233678899999999988754322 456899998874
No 229
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=99.70 E-value=6.1e-16 Score=131.06 Aligned_cols=217 Identities=14% Similarity=0.079 Sum_probs=136.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLA-ARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 68999999999865432 1134688999999999988887763
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhh--c--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILP--R--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~--~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.++|.|+.... ..+..+..+.+++|+.++.++++++.. . .....+++.+++...+.+.
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~------------ 169 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV------------ 169 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC------------
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC------------
Confidence 4668888765332 223445556889999999999998865 1 1122355555543232110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccc-----hh-hHHHHHHHHhhhC
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYN-----FL-GCLCVYGAVCKHL 228 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~-----~~-~~~~~~~~~~~~~ 228 (303)
.+..+ |+.+|...+ +. .+ +++.+++|+.|.++....... .. ..-.....+..
T Consensus 170 ------~~~~~---Y~asKaa~~~l~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (279)
T 3sju_A 170 ------MYAAP---YTASKHGVVGFTKSVGFELAKTG-ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNA-- 237 (279)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHTGGGT-EEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHT--
T ss_pred ------CCChh---HHHHHHHHHHHHHHHHHHHHhhC-cEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHh--
Confidence 00223 787776443 11 23 999999999998731110000 00 00000000100
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.. .+..+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 238 ~~-------------p~~r~~~pedvA~~v~~L~s~~a~~-itG~~i~vdGG~~ 277 (279)
T 3sju_A 238 KI-------------PLGRYSTPEEVAGLVGYLVTDAAAS-ITAQALNVCGGLG 277 (279)
T ss_dssp TC-------------TTSSCBCHHHHHHHHHHHTSSGGGG-CCSCEEEESTTCC
T ss_pred cC-------------CCCCCCCHHHHHHHHHHHhCccccC-cCCcEEEECCCcc
Confidence 11 1223568899999999888655322 4468999988753
No 230
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.70 E-value=1e-15 Score=128.51 Aligned_cols=215 Identities=14% Similarity=0.121 Sum_probs=137.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|++|.++++++++. +|
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFA-REGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 456899999999999999999999 68999999999865432 1124688899999999998887765 46
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
.++|.++.... ..+..+..+.+++|+.++.++++++.....+..+++.+++...| +..
T Consensus 83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~----------------- 144 (263)
T 2a4k_A 83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF----------------- 144 (263)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH-----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC-----------------
Confidence 68888765322 12334445688999999999999987653213355555543333 110
Q ss_pred CCCCccchHHHHHHH--------HHHhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 171 VSKSNNFYYVLEDLL--------KEKLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~--------~e~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
+... |+.+|.. ....... +++++++|+.+.++..... . ... ...+.. ..|
T Consensus 145 -~~~~---Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~--~~~--~~~~~~--~~p---------- 203 (263)
T 2a4k_A 145 -GLAH---YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-P--PWA--WEQEVG--ASP---------- 203 (263)
T ss_dssp -HHHH---HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-C--HHH--HHHHHH--TST----------
T ss_pred -CcHH---HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-C--HHH--HHHHHh--cCC----------
Confidence 0111 4443322 1111222 9999999999988532211 0 110 011111 112
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
+..+.+++|+|.++++++..+... ..|+.+++.++..+.
T Consensus 204 ---~~~~~~p~dvA~~v~~l~s~~~~~-~tG~~i~vdgG~~~~ 242 (263)
T 2a4k_A 204 ---LGRAGRPEEVAQAALFLLSEESAY-ITGQALYVDGGRSIV 242 (263)
T ss_dssp ---TCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTTTC
T ss_pred ---CCCCcCHHHHHHHHHHHhCccccC-CcCCEEEECCCcccc
Confidence 112568899999999988654322 346889998886543
No 231
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=99.70 E-value=4.4e-16 Score=129.99 Aligned_cols=211 Identities=13% Similarity=0.083 Sum_probs=133.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEEEecC--CCHHHHHHHHh---
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFISCDL--LNPLDIKRKLT--- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~D~--~~~~~l~~~~~--- 91 (303)
.+++|+|+||||+|+||++++++|+ +.|++|++++|+...... ...++.++.+|+ +|.++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYA-RYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 4567899999999999999999999 689999999998655320 123678899999 88988877776
Q ss_pred ----ccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccc
Q 042242 92 ----LLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 92 ----~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
.+|.++|.++... ...+..+..+.+++|+.++..+++++... ..+..+++.+++...+.+.
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-------- 159 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR-------- 159 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC--------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC--------
Confidence 4566888876521 22334445568999999999999998654 1223455555543222110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.+..+ |+.+|...+ +... +++..+.|+.+..+. . .. ... ..+
T Consensus 160 ----------~~~~~---Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~---~----~~------~~~--~~~ 210 (252)
T 3f1l_A 160 ----------ANWGA---YAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAM---R----AS------AFP--TED 210 (252)
T ss_dssp ----------TTCHH---HHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHH---H----HH------HCT--TCC
T ss_pred ----------CCCch---hHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCch---h----hh------hCC--ccc
Confidence 00223 777766554 1223 888999988776521 0 00 000 000
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHh
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
...+.+++|+|.++++++...... ..|+.+++.+|...++.|
T Consensus 211 -------------~~~~~~p~dva~~~~~L~s~~~~~-itG~~i~vdgG~~~~~~q 252 (252)
T 3f1l_A 211 -------------PQKLKTPADIMPLYLWLMGDDSRR-KTGMTFDAQPGRKPGISQ 252 (252)
T ss_dssp -------------GGGSBCTGGGHHHHHHHHSGGGTT-CCSCEEESSCC-------
T ss_pred -------------hhccCCHHHHHHHHHHHcCccccC-CCCCEEEeCCCcCCCCCC
Confidence 011456778899998887655322 456899999998777654
No 232
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=99.70 E-value=1.4e-15 Score=127.94 Aligned_cols=220 Identities=14% Similarity=0.067 Sum_probs=137.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c----cCCCeEEEEecCCCHHHHHHHHhc----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I----QSSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~----~~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
+++|++|||||+|+||++++++|+ +.|++|++++|+..+.. . ...++.++.+|++|.++++++++.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLL-EAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999 68999999999865432 0 122488899999999988877763
Q ss_pred ---cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 ---LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 ---~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|.++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+.+.
T Consensus 85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 153 (265)
T 3lf2_A 85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE----------- 153 (265)
T ss_dssp HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC-----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC-----------
Confidence 4668888765322 2344555668999999999999998764 1223344444442222110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccch----hhHHHHHHH-HhhhC
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNF----LGCLCVYGA-VCKHL 228 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~-~~~~~ 228 (303)
.....|+.+|...+ +. .+ +++..++|+.+.++........ ......+.. +.+..
T Consensus 154 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~g-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (265)
T 3lf2_A 154 ----------PHMVATSAARAGVKNLVRSMAFEFAPKG-VRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNK 222 (265)
T ss_dssp ----------TTBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHT
T ss_pred ----------CCchhhHHHHHHHHHHHHHHHHHhcccC-eEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhcc
Confidence 01122777665443 22 23 9999999999987321100000 000000000 11100
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..| +..+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 223 ~~p-------------~~r~~~pedvA~~v~fL~s~~~~~-itG~~i~vdGG~~ 262 (265)
T 3lf2_A 223 QIP-------------LGRLGKPIEAARAILFLASPLSAY-TTGSHIDVSGGLS 262 (265)
T ss_dssp TCT-------------TCSCBCHHHHHHHHHHHHSGGGTT-CCSEEEEESSSCC
T ss_pred CCC-------------cCCCcCHHHHHHHHHHHhCchhcC-cCCCEEEECCCCc
Confidence 111 123568899999999988654322 4568999988764
No 233
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=99.70 E-value=3.2e-15 Score=127.85 Aligned_cols=221 Identities=10% Similarity=0.055 Sum_probs=139.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc------------cc-------ccCCCeEEEEecCCCHHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI------------TA-------IQSSSYCFISCDLLNPLDI 86 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~------------~~-------~~~~~~~~~~~D~~~~~~l 86 (303)
+.+|++|||||+|+||++++++|+ +.|++|++++|++.. .. ....++.++++|++|.+++
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLA-REGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 356899999999999999999999 689999999987321 00 1134688999999999998
Q ss_pred HHHHh-------ccCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc---cCCccEEEEeeccccccc
Q 042242 87 KRKLT-------LLEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR---AKALKHVSLQTGMKHYVS 151 (303)
Q Consensus 87 ~~~~~-------~~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~~~~~s~~~~y~~ 151 (303)
+++++ .+|.++|.++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+.+
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 184 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG 184 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence 88776 45668888765322 2245555678999999999999987654 122345555554323211
Q ss_pred ccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccch--h----
Q 042242 152 LQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNF--L---- 215 (303)
Q Consensus 152 ~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~--~---- 215 (303)
. ..... |+.+|...+ +. .+ +++..++||.|.++........ .
T Consensus 185 ~------------------~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 242 (299)
T 3t7c_A 185 A------------------ENIGN---YIASKHGLHGLMRTMALELGPRN-IRVNIVCPSSVATPMLLNEPTYRMFRPDL 242 (299)
T ss_dssp C------------------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESCBSSTTTSSHHHHHHHCTTS
T ss_pred C------------------CCcch---HHHHHHHHHHHHHHHHHHhcccC-cEEEEEecCCccCccccccchhhhhhhhh
Confidence 0 00222 777766544 22 24 9999999999988532211000 0
Q ss_pred --hHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 216 --GCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 216 --~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
.....+....+... ..+ ..+.+++|+|.++++++...... ..|+.+++.+|..+
T Consensus 243 ~~~~~~~~~~~~~~~~---~~p----------~r~~~pedvA~~v~fL~s~~a~~-itG~~i~vdGG~~l 298 (299)
T 3t7c_A 243 ENPTVEDFQVASRQMH---VLP----------IPYVEPADISNAILFLVSDDARY-ITGVSLPVDGGALL 298 (299)
T ss_dssp SSCCHHHHHHHHHHHS---SSS----------CSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGGG
T ss_pred ccchhhHHHHHhhhhc---ccC----------cCCCCHHHHHHHHHHHhCccccc-CcCCEEeeCCCccc
Confidence 00000000000000 001 23568899999999988654322 44689999988543
No 234
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=99.70 E-value=1.2e-16 Score=133.62 Aligned_cols=225 Identities=12% Similarity=0.025 Sum_probs=131.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc----CceeEEeeccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL----EDVTHIFWVTW 104 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~----~~V~~~~~~~~ 104 (303)
|+|+||||+|+||++++++|+ +.|++|++++|++.+... . +.+|++|.++++++++.. |.++|.|+...
T Consensus 2 k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~-----~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLE-AAGHQIVGIDIRDAEVIA-----D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSSSSEEC-----C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCchhhcc-----c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 689999999999999999999 689999999998765321 1 568999999999998765 66888876543
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC---------CCCC
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP---------RVSK 173 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~---------~~p~ 173 (303)
.... . .+.+++|+.++.++++++... ..+..+++.+++...|..... .+.. .....+.+. ..+.
T Consensus 75 ~~~~-~--~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T 1fjh_A 75 QTKV-L--GNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFD-KNPL-ALALEAGEEAKARAIVEHAGEQ 149 (257)
T ss_dssp TCSS-H--HHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGG-GCTT-HHHHHHTCHHHHHHHHHTCCTT
T ss_pred Cccc-H--HHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccc-cchh-hhhhcccchhhhhhhhhcccCC
Confidence 1222 3 348999999999999998754 122346666665544421100 0000 000000000 0111
Q ss_pred CccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhh
Q 042242 174 SNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 174 ~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (303)
.+...|+.+|...+ +. .+ +++++++|+.+.++....... ... ...... .+ . .
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~~--~~~--~~~~~~----~~---~------~ 211 (257)
T 1fjh_A 150 GGNLAYAGSKNALTVAVRKRAAAWGEAG-VRLNTIAPGATETPLLQAGLQ--DPR--YGESIA----KF---V------P 211 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHTT-CEEEEEEECC-----------------------------C---C------C
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhcC-eEEEEEeeCCCCCccchhhcc--chh--HHHHHH----hc---c------c
Confidence 12234787777554 11 23 999999999998843211100 000 000000 00 0 1
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
.+..+.+++|+|.++++++..+... ..|+.|++.++...+
T Consensus 212 ~~~~~~~~~dvA~~~~~l~~~~~~~-~tG~~~~vdgG~~~~ 251 (257)
T 1fjh_A 212 PMGRRAEPSEMASVIAFLMSPAASY-VHGAQIVIDGGIDAV 251 (257)
T ss_dssp STTSCCCTHHHHHHHHHHTSGGGTT-CCSCEEEESTTHHHH
T ss_pred ccCCCCCHHHHHHHHHHHhCchhcC-CcCCEEEECCCcccc
Confidence 1113678899999999988665321 345889888875443
No 235
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=99.70 E-value=1.2e-15 Score=129.42 Aligned_cols=213 Identities=16% Similarity=0.119 Sum_probs=137.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc------cCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL------LEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~------~~~V 96 (303)
.+|+||||||+|+||++++++|+ +.|++|++++|+..+.. ....++.++++|++|.++++++++. .|.+
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLH-ADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 46799999999999999999999 68999999999876532 1235788999999999999888874 3446
Q ss_pred eEE-eecccc---------cCChHHHHHHHHHHHHHHHHHHHHHhhcc--------CCccEEEEeecccccccccCCCcc
Q 042242 97 THI-FWVTWA---------SQFASDMHKCCEQNKAMMCNALNAILPRA--------KALKHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 97 ~~~-~~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--------~~~~~~~~~s~~~~y~~~~~~~g~ 158 (303)
+|. +..... ........+.+++|+.++.++++++.... ..-.+++.+++...+...
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 181 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ------ 181 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC------
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC------
Confidence 676 322211 22334455689999999999999887541 123355555543332110
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhC
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHL 228 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
.+... |+.+|...+ +. .+ +++.+++|+.|..+..... ... ....+..
T Consensus 182 ------------~~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~~~~~~---~~~--~~~~~~~-- 238 (281)
T 3ppi_A 182 ------------IGQTA---YAAAKAGVIGLTIAAARDLSSAG-IRVNTIAPGTMKTPIMESV---GEE--ALAKFAA-- 238 (281)
T ss_dssp ------------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCHHHHTT---CHH--HHHHHHH--
T ss_pred ------------CCCcc---cHHHHHHHHHHHHHHHHHHhhcC-eEEEEEecCcCCchhhhcc---cHH--HHHHHHh--
Confidence 00223 777776443 21 23 9999999999876311110 011 0011111
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
..+. + ..+.+++|+|+++++++.++... |+.+++.++..++
T Consensus 239 ~~~~--~----------~~~~~pedvA~~v~~l~s~~~~t---G~~i~vdGG~~~~ 279 (281)
T 3ppi_A 239 NIPF--P----------KRLGTPDEFADAAAFLLTNGYIN---GEVMRLDGAQRFT 279 (281)
T ss_dssp TCCS--S----------SSCBCHHHHHHHHHHHHHCSSCC---SCEEEESTTCCCC
T ss_pred cCCC--C----------CCCCCHHHHHHHHHHHHcCCCcC---CcEEEECCCcccC
Confidence 1111 1 12568899999999998765433 5999999987654
No 236
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=99.70 E-value=2.5e-15 Score=126.46 Aligned_cols=225 Identities=15% Similarity=0.071 Sum_probs=139.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-------c--CCCeEEEEecCCCHHHHHHHHhc---cC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-------Q--SSSYCFISCDLLNPLDIKRKLTL---LE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~--~~~~~~~~~D~~~~~~l~~~~~~---~~ 94 (303)
++|++|||||+|+||++++++|+ +.|++|++++|+...... . ...+..+.+|+++.++++++++. +|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLV-AEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 46899999999999999999999 689999999998654320 1 23567889999999999888874 56
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.|+.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+...
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 151 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS---------------- 151 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC----------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC----------------
Confidence 68888765332 2234455568999999988888776654 1233455555543332110
Q ss_pred CCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccch------hhHHHHHHHHhhhCCCcee
Q 042242 169 PRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNF------LGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 233 (303)
.+..+ |+.+|...+ + .... +++..++|+.+..+........ ...-......... ..
T Consensus 152 --~~~~~---Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 222 (267)
T 3t4x_A 152 --QEMAH---YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKE-NR--- 222 (267)
T ss_dssp --TTCHH---HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHH-HC---
T ss_pred --CcchH---HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhc-cC---
Confidence 00223 777776554 1 1223 8999999998887311000000 0000000000000 00
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccH
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTW 285 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~ 285 (303)
+. ..+..+.+++|+|.++++++...... ..|+.+++.+|...++
T Consensus 223 -~~------~~~~r~~~pedvA~~v~fL~s~~~~~-itG~~i~vdGG~~~si 266 (267)
T 3t4x_A 223 -PT------SIIQRLIRPEEIAHLVTFLSSPLSSA-INGSALRIDGGLVRSV 266 (267)
T ss_dssp -TT------CSSCSCBCTHHHHHHHHHHHSGGGTT-CCSCEEEESTTCSCSC
T ss_pred -Cc------ccccCccCHHHHHHHHHHHcCccccC-ccCCeEEECCCccccc
Confidence 00 11234678899999999987654322 4569999999877653
No 237
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.69 E-value=1.1e-15 Score=127.23 Aligned_cols=212 Identities=14% Similarity=0.099 Sum_probs=129.9
Q ss_pred CCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh---ccCceeEE
Q 042242 23 REVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT---LLEDVTHI 99 (303)
Q Consensus 23 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~---~~~~V~~~ 99 (303)
.....+|+|+||||+|+||++++++|+ +.|++|++++|++...... ..+.++ +|+ .++++++++ .+|.++|.
T Consensus 14 ~~~~~~k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~-~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~ 88 (249)
T 1o5i_A 14 ELGIRDKGVLVLAASRGIGRAVADVLS-QEGAEVTICARNEELLKRS-GHRYVV-CDL--RKDLDLLFEKVKEVDILVLN 88 (249)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHT-CSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred HhccCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCCHHHHHhh-CCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence 445567999999999999999999999 6899999999986432211 356667 999 334444444 56778898
Q ss_pred eecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 100 FWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 100 ~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
|+.... .....+..+.+++|+.++..+.+++... ..+..+++.+|+...|...
T Consensus 89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------- 147 (249)
T 1o5i_A 89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI--------------------- 147 (249)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC---------------------
Confidence 765322 2234455568899999988776665443 1123456666554333110
Q ss_pred CccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHH-HHhhhCCCceeeCCchhhhh
Q 042242 174 SNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYG-AVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 174 ~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~ 242 (303)
.+...|+.+|...+ .. .+ +++++++|+.+.++.... ..... .. .+.. ..|
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t~~~~~---~~~~~--~~~~~~~--~~p----------- 208 (249)
T 1o5i_A 148 ENLYTSNSARMALTGFLKTLSFEVAPYG-ITVNCVAPGWTETERVKE---LLSEE--KKKQVES--QIP----------- 208 (249)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCCTTHHH---HSCHH--HHHHHHT--TST-----------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcC-eEEEEEeeCCCccCcccc---cchhh--HHHHHHh--cCC-----------
Confidence 01112776665443 11 24 999999999999842110 00010 00 1111 111
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|+++++++..+... ..|+.|++.++..
T Consensus 209 --~~~~~~~~dvA~~i~~l~s~~~~~-~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 209 --MRRMAKPEEIASVVAFLCSEKASY-LTGQTIVVDGGLS 245 (249)
T ss_dssp --TSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTCC
T ss_pred --CCCCcCHHHHHHHHHHHcCccccC-CCCCEEEECCCcc
Confidence 123668899999999888654322 3458999988753
No 238
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=99.69 E-value=2.3e-15 Score=127.77 Aligned_cols=220 Identities=14% Similarity=0.018 Sum_probs=137.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.+++.++++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356899999999999999999999 68999999999865311 113468889999999998877765
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
.+|.++|.++.... ..+..+..+.+++|+.++.++++++.....+..+++.+++...+...
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 171 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA-------------- 171 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS--------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC--------------
Confidence 35668888765422 22345555689999999999999988752223455555543222100
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCcc-chhh-----HHHHHHHHhhhCCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLY-NFLG-----CLCVYGAVCKHLNL 230 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~-~~~~-----~~~~~~~~~~~~~~ 230 (303)
..+...|+.+|...+ +. .+ +++.+++|+.+.++...... .+.. .......+.....
T Consensus 172 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 243 (283)
T 1g0o_A 172 ------VPKHAVYSGSKGAIETFARCMAIDMADKK-ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQW- 243 (283)
T ss_dssp ------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHS-
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHHhcccC-eEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcC-
Confidence 001122777766544 11 23 99999999999874211000 0000 0000000000000
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
..+..+.+++|+|.++++++...... ..|+.+++.++.
T Consensus 244 ------------~p~~r~~~p~dvA~~v~~l~s~~~~~-itG~~i~vdgG~ 281 (283)
T 1g0o_A 244 ------------SPLRRVGLPIDIARVVCFLASNDGGW-VTGKVIGIDGGA 281 (283)
T ss_dssp ------------CTTCSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTC
T ss_pred ------------CCCCCCcCHHHHHHHHHHHhCccccC-cCCCEEEeCCCc
Confidence 11123568899999999988654321 345889888874
No 239
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=99.69 E-value=5.1e-16 Score=128.72 Aligned_cols=201 Identities=9% Similarity=-0.023 Sum_probs=131.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh---------ccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT---------LLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~---------~~~~V~ 97 (303)
++|+|+||||+|+||++++++|+ +.|++|++++|++.... ....++.+|++|.++++++++ .+|.++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFR-ARNWWVASIDVVENEEA---SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESSCCTTS---SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-hCCCEEEEEeCChhhcc---CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 46899999999999999999999 68999999999876532 245677899999998887776 455688
Q ss_pred EEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 98 HIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 98 ~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
|.++... ......+..+.+++|+.++..+++++.....+-.+++.+++...+..
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------------- 140 (241)
T 1dhr_A 82 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG--------------------- 140 (241)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---------------------
T ss_pred EcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC---------------------
Confidence 8876532 12233444568899999999999998765211235555554323211
Q ss_pred CCccchHHHHHHHHH-----Hh---c--CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 173 KSNNFYYVLEDLLKE-----KL---A--GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e-----~~---~--~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
..+...|+.+|...+ +. . .. +++++++|+.+-.+. . .. ... ..
T Consensus 141 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~---~----~~------~~~--~~----------- 194 (241)
T 1dhr_A 141 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM---N----RK------SMP--EA----------- 194 (241)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH---H----HH------HST--TS-----------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc---c----cc------cCc--ch-----------
Confidence 001122787777554 11 1 23 999999999876521 0 00 000 00
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.+......+|+|.++++++...... ..|+.+++.++.
T Consensus 195 --~~~~~~~~~~vA~~v~~l~~~~~~~-~~G~~~~v~g~~ 231 (241)
T 1dhr_A 195 --DFSSWTPLEFLVETFHDWITGNKRP-NSGSLIQVVTTD 231 (241)
T ss_dssp --CGGGSEEHHHHHHHHHHHHTTTTCC-CTTCEEEEEEET
T ss_pred --hhccCCCHHHHHHHHHHHhcCCCcC-ccceEEEEeCCC
Confidence 0112356789999999888654322 346888887754
No 240
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=99.69 E-value=3.8e-16 Score=131.78 Aligned_cols=199 Identities=11% Similarity=0.010 Sum_probs=125.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
+++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++ .+|
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALA-GAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 356899999999999999999999 68999999999865432 113578899999999999888876 566
Q ss_pred ceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--C--CccEEEEeecccccccccCCCcccccCCcC
Q 042242 95 DVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRA--K--ALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 95 ~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~--~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.++|.|+.... ..+..+..+.+++|+.++..+++++.... . +-.+++.+++...+.+.
T Consensus 105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------- 171 (272)
T 4dyv_A 105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR------------- 171 (272)
T ss_dssp EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC-------------
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC-------------
Confidence 78888765322 23445556689999999999888877651 1 12355555543222110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+..+ |+.+|...+ .. .+ +++..++|+.|..+...... .. .+....
T Consensus 172 -----~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~---~~------------~~~~~~ 227 (272)
T 4dyv_A 172 -----PYSAP---YTATKHAITGLTKSTSLDGRVHD-IACGQIDIGNADTPMAQKMK---AG------------VPQADL 227 (272)
T ss_dssp -----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEEEECC-------------------------------
T ss_pred -----CCchH---HHHHHHHHHHHHHHHHHHhCccC-EEEEEEEECcccChhhhhhc---cc------------chhhhh
Confidence 00223 777766554 11 23 99999999998874221110 00 000000
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDIS 268 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~ 268 (303)
. .....+.+++|+|.++++++..+...
T Consensus 228 ~------~~~~~~~~pedvA~~v~fL~s~~~~~ 254 (272)
T 4dyv_A 228 S------IKVEPVMDVAHVASAVVYMASLPLDA 254 (272)
T ss_dssp --------------CHHHHHHHHHHHHHSCTTS
T ss_pred c------ccccCCCCHHHHHHHHHHHhCCCCcC
Confidence 0 11122568899999999999877653
No 241
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=99.69 E-value=3.4e-15 Score=124.71 Aligned_cols=214 Identities=13% Similarity=0.071 Sum_probs=135.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc-cc-------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI-TA-------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.+|+|+||||+|+||++++++|+ +.|++|++++++... .. ....++.++.+|+.|.++++..++.
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLA-NDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 46899999999999999999999 689999887554332 21 1234677889999999888776654
Q ss_pred -------cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccccc
Q 042242 93 -------LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 -------~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
+|.++|.++.... ........+.+++|+.++..+++++.....+-.+++.+++...+.+.
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~--------- 155 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL--------- 155 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC---------
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC---------
Confidence 5668888665322 22344445688999999999999988753223345555543222110
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.....|+.+|...+ +. .+ +++..++|+.+..+........ ..... .... ..
T Consensus 156 ------------~~~~~Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~~~-~~~~~--~~~~--~~- 216 (255)
T 3icc_A 156 ------------PDFIAYSMTKGAINTMTFTLAKQLGARG-ITVNAILPGFVKTDMNAELLSD-PMMKQ--YATT--IS- 216 (255)
T ss_dssp ------------TTBHHHHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCBCCSSSTTTTTS-HHHHH--HHHH--TS-
T ss_pred ------------CCcchhHHhHHHHHHHHHHHHHHHHhcC-eEEEEEEEeeecccchhhhccc-HHHHH--hhhc--cC-
Confidence 01122777766554 11 23 9999999999987532211110 00000 0100 11
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.+..+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 217 ------------~~~~~~~~~dva~~~~~l~s~~~~~-~tG~~i~vdgG~~ 254 (255)
T 3icc_A 217 ------------AFNRLGEVEDIADTAAFLASPDSRW-VTGQLIDVSGGSC 254 (255)
T ss_dssp ------------TTSSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESSSTT
T ss_pred ------------CcCCCCCHHHHHHHHHHHhCcccCC-ccCCEEEecCCee
Confidence 1123567899999999887644322 4569999988753
No 242
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=99.69 E-value=1.6e-15 Score=127.56 Aligned_cols=162 Identities=13% Similarity=0.059 Sum_probs=111.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCC---CeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHh---
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTAN---WKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLT--- 91 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~--- 91 (303)
...++|+||||||+|+||++++++|+ +.| ++|++++|+..... ....++.++.+|++|.++++++++
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~-~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALL-NLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHH-TSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHH-hcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 34456899999999999999999999 678 99999999876432 113478899999999998888876
Q ss_pred ------ccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhccC--------C-----ccEEEEeeccc
Q 042242 92 ------LLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRAK--------A-----LKHVSLQTGMK 147 (303)
Q Consensus 92 ------~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--------~-----~~~~~~~s~~~ 147 (303)
.+|.|+|+++... ......+..+.+++|+.++.++++++..... + ..+++.+++..
T Consensus 96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 175 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175 (267)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence 5777899976543 2233455556899999999999998876511 1 24566665543
Q ss_pred ccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceee
Q 042242 148 HYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLG 205 (303)
Q Consensus 148 ~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G 205 (303)
.+... + +..+..+ |+.+|...+ +. .+ ++++++||+.|..
T Consensus 176 ~~~~~----------~-----~~~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~Pg~v~t 224 (267)
T 1sny_A 176 GSIQG----------N-----TDGGMYA---YRTSKSALNAATKSLSVDLYPQR-IMCVSLHPGWVKT 224 (267)
T ss_dssp GCSTT----------C-----CSCCCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEECCCSBCS
T ss_pred ccccC----------C-----CCCCchH---HHHHHHHHHHHHHHHHHHhhcCC-cEEEEeCCcceec
Confidence 33111 0 0011223 777766554 11 23 9999999998876
No 243
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=99.69 E-value=8.2e-16 Score=128.46 Aligned_cols=220 Identities=15% Similarity=0.081 Sum_probs=134.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
|+|+++||||+|+||++++++|++.+ ++.|++++|+..... ....++.++.+|++|.++++++++ .+|
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 80 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID 80 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence 57899999999999999999998433 578999999865432 112468889999999999888776 456
Q ss_pred ceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.++.... ..+..+....+++|+.++..+++++... ..+-.+++.+++...+...
T Consensus 81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~---------------- 144 (254)
T 3kzv_A 81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYF---------------- 144 (254)
T ss_dssp EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSS----------------
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCC----------------
Confidence 68888765322 2244555568999999999999988543 1101345554443222100
Q ss_pred CCCCCCccchHHHHHHHHH-----Hh---cCCcceEEecCCceeecCCCCccchhh----HHHHHHHHhhhCCCceeeCC
Q 042242 169 PRVSKSNNFYYVLEDLLKE-----KL---AGKVAWSVHRPGLLLGSSHRSLYNFLG----CLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e-----~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g 236 (303)
.+... |+.+|...+ +. .+ +++..++|+.+..+.......... .......+.. .
T Consensus 145 --~~~~~---Y~asK~a~~~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~------- 209 (254)
T 3kzv_A 145 --SSWGA---YGSSKAALNHFAMTLANEERQ-VKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG--L------- 209 (254)
T ss_dssp --CCSHH---HHHHHHHHHHHHHHHHHHCTT-SEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH--H-------
T ss_pred --CCcch---HHHHHHHHHHHHHHHHhhccC-cEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH--H-------
Confidence 00222 777776554 11 23 999999999998853321110000 0000000000 0
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
.....+.+++|+|.++++++.........|+.+++.+++..
T Consensus 210 ------~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~~ 250 (254)
T 3kzv_A 210 ------KENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPALA 250 (254)
T ss_dssp ------HTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred ------HhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence 11223567889999999988665211144688988876543
No 244
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=99.69 E-value=1.4e-15 Score=127.62 Aligned_cols=191 Identities=19% Similarity=0.126 Sum_probs=124.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+.+|+||||||+|+||++++++|+ +.|++|++++|+..+.. ....++.++.+|++|.+++.++++.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLG-SLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 346899999999999999999999 68999999999876532 1134688899999999998887765
Q ss_pred -cCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 -LEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 -~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.++|.++... ...+..+..+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 173 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV------------ 173 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC------------
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC------------
Confidence 566888877521 22344555568999999999999987653 1233455555543222110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+... |+.+|...+ +. .+ +++.+++||.+..+..... .. .
T Consensus 174 ------~~~~~---Y~asKaa~~~l~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~----~~-----------~----- 223 (262)
T 3rkr_A 174 ------ADGAA---YTASKWGLNGLMTSAAEELRQHQ-VRVSLVAPGSVRTEFGVGL----SA-----------K----- 223 (262)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCC-------------------------------
T ss_pred ------CCCch---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEecCCCcCCccccc----cc-----------c-----
Confidence 00222 777765443 11 23 9999999998876321100 00 0
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~ 267 (303)
.......+++|+|+++++++..+..
T Consensus 224 --------~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 224 --------KSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp -------------CCCHHHHHHHHHHHHTCCTT
T ss_pred --------cccccCCCHHHHHHHHHHHhcCccc
Confidence 1111256889999999998876543
No 245
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=99.69 E-value=2.4e-15 Score=127.29 Aligned_cols=221 Identities=12% Similarity=0.020 Sum_probs=137.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc-------------ccc-------ccCCCeEEEEecCCCHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE-------------ITA-------IQSSSYCFISCDLLNPLD 85 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-------------~~~-------~~~~~~~~~~~D~~~~~~ 85 (303)
+.+|+++||||+|+||++++++|+ +.|++|++++|+.. ... ....++.++.+|++|.++
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMA-AEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHH-HcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 456899999999999999999999 68999999998421 110 113468889999999999
Q ss_pred HHHHHhc-------cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeeccccccc
Q 042242 86 IKRKLTL-------LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVS 151 (303)
Q Consensus 86 l~~~~~~-------~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~ 151 (303)
++++++. +|.++|.|+.... ..+..+..+.+++|+.++.++++++.... .+-.+++.+++...+..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 167 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM 167 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence 8887764 5668888765432 23445556689999999999999876541 11235555554333211
Q ss_pred ccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHH
Q 042242 152 LQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVY 221 (303)
Q Consensus 152 ~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~ 221 (303)
. + .... |+.+|...+ +. .+ +++..++|+.+..+..... ..... .
T Consensus 168 ~----------------~--~~~~---Y~asKaa~~~~~~~la~e~~~~g-i~vn~v~PG~v~T~~~~~~--~~~~~--~ 221 (277)
T 3tsc_A 168 Q----------------P--FMIH---YTASKHAVTGLARAFAAELGKHS-IRVNSVHPGPVNTPMGSGD--MVTAV--G 221 (277)
T ss_dssp C----------------S--SCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSBSSGGGSHH--HHHHH--H
T ss_pred C----------------C--Cchh---hHHHHHHHHHHHHHHHHHhCccC-eEEEEEEeCCCcCCcccch--hhhhh--h
Confidence 0 0 0222 777766544 22 23 9999999999987422110 00000 0
Q ss_pred HHHhhh-CCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 222 GAVCKH-LNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 222 ~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...... ......... .. ..+.+++|+|.++++++...... ..|+.+++.+|.
T Consensus 222 ~~~~~~~~~~~~~~~~------~p-~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG~ 274 (277)
T 3tsc_A 222 QAMETNPQLSHVLTPF------LP-DWVAEPEDIADTVCWLASDESRK-VTAAQIPVDQGS 274 (277)
T ss_dssp HHHHTCGGGTTTTCCS------SS-CSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTG
T ss_pred hcccccHHHHHHhhhc------cC-CCCCCHHHHHHHHHHHhCccccC-CcCCEEeeCCCc
Confidence 000000 000000000 11 13678999999999988655432 446899998874
No 246
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=99.69 E-value=8.4e-16 Score=129.68 Aligned_cols=122 Identities=16% Similarity=0.064 Sum_probs=91.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
.+|+|+||||+|+||++++++|+ + .|++|++++|+..+.. . ...++.++.+|++|.++++++++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~-~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLC-RLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHH-HHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999 6 7999999999865421 0 13468899999999999888887
Q ss_pred ccCceeEEeecccccC---C-hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccccc
Q 042242 92 LLEDVTHIFWVTWASQ---F-ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHY 149 (303)
Q Consensus 92 ~~~~V~~~~~~~~~~~---~-~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y 149 (303)
.+|.|+|+|+...... . ..+..+.+++|+.++.++++++.....+-.+++++|+...|
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~ 143 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV 143 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhh
Confidence 5667889876543221 1 24455689999999999999998763222356666654444
No 247
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=99.68 E-value=8.3e-16 Score=132.67 Aligned_cols=158 Identities=20% Similarity=0.158 Sum_probs=110.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCC--CeEEEEecCCCHHHHHHHHhcc---
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSS--SYCFISCDLLNPLDIKRKLTLL--- 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~--~~~~~~~D~~~~~~l~~~~~~~--- 93 (303)
+++|+||||||+|+||++++++|+ ..|++|++++|+..+.. . ... .+.++.+|++|.+++.++++.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~-~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLL-NQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999 68999999999876532 0 112 6889999999999988888644
Q ss_pred ----CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc-C-------CccEEEEeecccccccccCCCc
Q 042242 94 ----EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA-K-------ALKHVSLQTGMKHYVSLQGLPE 157 (303)
Q Consensus 94 ----~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-------~~~~~~~~s~~~~y~~~~~~~g 157 (303)
|.++|.|+... ...+..+..+.+++|+.++.++++++.... . +-.+++.+|+...+.+.
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~----- 159 (319)
T 3ioy_A 85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA----- 159 (319)
T ss_dssp TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC-----
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC-----
Confidence 56888876532 222445555689999999999999887652 1 13345555543333111
Q ss_pred ccccCCcCcCCCCCCCCccchHHHHHH----HHH-----Hh-cCCcceEEecCCceeec
Q 042242 158 EKQVRFYDEECPRVSKSNNFYYVLEDL----LKE-----KL-AGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 158 ~~~~~~~~e~~~~~p~~~~~~y~~~k~----~~e-----~~-~~~~~~~ilRp~~v~G~ 206 (303)
+ .... |+.+|. +.+ +. .+ +++++++|+.|.++
T Consensus 160 -----------~--~~~~---Y~aSKaal~~~~~~la~e~~~~g-i~v~~v~PG~v~T~ 201 (319)
T 3ioy_A 160 -----------G--SPGI---YNTTKFAVRGLSESLHYSLLKYE-IGVSVLCPGLVKSY 201 (319)
T ss_dssp -----------S--SSHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEECCCCBC--
T ss_pred -----------C--CCHH---HHHHHHHHHHHHHHHHHHhhhcC-CEEEEEEcCeEccC
Confidence 0 0122 888777 333 22 23 99999999999874
No 248
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=99.68 E-value=5.8e-15 Score=127.29 Aligned_cols=221 Identities=14% Similarity=0.078 Sum_probs=136.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc------------c-------ccCCCeEEEEecCCCHHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT------------A-------IQSSSYCFISCDLLNPLDIK 87 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~------------~-------~~~~~~~~~~~D~~~~~~l~ 87 (303)
.+|+||||||+|+||+++++.|+ +.|++|++++|+.... . ....++.++++|++|.++++
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la-~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLA-QDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 46899999999999999999999 6899999998863211 0 11346888999999999988
Q ss_pred HHHh-------ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeeccccccccc
Q 042242 88 RKLT-------LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQ 153 (303)
Q Consensus 88 ~~~~-------~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~ 153 (303)
++++ .+|.++|.|+.... ..+..+..+.+++|+.++..+++++.... ..-.+++.+++...+.+.
