Query 042244
Match_columns 368
No_of_seqs 303 out of 3778
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 07:01:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042244.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042244hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 7.6E-32 2.6E-36 242.2 19.9 182 12-207 53-234 (253)
2 2f8y_A Notch homolog 1, transl 100.0 1.9E-31 6.6E-36 234.3 21.9 182 12-207 21-202 (223)
3 2dzn_A Probable 26S proteasome 100.0 1.6E-31 5.5E-36 235.4 21.3 180 16-206 2-184 (228)
4 1oy3_D Transcription factor in 100.0 1.5E-31 5E-36 243.0 19.9 183 12-207 5-236 (282)
5 2rfa_A Transient receptor pote 100.0 2.8E-31 9.5E-36 234.8 21.2 181 15-207 2-208 (232)
6 2dzn_A Probable 26S proteasome 100.0 1.4E-31 4.7E-36 235.9 18.8 184 12-206 32-218 (228)
7 1yyh_A HN1;, notch 1, ankyrin 100.0 4.7E-32 1.6E-36 243.6 16.0 185 10-207 4-201 (253)
8 3hra_A Ankyrin repeat family p 100.0 3.1E-31 1.1E-35 229.2 20.5 181 14-207 3-189 (201)
9 3aji_A 26S proteasome non-ATPa 100.0 3.9E-31 1.3E-35 233.6 20.6 178 13-205 37-214 (231)
10 3b7b_A Euchromatic histone-lys 100.0 2.9E-31 9.8E-36 235.4 19.4 181 12-206 7-187 (237)
11 3aji_A 26S proteasome non-ATPa 100.0 7.1E-31 2.4E-35 231.9 21.0 181 13-207 3-183 (231)
12 4gpm_A Engineered protein OR26 100.0 5.2E-31 1.8E-35 222.5 18.7 154 18-185 6-159 (169)
13 4b93_B Ankyrin repeat domain-c 100.0 1.1E-31 3.8E-36 243.7 15.5 183 11-207 6-229 (269)
14 3b7b_A Euchromatic histone-lys 100.0 9.4E-31 3.2E-35 232.1 21.0 184 10-207 38-221 (237)
15 1oy3_D Transcription factor in 100.0 6.5E-31 2.2E-35 238.7 18.4 185 10-207 39-269 (282)
16 1k1a_A B-cell lymphoma 3-encod 100.0 2.2E-30 7.4E-35 230.0 20.9 184 11-207 4-194 (241)
17 2xai_A ASB-9, ankyrin repeat a 100.0 6.7E-31 2.3E-35 237.2 17.7 178 12-206 32-209 (261)
18 2xai_A ASB-9, ankyrin repeat a 100.0 1.9E-30 6.6E-35 234.2 20.0 176 15-207 2-177 (261)
19 1k1a_A B-cell lymphoma 3-encod 100.0 1.4E-30 4.9E-35 231.1 18.7 184 10-206 40-226 (241)
20 1ikn_D Protein (I-kappa-B-alph 100.0 9.9E-32 3.4E-36 238.6 9.9 184 11-207 3-195 (236)
21 3v30_A DNA-binding protein rfx 100.0 1.9E-30 6.6E-35 218.9 17.1 170 16-199 2-171 (172)
22 3d9h_A CDNA FLJ77766, highly s 100.0 8.7E-30 3E-34 233.0 20.8 181 10-207 53-233 (285)
23 1s70_B 130 kDa myosin-binding 100.0 2.7E-30 9.4E-35 237.1 16.8 179 12-205 36-274 (299)
24 3d9h_A CDNA FLJ77766, highly s 100.0 3.9E-30 1.3E-34 235.3 17.3 179 11-206 87-265 (285)
25 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-29 4.5E-34 237.0 21.2 183 10-206 52-290 (351)
26 3ljn_A Hypothetical protein; a 100.0 6.7E-30 2.3E-34 241.4 18.5 190 11-207 15-255 (364)
27 2etb_A Transient receptor pote 100.0 4.9E-30 1.7E-34 230.5 16.4 179 15-207 1-232 (256)
28 3kea_A K1L; tropism, ANK repea 100.0 3.1E-30 1.1E-34 236.1 15.0 180 10-207 25-206 (285)
29 1wdy_A 2-5A-dependent ribonucl 100.0 4.8E-29 1.6E-33 226.2 20.8 181 14-207 70-264 (285)
30 1wdy_A 2-5A-dependent ribonucl 100.0 6.2E-29 2.1E-33 225.4 20.7 182 14-208 3-194 (285)
31 3eu9_A Huntingtin-interacting 100.0 4.9E-29 1.7E-33 220.6 19.1 183 11-207 37-221 (240)
32 2pnn_A Transient receptor pote 100.0 6.2E-30 2.1E-34 232.1 13.3 186 9-207 6-244 (273)
33 1n11_A Ankyrin; clathrin, BAND 100.0 5.6E-29 1.9E-33 240.7 20.5 179 14-207 210-388 (437)
34 2fo1_E LIN-12 protein; beta-ba 100.0 3.7E-29 1.3E-33 237.6 18.9 185 10-207 160-357 (373)
35 3v31_A Ankyrin repeat family A 100.0 4.4E-29 1.5E-33 209.6 17.2 157 15-185 2-158 (167)
36 2rfm_A Putative ankyrin repeat 100.0 3.5E-29 1.2E-33 215.2 15.5 160 12-185 31-190 (192)
37 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-28 4.9E-33 237.9 21.1 183 10-207 8-190 (437)
38 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-28 6.4E-33 206.4 18.0 160 12-185 10-169 (169)
39 3hra_A Ankyrin repeat family p 100.0 2E-28 6.8E-33 211.5 18.3 165 9-185 32-201 (201)
40 3utm_A Tankyrase-1; tankyrase, 100.0 1.5E-28 5.1E-33 229.8 18.9 183 12-207 20-258 (351)
41 3jxi_A Vanilloid receptor-rela 100.0 3.1E-29 1.1E-33 225.6 13.7 182 13-207 2-236 (260)
42 3ljn_A Hypothetical protein; a 100.0 8.6E-29 2.9E-33 233.8 17.2 151 45-206 14-221 (364)