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~- 202 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA- 202 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC-
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC-
Confidence 8876 45678888765432 23445556689999999999999886541 112345555543232110
Q ss_pred CCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHH
Q 042242 154 GLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA 223 (303)
Q Consensus 154 ~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 223 (303)
.....|+.+|...+ +. .+ +++..++|+.|.++..... .. ...
T Consensus 203 --------------------~~~~~Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~-----~~--~~~ 254 (317)
T 3oec_A 203 --------------------PGQSHYAASKHGVQGLMLSLANEVGRHN-IRVNSVNPGAVNTEMALNE-----KL--LKM 254 (317)
T ss_dssp --------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBSSHHHHCH-----HH--HHH
T ss_pred --------------------CCCcchHHHHHHHHHHHHHHHHHHhhcC-eEEEEEecCcccCccccch-----hh--hhh
Confidence 01122777766544 21 24 9999999999987421100 00 000
Q ss_pred HhhhCCCcee------eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 224 VCKHLNLPFV------FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 224 ~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+......+.. +.... .....+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~pedvA~av~fL~s~~a~~-itG~~i~vdGG~~ 314 (317)
T 3oec_A 255 FLPHLENPTREDAAELFSQLT----LLPIPWVEPEDVSNAVAWLASDEARY-IHGAAIPVDGGQL 314 (317)
T ss_dssp HCTTCSSCCHHHHHHHHTTTC----SSSSSSBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTTGG
T ss_pred hhhhccccchhHHHHHHhhhc----cCCCCCCCHHHHHHHHHHHcCCcccC-CCCCEEEECcchh
Confidence 0000000000 00000 00023668999999999987654322 4568999998854
No 249
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=99.68 E-value=1.2e-15 Score=128.90 Aligned_cols=215 Identities=15% Similarity=0.092 Sum_probs=136.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh------c
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------L 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------~ 92 (303)
+.+|+++||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.+++.++++ .
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLA-GAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 357899999999999999999999 68999999999876532 123568899999999988887776 4
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.++|.|+.... ..+..+....+++|+.++.++++++... ..+..+++.+++...+.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~---------------- 173 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR---------------- 173 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----------------
Confidence 5668888765322 2244555568999999999999988654 11233555555432221
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+ ..+...|+.+|...+ +. .+ +++..++||.+..+....... ........... ..
T Consensus 174 --~---~~~~~~Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~--~~------ 237 (275)
T 4imr_A 174 --P---KSVVTAYAATKAAQHNLIQSQARDFAGDN-VLLNTLAPGLVDTDRNADRRA--QDPEGWDEYVR--TL------ 237 (275)
T ss_dssp --C---CTTBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSBCSHHHHHHHH--HCHHHHHHHHH--HH------
T ss_pred --C---CCCchhhHHHHHHHHHHHHHHHHHhcccC-cEEEEEEeccccCcccccccc--cChHHHHHHHh--hc------
Confidence 0 111122777766544 22 23 999999999998631110000 00000000110 00
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
..+..+.+++|+|.++++++...... ..|+.+++.+|
T Consensus 238 ------~p~~r~~~pedvA~~v~fL~s~~a~~-itG~~i~vdGG 274 (275)
T 4imr_A 238 ------NWMGRAGRPEEMVGAALFLASEACSF-MTGETIFLTGG 274 (275)
T ss_dssp ------STTCSCBCGGGGHHHHHHHHSGGGTT-CCSCEEEESSC
T ss_pred ------CccCCCcCHHHHHHHHHHHcCcccCC-CCCCEEEeCCC
Confidence 01122557788999999988654322 44689988876
No 250
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=99.68 E-value=1.7e-15 Score=128.97 Aligned_cols=211 Identities=13% Similarity=0.100 Sum_probs=135.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC-cccc--------ccCCCeEEEEecCCC----HHHHHHHHh-
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP-EITA--------IQSSSYCFISCDLLN----PLDIKRKLT- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~--------~~~~~~~~~~~D~~~----~~~l~~~~~- 91 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++ .... ....++.++.+|++| .++++++++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLH-QTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHH-HHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 457899999999999999999999 6899999999987 4321 112468889999999 888877776
Q ss_pred ------ccCceeEEeecccc---------c-----CChHHHHHHHHHHHHHHHHHHHHHhhccCC--------ccEEEEe
Q 042242 92 ------LLEDVTHIFWVTWA---------S-----QFASDMHKCCEQNKAMMCNALNAILPRAKA--------LKHVSLQ 143 (303)
Q Consensus 92 ------~~~~V~~~~~~~~~---------~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--------~~~~~~~ 143 (303)
.+|.++|.|+.... . ....+..+.+++|+.++..+++++...... ..+++.+
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 46778888765321 1 223344468899999999999988765211 2355555
Q ss_pred ecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccc
Q 042242 144 TGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYN 213 (303)
Q Consensus 144 s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~ 213 (303)
++...+.. ..+... |+.+|...+ +. .+ +++.+++|+.++++. ...
T Consensus 180 sS~~~~~~------------------~~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~t~~-~~~-- 234 (288)
T 2x9g_A 180 CDAMVDQP------------------CMAFSL---YNMGKHALVGLTQSAALELAPYG-IRVNGVAPGVSLLPV-AMG-- 234 (288)
T ss_dssp CCTTTTSC------------------CTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSCSCCT-TSC--
T ss_pred ecccccCC------------------CCCCch---HHHHHHHHHHHHHHHHHHhhccC-eEEEEEEeccccCcc-ccC--
Confidence 54322210 000222 787775443 11 24 999999999999854 211
Q ss_pred hhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccC-ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 214 FLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDG-SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
... ...+.. ..|+ + .+ .+++++|.++++++...... ..|+.+++.++..
T Consensus 235 --~~~--~~~~~~--~~p~---~----------r~~~~pedvA~~v~~l~s~~~~~-itG~~i~vdGG~~ 284 (288)
T 2x9g_A 235 --EEE--KDKWRR--KVPL---G----------RREASAEQIADAVIFLVSGSAQY-ITGSIIKVDGGLS 284 (288)
T ss_dssp --HHH--HHHHHH--TCTT---T----------SSCCCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred --hHH--HHHHHh--hCCC---C----------CCCCCHHHHHHHHHHHhCccccC-ccCCEEEECcchh
Confidence 110 011111 1121 1 13 57899999999988654321 4468888888754
No 251
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=99.68 E-value=3.3e-15 Score=123.30 Aligned_cols=206 Identities=13% Similarity=0.118 Sum_probs=132.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhc-------cCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTL-------LEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V 96 (303)
|+|+||||||++.||+++++.|+ +.|++|.+++|++.... .+..++..+++|++|.++++++++. +|.+
T Consensus 1 MnK~vlVTGas~GIG~aia~~la-~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL 79 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFL-EAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 67999999999999999999999 68999999999865532 2345788999999999988776653 4556
Q ss_pred eEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 97 THIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 97 ~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
+|.|+... .+.+.++..+.+++|+.++..+.+++... .++--.++.+++...+.+. +.
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~----------------~~- 142 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE----------------PD- 142 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC----------------TT-
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCC----------------CC-
Confidence 66654322 22344555668999999999888887665 1111344444432221100 00
Q ss_pred CCCccchHHHHHHHH---------HHhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 172 SKSNNFYYVLEDLLK---------EKLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 172 p~~~~~~y~~~k~~~---------e~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
..+ |..+|... |+.++ +++..+.||.|-.+.... +... ... ..|+.
T Consensus 143 -~~~---Y~asKaal~~ltk~lA~ela~~-IrVN~I~PG~i~t~~~~~---~~~~------~~~--~~Pl~--------- 197 (247)
T 3ged_A 143 -SEA---YASAKGGIVALTHALAMSLGPD-VLVNCIAPGWINVTEQQE---FTQE------DCA--AIPAG--------- 197 (247)
T ss_dssp -CHH---HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCCCC------CCHH------HHH--TSTTS---------
T ss_pred -CHH---HHHHHHHHHHHHHHHHHHHCCC-CEEEEEecCcCCCCCcHH---HHHH------HHh--cCCCC---------
Confidence 112 66655433 34444 999999999886532111 1011 001 22311
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
-+..++|+|.++++++.+.. ..|+.+.+.+|..
T Consensus 198 ----R~g~pediA~~v~fL~s~~~---iTG~~i~VDGG~s 230 (247)
T 3ged_A 198 ----KVGTPKDISNMVLFLCQQDF---ITGETIIVDGGMS 230 (247)
T ss_dssp ----SCBCHHHHHHHHHHHHHCSS---CCSCEEEESTTGG
T ss_pred ----CCcCHHHHHHHHHHHHhCCC---CCCCeEEECcCHH
Confidence 14577899999999986543 3458999988753
No 252
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=99.68 E-value=1.6e-15 Score=124.80 Aligned_cols=189 Identities=16% Similarity=0.092 Sum_probs=124.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhcc----CceeEEe
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTLL----EDVTHIF 100 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~----~~V~~~~ 100 (303)
|+||||||+|+||++++++|+ ..|++|++++|++.... ....++.++.+|++|.++++++++.+ |.++|.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYD-AEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred CEEEEecCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 689999999999999999999 68999999999876532 12356889999999999999999876 4588887
Q ss_pred ecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 101 WVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 101 ~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
+.... ..+..+..+.+++|+.++.++++++... ..+-.+++.+++...+... .+..+
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~------------------~~~~~ 142 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK------------------AQEST 142 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC------------------TTCHH
T ss_pred CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC------------------CCCch
Confidence 65332 2234555568999999999999998765 2212255555543332110 00223
Q ss_pred cchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcc
Q 042242 176 NFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCL 246 (303)
Q Consensus 176 ~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 246 (303)
|+.+|...+ ..... +++..++||.+..+... .. ... ....
T Consensus 143 ---Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------~~----------~~~-----------~~~~ 191 (230)
T 3guy_A 143 ---YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE-------TS----------GKS-----------LDTS 191 (230)
T ss_dssp ---HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------------------
T ss_pred ---hHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH-------hc----------CCC-----------CCcc
Confidence 777776554 11222 99999999988763111 00 000 0111
Q ss_pred cCccHHHHHHHHHHHhcCcCC
Q 042242 247 DGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 247 ~~~~~~d~a~a~~~~~~~~~~ 267 (303)
.+.+++|+|+++++++.++..
T Consensus 192 ~~~~~~dvA~~i~~l~~~~~~ 212 (230)
T 3guy_A 192 SFMSAEDAALMIHGALANIGN 212 (230)
T ss_dssp -CCCHHHHHHHHHHHCCEETT
T ss_pred cCCCHHHHHHHHHHHHhCcCC
Confidence 256889999999998876643
No 253
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=99.68 E-value=2.3e-15 Score=128.92 Aligned_cols=206 Identities=14% Similarity=-0.015 Sum_probs=127.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
.+|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.+++.++++ .
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFA-RRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 45899999999999999999999 68999999999876532 113468899999999999888776 4
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc---cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR---AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.|+.... ..+..+..+.+++|+.++.++++++... .....+++.+|+...+.+.
T Consensus 109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 175 (301)
T 3tjr_A 109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN------------- 175 (301)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-------------
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-------------
Confidence 5668888765432 2344555668999999999999998654 1112355555543232110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.....|+.+|...+ +. .+ +++.+++||.|..+..... ..... ........+....
T Consensus 176 --------~~~~~Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~~~~~~----~~~~~--~~~~~~~~~~~~~ 240 (301)
T 3tjr_A 176 --------AGLGTYGVAKYGVVGLAETLAREVKPNG-IGVSVLCPMVVETKLVSNS----ERIRG--ADYGMSATPEGAF 240 (301)
T ss_dssp --------TTBHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEECCSCCCSSHHHHH----HHHC----------------
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHhcccC-cEEEEEECCcccccccccc----ccccc--hhhccccChhhhc
Confidence 01122787776444 11 23 9999999999876311000 00000 0000001111111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
+.. .....+++++|+|++++.++..+
T Consensus 241 ~~~----~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 241 GPL----PTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp ------------CCCHHHHHHHHHHHHHHT
T ss_pred ccc----ccccCCCCHHHHHHHHHHHHhcC
Confidence 110 12234679999999999988765
No 254
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=99.68 E-value=3.2e-15 Score=125.76 Aligned_cols=212 Identities=16% Similarity=0.107 Sum_probs=131.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
++|++|||||+|+||++++++|+ +.|++|++++++..... ....++.++.+|++|.++++++++
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la-~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLA-SDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHH-HHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999 68999998866544321 113468889999999999888776
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
.+|.++|.|+.... .....+..+.+++|+.++.++++++.....+-.+++.+++...+...
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 169 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH--------------- 169 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC---------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC---------------
Confidence 45668888765322 22344455688999999999999887652222345555443222110
Q ss_pred CCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 168 CPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
+ .... |+.+|...+ + .... +++..++|+.+..+....... ... ...+.. ..|
T Consensus 170 -~--~~~~---Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~--~~~~~~--~~p------- 230 (267)
T 3u5t_A 170 -P--SYGI---YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS--DEV--RDRFAK--LAP------- 230 (267)
T ss_dssp -T--TCHH---HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------C--HHHHHT--SST-------
T ss_pred -C--CchH---HHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC--HHH--HHHHHh--cCC-------
Confidence 0 0122 777776554 1 1122 999999999998742111000 000 000100 111
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+..+.+++|+|.++++++...... ..|+.+++.+|
T Consensus 231 ------~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~vdGG 265 (267)
T 3u5t_A 231 ------LERLGTPQDIAGAVAFLAGPDGAW-VNGQVLRANGG 265 (267)
T ss_dssp ------TCSCBCHHHHHHHHHHHHSTTTTT-CCSEEEEESSS
T ss_pred ------CCCCcCHHHHHHHHHHHhCccccC-ccCCEEEeCCC
Confidence 223568899999999988654332 45689988876
No 255
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=99.67 E-value=1.2e-15 Score=128.83 Aligned_cols=191 Identities=13% Similarity=0.008 Sum_probs=127.3
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-------cCCCeEEEEecCCCHHHHHHHHh-----
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-------QSSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
..+++|+|+||||+|+||++++++|+ +.|++|++++|++..... ...++.++.+|++|.+++.++++
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFA-KLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999 689999999998654320 13468899999999998888776
Q ss_pred --ccCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 92 --LLEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 92 --~~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.+|.|+|+++..... ....+..+.+++|+.++.++++++... ..+..+++.+++...|...
T Consensus 106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 174 (272)
T 1yb1_A 106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV----------- 174 (272)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----------
T ss_pred CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------
Confidence 456788887654322 123344468899999988888877653 1233455555543333110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hhc--CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KLA--GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~~--~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.+...|+.+|...+ +.. .. ++++++||+.+.++.... .
T Consensus 175 ----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------~-------------- 224 (272)
T 1yb1_A 175 ----------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------P-------------- 224 (272)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------T--------------
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------c--------------
Confidence 01112777665443 110 22 999999999998742110 0
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
. ..+..+.+++|+|.+++.++..+.
T Consensus 225 ---------~-~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 225 ---------S-TSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp ---------H-HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred ---------c-ccccCCCCHHHHHHHHHHHHHcCC
Confidence 0 111235688999999999887653
No 256
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=99.67 E-value=1.9e-15 Score=126.82 Aligned_cols=218 Identities=12% Similarity=-0.002 Sum_probs=131.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----------ccCCCeEEEEecCCCHHHHHHHHh----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----------IQSSSYCFISCDLLNPLDIKRKLT---- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----------~~~~~~~~~~~D~~~~~~l~~~~~---- 91 (303)
+++|++|||||+|+||++++++|+ +.|++|++++|...... ....++.++.+|++|.++++++++
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFA-LESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHT-TSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999 78999999987643211 113467889999999999888876
Q ss_pred ---ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 ---LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ---~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++..+++++.....+-.+++.+++...+....
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------- 156 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG----------- 156 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC-----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC-----------
Confidence 35668888764322 223445556889999999999999887522233455554433331110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
. ... |+.+|...+ ..... +++..++||.|..+...... ... .......
T Consensus 157 -----~--~~~---Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~----------~~~~~~~ 213 (262)
T 3ksu_A 157 -----F--YST---YAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---TKE----------STAFHKS 213 (262)
T ss_dssp -----C--CCC--------CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------
T ss_pred -----C--Cch---hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---chH----------HHHHHHh
Confidence 0 112 444333222 22222 99999999988753110000 000 0000000
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHH
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWK 286 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~ 286 (303)
. .....+.+++|+|.++++++.. .. ...|+.+++.++......
T Consensus 214 ~------~~~~r~~~pedvA~~v~~L~s~-~~-~itG~~i~vdGg~~~~~~ 256 (262)
T 3ksu_A 214 Q------AMGNQLTKIEDIAPIIKFLTTD-GW-WINGQTIFANGGYTTREG 256 (262)
T ss_dssp --------CCCCSCCGGGTHHHHHHHHTT-TT-TCCSCEEEESTTCCCC--
T ss_pred c------CcccCCCCHHHHHHHHHHHcCC-CC-CccCCEEEECCCccCCCc
Confidence 0 1112356778899999998865 22 145689999888765443
No 257
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=99.66 E-value=1.3e-15 Score=127.94 Aligned_cols=157 Identities=12% Similarity=0.066 Sum_probs=108.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.... . ...++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLA-EEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 456899999999999999999999 68999999999865422 1 12367889999999998877776
Q ss_pred ccCceeEEeecc-c----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 LLEDVTHIFWVT-W----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ~~~~V~~~~~~~-~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.++.. . ...+..+..+.+++|+.++.++++++.... .+..+++.+++...+.+.
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 151 (262)
T 1zem_A 84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP------------ 151 (262)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC------------
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC------------
Confidence 456788887643 1 222344555689999999999999887641 123455555543232110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLG 205 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G 205 (303)
+ .... |+.+|...+ +. .+ +++++++|+.+..
T Consensus 152 ----~--~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~vn~v~PG~v~t 192 (262)
T 1zem_A 152 ----P--NMAA---YGTSKGAIIALTETAALDLAPYN-IRVNAISPGYMGP 192 (262)
T ss_dssp ----T--TBHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECSBCS
T ss_pred ----C--CCch---HHHHHHHHHHHHHHHHHHHHhhC-eEEEEEecCCcCc
Confidence 0 0112 777665433 22 23 9999999998865
No 258
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=99.66 E-value=3.2e-15 Score=123.35 Aligned_cols=190 Identities=12% Similarity=-0.001 Sum_probs=124.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++|+||||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++. +|.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLV-ERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 45899999999999999999999 68999999999875432 1122588999999999998887764 466
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
++|.|+.... ..+..+..+.+++|+.++..+++++.... .+-.+++.+++...+.+.
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~------------------ 142 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK------------------ 142 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC------------------
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC------------------
Confidence 8888775322 23455556689999999999999886541 111245554442222110
Q ss_pred CCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 171 VSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
.....|+.+|...+ ..... +++..++||.+..+..... . ..+ .
T Consensus 143 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-----~-----------~~~---~------ 194 (235)
T 3l6e_A 143 ---ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT-----D-----------HVD---P------ 194 (235)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------------
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc-----C-----------CCC---C------
Confidence 01122777776554 11122 9999999998876311100 0 000 0
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~ 267 (303)
..+.+++|+|+++++++..+..
T Consensus 195 ----~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 195 ----SGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp ------CBCHHHHHHHHHHHTCCCSS
T ss_pred ----cCCCCHHHHHHHHHHHHhCCCC
Confidence 0256889999999999876543
No 259
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=99.66 E-value=3.7e-15 Score=124.30 Aligned_cols=198 Identities=10% Similarity=-0.041 Sum_probs=119.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFA-AEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 356899999999999999999999 68999999999876532 1134688999999999999888874
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.++|.|+.... ..+..+..+.+++|+.++..+++++.... .+..+++.+++...+.+.
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 149 (252)
T 3h7a_A 84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG-------------- 149 (252)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC--------------
T ss_pred ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC--------------
Confidence 4668888765332 23445556689999999999988876541 112234444432222110
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcce-EEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAW-SVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~-~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
..... |+.+|...+ +. .+ +++ .+++||.+..+...... ... .. . ...
T Consensus 150 ----~~~~~---Y~asKaa~~~l~~~la~e~~~~g-i~v~n~v~PG~v~T~~~~~~~---~~~------~~----~-~~~ 207 (252)
T 3h7a_A 150 ----SGFAA---FASAKFGLRAVAQSMARELMPKN-IHVAHLIIDSGVDTAWVRERR---EQM------FG----K-DAL 207 (252)
T ss_dssp ----TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEEC-----------------------------------
T ss_pred ----CCCcc---HHHHHHHHHHHHHHHHHHhhhcC-CEEEEEecCCccCChhhhccc---hhh------hh----h-hhh
Confidence 00222 777765444 22 23 888 89999988763221110 000 00 0 000
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~ 267 (303)
. .... +.+++|+|.++++++..+..
T Consensus 208 ~------~~~~-~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 208 A------NPDL-LMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp -------------CCHHHHHHHHHHHHHCCGG
T ss_pred c------CCcc-CCCHHHHHHHHHHHHhCchh
Confidence 0 1111 66889999999999876644
No 260
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=99.66 E-value=7e-15 Score=127.32 Aligned_cols=211 Identities=13% Similarity=0.093 Sum_probs=135.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEe-cCCcccc-----c---cCCCeEEEEecCCCHH-------------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIA-RKPEITA-----I---QSSSYCFISCDLLNPL------------- 84 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~-----~---~~~~~~~~~~D~~~~~------------- 84 (303)
++|+||||||+|+||++++++|+ ..|++|++++ |++.... . ...++.++.+|++|.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La-~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 45899999999999999999999 6899999999 8754321 1 1246888999999988
Q ss_pred ----HHHHHHh-------ccCceeEEeecccc----cCC--------------hHHHHHHHHHHHHHHHHHHHHHhhc--
Q 042242 85 ----DIKRKLT-------LLEDVTHIFWVTWA----SQF--------------ASDMHKCCEQNKAMMCNALNAILPR-- 133 (303)
Q Consensus 85 ----~l~~~~~-------~~~~V~~~~~~~~~----~~~--------------~~~~~~~~~~n~~~~~~ll~~~~~~-- 133 (303)
+++++++ .+|.++|.|+.... ... ..+....+++|+.++..+++++...
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776 45678888765321 112 3444568899999999999988754
Q ss_pred cCC------ccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEE
Q 042242 134 AKA------LKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSV 197 (303)
Q Consensus 134 ~~~------~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~i 197 (303)
... ..+++.+++...+... .+..+ |+.+|...+ +. .+ +++++
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~~------------------~~~~~---Y~asKaal~~l~~~la~el~~~g-Irvn~ 261 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQPL------------------LGYTI---YTMAKGALEGLTRSAALELAPLQ-IRVNG 261 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSCC------------------TTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEE
T ss_pred hcCCcCCCCCcEEEEECchhhccCC------------------CCcHH---HHHHHHHHHHHHHHHHHHHhhcC-cEEEE
Confidence 111 3456665543222100 00122 777666544 11 23 99999
Q ss_pred ecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEe
Q 042242 198 HRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNA 277 (303)
Q Consensus 198 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni 277 (303)
++|+.|..+. . .. ... ...+.. ..|+ . ..+.+++|+|.++++++...... ..|+.+++
T Consensus 262 v~PG~v~T~~-~-~~---~~~--~~~~~~--~~p~--~----------~r~~~pedvA~~v~~l~s~~~~~-itG~~i~v 319 (328)
T 2qhx_A 262 VGPGLSVLVD-D-MP---PAV--WEGHRS--KVPL--Y----------QRDSSAAEVSDVVIFLCSSKAKY-ITGTCVKV 319 (328)
T ss_dssp EEESSBSCCC-C-SC---HHH--HHHHHT--TCTT--T----------TSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEE
T ss_pred EecCcccCCc-c-cc---HHH--HHHHHh--hCCC--C----------CCCCCHHHHHHHHHHHhCccccC-ccCcEEEE
Confidence 9999998854 1 11 111 011111 1121 0 02557899999999988643221 34688999
Q ss_pred ecCCC
Q 042242 278 INGPR 282 (303)
Q Consensus 278 ~~~~~ 282 (303)
.++..
T Consensus 320 dGG~~ 324 (328)
T 2qhx_A 320 DGGYS 324 (328)
T ss_dssp STTGG
T ss_pred CCCcc
Confidence 88754
No 261
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=99.65 E-value=5.2e-15 Score=124.15 Aligned_cols=197 Identities=13% Similarity=0.069 Sum_probs=123.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++ .
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELG-VAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999 68999999999865432 113467788999999998888776 4
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.++|.|+.... ..+..+....+++|+.++..+++++... ..+..+++.+++...+.+.
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-------------- 147 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-------------- 147 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC--------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC--------------
Confidence 5668888765322 2234555568999999999888887654 1122345555543232110
Q ss_pred CCCCCCCCccchHHHHHHHHH--------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE--------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e--------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
..... |+.+|...+ ...+ +++..++||.|..+...... ... ... . ..
T Consensus 148 ----~~~~~---Y~asKaal~~l~~~la~e~~g-Irvn~v~PG~v~T~~~~~~~---~~~----------~~~-~-~~-- 202 (264)
T 3tfo_A 148 ----PTAAV---YCATKFAVRAISDGLRQESTN-IRVTCVNPGVVESELAGTIT---HEE----------TMA-A-MD-- 202 (264)
T ss_dssp ----TTCHH---HHHHHHHHHHHHHHHHHHCSS-EEEEEEEECCC-----------------------------------
T ss_pred ----CCChh---HHHHHHHHHHHHHHHHHhCCC-CEEEEEecCCCcCccccccc---chh----------HHH-H-HH--
Confidence 00122 777766444 1124 99999999998774211100 000 000 0 00
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~ 267 (303)
.......+++|+|+++++++..+..
T Consensus 203 ----~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 203 ----TYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp ---------CCCHHHHHHHHHHHHHSCTT
T ss_pred ----hhhccCCCHHHHHHHHHHHhcCCcc
Confidence 0000135789999999999887754
No 262
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=99.64 E-value=3.1e-15 Score=126.86 Aligned_cols=219 Identities=14% Similarity=0.055 Sum_probs=134.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
+++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.+++.++++. +|
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFV-AEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 356899999999999999999999 68999999999865432 1234688999999999988877764 46
Q ss_pred ceeEEeecccccC---------ChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCc
Q 042242 95 DVTHIFWVTWASQ---------FASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 95 ~V~~~~~~~~~~~---------~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.++|.|+...... ........+++|+.++..+++++.... .+-.+++.+++...+..
T Consensus 82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------- 148 (281)
T 3zv4_A 82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP------------- 148 (281)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-------------
T ss_pred EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-------------
Confidence 6888876432111 112234578999999999999987641 11134444444222210
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCcc-chhhH----HHHHHHHhhhCCC
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLY-NFLGC----LCVYGAVCKHLNL 230 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~----~~~~~~~~~~~~~ 230 (303)
......|+.+|...+ +... +++..++||.+..+-..... ..... ......+.. ..
T Consensus 149 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 217 (281)
T 3zv4_A 149 --------NGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKS--VL 217 (281)
T ss_dssp --------SSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHH--TC
T ss_pred --------CCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHh--cC
Confidence 001122777766554 2234 99999999999874321110 00000 000000110 11
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.+..+.+++|+|.++++++..+......|+.+++.+|..
T Consensus 218 -------------p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 218 -------------PIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp -------------TTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred -------------CCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 122356778899999998874443324568999988754
No 263
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=99.64 E-value=1.4e-14 Score=122.95 Aligned_cols=204 Identities=10% Similarity=0.007 Sum_probs=132.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------------ccCCCeEEEEecCCCHHHHHHHHh
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------------IQSSSYCFISCDLLNPLDIKRKLT 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------------~~~~~~~~~~~D~~~~~~l~~~~~ 91 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|+..+.. ....++.++++|++|.++++++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVA-ADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 356899999999999999999999 68999999999876311 113468889999999999888776
Q ss_pred -------ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcc
Q 042242 92 -------LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 92 -------~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~ 158 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++..+++++.... .+..+++.+++...+...
T Consensus 86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------ 159 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK------ 159 (285)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG------
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC------
Confidence 45668888765432 23344555688999999999999988762 233456655543222110
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhC
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHL 228 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
..+... |+.+|...+ +. .+ +++..++|+.+.. + .+ ... ... .
T Consensus 160 -----------~~~~~~---Y~asKaal~~~~~~la~e~~~~g-I~vn~v~PG~~v~--t--~~--~~~------~~~-~ 211 (285)
T 3sc4_A 160 -----------WLRPTP---YMMAKYGMTLCALGIAEELRDAG-IASNTLWPRTTVA--T--AA--VQN------LLG-G 211 (285)
T ss_dssp -----------GSCSHH---HHHHHHHHHHHHHHHHHHTGGGT-CEEEEEECSSCBC--C--HH--HHH------HHT-S
T ss_pred -----------CCCCch---HHHHHHHHHHHHHHHHHHhcccC-cEEEEEeCCCccc--c--HH--HHh------hcc-c
Confidence 000122 777766544 11 23 9999999984332 1 10 001 000 0
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeec
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAIN 279 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~ 279 (303)
..+ +..+.+++|+|.++++++..+.. ..|+.+.+.+
T Consensus 212 ~~~-------------~~r~~~pedvA~~~~~l~s~~~~--~tG~~i~~dg 247 (285)
T 3sc4_A 212 DEA-------------MARSRKPEVYADAAYVVLNKPSS--YTGNTLLCED 247 (285)
T ss_dssp CCC-------------CTTCBCTHHHHHHHHHHHTSCTT--CCSCEEEHHH
T ss_pred ccc-------------ccCCCCHHHHHHHHHHHhCCccc--ccceEEEEcC
Confidence 111 11255788999999999877652 3457666554
No 264
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=99.63 E-value=4.7e-15 Score=125.03 Aligned_cols=209 Identities=15% Similarity=0.139 Sum_probs=128.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc-CCCeEEEEecCCCHHHHHHHHhcc-------C
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ-SSSYCFISCDLLNPLDIKRKLTLL-------E 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~-~~~~~~~~~D~~~~~~l~~~~~~~-------~ 94 (303)
.|++|||||+|+||++++++|+ +.|++|++++|++.+.. .. ..++.++.+|++|.++++++++.+ |
T Consensus 21 ~k~vlVTGas~gIG~aia~~La-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 21 SSTLFITGATSGFGEACARRFA-EAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp CCEEEESSTTTSSHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred CcEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3899999999999999999999 68999999999865432 11 136888999999999999998765 5
Q ss_pred ceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCcc-EEEEeecccccccccCCCcccccCCcCc
Q 042242 95 DVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALK-HVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 95 ~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~-~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
.++|.++... ...+..+..+.+++|+.++..+++++.... .+.. +++.+++...+...
T Consensus 100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~-------------- 165 (272)
T 2nwq_A 100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY-------------- 165 (272)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC--------------
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC--------------
Confidence 6888876432 122345555689999999888888776431 1123 55555543222100
Q ss_pred CCCCCCCCccchHHHHHHHHH-----Hhc---CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE-----KLA---GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e-----~~~---~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
.+... |+.+|...+ +.. .. +++++++|+.+.++...... .... ... .. ....
T Consensus 166 ----~~~~~---Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~---~~~~--~~~-----~~-~~~~- 226 (272)
T 2nwq_A 166 ----PGSHV---YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRF---GGDQ--ARY-----DK-TYAG- 226 (272)
T ss_dssp ----TTCHH---HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------------C-
T ss_pred ----CCCch---HHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccc---ccch--HHH-----HH-hhcc-
Confidence 00122 777776555 211 22 99999999999874211100 0000 000 00 0000
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
....+++|+|.++++++..+.. ..|+.+.+.++
T Consensus 227 --------~~~~~pedvA~~v~~l~s~~~~--~~g~~i~v~~~ 259 (272)
T 2nwq_A 227 --------AHPIQPEDIAETIFWIMNQPAH--LNINSLEIMPV 259 (272)
T ss_dssp --------CCCBCHHHHHHHHHHHHTSCTT--EEEEEEEEEET
T ss_pred --------CCCCCHHHHHHHHHHHhCCCcc--CccceEEEeec
Confidence 1135889999999999876543 22456666654
No 265
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=99.63 E-value=3.8e-14 Score=116.25 Aligned_cols=215 Identities=10% Similarity=0.042 Sum_probs=134.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhcc---CceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLL---EDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~---~~V~~~~~ 101 (303)
+.+|+++||||++.||+.+++.|+ +.|++|++++|+.+... ....++..+++|++|.++++++++.. |.++|.|+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la-~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG 87 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFA-ELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG 87 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 468999999999999999999999 68999999999876643 33457889999999999998888765 44666655
Q ss_pred ccc--ccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 102 VTW--ASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 102 ~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
... ...+..+..+.+++|+.++..+.+++..+. .+--.++.+++...+.+. +. ...
T Consensus 88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~----------------~~--~~~--- 146 (242)
T 4b79_A 88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGS----------------AD--RPA--- 146 (242)
T ss_dssp CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCC----------------SS--CHH---
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCC----------------CC--CHH---
Confidence 432 222344555689999999998888876651 111234444332111000 00 112
Q ss_pred HHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 179 YVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 179 y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
|..+|.... +....+++..+.|+.|..+-...... .......+.+ ..|+. .+-
T Consensus 147 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~---~~~~~~~~~~--~~Plg-------------R~g 208 (242)
T 4b79_A 147 YSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA---DVEATRRIMQ--RTPLA-------------RWG 208 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC---CHHHHHHHHH--TCTTC-------------SCB
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC---CHHHHHHHHh--cCCCC-------------CCc
Confidence 776555332 33222999999999997642211100 0011111111 22321 245
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.++|+|.++++++..... ...|+.+.+.+|.
T Consensus 209 ~peeiA~~v~fLaSd~a~-~iTG~~l~VDGG~ 239 (242)
T 4b79_A 209 EAPEVASAAAFLCGPGAS-FVTGAVLAVDGGY 239 (242)
T ss_dssp CHHHHHHHHHHHTSGGGT-TCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhc-CccCceEEECccH
Confidence 778999999988755432 2456888888774
No 266
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=99.63 E-value=1.1e-14 Score=122.49 Aligned_cols=216 Identities=10% Similarity=0.005 Sum_probs=137.3
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCcccc---------ccCCCeEEEEecCCCHHHHHHHHhcc-
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEITA---------IQSSSYCFISCDLLNPLDIKRKLTLL- 93 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~D~~~~~~l~~~~~~~- 93 (303)
.++|+|+||||+ |+||++++++|+ +.|++|++++|+..+.. ....++.++++|++|.++++++++.+
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCA-EMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHH-HTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHH-HCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 457899999999 899999999999 68999999998865431 11346888999999999988877654
Q ss_pred ------CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCccccc
Q 042242 94 ------EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 94 ------~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
|.++|.|+.... ..+..+..+.+++|+.++.++++++... ..+..+++.+++...+...
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 167 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN--------- 167 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------
Confidence 668888765432 2244555668999999999999988543 1122345554443222110
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH-----Hh--cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE-----KL--AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~--~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
. + .+..+ |+.+|...+ +. ... +++..+.|+.+..+..... ... ....+.. ..|
T Consensus 168 --~----~-~~~~~---Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~----~~~-~~~~~~~--~~~-- 228 (267)
T 3gdg_A 168 --F----P-QEQTS---YNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV----PKE-TQQLWHS--MIP-- 228 (267)
T ss_dssp --S----S-SCCHH---HHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS----CHH-HHHHHHT--TST--
T ss_pred --C----C-CCCCc---chHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC----CHH-HHHHHHh--cCC--
Confidence 0 0 00223 887776554 11 122 7899999999876321111 110 0001111 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|.++++++...... ..|+.+++.+|..
T Consensus 229 -----------~~r~~~~~dva~~~~~l~s~~~~~-itG~~i~vdgG~~ 265 (267)
T 3gdg_A 229 -----------MGRDGLAKELKGAYVYFASDASTY-TTGADLLIDGGYT 265 (267)
T ss_dssp -----------TSSCEETHHHHHHHHHHHSTTCTT-CCSCEEEESTTGG
T ss_pred -----------CCCCcCHHHHHhHhheeecCcccc-ccCCEEEECCcee
Confidence 122557889999999888654322 4568999988754
No 267
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=99.63 E-value=7.2e-15 Score=122.19 Aligned_cols=157 Identities=17% Similarity=0.140 Sum_probs=109.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.+.. . ...++.++.+|++|.++++++++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALA-AEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999 68999999999865432 0 12468889999999998887776
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.++.... ..+..+..+.+++|+.++.++++++.... .+ .+++.+++...+.+.
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------- 149 (247)
T 2jah_A 84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV------------- 149 (247)
T ss_dssp CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-------------
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-------------
Confidence 46668888765322 22344555689999999999999887641 12 456655543232110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeec
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~ 206 (303)
+ +... |+.+|...+ .. .+ +++++++|+.+.++
T Consensus 150 ---~--~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~ 191 (247)
T 2jah_A 150 ---R--NAAV---YQATKFGVNAFSETLRQEVTERG-VRVVVIEPGTTDTE 191 (247)
T ss_dssp ---T--TCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECSBSSS
T ss_pred ---C--CCcH---HHHHHHHHHHHHHHHHHHhcccC-cEEEEEECCCCCCc
Confidence 0 0122 777665433 22 24 99999999999874
No 268
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=99.62 E-value=4.1e-14 Score=119.46 Aligned_cols=200 Identities=14% Similarity=0.119 Sum_probs=127.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------------ccCCCeEEEEecCCCHHHHHHHHh
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------------IQSSSYCFISCDLLNPLDIKRKLT 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------------~~~~~~~~~~~D~~~~~~l~~~~~ 91 (303)
+++|+++||||+|.||++++++|+ +.|++|++++|+..+.. ....++.++.+|++|.++++++++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAA-RDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHH-HCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 457899999999999999999999 68999999999875421 013467889999999998888776
Q ss_pred -------ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcc
Q 042242 92 -------LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 92 -------~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~ 158 (303)
.+|.++|.|+.... ..+..+..+.+++|+.++..+++++... ..+-.+++.+++...+...
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------ 156 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA------ 156 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH------
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC------
Confidence 45668888765322 2334455568999999999999998764 1223455555543222110
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhC
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHL 228 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
+ ..+... |+.+|...+ +. .+ +++..++|+.+... ... . . ..