43 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.3E-28 4.5E-33 205.4 15.9 157 15-185 4-160 (162)
44 3f6q_A Integrin-linked protein 100.0 1.3E-28 4.6E-33 209.2 16.0 168 14-195 3-170 (179)
45 3twr_A Tankyrase-2; ankyrin re 100.0 7.3E-29 2.5E-33 207.8 13.2 159 13-185 5-163 (165)
46 1ikn_D Protein (I-kappa-B-alph 100.0 4.5E-29 1.5E-33 221.4 12.1 184 10-205 39-228 (236)
47 1awc_B Protein (GA binding pro 100.0 4.3E-28 1.5E-32 200.7 17.3 151 16-181 2-152 (153)
48 2rfa_A Transient receptor pote 100.0 3E-28 1E-32 215.3 17.4 166 9-185 30-220 (232)
49 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.5E-28 1.2E-32 201.6 16.4 154 16-184 2-155 (156)
50 2f8y_A Notch homolog 1, transl 100.0 8.7E-28 3E-32 210.9 18.6 162 11-185 53-214 (223)
51 4b93_B Ankyrin repeat domain-c 100.0 6.9E-29 2.4E-33 225.3 10.9 151 10-174 80-230 (269)
52 1sw6_A Regulatory protein SWI6 100.0 2.4E-28 8.2E-33 227.9 14.6 177 12-206 127-326 (327)
53 2fo1_E LIN-12 protein; beta-ba 100.0 1.5E-28 5.2E-33 233.3 13.4 182 14-207 123-324 (373)
54 4hbd_A KN motif and ankyrin re 100.0 1.1E-28 3.8E-33 224.7 11.7 183 14-207 74-261 (276)
55 4gpm_A Engineered protein OR26 100.0 1.3E-27 4.3E-32 201.7 17.2 142 53-207 6-147 (169)
56 4hbd_A KN motif and ankyrin re 100.0 1E-27 3.4E-32 218.4 16.2 162 11-185 106-273 (276)
57 3eu9_A Huntingtin-interacting 100.0 3E-27 1E-31 209.0 18.7 181 13-207 6-188 (240)
58 4g8k_A 2-5A-dependent ribonucl 100.0 6.4E-27 2.2E-31 218.7 20.7 151 48-207 122-284 (337)
59 2pnn_A Transient receptor pote 99.9 8.8E-28 3E-32 217.9 14.3 179 12-201 50-272 (273)
60 2rfm_A Putative ankyrin repeat 99.9 3.5E-27 1.2E-31 202.6 16.2 150 45-207 29-178 (192)
61 2etb_A Transient receptor pote 99.9 4.6E-28 1.6E-32 217.5 11.0 162 12-185 39-244 (256)
62 3jxi_A Vanilloid receptor-rela 99.9 2E-27 6.9E-32 213.7 12.3 161 14-186 44-249 (260)
63 4g8k_A 2-5A-dependent ribonucl 99.9 2.4E-26 8.2E-31 214.8 20.0 179 12-202 21-208 (337)
64 3v31_A Ankyrin repeat family A 99.9 2.1E-26 7.2E-31 193.1 16.2 145 50-207 2-146 (167)
65 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-27 3.6E-32 213.4 8.5 180 13-208 2-193 (239)
66 2vge_A RELA-associated inhibit 99.9 8.7E-29 3E-33 219.3 1.1 181 9-207 14-199 (229)
67 3v30_A DNA-binding protein rfx 99.9 4.9E-26 1.7E-30 191.9 16.3 145 51-207 2-146 (172)
68 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-26 5.2E-31 193.6 13.0 148 47-206 4-151 (165)
69 3kea_A K1L; tropism, ANK repea 99.9 1.3E-26 4.3E-31 212.1 13.3 163 15-194 61-226 (285)
70 3t8k_A Uncharacterized protein 99.9 4.3E-27 1.5E-31 201.6 8.3 162 13-185 3-177 (186)
71 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.9E-26 1.7E-30 189.7 14.5 146 49-207 3-148 (162)
72 2y1l_E Darpin-8.4; hydrolase-i 99.9 9.3E-26 3.2E-30 189.8 16.3 148 47-207 10-157 (169)
73 1awc_B Protein (GA binding pro 99.9 1.1E-25 3.7E-30 186.2 15.4 143 51-207 2-144 (153)
74 3f6q_A Integrin-linked protein 99.9 9.1E-26 3.1E-30 191.6 14.0 147 48-206 2-148 (179)
75 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.5E-25 5.1E-30 185.7 14.6 143 51-207 2-144 (156)
76 1s70_B 130 kDa myosin-binding 99.9 8.4E-25 2.9E-29 200.4 16.9 174 22-207 4-243 (299)
77 1bi7_B P16INK4A, MTS1, multipl 99.9 1.5E-25 5.1E-30 186.1 10.2 143 47-203 8-151 (156)
78 1bi7_B P16INK4A, MTS1, multipl 99.9 2.6E-25 8.9E-30 184.7 10.0 143 11-168 7-150 (156)
79 1d9s_A Cyclin-dependent kinase 99.9 8.1E-25 2.8E-29 177.4 10.6 125 48-185 9-134 (136)
80 1d9s_A Cyclin-dependent kinase 99.9 1.4E-24 4.9E-29 175.9 11.9 119 85-207 3-122 (136)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 4.4E-24 1.5E-28 173.0 13.5 125 13-150 11-135 (136)
82 2vge_A RELA-associated inhibit 99.9 4.4E-25 1.5E-29 195.4 7.7 161 33-206 2-166 (229)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.4E-23 4.7E-28 166.8 15.2 125 15-152 1-125 (126)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 5E-24 1.7E-28 172.7 12.9 127 47-185 10-136 (136)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3E-23 1E-27 164.8 14.9 124 50-185 1-124 (126)
86 1sw6_A Regulatory protein SWI6 99.9 2.4E-24 8.1E-29 200.8 9.7 169 18-207 99-294 (327)
87 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.5E-23 5.2E-28 186.5 11.6 142 48-203 2-144 (239)
88 3deo_A Signal recognition part 99.9 2.8E-23 9.6E-28 177.0 12.0 142 11-184 39-181 (183)
89 3ui2_A Signal recognition part 99.9 5.8E-23 2E-27 183.4 12.6 143 10-184 39-182 (244)
90 3c5r_A BARD-1, BRCA1-associate 99.9 1.7E-23 5.7E-28 169.7 7.6 125 47-183 6-130 (137)
91 3t8k_A Uncharacterized protein 99.9 4.7E-23 1.6E-27 176.4 9.7 143 51-207 6-165 (186)
92 3c5r_A BARD-1, BRCA1-associate 99.9 3.4E-23 1.2E-27 167.8 8.0 128 11-151 5-132 (137)
93 3aaa_C Myotrophin, protein V-1 99.9 9.8E-23 3.3E-27 162.0 9.8 115 48-174 4-118 (123)
94 3ehr_A Osteoclast-stimulating 99.9 6.2E-23 2.1E-27 180.2 8.8 137 48-196 70-206 (222)
95 2b0o_E UPLC1; arfgap, structur 99.9 1.5E-22 5.3E-27 186.3 11.6 141 16-175 151-299 (301)
96 2aja_A Ankyrin repeat family p 99.9 4.1E-24 1.4E-28 202.4 0.7 161 12-192 88-254 (376)
97 3ehr_A Osteoclast-stimulating 99.9 1.1E-22 3.8E-27 178.6 9.5 139 11-162 68-206 (222)
98 3aaa_C Myotrophin, protein V-1 99.9 2.1E-22 7.2E-27 160.1 9.9 117 14-143 5-121 (123)
99 3deo_A Signal recognition part 99.9 5.6E-22 1.9E-26 168.9 11.0 128 48-206 41-169 (183)
100 2b0o_E UPLC1; arfgap, structur 99.9 1.8E-21 6.1E-26 179.2 12.3 137 51-206 151-296 (301)
101 3ui2_A Signal recognition part 99.9 1.1E-21 3.6E-26 175.2 10.4 155 16-206 15-170 (244)
102 2aja_A Ankyrin repeat family p 99.8 1.3E-22 4.5E-27 192.1 0.5 124 12-153 124-250 (376)
103 1dcq_A PYK2-associated protein 99.8 2.2E-20 7.5E-25 170.0 14.9 128 16-154 130-264 (278)
104 3jue_A Arfgap with coiled-coil 99.8 1.4E-20 4.9E-25 177.5 12.5 144 50-205 198-346 (368)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.3E-20 7.9E-25 140.7 11.1 92 50-152 1-92 (93)
106 3jue_A Arfgap with coiled-coil 99.8 2.2E-20 7.5E-25 176.3 12.5 117 88-207 193-312 (368)
107 3lvq_E ARF-GAP with SH3 domain 99.8 3.8E-20 1.3E-24 182.0 14.3 135 18-170 134-275 (497)
108 1dcq_A PYK2-associated protein 99.8 3.4E-19 1.2E-23 162.1 17.5 123 52-185 131-261 (278)
109 3lvq_E ARF-GAP with SH3 domain 99.8 1.8E-19 6.3E-24 177.1 14.9 129 51-192 132-269 (497)
110 2l6b_A NR1C; ankyrin, consensu 99.8 7.9E-20 2.7E-24 143.2 8.5 107 47-165 5-111 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.7E-19 1.3E-23 134.0 11.4 91 93-185 1-91 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.8 1.8E-19 6.2E-24 141.1 8.6 109 89-200 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 1.1E-17 3.9E-22 130.0 9.5 92 45-147 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 3.4E-17 1.2E-21 127.3 9.7 96 84-181 14-109 (110)
115 3gvo_A Pumilio 2, pumilio homo 47.3 43 0.0015 30.2 7.0 51 13-63 34-85 (351)
116 3gvo_A Pumilio 2, pumilio homo 43.2 74 0.0025 28.6 8.0 51 13-63 70-121 (351)
117 3k49_A MRNA-binding protein PU 31.3 75 0.0026 28.8 6.0 163 13-183 39-207 (369)
118 1gp8_A Protein (scaffolding pr 29.5 38 0.0013 19.8 2.2 20 54-81 16-35 (40)
119 3zrh_A Ubiquitin thioesterase 23.0 1.9E+02 0.0064 26.8 6.7 54 21-82 27-92 (454)
120 3bwt_A Protein PUF4; pumilio, 21.1 1E+02 0.0035 27.3 4.7 160 13-182 21-189 (333)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.6e-32 Score=242.19 Aligned_cols=182 Identities=17% Similarity=0.071 Sum_probs=168.9
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
.+..|.||||.|++.|+.++++.|++.+.+. ...|..|+||||+|+..|+ .++++.|++.+ +..++.+|
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~~-~~~~~~~~ 121 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASADA--NIQDNMGRTPLHAAVSADA--------QGVFQILIRNR-ATDLDARM 121 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTC--------HHHHHHHHHST-TSCTTCCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCC--------HHHHHHHHHcC-CCCccccC
Confidence 3678999999999999999999999986554 3448899999999999999 99999999998 55788999
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHH
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLID 171 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~ 171 (368)
..|.||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||.|+.