T Consensus 157 ----~------~~~~~~---Y~asKaal~~l~~~la~e~~~~g-I~vn~v~PG~~v~T--~~~-~---~------~~--- 207 (274)
T 3e03_A 157 ----W------WGAHTG---YTLAKMGMSLVTLGLAAEFGPQG-VAINALWPRTVIAT--DAI-N---M------LP--- 207 (274)
T ss_dssp ----H------HHHCHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEECSBCBCC----------------------
T ss_pred ----C------CCCCch---HHHHHHHHHHHHHHHHHHhhhcC-EEEEEEECCccccc--chh-h---h------cc---
Confidence 0 000122 777766544 22 23 99999999854431 100 0 0 00
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceE
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAF 275 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~y 275 (303)
..+ ...+.+++|+|.++++++...... ..|+.+
T Consensus 208 ~~~-------------~~~~~~pedvA~~v~~l~s~~~~~-itG~~i 240 (274)
T 3e03_A 208 GVD-------------AAACRRPEIMADAAHAVLTREAAG-FHGQFL 240 (274)
T ss_dssp CCC-------------GGGSBCTHHHHHHHHHHHTSCCTT-CCSCEE
T ss_pred ccc-------------ccccCCHHHHHHHHHHHhCccccc-cCCeEE
Confidence 111 111557889999999988654332 345666
No 269
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=99.62 E-value=6.3e-15 Score=124.87 Aligned_cols=199 Identities=11% Similarity=0.058 Sum_probs=125.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+.+|+||||||+|+||++++++|+ +.|++|++++|++..... ....+.++++|++|.++++++++.
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALS-AEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999 689999999998754321 012358899999999998887764
Q ss_pred --cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--C--CccEEEEeecccccccccCCCccccc
Q 042242 93 --LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRA--K--ALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 --~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~--~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
+|.++|.|+.... ..+..+..+.+++|+.++..+++++.... . .-.+++.+++...+.+
T Consensus 110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~---------- 179 (281)
T 4dry_A 110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP---------- 179 (281)
T ss_dssp SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC----------
Confidence 4668888765322 23445556689999999988888876651 1 1235555554322210
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
..+... |+.+|...+ .. .+ +++..++|+.|..+...... . .
T Consensus 180 --------~~~~~~---Y~asKaa~~~l~~~la~e~~~~g-I~vn~v~PG~v~T~~~~~~~----~-------------~ 230 (281)
T 4dry_A 180 --------RPNSAP---YTATKHAITGLTKSTALDGRMHD-IACGQIDIGNAATDMTARMS----T-------------G 230 (281)
T ss_dssp --------CTTCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEEECBCC-----------C-------------E
T ss_pred --------CCCChh---HHHHHHHHHHHHHHHHHHhcccC-eEEEEEEECcCcChhhhhhc----c-------------h
Confidence 001223 777766544 11 23 99999999988763211100 0 0
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCc
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDIS 268 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~ 268 (303)
..... .. .....+.+++|+|.++++++..+...
T Consensus 231 ~~~~~-~~---~~~~~~~~pedvA~~v~fL~s~~~~~ 263 (281)
T 4dry_A 231 VLQAN-GE---VAAEPTIPIEHIAEAVVYMASLPLSA 263 (281)
T ss_dssp EECTT-SC---EEECCCBCHHHHHHHHHHHHHSCTTE
T ss_pred hhhhh-hc---ccccCCCCHHHHHHHHHHHhCCCccC
Confidence 00000 00 11223568899999999999877543
No 270
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=99.62 E-value=2.6e-14 Score=121.78 Aligned_cols=213 Identities=12% Similarity=0.077 Sum_probs=135.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEe-cCCcccc-----c---cCCCeEEEEecCCCHH------------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIA-RKPEITA-----I---QSSSYCFISCDLLNPL------------ 84 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~-----~---~~~~~~~~~~D~~~~~------------ 84 (303)
+++|+++||||+|+||++++++|+ +.|++|++++ |++.... . ...++.++++|++|.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 85 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence 346899999999999999999999 6899999999 8754321 1 1246888999999998
Q ss_pred -----HHHHHHh-------ccCceeEEeecccc----cCC--------------hHHHHHHHHHHHHHHHHHHHHHhhc-
Q 042242 85 -----DIKRKLT-------LLEDVTHIFWVTWA----SQF--------------ASDMHKCCEQNKAMMCNALNAILPR- 133 (303)
Q Consensus 85 -----~l~~~~~-------~~~~V~~~~~~~~~----~~~--------------~~~~~~~~~~n~~~~~~ll~~~~~~- 133 (303)
++.++++ .+|.++|.|+.... ... .......+++|+.++..+++++...
T Consensus 86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 165 (291)
T 1e7w_A 86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 165 (291)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 8887776 45668888765321 112 3444568899999999999988754
Q ss_pred -cCC------ccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceE
Q 042242 134 -AKA------LKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWS 196 (303)
Q Consensus 134 -~~~------~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ 196 (303)
..+ ..+++.+++...+.. ......|+.+|...+ +. .+ +++.
T Consensus 166 ~~~~~~~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g-I~vn 223 (291)
T 1e7w_A 166 AGTPAKHRGTNYSIINMVDAMTNQP---------------------LLGYTIYTMAKGALEGLTRSAALELAPLQ-IRVN 223 (291)
T ss_dssp HTSCGGGSCSCEEEEEECCTTTTSC---------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT-EEEE
T ss_pred HhcCCCCCCCCcEEEEEechhhcCC---------------------CCCCchhHHHHHHHHHHHHHHHHHHHhcC-eEEE
Confidence 112 345666555323211 001122777766544 11 23 9999
Q ss_pred EecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEE
Q 042242 197 VHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFN 276 (303)
Q Consensus 197 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yn 276 (303)
.++|+.+..+. . .. ... ...+.. ..|+ .+ .+.+++|+|.++++++...... ..|+.++
T Consensus 224 ~v~PG~v~T~~-~--~~--~~~--~~~~~~--~~p~--~~----------r~~~pedvA~~v~~l~s~~~~~-itG~~i~ 281 (291)
T 1e7w_A 224 GVGPGLSVLVD-D--MP--PAV--WEGHRS--KVPL--YQ----------RDSSAAEVSDVVIFLCSSKAKY-ITGTCVK 281 (291)
T ss_dssp EEEESSBCCGG-G--SC--HHH--HHHHHT--TCTT--TT----------SCBCHHHHHHHHHHHHSGGGTT-CCSCEEE
T ss_pred EEeeCCccCCc-c--CC--HHH--HHHHHh--hCCC--CC----------CCCCHHHHHHHHHHHhCCcccC-ccCcEEE
Confidence 99999987642 1 10 111 011111 1111 00 2457899999999988654321 3468898
Q ss_pred eecCCCc
Q 042242 277 AINGPRF 283 (303)
Q Consensus 277 i~~~~~~ 283 (303)
+.++..+
T Consensus 282 vdGG~~~ 288 (291)
T 1e7w_A 282 VDGGYSL 288 (291)
T ss_dssp ESTTGGG
T ss_pred ECCCccc
Confidence 8887543
No 271
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=99.62 E-value=9.5e-15 Score=121.99 Aligned_cols=211 Identities=13% Similarity=0.017 Sum_probs=126.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc------cCCCeEEEEecCCCHHHHHH----HHhccCceeE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI------QSSSYCFISCDLLNPLDIKR----KLTLLEDVTH 98 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~l~~----~~~~~~~V~~ 98 (303)
|+|+||||+|+||++++++|+ +.|++|++++|++.+... ...++..+ |..+.+.+.+ .+..+|.++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLS-EAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHH-HTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred eEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence 689999999999999999999 689999999998654321 01233333 5555443222 2235677899
Q ss_pred Eeecc-c----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 99 IFWVT-W----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 99 ~~~~~-~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
.|+.. . ...+..+..+.+++|+.++.++++++... ..+..+++.+++...+... .
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------~ 140 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW------------------K 140 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC------------------T
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC------------------C
Confidence 87654 2 12234455568999999999999988654 1122355555543222110 0
Q ss_pred CCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHH----HH-HHHhhhCCCceeeCC
Q 042242 172 SKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLC----VY-GAVCKHLNLPFVFGG 236 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~g 236 (303)
+... |+.+|...+ +. .+ +++++++|+.++|+....... ..+. .. ..+.. .
T Consensus 141 ~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~~~~~~~~~~--T~~~~~~~~~~~~~~~--~------- 205 (254)
T 1zmt_A 141 ELST---YTSARAGACTLANALSKELGEYN-IPVFAIGPNYLHSEDSPYFYP--TEPWKTNPEHVAHVKK--V------- 205 (254)
T ss_dssp TCHH---HHHHHHHHHHHHHHHHHHHGGGT-CCEEEEEESSBCCBTCCSSCB--HHHHTTCHHHHHHHHH--H-------
T ss_pred CchH---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEecCccccccccccCC--CcccccChHHHHHHhc--c-------
Confidence 0122 777766544 11 23 999999999998864332211 1110 00 00000 0
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..+..+.+++|+|.++++++..+... ..|+.+++.++..
T Consensus 206 ------~p~~~~~~p~dvA~~v~~l~s~~~~~-~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 206 ------TALQRLGTQKELGELVAFLASGSCDY-LTGQVFWLAGGFP 244 (254)
T ss_dssp ------SSSSSCBCHHHHHHHHHHHHTTSCGG-GTTCEEEESTTCC
T ss_pred ------CCCCCCcCHHHHHHHHHHHhCcccCC-ccCCEEEECCCch
Confidence 11112568899999999988654322 3468999988754
No 272
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=4e-15 Score=123.97 Aligned_cols=191 Identities=12% Similarity=0.033 Sum_probs=124.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----------cCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----------QSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
.++|++|||||+|+||++++++|+ +.|++|++++|+..+... ...++.++.+|++|.+++.++++.
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLA-TDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHH-HHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999 679999999998754320 115688999999999988887764
Q ss_pred ----cCceeEEeecccc---cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 ----LEDVTHIFWVTWA---SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 ----~~~V~~~~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|.|+.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+.+
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 151 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG------------ 151 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC------------
Confidence 4668888765322 2233445568999999999999988653 112234444443222200
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
..+... |+.+|...+ +. .+ +++..++||.+..+. . .. ....
T Consensus 152 ------~~~~~~---Y~asKaa~~~l~~~la~e~~~~g-i~vn~v~PG~v~T~~---~----~~----------~~~~-- 202 (250)
T 3nyw_A 152 ------FADGGI---YGSTKFALLGLAESLYRELAPLG-IRVTTLCPGWVNTDM---A----KK----------AGTP-- 202 (250)
T ss_dssp -------CCTTH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSBCSHH---H----HH----------TTCC--
T ss_pred ------CCCCcc---hHHHHHHHHHHHHHHHHHhhhcC-cEEEEEecCcccCch---h----hh----------cCCC--
Confidence 001223 777766443 22 23 999999999886521 0 00 0111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~ 267 (303)
.....+.+++|+|.++++++..+..
T Consensus 203 ---------~~~~~~~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 203 ---------FKDEEMIQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp ---------SCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred ---------cccccCCCHHHHHHHHHHHHcCCCc
Confidence 0111256889999999999886654
No 273
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1.1e-14 Score=123.61 Aligned_cols=213 Identities=16% Similarity=0.103 Sum_probs=134.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC---eEEEEecCCccccc---------cCCCeEEEEecCCCHHHHHHHHhc--
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW---KVYGIARKPEITAI---------QSSSYCFISCDLLNPLDIKRKLTL-- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~l~~~~~~-- 92 (303)
.+|+||||||+|+||++++++|+ +.|+ +|++++|+...... ...++.++.+|++|.++++++++.
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~-~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYL-EASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-HHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCCChHHHHHHHHHH-HcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 56899999999999999999998 5666 99999998654320 134678899999999999998875
Q ss_pred -----cCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccc
Q 042242 93 -----LEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 93 -----~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
+|.++|.|+... ...+..+..+.+++|+.++.++++++... ..+..+++.+++...+.+.
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-------- 182 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY-------- 182 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--------
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC--------
Confidence 455888876432 12244555668999999999999998543 1122345554443222110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
....+ |+.+|...+ + .... +++..++||.|..+....... ..........
T Consensus 183 ----------~~~~~---Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~--~~~~~~~~~~------ 241 (287)
T 3rku_A 183 ----------PTGSI---YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYR--GNEEQAKNVY------ 241 (287)
T ss_dssp ----------TTCHH---HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTT--TCHHHHHHHH------
T ss_pred ----------CCCch---HHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccccccc--CcHHHHHHhh------
Confidence 00223 777766554 1 1122 999999999998731000000 0000000000
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
......+++|+|.++++++..+... ..|+++++.+++.
T Consensus 242 ------------~~~~p~~pedvA~~v~~l~s~~~~~-i~g~~i~v~~g~~ 279 (287)
T 3rku_A 242 ------------KDTTPLMADDVADLIVYATSRKQNT-VIADTLIFPTNQA 279 (287)
T ss_dssp ------------TTSCCEEHHHHHHHHHHHHTSCTTE-EEEEEEEEETTEE
T ss_pred ------------cccCCCCHHHHHHHHHHHhCCCCCe-EecceEEeeCCCC
Confidence 0011237899999999998766532 3357888887764
No 274
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=99.60 E-value=3.7e-15 Score=123.81 Aligned_cols=200 Identities=19% Similarity=0.170 Sum_probs=115.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHH---HHHHh---ccCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDI---KRKLT---LLEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l---~~~~~---~~~~V~~ 98 (303)
++|+||||||+|+||++++++|+ + |+.|++++|++.... ....++.++.+|+.+.+.. .+.++ .+|.++|
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~-~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~ 81 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLS-R-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH 81 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHT-T-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHh-C-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence 46899999999999999999998 5 889999999875532 2245788999999887542 12222 4566888
Q ss_pred EeecccccC----ChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 99 IFWVTWASQ----FASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 99 ~~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
.++...... +..+....+++|+.++..+++++.... ..-.+++.+++...+... .+.
T Consensus 82 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------------~~~ 143 (245)
T 3e9n_A 82 AAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPH------------------PGN 143 (245)
T ss_dssp CC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------------------------C
T ss_pred CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCC------------------CCc
Confidence 876543221 233445688999999888888876531 101344444443232111 002
Q ss_pred CccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhh
Q 042242 174 SNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 174 ~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (303)
.+ |+.+|...+ +. .+ +++.+++||.+.++...... ... .. ..+
T Consensus 144 ~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~---~~~----------~~--~~~-------- 196 (245)
T 3e9n_A 144 TI---YAASKHALRGLADAFRKEEANNG-IRVSTVSPGPTNTPMLQGLM---DSQ----------GT--NFR-------- 196 (245)
T ss_dssp HH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEEECCC-------------------------------C--------
T ss_pred hH---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEecCCccCchhhhhh---hhh----------hc--ccc--------
Confidence 23 777776554 11 23 99999999999884221110 000 00 001
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEee
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAI 278 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~ 278 (303)
...+.+++|+|+++++++..+.. +.+||+.
T Consensus 197 -~~~~~~p~dvA~~i~~l~~~~~~----~~~~~i~ 226 (245)
T 3e9n_A 197 -PEIYIEPKEIANAIRFVIDAGET----TQITNVD 226 (245)
T ss_dssp -CGGGSCHHHHHHHHHHHHTSCTT----EEEEEEE
T ss_pred -cccCCCHHHHHHHHHHHHcCCCc----cceeeeE
Confidence 11256889999999999887643 3678875
No 275
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=99.59 E-value=1.5e-14 Score=120.38 Aligned_cols=208 Identities=16% Similarity=0.156 Sum_probs=128.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCcee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LEDVT 97 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~ 97 (303)
|+++||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|++|.++++++++. +|.++
T Consensus 1 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 79 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFI-QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV 79 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 589999999999999999999 68999999999865432 1124688999999999999998874 46688
Q ss_pred EEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 98 HIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 98 ~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
|.++... ...+..+....+++|+.++..+++++... .....+++.+|+...+...
T Consensus 80 nnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------------ 141 (248)
T 3asu_A 80 NNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY------------------ 141 (248)
T ss_dssp ECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------------
T ss_pred ECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC------------------
Confidence 8876431 22334555568999999999998888643 1122455555543222100
Q ss_pred CCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceee-cCCCCccchhhHHHHHHHHhhhCCCceeeCCchhh
Q 042242 171 VSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLG-SSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREI 240 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (303)
.+... |+.+|...+ . .... +++.+++|+.|.| +..... . ... .... . . ...
T Consensus 142 ~~~~~---Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~-~~~---~~~~---~-~-~~~----- 202 (248)
T 3asu_A 142 AGGNV---YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--F-KGD---DGKA---E-K-TYQ----- 202 (248)
T ss_dssp TTCHH---HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------------------
T ss_pred CCCch---HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc--c-cCc---hHHH---H-H-HHh-----
Confidence 00222 777766554 1 1122 9999999999984 211100 0 000 0000 0 0 000
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
.....+++|+|.++++++..+.. ..+..+.+...
T Consensus 203 ----~~~~~~p~dvA~~v~~l~s~~~~--~~g~~i~v~~~ 236 (248)
T 3asu_A 203 ----NTVALTPEDVSEAVWWVSTLPAH--VNINTLEMMPV 236 (248)
T ss_dssp ------CCBCHHHHHHHHHHHHHSCTT--CCCCEEEECCT
T ss_pred ----ccCCCCHHHHHHHHHHHhcCCcc--ceeeEEEEccc
Confidence 01135889999999998876543 23456665543
No 276
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=99.59 E-value=2e-13 Score=113.11 Aligned_cols=219 Identities=10% Similarity=0.010 Sum_probs=134.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
++++|+++||||++.||+.+++.|+ +.|++|++++|++.... ....++..+++|++|+++++++++.
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la-~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFA-LNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3568999999999999999999999 68999999999875532 1234678899999999988777654
Q ss_pred --cCceeEEeecc-----cccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 --LEDVTHIFWVT-----WASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 --~~~V~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|.|+.. +.+.+.++..+.+++|+.++..+.+++... ..+--+++.+++...+.+.
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~----------- 151 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG----------- 151 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS-----------
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC-----------
Confidence 45566666532 123344556669999999999888887765 1122344444432221000
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+ ...+ |..+|.... +....+++..+.||.|-.+........ .... .....+. ..|.
T Consensus 152 -----~--~~~~---Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-~~~~-~~~~~~~-~~~~-- 216 (254)
T 4fn4_A 152 -----F--AGAP---YTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKP-SELG-MRTLTKL-MSLS-- 216 (254)
T ss_dssp -----S--SCHH---HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSC-CHHH-HHHHHHH-HTTC--
T ss_pred -----C--CChH---HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCC-cHHH-HHHHHhc-CCCC--
Confidence 0 0122 666554332 222229999999999976422111100 0100 0011100 0110
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+ .+-.++|+|.++++++...... ..|+.+.+.+|..
T Consensus 217 -~----------R~g~pediA~~v~fLaSd~a~~-iTG~~i~VDGG~t 252 (254)
T 4fn4_A 217 -S----------RLAEPEDIANVIVFLASDEASF-VNGDAVVVDGGLT 252 (254)
T ss_dssp -C----------CCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTGG
T ss_pred -C----------CCcCHHHHHHHHHHHhCchhcC-CcCCEEEeCCCcc
Confidence 1 1457789999999987554332 4568898888743
No 277
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=99.59 E-value=2e-14 Score=121.67 Aligned_cols=201 Identities=17% Similarity=0.110 Sum_probs=123.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-----c----CCCeEEEEecCCCHHHHHHHHh-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-----Q----SSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~----~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
+.+|+||||||+|+||++++++|+ +.|++|++++|++.+... . ...+.++.+|++|.+++.++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALV-QQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999 689999999998654220 0 1347788999999999888776
Q ss_pred --ccCceeEEeecccc----cCChHHHHHHHHHHHHH----HHHHHHHHhhccCCccEEEEeecccccccccCCCccccc
Q 042242 92 --LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAM----MCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 92 --~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~----~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
.+|.|+|+++.... .....+..+.+++|+.+ ++.++..+++....-.+++.+++...+..
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------- 178 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------- 178 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC----------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc----------
Confidence 56778888765322 22344555689999999 55555555543211135555554323210
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH---------Hhc-CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCC
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE---------KLA-GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNL 230 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
.+ ..+...|+.+|...+ +.. .. +++++++|+.|.++... ........ ....
T Consensus 179 ------~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~---~~~~~~~~--~~~~---- 240 (279)
T 1xg5_A 179 ------LP---LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF---KLHDKDPE--KAAA---- 240 (279)
T ss_dssp ------CS---CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH---HHTTTCHH--HHHH----
T ss_pred ------CC---CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh---hhcccChh--HHhh----
Confidence 00 111122777666543 110 23 99999999998873110 00000000 0000
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcC
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
. .....+.+++|+|+++++++..+.
T Consensus 241 ----------~-~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 241 ----------T-YEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp ----------H-HC---CBCHHHHHHHHHHHHHSCT
T ss_pred ----------h-cccccCCCHHHHHHHHHHHhcCCc
Confidence 0 111125688999999999987664
No 278
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=99.59 E-value=1.2e-13 Score=120.28 Aligned_cols=205 Identities=10% Similarity=0.001 Sum_probs=129.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------------ccCCCeEEEEecCCCHHHHHHHH
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------------IQSSSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------------~~~~~~~~~~~D~~~~~~l~~~~ 90 (303)
.+.+|+||||||+|.||++++++|+ +.|++|++++|+..+.. ....++.++.+|++|.+++++++
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La-~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAA-KDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHH-HCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 3456899999999999999999999 68999999999876421 01236788999999999988887
Q ss_pred h-------ccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCc
Q 042242 91 T-------LLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPE 157 (303)
Q Consensus 91 ~-------~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g 157 (303)
+ .+|.++|.|+... ...+..+..+.+++|+.++..+++++... ..+..+++.+++...+...
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~----- 195 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV----- 195 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC-----
Confidence 6 4566888876532 22234455568999999999999998665 1223455555543222110
Q ss_pred ccccCCcCcCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhC
Q 042242 158 EKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHL 228 (303)
Q Consensus 158 ~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
+ ......|+.+|...+ +..+ +++..+.|+.++. +. . ... +
T Consensus 196 -----------~---~~~~~~Y~aSKaal~~l~~~la~e~~~g-Irvn~v~PG~~i~--T~-~---~~~------~---- 244 (346)
T 3kvo_A 196 -----------W---FKQHCAYTIAKYGMSMYVLGMAEEFKGE-IAVNALWPKTAIH--TA-A---MDM------L---- 244 (346)
T ss_dssp -----------G---TSSSHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECSBCBC--CH-H---HHH------H----
T ss_pred -----------C---CCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEEeCCCccc--cH-H---HHh------h----
Confidence 0 001122777766543 1223 9999999986443 11 0 000 0
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
... .....+.+++|+|.++++++..... ..|+.+ +.++
T Consensus 245 ~~~-----------~~~~r~~~pedvA~~v~~L~s~~~~--itG~~i-vdgg 282 (346)
T 3kvo_A 245 GGP-----------GIESQCRKVDIIADAAYSIFQKPKS--FTGNFV-IDEN 282 (346)
T ss_dssp CC-------------CGGGCBCTHHHHHHHHHHHTSCTT--CCSCEE-EHHH
T ss_pred ccc-----------cccccCCCHHHHHHHHHHHHhcCCC--CCceEE-ECCc
Confidence 000 0111255788999999998876222 334655 5443
No 279
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=99.59 E-value=6.7e-14 Score=116.26 Aligned_cols=159 Identities=15% Similarity=0.114 Sum_probs=107.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecC--CCHHHHHHHHh---
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDL--LNPLDIKRKLT--- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~--~~~~~l~~~~~--- 91 (303)
.+.+|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....+..++.+|+ .+.+++.++++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYA-AHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 4567899999999999999999999 68999999999865432 1124567777777 88888777665
Q ss_pred ----ccCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccc
Q 042242 92 ----LLEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 92 ----~~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
.+|.++|.++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+.+.
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 161 (247)
T 3i1j_A 90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR-------- 161 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC--------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC--------
Confidence 45668888765321 2244555668999999999999998654 1223455555543222110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH--------HhcC-C-cceEEecCCceee
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAG-K-VAWSVHRPGLLLG 205 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~-~-~~~~ilRp~~v~G 205 (303)
.+... |+.+|...+ .... . +++..++||.+..
T Consensus 162 ----------~~~~~---Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t 203 (247)
T 3i1j_A 162 ----------ANWGA---YGVSKFATEGLMQTLADELEGVTAVRANSINPGATRT 203 (247)
T ss_dssp ----------TTCHH---HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSS
T ss_pred ----------CCcch---hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Confidence 00122 777666544 1112 3 8999999988765
No 280
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=99.59 E-value=9.8e-15 Score=124.08 Aligned_cols=192 Identities=15% Similarity=0.055 Sum_probs=123.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEEEecCCCHHHHHHHHh-----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
.+++++|+||||+|+||++++++|+ +.|++|++++|++.+... ...++.++.+|++|.+++.++++
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLA-KMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3457899999999999999999999 689999999998654321 11257889999999998887776
Q ss_pred --ccCceeEE-eecccc---cCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 --LLEDVTHI-FWVTWA---SQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 --~~~~V~~~-~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|. ++.... ..+..+..+.+++|+.++.++++++.... ..-.+++.+|+...+...
T Consensus 104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 171 (286)
T 1xu9_A 104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY------------ 171 (286)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC------------
T ss_pred cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC------------
Confidence 46668887 343221 22344555689999999999998876541 111244444442222110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.+... |+.+|...+ +. ... +++++++||.+..+. . ... .
T Consensus 172 ------~~~~~---Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~---~----~~~-----~--------- 221 (286)
T 1xu9_A 172 ------PMVAA---YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---A----MKA-----V--------- 221 (286)
T ss_dssp ------TTCHH---HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---H----HHH-----S---------
T ss_pred ------CCccH---HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh---H----HHh-----c---------
Confidence 00223 777666543 21 223 899999998886521 0 000 0
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
.+ .......+++++|+.++.++..+.
T Consensus 222 -~~------~~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 222 -SG------IVHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp -CG------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred -cc------cccCCCCCHHHHHHHHHHHHhcCC
Confidence 00 011125688999999998886653
No 281
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=99.58 E-value=1.3e-13 Score=115.34 Aligned_cols=218 Identities=16% Similarity=0.131 Sum_probs=133.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhcc-------C
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTLL-------E 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~-------~ 94 (303)
+.+|++|||||++.||+.+++.|+ +.|++|++++|+.+... ....+...+++|++|.++++++++.+ |
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFV-AEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 457899999999999999999999 78999999999876532 12356788999999999888777643 4
Q ss_pred ceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 95 DVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 95 ~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
.+++.|+... .+.+.++..+.+++|+.++..+++++...-.+-..++.+++...+.+. +.
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~----------------~~ 169 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT----------------PA 169 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC----------------TT
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC----------------CC
Confidence 4555554322 233455666799999999999999988763222334444432121000 00
Q ss_pred CCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccc--hhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 171 VSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYN--FLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
..+ |..+|.... ..... +++..+.||.|..+....... ....-.....+.. ..|+
T Consensus 170 --~~~---Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~~Pl------- 235 (273)
T 4fgs_A 170 --FSV---YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAA--QVPM------- 235 (273)
T ss_dssp --CHH---HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHH--HSTT-------
T ss_pred --chH---HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHh--cCCC-------
Confidence 122 777655433 11222 999999999987642211100 0000001111111 1221
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
--+-.++|+|.++++++...... ..|+.+.+.+|.
T Consensus 236 ------gR~g~peeiA~~v~FLaSd~a~~-iTG~~i~VDGG~ 270 (273)
T 4fgs_A 236 ------GRVGRAEEVAAAALFLASDDSSF-VTGAELFVDGGS 270 (273)
T ss_dssp ------SSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTT
T ss_pred ------CCCcCHHHHHHHHHHHhCchhcC-ccCCeEeECcCh
Confidence 12457789999999988554332 456888888774
No 282
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=99.57 E-value=1.7e-13 Score=114.08 Aligned_cols=220 Identities=11% Similarity=0.074 Sum_probs=134.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
..+|+++||||++.||+++++.|+ +.|++|++++|+.+... ....++..+.+|++|.++++++++.
T Consensus 5 L~gKvalVTGas~GIG~aia~~la-~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLA-EERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 467999999999999999999999 68999999999876532 1245788999999999887776654
Q ss_pred cCceeEEeeccc---ccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 93 LEDVTHIFWVTW---ASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 93 ~~~V~~~~~~~~---~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
+|.++|.|+... .+.+.++..+.+++|+.++..+.+++..+. .+--.++.+++...+.+.
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~---------------- 147 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ---------------- 147 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC----------------
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC----------------
Confidence 455666665422 233445556689999999998888876551 111234444432222110
Q ss_pred CCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchh-hHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFL-GCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
+. ..+ |..+|.... +.+..+++..+.||.|..+......... ........+.. ..|+ |
T Consensus 148 ~~--~~~---Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~pl---g-- 215 (258)
T 4gkb_A 148 GN--TSG---YCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAA--KVPL---G-- 215 (258)
T ss_dssp SS--CHH---HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHT--TCTT---T--
T ss_pred CC--chH---HHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHh--cCCC---C--
Confidence 00 122 666555333 2222299999999999864322111000 00000011111 1121 0
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..+..++|+|.++++++...... ..|+.+.+.+|.+
T Consensus 216 -------~R~g~peeiA~~v~fLaS~~a~~-iTG~~i~VDGG~T 251 (258)
T 4gkb_A 216 -------RRFTTPDEIADTAVFLLSPRASH-TTGEWLFVDGGYT 251 (258)
T ss_dssp -------TSCBCHHHHHHHHHHHHSGGGTT-CCSCEEEESTTTT
T ss_pred -------CCCcCHHHHHHHHHHHhCchhcC-ccCCeEEECCCcc
Confidence 02457789999999887554332 4568999988865
No 283
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=99.56 E-value=1e-13 Score=124.91 Aligned_cols=213 Identities=13% Similarity=0.075 Sum_probs=134.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc--------cC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL--------LE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~--------~~ 94 (303)
.+++++||||+|.||.+++++|. +.|++|++++|+..... ....+++++.+|++|.++++++++. +|
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La-~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id 290 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFA-RDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD 290 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred CCCEEEEeCCchHHHHHHHHHHH-HCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence 57899999999999999999999 67999999998753321 1123567899999999988877752 66
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.|+|.++.... ..+..+....+++|+.++.++.+++... .....+++.+|+...+.+..
T Consensus 291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~--------------- 355 (454)
T 3u0b_A 291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR--------------- 355 (454)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT---------------
T ss_pred EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC---------------
Confidence 68888765432 2344555568999999999999998865 12344566665533321110
Q ss_pred CCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 169 PRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
.... |+.+|...+ ..... +++.++.|+.+..+..... ... . ....+. .
T Consensus 356 ---g~~~---YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~-~-~~~~~~-~---------- 412 (454)
T 3u0b_A 356 ---GQTN---YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI----PLA-T-REVGRR-L---------- 412 (454)
T ss_dssp ---TCHH---HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------------CHHHHH-S----------
T ss_pred ---CCHH---HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc----chh-h-HHHHHh-h----------
Confidence 0122 777766332 11122 9999999999987422110 000 0 000000 0
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..+....+.+|+|.++++++...... ..|+.+++.++..
T Consensus 413 ---~~l~r~g~pedvA~~v~fL~s~~a~~-itG~~i~vdGG~~ 451 (454)
T 3u0b_A 413 ---NSLFQGGQPVDVAELIAYFASPASNA-VTGNTIRVCGQAM 451 (454)
T ss_dssp ---BTTSSCBCHHHHHHHHHHHHCGGGTT-CCSCEEEESSSBS
T ss_pred ---ccccCCCCHHHHHHHHHHHhCCccCC-CCCcEEEECCccc
Confidence 11122457789999999887644322 4568998887643
No 284
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=99.54 E-value=7.7e-13 Score=110.37 Aligned_cols=216 Identities=14% Similarity=0.065 Sum_probs=131.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc-------cCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL-------LEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~~ 98 (303)
..+|++|||||++.||+++++.|+ +.|++|++++|+..+.. .....+++|+++.++++++++. +|.++|
T Consensus 9 L~GK~alVTGas~GIG~aia~~la-~~Ga~V~~~~r~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVn 84 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFL-ELGAQVLTTARARPEGL---PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVH 84 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHH-HTTCEEEEEESSCCTTS---CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred CCCCEEEEeccCcHHHHHHHHHHH-HcCCEEEEEECCchhCC---CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 357999999999999999999999 68999999999765422 2345788999999988776653 455666
Q ss_pred Eeeccc------ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 99 IFWVTW------ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 99 ~~~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
.++... .+.+.++..+.+++|+.++..+.+++... ..+--+++.+++...+.. .
T Consensus 85 nAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~------------~------ 146 (261)
T 4h15_A 85 MLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP------------L------ 146 (261)
T ss_dssp CCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------C------
T ss_pred CCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC------------C------
Confidence 655321 22344555668999999999888887764 122234444443211100 0
Q ss_pred CCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHH--------HHHH-Hhh-hCCC
Q 042242 171 VSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLC--------VYGA-VCK-HLNL 230 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~--------~~~~-~~~-~~~~ 230 (303)
.....+|+.+|.... +. .+ +++..+.||.|-.+.... ...... .... ... ....
T Consensus 147 --~~~~~~Y~asKaal~~lt~~lA~Ela~~g-IrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (261)
T 4h15_A 147 --PESTTAYAAAKAALSTYSKAMSKEVSPKG-VRVVRVSPGWIETEASVR---LAERLAKQAGTDLEGGKKIIMDGLGGI 220 (261)
T ss_dssp --TTTCHHHHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCCHHHHH---HHHHHHHHTTCCHHHHHHHHHHHTTCC
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHhhhhC-eEEEEEeCCCcCCcchhh---hhHHHHHhhccchhhHHHHHHHHhcCC
Confidence 001123666555333 22 23 999999999887531100 000000 0000 000 0011
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
| +-.+..++|+|.++++++..... ...|+.+.+.+|-..
T Consensus 221 P-------------lgR~g~peevA~~v~fLaS~~a~-~itG~~i~VDGG~v~ 259 (261)
T 4h15_A 221 P-------------LGRPAKPEEVANLIAFLASDRAA-SITGAEYTIDGGTVP 259 (261)
T ss_dssp T-------------TSSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTTCSC
T ss_pred C-------------CCCCcCHHHHHHHHHHHhCchhc-CccCcEEEECCcCcc
Confidence 2 12255788999999998754432 245689988887543
No 285
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=99.54 E-value=1.8e-13 Score=113.42 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=132.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhcc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTLL----- 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~~----- 93 (303)
..+|+++||||++.||+.+++.|+ +.|++|++.+|++.... ....++..+++|++|+++++++++.+
T Consensus 7 L~gKvalVTGas~GIG~aia~~la-~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLA-AAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 467999999999999999999999 68999999999865432 12346788899999999887777543
Q ss_pred --CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccCCc
Q 042242 94 --EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 94 --~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
|.++|.|+... .+.+.++..+.+++|+.++..+.+++...- .+--+++.+++...+.+.
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~------------ 153 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR------------ 153 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC------------
Confidence 44666655432 223455666799999999999888766541 122344444432221110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+. ..+ |..+|.... +....+++..+.||.|..+.... ....-.....+.. ..|+.
T Consensus 154 ----~~--~~~---Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~--~~Pl~-- 217 (255)
T 4g81_D 154 ----PT--VAP---YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTA---LIEDKQFDSWVKS--STPSQ-- 217 (255)
T ss_dssp ----TT--CHH---HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHH---HHTCHHHHHHHHH--HSTTC--
T ss_pred ----CC--chh---HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhc---ccCCHHHHHHHHh--CCCCC--
Confidence 00 122 666554332 22222999999999987632110 0000000011111 12211
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.+..++|+|.++++++..... ...|+.+.+.+|.
T Consensus 218 -----------R~g~pediA~~v~fL~S~~a~-~iTG~~i~VDGG~ 251 (255)
T 4g81_D 218 -----------RWGRPEELIGTAIFLSSKASD-YINGQIIYVDGGW 251 (255)
T ss_dssp -----------SCBCGGGGHHHHHHHHSGGGT-TCCSCEEEESTTG
T ss_pred -----------CCcCHHHHHHHHHHHhCchhC-CCcCCEEEECCCe
Confidence 244677889998888754432 2456889888774
No 286
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=99.53 E-value=1.8e-12 Score=108.12 Aligned_cols=215 Identities=10% Similarity=0.048 Sum_probs=130.0
Q ss_pred CCCCEEEEEcCCC--hhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 26 DAKNVAVIFGVTG--LVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
+.+|+++||||+| .||+.+++.|. +.|++|++++|++.... ....++.++++|++|.++++++++.
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLD-QLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4679999999987 89999999999 68999999999865432 1134688999999999888776653
Q ss_pred ----cCceeEEeecccc--------cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccc
Q 042242 93 ----LEDVTHIFWVTWA--------SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 93 ----~~~V~~~~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
+|.++|.++.... +...++....+++|+.++..+..++....++--.++.+++.......
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~-------- 154 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV-------- 154 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC--------
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc--------
Confidence 4556666543211 12233333467889888888887776653332344444432111000
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
+. ... |+.+|.... +....+++..+.||.|-.+........ .. ....+.. ..|
T Consensus 155 --------~~--~~~---Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~-~~--~~~~~~~--~~P 216 (256)
T 4fs3_A 155 --------QN--YNV---MGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGF-NT--ILKEIKE--RAP 216 (256)
T ss_dssp --------TT--THH---HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH-HH--HHHHHHH--HST
T ss_pred --------cc--chh---hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCC-HH--HHHHHHh--cCC
Confidence 00 112 666655332 322229999999998876432211110 01 1111111 122
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+. .+..++|+|.++++++..... ...|+.+.+.+|.
T Consensus 217 l~-------------R~g~peevA~~v~fL~Sd~a~-~iTG~~i~VDGG~ 252 (256)
T 4fs3_A 217 LK-------------RNVDQVEVGKTAAYLLSDLSS-GVTGENIHVDSGF 252 (256)
T ss_dssp TS-------------SCCCHHHHHHHHHHHHSGGGT-TCCSCEEEESTTG
T ss_pred CC-------------CCcCHHHHHHHHHHHhCchhc-CccCCEEEECcCH
Confidence 11 245778999999988754432 2456888888774
No 287
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.53 E-value=2.3e-15 Score=130.37 Aligned_cols=161 Identities=11% Similarity=0.059 Sum_probs=102.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-------eEEEEecCCc--cc-----cccCCCeEEEEecCCCHHHHHHHHhcc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-------KVYGIARKPE--IT-----AIQSSSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~--~~-----~~~~~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
.+||+||||+||||++++..|+ ..|+ +|+++++.+. .. ......+.++ .|+.+...+.++++++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~-~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~ 81 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIA-AGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDA 81 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHH-TTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHH-hCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCC
Confidence 3589999999999999999999 5775 8999998642 11 1111122233 5776666678889999
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcC-cCC-CC
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD-EEC-PR 170 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~-e~~-~~ 170 (303)
|.|+|+|+...... .++.++++.|+.++.++++++++.+ +..+.+++.+.... ..+.. +.. ..