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM-QNNREETPLFLAAR 199 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHH
Confidence 99999999999999999999999998765 88999999999999999999999999999999886 99999999999999
Q ss_pred hCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 172 ATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 172 ~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
.|+.++++.|++.+ .+.+.+|..|+||+|+|+++.
T Consensus 200 ~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 200 EGSYETAKVLLDHF-ANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp HTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCHHHHHHHHHcC-CCccccccCCCCHHHHHHHcC
Confidence 99999999999987 888999999999999998874
No 2
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.9e-31 Score=234.27 Aligned_cols=182 Identities=17% Similarity=0.071 Sum_probs=168.3
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
.+..|.||||.|++.|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ +..++.+|
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~~-~~~~~~~~ 89 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADA--NIQDNMGRTPLHAAVSADA--------QGVFQILIRNR-ATDLDARM 89 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHBT-TSCTTCCC
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCC--------HHHHHHHHHcC-CCCcccCC
Confidence 3678999999999999999999999986554 3458899999999999999 99999999998 55788999
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHH
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLID 171 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~ 171 (368)
..|.||||+|+..|+.+++++|++.+.+. +.+|..|+||||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|+.
T Consensus 90 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~ 167 (223)
T 2f8y_A 90 HDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM-QNNREETPLFLAAR 167 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHH
T ss_pred CCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCcCHHHHHHH
Confidence 99999999999999999999999998765 88999999999999999999999999999988886 99999999999999
Q ss_pred hCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 172 ATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 172 ~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
.++.++++.|++.+ ...+.+|.+|.||+|+|+++.
T Consensus 168 ~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 168 EGSYETAKVLLDHF-ANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp HTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred cCCHHHHHHHHHcC-CCCccccccCCCHHHHHHHhc
Confidence 99999999999987 788899999999999998864
No 3
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.6e-31 Score=235.45 Aligned_cols=180 Identities=19% Similarity=0.155 Sum_probs=98.5
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc-hhcCC
Q 042244 16 RYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ-RDDIG 94 (368)
Q Consensus 16 g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~-~d~~G 94 (368)
|+||||.|++.|+.+.++.|++..++.. ...|..|+||||+|+..|+ .++++.|++.+....+.. +|..|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~~~~~~~~~~~~~~g 72 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLL-LQKDQDGRIPLHWSVSFQA--------HEITSFLLSKMENVNLDDYPDDSG 72 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGT-TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTCTTCCGGGCCCTTS
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcccc-ccCCCCCCCHHHHHHHcCC--------HHHHHHHHhccccccccccCCCCC
Confidence 4555555555555555555555555443 3335555555555555555 555555555542222233 45555
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhC--CCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHh
Q 042244 95 YTALYQCAVKGNLRALKVLVKYN--PDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDA 172 (368)
Q Consensus 95 ~tpLh~A~~~g~~~~v~~Ll~~~--~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~ 172 (368)
+||||+|+..|+.+++++|++++ ++ .+.+|.+|+||||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|+..
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 150 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI-KDKFNQIPLHRAASV 150 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccc-cCCCCCCHHHHHHHc
Confidence 55555555555555555555554 22 244555555555555555555555555555555444 555555555555555
Q ss_pred CchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 173 TLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 173 ~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
|+.++++.|++.++...+.+|.+|+||+|+|++.
T Consensus 151 ~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 151 GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp TCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHc
Confidence 5555555555555455555555555555555544
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.98 E-value=1.5e-31 Score=243.03 Aligned_cols=183 Identities=15% Similarity=0.045 Sum_probs=153.9
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCc--ccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPD--ALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~--~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
.+..|.||||.|++.|+.++++.|++..++ .. ...|..|+||||+||..|+ .++++.|++++ ..++.
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--a~~~~ 73 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYL-DLQNDLGQTALHLAAILGE--------ASTVEKLYAAG--AGVLV 73 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGG-GCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--CCSSC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccc-cccCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCC
Confidence 456789999999999999999999986443 34 4558889999999999999 99999999988 77888
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhhCCC----------------------------------------------Cccc
Q 042244 90 RDDIGYTALYQCAVKGNLRALKVLVKYNPD----------------------------------------------LTNK 123 (368)
Q Consensus 90 ~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~----------------------------------------------~~~~ 123 (368)
+|..|+||||+|+..|+.+++++|++.++. .++.
T Consensus 74 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T 1oy3_D 74 AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA 153 (282)
T ss_dssp CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC
T ss_pred CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC
Confidence 888999999999999999999999887543 1356
Q ss_pred cCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccC-CCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHH
Q 042244 124 RDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSG-NDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNA 202 (368)
Q Consensus 124 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l 202 (368)
+|..|+||||+|+.+|+.+++++|++.+.+... ++ ..|+||||+|+..|+.++++.|++.+ .+.+.+|.+|+||||+
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK-PEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGS 231 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHH
Confidence 788899999999999999999999998888776 55 45999999999999999999999886 7888889999999999
Q ss_pred HhcCC
Q 042244 203 LAEKP 207 (368)
Q Consensus 203 ~~~~~ 207 (368)
|+++.
T Consensus 232 A~~~~ 236 (282)
T 1oy3_D 232 ALLRP 236 (282)
T ss_dssp HHTSS
T ss_pred HHHcC
Confidence 88764
No 5
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=2.8e-31 Score=234.84 Aligned_cols=181 Identities=17% Similarity=0.083 Sum_probs=158.1
Q ss_pred cCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhh----hch
Q 042244 15 ARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTL----EQR 90 (368)
Q Consensus 15 ~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~----~~~ 90 (368)
.|.||||.|++.|+.+.++.|++..+... ...|..|+||||+|+..|+ .++++.|++.+ +... +.+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~~-~~~~~~~~~~~ 71 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDN--------LEAAMVLMEAA-PELVFEPMTSE 71 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHHC-GGGGGCCCCST
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCC--------HHHHHHHHHcC-chhcccccccc
Confidence 48899999999999999999999844334 4558999999999999999 99999999998 3321 567
Q ss_pred hcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC-------------CCCcHHHHHHhhCCHHHHHHHHhhCCCCccc
Q 042244 91 DDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT-------------LDSLPVIQAAYHGHKDTFQYLREVTHGVDIY 157 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~-------------~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~ 157 (368)
|..|+||||+|+..|+.+++++|++++.+. +.++. +|+||||+|+.+|+.+++++|++.+.+.+.
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~- 149 (232)
T 2rfa_A 72 LYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA- 149 (232)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC-
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-
Confidence 789999999999999999999999998765 44443 799999999999999999999999998886
Q ss_pred cCCCCchHHHHHHHhCchHHH----HHHHHhCCccc-----ccCCCCCCcHHHHHhcCC
Q 042244 158 SGNDGANMLSRLIDATLYDVA----LDLLKLYPTIG-----RDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 158 ~~~~g~t~Lh~a~~~~~~~~~----~~Ll~~~~~~~-----~~~~~~g~Tpl~l~~~~~ 207 (368)
+|.+|+||||+|+..++.+++ +.|++.+.... +.+|.+|+||+|+|+++.
T Consensus 150 ~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 150 QDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp CCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 999999999999999999988 88888874322 688999999999998864
No 6
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.98 E-value=1.4e-31 Score=235.87 Aligned_cols=184 Identities=13% Similarity=0.044 Sum_probs=166.2
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcC--CcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTND--PDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~--p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
.+..|.||||.|+..|+.++++.|++.. ++.. ...+..|.||||+|+..|+ .++++.|++.+.+..++.
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~~~~Ll~~g~~~~~~~ 102 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD-DYPDDSGWTPFHIACSVGN--------LEVVKSLYDRPLKPDLNK 102 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGG-GCCCTTSCCHHHHHHHHCC--------HHHHHHHHSSSSCCCTTC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc-ccCCCCCCCHHHHHHHcCC--------HHHHHHHHhCCCCccccc
Confidence 5678999999999999999999999987 5443 3268899999999999999 999999999874466888
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhC-CCCccccCCCCchHHHH
Q 042244 90 RDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVT-HGVDIYSGNDGANMLSR 168 (368)
Q Consensus 90 ~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~Lh~ 168 (368)
+|..|.||||+|+..|+.+++++|++++.+. +.+|..|+||||+|+.+|+.+++++|++.+ .+.+. +|.+|+||||.
T Consensus 103 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~d~~g~t~L~~ 180 (228)
T 2dzn_A 103 ITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW-QDKQGWTPLFH 180 (228)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC-CCTTSCCHHHH
T ss_pred CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC-cCCCCCCHHHH
Confidence 9999999999999999999999999998765 889999999999999999999999999999 66665 89999999999
Q ss_pred HHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 169 LIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 169 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
|+..|+.++++.|++..+.+.+.+|.+|+||+|+|.++
T Consensus 181 A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 181 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred HHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 99999999999999444489999999999999998654
No 7
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=4.7e-32 Score=243.57 Aligned_cols=185 Identities=16% Similarity=0.088 Sum_probs=141.2
Q ss_pred hhhhccCChHHHHHHHhC-------------CHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHH
Q 042244 10 EDEYCARYWPLYRMIEKN-------------DWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLD 76 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G-------------~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~ 76 (368)
+..+..|+||||.|+..| +.++++.|++.+++.. ...|..|+||||+|+..|+ .++++
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~g~--------~~~v~ 74 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSR--------SDAAK 74 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTC--------HHHHH
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcc-cccCCCCCcHHHHHHHcCC--------HHHHH
Confidence 345678999999999988 8999999999988765 5558899999999999999 99999
Q ss_pred HHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCcc
Q 042244 77 KLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDI 156 (368)
Q Consensus 77 ~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~ 156 (368)
.|++.+ ..++.+|..|+||||+|+..|+.+++++|++.++...+.+|.+|+||||+|+..|+.+++++|++.+.+.+.