T Consensus 82 D~Vih~Ag~~~~~~--~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~------------~~~~~~~~~~~~ 147 (327)
T 1y7t_A 82 DYALLVGAAPRKAG--MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANT------------NALIAYKNAPGL 147 (327)
T ss_dssp SEEEECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH------------HHHHHHHTCTTS
T ss_pred CEEEECCCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhh------------hHHHHHHHcCCC
Confidence 99999987654322 2334589999999999999999875 44333222111100 01111 111 12
Q ss_pred CCCCccchHHHHHHHHH-----Hhc--CCcceEEecCCceeecCC
Q 042242 171 VSKSNNFYYVLEDLLKE-----KLA--GKVAWSVHRPGLLLGSSH 208 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e-----~~~--~~~~~~ilRp~~v~G~~~ 208 (303)
.|..+ |+.+|+..+ +.+ + ++.+++||++|||++.
T Consensus 148 ~p~~~---yg~tkl~~er~~~~~a~~~g-~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 148 NPRNF---TAMTRLDHNRAKAQLAKKTG-TGVDRIRRMTVWGNHS 188 (327)
T ss_dssp CGGGE---EECCHHHHHHHHHHHHHHHT-CCGGGEECCEEEBCSS
T ss_pred Chhhe---eccchHHHHHHHHHHHHHhC-cChhheeeeEEEcCCC
Confidence 22333 555444333 332 4 8899999999999754
No 288
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=99.52 E-value=1e-13 Score=116.05 Aligned_cols=157 Identities=13% Similarity=0.087 Sum_probs=104.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-------cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-------QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++..... ...++.++.+|++|.++++++++.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLC-KAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 456899999999999999999999 689999999998654320 123578899999999988777654
Q ss_pred --cCceeEEee--cc---------cccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCc
Q 042242 93 --LEDVTHIFW--VT---------WASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPE 157 (303)
Q Consensus 93 --~~~V~~~~~--~~---------~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g 157 (303)
+|.++|.++ .. ....+.....+.+++|+.++..+..++... ..+..+++.+++...+..
T Consensus 82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 155 (260)
T 2qq5_A 82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY------ 155 (260)
T ss_dssp TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC------
T ss_pred CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC------
Confidence 356888873 11 112233344458889999988777776543 112245555554322210
Q ss_pred ccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeec
Q 042242 158 EKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 158 ~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~ 206 (303)
.+..+ |+.+|...+ +. .+ +++++++|+.+..+
T Consensus 156 -------------~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~ 197 (260)
T 2qq5_A 156 -------------MFNVP---YGVGKAACDKLAADCAHELRRHG-VSCVSLWPGIVQTE 197 (260)
T ss_dssp -------------CSSHH---HHHHHHHHHHHHHHHHHHHGGGT-CEEEEEECCCSCTT
T ss_pred -------------CCCCc---hHHHHHHHHHHHHHHHHHhccCC-eEEEEEecCccccH
Confidence 01223 777766554 11 24 99999999999874
No 289
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=99.52 E-value=2.8e-13 Score=114.05 Aligned_cols=217 Identities=11% Similarity=-0.020 Sum_probs=132.8
Q ss_pred CCCCEEEEEcC--CChhHHHHHHHHhhcCCCeEEEEecCCccc-c----ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGV--TGLVGKELARRLISTANWKVYGIARKPEIT-A----IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+++|+|+|||| +|+||++++++|+ +.|++|++++|++.+. . ....++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQ-EQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 83 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHH-HCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35689999999 9999999999999 6899999999987542 1 112357889999999999888776
Q ss_pred ---ccCceeEEeeccc---------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccc
Q 042242 92 ---LLEDVTHIFWVTW---------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEK 159 (303)
Q Consensus 92 ---~~~~V~~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~ 159 (303)
.+|.++|.++... ...+..+..+.+++|+.++..+++++.....+-.+++.+++...++
T Consensus 84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~--------- 154 (269)
T 2h7i_A 84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA--------- 154 (269)
T ss_dssp TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC---------
T ss_pred CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc---------
Confidence 5566888876432 1223445556899999999999999876521112444443311110
Q ss_pred ccCCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCcc-c-hhhHHH----HH-HH
Q 042242 160 QVRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLY-N-FLGCLC----VY-GA 223 (303)
Q Consensus 160 ~~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~-~-~~~~~~----~~-~~ 223 (303)
......|+.+|...+ ..... +++..++|+.+..+...... . ...... .. ..
T Consensus 155 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (269)
T 2h7i_A 155 -------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEG 221 (269)
T ss_dssp -------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred -------------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHh
Confidence 001112677665443 11122 99999999988763100000 0 000000 00 00
Q ss_pred HhhhCCCceeeCCchhhhhhhcc-cCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 224 VCKHLNLPFVFGGTREIWEEYCL-DGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+.. ..| +- .+.+++|+|.++++++...... ..|+.+++.++.
T Consensus 222 ~~~--~~p-------------~~rr~~~p~dvA~~v~~L~s~~~~~-itG~~i~vdGG~ 264 (269)
T 2h7i_A 222 WDQ--RAP-------------IGWNMKDATPVAKTVCALLSDWLPA-TTGDIIYADGGA 264 (269)
T ss_dssp HHH--HCT-------------TCCCTTCCHHHHHHHHHHHSSSCTT-CCSEEEEESTTG
T ss_pred hhc--cCC-------------cccCCCCHHHHHHHHHHHhCchhcc-CcceEEEecCCe
Confidence 000 011 11 2457789999999988654322 456888888774
No 290
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=99.51 E-value=1.5e-13 Score=118.87 Aligned_cols=156 Identities=16% Similarity=0.142 Sum_probs=106.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--------cCCCeEEEEecCCCHHHHHHHHhc--
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--------QSSSYCFISCDLLNPLDIKRKLTL-- 92 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--------~~~~~~~~~~D~~~~~~l~~~~~~-- 92 (303)
+|+|+||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|++|.+++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~-~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLA-SDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHH-TCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 4789999999999999999999 68999888887543321 0 024688999999999999999886
Q ss_pred ---cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 ---LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 ---~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|.++.... ..+..+..+.+++|+.++.++++++... .....+++.+++...+...
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~----------- 149 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL----------- 149 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------
Confidence 5668888764321 2234455568999999999999987543 1123344444443222110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeec
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~ 206 (303)
+ .... |+.+|...+ +. .+ +++++++|+.|..+
T Consensus 150 -----~--~~~~---Y~aSK~a~~~~~~~la~el~~~g-I~v~~v~PG~v~T~ 191 (327)
T 1jtv_A 150 -----P--FNDV---YCASKFALEGLCESLAVLLLPFG-VHLSLIECGPVHTA 191 (327)
T ss_dssp -----T--TCHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECCBCC-
T ss_pred -----C--CChH---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEEeCcccCh
Confidence 0 0122 777776554 11 23 99999999999874
No 291
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=99.51 E-value=8.9e-14 Score=115.36 Aligned_cols=213 Identities=11% Similarity=0.060 Sum_probs=122.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-e--cCCccccc---cCCCeEEEEecCCCHHHH-HHHHh---ccCcee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGI-A--RKPEITAI---QSSSYCFISCDLLNPLDI-KRKLT---LLEDVT 97 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~--r~~~~~~~---~~~~~~~~~~D~~~~~~l-~~~~~---~~~~V~ 97 (303)
+|+++||||+|+||++++++|+ +.|++|+++ + |++.+... +..+..+. |..+.+.+ +++.+ .+|.++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv 77 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALT-QDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIV 77 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHH-HTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEE
Confidence 3789999999999999999999 689999999 6 87654321 01222222 44444333 22322 355688
Q ss_pred EEeecccc-------cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 98 HIFWVTWA-------SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 98 ~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
|.++.... ..+..+..+.+++|+.++..+++++... ..+..+++.+++...+...
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------- 141 (244)
T 1zmo_A 78 SNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL---------------- 141 (244)
T ss_dssp ECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------------
T ss_pred ECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC----------------
Confidence 88764322 2234555568999999999999988654 1223455555543332110
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
.+... |+.+|...+ .. .+ +++++++|+.+..+........ ..-.....+... ..|
T Consensus 142 --~~~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~-~~p------- 206 (244)
T 1zmo_A 142 --AYNPL---YGPARAATVALVESAAKTLSRDG-ILLYAIGPNFFNNPTYFPTSDW-ENNPELRERVDR-DVP------- 206 (244)
T ss_dssp --TTCTT---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEESSBCBTTTBCHHHH-HHCHHHHHHHHH-HCT-------
T ss_pred --CCchH---HHHHHHHHHHHHHHHHHHHhhcC-cEEEEEeeCCCcCCcccccccc-cchHHHHHHHhc-CCC-------
Confidence 00223 777766544 11 23 9999999998876321000000 000000001000 011
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|.++++++...... ..|+.+.+.++.
T Consensus 207 ------~~r~~~pe~vA~~v~~l~s~~~~~-~tG~~i~vdgG~ 242 (244)
T 1zmo_A 207 ------LGRLGRPDEMGALITFLASRRAAP-IVGQFFAFTGGY 242 (244)
T ss_dssp ------TCSCBCHHHHHHHHHHHHTTTTGG-GTTCEEEESTTC
T ss_pred ------CCCCcCHHHHHHHHHHHcCccccC-ccCCEEEeCCCC
Confidence 112567899999999988654322 345888887764
No 292
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=99.51 E-value=3.7e-13 Score=115.44 Aligned_cols=122 Identities=14% Similarity=0.118 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---cCCCeEEEEecCCCH-HHHHHHHh-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I---QSSSYCFISCDLLNP-LDIKRKLT----- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~~~-~~l~~~~~----- 91 (303)
..+|+||||||+|+||++++++|+ ..|++|++++|+..+.. . ...++.++.+|++|. ++++.+++
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLS-SNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 356899999999999999999999 68999999999875431 1 124688999999998 77666654
Q ss_pred --ccCceeEEeecccc----------------------------------cCChHHHHHHHHHHHHHHHHHHHHHhhc--
Q 042242 92 --LLEDVTHIFWVTWA----------------------------------SQFASDMHKCCEQNKAMMCNALNAILPR-- 133 (303)
Q Consensus 92 --~~~~V~~~~~~~~~----------------------------------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-- 133 (303)
.+|.++|.|+.... ........+.+++|+.++..+++++...
T Consensus 89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~ 168 (311)
T 3o26_A 89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ 168 (311)
T ss_dssp HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence 56678888775421 1123344457999999999999988654
Q ss_pred cCCccEEEEeecccc
Q 042242 134 AKALKHVSLQTGMKH 148 (303)
Q Consensus 134 ~~~~~~~~~~s~~~~ 148 (303)
..+..+++.+++...
T Consensus 169 ~~~~~~IV~isS~~~ 183 (311)
T 3o26_A 169 LSDSPRIVNVSSSTG 183 (311)
T ss_dssp TSSSCEEEEECCGGG
T ss_pred cCCCCeEEEEecCCc
Confidence 122345555555433
No 293
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=99.50 E-value=3.8e-13 Score=112.53 Aligned_cols=157 Identities=15% Similarity=0.076 Sum_probs=107.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhc---CCCeEEEEecCCcccc-----c----cCCCeEEEEecCCCHHHHHHHHhc-
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLIST---ANWKVYGIARKPEITA-----I----QSSSYCFISCDLLNPLDIKRKLTL- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~---~g~~V~~~~r~~~~~~-----~----~~~~~~~~~~D~~~~~~l~~~~~~- 92 (303)
+.+|+++||||+|+||++++++|+ + .|++|++++|++.... . ...++.++.+|++|.++++++++.
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~-~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLA-RLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHH-TTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHH-HhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 356899999999999999999999 5 7999999999865432 0 023578899999999988777653
Q ss_pred --------cC--ceeEEeecccc------c-CChHHHHHHHHHHHHHHHHHHHHHhhcc-C---CccEEEEeeccccccc
Q 042242 93 --------LE--DVTHIFWVTWA------S-QFASDMHKCCEQNKAMMCNALNAILPRA-K---ALKHVSLQTGMKHYVS 151 (303)
Q Consensus 93 --------~~--~V~~~~~~~~~------~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~---~~~~~~~~s~~~~y~~ 151 (303)
.| .++|.++.... . .+..+..+.+++|+.++..+++++.... . ...+++.+++...+..
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 162 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence 35 67787764321 1 2445556689999999999999987652 1 2345666655333211
Q ss_pred ccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCCcceEEecCCceee
Q 042242 152 LQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGKVAWSVHRPGLLLG 205 (303)
Q Consensus 152 ~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~~~~~ilRp~~v~G 205 (303)
. .+... |+.+|...+ +. .. +++..++|+.+-.
T Consensus 163 ~------------------~~~~~---Y~asKaa~~~~~~~la~e~~~-i~vn~v~PG~v~T 202 (259)
T 1oaa_A 163 Y------------------KGWGL---YCAGKAARDMLYQVLAAEEPS-VRVLSYAPGPLDN 202 (259)
T ss_dssp C------------------TTCHH---HHHHHHHHHHHHHHHHHHCTT-EEEEEEECCSBSS
T ss_pred C------------------CCccH---HHHHHHHHHHHHHHHHhhCCC-ceEEEecCCCcCc
Confidence 0 00222 787776554 11 23 8889999987754
No 294
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=99.50 E-value=8.6e-13 Score=108.45 Aligned_cols=215 Identities=14% Similarity=0.087 Sum_probs=133.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
..+|+++||||++.||+.+++.|. +.|++|++.+|+..+.. ....++..+++|++|++++++.++. +|.++|
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLA-AAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHH-HcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 468999999999999999999999 68999999999865321 2234678899999999888777754 444666
Q ss_pred Eeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc---cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 99 IFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR---AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 99 ~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
.|+... .+.+.++..+.+++|+.++..+.+++... ..+--.++.+++...+.+. +.
T Consensus 86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~----------------~~- 148 (247)
T 4hp8_A 86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG----------------IR- 148 (247)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------------SS-
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC----------------CC-
Confidence 655432 23345556669999999999988876543 1122344444442221110 00
Q ss_pred CCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 172 SKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
... |..+|.-.. +....+++..+.||.|-.+... ...........+.. ..|+.
T Consensus 149 -~~~---Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~---~~~~~~~~~~~~~~--~~Plg--------- 210 (247)
T 4hp8_A 149 -VPS---YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE---ALRADAARNKAILE--RIPAG--------- 210 (247)
T ss_dssp -CHH---HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH---HHHTSHHHHHHHHT--TCTTS---------
T ss_pred -ChH---HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh---hcccCHHHHHHHHh--CCCCC---------
Confidence 112 776554332 3322299999999998763211 00000011111111 22321
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.+-.++|+|.++++++..... ...|+.+.+.+|.
T Consensus 211 ----R~g~peeiA~~v~fLaSd~a~-~iTG~~i~VDGG~ 244 (247)
T 4hp8_A 211 ----RWGHSEDIAGAAVFLSSAAAD-YVHGAILNVDGGW 244 (247)
T ss_dssp ----SCBCTHHHHHHHHHHTSGGGT-TCCSCEEEESTTG
T ss_pred ----CCcCHHHHHHHHHHHhCchhc-CCcCCeEEECccc
Confidence 245778999999988755432 2456888888774
No 295
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=99.48 E-value=4.5e-13 Score=121.74 Aligned_cols=209 Identities=12% Similarity=0.093 Sum_probs=131.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCcccc--------c--cCCCeEEEEecCCCHHHHHHHHhcc--
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITA--------I--QSSSYCFISCDLLNPLDIKRKLTLL-- 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~--------~--~~~~~~~~~~D~~~~~~l~~~~~~~-- 93 (303)
.+++||||||+|+||.+++++|+ ..|++ |++++|++.... . ...++.++.+|++|.+++.++++.+
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La-~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~ 303 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLA-RRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 303 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-HHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 46899999999999999999999 56885 999999865211 1 1236788999999999999999876
Q ss_pred ----CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 94 ----EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 94 ----~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
|.|||+++.... ..+.......++.|+.++.++++++... ...+++++|+...+.+..
T Consensus 304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~g~~------------ 369 (486)
T 2fr1_A 304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAP------------ 369 (486)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCT------------
T ss_pred cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcCCCC------------
Confidence 558998775332 2344455567899999999999999875 234455544432221110
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H-hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K-LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~-~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
.... |+.+|...+ . ..+ +++++++|+.+.+.+ .. ... ... .+ .
T Consensus 370 ------g~~~---Yaaaka~l~~la~~~~~~g-i~v~~i~pG~~~~~g--m~----~~~-----~~~----~~--~---- 418 (486)
T 2fr1_A 370 ------GLGG---YAPGNAYLDGLAQQRRSDG-LPATAVAWGTWAGSG--MA----EGP-----VAD----RF--R---- 418 (486)
T ss_dssp ------TCTT---THHHHHHHHHHHHHHHHTT-CCCEEEEECCBC---------------------------C--T----
T ss_pred ------CCHH---HHHHHHHHHHHHHHHHhcC-CeEEEEECCeeCCCc--cc----chh-----HHH----HH--H----
Confidence 0122 666655444 2 234 999999999988732 11 000 000 00 0
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHH
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIG 293 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~ 293 (303)
+.-...++.++++.++..++..+.. . +.+.. +.|..+...+.
T Consensus 419 ---~~g~~~i~~e~~a~~l~~~l~~~~~-----~-~~v~~---~d~~~~~~~~~ 460 (486)
T 2fr1_A 419 ---RHGVIEMPPETACRALQNALDRAEV-----C-PIVID---VRWDRFLLAYT 460 (486)
T ss_dssp ---TTTEECBCHHHHHHHHHHHHHTTCS-----S-CEECE---ECHHHHHHHHT
T ss_pred ---hcCCCCCCHHHHHHHHHHHHhCCCC-----e-EEEEe---CCHHHHhhhhc
Confidence 1112356888999999888876532 1 22322 45666665443
No 296
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=99.46 E-value=6.4e-13 Score=114.47 Aligned_cols=154 Identities=10% Similarity=-0.010 Sum_probs=98.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC---------Ccccc-----ccCCCeEEEEecCCCHHHHHHHHh
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARK---------PEITA-----IQSSSYCFISCDLLNPLDIKRKLT 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~---------~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~ 91 (303)
+.+|+|+||||+|+||+++++.|+ ..|++|++++|. ..+.. ....+. ...+|+.+.++++++++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La-~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFA-ERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVK 84 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHH
Confidence 456899999999999999999999 689999997653 22211 111111 23589999887666543
Q ss_pred -------ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcc
Q 042242 92 -------LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 92 -------~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~ 158 (303)
.+|.+||.|+.... ..+.......+++|+.++..+++++... .....+++.+++...+.+.
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~------ 158 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN------ 158 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC------
Confidence 45668888765322 2244455568999999999999887553 1123455555543221010
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCce
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLL 203 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v 203 (303)
+ +... |+.+|...+ +. .+ +++.+++|+.+
T Consensus 159 ----~--------~~~~---Y~aSK~a~~~~~~~la~el~~~g-I~vn~v~PG~~ 197 (319)
T 1gz6_A 159 ----F--------GQAN---YSAAKLGLLGLANTLVIEGRKNN-IHCNTIAPNAG 197 (319)
T ss_dssp ----T--------TCHH---HHHHHHHHHHHHHHHHHHTGGGT-EEEEEEEEECC
T ss_pred ----C--------CCHH---HHHHHHHHHHHHHHHHHHhcccC-EEEEEEeCCCc
Confidence 0 0222 787776554 11 23 99999999876
No 297
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=99.43 E-value=2.2e-12 Score=117.75 Aligned_cols=210 Identities=13% Similarity=0.139 Sum_probs=132.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc--------cc--CCCeEEEEecCCCHHHHHHHHhc--c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA--------IQ--SSSYCFISCDLLNPLDIKRKLTL--L 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~--------~~--~~~~~~~~~D~~~~~~l~~~~~~--~ 93 (303)
.+++||||||+|+||.+++++|. +.|+ .|++++|+..... .. ..++.++.+|++|.+++.++++. +
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La-~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l 336 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLA-AEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP 336 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-HTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-hCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence 46899999999999999999998 6888 4999999864311 11 23578899999999999999987 7
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccc-ccccccCCCcccccCCcCcCC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMK-HYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~-~y~~~~~~~g~~~~~~~~e~~ 168 (303)
|.|||+++.... ..+.......++.|+.++.++.+++... ....+++++|+.. .|+..
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~~g~~---------------- 399 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGTWGNA---------------- 399 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGTTCCT----------------
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhcCCCC----------------
Confidence 779999775432 2234444567899999999999988754 1233444444321 22111
Q ss_pred CCCCCCccchHHHHHHHHHH----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhh
Q 042242 169 PRVSKSNNFYYVLEDLLKEK----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEE 243 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e~----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (303)
.... |+.+|...+. .... +++++++|+.+.+ .+..... .. ..+. +
T Consensus 400 ---g~~~---YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~--tgm~~~~--~~---~~~~-----------------~ 449 (511)
T 2z5l_A 400 ---GQGA---YAAANAALDALAERRRAAGLPATSVAWGLWGG--GGMAAGA--GE---ESLS-----------------R 449 (511)
T ss_dssp ---TBHH---HHHHHHHHHHHHHHHHTTTCCCEEEEECCBCS--TTCCCCH--HH---HHHH-----------------H
T ss_pred ---CCHH---HHHHHHHHHHHHHHHHHcCCcEEEEECCcccC--Ccccccc--cH---HHHH-----------------h
Confidence 0122 7777665552 1222 9999999988743 1211111 00 0010 1
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHH
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIG 293 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~ 293 (303)
.-+...+.++++.+++.++..+.. .+.+.. +.|..+...+.
T Consensus 450 ~g~~~l~~e~~a~~l~~al~~~~~------~v~v~~---~d~~~~~~~~~ 490 (511)
T 2z5l_A 450 RGLRAMDPDAAVDALLGAMGRNDV------CVTVVD---VDWERFAPATN 490 (511)
T ss_dssp HTBCCBCHHHHHHHHHHHHHHTCS------EEEECC---BCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhCCCC------EEEEEe---CCHHHHHhhhc
Confidence 112356788999999888866532 232332 45666665543
No 298
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=99.42 E-value=2.2e-11 Score=103.83 Aligned_cols=216 Identities=12% Similarity=0.060 Sum_probs=124.0
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCC-----------cccc----ccCCC----eEEEEecC----
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKP-----------EITA----IQSSS----YCFISCDL---- 80 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~-----------~~~~----~~~~~----~~~~~~D~---- 80 (303)
+++|+++||||+ |+||++++++|+ +.|++|++++|++ .+.. ..... ...+.+|+
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLA-AAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHH-HTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHH-HCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence 356899999999 999999999999 6899999998642 1110 00001 23344432
Q ss_pred ----C----C--------HHHHHHHHh-------ccCceeEEeecc------cccCChHHHHHHHHHHHHHHHHHHHHHh
Q 042242 81 ----L----N--------PLDIKRKLT-------LLEDVTHIFWVT------WASQFASDMHKCCEQNKAMMCNALNAIL 131 (303)
Q Consensus 81 ----~----~--------~~~l~~~~~-------~~~~V~~~~~~~------~~~~~~~~~~~~~~~n~~~~~~ll~~~~ 131 (303)
. | .++++++++ .+|.++|.|+.. ....+..+..+.+++|+.++..+++++.
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 2 1 334444433 456688887532 1233445556689999999999999998
Q ss_pred hccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh--cCCcceEEecC
Q 042242 132 PRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL--AGKVAWSVHRP 200 (303)
Q Consensus 132 ~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~--~~~~~~~ilRp 200 (303)
....+-.+++.+++...+.+. +.. ..+ |+.+|...+ +. .+ +++..++|
T Consensus 165 ~~m~~~g~iv~isS~~~~~~~----------------~~~-~~~---Y~asKaa~~~~~~~la~e~~~~~g-i~vn~v~P 223 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASERII----------------PGY-GGG---MSSAKAALESDTRVLAFEAGRKQN-IRVNTISA 223 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCC----------------TTC-TTT---HHHHHHHHHHHHHHHHHHHHHHHC-CEEEEEEE
T ss_pred HHhccCceEEEEeccccccCC----------------CCc-chH---HHHHHHHHHHHHHHHHHHhCcccC-cEEEEEec
Confidence 752111344444442222100 000 023 777666443 22 35 99999999
Q ss_pred CceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 201 GLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 201 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+.+.++..... ...... ...+.. ..|+ ..+.+++|+|.++++++...... ..|+.+++.++
T Consensus 224 G~v~T~~~~~~-~~~~~~--~~~~~~--~~p~-------------~r~~~pedvA~~v~~l~s~~~~~-itG~~i~vdgG 284 (297)
T 1d7o_A 224 GPLGSRAAKAI-GFIDTM--IEYSYN--NAPI-------------QKTLTADEVGNAAAFLVSPLASA-ITGATIYVDNG 284 (297)
T ss_dssp CCCBCCCSSCC-SHHHHH--HHHHHH--HSSS-------------CCCBCHHHHHHHHHHHTSGGGTT-CCSCEEEESTT
T ss_pred cccccchhhhc-cccHHH--HHHhhc--cCCC-------------CCCCCHHHHHHHHHHHhCccccC-CCCCEEEECCC
Confidence 99998532211 110111 011111 1121 12457899999999887643221 34688999887
Q ss_pred CC
Q 042242 281 PR 282 (303)
Q Consensus 281 ~~ 282 (303)
..
T Consensus 285 ~~ 286 (297)
T 1d7o_A 285 LN 286 (297)
T ss_dssp GG
T ss_pred ce
Confidence 43
No 299
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=99.41 E-value=3.1e-12 Score=116.01 Aligned_cols=155 Identities=15% Similarity=0.078 Sum_probs=106.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc----------ccCCCeEEEEecCCCHHHHHHHHhcc--
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA----------IQSSSYCFISCDLLNPLDIKRKLTLL-- 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~----------~~~~~~~~~~~D~~~~~~l~~~~~~~-- 93 (303)
|++++|||||+|.||.+++++|. ..|+ .|+++.|+..... ....++.++.+|++|.+++.++++.+
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La-~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 316 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLA-EQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE 316 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHH-HTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred CCCEEEEECCCCchHHHHHHHHH-HCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 55899999999999999999999 6788 6888888753321 11236888999999999999998753
Q ss_pred ----CceeEEeecc-c----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCc
Q 042242 94 ----EDVTHIFWVT-W----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 94 ----~~V~~~~~~~-~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
|.|||.++.. . ...+.......++.|+.++.++.+++.... ..+++.+|+...+.+..
T Consensus 317 ~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~--~~~iV~~SS~a~~~g~~----------- 383 (496)
T 3mje_A 317 DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD--LDAFVLFSSGAAVWGSG----------- 383 (496)
T ss_dssp TSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC--CSEEEEEEEHHHHTTCT-----------
T ss_pred hCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC--CCEEEEEeChHhcCCCC-----------
Confidence 4588887654 1 223344555689999999999999988762 23444444322221110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----H-hcCCcceEEecCCceeec
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----K-LAGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~-~~~~~~~~ilRp~~v~G~ 206 (303)
.... |+.+|...+ . ..+ ++++++.|+.+.+.
T Consensus 384 -------g~~~---YaAaKa~ldala~~~~~~G-i~v~sV~pG~w~~~ 420 (496)
T 3mje_A 384 -------GQPG---YAAANAYLDALAEHRRSLG-LTASSVAWGTWGEV 420 (496)
T ss_dssp -------TCHH---HHHHHHHHHHHHHHHHHTT-CCCEEEEECEESSS
T ss_pred -------CcHH---HHHHHHHHHHHHHHHHhcC-CeEEEEECCcccCC
Confidence 0122 777665444 1 234 99999999988763
No 300
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=99.30 E-value=2.3e-11 Score=113.61 Aligned_cols=120 Identities=13% Similarity=0.047 Sum_probs=79.0
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC---------Ccccc-----ccCCCeEEEEecCCCHHHHHHH
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARK---------PEITA-----IQSSSYCFISCDLLNPLDIKRK 89 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~---------~~~~~-----~~~~~~~~~~~D~~~~~~l~~~ 89 (303)
..+.+|+++||||+|.||++++++|+ +.|++|++++|. ..... ....+. ...+|+.|.+++.++
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La-~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~ 92 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFA-ERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKV 92 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHH
Confidence 34567999999999999999999999 689999999882 22111 111122 234899999887777
Q ss_pred Hhc-------cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeec
Q 042242 90 LTL-------LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTG 145 (303)
Q Consensus 90 ~~~-------~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~ 145 (303)
++. +|.++|.|+.... ..+..+....+++|+.++.++++++... ..+..+++.+++
T Consensus 93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS 161 (613)
T 3oml_A 93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS 161 (613)
T ss_dssp HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 763 5668888765322 2345555668999999999999998554 122345555554
No 301
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=99.29 E-value=3.1e-11 Score=110.58 Aligned_cols=155 Identities=14% Similarity=0.076 Sum_probs=106.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEE-ecCCcc-------------cc-----c--cCCCeEEEEecCCCHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGI-ARKPEI-------------TA-----I--QSSSYCFISCDLLNPL 84 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~-~r~~~~-------------~~-----~--~~~~~~~~~~D~~~~~ 84 (303)
.++++|||||+|.||.+++++|. ..|++ |+++ +|++.. .. . ...++.++.+|++|.+
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La-~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLA-RDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHH-HHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 46899999999999999999999 57887 6666 787432 10 0 1235888999999999
Q ss_pred HHHHHHhcc------CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCC---ccEEEEeeccccccc
Q 042242 85 DIKRKLTLL------EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRAKA---LKHVSLQTGMKHYVS 151 (303)
Q Consensus 85 ~l~~~~~~~------~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~---~~~~~~~s~~~~y~~ 151 (303)
++.++++.+ |.|||.++... ...+..+....++.|+.++.++.+++...... ..+++.+|+...+.+
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g 408 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG 408 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence 999999864 45888876532 23344555568999999999999998876311 445555554322211
Q ss_pred ccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHHHh----cCC-cceEEecCCce
Q 042242 152 LQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKEKL----AGK-VAWSVHRPGLL 203 (303)
Q Consensus 152 ~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e~~----~~~-~~~~ilRp~~v 203 (303)
.. .... |+.+|...+.. ... ++++++.|+.+
T Consensus 409 ~~------------------g~~~---YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 409 GA------------------GQGA---YAAGTAFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp CT------------------TCHH---HHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred CC------------------CCHH---HHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 10 0222 88877766621 122 89999999888
No 302
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=99.27 E-value=1.4e-10 Score=100.43 Aligned_cols=156 Identities=12% Similarity=0.032 Sum_probs=99.2
Q ss_pred CCEEEEEcCCC--hhHHHHHHHHhhcCCCeEEEEecCC---------ccc----c-c-----cCCCeEEEEecCCCH--H
Q 042242 28 KNVAVIFGVTG--LVGKELARRLISTANWKVYGIARKP---------EIT----A-I-----QSSSYCFISCDLLNP--L 84 (303)
Q Consensus 28 ~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~---------~~~----~-~-----~~~~~~~~~~D~~~~--~ 84 (303)
+|+++||||++ .||.+++++|+ ..|++|++.+|++ .+. . . ....+.++.+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la-~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELS-KRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHH-HTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHH-HCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 57999999875 99999999999 6899999777554 110 0 0 112367888898877 5
Q ss_pred ------------------HHHHHHhc-------cCceeEEeecc------cccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 85 ------------------DIKRKLTL-------LEDVTHIFWVT------WASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 85 ------------------~l~~~~~~-------~~~V~~~~~~~------~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
++.++++. +|.++|.|+.. ....+.....+.+++|+.++..+++++...
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 55555543 45577776532 122334555568999999999999998876
Q ss_pred cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC-ccchHHHHHHHHH---------Hh--cCCcceEEecCC
Q 042242 134 AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS-NNFYYVLEDLLKE---------KL--AGKVAWSVHRPG 201 (303)
Q Consensus 134 ~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~-~~~~y~~~k~~~e---------~~--~~~~~~~ilRp~ 201 (303)
...-.+++.+++...+... +. .. . |+.+|.... +. .+ +++..+.||
T Consensus 161 m~~~g~Iv~isS~~~~~~~----------------~~--~~~~---Y~asKaal~~~~~~la~el~~~~g-I~vn~v~PG 218 (329)
T 3lt0_A 161 MKPQSSIISLTYHASQKVV----------------PG--YGGG---MSSAKAALESDTRVLAYHLGRNYN-IRINTISAG 218 (329)
T ss_dssp EEEEEEEEEEECGGGTSCC----------------TT--CTTT---HHHHHHHHHHHHHHHHHHHHHHHC-CEEEEEEEC
T ss_pred HhhCCeEEEEeCccccCCC----------------Cc--chHH---HHHHHHHHHHHHHHHHHHhCCccC-eEEEEEecc
Confidence 2211345555443222100 00 11 3 777665443 22 25 999999999
Q ss_pred ceeec
Q 042242 202 LLLGS 206 (303)
Q Consensus 202 ~v~G~ 206 (303)
.|..+
T Consensus 219 ~v~T~ 223 (329)
T 3lt0_A 219 PLKSR 223 (329)
T ss_dssp CCCCH
T ss_pred eeech
Confidence 88763
No 303
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=99.26 E-value=1.4e-10 Score=99.94 Aligned_cols=221 Identities=11% Similarity=0.003 Sum_probs=111.4
Q ss_pred CCCCEEEEEcC--CChhHHHHHHHHhhcCCCeEEEEecCC-----------cccc----------------ccCC-----
Q 042242 26 DAKNVAVIFGV--TGLVGKELARRLISTANWKVYGIARKP-----------EITA----------------IQSS----- 71 (303)
Q Consensus 26 ~~~~~vlVtGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~-----------~~~~----------------~~~~----- 71 (303)
+.+|+++|||| +|+||++++++|+ +.|++|++++|++ .... ....
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la-~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLR-AAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV 85 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHH-HTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHH-HCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence 34689999999 8999999999999 6899999998642 1100 0000
Q ss_pred CeEEEEecC------------CC--------HHHHHHHHh-------ccCceeEEeecc------cccCChHHHHHHHHH
Q 042242 72 SYCFISCDL------------LN--------PLDIKRKLT-------LLEDVTHIFWVT------WASQFASDMHKCCEQ 118 (303)
Q Consensus 72 ~~~~~~~D~------------~~--------~~~l~~~~~-------~~~~V~~~~~~~------~~~~~~~~~~~~~~~ 118 (303)
...++.+|+ +| .++++++++ .+|.++|.++.. ....+..+....+++
T Consensus 86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v 165 (319)
T 2ptg_A 86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS 165 (319)
T ss_dssp CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence 024444442 22 223444433 456688887642 122344455568999
Q ss_pred HHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH--------HH-HHh
Q 042242 119 NKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL--------LK-EKL 189 (303)
Q Consensus 119 n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~--------~~-e~~ 189 (303)
|+.++..+++++.....+-.+++.+++...+... + .. ... |+.+|. +. |+.
T Consensus 166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------~------~~-~~~---Y~asKaal~~l~~~la~el~ 225 (319)
T 2ptg_A 166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI----------P------GY-GGG---MSSAKAALESDCRTLAFEAG 225 (319)
T ss_dssp HTHHHHHHHHHHGGGEEEEEEEEEEEECC--------------------------------------THHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcCceEEEEecccccccc----------C------cc-chh---hHHHHHHHHHHHHHHHHHhc
Confidence 9999999999988752111234443332121000 0 00 011 444332 22 232
Q ss_pred --cCCcceEEecCCceeecCCCCccchhhHHHHH-HHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcC
Q 042242 190 --AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVY-GAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 190 --~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
.+ +++..++|+.|..+....... .....+ ..... . .... ..+..+.+++++|.++++++....
T Consensus 226 ~~~g-Irvn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~----~-~~~~------~p~~r~~~peevA~~v~~L~s~~~ 291 (319)
T 2ptg_A 226 RARA-VRVNCISAGPLKSRAASAIGK--AGDKTFIDLAID----Y-SEAN------APLQKELESDDVGRAALFLLSPLA 291 (319)
T ss_dssp HHHC-CEEEEEEECCCC--------------------------------------------CCCHHHHHHHHHHHTSGGG
T ss_pred cccC-eeEEEEeeCCccChhhhhccc--ccchhhHHHHHH----H-Hhcc------CCCCCCCCHHHHHHHHHHHhCccc
Confidence 35 999999999987642111000 000000 00000 0 0000 111125578999999999886533
Q ss_pred CcCCCCceEEeecCCC
Q 042242 267 ISSTKGQAFNAINGPR 282 (303)
Q Consensus 267 ~~~~~g~~yni~~~~~ 282 (303)
.. ..|+.+.+.++..
T Consensus 292 ~~-itG~~i~vdGG~~ 306 (319)
T 2ptg_A 292 RA-VTGATLYVDNGLH 306 (319)
T ss_dssp TT-CCSCEEEESTTCT
T ss_pred CC-ccCCEEEECCCce
Confidence 21 4568898888754
No 304
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=99.25 E-value=7.4e-10 Score=95.17 Aligned_cols=218 Identities=13% Similarity=0.006 Sum_probs=120.0
Q ss_pred CCCCEEEEEcC--CChhHHHHHHHHhhcCCCeEEEEecCCc-----------cc---c-ccCC----CeEEEEecC----
Q 042242 26 DAKNVAVIFGV--TGLVGKELARRLISTANWKVYGIARKPE-----------IT---A-IQSS----SYCFISCDL---- 80 (303)
Q Consensus 26 ~~~~~vlVtGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~-----------~~---~-~~~~----~~~~~~~D~---- 80 (303)
+++|+++|||| +|+||++++++|+ +.|++|++++|++. .. . .... ...++.+|+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la-~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLA-SAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK 85 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHH-TTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHH-HCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence 34689999999 8999999999999 68999999986420 00 0 0001 024444443
Q ss_pred --------CC--------HHHHHHHHh-------ccCceeEEeecc------cccCChHHHHHHHHHHHHHHHHHHHHHh
Q 042242 81 --------LN--------PLDIKRKLT-------LLEDVTHIFWVT------WASQFASDMHKCCEQNKAMMCNALNAIL 131 (303)
Q Consensus 81 --------~~--------~~~l~~~~~-------~~~~V~~~~~~~------~~~~~~~~~~~~~~~n~~~~~~ll~~~~ 131 (303)
+| .++++++++ .+|.++|.++.. ....+..+..+.+++|+.++..+++++.
T Consensus 86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 165 (315)
T 2o2s_A 86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG 165 (315)
T ss_dssp TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 22 334444443 456678876532 1223345555689999999999999987
Q ss_pred hccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh--cCCcceEEecC
Q 042242 132 PRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL--AGKVAWSVHRP 200 (303)
Q Consensus 132 ~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~--~~~~~~~ilRp 200 (303)
....+-.+++.+++...+... +.. ..+ |+.+|...+ +. .+ +++..++|
T Consensus 166 ~~m~~~g~Iv~isS~~~~~~~----------------~~~-~~~---Y~asKaal~~l~~~la~el~~~~g-Irvn~v~P 224 (315)
T 2o2s_A 166 PIMNEGGSAVTLSYLAAERVV----------------PGY-GGG---MSSAKAALESDTRTLAWEAGQKYG-VRVNAISA 224 (315)
T ss_dssp TTEEEEEEEEEEEEGGGTSCC----------------TTC-CTT---HHHHHHHHHHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHhcCCEEEEEecccccccC----------------CCc-cHH---HHHHHHHHHHHHHHHHHHhCcccC-eEEEEEec
Confidence 652111244444432221000 000 013 777665443 22 24 99999999
Q ss_pred CceeecCCCCccc-hhhHH-HHHH-HHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEe
Q 042242 201 GLLLGSSHRSLYN-FLGCL-CVYG-AVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNA 277 (303)
Q Consensus 201 ~~v~G~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni 277 (303)
|.|..+....... ..... .... .+.. ..| +..+.+++++|.++++++...... ..|+.+.+
T Consensus 225 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~p-------------~~r~~~pedvA~~v~~L~s~~~~~-itG~~i~v 288 (315)
T 2o2s_A 225 GPLKSRAASAIGKSGEKSFIDYAIDYSYN--NAP-------------LRRDLHSDDVGGAALFLLSPLARA-VSGVTLYV 288 (315)
T ss_dssp CCCCCHHHHHTTCSSSSCHHHHHHHHHHH--HSS-------------SCCCCCHHHHHHHHHHHTSGGGTT-CCSCEEEE
T ss_pred ccccchhhhhccccccchhHHHHHHHHhc--cCC-------------CCCCCCHHHHHHHHHHHhCchhcc-CcCCEEEE
Confidence 9887631000000 00000 0000 0000 011 112457889999999988643321 34688888
Q ss_pred ecCC
Q 042242 278 INGP 281 (303)
Q Consensus 278 ~~~~ 281 (303)
.++.
T Consensus 289 dGG~ 292 (315)
T 2o2s_A 289 DNGL 292 (315)
T ss_dssp STTG
T ss_pred CCCe
Confidence 7774
No 305
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.00 E-value=1.7e-09 Score=103.76 Aligned_cols=165 Identities=18% Similarity=0.222 Sum_probs=110.0
Q ss_pred cccccCCcCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCcccc--------c--cCCCeEEEEecCCCH
Q 042242 15 NKVSVNRGREVDAKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITA--------I--QSSSYCFISCDLLNP 83 (303)
Q Consensus 15 ~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~--------~--~~~~~~~~~~D~~~~ 83 (303)
+|+.........++++++||||+|.||+.++++|.++.|.+ |++++|+..... + ...++.++.+|++|.
T Consensus 517 GKvVl~~~~~~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~ 596 (795)
T 3slk_A 517 GKLVLTMPPVWDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADR 596 (795)
T ss_dssp BEEEEECCCCCCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred ceEEEecCcccccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCH
Confidence 34444433334467899999999999999999997347885 999999843321 1 123578899999999
Q ss_pred HHHHHHHhcc------CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccccccccc
Q 042242 84 LDIKRKLTLL------EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQ 153 (303)
Q Consensus 84 ~~l~~~~~~~------~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~ 153 (303)
++++++++.+ |.++|.|+... ...+.++....++.|+.++.++.+++... + +|+.+||...+.+..
T Consensus 597 ~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~---l-~iV~~SS~ag~~g~~ 672 (795)
T 3slk_A 597 ETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD---V-ALVLFSSVSGVLGSG 672 (795)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT---S-EEEEEEETHHHHTCS
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC---C-EEEEEccHHhcCCCC
Confidence 9999998765 34777765432 23344555568999999999999987432 3 555555432321110
Q ss_pred CCCcccccCCcCcCCCCCCCCccchHHHHHHHHH-----H-hcCCcceEEecCCceee
Q 042242 154 GLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE-----K-LAGKVAWSVHRPGLLLG 205 (303)
Q Consensus 154 ~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~-~~~~~~~~ilRp~~v~G 205 (303)
. ... |+.+|.+.+ + ..+ ++++.+.||.+-.
T Consensus 673 g------------------~~~---YaAaka~~~alA~~~~~~G-i~v~sI~pG~v~t 708 (795)
T 3slk_A 673 G------------------QGN---YAAANSFLDALAQQRQSRG-LPTRSLAWGPWAE 708 (795)
T ss_dssp S------------------CHH---HHHHHHHHHHHHHHHHHTT-CCEEEEEECCCSC
T ss_pred C------------------CHH---HHHHHHHHHHHHHHHHHcC-CeEEEEECCeECc
Confidence 0 122 777665544 1 234 9999999988765
No 306
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.99 E-value=6.1e-10 Score=81.01 Aligned_cols=72 Identities=15% Similarity=0.164 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
|+++|+|+|+ |++|+.+++.|+ ..| ++|++++|++.+.. ....++.++.+|+.+.+.+.+.++++|.|++++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~-~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLK-TSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHH-HCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred CcCeEEEECC-CHHHHHHHHHHH-hCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 4579999999 999999999999 567 99999999876543 234678889999999999999999988888875
No 307
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=98.95 E-value=3.4e-08 Score=91.97 Aligned_cols=219 Identities=15% Similarity=0.048 Sum_probs=128.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---c--cCCCeEEEEecC-CCHHHH-HHH---HhccCc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---I--QSSSYCFISCDL-LNPLDI-KRK---LTLLED 95 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~--~~~~~~~~~~D~-~~~~~l-~~~---~~~~~~ 95 (303)
+++|+++||||++.||+.+++.|+ +.|++|++.+|+..... . ....+..+.+|+ .+.+.+ +++ +..+|.
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la-~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi 398 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFA-KYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI 398 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHH-HTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCeEEEECcchHHHHHHHHHHH-HCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence 456899999999999999999999 68999999887433211 1 122355667788 554433 223 234566
Q ss_pred eeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
++|.|+... ...+..+....+++|+.++..+.+++.... .+--+++.+++...+.+. +
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~----------~------ 462 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN----------F------ 462 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC----------T------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC----------C------
Confidence 777766432 233445556689999999999988876641 222345555442221010 0
Q ss_pred CCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 170 RVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
. ... |+.+|.... .. .+ +++..+.|+. . +... ... . ...
T Consensus 463 ~--~~~---Y~asKaal~~lt~~la~El~~~g-IrVn~v~PG~--~--T~m~----~~~-----~----~~~-------- 511 (604)
T 2et6_A 463 G--QAN---YSSSKAGILGLSKTMAIEGAKNN-IKVNIVAPHA--E--TAMT----LSI-----M----REQ-------- 511 (604)
T ss_dssp T--BHH---HHHHHHHHHHHHHHHHHHHGGGT-EEEEEEEECC--C--CCC-----------------------------
T ss_pred C--Chh---HHHHHHHHHHHHHHHHHHhCccC-eEEEEEcCCC--C--Cccc----ccc-----C----chh--------
Confidence 0 112 777665443 22 23 9999999973 2 1111 000 0 000
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC-----------------CCccHHhhHHHHHHHhccc
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING-----------------PRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~-----------------~~~s~~e~~~~i~~~~g~~ 299 (303)
.......+++|.++++++..... ..|+.+.+.++ ...+..++.+.+.+.....
T Consensus 512 -----~~~~~~pe~vA~~v~~L~s~~~~--itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 581 (604)
T 2et6_A 512 -----DKNLYHADQVAPLLVYLGTDDVP--VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT 581 (604)
T ss_dssp ------CCSSCGGGTHHHHHHTTSTTCC--CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred -----hccCCCHHHHHHHHHHHhCCccC--CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence 00123567788888887654332 34577777654 2357788888777766554
No 308
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=98.90 E-value=6.6e-08 Score=85.53 Aligned_cols=76 Identities=8% Similarity=0.027 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCChhHHH--HHHHHhhcCCCeEEEEecCCcccc-------------------ccCCCeEEEEecCCCHH
Q 042242 26 DAKNVAVIFGVTGLVGKE--LARRLISTANWKVYGIARKPEITA-------------------IQSSSYCFISCDLLNPL 84 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~--l~~~L~~~~g~~V~~~~r~~~~~~-------------------~~~~~~~~~~~D~~~~~ 84 (303)
..+|++|||||++.||.+ ++..|. ..|++|++++|+..... .....+..+.+|++|.+
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala-~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~ 136 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFG-GPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE 136 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHS-SSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHH-hCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence 467899999999999999 999997 67999999998654310 11235778899999999
Q ss_pred HHHHHHhc-------cCceeEEeec
Q 042242 85 DIKRKLTL-------LEDVTHIFWV 102 (303)
Q Consensus 85 ~l~~~~~~-------~~~V~~~~~~ 102 (303)
+++++++. +|.++|.++.
T Consensus 137 ~v~~~v~~i~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 137 TKDKVIKYIKDEFGKIDLFVYSLAA 161 (418)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcc
Confidence 88777654 3445665543
No 309
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=98.90 E-value=6.4e-08 Score=85.13 Aligned_cols=64 Identities=11% Similarity=-0.010 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCcccc-------------------ccCCCeEEEEecCCCHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEITA-------------------IQSSSYCFISCDLLNPLDI 86 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~-------------------~~~~~~~~~~~D~~~~~~l 86 (303)
.+|++|||||++.||+++++.|. . .|++|++++|+..... .....+..+.+|++|.+++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA-~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAA-FGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHH-HHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHH-HhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence 47899999999999999999999 6 7999999998754321 0123467889999999887
Q ss_pred HHHHh
Q 042242 87 KRKLT 91 (303)
Q Consensus 87 ~~~~~ 91 (303)
+++++
T Consensus 139 ~~~v~ 143 (422)
T 3s8m_A 139 AQVIE 143 (422)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 310
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=98.86 E-value=4.1e-08 Score=99.84 Aligned_cols=156 Identities=13% Similarity=0.049 Sum_probs=102.8
Q ss_pred CCCCEEEEEcCCCh-hHHHHHHHHhhcCCCeEEEEe-cCCcccc-----c----c--CCCeEEEEecCCCHHHHHHHHh-
Q 042242 26 DAKNVAVIFGVTGL-VGKELARRLISTANWKVYGIA-RKPEITA-----I----Q--SSSYCFISCDLLNPLDIKRKLT- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~-iG~~l~~~L~~~~g~~V~~~~-r~~~~~~-----~----~--~~~~~~~~~D~~~~~~l~~~~~- 91 (303)
+++|++|||||+|. ||.++++.|+ ..|++|++++ |+..... . . ..++.++.+|++|.+++.++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La-~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLL-QGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 45689999999998 9999999999 6899999985 5443321 0 0 2357889999999998887764
Q ss_pred ------------ccCceeEEeeccccc-----CC--hHHHHHHHHHHHHHHHHHHHHHhhc---c-CCccEEEEeecccc
Q 042242 92 ------------LLEDVTHIFWVTWAS-----QF--ASDMHKCCEQNKAMMCNALNAILPR---A-KALKHVSLQTGMKH 148 (303)
Q Consensus 92 ------------~~~~V~~~~~~~~~~-----~~--~~~~~~~~~~n~~~~~~ll~~~~~~---~-~~~~~~~~~s~~~~ 148 (303)
.+|.+||.|+..... .. .......+++|+.++..++++++.. . .+-.+++.+|+...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 245688887653222 12 3444568999999999999887422 1 11235555544222
Q ss_pred cccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHHH------hc--CC-cceEEecCCceee
Q 042242 149 YVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKEK------LA--GK-VAWSVHRPGLLLG 205 (303)
Q Consensus 149 y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e~------~~--~~-~~~~ilRp~~v~G 205 (303)
+. + .... |+.+|...+. .. .. ++++.+.||.+.+
T Consensus 832 ~~------------g--------g~~a---YaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 832 TF------------G--------GDGM---YSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp CS------------S--------CBTT---HHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred cc------------C--------CCch---HHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 10 0 0123 7877754431 11 12 8899999999984
No 311
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=98.86 E-value=3e-08 Score=100.68 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=76.5
Q ss_pred CCCCEEEEEcCCCh-hHHHHHHHHhhcCCCeEEEEecC-Ccccc---------cc--CCCeEEEEecCCCHHHHHHHHh-
Q 042242 26 DAKNVAVIFGVTGL-VGKELARRLISTANWKVYGIARK-PEITA---------IQ--SSSYCFISCDLLNPLDIKRKLT- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~-iG~~l~~~L~~~~g~~V~~~~r~-~~~~~---------~~--~~~~~~~~~D~~~~~~l~~~~~- 91 (303)
+++|+||||||+|. ||.++++.|+ ..|++|++++++ ..... .. ..++.++.+|++|.+++.++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA-~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLL-SGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 45689999999999 9999999999 689999998644 33211 01 2357889999999998888775
Q ss_pred ----------ccCceeEEeeccccc-----CC--hHHHHHHHHHHHHHHHHHHHHH
Q 042242 92 ----------LLEDVTHIFWVTWAS-----QF--ASDMHKCCEQNKAMMCNALNAI 130 (303)
Q Consensus 92 ----------~~~~V~~~~~~~~~~-----~~--~~~~~~~~~~n~~~~~~ll~~~ 130 (303)
.+|.+||.|+..... .. .......+++|+.++..++..+
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~ 784 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQ 784 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 245688887653221 22 3445568999999999888764
No 312
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=98.84 E-value=7e-08 Score=84.18 Aligned_cols=76 Identities=8% Similarity=-0.031 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCcccc-------------------ccCCCeEEEEecCCCHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEITA-------------------IQSSSYCFISCDLLNPLD 85 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~-------------------~~~~~~~~~~~D~~~~~~ 85 (303)
..+|++|||||++.||.++++.|+ . .|++|++++|+..... .....+..+.+|++|.++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA-~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~ 123 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAA-FGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI 123 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHH-HHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHH-HhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 357899999999999999999999 6 7999999988654311 012356788999999998
Q ss_pred HHHHHhc-------cCceeEEeec
Q 042242 86 IKRKLTL-------LEDVTHIFWV 102 (303)
Q Consensus 86 l~~~~~~-------~~~V~~~~~~ 102 (303)
++++++. +|.++|.++.
T Consensus 124 v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 124 KQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp HHHHHHHHHHHTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEEcCcc
Confidence 8777654 3445665543
No 313
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=98.83 E-value=1.6e-08 Score=99.94 Aligned_cols=105 Identities=14% Similarity=0.095 Sum_probs=76.9
Q ss_pred CCCCEEEEEcCCCh-hHHHHHHHHhhcCCCeEEEEe-cCCcccc-----c--c----CCCeEEEEecCCCHHHHHHHHh-
Q 042242 26 DAKNVAVIFGVTGL-VGKELARRLISTANWKVYGIA-RKPEITA-----I--Q----SSSYCFISCDLLNPLDIKRKLT- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~-iG~~l~~~L~~~~g~~V~~~~-r~~~~~~-----~--~----~~~~~~~~~D~~~~~~l~~~~~- 91 (303)
+++|++|||||+|. ||+++++.|+ ..|++|++++ |+..... . . ..++.++.+|++|.++++++++
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA-~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~ 552 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLL-QGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 552 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHH-HHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHH-HCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 45689999999998 9999999999 6899999884 5443321 1 0 1247788999999998887764
Q ss_pred ------------ccCceeEEeeccccc-----CC--hHHHHHHHHHHHHHHHHHHHHHh
Q 042242 92 ------------LLEDVTHIFWVTWAS-----QF--ASDMHKCCEQNKAMMCNALNAIL 131 (303)
Q Consensus 92 ------------~~~~V~~~~~~~~~~-----~~--~~~~~~~~~~n~~~~~~ll~~~~ 131 (303)
.+|.++|.|+..... .. .......+++|+.++..++++++
T Consensus 553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~ 611 (1688)
T 2pff_A 553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQK 611 (1688)
T ss_dssp HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 245678887653222 12 34455688999999999988873
No 314
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=98.81 E-value=1.5e-07 Score=87.75 Aligned_cols=106 Identities=15% Similarity=0.045 Sum_probs=69.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC---------cccc-----ccCCCeEEEEecCCCHHHHHHH--
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP---------EITA-----IQSSSYCFISCDLLNPLDIKRK-- 89 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~---------~~~~-----~~~~~~~~~~~D~~~~~~l~~~-- 89 (303)
+++|+++||||++.||+.+++.|+ ..|++|++.+|+. .... ....+.. ..+|+.|.++++++
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la-~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~ 83 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFA-KLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVE 83 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHH
Confidence 456899999999999999999999 6899999998764 1111 1111222 23566665433332
Q ss_pred -----HhccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 90 -----LTLLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 90 -----~~~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+..+|.++|.|+... ...+..+....+++|+.++..+.+++...
T Consensus 84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~ 136 (604)
T 2et6_A 84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPY 136 (604)
T ss_dssp HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 234566777766422 23344555668999999999998887654
No 315
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.77 E-value=2.1e-08 Score=86.28 Aligned_cols=107 Identities=12% Similarity=0.035 Sum_probs=74.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc---ccCCCeE-EEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA---IQSSSYC-FISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~---~~~~~~~-~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
+++||+|+||+|++|+.++..|+ ..+ ++|+++++++.... +...... .+.+ +.+..++.++++++|.|+|++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~-~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~a 84 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMK-MNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPA 84 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHH-HCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHH-hCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcC
Confidence 45699999999999999999998 467 78999998765211 1111111 1122 233556788999999999997
Q ss_pred ecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 042242 101 WVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKAL 137 (303)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~ 137 (303)
+......... .++...|+.++.++++++.+.++..
T Consensus 85 g~~~~~g~~r--~dl~~~N~~~~~~i~~~i~~~~p~~ 119 (326)
T 1smk_A 85 GVPRKPGMTR--DDLFKINAGIVKTLCEGIAKCCPRA 119 (326)
T ss_dssp CCCCCSSCCC--SHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CcCCCCCCCH--HHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 7543222222 2378999999999999999886543
No 316
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.67 E-value=1.9e-08 Score=86.68 Aligned_cols=105 Identities=10% Similarity=0.033 Sum_probs=74.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-------eEEEEecC----Ccccc-----ccCCCeEEEEecCCCHHHHHHHHh
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-------KVYGIARK----PEITA-----IQSSSYCFISCDLLNPLDIKRKLT 91 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~----~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~ 91 (303)
.+||+||||+|+||++++..|+ ..++ +|+++++. +.+.. +......+ ..|+....++.++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~-~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIA-NGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK 82 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHH-TTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHH-hCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence 4689999999999999999998 5664 79999887 32111 11110111 135544456778999
Q ss_pred ccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CC
Q 042242 92 LLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA-KA 136 (303)
Q Consensus 92 ~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~ 136 (303)
++|.|+|+++..... ..+..+++..|+..+.++++++.+.+ +.
T Consensus 83 ~aD~Vi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~p~ 126 (329)
T 1b8p_A 83 DADVALLVGARPRGP--GMERKDLLEANAQIFTVQGKAIDAVASRN 126 (329)
T ss_dssp TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred CCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999997754322 22333488999999999999999885 54
No 317
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=98.56 E-value=4.7e-08 Score=82.73 Aligned_cols=76 Identities=16% Similarity=0.006 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc------cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI------QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.++++++||||+|.+|++++..|+ ..|++|++++|+..+... ...++.++.+|+++.+++.+.++.+|.|+|+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~-~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ 195 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLA-GEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 195 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence 457899999999999999999999 678999999998654321 0124667889999999999999999888888
Q ss_pred eec
Q 042242 100 FWV 102 (303)
Q Consensus 100 ~~~ 102 (303)
++.
T Consensus 196 ag~ 198 (287)
T 1lu9_A 196 GAI 198 (287)
T ss_dssp CCT
T ss_pred CCc
Confidence 754
No 318
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.47 E-value=5e-07 Score=96.11 Aligned_cols=119 Identities=14% Similarity=0.035 Sum_probs=81.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCcccc--------c--cCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITA--------I--QSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~--------~--~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
.+|+++||||+|.||+.++++|. +.|++ |++++|+..+.. . ...++.++.+|++|.++++++++.
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la-~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLR-LRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-HTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHH-HCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 46899999999999999999999 67887 888888765421 1 123567788999999988877754
Q ss_pred ---cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecc
Q 042242 93 ---LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGM 146 (303)
Q Consensus 93 ---~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~ 146 (303)
+|.++|.|+... ...+..+....++.|+.++.++.+++....+...+|+.+|+.
T Consensus 1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ 2022 (2512)
T 2vz8_A 1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSV 2022 (2512)
T ss_dssp HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecch
Confidence 345777766422 112233334478899999999988887654444566666653
No 319
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=98.45 E-value=5.1e-07 Score=77.21 Aligned_cols=99 Identities=16% Similarity=0.047 Sum_probs=67.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEec--CCcccc-----c-----cC-CCeEEEEecCCCHHHHHHHHhcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIAR--KPEITA-----I-----QS-SSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r--~~~~~~-----~-----~~-~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
+||+||||+|++|++++..|+ ..++ ++.++++ .+.+.. + .. ..+.+...+ +++.++++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~-~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~ga 75 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLA-KEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDES 75 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-TCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTC
T ss_pred CEEEEECCCChhHHHHHHHHH-hCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCC
Confidence 389999999999999999998 4554 5888887 432110 0 00 122332211 1245678999
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA 134 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~ 134 (303)
|.|+|+++.... ......+++..|+..+.++++++++.+
T Consensus 76 D~Vi~~Ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~ 114 (313)
T 1hye_A 76 DVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEIC 114 (313)
T ss_dssp SEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999875432 222333479999999999999999886
No 320
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.41 E-value=5.3e-07 Score=80.92 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=72.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc---cCCCeEEEEecCCCHHHHHHHHhccCceeEEeecc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI---QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVT 103 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~ 103 (303)
++++|+|+| +|++|+++++.|+ ..|++|++.+|++.+... ...++..+.+|+.|.+++.++++++|.|+|++...
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~-~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLT-DSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHH-TTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-hCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 357999998 8999999999999 688999999998765431 12347788899999999999999888888886542
Q ss_pred cccCChHHHHHHHHH--H-------HHHHHHHHHHHhhcc
Q 042242 104 WASQFASDMHKCCEQ--N-------KAMMCNALNAILPRA 134 (303)
Q Consensus 104 ~~~~~~~~~~~~~~~--n-------~~~~~~ll~~~~~~~ 134 (303)
... .-....++. + .....++++++++.+
T Consensus 80 ~~~---~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG 116 (450)
T 1ff9_A 80 FHA---TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG 116 (450)
T ss_dssp CHH---HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred cch---HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence 211 111112221 2 235677888888764
No 321
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.41 E-value=2e-07 Score=69.99 Aligned_cols=69 Identities=17% Similarity=0.203 Sum_probs=53.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH-HhccCceeE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK-LTLLEDVTH 98 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~~ 98 (303)
+++|+|+|+ |.+|+.+++.|. ..|++|+++++++.... ....++.++.+|.++++.+.++ ++++|.|+.
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~-~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELT-AAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHH-HCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 468999996 999999999998 68999999999876543 2235788899999999888765 344553443
No 322
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=98.40 E-value=8.9e-07 Score=71.54 Aligned_cols=74 Identities=18% Similarity=0.267 Sum_probs=52.4
Q ss_pred CCCEEEEEcC----------------CChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHH----
Q 042242 27 AKNVAVIFGV----------------TGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDI---- 86 (303)
Q Consensus 27 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l---- 86 (303)
.+|+|||||| ||.+|.+++++++ ..|++|+++.|+.........++.++ |+...+.+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~-~~Ga~V~lv~~~~~~~~~~~~~~~~~--~v~s~~em~~~v 78 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLL-SAGYEVCLITTKRALKPEPHPNLSIR--EITNTKDLLIEM 78 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHH-HTTCEEEEEECTTSCCCCCCTTEEEE--ECCSHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHH-HCCCEEEEEeCCccccccCCCCeEEE--EHhHHHHHHHHH
Confidence 4689999999 9999999999999 68999999999764322112355554 55555433
Q ss_pred HHHHhccCceeEEeecc
Q 042242 87 KRKLTLLEDVTHIFWVT 103 (303)
Q Consensus 87 ~~~~~~~~~V~~~~~~~ 103 (303)
.+.+..+|.+++.|+.+
T Consensus 79 ~~~~~~~Dili~aAAvs 95 (232)
T 2gk4_A 79 QERVQDYQVLIHSMAVS 95 (232)
T ss_dssp HHHGGGCSEEEECSBCC
T ss_pred HHhcCCCCEEEEcCccc
Confidence 44455677788876654
No 323
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.40 E-value=1e-07 Score=81.08 Aligned_cols=100 Identities=11% Similarity=0.022 Sum_probs=67.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEec--CCcccc-----c-----cCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIAR--KPEITA-----I-----QSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r--~~~~~~-----~-----~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
+||+||||+|++|++++..|+ ..++ ++.++++ .+.+.. . ...++.+.. + + .+.++++|
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~-~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD 72 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIA-LRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSD 72 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCC
Confidence 489999999999999999998 4454 6888887 432211 0 012223322 1 1 34688899
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
.|+|+++....... ...+++..|+..+.++++++.+.++...
T Consensus 73 vVi~~ag~~~~~g~--~r~dl~~~N~~i~~~i~~~i~~~~p~~~ 114 (303)
T 1o6z_A 73 VVVITAGIPRQPGQ--TRIDLAGDNAPIMEDIQSSLDEHNDDYI 114 (303)
T ss_dssp EEEECCCCCCCTTC--CHHHHHHHHHHHHHHHHHHHHTTCSCCE
T ss_pred EEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHCCCcE
Confidence 89999765432222 2334789999999999999998865433
No 324
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.39 E-value=3.3e-07 Score=68.75 Aligned_cols=72 Identities=13% Similarity=0.151 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH-HhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK-LTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~~~~ 100 (303)
++++|+|+|+ |.+|+.+++.|. ..|++|++++|++.... ....+..++.+|..+.+.+.++ +.++|.|+++.
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~-~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELH-RMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHH-HTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred cCCcEEEECC-CHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence 3468999997 999999999998 67899999999865433 2233567788999998877765 67777666653
No 325
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.37 E-value=7.7e-07 Score=67.77 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc-c---c-ccCCCeEEEEecCCCHHHHHHH-HhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI-T---A-IQSSSYCFISCDLLNPLDIKRK-LTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~---~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~~~ 99 (303)
+.++|+|+|+ |.+|+.+++.|. ..|++|++++|++.. . . ....++.++.+|.++++.+.++ +++++.|+.+
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~-~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLN-QRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHH-HTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCCcEEEECC-CHHHHHHHHHHH-HCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 4578999995 999999999998 689999999997531 1 1 1235789999999999988876 7777744444
No 326
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.34 E-value=7.7e-07 Score=77.85 Aligned_cols=71 Identities=18% Similarity=0.114 Sum_probs=59.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
.+||+|+|| |++|+.+++.|. ..++|++.+|+..+.....+.+..+.+|+.|.+++.+.++++|.|++++.
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~--~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p 86 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLK--DEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHT--TTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred ccEEEEECC-CHHHHHHHHHHh--cCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecC
Confidence 468999997 999999999986 46899999998765443455677889999999999999999998888754
No 327
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.28 E-value=2.7e-06 Score=64.89 Aligned_cols=71 Identities=17% Similarity=0.107 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-c-CCCeEEEEecCCCHHHHHHH-HhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-Q-SSSYCFISCDLLNPLDIKRK-LTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~-~~~~~~~~~D~~~~~~l~~~-~~~~~~V~~~ 99 (303)
..++|+|+|+ |.+|+.+++.|. ..|++|++++|++..... . ..++.++.+|..+.+.+.++ ++++|.|+.+
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~-~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLAS-SSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-HTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred CCCcEEEECC-CHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 4579999995 999999999998 688999999998766442 2 34677888999888777655 6667655544
No 328
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.24 E-value=1.2e-06 Score=78.77 Aligned_cols=75 Identities=16% Similarity=0.155 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
++++|+|+|+ |++|+.++..|++..+++|++++|++.+.. ....++.++.+|+.|.+++.++++++|.|++++..
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 4579999997 999999999999444889999999876542 11135777889999999999999999988888553
No 329
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.19 E-value=1.3e-06 Score=65.05 Aligned_cols=70 Identities=17% Similarity=0.162 Sum_probs=53.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-cc-CCCeEEEEecCCCHHHHHHH-HhccCceeEE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQ-SSSYCFISCDLLNPLDIKRK-LTLLEDVTHI 99 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~-~~~~~~~~~D~~~~~~l~~~-~~~~~~V~~~ 99 (303)
.++|+|+|+ |++|+.+++.|. ..|++|++++|++.... .. ..++.++.+|..+.+.+.+. ++++|.|+++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~-~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLS-EKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 368999996 999999999998 57899999999865432 11 23677788999988877654 5667756665
No 330
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.15 E-value=2.8e-06 Score=63.60 Aligned_cols=69 Identities=16% Similarity=0.145 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH-HhccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK-LTLLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~ 97 (303)
+.++|+|+| .|.+|+.+++.|. ..|++|+++++++.... ....++.++.+|.++.+.++++ ++.+|.|+
T Consensus 6 ~~~~viIiG-~G~~G~~la~~L~-~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 6 ICNHALLVG-YGRVGSLLGEKLL-ASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CCSCEEEEC-CSHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCCEEEEC-cCHHHHHHHHHHH-HCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 557899999 5999999999998 68999999999987643 2336888999999999887764 45555333
No 331
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.11 E-value=8.4e-06 Score=69.60 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=71.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc---ccCCCeEEEEecCCC---HHHHHHHHhccCceeEEe
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA---IQSSSYCFISCDLLN---PLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~---~~~l~~~~~~~~~V~~~~ 100 (303)
+||.|+||+|++|+.++..|+ ..+ .+|.++++++.... +.+.... +++.. ..+++++++++|.|++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~-~~~~~~ev~L~Di~~~~~~a~dL~~~~~~---~~l~~~~~t~d~~~a~~~aDvVvi~a 76 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLK-NSPLVSRLTLYDIAHTPGVAADLSHIETR---ATVKGYLGPEQLPDCLKGCDVVVIPA 76 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHH-TCTTCSEEEEEESSSHHHHHHHHTTSSSS---CEEEEEESGGGHHHHHTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCCcEEEEEeCCccHHHHHHHhccCcC---ceEEEecCCCCHHHHhCCCCEEEECC
Confidence 389999999999999999998 566 68999999872211 1111000 11111 134667899999888887
Q ss_pred ecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 101 WVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
+....... ...+.+..|...+..+++.+.+.++....+
T Consensus 77 g~~~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi 114 (314)
T 1mld_A 77 GVPRKPGM--TRDDLFNTNATIVATLTAACAQHCPDAMIC 114 (314)
T ss_dssp SCCCCTTC--CGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CcCCCCCC--cHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 65432221 222368999999999999999887654343
No 332
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.07 E-value=3.7e-06 Score=74.51 Aligned_cols=71 Identities=13% Similarity=0.050 Sum_probs=57.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC---CeEEEEecCCccccc-----c---CCCeEEEEecCCCHHHHHHHHhc--cCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN---WKVYGIARKPEITAI-----Q---SSSYCFISCDLLNPLDIKRKLTL--LED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~-----~---~~~~~~~~~D~~~~~~l~~~~~~--~~~ 95 (303)
++|+|+|| |+||+.+++.|+ ..+ .+|++.+|+..+... . ..++..+.+|+.|.+++.++++. +|.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~-~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMA-MNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-TCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 68999998 999999999998 455 389999998765421 1 13588899999999999999998 677
Q ss_pred eeEEee
Q 042242 96 VTHIFW 101 (303)
Q Consensus 96 V~~~~~ 101 (303)
|+|++.
T Consensus 80 Vin~ag 85 (405)
T 4ina_A 80 VLNIAL 85 (405)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 888854
No 333
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=98.07 E-value=1.4e-06 Score=74.82 Aligned_cols=107 Identities=12% Similarity=0.021 Sum_probs=70.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC--e-----EEEEecCCc--ccc-----cc---CCCeEEEEecCCCHHHHHHHH
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW--K-----VYGIARKPE--ITA-----IQ---SSSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~--~-----V~~~~r~~~--~~~-----~~---~~~~~~~~~D~~~~~~l~~~~ 90 (303)
.+||+||||+|+||++++..|+ ..+. + +.++++.+. ... +. .+-.. ++.-.....+.+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~-~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~ 77 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIG-NGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAF 77 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHH-TTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHT
T ss_pred CeEEEEECCCCHHHHHHHHHHH-hCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHh
Confidence 4689999999999999999998 4544 4 888888642 110 11 11111 111122355789
Q ss_pred hccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 91 TLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 91 ~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
+++|.|+++++..- ....+..+.++.|+..+.++++++.+.+++-.+++
T Consensus 78 ~daDvVvitAg~pr--kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vi 126 (333)
T 5mdh_A 78 KDLDVAILVGSMPR--RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVI 126 (333)
T ss_dssp TTCSEEEECCSCCC--CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred CCCCEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 99998888865432 22223334799999999999999999876543333
No 334
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=98.04 E-value=2.5e-05 Score=62.88 Aligned_cols=73 Identities=11% Similarity=0.027 Sum_probs=52.9
Q ss_pred CCCCEEEEEcC----------------CChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHH
Q 042242 26 DAKNVAVIFGV----------------TGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRK 89 (303)
Q Consensus 26 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~ 89 (303)
+.+|+|||||| ||.+|.+++++|+ ..|++|++++|+..- .. ..++. .+|+.+.+++.+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~-~~Ga~V~l~~~~~~l-~~-~~g~~--~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAA-RRGANVTLVSGPVSL-PT-PPFVK--RVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHH-HTTCEEEEEECSCCC-CC-CTTEE--EEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHH-HCCCEEEEEECCccc-cc-CCCCe--EEccCcHHHHHHH
Confidence 46799999999 6999999999999 689999999886521 11 22343 4688887655443
Q ss_pred ----HhccCceeEEeecc
Q 042242 90 ----LTLLEDVTHIFWVT 103 (303)
Q Consensus 90 ----~~~~~~V~~~~~~~ 103 (303)
+..+|.+++.|+.+
T Consensus 81 v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 81 VNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHGGGCSEEEECCBCC
T ss_pred HHHhcCCCCEEEECCccc
Confidence 34567677776653
No 335
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.99 E-value=0.00015 Score=77.91 Aligned_cols=107 Identities=7% Similarity=0.028 Sum_probs=73.5
Q ss_pred CCCCEEEEEcCCCh-hHHHHHHHHhhcCCCeEEEEecCCcc-----cc-----cc--CCCeEEEEecCCCHHHHHHHHhc
Q 042242 26 DAKNVAVIFGVTGL-VGKELARRLISTANWKVYGIARKPEI-----TA-----IQ--SSSYCFISCDLLNPLDIKRKLTL 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~-iG~~l~~~L~~~~g~~V~~~~r~~~~-----~~-----~~--~~~~~~~~~D~~~~~~l~~~~~~ 92 (303)
+.+|++|||||++. ||..+++.|+ ..|++|++++|+... .. .. ...+..+.+|++|.++++++++.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La-~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLL-DGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHH-HTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHH-HCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 56899999999999 9999999999 689999999998765 11 11 12466789999999988877643
Q ss_pred c-----------CceeEEeec-----cc---c---cCChH--HHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 L-----------EDVTHIFWV-----TW---A---SQFAS--DMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 ~-----------~~V~~~~~~-----~~---~---~~~~~--~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+ |.++|.|+. .. . ....+ ..+..+++|+.++..++..+...