T Consensus 75 ~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 152 (253)
T 1yyh_A 75 RLLEAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 152 (253)
T ss_dssp HHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTC
T ss_pred HHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCC
Confidence 999998 778999999999999999999999999999998766689999999999999999999999999999998886
Q ss_pred ccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 157 YSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 157 ~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
+|.+|+||||.|+..|+.++++.|++.+ ...+.+|.+|+||+|+|+++.
T Consensus 153 -~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 153 -VDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREG 201 (253)
T ss_dssp -BCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCC
Confidence 9999999999999999999999999986 888999999999999998754
No 8
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=3.1e-31 Score=229.21 Aligned_cols=181 Identities=15% Similarity=0.145 Sum_probs=165.7
Q ss_pred ccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcC
Q 042244 14 CARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDI 93 (368)
Q Consensus 14 ~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~ 93 (368)
..+.||||.|+..|+.+.++.+++..+... ...|.+|.||||+|+..|+ .++++.|++.+ .+++.+|..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~~~ 71 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQV-DEVDTEGNTPLNIAVHNND--------IEIAKALIDRG--ADINLQNSI 71 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCT-TCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCC-CCCCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCCCCCC
Confidence 468899999999999999999999877444 5558899999999999999 99999999998 778999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhC-CCCccccCCCCchHHHHHHHh
Q 042244 94 GYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVT-HGVDIYSGNDGANMLSRLIDA 172 (368)
Q Consensus 94 G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~Lh~a~~~ 172 (368)
|+||||+|+..|+.+++++|++.+....+..|..|+||||+|+.+|+.+++++|++.+ .+.+. +|.+|+||||.|+..
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF-QNDFGYTALIEAVGL 150 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC-CCTTSCCHHHHHHHS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC-CCCCCCCHHHHHHHh
Confidence 9999999999999999999997776666899999999999999999999999999998 66665 999999999999999
Q ss_pred Cc-----hHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 173 TL-----YDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 173 ~~-----~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
++ .++++.|++.+ .+.+.+|.+|+||+|+|+++.
T Consensus 151 ~~~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~ 189 (201)
T 3hra_A 151 REGNQLYQDIVKLLMENG-ADQSIKDNSGRTAMDYANQKG 189 (201)
T ss_dssp SCCSHHHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred ccchhhHHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHcC
Confidence 88 89999999987 888999999999999998753
No 9
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.98 E-value=3.9e-31 Score=233.63 Aligned_cols=178 Identities=15% Similarity=0.032 Sum_probs=119.3
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhc
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDD 92 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~ 92 (368)
+..|.||||.|+..|+.++++.|++.+.+. ...|..|+||||+|+..|+ .++++.|++.+ ..++.+|.
T Consensus 37 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~~ 104 (231)
T 3aji_A 37 DQDSRTALHWACSAGHTEIVEFLLQLGVPV--NDKDDAGWSPLHIAASAGX--------DEIVKALLVKG--AHVNAVNQ 104 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHhCCCC--CCcCCCCCCHHHHHHHcCH--------HHHHHHHHHcC--CCCCCCCC
Confidence 455667777777777777777776664433 2335666777777777777 77777777766 55666666
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHh
Q 042244 93 IGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDA 172 (368)
Q Consensus 93 ~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~ 172 (368)
.|.||||+|+..|+.+++++|++++.+. +.+|..|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||.|+..
T Consensus 105 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 105 NGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI-QDTEGNTPLHLACDE 182 (231)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc-cCCCCCCHHHHHHHC
Confidence 6777777777777777777777666543 56666677777777777777777777776666654 666777777777777
Q ss_pred CchHHHHHHHHhCCcccccCCCCCCcHHHHHhc
Q 042244 173 TLYDVALDLLKLYPTIGRDNIDSRRIVLNALAE 205 (368)
Q Consensus 173 ~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~ 205 (368)
++.+++++|++.+ .+.+.+|.+|+||+|+|.+
T Consensus 183 ~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 183 ERVEEAKFLVTQG-ASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp TCHHHHHHHHHTT-CCSCCCCTTSCCHHHHSCH
T ss_pred CCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHh
Confidence 7777777777664 5666667777777776644
No 10
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=2.9e-31 Score=235.40 Aligned_cols=181 Identities=18% Similarity=0.065 Sum_probs=110.7
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
++..|.||||.|+..|+.++++.|++.+.+. ...+.+|.||||+|+..|+ .++++.|++.+ ..++.+|
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~ 74 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANI--DTCSEDQRTPLMEAAENNH--------LEAVKYLIKAG--ALVDPKD 74 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTC--------HHHHHHHHTTT--CCCCCCC
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc--CccCCCCCCHHHHHHHhCC--------HHHHHHHHhCC--CCCCCCC
Confidence 3456777777777777777777777765443 3336667777777777777 66666666655 4455555
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHH
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLID 171 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~ 171 (368)
..|.||||+|+..|+.+++++|++.++...+..|..|.||||+|+..|+.+++++|++.+.+... +|.+|+||||.|+.
T Consensus 75 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 75 AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI-RDNEENICLHWAAF 153 (237)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc-cCCCCCCHHHHHHH
Confidence 56666666666666666666666655444455555666666666666666666666665555544 55556666666666
Q ss_pred hCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 172 ATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 172 ~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
.|+.++++.|++.+ ...+.+|.+|.||+|+|++.
T Consensus 154 ~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 154 SGCVDIAEILLAAK-CDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp HCCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHT
T ss_pred CCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHh
Confidence 66666666555554 45555555566666655554
No 11
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=7.1e-31 Score=231.92 Aligned_cols=181 Identities=14% Similarity=0.102 Sum_probs=168.5
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhc
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDD 92 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~ 92 (368)
...+.+|||.|++.|+.+.++++++.++... ...|..|.||||+|+..|+ .++++.|++.+ ..++.+|.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~~ 71 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLA-TRTDQDSRTALHWACSAGH--------TEIVEFLLQLG--VPVNDKDD 71 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGG-GCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--CCSCCCCT
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhh-hcCCCCCCCHHHHHHHcCc--------HHHHHHHHHhC--CCCCCcCC
Confidence 3468899999999999999999999988776 6668999999999999999 99999999998 67889999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHh
Q 042244 93 IGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDA 172 (368)
Q Consensus 93 ~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~ 172 (368)
.|+||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+..|+.+++++|++.+.+... .|..|.||||.|+..
T Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 72 AGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA-KDHYDATAMHRAAAK 149 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHc
Confidence 9999999999999999999999998765 88899999999999999999999999999988876 899999999999999
Q ss_pred CchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 173 TLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 173 ~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|+.++++.|++.+ ...+.+|.+|+||+|+|++..
T Consensus 150 ~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 183 (231)
T 3aji_A 150 GNLKMVHILLFYK-ASTNIQDTEGNTPLHLACDEE 183 (231)
T ss_dssp TCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHHhcC-CCccccCCCCCCHHHHHHHCC
Confidence 9999999999976 888899999999999998864
No 12
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=5.2e-31 Score=222.49 Aligned_cols=154 Identities=25% Similarity=0.274 Sum_probs=144.4
Q ss_pred hHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcH
Q 042244 18 WPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTA 97 (368)
Q Consensus 18 t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tp 97 (368)
++|+.|++.|+.++|+.|++.+.+. ...|.+|+||||+|+..++ .++++.|++.+ .+++.+|.+|+||
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv--n~~d~~g~t~l~~a~~~~~--------~~~~~~ll~~g--ad~~~~d~~g~Tp 73 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV--NASDSDGRTPLHHAAENGH--------KEVVKLLISKG--ADVNAKDSDGRTP 73 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCCTTSCCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCC--------HHHHHHHHhcc--cchhhhccCCCCH
Confidence 5799999999999999999986654 3458999999999999999 99999999998 7899999999999
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHH
Q 042244 98 LYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDV 177 (368)
Q Consensus 98 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~ 177 (368)
||+|+..|+.+++++|++++.++ +.+|.+|+||||+|+++|+.+++++|++.+.+.+. +|.+|+||||+|++.|+.++
T Consensus 74 Lh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~g~~~i 151 (169)
T 4gpm_A 74 LHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT-SDSDGRTPLDLAREHGNEEV 151 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999775 89999999999999999999999999999999887 99999999999999999999
Q ss_pred HHHHHHhC
Q 042244 178 ALDLLKLY 185 (368)
Q Consensus 178 ~~~Ll~~~ 185 (368)
++.|++.|
T Consensus 152 v~~Ll~~G 159 (169)
T 4gpm_A 152 VKLLEKQG 159 (169)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHCC
Confidence 99999987
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=243.71 Aligned_cols=183 Identities=18% Similarity=0.155 Sum_probs=160.3
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcc-----------------------------------------cccccCC
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDA-----------------------------------------LTAKTIA 49 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~-----------------------------------------~~~~~~~ 49 (368)
.+++.+.++|+.|++.|+.++|+.|++...+. + ...|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT-TCCCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCC
Confidence 44556778888888888888888888642210 1 23467
Q ss_pred CCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCC
Q 042244 50 PGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDS 129 (368)
Q Consensus 50 ~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 129 (368)
+|+||||+||..|+ .++++.|++.+ ..++.++.+|.||+|.|+..++.++++.|++.+.++ +.+|.+|+
T Consensus 85 ~G~TpLh~A~~~g~--------~~~v~~Ll~~~--a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~ 153 (269)
T 4b93_B 85 DGSSPLHVAALHGR--------ADLIPLLLKHG--ANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGN 153 (269)
T ss_dssp TSCCHHHHHHHTTC--------TTHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCC
T ss_pred CCCCHHHHHHHcCc--------HHHHHHHHhcC--CCcCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCC
Confidence 89999999999999 99999999998 778899999999999999999999999999998765 88999999
Q ss_pred cHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 130 LPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 130 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||+|+..|+.++++.|++.+ .+++.+|++|+||||+|+++.
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~gadvn~-~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQHGASINA-SNNKGNTALHEAVIEKHVFVVELLLLHG-ASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCSGGGSCTTC
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCc-cccCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHhCC
Confidence 999999999999999999999999886 9999999999999999999999999986 889999999999999997764
No 14
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=9.4e-31 Score=232.05 Aligned_cols=184 Identities=17% Similarity=0.141 Sum_probs=169.3
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
...+..|.||||.|+..|+.++++.|++.+.+. ...+..|.||||+|+..|+ .++++.|++.+ +..++.