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~ 2277 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKI 2277 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 334444443 00 0 00111 11234788888888887776653
No 336
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.93 E-value=4e-06 Score=72.22 Aligned_cols=104 Identities=14% Similarity=0.059 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc-----cc---CCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA-----IQ---SSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~-----~~---~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
+++||.|+|++|++|+.++..|+ ..| .+|.++++.+.+.. +. .+.. ++.-.....+.++++|.|
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~-~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~-----~i~~t~d~~~al~dADvV 80 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAA-MMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGL-----NLTFTSDIKEALTDAKYI 80 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHH-HTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTC-----CCEEESCHHHHHTTEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHH-hcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCC-----ceEEcCCHHHHhCCCCEE
Confidence 45799999999999999999888 455 47999998765321 10 1111 111112355688999977
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
+.+++.+ .....+..+.+..|......+.+.+.+.++.-+
T Consensus 81 vitaG~p--~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 81 VSSGGAP--RKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp EECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred EEccCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 7776543 222333445899999999999999998876654
No 337
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.91 E-value=7.4e-06 Score=66.13 Aligned_cols=67 Identities=16% Similarity=0.139 Sum_probs=53.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHH-HhccCcee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRK-LTLLEDVT 97 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~ 97 (303)
++|+|+|+ |.+|+.+++.|. ..|++|+++++++..... ...++.++.+|.++.+.++++ ++.+|.|+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~-~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSML-SRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 47999995 999999999998 689999999998765431 224788999999999988876 56666444
No 338
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.91 E-value=5.3e-06 Score=65.02 Aligned_cols=72 Identities=21% Similarity=0.159 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH--HhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK--LTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~--~~~~~~V~~~ 99 (303)
..+++|+|+| .|.+|..+++.|. .. |++|++++|++.+.. ....++.++.+|..+.+.+.++ ++++|.|+.+
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~-~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELR-ARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHH-HHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHH-hccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 3456899999 6999999999998 67 899999999876543 2234677888999998877765 5666644443
No 339
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.90 E-value=2.1e-05 Score=68.51 Aligned_cols=70 Identities=19% Similarity=0.124 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.+++|+|+|+ |++|+.+++.|. .. ++|++.+|++++..........+.+|+.+.+++.++++++|.|+++
T Consensus 15 ~~~~v~IiGa-G~iG~~ia~~L~-~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~ 84 (365)
T 2z2v_A 15 RHMKVLILGA-GNIGRAIAWDLK-DE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHT-TT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEEC
T ss_pred CCCeEEEEcC-CHHHHHHHHHHH-cC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEEC
Confidence 4679999995 999999999998 45 8999999998765433344566778999999999999999988887
No 340
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.82 E-value=1.2e-05 Score=65.73 Aligned_cols=69 Identities=16% Similarity=0.049 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH-HhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK-LTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~~~ 99 (303)
..++|+|+|+ |.+|+.+++.|. ..|+ |++++|++.... .. .++.++.+|.++.+.+.++ +++++.|+.+
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~-~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELR-GSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHST-TSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCCEEEEECC-ChHHHHHHHHHH-hCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 3578999996 999999999998 6789 999999876543 23 6789999999999988776 7777744443
No 341
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.56 E-value=0.00034 Score=59.77 Aligned_cols=102 Identities=13% Similarity=0.049 Sum_probs=69.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----------ccCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----------IQSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----------~~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
.++|.|+|+ |++|+.++..|+ ..|+ +|+++++++.+.. ....++.+...|. +.++++|
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~-~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-------~a~~~aD 75 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALI-NQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY-------EDCKDAD 75 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-HHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG-------GGGTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH-------HHhCCCC
Confidence 468999995 999999999998 4565 8999998765421 1112344443331 4678888
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
.|+.+++.+. ....+..+.+..|......+.+.+.+.++....+
T Consensus 76 vVvi~ag~p~--kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vl 119 (326)
T 3pqe_A 76 IVCICAGANQ--KPGETRLELVEKNLKIFKGIVSEVMASGFDGIFL 119 (326)
T ss_dssp EEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred EEEEecccCC--CCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 7777665432 2222334479999999999999999887655433
No 342
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=97.46 E-value=0.00036 Score=60.44 Aligned_cols=77 Identities=8% Similarity=-0.052 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------------------ccCCCeEEEEecCCCHHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------------------IQSSSYCFISCDLLNPLDI 86 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------------------~~~~~~~~~~~D~~~~~~l 86 (303)
..+|+||||||+..||.+.+..|.-..|..|+++.|...... ........+.+|+.+.+.+
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 347899999999999999998886235778999988654321 0123567899999999988
Q ss_pred HHHHhcc-------CceeEEeec
Q 042242 87 KRKLTLL-------EDVTHIFWV 102 (303)
Q Consensus 87 ~~~~~~~-------~~V~~~~~~ 102 (303)
+++++.+ |.++|.++.
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSLAS 150 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEEeccc
Confidence 7777643 446666443
No 343
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.40 E-value=0.00015 Score=62.39 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=66.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCC-------CeEEEEecCCcccc-------c---cCCCe-EEEEecCCCHHHH
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTAN-------WKVYGIARKPEITA-------I---QSSSY-CFISCDLLNPLDI 86 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~-------~---~~~~~-~~~~~D~~~~~~l 86 (303)
+++.-||.|+||+|.||+.++-.|.. .. .++.+++..+.... + ..+.. .+...+ + .
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~-~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~---~ 94 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIAR-GALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--D---P 94 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHH-TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--C---H
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHh-ccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--C---h
Confidence 33445999999999999999998873 32 26888887653210 1 11111 122221 2 3
Q ss_pred HHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc
Q 042242 87 KRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA 134 (303)
Q Consensus 87 ~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~ 134 (303)
.+.++++|.|+.+++.+ .+...+..+.++.|..-+..+.+.+.+.+
T Consensus 95 ~~a~~~advVvi~aG~p--rkpGmtR~DLl~~Na~I~~~~~~~i~~~a 140 (345)
T 4h7p_A 95 RVAFDGVAIAIMCGAFP--RKAGMERKDLLEMNARIFKEQGEAIAAVA 140 (345)
T ss_dssp HHHTTTCSEEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhCCCCEEEECCCCC--CCCCCCHHHHHHHhHHHHHHHHHHHHhhc
Confidence 46889999666665543 33333444589999999999999998864
No 344
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.40 E-value=6.8e-05 Score=59.37 Aligned_cols=59 Identities=14% Similarity=0.038 Sum_probs=41.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIK 87 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~ 87 (303)
.+++|+|+||+|.||..+++.+. ..|++|++++|++.+.. ....+... ..|..+.+..+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~-~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~ 97 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFAD 97 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-HHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHH
Confidence 46799999999999999999998 57889999999865432 22223332 24766654333
No 345
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.31 E-value=0.00024 Score=62.00 Aligned_cols=73 Identities=15% Similarity=0.075 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-c-cCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-I-QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+++|+|+|+ |.||+.+++.|. ..|++|++++|++.+.. . ...+.. +.+|..+.+.+.+.++++|.|++++.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~-~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g 238 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIAL-GMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVL 238 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-hCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCC
Confidence 45689999998 999999999998 68999999999875432 1 101222 45677888889999999997777654
No 346
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.30 E-value=0.00036 Score=59.55 Aligned_cols=103 Identities=11% Similarity=0.063 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----cc-----CCCeEEEEecCCCHHHHHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----IQ-----SSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~~-----~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
..+||.|+|+ |.+|+.++..|+ ..+. +|.++++.+.+.. +. ...+.+...| .+.++++|
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~-~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD 78 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMV-LQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD 78 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-HHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-hCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence 4579999995 999999999998 4555 7999998765321 00 1234433322 24688888
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
.|+.+++.. .....+..+.++.|..-...+.+.+.+.++....+
T Consensus 79 iVvi~ag~~--~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~il 122 (326)
T 3vku_A 79 LVVITAGAP--QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFL 122 (326)
T ss_dssp EEEECCCCC------------------CHHHHHHHHHTTTCCSEEE
T ss_pred EEEECCCCC--CCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 777776543 22233344578999999999999999887665443
No 347
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.26 E-value=0.00025 Score=63.76 Aligned_cols=65 Identities=15% Similarity=0.179 Sum_probs=53.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHH-HhccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRK-LTLLE 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~-~~~~~ 94 (303)
.|+|+|+| .|-+|+.|++.|. ..||+|+++++++.... ....++.++.||.++++.|+++ ++.+|
T Consensus 3 ~M~iiI~G-~G~vG~~la~~L~-~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad 70 (461)
T 4g65_A 3 AMKIIILG-AGQVGGTLAENLV-GENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDAD 70 (461)
T ss_dssp CEEEEEEC-CSHHHHHHHHHTC-STTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCS
T ss_pred cCEEEEEC-CCHHHHHHHHHHH-HCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCC
Confidence 46899999 5999999999998 78999999999876643 1234788999999999988776 45555
No 348
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.25 E-value=0.00017 Score=63.87 Aligned_cols=68 Identities=15% Similarity=0.120 Sum_probs=54.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH-HhccCcee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK-LTLLEDVT 97 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~ 97 (303)
.++|+|+| .|.+|+.+++.|. ..|++|+++++++.... ....++.++.+|.++.+.++++ ++.++.|+
T Consensus 4 ~~~viIiG-~Gr~G~~va~~L~-~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAG-FGRFGQITGRLLL-SSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHH-HTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHH-HCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 35799999 5999999999998 68999999999987643 2345788899999999988776 56666433
No 349
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.18 E-value=0.00011 Score=62.51 Aligned_cols=102 Identities=10% Similarity=0.048 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc-----cc------CCCeEEEEecCCCHHHHHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA-----IQ------SSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~-----~~------~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
|++||.|+|| |.+|..++..|+ ..|+ +|+++++++.+.. .. ....++... .| . +.++++|
T Consensus 1 M~~kI~VIGa-G~vG~~~a~~la-~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD 72 (309)
T 1ur5_A 1 MRKKISIIGA-GFVGSTTAHWLA-AKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSD 72 (309)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHH-HTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-HCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCC
Confidence 3479999997 999999999998 5675 8999998765431 10 112222211 22 2 3578888
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
.|+..++.+. .......+....|......+.+.+.+.++...
T Consensus 73 ~Vi~a~g~p~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~ 114 (309)
T 1ur5_A 73 VIVVTSGAPR--KPGMSREDLIKVNADITRACISQAAPLSPNAV 114 (309)
T ss_dssp EEEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCE
T ss_pred EEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 7777765432 22222234678899999999999988765443
No 350
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.18 E-value=0.0016 Score=55.62 Aligned_cols=107 Identities=15% Similarity=0.032 Sum_probs=69.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc-----c------cCCCeEEEEecCCCHHHHHHHHhcc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA-----I------QSSSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~-----~------~~~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
++.+||.|+|+ |.+|..++..|+ ..++ +|+++++++.+.. . ......+... .|. +.++++
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~-~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~----~a~~~a 76 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAG-LKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY----AAIEGA 76 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG----GGGTTC
T ss_pred CcCCEEEEECC-CHHHHHHHHHHH-hCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH----HHHCCC
Confidence 44579999997 999999999998 5777 9999999876531 0 0112222211 121 478888
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
|.|+.+++.+ ........+.+..|..-...+++.+.+.++....++.
T Consensus 77 DiVIiaag~p--~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivv 123 (324)
T 3gvi_A 77 DVVIVTAGVP--RKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICI 123 (324)
T ss_dssp SEEEECCSCC--CC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CEEEEccCcC--CCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEec
Confidence 8666665432 2223334457899999999999999988765544433
No 351
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.17 E-value=0.00069 Score=57.51 Aligned_cols=73 Identities=10% Similarity=0.013 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCC---ccccc------cCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKP---EITAI------QSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~---~~~~~------~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
..+++++|+|+ |.+|+.++..|. ..|. +|+++.|++ .+... ...+..+...++.+.+.+.+.+.++|.
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~-~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi 229 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAA-LDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI 229 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHH-HTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHH-HCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence 35789999996 899999999999 6888 799999983 33211 011334555678887888888888887
Q ss_pred eeEEe
Q 042242 96 VTHIF 100 (303)
Q Consensus 96 V~~~~ 100 (303)
||++.
T Consensus 230 IINaT 234 (315)
T 3tnl_A 230 FTNAT 234 (315)
T ss_dssp EEECS
T ss_pred EEECc
Confidence 77773
No 352
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.17 E-value=0.0019 Score=54.77 Aligned_cols=106 Identities=13% Similarity=0.048 Sum_probs=68.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhc--CCCeEEEEecCCcccc-----ccCC--CeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 29 NVAVIFGVTGLVGKELARRLIST--ANWKVYGIARKPEITA-----IQSS--SYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~-----~~~~--~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
+||.|+||+|.+|..++..|... ...++.++++.+ ... +.+. ...+...--.+ ..+.++++|.|+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~---~~~~~~~aDivii~ 76 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGED---ATPALEGADVVLIS 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSC---CHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCC---cHHHhCCCCEEEEe
Confidence 48999999999999999998732 235799999876 211 1111 12222110012 23588899966666
Q ss_pred eecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 100 FWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
++.+ .....+..+.++.|..-+..+.+.+.+.++....+
T Consensus 77 ag~~--rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vl 115 (312)
T 3hhp_A 77 AGVA--RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIG 115 (312)
T ss_dssp CSCS--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEE
Confidence 5543 22233344589999999999999999887655433
No 353
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.13 E-value=0.0028 Score=53.98 Aligned_cols=105 Identities=12% Similarity=0.049 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc-----ccC------CCeEEEEecCCCHHHHHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA-----IQS------SSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~-----~~~------~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
..+||.|+| +|.+|..++..|+ ..+. +|.++++++.+.. +.+ ....+... .+ .+.++++|
T Consensus 4 ~~~kI~iiG-aG~vG~~~a~~l~-~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d----~~a~~~aD 75 (321)
T 3p7m_A 4 ARKKITLVG-AGNIGGTLAHLAL-IKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--ND----YKDLENSD 75 (321)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC----GGGGTTCS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-hCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CC----HHHHCCCC
Confidence 357999999 5999999999998 5666 8999999876531 111 12233211 12 14788888
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
.|+.+++.+. .......+.+..|......+++.+.+.++....++
T Consensus 76 vVIi~ag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~viv 120 (321)
T 3p7m_A 76 VVIVTAGVPR--KPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVIC 120 (321)
T ss_dssp EEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEcCCcCC--CCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEE
Confidence 7776655432 22223344789999999999999998876544433
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.00043 Score=59.87 Aligned_cols=72 Identities=18% Similarity=0.134 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHh-----ccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLT-----LLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~-----~~~~V~~~~ 100 (303)
.+++|||+||+|.||..+++.+. ..|++|++++|++.+.. ....+... ..|+.+.+++.+.++ +.|.|++.+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~-~~Ga~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAK-AMGYRVLGIDGGEGKEELFRSIGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSTTHHHHHHHTTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCcEEEEcCCHHHHHHHHHcCCce-EEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 46899999999999999999988 67899999999876543 11123332 247764433433333 344455553
No 355
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.12 E-value=0.0021 Score=54.60 Aligned_cols=103 Identities=8% Similarity=0.005 Sum_probs=66.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----c------cCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----I------QSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~------~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
+||.|+|+ |.+|+.++..|+ ..+. +|+++++++.+.. + ......+...|. .+.++++|.
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~-~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~------~~a~~~aDv 72 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVA-RQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND------YGPTEDSDV 72 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS------SGGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC------HHHhCCCCE
Confidence 48999996 999999999998 4555 8999999876532 0 111233332221 247888886
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
|+.+++.+. ....+..+.+..|..-...+.+.+.+.++....++
T Consensus 73 Vii~ag~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~viv 116 (314)
T 3nep_X 73 CIITAGLPR--SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIV 116 (314)
T ss_dssp EEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred EEECCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEe
Confidence 666655432 22233345899999999999999998876654433
No 356
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.10 E-value=0.00025 Score=61.09 Aligned_cols=68 Identities=16% Similarity=0.055 Sum_probs=54.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHH-HhccCceeE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRK-LTLLEDVTH 98 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~~ 98 (303)
.++|+|+|+ |.+|+.+++.|. +.|+ |+++++++........++.++.+|.+|++.++++ +++++.|+.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~-~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELR-GSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIV 183 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGG-GSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred cCCEEEECC-cHHHHHHHHHHH-hCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence 468999995 999999999998 6888 9999998865442236789999999999998876 666664433
No 357
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.02 E-value=0.0018 Score=55.36 Aligned_cols=108 Identities=12% Similarity=0.027 Sum_probs=69.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----cc----CC-CeEEEEecCCCHHHHHHHHhc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----IQ----SS-SYCFISCDLLNPLDIKRKLTL 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~~----~~-~~~~~~~D~~~~~~l~~~~~~ 92 (303)
....++|.|+|+ |.+|..++..|+ ..|. +|++++++..+.. +. .. ...++.. .|. +.+++
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~-~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~----~~~~~ 87 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISIL-MKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY----SVTAN 87 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHH-HTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG----GGGTT
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHH-hCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH----HHhCC
Confidence 345679999996 999999999998 4566 7999998764321 10 11 1122212 122 25788
Q ss_pred cCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 93 LEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 93 ~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
+|.|+.+++... +...+..+.++.|..-...+.+.+.+.++....++.
T Consensus 88 aDiVvi~aG~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvv 135 (331)
T 4aj2_A 88 SKLVIITAGARQ--QEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIV 135 (331)
T ss_dssp EEEEEECCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CCEEEEccCCCC--CCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 886666655432 222223347999999999999999988766544433
No 358
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.99 E-value=0.0028 Score=53.87 Aligned_cols=103 Identities=14% Similarity=0.066 Sum_probs=67.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCC--cccc-----c------cCCCeEEEEecCCCHHHHHHHHhcc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKP--EITA-----I------QSSSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~--~~~~-----~------~~~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
.++|.|+|+ |.+|..++..|+ ..|+ +|+++++++ .... . ......+...+ + .+.++++
T Consensus 8 ~~kv~ViGa-G~vG~~ia~~l~-~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~~a 79 (315)
T 3tl2_A 8 RKKVSVIGA-GFTGATTAFLLA-QKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTADS 79 (315)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhCCC
Confidence 469999996 999999999998 5788 899999984 2211 0 00112222111 1 1467888
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
|.|+.+++.+. ....+..+.+..|..-...+.+.+.+.++....+
T Consensus 80 DvVIiaag~p~--kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vl 124 (315)
T 3tl2_A 80 DVVVITAGIAR--KPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIV 124 (315)
T ss_dssp SEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 86666655432 2223334589999999999999999887654433
No 359
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.99 E-value=0.0037 Score=54.61 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
.++++|+|+| +|.+|+.+++.+. +.|++|++++..+........ -.++..|..|.+.+.++++.+|.|
T Consensus 10 ~~~~~IlIlG-~G~lg~~la~aa~-~lG~~viv~d~~~~~p~~~~a-d~~~~~~~~d~~~l~~~~~~~dvi 77 (377)
T 3orq_A 10 KFGATIGIIG-GGQLGKMMAQSAQ-KMGYKVVVLDPSEDCPCRYVA-HEFIQAKYDDEKALNQLGQKCDVI 77 (377)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEESCTTCTTGGGS-SEEEECCTTCHHHHHHHHHHCSEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEECCCCChhhhhC-CEEEECCCCCHHHHHHHHHhCCcc
Confidence 3468999999 6999999999998 689999999986543221111 135678999999999999888743
No 360
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.94 E-value=0.0039 Score=53.13 Aligned_cols=103 Identities=11% Similarity=0.029 Sum_probs=65.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----ccC-----CCeEEEEecCCCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----IQS-----SSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~~~-----~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
++||.|+|+ |++|..++..|+ ..+. +|.+++.++.+.. +.+ ..+++. . .+ .+.++++|.
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~-~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDv 77 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMA-LRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDV 77 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHH-HTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCE
Confidence 368999997 999999999998 5666 8999999865432 111 122222 1 12 345888887
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
|+.++.... .......+....|......+++.+.+.++....+.
T Consensus 78 Vii~~g~p~--k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv 121 (318)
T 1y6j_A 78 IVVTAGANR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 121 (318)
T ss_dssp EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred EEEcCCCCC--CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEE
Confidence 666655432 22222334789999999999999998766554443
No 361
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.93 E-value=0.00075 Score=54.14 Aligned_cols=63 Identities=24% Similarity=0.229 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
+.++|.|+| +|.+|+.+++.|. ..|++|++.+|++.+.. ....++... ++.+.++++|.|+.+
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~-~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLV-GSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVA 90 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHH-HTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence 346899999 8999999999998 67899999999865432 222244432 245677777755544
No 362
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.91 E-value=0.0003 Score=60.42 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
.+++|+|+||+|.||..+++.+. ..|++|++++|++.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~-~~G~~V~~~~~~~~~ 182 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAK-LKGCKVVGAAGSDEK 182 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHH-HTTCEEEEEESSHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHHH-HCCCEEEEEeCCHHH
Confidence 46899999999999999999998 688999999987654
No 363
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.89 E-value=0.00081 Score=53.65 Aligned_cols=70 Identities=19% Similarity=0.212 Sum_probs=45.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeE-EEE-ecCCCHHHHHHHHhccCceeEEe
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYC-FIS-CDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
++|+|+||+|++|+.+++.|+ +.|++|++++|++.+......... .+. .|+. ..++.+.++++|.|+++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLA-TLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeC
Confidence 379999999999999999998 689999999998654321000000 000 1121 124556778888666663
No 364
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.89 E-value=0.004 Score=52.33 Aligned_cols=103 Identities=11% Similarity=-0.006 Sum_probs=69.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----c------cCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----I------QSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~------~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
+||.|+|+ |.+|..++..|+ ..++ +|.++++++.... . ......+... .| .+.++++|.
T Consensus 1 MkI~ViGa-G~vG~~la~~l~-~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDi 72 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCL-LNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEI 72 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCE
Confidence 48999998 999999999998 5666 8999999875431 0 0112222222 12 357888886
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
|+.+++.... ...+..+.+..|..-...+.+.+.+.++..+.++
T Consensus 73 VViaag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv 116 (294)
T 1oju_A 73 IVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV 116 (294)
T ss_dssp EEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred EEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 6666554322 2223344799999999999999998876654443
No 365
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.82 E-value=0.0063 Score=51.77 Aligned_cols=104 Identities=12% Similarity=0.035 Sum_probs=68.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc-----------ccCCCeEEEEecCCCHHHHHHHHhcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA-----------IQSSSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~-----------~~~~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
+++||.|+|| |.+|..++..|+ ..+ .+|.++++++.+.. .....+++. .| + .+.++++
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~-~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~a~~~a 75 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLV-NQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YSDCHDA 75 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-HHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GGGGTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-hCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HHHhCCC
Confidence 3469999998 999999999998 445 47999998753321 001233333 22 2 3468888
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
|.|+..+...... .....+.+..|..-...+.+.+.+.++.-..++
T Consensus 76 DvVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv 121 (317)
T 3d0o_A 76 DLVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV 121 (317)
T ss_dssp SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 8766665543222 222334789999999999999988866554443
No 366
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.78 E-value=0.00031 Score=58.51 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=29.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-ecCC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGI-ARKP 63 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~ 63 (303)
+++|.|+|++|.+|+.+++.+....++++.++ +|++
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~ 41 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG 41 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence 35899999999999999999876688997755 4443
No 367
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.77 E-value=0.0058 Score=52.21 Aligned_cols=104 Identities=10% Similarity=0.031 Sum_probs=67.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----cc-----CCCeEEEEecCCCHHHHHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----IQ-----SSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~~-----~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
+.+||.|+|| |.+|..++..|+ ..+. +|.++++.+.+.. +. ..++.+. .| + .+.++++|
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~-~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~----~~a~~~aD 78 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMV-LQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--E----YSDAKDAD 78 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-HHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----GGGGGGCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-cCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--C----HHHhCCCC
Confidence 4479999997 999999999998 3443 7999998754431 10 1233333 22 2 34688999
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
.|+..+.... .......+.+..|......+.+.+.+.++.-..++
T Consensus 79 vVii~ag~~~--k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv 123 (326)
T 2zqz_A 79 LVVITAGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV 123 (326)
T ss_dssp EEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred EEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 7666655432 22233334789999999999999998876655444
No 368
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.77 E-value=0.00065 Score=58.85 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|+|+||+|.||..+++.+. ..|++|++++|++.+.
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~-~~Ga~Vi~~~~~~~~~ 208 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIAR-AYGLKILGTAGTEEGQ 208 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESSHHHH
T ss_pred CcCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChhHH
Confidence 46799999999999999999998 6889999999986553
No 369
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.75 E-value=0.0026 Score=52.99 Aligned_cols=66 Identities=17% Similarity=0.080 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.+++|+|+|+ |.+|+.++..|. ..|+ +|++..|++.+......++..+ ..+++.+.++++|.||++
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~-~~G~~~v~v~~R~~~~a~~la~~~~~~-----~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELY-KIVRPTLTVANRTMSRFNNWSLNINKI-----NLSHAESHLDEFDIIINT 182 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHH-TTCCSCCEEECSCGGGGTTCCSCCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHhcccc-----cHhhHHHHhcCCCEEEEC
Confidence 4689999995 899999999999 6888 7999999987654222233222 344566677888867666
No 370
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.72 E-value=0.0068 Score=51.64 Aligned_cols=104 Identities=10% Similarity=-0.013 Sum_probs=67.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----c----c-CCCeEEE-EecCCCHHHHHHHHhcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----I----Q-SSSYCFI-SCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~----~-~~~~~~~-~~D~~~~~~l~~~~~~~ 93 (303)
..+||.|+|+ |.+|..++..|+ ..|+ +|.++++.+.+.. + . .....+. ..|+ + .++++
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la-~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~------~-~~~da 90 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVL-MKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY------S-VSAGS 90 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHH-HHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS------C-SCSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-hCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH------H-HhCCC
Confidence 3479999997 999999999998 4565 8999998764321 0 0 1112222 2233 1 27788
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
|.|+..++....+ ..+..+.+..|..-...+.+.+.+.++....++
T Consensus 91 DiVIitaG~p~kp--G~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilv 136 (330)
T 3ldh_A 91 KLVVITAGARQQE--GESRLNLVQRNVNIFKFIIPNIVKHSPDCLKEL 136 (330)
T ss_dssp SEEEECCSCCCCS--SCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEe
Confidence 8666665543222 222233789999999999999998866554433
No 371
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=96.69 E-value=0.011 Score=49.62 Aligned_cols=102 Identities=12% Similarity=0.035 Sum_probs=66.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc-----c------cCCCeEEEEe-cCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA-----I------QSSSYCFISC-DLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-----~------~~~~~~~~~~-D~~~~~~l~~~~~~~~~ 95 (303)
+||.|+|| |.||+.++..|+.+.- -++.+++..+.... + ......+... |. +.++++|.
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~-------~~~~~aDv 72 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSEI 72 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG-------GGGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH-------HHhCCCCE
Confidence 48999995 9999999999873322 36999998764321 1 1112223222 32 25778886
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
|+..++.+- +...+..+.++.|..-...+.+.+.+.++.-+.+
T Consensus 73 VvitAG~pr--kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivl 115 (294)
T 2x0j_A 73 IVVTAGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKIL 115 (294)
T ss_dssp EEECCCCCC--CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEE
T ss_pred EEEecCCCC--CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 666665432 2333344489999999999999999887765433
No 372
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.69 E-value=0.00016 Score=54.08 Aligned_cols=66 Identities=17% Similarity=0.245 Sum_probs=45.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
+++|+|+| +|.+|+.+++.|. ..|++|++.+|++.+... ...+.... ... ++.+.++++|.|+.+.
T Consensus 21 ~~~v~iiG-~G~iG~~~a~~l~-~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~---~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVG-NGMLASEIAPYFS-YPQYKVTVAGRNIDHVRAFAEKYEYEYV--LIN---DIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEEC-CSHHHHHHGGGCC-TTTCEEEEEESCHHHHHHHHHHHTCEEE--ECS---CHHHHHHTCSEEEECS
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-hCCCEEEEEcCCHHHHHHHHHHhCCceE--eec---CHHHHhcCCCEEEEeC
Confidence 68999999 5999999999998 578899999998765321 11122221 223 3556778888655553
No 373
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.69 E-value=0.00039 Score=59.56 Aligned_cols=38 Identities=13% Similarity=0.096 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
.+++|+|+||+|.||..+++.+. ..|++|++++|++.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~-~~G~~V~~~~~~~~~ 177 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAK-ALGAKLIGTVGTAQK 177 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-HHTCEEEEEESSHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeCCHHH
Confidence 46899999999999999999998 578899999998654
No 374
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.69 E-value=0.0028 Score=53.52 Aligned_cols=37 Identities=24% Similarity=0.261 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE 64 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 64 (303)
|.++|.|+||.|.+|..++..|. ..|++|++.+|++.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~-~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLR-ASGYPISILDREDW 56 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHH-TTTCCEEEECTTCG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHH-hCCCeEEEEECCcc
Confidence 45689999999999999999998 68999999998764
No 375
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.68 E-value=0.0015 Score=54.23 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=30.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEE-EecCCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYG-IARKPE 64 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~-~~r~~~ 64 (303)
+.||.|+|++|.+|+.+++.+.+..++++.+ ++|+++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~ 44 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGS 44 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCc
Confidence 4699999999999999999998678899666 566543
No 376
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.66 E-value=0.00088 Score=57.79 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=34.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|||+||+|.||..+++.+. ..|++|++++|++.+.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~-~~G~~V~~~~~~~~~~ 193 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAK-MMGCYVVGSAGSKEKV 193 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHH
Confidence 46799999999999999999887 6789999999986553
No 377
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.66 E-value=0.00065 Score=58.28 Aligned_cols=105 Identities=10% Similarity=-0.027 Sum_probs=66.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccc-----------cCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAI-----------QSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~-----------~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
.+||.|+|| |.+|..++..|. ..|+ +|+++++++..... ......+.. ..++++.++++|.
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la-~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea~~~aDi 81 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCA-LRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGADC 81 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-HHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHHhCCCCE
Confidence 358999997 999999999998 5777 89999998754320 001111111 1234557888886
Q ss_pred eeEEeecccccCCh---HHHHHHHHHHHHHHHHHHHHHhhccCCccE
Q 042242 96 VTHIFWVTWASQFA---SDMHKCCEQNKAMMCNALNAILPRAKALKH 139 (303)
Q Consensus 96 V~~~~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~ 139 (303)
|+..+......... ....+....|..-...+.+.+.+.++....
T Consensus 82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~v 128 (331)
T 1pzg_A 82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFI 128 (331)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEE
Confidence 66665432211110 012236788888889999998887655433
No 378
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.62 E-value=0.00073 Score=60.52 Aligned_cols=37 Identities=19% Similarity=0.106 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
|.++|.|+| .|++|..++..|. +.|++|++++|++.+
T Consensus 1 M~mkI~VIG-~G~vG~~lA~~La-~~G~~V~~~D~~~~~ 37 (450)
T 3gg2_A 1 MSLDIAVVG-IGYVGLVSATCFA-ELGANVRCIDTDRNK 37 (450)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSCHHH
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-hcCCEEEEEECCHHH
Confidence 346999999 6999999999998 689999999998765
No 379
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.61 E-value=0.00058 Score=58.64 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
.+++|+|+||+|.||..+++.+. ..|++|++++|++.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~-~~G~~Vi~~~~~~~~ 182 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWAR-HLGATVIGTVSTEEK 182 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHH-HTTCEEEEEESSHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEeCCHHH
Confidence 46799999999999999999998 678999999998654
No 380
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.60 E-value=0.004 Score=55.23 Aligned_cols=68 Identities=13% Similarity=0.137 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
++++|+|+| +|.+|+.+++.+. +.|++|++++..+........+ ..+..|..|.+.+.++++.+|.|+
T Consensus 34 ~~~~IlIlG-~G~lg~~~~~aa~-~lG~~v~v~d~~~~~p~~~~ad-~~~~~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 34 PGAWLGMVG-GGQLGRMFCFAAQ-SMGYRVAVLDPDPASPAGAVAD-RHLRAAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSCTTCHHHHHSS-EEECCCTTCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEECCCCcCchhhhCC-EEEECCcCCHHHHHHHHhcCCEEE
Confidence 467999999 6999999999998 6899999998765432211111 355689999999999988887443
No 381
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.58 E-value=0.0011 Score=56.99 Aligned_cols=56 Identities=23% Similarity=0.215 Sum_probs=40.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-c-cCCCeEEEEecCCCHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-I-QSSSYCFISCDLLNPL 84 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~~D~~~~~ 84 (303)
.+++|||+||+|.||..+++.+. ..|++|++++|++.+.. . ...+... ..|..+.+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~ 206 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIAR-LKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNED 206 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHH
Confidence 46799999999999999999887 68999999999876543 2 2334432 24655543
No 382
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.57 E-value=0.0021 Score=54.26 Aligned_cols=72 Identities=13% Similarity=0.059 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
.+.+|+|+|++|.+|..+++.+. ..|.+|++++|++.+.. ....+...+ .|..+.+.+.+.+.++|.|++ ++
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~-~~Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g 197 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVAR-AMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLE-VR 197 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-HTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHhcCCCEE-EECCcchhHHHHhcCceEEEE-CC
Confidence 46799999999999999999887 67889999999776543 112233322 455541334444466676666 54
No 383
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.55 E-value=0.0099 Score=52.09 Aligned_cols=67 Identities=15% Similarity=0.134 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
++++|+|+| +|.+|+.+++.+. ..|++|++++..+........+ ..+..|..|.+.+.+.++.+|.|
T Consensus 13 ~~k~IlIlG-~G~~g~~la~aa~-~~G~~vi~~d~~~~~~~~~~ad-~~~~~~~~d~~~l~~~~~~~dvI 79 (389)
T 3q2o_A 13 PGKTIGIIG-GGQLGRMMALAAK-EMGYKIAVLDPTKNSPCAQVAD-IEIVASYDDLKAIQHLAEISDVV 79 (389)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEESSTTCTTTTTCS-EEEECCTTCHHHHHHHHHTCSEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HcCCEEEEEeCCCCCchHHhCC-ceEecCcCCHHHHHHHHHhCCEe
Confidence 568999999 6899999999998 7899999998765432211112 24568999999999999887743
No 384
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=96.53 E-value=0.0029 Score=54.37 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhh--cCCCeEEEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLIS--TANWKVYGIA 60 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~--~~g~~V~~~~ 60 (303)
|+++|.|.||||++|+.+++.|++ ....+++++.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 346899999999999999999982 2445666665
No 385
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=96.51 E-value=0.0064 Score=53.59 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=50.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
+++|+|+| +|.+|+.+++.+. +.|++|++++ .+.... ........+.+|..|.+.+.++++.+|.
T Consensus 24 ~~~I~ilG-gG~lg~~l~~aa~-~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~ 89 (403)
T 3k5i_A 24 SRKVGVLG-GGQLGRMLVESAN-RLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDV 89 (403)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-HHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCE
Confidence 67999999 5899999999998 6899999999 543322 1122224567899999999999988874
No 386
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.50 E-value=0.0065 Score=51.72 Aligned_cols=103 Identities=10% Similarity=0.018 Sum_probs=65.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----c-----cCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----I-----QSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~-----~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
+||.|+|| |.+|..++..|+ ..+. +|.++++.+.+.. + ....+++.. | + .+.++++|.|
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~-~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvV 76 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMA-QQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLV 76 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-cCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence 69999997 999999999998 3454 7999998754321 0 012333332 2 2 3468888876
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
+..+.... .......+.+..|......+.+.+.+.++.-..++.
T Consensus 77 ii~ag~~~--~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 120 (318)
T 1ez4_A 77 VITAGAPQ--KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA 120 (318)
T ss_dssp EECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred EECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 66654432 222333347889999999999999988766554443
No 387
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.50 E-value=0.0008 Score=58.34 Aligned_cols=39 Identities=15% Similarity=-0.051 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|+|+||+|.||..+++.+. ..|++|++++|++.+.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~-~~Ga~Vi~~~~~~~~~ 200 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKL 200 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHH-HcCCEEEEEeCCHHHH
Confidence 46799999999999999999998 6889999999986553
No 388
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.50 E-value=0.005 Score=52.16 Aligned_cols=72 Identities=13% Similarity=0.147 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCc---cccc------cCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPE---ITAI------QSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~---~~~~------~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
..+++++|+|+ |.+|+.++..|. ..|. +|+++.|+++ +... ...+..+...++.+.+.+.+.+.++|.
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~-~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di 223 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAA-IEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI 223 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHH-HTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred cCCCEEEEECc-CHHHHHHHHHHH-HcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence 35789999996 899999999999 5787 6999999833 2211 011233445677775555677888887
Q ss_pred eeEE
Q 042242 96 VTHI 99 (303)
Q Consensus 96 V~~~ 99 (303)
||++
T Consensus 224 IINa 227 (312)
T 3t4e_A 224 LTNG 227 (312)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7776
No 389
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.50 E-value=0.0074 Score=51.33 Aligned_cols=103 Identities=10% Similarity=0.039 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc-----c------cCCCeEEEEecCCCHHHHHHHHhcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA-----I------QSSSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~-----~------~~~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
+.+||.|+|+ |.+|..++..|+ ..+ .+|+++++++.... . ....+++.. | + .+.++++
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~-~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~a 75 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALM-NQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDA 75 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHH-HHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTC
T ss_pred CCCEEEEECc-CHHHHHHHHHHH-hCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCC
Confidence 3469999997 999999999997 344 37999999864321 0 001333332 1 2 2457888
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
|.|+.++........ ...+.+..|......+++.+.+.++.-..+
T Consensus 76 DvViia~~~~~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~~i 120 (316)
T 1ldn_A 76 DLVVICAGANQKPGE--TRLDLVDKNIAIFRSIVESVMASGFQGLFL 120 (316)
T ss_dssp SEEEECCSCCCCTTT--CSGGGHHHHHHHHHHHHHHHHHHTCCSEEE
T ss_pred CEEEEcCCCCCCCCC--CHHHHHHcChHHHHHHHHHHHHHCCCCEEE
Confidence 866666543322211 122367888888888999888876554433
No 390
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.47 E-value=0.0012 Score=57.36 Aligned_cols=71 Identities=20% Similarity=0.123 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccccc----CCCeEEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQ----SSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
..++|+|+|+ |-+|+.+++.|. ..|.+|++++|++.+.... ...+. ....+.+.+.+.++++|.|+++...
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~-~~Ga~V~v~dr~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAV-GLGAQVQIFDINVERLSYLETLFGSRVE---LLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGSE---EEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHhhCceeE---eeeCCHHHHHHHHcCCCEEEECCCc
Confidence 4589999997 999999999998 6788999999987653210 01121 1223456677788888878777543
No 391
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.45 E-value=0.016 Score=49.25 Aligned_cols=101 Identities=10% Similarity=0.016 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc---cc-C------CCeEEEEecCCCHHHHHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA---IQ-S------SSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~---~~-~------~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
+.++|.|+|+ |.+|..++..|. ..|+ +|++++|++.... .. . ....+... .+. +.++++|
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~-~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD 77 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAA-QRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDAD 77 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHH-HTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-hCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCC
Confidence 3469999996 999999999998 6788 9999999864321 10 0 12222221 122 2466777
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKAL 137 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~ 137 (303)
.|+.++...... .....+....|......+++.+.+.++.-
T Consensus 78 ~Vii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~~~~~ 118 (319)
T 1lld_A 78 MVVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNA 118 (319)
T ss_dssp EEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred EEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 555544322111 12223478888888888888887654433
No 392
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.45 E-value=0.004 Score=52.06 Aligned_cols=69 Identities=17% Similarity=0.174 Sum_probs=48.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccc-------cCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAI-------QSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
..+++++|+|+ |.+|+.++..|. ..|. +|++++|+..+... ..+.+.+...++. ++.+.++++|.|+
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~-~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~~~DiVI 199 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALV-THGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIEDVIAAADGVV 199 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHH-HTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHHHHHHSSEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHhcCCEEE
Confidence 35789999996 899999999999 5788 69999998765421 0122334344443 3556778888777
Q ss_pred EE
Q 042242 98 HI 99 (303)
Q Consensus 98 ~~ 99 (303)
++
T Consensus 200 na 201 (283)
T 3jyo_A 200 NA 201 (283)
T ss_dssp EC
T ss_pred EC
Confidence 76
No 393
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.41 E-value=0.0013 Score=57.11 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEI 65 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~ 65 (303)
++|+|+||+|.||..+++.+. ..|+ +|++++|++.+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~-~~Ga~~Vi~~~~~~~~ 198 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGH-FLGCSRVVGICGTHEK 198 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHH-HTTCSEEEEEESCHHH
T ss_pred cEEEEECCCcHHHHHHHHHHH-HCCCCeEEEEeCCHHH
Confidence 899999999999999999988 6899 99999998654
No 394
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.41 E-value=0.01 Score=50.12 Aligned_cols=99 Identities=14% Similarity=0.048 Sum_probs=61.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----ccC-----CCeEEEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----IQS-----SSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~~~-----~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
+||.|+|+ |.+|..++..|. ..|+ +|+++++++.+.. ... ....+.. .+. +.++++|.|
T Consensus 1 mkI~VIGa-G~vG~~la~~la-~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvV 71 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALV-LRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVV 71 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEE
Confidence 48999997 999999999998 6788 8999999865321 111 1222222 122 357888866
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
+.++.... .......+.+..|......+++.+.+.++.-.
T Consensus 72 Ii~~~~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~ 111 (304)
T 2v6b_A 72 ILTAGANQ--KPGESRLDLLEKNADIFRELVPQITRAAPDAV 111 (304)
T ss_dssp EECC--------------CHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred EEcCCCCC--CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeE
Confidence 66543322 11222334678899999999998888755443
No 395
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=96.40 E-value=0.0013 Score=55.82 Aligned_cols=101 Identities=12% Similarity=-0.010 Sum_probs=63.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCccccc-----cC------CCeEEEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEITAI-----QS------SSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~-----~~------~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
++|.|+|+ |.+|..++..|... .+++|+++++++..... .. ....+... .|. .+ ++++|.|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDIV 73 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCEE
Confidence 47999997 99999999999843 37899999998754321 01 11111111 222 23 7778855
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
+.++.... .......+.+..|......+.+.+.+.++.-.
T Consensus 74 iiav~~p~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ 113 (310)
T 1guz_A 74 IITAGLPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPI 113 (310)
T ss_dssp EECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCE
T ss_pred EEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 55543321 11111234788999999999998887755443
No 396
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.37 E-value=0.002 Score=54.37 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=29.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
..|++||-++| -|.+|..+++.|+ +.||+|++.+|++.+.
T Consensus 2 ~~Ms~kIgfIG-LG~MG~~mA~~L~-~~G~~V~v~dr~~~~~ 41 (297)
T 4gbj_A 2 NAMSEKIAFLG-LGNLGTPIAEILL-EAGYELVVWNRTASKA 41 (297)
T ss_dssp --CCCEEEEEC-CSTTHHHHHHHHH-HTTCEEEEC-------
T ss_pred CCCCCcEEEEe-cHHHHHHHHHHHH-HCCCeEEEEeCCHHHH
Confidence 35778999999 8999999999999 6899999999987764
No 397
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.32 E-value=0.015 Score=49.70 Aligned_cols=101 Identities=15% Similarity=0.042 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccc-----c------CCCeEEEEecCCCHHHHHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAI-----Q------SSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~-----~------~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
|.++|.|+|| |.+|..++..|. ..|+ +|++.++++..... . ....++... .| + +.++++|
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la-~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~~aD 84 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLG-QKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE--NN---Y-EYLQNSD 84 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-HTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC--CC---H-HHHCCCC
Confidence 4479999997 999999999998 5788 89999998754320 0 011112111 22 2 3678888
Q ss_pred ceeEEeeccc-ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 95 DVTHIFWVTW-ASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 95 ~V~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
.|+..+..+. ...... +....|..-...+.+.+.+.++...
T Consensus 85 ~VI~avg~p~k~g~tr~---dl~~~n~~i~~~i~~~i~~~~p~a~ 126 (328)
T 2hjr_A 85 VVIITAGVPRKPNMTRS---DLLTVNAKIVGSVAENVGKYCPNAF 126 (328)
T ss_dssp EEEECCSCCCCTTCCSG---GGHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred EEEEcCCCCCCCCCchh---hHHhhhHHHHHHHHHHHHHHCCCeE
Confidence 6555543322 111112 2567788888888888887765543
No 398
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.30 E-value=0.0021 Score=56.15 Aligned_cols=73 Identities=11% Similarity=0.029 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccC-CCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQS-SSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~-~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+++|+|+|+ |-||+.+++.+. ..|.+|++.+|++.+.. ... .+..+ ..+..+.+.+.+.++++|.|+.++.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~-~~Ga~V~~~d~~~~~l~~~~~~~g~~~-~~~~~~~~~l~~~l~~aDvVi~~~~ 240 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIAN-GMGATVTVLDINIDKLRQLDAEFCGRI-HTRYSSAYELEGAVKRADLVIGAVL 240 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTTTSS-EEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHhcCCee-EeccCCHHHHHHHHcCCCEEEECCC
Confidence 45789999997 999999999998 68889999999876532 110 11111 2334456678888888887776644
No 399
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.30 E-value=0.004 Score=53.86 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIAR 61 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 61 (303)
|+.+|.|.||+|++|+.+++.|.....++|+++.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~ 41 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAA 41 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 55699999999999999999998555678888875
No 400
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.29 E-value=0.019 Score=48.66 Aligned_cols=102 Identities=15% Similarity=0.094 Sum_probs=67.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc-----cc-----CCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA-----IQ-----SSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~-----~~-----~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
+||.|+|| |.+|..++..|+. .+ .+|.++++++.+.. +. ..++.+.. + + .+.++++|.|
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~-~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~V 71 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALAL-LGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAV 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEE
Confidence 48999997 9999999999983 44 47999998764331 11 12333332 2 2 2458888866
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
+..+...... .....+....|......+.+.+.+.++.-..++
T Consensus 72 ii~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv 114 (310)
T 2xxj_A 72 VLAAGVAQRP--GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV 114 (310)
T ss_dssp EECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EECCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEE
Confidence 6665543222 222334789999999999999998876654444
No 401
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.28 E-value=0.0036 Score=53.99 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=28.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcC-----CCeEEEEecC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTA-----NWKVYGIARK 62 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~-----g~~V~~~~r~ 62 (303)
+++|.|.||||++|+.|++.|++.. .++|+.+.++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~ 48 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA 48 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC
Confidence 3699999999999999999998433 4578887653
No 402
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=96.27 E-value=0.013 Score=49.42 Aligned_cols=63 Identities=14% Similarity=0.078 Sum_probs=43.7
Q ss_pred CCCE-EEEEcC-C-----------------ChhHHHHHHHHhhcCCCeEEEEecCCccccc------------------c
Q 042242 27 AKNV-AVIFGV-T-----------------GLVGKELARRLISTANWKVYGIARKPEITAI------------------Q 69 (303)
Q Consensus 27 ~~~~-vlVtGa-t-----------------G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------------------~ 69 (303)
.+++ ||||+| | |-.|.+++++++ ..|++|+.+.|..+-.++ .
T Consensus 35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~-~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~ 113 (313)
T 1p9o_A 35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFL-AAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA 113 (313)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHH-HTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHH-HCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence 4566 888854 5 889999999999 699999999996542221 0
Q ss_pred CCCeEEEEecCCCHHHHHHHH
Q 042242 70 SSSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 70 ~~~~~~~~~D~~~~~~l~~~~ 90 (303)
..++..+.+|+...+.+.+++
T Consensus 114 ~~~~~~i~v~v~sa~~m~~av 134 (313)
T 1p9o_A 114 LSGLLSLEAEENALPGFAEAL 134 (313)
T ss_dssp CCSEEEEEEETTTSTTHHHHH
T ss_pred ccccceeeeccccHHHHHHHH
Confidence 124446677777666555544
No 403
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=96.27 E-value=0.016 Score=50.11 Aligned_cols=65 Identities=18% Similarity=0.177 Sum_probs=45.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecC-CCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDL-LNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~-~~~~~l~~~~~~~~~ 95 (303)
+|||+|+| +|..|..++..+. +.||+|++++.++........+ +++..|. .|.+.+....+.+|.
T Consensus 1 MK~I~ilG-gg~~g~~~~~~Ak-~~G~~vv~vd~~~~~~~~~~aD-~~~~~~~~~d~~~~~~~~~~~D~ 66 (363)
T 4ffl_A 1 MKTICLVG-GKLQGFEAAYLSK-KAGMKVVLVDKNPQALIRNYAD-EFYCFDVIKEPEKLLELSKRVDA 66 (363)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEESCTTCTTTTTSS-EEEECCTTTCHHHHHHHHTSSSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCCCChhHhhCC-EEEECCCCcCHHHHHHHhcCCCE
Confidence 37999999 6899999999887 7899999999876543211111 2444554 466666666677764
No 404
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.25 E-value=0.0023 Score=55.09 Aligned_cols=39 Identities=8% Similarity=-0.037 Sum_probs=33.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|||+|++|.||..+++.+. ..|++|++++|++.+.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~-~~G~~Vi~~~~~~~~~ 204 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAK-LFGARVIATAGSEDKL 204 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHH-HTTCEEEEEESSHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHH
Confidence 46799999999999999999987 6789999999976553
No 405
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.22 E-value=0.0038 Score=52.29 Aligned_cols=38 Identities=21% Similarity=0.398 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
|.++|.|+|+||.+|+.+++.|. ..|++|++.+|++.+
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~-~~g~~V~~~~r~~~~ 47 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIH-DSAHHLAAIEIAPEG 47 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-HSSSEEEEECCSHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEECCHHH
Confidence 34699999988999999999998 688999999998654
No 406
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.22 E-value=0.0013 Score=55.41 Aligned_cols=71 Identities=10% Similarity=0.081 Sum_probs=48.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccc---c-CCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAI---Q-SSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~---~-~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
..+++|+|+|+ |.+|+.++..|+ ..|+ +|++..|++.+... . ..... +..+.+++.+.+.++|.|+++.
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~-~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t 212 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLL-STAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINTT 212 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHH-TTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECS
T ss_pred CCCCEEEEECc-HHHHHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECC
Confidence 35689999996 889999999999 6787 89999998765321 0 01000 1123345667788888777774
Q ss_pred ec
Q 042242 101 WV 102 (303)
Q Consensus 101 ~~ 102 (303)
..
T Consensus 213 ~~ 214 (297)
T 2egg_A 213 SV 214 (297)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 407
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.20 E-value=0.0066 Score=51.72 Aligned_cols=98 Identities=14% Similarity=0.013 Sum_probs=62.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccccc----------CCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITAIQ----------SSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~----------~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
++|.|+|+ |.+|..++..|+ ..|+ +|++++|++...... .....+. . .+. +.++++|.|
T Consensus 1 mkI~VIGa-G~~G~~la~~l~-~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~----~~~~~aDvV 71 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALL-MKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDY----ADLKGSDVV 71 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCG----GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCH----HHhCCCCEE
Confidence 47999997 999999999998 5788 899999986432200 0112222 1 232 246778855
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKAL 137 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~ 137 (303)
+.++....... ....+....|......+++.+.+.++.-
T Consensus 72 iiav~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~~~~ 110 (319)
T 1a5z_A 72 IVAAGVPQKPG--ETRLQLLGRNARVMKEIARNVSKYAPDS 110 (319)
T ss_dssp EECCCCCCCSS--CCHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred EEccCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 55543322111 1122367888888889999888765443
No 408
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.19 E-value=0.014 Score=49.47 Aligned_cols=61 Identities=13% Similarity=0.113 Sum_probs=46.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
...+++|.|.| .|.||+.+++.|. ..|++|++.+|++... .++.... ...++.++++.+|.
T Consensus 136 ~l~g~tvGIiG-~G~IG~~vA~~l~-~~G~~V~~~dr~~~~~----~~~~~~~----~~~~l~ell~~aDi 196 (315)
T 3pp8_A 136 TREEFSVGIMG-AGVLGAKVAESLQ-AWGFPLRCWSRSRKSW----PGVESYV----GREELRAFLNQTRV 196 (315)
T ss_dssp CSTTCCEEEEC-CSHHHHHHHHHHH-TTTCCEEEEESSCCCC----TTCEEEE----SHHHHHHHHHTCSE
T ss_pred CcCCCEEEEEe-eCHHHHHHHHHHH-HCCCEEEEEcCCchhh----hhhhhhc----ccCCHHHHHhhCCE
Confidence 44678999999 7999999999998 7899999999987542 2232221 23678889999985
No 409
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.14 E-value=0.0096 Score=50.38 Aligned_cols=76 Identities=12% Similarity=-0.028 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccC----CCeE-EEEecCCCHHHHHHHHhccCceeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQS----SSYC-FISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~~~~-~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
...+++|+|+|++..+|+.+++.|+ ..|..|++++|+........ ...+ .......+.+.+.+.++.+|.||..
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~-~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsA 252 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLA-NDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG 252 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHH-TTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHH-HCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEEC
Confidence 3467899999988889999999998 67889999988754432111 1111 1111113447789999999966655
Q ss_pred ee
Q 042242 100 FW 101 (303)
Q Consensus 100 ~~ 101 (303)
..
T Consensus 253 tg 254 (320)
T 1edz_A 253 VP 254 (320)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 410
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.12 E-value=0.0061 Score=51.68 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=32.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
+++|.|+| .|.+|..+++.|. ..|++|++.+|++.+.
T Consensus 21 m~~I~iIG-~G~mG~~~A~~l~-~~G~~V~~~dr~~~~~ 57 (310)
T 3doj_A 21 MMEVGFLG-LGIMGKAMSMNLL-KNGFKVTVWNRTLSKC 57 (310)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSSGGGG
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-HCCCeEEEEeCCHHHH
Confidence 46899999 7999999999999 6899999999987654
No 411
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.11 E-value=0.077 Score=45.93 Aligned_cols=105 Identities=11% Similarity=-0.003 Sum_probs=64.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-----eEEEEecCCccc---------cccC---CCeEEEEecCCCHHHHHHHH
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-----KVYGIARKPEIT---------AIQS---SSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-----~V~~~~r~~~~~---------~~~~---~~~~~~~~D~~~~~~l~~~~ 90 (303)
..||.|+||+|.||.+++-.|+ ..+. .|.+.+...+.. .+.+ +-...+.+ .+ .-.+.+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~-~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~~--~~y~~~ 106 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLA-SGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--GI--DPYEVF 106 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHH-HTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--ES--CHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHH-cCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE--ec--CCHHHh
Confidence 4689999999999999999998 3332 265554433221 0111 11111111 11 134688
Q ss_pred hccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccE
Q 042242 91 TLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPR-AKALKH 139 (303)
Q Consensus 91 ~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~ 139 (303)
+++|.|+..++. +.+...+..+.++.|..-+..+...+.+. ++..+.
T Consensus 107 ~daDvVVitag~--prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~iv 154 (375)
T 7mdh_A 107 EDVDWALLIGAK--PRGPGMERAALLDINGQIFADQGKALNAVASKNVKV 154 (375)
T ss_dssp TTCSEEEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEE
T ss_pred CCCCEEEEcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 899866655543 23333344458999999999999999875 555433
No 412
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.10 E-value=0.015 Score=49.39 Aligned_cols=100 Identities=11% Similarity=0.024 Sum_probs=61.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccccc-----------CCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQ-----------SSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~-----------~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
.++|.|+|+ |.+|..++..|+ ..|+ +|+++++++...... .....+... .| + +.++++|.
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la-~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~a~~~aDi 75 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVG-KDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-ADISGSDV 75 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-HHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCE
Confidence 368999996 999999999998 5687 899999987543210 001111111 12 2 35677885
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKAL 137 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~ 137 (303)
|+.++.......... .+....|......+++.+.+.++.-
T Consensus 76 Vi~avg~p~~~g~~r--~d~~~~~~~i~~~i~~~i~~~~~~~ 115 (317)
T 2ewd_A 76 VIITASIPGRPKDDR--SELLFGNARILDSVAEGVKKYCPNA 115 (317)
T ss_dssp EEECCCCSSCCSSCG--GGGHHHHHHHHHHHHHHHHHHCTTS
T ss_pred EEEeCCCCCCCCCcH--HHHHHhhHHHHHHHHHHHHHHCCCc
Confidence 555544322211111 1256677777778888887765543
No 413
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.09 E-value=0.0018 Score=56.02 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|+|+||+|.||..+++.+. ..|.+|++++|++.+.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~ 205 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLAR-AFGAEVYATAGSTGKC 205 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHH-HcCCEEEEEeCCHHHH
Confidence 46799999999999999999988 6899999999987654
No 414
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=96.05 E-value=0.023 Score=49.45 Aligned_cols=66 Identities=18% Similarity=0.144 Sum_probs=48.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
|+|+|+|+ |..|+.+++.|. +.|++|++++..+........+ .++.+|..|.+.+.+.+..+|.|+
T Consensus 2 ~~Ililg~-g~~g~~~~~a~~-~~G~~v~~~~~~~~~~~~~~~~-~~~~~~~~d~~~l~~~~~~~d~v~ 67 (380)
T 3ax6_A 2 KKIGIIGG-GQLGKMMTLEAK-KMGFYVIVLDPTPRSPAGQVAD-EQIVAGFFDSERIEDLVKGSDVTT 67 (380)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HTTCEEEEEESSTTCTTGGGSS-EEEECCTTCHHHHHHHHHTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-HCCCEEEEEeCCCCCchhhhCc-eEEECCCCCHHHHHHHHhcCCEEE
Confidence 68999995 899999999998 6899999998765432111111 356689999999888887777433
No 415
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.05 E-value=0.0024 Score=54.75 Aligned_cols=39 Identities=21% Similarity=0.223 Sum_probs=34.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|+|+||+|.||..+++.+. ..|.+|+++++++.+.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~ 186 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLK-MKGAHTIAVASTDEKL 186 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-HTTCEEEEEESSHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHH
Confidence 46799999999999999999887 6889999999976553
No 416
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.00 E-value=0.0022 Score=54.74 Aligned_cols=103 Identities=15% Similarity=0.038 Sum_probs=63.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc-----cc------CCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA-----IQ------SSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~-----~~------~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
+||.|+|| |.+|..++..|. ..|+ +|+++++++.+.. .. ....++... .| . +.++++|.|
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la-~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~~aD~V 76 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIV-QKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDLAGADVV 76 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCEE
Confidence 58999997 999999999998 5777 8999998875432 00 112222211 22 2 467888866
Q ss_pred eEEeecccccCCh---HHHHHHHHHHHHHHHHHHHHHhhccCCccE
Q 042242 97 THIFWVTWASQFA---SDMHKCCEQNKAMMCNALNAILPRAKALKH 139 (303)
Q Consensus 97 ~~~~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~ 139 (303)
+..+..+...... ....+....|..-...+.+.+.+.++....
T Consensus 77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~i 122 (322)
T 1t2d_A 77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFI 122 (322)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6665432211110 001235778888888888888877655433
No 417
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.99 E-value=0.0066 Score=50.80 Aligned_cols=36 Identities=28% Similarity=0.419 Sum_probs=32.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
++|.|+| .|.+|+.+++.|. ..|++|++.+|++.+.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~-~~G~~V~~~dr~~~~~ 37 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLV-KAGCSVTIWNRSPEKA 37 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSSGGGG
T ss_pred CEEEEEe-ecHHHHHHHHHHH-HCCCeEEEEcCCHHHH
Confidence 6899999 6999999999999 6899999999987654
No 418
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.99 E-value=0.0072 Score=52.33 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=30.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
..+|.|.||+|++|+.+++.|.+...++|+++.++.
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~ 51 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR 51 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch
Confidence 358999999999999999999855567888887653
No 419
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.94 E-value=0.0018 Score=55.36 Aligned_cols=39 Identities=18% Similarity=0.240 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|+|+||+|.||..+++.+. ..|.+|+++++++.+.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~ 178 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAK-ALGAKLIGTVSSPEKA 178 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEESSHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHH
Confidence 46799999999999999999887 5788999999876653
No 420
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.93 E-value=0.0076 Score=51.91 Aligned_cols=36 Identities=25% Similarity=0.387 Sum_probs=29.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
+++|.|.||||++|+.+++.|.....++++++.++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~ 39 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR 39 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch
Confidence 368999999999999999999855567888877643
No 421
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.89 E-value=0.018 Score=47.64 Aligned_cols=56 Identities=21% Similarity=0.143 Sum_probs=43.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
...+++++|+|+++.+|+.++..|+ ..|..|+++.|+.. .+.+.++.+|.|+...+
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~-~~gAtVtv~h~~t~--------------------~L~~~~~~ADIVI~Avg 212 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLL-NAGATVSVCHIKTK--------------------DLSLYTRQADLIIVAAG 212 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHH-HTTCEEEEECTTCS--------------------CHHHHHTTCSEEEECSS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCch--------------------hHHHHhhcCCEEEECCC
Confidence 3467999999999999999999998 67889998876531 25678888886555543
No 422
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.89 E-value=0.0048 Score=51.90 Aligned_cols=37 Identities=24% Similarity=0.469 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
|.++|.|+| .|.+|+.++..|. ..|++|++.+|++.+
T Consensus 4 M~m~i~iiG-~G~~G~~~a~~l~-~~g~~V~~~~~~~~~ 40 (299)
T 1vpd_A 4 MTMKVGFIG-LGIMGKPMSKNLL-KAGYSLVVSDRNPEA 40 (299)
T ss_dssp --CEEEEEC-CSTTHHHHHHHHH-HTTCEEEEECSCHHH
T ss_pred ccceEEEEC-chHHHHHHHHHHH-hCCCEEEEEeCCHHH
Confidence 446999999 7999999999998 578999999998654
No 423
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.88 E-value=0.0072 Score=51.49 Aligned_cols=38 Identities=29% Similarity=0.410 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
+.++|.|+| .|.+|..+++.|. ..|++|++.+|++.+.
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~-~~G~~V~~~dr~~~~~ 67 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLC-EAGYALQVWNRTPARA 67 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHH-HTTCEEEEECSCHHHH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHH-hCCCeEEEEcCCHHHH
Confidence 346999999 6999999999999 6899999999987653
No 424
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.88 E-value=0.0066 Score=51.13 Aligned_cols=37 Identities=19% Similarity=0.075 Sum_probs=33.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.++|.|+| .|.+|..+++.|. ..||+|++.+|++.+.
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~-~~G~~V~~~dr~~~~~ 51 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMT-EWPGGVTVYDIRIEAM 51 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHT-TSTTCEEEECSSTTTS
T ss_pred CCeEEEEC-cCHHHHHHHHHHH-HCCCeEEEEeCCHHHH
Confidence 46899999 7999999999998 6899999999988764
No 425
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.86 E-value=0.012 Score=51.00 Aligned_cols=72 Identities=13% Similarity=-0.005 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-c-CCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-Q-SSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~-~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
.+.+|+|+|+ |.||..+++.+. ..|.+|+++++++.+... . ..+... ..|..+.+.+.+...++|.|+.+++
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~-~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAK-AFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVS 260 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-HTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCC
Confidence 4579999995 999999999887 678899999988765431 1 334432 2577776666666556666666644
No 426
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.84 E-value=0.011 Score=48.29 Aligned_cols=63 Identities=13% Similarity=0.211 Sum_probs=43.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTL 92 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~ 92 (303)
++|.|+|++|.+|+.+++.+.+..+++|.++..+..... ....+.. +.+|.+.++...+.+..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~ 64 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEF 64 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHH
Confidence 379999999999999999997556899776655433221 1111333 55788888877665543
No 427
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=95.84 E-value=0.051 Score=47.43 Aligned_cols=63 Identities=21% Similarity=0.283 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~ 92 (303)
+.++|+|+|+ |.+|+.+++.+. ..|++|++++..+........ -.++.+|..|.+.+.+.++.
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~-~~G~~v~~~~~~~~~~~~~~~-d~~~~~~~~d~~~l~~~~~~ 72 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQ-RLGVEVIAVDRYADAPAMHVA-HRSHVINMLDGDALRRVVEL 72 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHH-TTTCEEEEEESSTTCGGGGGS-SEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-HcCCEEEEEECCCCCchhhhc-cceEECCCCCHHHHHHHHHH
Confidence 4579999985 899999999998 689999999886543221111 13556788898888887763
No 428
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.80 E-value=0.0035 Score=53.90 Aligned_cols=39 Identities=15% Similarity=0.274 Sum_probs=33.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|+|+||+|.||..+++.+. ..|.+|+++++++.+.
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~ 182 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQ-ILNFRLIAVTRNNKHT 182 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEESSSTTH
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-HcCCEEEEEeCCHHHH
Confidence 46799999999999999998887 6788999999987654
No 429
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.79 E-value=0.017 Score=49.26 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=45.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++.... .+... ....++.++++.+|.|+
T Consensus 134 ~l~gktvGIiG-lG~IG~~vA~~l~-~~G~~V~~~dr~~~~~~----~~~~~----~~~~~l~ell~~aDvV~ 196 (324)
T 3evt_A 134 TLTGQQLLIYG-TGQIGQSLAAKAS-ALGMHVIGVNTTGHPAD----HFHET----VAFTATADALATANFIV 196 (324)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEESSCCCCT----TCSEE----EEGGGCHHHHHHCSEEE
T ss_pred cccCCeEEEEC-cCHHHHHHHHHHH-hCCCEEEEECCCcchhH----hHhhc----cccCCHHHHHhhCCEEE
Confidence 45678999999 7999999999998 68999999999865422 11111 11235677888888533
No 430
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.77 E-value=0.012 Score=48.19 Aligned_cols=66 Identities=9% Similarity=0.108 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
.+ +|+|+| +|..|+.++..|+ ..|. +|++.+|++.+.......+... . .+++.+.++++|.|+++.
T Consensus 108 ~~-~vliiG-aGg~a~ai~~~L~-~~G~~~I~v~nR~~~ka~~la~~~~~~--~---~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 108 KE-PVVVVG-AGGAARAVIYALL-QMGVKDIWVVNRTIERAKALDFPVKIF--S---LDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CS-SEEEEC-CSHHHHHHHHHHH-HTTCCCEEEEESCHHHHHTCCSSCEEE--E---GGGHHHHHHTCSEEEECS
T ss_pred CC-eEEEEC-cHHHHHHHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHcccC--C---HHHHHhhhcCCCEEEECC
Confidence 45 899999 4999999999999 5788 7999999877654323333322 2 234667788888777663
No 431
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.70 E-value=0.011 Score=49.58 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=48.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
...+++|+|+| .|.||+.+++.|. ..|.+|++.+|++.+.. ....++..+ + .+++.+.++.+|.|+..
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~-~~G~~V~~~dr~~~~~~~~~~~g~~~~--~---~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFA-ALGAKVKVGARESDLLARIAEMGMEPF--H---ISKAAQELRDVDVCINT 220 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHTTSEEE--E---GGGHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHH-hCCCEEEEEECCHHHHHHHHHCCCeec--C---hhhHHHHhcCCCEEEEC
Confidence 34578999999 6999999999998 67889999999865422 112234432 1 24567788888854444
No 432
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.68 E-value=0.022 Score=48.51 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=46.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++.... .+... ....++.++++.+|.|
T Consensus 137 ~l~g~tvGIIG-lG~IG~~vA~~l~-~~G~~V~~~dr~~~~~~----~~~~~----~~~~~l~ell~~aDvV 198 (324)
T 3hg7_A 137 GLKGRTLLILG-TGSIGQHIAHTGK-HFGMKVLGVSRSGRERA----GFDQV----YQLPALNKMLAQADVI 198 (324)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSSCCCCT----TCSEE----ECGGGHHHHHHTCSEE
T ss_pred ccccceEEEEE-ECHHHHHHHHHHH-hCCCEEEEEcCChHHhh----hhhcc----cccCCHHHHHhhCCEE
Confidence 45678999999 7999999999998 68999999999874321 11111 1235678899999953
No 433
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=95.67 E-value=0.013 Score=49.52 Aligned_cols=63 Identities=17% Similarity=0.144 Sum_probs=45.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++.+......++.. . ++.++++.+|.|+
T Consensus 139 ~l~g~~vgIiG-~G~IG~~~A~~l~-~~G~~V~~~d~~~~~~~~~~~g~~~-----~---~l~ell~~aDvV~ 201 (307)
T 1wwk_A 139 ELEGKTIGIIG-FGRIGYQVAKIAN-ALGMNILLYDPYPNEERAKEVNGKF-----V---DLETLLKESDVVT 201 (307)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSSCCHHHHHHTTCEE-----C---CHHHHHHHCSEEE
T ss_pred ccCCceEEEEc-cCHHHHHHHHHHH-HCCCEEEEECCCCChhhHhhcCccc-----c---CHHHHHhhCCEEE
Confidence 44678999999 7999999999998 6899999999987652211223332 1 3567888888533
No 434
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=95.66 E-value=0.019 Score=49.32 Aligned_cols=62 Identities=16% Similarity=0.099 Sum_probs=45.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
...+++|.|+| .|.||+.+++.|. .-|++|++.+|.+.+..... +++.. +++.++++.+|.|
T Consensus 170 ~l~gktvGIIG-lG~IG~~vA~~l~-~~G~~V~~~dr~~~~~~~~~-g~~~~-------~~l~ell~~sDvV 231 (345)
T 4g2n_A 170 GLTGRRLGIFG-MGRIGRAIATRAR-GFGLAIHYHNRTRLSHALEE-GAIYH-------DTLDSLLGASDIF 231 (345)
T ss_dssp CCTTCEEEEES-CSHHHHHHHHHHH-TTTCEEEEECSSCCCHHHHT-TCEEC-------SSHHHHHHTCSEE
T ss_pred ccCCCEEEEEE-eChhHHHHHHHHH-HCCCEEEEECCCCcchhhhc-CCeEe-------CCHHHHHhhCCEE
Confidence 44678999999 7999999999998 78999999999864322111 33221 3567888888853
No 435
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.65 E-value=0.0083 Score=52.07 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecC------------------CCHHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDL------------------LNPLDIK 87 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~------------------~~~~~l~ 87 (303)
.+++|+|+|+ |-+|..+++.|. ..|.+|++.+|++.+.. ....+.+++..|. .+.+.+.
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~-~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAK-RLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHH-HHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 4679999995 999999999998 67889999999986532 2223444443221 1234678
Q ss_pred HHHhccCceeEEe
Q 042242 88 RKLTLLEDVTHIF 100 (303)
Q Consensus 88 ~~~~~~~~V~~~~ 100 (303)
+.++++|.||.++
T Consensus 261 e~l~~aDIVI~tv 273 (381)
T 3p2y_A 261 DAITKFDIVITTA 273 (381)
T ss_dssp HHHTTCSEEEECC
T ss_pred HHHhcCCEEEECC
Confidence 8889999766654
No 436
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.65 E-value=0.0091 Score=49.56 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
..+++|+|+|+ |.+|+.++..|+ ..|.+|++.+|+..+
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~-~~G~~V~v~~R~~~~ 154 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLL-SLDCAVTITNRTVSR 154 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHH-HTTCEEEEECSSHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-HcCCEEEEEECCHHH
Confidence 35689999997 789999999999 577899999998654
No 437
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.63 E-value=0.012 Score=49.68 Aligned_cols=68 Identities=16% Similarity=0.139 Sum_probs=47.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
...+++|+|+| .|.||+.+++.|. ..|.+|++.+|++.+.. ....+++.+ + ..++.+.++.+|.|+..
T Consensus 154 ~l~g~~v~IiG-~G~iG~~~a~~l~-~~G~~V~~~d~~~~~~~~~~~~g~~~~--~---~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 154 TIHGSQVAVLG-LGRTGMTIARTFA-ALGANVKVGARSSAHLARITEMGLVPF--H---TDELKEHVKDIDICINT 222 (300)
T ss_dssp CSTTSEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHTTCEEE--E---GGGHHHHSTTCSEEEEC
T ss_pred CCCCCEEEEEc-ccHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHCCCeEE--c---hhhHHHHhhCCCEEEEC
Confidence 34578999999 5999999999998 67899999999875432 111234332 1 24577788888854444
No 438
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.62 E-value=0.029 Score=46.42 Aligned_cols=56 Identities=20% Similarity=0.152 Sum_probs=43.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
...+++++|+|++|.+|+.++..|+ ..|..|+++.++.. .+.+.++.+|.|+....
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~-~~gAtVtv~hs~T~--------------------~L~~~~~~ADIVI~Avg 213 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELL-LGGCTVTVTHRFTR--------------------DLADHVSRADLVVVAAG 213 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHH-HTTCEEEEECTTCS--------------------CHHHHHHTCSEEEECCC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHH-HCCCeEEEEeCCCc--------------------CHHHHhccCCEEEECCC
Confidence 3467999999999999999999998 67889998866431 25678888886655543
No 439
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.59 E-value=0.028 Score=46.93 Aligned_cols=55 Identities=22% Similarity=0.168 Sum_probs=43.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHH--HHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIK--RKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~--~~~~~~~~V~~~~~ 101 (303)
..+++++|+|++|.+|+.++..|+ ..|..|+++.|+.. .+. +.++.+|.||....
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~-~~gAtVtv~~~~T~--------------------~l~l~~~~~~ADIVI~Avg 219 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLM-KENATVTIVHSGTS--------------------TEDMIDYLRTADIVIAAMG 219 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHH-HTTCEEEEECTTSC--------------------HHHHHHHHHTCSEEEECSC
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCCC--------------------CchhhhhhccCCEEEECCC
Confidence 467899999999999999999999 68889998887532 233 78889986666544
No 440
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.59 E-value=0.0035 Score=54.02 Aligned_cols=39 Identities=13% Similarity=0.227 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~ 66 (303)
.+++|+|+|++|.||..+++.+. .. |++|+++++++.+.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~-~~~Ga~Vi~~~~~~~~~ 209 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAK-AVSGATIIGVDVREEAV 209 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HHTCCEEEEEESSHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHH-HcCCCeEEEEcCCHHHH
Confidence 46799999999999999999887 56 88999999876553
No 441
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.57 E-value=0.031 Score=46.29 Aligned_cols=56 Identities=23% Similarity=0.236 Sum_probs=43.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
...+++++|+|++|.+|+.++..|+ ..|..|+++.|+.. .+.+.++.+|.|+...+
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~-~~gAtVtv~hs~t~--------------------~L~~~~~~ADIVI~Avg 213 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLL-NAKATVTTCHRFTT--------------------DLKSHTTKADILIVAVG 213 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHH-HTTCEEEEECTTCS--------------------SHHHHHTTCSEEEECCC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHH-HCCCeEEEEeCCch--------------------hHHHhcccCCEEEECCC
Confidence 3467899999999999999999998 67888988766521 36678888886665543
No 442
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=95.56 E-value=0.013 Score=49.16 Aligned_cols=60 Identities=13% Similarity=0.020 Sum_probs=45.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++.+.. .+. ..+++.++++.+|.|+
T Consensus 119 ~l~g~tvGIIG-lG~IG~~vA~~l~-~~G~~V~~~dr~~~~~~----~~~-------~~~~l~ell~~aDiV~ 178 (290)
T 3gvx_A 119 LLYGKALGILG-YGGIGRRVAHLAK-AFGMRVIAYTRSSVDQN----VDV-------ISESPADLFRQSDFVL 178 (290)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHH-HHTCEEEEECSSCCCTT----CSE-------ECSSHHHHHHHCSEEE
T ss_pred eeecchheeec-cCchhHHHHHHHH-hhCcEEEEEeccccccc----ccc-------ccCChHHHhhccCeEE
Confidence 45678999999 7999999999998 68999999999875421 111 1125677888888533
No 443
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.55 E-value=0.017 Score=50.61 Aligned_cols=73 Identities=12% Similarity=0.139 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEec----------------CCC------H
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCD----------------LLN------P 83 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D----------------~~~------~ 83 (303)
.+.+|+|+|+ |-+|...++.+. ..|.+|++.++++.... ....+..++..+ +++ .
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~-~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATAR-RLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-HTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 4579999995 999999999998 68999999999986532 112244443332 122 3
Q ss_pred HHHHHHHhccCceeEEee
Q 042242 84 LDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 84 ~~l~~~~~~~~~V~~~~~ 101 (303)
+.+.+.++++|.||.++.
T Consensus 267 ~~l~e~l~~aDVVI~tvl 284 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTAL 284 (405)
T ss_dssp HHHHHHHHTCSEEEECCC
T ss_pred hHHHHHhcCCCEEEECCc
Confidence 478889999997777643
No 444
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.55 E-value=0.028 Score=46.26 Aligned_cols=54 Identities=22% Similarity=0.187 Sum_probs=43.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
..+++++|.|+++.+|+.++..|+ ..|..|+++.|+. ..+.+.++.+|.|+...
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~-~~gAtVtv~~~~t--------------------~~L~~~~~~ADIVI~Av 201 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLL-NRNYTVSVCHSKT--------------------KDIGSMTRSSKIVVVAV 201 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHH-HTTCEEEEECTTC--------------------SCHHHHHHHSSEEEECS
T ss_pred cCCCEEEEEcCChHHHHHHHHHHH-HCCCeEEEEeCCc--------------------ccHHHhhccCCEEEECC
Confidence 467999999999999999999999 6788999887643 23567888888655553
No 445
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.53 E-value=0.012 Score=50.34 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=29.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
.+|.|+||||++|+.+++.|.....+++..+.++.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~ 39 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA 39 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence 68999999999999999999855788987776544
No 446
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.51 E-value=0.043 Score=46.36 Aligned_cols=102 Identities=19% Similarity=0.130 Sum_probs=65.8
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc-----c------cCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 30 VAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA-----I------QSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~-----~------~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
||.|+|| |.+|..++..|+ ..++ +|.++++++.+.. . ......+... .|. +.++++|.|+
T Consensus 1 KI~IiGa-G~vG~~~a~~l~-~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~~aD~Vi 72 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLM-MRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSY----EDMRGSDIVL 72 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHH-HHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTCSEEE
T ss_pred CEEEECc-CHHHHHHHHHHH-hCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCH----HHhCCCCEEE
Confidence 5899997 999999999988 4566 6999999875432 0 1112333321 121 3688888666
Q ss_pred EEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 98 HIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
..+...... .....+....|..-...+++.+.+.++....++
T Consensus 73 ~~ag~~~k~--G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv 114 (308)
T 2d4a_B 73 VTAGIGRKP--GMTREQLLEANANTMADLAEKIKAYAKDAIVVI 114 (308)
T ss_dssp ECCSCCCCS--SCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 665443222 222234789999999999999988765543333
No 447
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.51 E-value=0.0062 Score=51.55 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
+.++|.|+| .|.+|..+++.|+ +.|++|++.+|++.+.
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~-~~G~~V~~~dr~~~~~ 45 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLL-KQGKRVAIWNRSPGKA 45 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHH-HTTCCEEEECSSHHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCHHHH
Confidence 456899999 7999999999999 6899999999987653
No 448
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.50 E-value=0.022 Score=48.28 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=43.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++.+.. .+. .++.++++.+|.|
T Consensus 141 ~l~g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~~~d~~~~~~~----------~~~---~~l~ell~~aDvV 197 (311)
T 2cuk_A 141 DLQGLTLGLVG-MGRIGQAVAKRAL-AFGMRVVYHARTPKPLP----------YPF---LSLEELLKEADVV 197 (311)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSSCCSSS----------SCB---CCHHHHHHHCSEE
T ss_pred CCCCCEEEEEE-ECHHHHHHHHHHH-HCCCEEEEECCCCcccc----------ccc---CCHHHHHhhCCEE
Confidence 44678999999 7999999999998 68999999998765421 222 2466788888853
No 449
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=95.50 E-value=0.02 Score=49.05 Aligned_cols=63 Identities=21% Similarity=0.171 Sum_probs=45.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++.+......++.. . ++.++++.+|.|+
T Consensus 162 ~l~g~tvgIIG-lG~IG~~vA~~l~-~~G~~V~~~d~~~~~~~~~~~g~~~-----~---~l~ell~~aDvV~ 224 (335)
T 2g76_A 162 ELNGKTLGILG-LGRIGREVATRMQ-SFGMKTIGYDPIISPEVSASFGVQQ-----L---PLEEIWPLCDFIT 224 (335)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHH-TTTCEEEEECSSSCHHHHHHTTCEE-----C---CHHHHGGGCSEEE
T ss_pred CCCcCEEEEEe-ECHHHHHHHHHHH-HCCCEEEEECCCcchhhhhhcCcee-----C---CHHHHHhcCCEEE
Confidence 45678999999 7999999999998 6899999999876542211223332 1 3667888888533
No 450
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=95.49 E-value=0.017 Score=49.03 Aligned_cols=63 Identities=13% Similarity=0.028 Sum_probs=45.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++.+......++.. . ++.++++.+|.|+
T Consensus 139 ~l~g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~~~d~~~~~~~~~~~g~~~-----~---~l~ell~~aDvVv 201 (313)
T 2ekl_A 139 ELAGKTIGIVG-FGRIGTKVGIIAN-AMGMKVLAYDILDIREKAEKINAKA-----V---SLEELLKNSDVIS 201 (313)
T ss_dssp CCTTCEEEEES-CSHHHHHHHHHHH-HTTCEEEEECSSCCHHHHHHTTCEE-----C---CHHHHHHHCSEEE
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHH-HCCCEEEEECCCcchhHHHhcCcee-----c---CHHHHHhhCCEEE
Confidence 44678999999 7999999999998 6899999999987653221223432 1 3557788888533
No 451
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.44 E-value=0.051 Score=43.05 Aligned_cols=36 Identities=22% Similarity=0.300 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE 64 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 64 (303)
..++|.|+| .|.+|+.++..|. +.|++|++.+|++.
T Consensus 18 ~~~~I~iiG-~G~mG~~la~~l~-~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFG-KGNMGQAIGHNFE-IAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECTTCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEcCCHH
Confidence 346899999 7999999999998 68899999988753
No 452
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.41 E-value=0.0053 Score=51.78 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=31.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
++|.|+| .|.+|..+++.|. ..|++|++.+|++.+.
T Consensus 4 ~~I~iiG-~G~mG~~~a~~l~-~~G~~V~~~d~~~~~~ 39 (302)
T 2h78_A 4 KQIAFIG-LGHMGAPMATNLL-KAGYLLNVFDLVQSAV 39 (302)
T ss_dssp CEEEEEC-CSTTHHHHHHHHH-HTTCEEEEECSSHHHH
T ss_pred CEEEEEe-ecHHHHHHHHHHH-hCCCeEEEEcCCHHHH
Confidence 6899999 7999999999999 6899999999987653
No 453
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.39 E-value=0.0071 Score=52.54 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
.+++|+|+|+ |.||..+++.+. ..|.+|+++++++
T Consensus 180 ~g~~VlV~Ga-G~vG~~~~q~a~-~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 180 NCRKVLVVGT-GPIGVLFTLLFR-TYGLEVWMANRRE 214 (366)
T ss_dssp TTCEEEEESC-HHHHHHHHHHHH-HHTCEEEEEESSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-hCCCEEEEEeCCc
Confidence 3689999999 999999999887 5788999999987
No 454
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.36 E-value=0.026 Score=50.56 Aligned_cols=65 Identities=18% Similarity=0.235 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHH-HhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRK-LTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~-~~~~~ 94 (303)
..++|+|.| .|.||.++++.|. .+++|.++.+++.++. ...++..++.+|.+|.+-|.+. +..+|
T Consensus 234 ~~~~v~I~G-gG~ig~~lA~~L~--~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D 302 (461)
T 4g65_A 234 PYRRIMIVG-GGNIGASLAKRLE--QTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVD 302 (461)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHT--TTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCS
T ss_pred cccEEEEEc-chHHHHHHHHHhh--hcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhc
Confidence 357999999 6999999999985 4689999999887653 2346788999999999977554 55555
No 455
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=95.32 E-value=0.027 Score=50.26 Aligned_cols=69 Identities=13% Similarity=0.074 Sum_probs=46.5
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEe------cCCCHHHHHHHHhccC
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISC------DLLNPLDIKRKLTLLE 94 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~------D~~~~~~l~~~~~~~~ 94 (303)
+.+|.++|||+| .|.+|..+++.+. +.|++|++++..+.... ....+-.+... +..|.+.+.++++..+
T Consensus 2 n~m~~~kiLI~g-~g~~a~~i~~aa~-~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~ 78 (446)
T 3ouz_A 2 NAMEIKSILIAN-RGEIALRALRTIK-EMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAE 78 (446)
T ss_dssp CTTCCCEEEECC-CHHHHHHHHHHHH-HTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHT
T ss_pred CccccceEEEEC-CCHHHHHHHHHHH-HcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhC
Confidence 456789999999 6889999999998 68999999875443211 11112222222 6677778887776543
No 456
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.32 E-value=0.025 Score=49.43 Aligned_cols=72 Identities=14% Similarity=0.137 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCC----------------------CH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLL----------------------NP 83 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~----------------------~~ 83 (303)
.+++|+|+| .|-+|..+++.+. ..|.+|++.+|++.+.. ....+..++..|.. +.
T Consensus 171 ~g~~V~ViG-aG~iG~~aa~~a~-~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFG-VGVAGLQAIATAK-RLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 578999999 5999999999998 67889999999876532 11123333211221 12
Q ss_pred HHHHHHHhccCceeEEe
Q 042242 84 LDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 84 ~~l~~~~~~~~~V~~~~ 100 (303)
+.+.+.++++|.|+++.
T Consensus 249 ~~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTA 265 (384)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhCCCCEEEECC
Confidence 33777888888777764
No 457
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.30 E-value=0.011 Score=52.74 Aligned_cols=72 Identities=25% Similarity=0.195 Sum_probs=47.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC---eEEEEecCCcccc-ccCCCeEEEEecC--CCHH-HHHHHHhccCceeEEe
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW---KVYGIARKPEITA-IQSSSYCFISCDL--LNPL-DIKRKLTLLEDVTHIF 100 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~-~~~~~~~~~~~D~--~~~~-~l~~~~~~~~~V~~~~ 100 (303)
+++|+|+| .|.||+.++..|.+..++ +|++.+....... ....++.+...++ .|.+ .+.+++++.|.|++++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s 91 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVS 91 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECC
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECC
Confidence 46899999 799999999999865666 5888887654322 1112455555555 4443 3556776656677753
No 458
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.30 E-value=0.12 Score=41.92 Aligned_cols=63 Identities=21% Similarity=0.282 Sum_probs=41.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEE-EecCCccc-------cc-cCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYG-IARKPEIT-------AI-QSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~-~~r~~~~~-------~~-~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
++||.|+|+ |.+|+.+++.+.+..+ ++.+ ++|++... .. ...+..+ .+|++.++.+.+.++ ..
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~~~~~gv~v~~dl~~l~~~DV-vIDft~p~a~~~~~~-l~ 74 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTPKATTPYQQYQHIADVKGADV-AIDFSNPNLLFPLLD-ED 74 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSCC--CCSCBCSCTTTCTTCSE-EEECSCHHHHHHHHT-SC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCccccCCCceeCCHHHHhCCCE-EEEeCChHHHHHHHH-Hh
Confidence 369999998 9999999999985455 8655 56654311 00 0012333 368899988877776 44
No 459
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.30 E-value=0.027 Score=48.80 Aligned_cols=34 Identities=18% Similarity=0.354 Sum_probs=25.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC---eEEEEecC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW---KVYGIARK 62 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~ 62 (303)
++|.|.||||++|+.+++.|+...++ +++.+..+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~ 38 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS 38 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence 58999999999999999955535544 45666554
No 460
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=95.29 E-value=0.02 Score=49.84 Aligned_cols=72 Identities=10% Similarity=0.043 Sum_probs=44.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHH--hccCceeEEee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKL--TLLEDVTHIFW 101 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~--~~~~~V~~~~~ 101 (303)
.+.+|+|+||+|.||..+++.+. ..|.+|+++++. .+.. ....+...+ .|..+.+..+++. .++|.|+.+++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~-~~Ga~Vi~~~~~-~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~g 257 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMK-AWDAHVTAVCSQ-DASELVRKLGADDV-IDYKSGSVEEQLKSLKPFDFILDNVG 257 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECG-GGHHHHHHTTCSEE-EETTSSCHHHHHHTSCCBSEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEeCh-HHHHHHHHcCCCEE-EECCchHHHHHHhhcCCCCEEEECCC
Confidence 46799999999999999998887 678899988843 3322 222233322 3554433222222 24565666543
No 461
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=95.28 E-value=0.01 Score=51.11 Aligned_cols=63 Identities=14% Similarity=0.096 Sum_probs=45.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
...+++|.|.| .|.||+.+++.|. ..|++|++.+|+.........+++.. +++.++++.+|.|
T Consensus 157 ~l~g~tvGIIG-lG~IG~~vA~~l~-~~G~~V~~~d~~~~~~~~~~~g~~~~-------~~l~ell~~aDiV 219 (352)
T 3gg9_A 157 VLKGQTLGIFG-YGKIGQLVAGYGR-AFGMNVLVWGRENSKERARADGFAVA-------ESKDALFEQSDVL 219 (352)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSHHHHHHHHHTTCEEC-------SSHHHHHHHCSEE
T ss_pred cCCCCEEEEEe-ECHHHHHHHHHHH-hCCCEEEEECCCCCHHHHHhcCceEe-------CCHHHHHhhCCEE
Confidence 44678999999 7999999999998 68999999998753221122344321 2466788888853
No 462
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.27 E-value=0.017 Score=48.13 Aligned_cols=65 Identities=18% Similarity=0.259 Sum_probs=44.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
.+++++|+|+ |..|+.++..|. ..|. +|+++.|+..+.......+..+ + .+.+.+ + ++|.||++.
T Consensus 121 ~~k~vlvlGa-GGaaraia~~L~-~~G~~~v~v~nRt~~ka~~La~~~~~~--~---~~~l~~-l-~~DivInaT 186 (282)
T 3fbt_A 121 KNNICVVLGS-GGAARAVLQYLK-DNFAKDIYVVTRNPEKTSEIYGEFKVI--S---YDELSN-L-KGDVIINCT 186 (282)
T ss_dssp TTSEEEEECS-STTHHHHHHHHH-HTTCSEEEEEESCHHHHHHHCTTSEEE--E---HHHHTT-C-CCSEEEECS
T ss_pred cCCEEEEECC-cHHHHHHHHHHH-HcCCCEEEEEeCCHHHHHHHHHhcCcc--c---HHHHHh-c-cCCEEEECC
Confidence 5789999995 889999999998 5788 7999999887654323334322 1 233333 4 566666663
No 463
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.27 E-value=0.0079 Score=50.32 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=32.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
++|.|+| .|.+|..+++.|. ..||+|++.+|++.+.
T Consensus 2 ~~I~iiG-~G~mG~~~a~~l~-~~G~~V~~~dr~~~~~ 37 (287)
T 3pdu_A 2 TTYGFLG-LGIMGGPMAANLV-RAGFDVTVWNRNPAKC 37 (287)
T ss_dssp CCEEEEC-CSTTHHHHHHHHH-HHTCCEEEECSSGGGG
T ss_pred CeEEEEc-cCHHHHHHHHHHH-HCCCeEEEEcCCHHHH
Confidence 5799999 7999999999999 6799999999987654
No 464
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.23 E-value=0.0037 Score=55.79 Aligned_cols=36 Identities=28% Similarity=0.308 Sum_probs=31.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
++|.|+| +|++|..++..|. ..|++|++++|++.+.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la-~~G~~V~~~d~~~~~~ 36 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLS-ARGHEVIGVDVSSTKI 36 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHH-HTTCEEEEECSCHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEECCHHHH
Confidence 3799999 7999999999998 6899999999986653
No 465
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.19 E-value=0.016 Score=47.23 Aligned_cols=39 Identities=26% Similarity=0.286 Sum_probs=32.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
..+.++|.|+| +|.+|+.+++.|. ..|++|++.+|++.+
T Consensus 16 ~~~~~kIgiIG-~G~mG~alA~~L~-~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 16 YFQGMKIAVLG-TGTVGRTMAGALA-DLGHEVTIGTRDPKA 54 (245)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEESCHHH
T ss_pred ccCCCeEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCChhh
Confidence 44568999998 8999999999999 689999999998765
No 466
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=95.19 E-value=0.019 Score=48.82 Aligned_cols=64 Identities=16% Similarity=0.162 Sum_probs=45.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec-CCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIAR-KPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+| ++........++.. . +++.++++.+|.|+
T Consensus 143 ~l~g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~~~d~~~~~~~~~~~~g~~~--~-----~~l~ell~~aDvVi 207 (320)
T 1gdh_A 143 KLDNKTLGIYG-FGSIGQALAKRAQ-GFDMDIDYFDTHRASSSDEASYQATF--H-----DSLDSLLSVSQFFS 207 (320)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHH-TTTCEEEEECSSCCCHHHHHHHTCEE--C-----SSHHHHHHHCSEEE
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEECCCCcChhhhhhcCcEE--c-----CCHHHHHhhCCEEE
Confidence 44678999999 7999999999998 68999999999 76542111123322 1 13567888888433
No 467
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.18 E-value=0.014 Score=50.14 Aligned_cols=71 Identities=13% Similarity=0.079 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHH---HHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPL---DIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~---~l~~~~~~~~~V~~~~ 100 (303)
.+++|+|+|+ |.||..+++.+. ..|.+|++++|++.+.. ....+... ..|..+.+ .+.+...++|.|++++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~-~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADL-VVNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHTTCSE-EECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHCCCCE-EecCCCccHHHHHHHHhCCCCEEEECC
Confidence 4579999999 669999999887 67889999998866533 11223332 24665432 2333333455555554
No 468
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.17 E-value=0.13 Score=43.22 Aligned_cols=99 Identities=10% Similarity=-0.005 Sum_probs=64.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
.+||.|+|| |.+|..++..|+ ..|+ +|.++++++.... ...++++. ..| + +.++++|.|+.
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~-~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d------~-~~l~~aD~Vi~ 83 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAIS-AKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SKD------L-SASAHSKVVIF 83 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-HHTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ESC------G-GGGTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eCC------H-HHHCCCCEEEE
Confidence 369999995 999999999998 5677 8999999864110 11123333 122 2 45888886666
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccE
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKH 139 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~ 139 (303)
.++..- ......+....|..-...+++.+.+.++.-..
T Consensus 84 aag~~~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~i 121 (303)
T 2i6t_A 84 TVNSLG---SSQSYLDVVQSNVDMFRALVPALGHYSQHSVL 121 (303)
T ss_dssp CCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred cCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 654431 22233457889999999999999887655443
No 469
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.17 E-value=0.019 Score=49.18 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=28.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhc--CCCeEEEEec
Q 042242 28 KNVAVIFGVTGLVGKELARRLIST--ANWKVYGIAR 61 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~--~g~~V~~~~r 61 (303)
+.+|.|.||||++|+.+++.|+.. ..++|+++..
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s 38 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLAS 38 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEEC
Confidence 368999999999999999999844 4577777764
No 470
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.17 E-value=0.029 Score=48.02 Aligned_cols=59 Identities=14% Similarity=0.026 Sum_probs=44.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++... .++.. ..++.++++.+|.|
T Consensus 168 ~l~gktiGIIG-lG~IG~~vA~~l~-~~G~~V~~~dr~~~~~----~~~~~-------~~sl~ell~~aDvV 226 (340)
T 4dgs_A 168 SPKGKRIGVLG-LGQIGRALASRAE-AFGMSVRYWNRSTLSG----VDWIA-------HQSPVDLARDSDVL 226 (340)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHH-TTTCEEEEECSSCCTT----SCCEE-------CSSHHHHHHTCSEE
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEcCCcccc----cCcee-------cCCHHHHHhcCCEE
Confidence 45678999999 7999999999998 7899999999986542 11211 13567889999853
No 471
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.16 E-value=0.02 Score=48.65 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
|+++|.|+| +|-+|..++..|. ..|++|++++|++
T Consensus 1 M~mkI~IiG-aGaiG~~~a~~L~-~~g~~V~~~~r~~ 35 (320)
T 3i83_A 1 MSLNILVIG-TGAIGSFYGALLA-KTGHCVSVVSRSD 35 (320)
T ss_dssp --CEEEEES-CCHHHHHHHHHHH-HTTCEEEEECSTT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-hCCCeEEEEeCCh
Confidence 457999999 6999999999998 6789999999986
No 472
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=95.13 E-value=0.035 Score=47.61 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=44.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
...+++|.|.| .|.||+.+++.|. .-|++|++.+|++.... ...+.. . ++.++++.+|.|
T Consensus 145 ~l~gktvgIiG-lG~IG~~vA~~l~-~~G~~V~~~d~~~~~~~--~~~~~~-----~---~l~ell~~aDvV 204 (343)
T 2yq5_A 145 EIYNLTVGLIG-VGHIGSAVAEIFS-AMGAKVIAYDVAYNPEF--EPFLTY-----T---DFDTVLKEADIV 204 (343)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSSCCGGG--TTTCEE-----C---CHHHHHHHCSEE
T ss_pred ccCCCeEEEEe-cCHHHHHHHHHHh-hCCCEEEEECCChhhhh--hccccc-----c---CHHHHHhcCCEE
Confidence 34578999999 7999999999998 68999999999875421 112222 1 467788888853
No 473
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.11 E-value=0.009 Score=49.71 Aligned_cols=64 Identities=11% Similarity=0.152 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccccc--CCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQ--SSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.+++|+|+| +|.+|+.++..|. ..|++|++.+|++.+.... ..++.+ .+ ++.+.++.+|.|+.+
T Consensus 128 ~~~~v~iiG-aG~~g~aia~~L~-~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~a 193 (275)
T 2hk9_A 128 KEKSILVLG-AGGASRAVIYALV-KEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNT 193 (275)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHH-HHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEEC
T ss_pred CCCEEEEEC-chHHHHHHHHHHH-HcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEe
Confidence 457999999 5999999999998 5678999999987553311 112221 11 233466777755555
No 474
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.11 E-value=0.043 Score=44.84 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~ 63 (303)
..++|+|+| .|.+|+++++.|. ..|. +|++++++.
T Consensus 30 ~~~~VlVvG-~Gg~G~~va~~La-~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVG-LGGLGCAASQYLA-SAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEEC-CSHHHHHHHHHHH-HHTCSEEEEECCCB
T ss_pred hCCeEEEEe-eCHHHHHHHHHHH-HcCCCeEEEEcCCC
Confidence 457999999 5899999999998 5676 799999886
No 475
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.11 E-value=0.013 Score=50.71 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=32.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
+++|.|+| .|.+|..+++.|+ ..|++|++.+|++.+.
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~-~~G~~V~v~dr~~~~~ 58 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLR-KGGHECVVYDLNVNAV 58 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSCHHHH
T ss_pred CCEEEEEC-chHHHHHHHHHHH-hCCCEEEEEeCCHHHH
Confidence 47999999 7999999999999 6899999999987653
No 476
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.10 E-value=0.0098 Score=51.26 Aligned_cols=72 Identities=8% Similarity=0.006 Sum_probs=46.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHH---HHHHHHh--ccCceeEEee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPL---DIKRKLT--LLEDVTHIFW 101 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~---~l~~~~~--~~~~V~~~~~ 101 (303)
.++|+|+||+|.||...++.+. ..|.+|+++++++.+.. ....+... ..|..+.+ .+.+... +.|.|+.+++
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~-~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAK-EEGFRPIVTVRRDEQIALLKDIGAAH-VLNEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHH-HHTCEEEEEESCGGGHHHHHHHTCSE-EEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 3799999999999999998887 57889999998876543 11122322 23444432 3333332 4666666643
No 477
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.10 E-value=0.054 Score=45.76 Aligned_cols=99 Identities=14% Similarity=-0.008 Sum_probs=59.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCccccc-----c------CCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITAI-----Q------SSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~-----~------~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
++|.|+| +|.+|..++..|. ..| ++|++++|++..... . ...+.+.. .|. +.++++|.
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~-~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~----~~~~~aDv 72 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLI-AQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW----AALADADV 72 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-HHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG----GGGTTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCH----HHhCCCCE
Confidence 5899999 7999999999998 467 789999998654320 0 01223222 232 35677775
Q ss_pred eeEEeeccccc--CChHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 042242 96 VTHIFWVTWAS--QFASDMHKCCEQNKAMMCNALNAILPRAKA 136 (303)
Q Consensus 96 V~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~ 136 (303)
|+.++...... .......+....|......+++.+.+.++.
T Consensus 73 Viiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~ 115 (309)
T 1hyh_A 73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFH 115 (309)
T ss_dssp EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 55443322210 011122235778888888888888776543
No 478
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.10 E-value=0.035 Score=51.19 Aligned_cols=61 Identities=15% Similarity=0.092 Sum_probs=49.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHH-HhccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRK-LTLLE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~-~~~~~ 94 (303)
++|+|+|+ |-+|+++++.|. +.|++|+++++++...... ..++.+|.+|.+.++++ ++.+|
T Consensus 349 ~~viIiG~-G~~G~~la~~L~-~~g~~v~vid~d~~~~~~~---~~~i~gD~t~~~~L~~agi~~ad 410 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLD-RKPVPFILIDRQESPVCND---HVVVYGDATVGQTLRQAGIDRAS 410 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHH-HTTCCEEEEESSCCSSCCS---SCEEESCSSSSTHHHHHTTTSCS
T ss_pred CCEEEECC-CHHHHHHHHHHH-HCCCCEEEEECChHHHhhc---CCEEEeCCCCHHHHHhcCccccC
Confidence 78999994 999999999998 6899999999998765422 27899999999988664 23444
No 479
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.09 E-value=0.015 Score=49.14 Aligned_cols=36 Identities=25% Similarity=0.208 Sum_probs=31.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
+++|.|+| .|.+|+.++..|. ..|++|++++|++..
T Consensus 3 ~m~i~iiG-~G~~G~~~a~~l~-~~g~~V~~~~r~~~~ 38 (316)
T 2ew2_A 3 AMKIAIAG-AGAMGSRLGIMLH-QGGNDVTLIDQWPAH 38 (316)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSCHHH
T ss_pred CCeEEEEC-cCHHHHHHHHHHH-hCCCcEEEEECCHHH
Confidence 36899999 5999999999998 689999999998654
No 480
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.09 E-value=0.02 Score=49.11 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|||+||+|.||..+++.+. ..|.+|+++++++.+.
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~ 197 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAK-GMGAKVIAVVNRTAAT 197 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESSGGGH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeCCHHHH
Confidence 46799999999999999999887 6889999999987654
No 481
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=95.09 E-value=0.022 Score=49.27 Aligned_cols=62 Identities=18% Similarity=0.078 Sum_probs=45.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
...+++|.|+| .|.||+.+++.|. .-|++|++.+|..........++.. .++.++++.+|.|
T Consensus 173 ~l~gktvGIIG-lG~IG~~vA~~l~-~fG~~V~~~d~~~~~~~~~~~g~~~--------~~l~ell~~aDvV 234 (365)
T 4hy3_A 173 LIAGSEIGIVG-FGDLGKALRRVLS-GFRARIRVFDPWLPRSMLEENGVEP--------ASLEDVLTKSDFI 234 (365)
T ss_dssp CSSSSEEEEEC-CSHHHHHHHHHHT-TSCCEEEEECSSSCHHHHHHTTCEE--------CCHHHHHHSCSEE
T ss_pred ccCCCEEEEec-CCcccHHHHHhhh-hCCCEEEEECCCCCHHHHhhcCeee--------CCHHHHHhcCCEE
Confidence 34678999999 7999999999997 6899999999875432222233331 2466788888853
No 482
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=95.08 E-value=0.041 Score=46.98 Aligned_cols=63 Identities=14% Similarity=0.130 Sum_probs=44.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++.+.. ....++.. . ++.++++.+|.|+
T Consensus 152 ~l~g~~vgIIG-~G~iG~~iA~~l~-~~G~~V~~~d~~~~~~~~~~~~g~~~-----~---~l~e~l~~aDvVi 215 (330)
T 2gcg_A 152 GLTQSTVGIIG-LGRIGQAIARRLK-PFGVQRFLYTGRQPRPEEAAEFQAEF-----V---STPELAAQSDFIV 215 (330)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHG-GGTCCEEEEESSSCCHHHHHTTTCEE-----C---CHHHHHHHCSEEE
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEECCCCcchhHHHhcCcee-----C---CHHHHHhhCCEEE
Confidence 34578999999 5999999999998 68999999998765322 11223322 1 2556788888533
No 483
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=95.04 E-value=0.072 Score=47.22 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~ 91 (303)
+.++|+|+|+ |.+|+.+++.+. +.|++|++++..+........ -..+.+|..|.+.+.+.++
T Consensus 18 ~~~~ili~g~-g~~g~~~~~a~~-~~G~~v~~v~~~~~~~~~~~a-d~~~~~~~~d~~~l~~~~~ 79 (433)
T 2dwc_A 18 SAQKILLLGS-GELGKEIAIEAQ-RLGVEVVAVDRYANAPAMQVA-HRSYVGNMMDKDFLWSVVE 79 (433)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHH-HTTCEEEEEESSTTCHHHHHS-SEEEESCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-HCCCEEEEEECCCCChhhhhc-ceEEECCCCCHHHHHHHHH
Confidence 4579999995 899999999998 689999999877543211111 1355678889888888876
No 484
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.04 E-value=0.01 Score=49.98 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=31.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.++|.|+| .|.+|+.++..|. ..|++|++.+|++.+.
T Consensus 4 ~~~i~iiG-~G~~G~~~a~~l~-~~g~~V~~~~~~~~~~ 40 (301)
T 3cky_A 4 SIKIGFIG-LGAMGKPMAINLL-KEGVTVYAFDLMEANV 40 (301)
T ss_dssp CCEEEEEC-CCTTHHHHHHHHH-HTTCEEEEECSSHHHH
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-HCCCeEEEEeCCHHHH
Confidence 36899999 7999999999998 5789999999886543
No 485
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.04 E-value=0.013 Score=50.29 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
.+.+|||+||+|.||..+++.+. ..|.+|+++ +++.+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~-~~Ga~Vi~~-~~~~~ 186 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIAL-ARGARVFAT-ARGSD 186 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEE-ECHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-HCCCEEEEE-eCHHH
Confidence 46799999999999999999887 688999998 65544
No 486
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.04 E-value=0.061 Score=44.60 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=43.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+++|+|+|+++.+|+.+++.|+ ..|..|+++.++. ..+.+.++.+|.|+....
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~-~~gAtVtv~hs~t--------------------~~L~~~~~~ADIVI~Avg 211 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELL-LAGCTTTVTHRFT--------------------KNLRHHVENADLLIVAVG 211 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHH-TTTCEEEEECSSC--------------------SCHHHHHHHCSEEEECSC
T ss_pred CCCCEEEEECCChHHHHHHHHHHH-HCCCeEEEEeCCc--------------------hhHHHHhccCCEEEECCC
Confidence 467899999998899999999998 6788899886554 236678888886555543
No 487
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=95.03 E-value=0.021 Score=48.91 Aligned_cols=60 Identities=13% Similarity=0.073 Sum_probs=45.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
...+++|.|.| .|.||+.+++.|. ..|++|++.+|++..... ..++.. .+ +.++++.+|.
T Consensus 138 ~l~g~tvgIiG-~G~IG~~vA~~l~-~~G~~V~~~d~~~~~~~~-~~g~~~-----~~---l~ell~~aDv 197 (334)
T 2pi1_A 138 ELNRLTLGVIG-TGRIGSRVAMYGL-AFGMKVLCYDVVKREDLK-EKGCVY-----TS---LDELLKESDV 197 (334)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSSCCHHHH-HTTCEE-----CC---HHHHHHHCSE
T ss_pred eccCceEEEEC-cCHHHHHHHHHHH-HCcCEEEEECCCcchhhH-hcCcee-----cC---HHHHHhhCCE
Confidence 34578999999 7999999999998 689999999998764321 123332 12 6678888885
No 488
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.01 E-value=0.026 Score=48.31 Aligned_cols=60 Identities=13% Similarity=0.141 Sum_probs=44.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++... .++.. . .++.++++.+|.|+
T Consensus 161 ~l~g~~vgIIG-~G~iG~~vA~~l~-~~G~~V~~~dr~~~~~----~g~~~----~---~~l~ell~~aDvVi 220 (333)
T 3ba1_A 161 KFSGKRVGIIG-LGRIGLAVAERAE-AFDCPISYFSRSKKPN----TNYTY----Y---GSVVELASNSDILV 220 (333)
T ss_dssp CCTTCCEEEEC-CSHHHHHHHHHHH-TTTCCEEEECSSCCTT----CCSEE----E---SCHHHHHHTCSEEE
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEECCCchhc----cCcee----c---CCHHHHHhcCCEEE
Confidence 44578999999 6999999999998 6899999999887542 12221 1 23567888888433
No 489
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.96 E-value=0.019 Score=48.10 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=30.8
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
+|.|+| .|.+|+.++..|. ..|++|++.+|++.+.
T Consensus 2 ~i~iiG-~G~mG~~~a~~l~-~~g~~V~~~~~~~~~~ 36 (296)
T 2gf2_A 2 PVGFIG-LGNMGNPMAKNLM-KHGYPLIIYDVFPDAC 36 (296)
T ss_dssp CEEEEC-CSTTHHHHHHHHH-HTTCCEEEECSSTHHH
T ss_pred eEEEEe-ccHHHHHHHHHHH-HCCCEEEEEeCCHHHH
Confidence 689999 7999999999998 6789999999987653
No 490
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=94.95 E-value=0.062 Score=46.51 Aligned_cols=63 Identities=22% Similarity=0.165 Sum_probs=46.0
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
||+|+| +|.+|+.+++.+. +.|++|++++..+........+. +..|..|.+.+.+.+..+|.|
T Consensus 1 ~iliiG-~g~~g~~~~~a~~-~~G~~v~~~~~~~~~~~~~~a~~--~~~~~~d~~~l~~~~~~~d~v 63 (369)
T 3aw8_A 1 MIGILG-GGQLGRMLALAGY-PLGLSFRFLDPSPEACAGQVGEL--VVGEFLDEGALLRFAEGLALV 63 (369)
T ss_dssp CEEEEC-CSHHHHHHHHHHT-TBTCCEEEEESCTTCGGGGTSEE--EECCTTCHHHHHHHHTTCSEE
T ss_pred CEEEEC-CCHHHHHHHHHHH-HcCCEEEEEeCCCCChHHHhhce--EecCCCCHHHHHHHHhCCCEE
Confidence 589999 6899999999997 78999999987543321111111 467899999888888666643
No 491
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.93 E-value=0.011 Score=47.49 Aligned_cols=37 Identities=27% Similarity=0.361 Sum_probs=31.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEE-EecCCccc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYG-IARKPEIT 66 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~-~~r~~~~~ 66 (303)
+++|.|+| +|.+|..+++.|. ..|++|++ .+|++.+.
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~-~~g~~V~~v~~r~~~~~ 60 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFT-AAQIPAIIANSRGPASL 60 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHH-HTTCCEEEECTTCGGGG
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-hCCCEEEEEECCCHHHH
Confidence 46899999 8999999999998 67999998 77876553
No 492
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.91 E-value=0.025 Score=48.72 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=28.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEe
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIA 60 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~ 60 (303)
+.+|.|.||+|++|+.+++.|.....++|+++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 368999999999999999999855667888885
No 493
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=94.87 E-value=0.017 Score=48.00 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
.+++|+|+|+ |.+|+.++..|+ ..|.+|++..|+.++.
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~-~~G~~v~v~~R~~~~a 155 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLL-QAQQNIVLANRTFSKT 155 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHH-HTTCEEEEEESSHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-HCCCEEEEEECCHHHH
Confidence 5689999996 889999999999 5678999999987553
No 494
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.86 E-value=0.0067 Score=51.66 Aligned_cols=73 Identities=14% Similarity=0.005 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
.+.+|+|+||+|.+|...++.+. ..|.+|+++++..........+... ..|..+.+.+.+.+++.|.|+.+.+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~~~~~~~~~~~lGa~~-~i~~~~~~~~~~~~~g~D~v~d~~g 224 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAK-QKGTTVITTASKRNHAFLKALGAEQ-CINYHEEDFLLAISTPVDAVIDLVG 224 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEECHHHHHHHHHHTCSE-EEETTTSCHHHHCCSCEEEEEESSC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEeccchHHHHHHcCCCE-EEeCCCcchhhhhccCCCEEEECCC
Confidence 46799999999999999999887 6788999888643321112223332 2455554435555566666666543
No 495
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.86 E-value=0.024 Score=48.08 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=31.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
++|.|+| .|.+|+.++..|. ..|++|++.+|++.+.
T Consensus 31 ~~I~iIG-~G~mG~~~a~~l~-~~g~~V~~~~~~~~~~ 66 (316)
T 2uyy_A 31 KKIGFLG-LGLMGSGIVSNLL-KMGHTVTVWNRTAEKC 66 (316)
T ss_dssp SCEEEEC-CSHHHHHHHHHHH-HTTCCEEEECSSGGGG
T ss_pred CeEEEEc-ccHHHHHHHHHHH-hCCCEEEEEeCCHHHH
Confidence 6899999 6999999999998 6789999999987653
No 496
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.85 E-value=0.036 Score=48.72 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCC-------------CH-------HH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLL-------------NP-------LD 85 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~-------------~~-------~~ 85 (303)
.+++|+|+| .|-+|..+++.+. ..|.+|++++|++.... ....+..++..|.. +. +.
T Consensus 171 ~g~~V~ViG-aG~iG~~aa~~a~-~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 171 PPAKVMVIG-AGVAGLAAIGAAN-SLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 468999999 5999999999998 67889999999876532 12224444332221 11 14
Q ss_pred HHHHHhccCceeEEe
Q 042242 86 IKRKLTLLEDVTHIF 100 (303)
Q Consensus 86 l~~~~~~~~~V~~~~ 100 (303)
+.+.++++|.|+.++
T Consensus 249 l~e~~~~aDvVI~~~ 263 (401)
T 1x13_A 249 FAAQAKEVDIIVTTA 263 (401)
T ss_dssp HHHHHHHCSEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 677888888766653
No 497
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.83 E-value=0.011 Score=52.15 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=46.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
..+++|+|+|+ |.+|+.+++.|. ..|. +|++++|++.+.. ...-+..+ .+ .+++.+.+.++|.|+.+
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~-~~G~~~V~v~~r~~~ra~~la~~~g~~~--~~---~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLV-DRGVRAVLVANRTYERAVELARDLGGEA--VR---FDELVDHLARSDVVVSA 234 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHH-HHCCSEEEEECSSHHHHHHHHHHHTCEE--CC---GGGHHHHHHTCSEEEEC
T ss_pred ccCCEEEEECh-HHHHHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHcCCce--ec---HHhHHHHhcCCCEEEEc
Confidence 35789999996 999999999998 5688 7999999876531 11113332 22 23566777888866655
No 498
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=94.80 E-value=0.042 Score=46.33 Aligned_cols=57 Identities=16% Similarity=0.288 Sum_probs=42.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|++. .. +. ....++.++++.+|.
T Consensus 121 ~l~g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~~~dr~~~-~~----~~-------~~~~~l~ell~~aDv 177 (303)
T 1qp8_A 121 LIQGEKVAVLG-LGEIGTRVGKILA-ALGAQVRGFSRTPK-EG----PW-------RFTNSLEEALREARA 177 (303)
T ss_dssp CCTTCEEEEES-CSTHHHHHHHHHH-HTTCEEEEECSSCC-CS----SS-------CCBSCSHHHHTTCSE
T ss_pred CCCCCEEEEEc-cCHHHHHHHHHHH-HCCCEEEEECCCcc-cc----Cc-------ccCCCHHHHHhhCCE
Confidence 45678999999 7999999999998 68999999998765 11 11 112245678888884
No 499
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=94.78 E-value=0.029 Score=48.30 Aligned_cols=63 Identities=17% Similarity=0.149 Sum_probs=45.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
...+++|.|+| .|.||+.+++.|. .-|++|++.+|++.... ....+++.. +++.++++.+|.|
T Consensus 161 ~l~gktvGIIG-~G~IG~~vA~~l~-~~G~~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~~aDvV 224 (351)
T 3jtm_A 161 DLEGKTIGTVG-AGRIGKLLLQRLK-PFGCNLLYHDRLQMAPELEKETGAKFV-------EDLNEMLPKCDVI 224 (351)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHG-GGCCEEEEECSSCCCHHHHHHHCCEEC-------SCHHHHGGGCSEE
T ss_pred cccCCEEeEEE-eCHHHHHHHHHHH-HCCCEEEEeCCCccCHHHHHhCCCeEc-------CCHHHHHhcCCEE
Confidence 45678999999 7999999999998 68999999998764321 111122221 3467888888853
No 500
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.75 E-value=0.02 Score=47.91 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=29.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
++|.|+| .|.+|+.++..|. ..|++|++.+ ++.+
T Consensus 4 m~i~iiG-~G~~G~~~a~~l~-~~g~~V~~~~-~~~~ 37 (295)
T 1yb4_A 4 MKLGFIG-LGIMGSPMAINLA-RAGHQLHVTT-IGPV 37 (295)
T ss_dssp CEEEECC-CSTTHHHHHHHHH-HTTCEEEECC-SSCC
T ss_pred CEEEEEc-cCHHHHHHHHHHH-hCCCEEEEEc-CHHH
Confidence 5899999 7999999999998 5789999888 6544
Done!