T Consensus 38 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~~~~Ll~~~-~~~~~~ 106 (237)
T 3b7b_A 38 DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV--DPKDAEGSTCLHLAAKKGH--------YEVVQYLLSNG-QMDVNC 106 (237)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC--CCCCTTSCCHHHHHHHTTC--------HHHHHHHHTTT-CCCTTC
T ss_pred CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC--CCCCCCCCcHHHHHHHcCC--------HHHHHHHHhCC-CCCccc
Confidence 345667999999999999999999999986554 3458899999999999999 99999999998 777889
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHH
Q 042244 90 RDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRL 169 (368)
Q Consensus 90 ~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a 169 (368)
+|..|.||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|
T Consensus 107 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A 184 (237)
T 3b7b_A 107 QDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA-VNIHGDSPLHIA 184 (237)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC-CCTTCCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHH
Confidence 9999999999999999999999999998775 88999999999999999999999999999998886 899999999999
Q ss_pred HHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 170 IDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 170 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
++.++.++++.|++.+ .+.+.+|++|+||+|+|+++.
T Consensus 185 ~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 185 ARENRYDCVVLFLSRD-SDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp HHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHSCTTC
T ss_pred HHhCCHhHHHHHHHcC-CCCCccCCCCCCHHHHHHHHH
Confidence 9999999999999986 888999999999999998764
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=6.5e-31 Score=238.74 Aligned_cols=185 Identities=12% Similarity=-0.013 Sum_probs=152.9
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCc-----
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDP----- 84 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p----- 84 (368)
...+..|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+..
T Consensus 39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~tpL~~A~~~~~--------~~~v~~Ll~~~~~~~~~~ 108 (282)
T 1oy3_D 39 DLQNDLGQTALHLAAILGEASTVEKLYAAGAGV--LVAERGGHTALHLACRVRA--------HTCACVLLQPRPSHPRDA 108 (282)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTSCCHHHHHTTTTC--------HHHHHHHSSSCCSSCCCC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCC--------cchhHhhhccCCCCchhh
Confidence 345678999999999999999999999987654 3458899999999999999 9999999987611
Q ss_pred ----------------------------------------hhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccc
Q 042244 85 ----------------------------------------QTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKR 124 (368)
Q Consensus 85 ----------------------------------------~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~ 124 (368)
..++.+|..|+||||+|+..|+.+++++|++++.++ +.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~ 187 (282)
T 1oy3_D 109 SDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL-NKP 187 (282)
T ss_dssp -----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCC
T ss_pred HHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCC
Confidence 125677889999999999999999999999999876 566
Q ss_pred CC-CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHH
Q 042244 125 DT-LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNAL 203 (368)
Q Consensus 125 d~-~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~ 203 (368)
+. .|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||+|+..++.++++.|++.+ ...+.+|.+|.||++.+
T Consensus 188 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTA-RMYGGRTPLGSALLRPNPILARLLRAHG-APEPEDGGDKLSPCSSS 265 (282)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHTSSCHHHHHHHHHTT-CCCCCCC----------
T ss_pred CCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc-cccCCCCHHHHHHHcCCcHHHHHHHHcC-CCcCcCCCccccccccc
Confidence 64 599999999999999999999999999887 9999999999999999999999999987 88999999999999998
Q ss_pred hcCC
Q 042244 204 AEKP 207 (368)
Q Consensus 204 ~~~~ 207 (368)
....
T Consensus 266 ~~~~ 269 (282)
T 1oy3_D 266 GSDS 269 (282)
T ss_dssp ----
T ss_pred CCcc
Confidence 7754
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=2.2e-30 Score=230.00 Aligned_cols=184 Identities=14% Similarity=0.064 Sum_probs=157.3
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHc---CCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhh
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTN---DPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTL 87 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~---~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~ 87 (368)
..+..|.||||.|++.|+.++++.|++. .+... ...|..|.||||+|+..|+ .++++.|++.+ ..+
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~ 72 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTL--------PSVVRLLVTAG--ASP 72 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTT--CCT
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCC--------HHHHHHHHHcC--CCc
Confidence 4567899999999999999999999972 33333 4458889999999999999 99999999987 778
Q ss_pred hchhcCCCcHHHHHHHcCCHHHHHHHHhhCCC---CccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccC-CCCc
Q 042244 88 EQRDDIGYTALYQCAVKGNLRALKVLVKYNPD---LTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSG-NDGA 163 (368)
Q Consensus 88 ~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~---~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~g~ 163 (368)
+.+|..|+||||+|+..|+.+++++|++.++. ..+..|..|+||||+|+..|+.+++++|++.+.+... .+ .+|.
T Consensus 73 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~g~ 151 (241)
T 1k1a_A 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA-VDIKSGR 151 (241)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTTCC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-ccccCCC
Confidence 88899999999999999999999999998762 3477888999999999999999999999999888776 55 7899
Q ss_pred hHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 164 NMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 164 t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
||||.|+..|+.++++.|++.+ .+.+.+|.+|+||+|+|++..
T Consensus 152 t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 152 SPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999999999886 788888999999999987753
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=6.7e-31 Score=237.21 Aligned_cols=178 Identities=12% Similarity=0.108 Sum_probs=116.2
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
.+..|.||||.|+..|+.++++.|++.+.+. ...|.+|+||||+|+..|+ .++++.|++.+ ..++ .+
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~-~~ 98 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKHGAQV--NGVTADWHTPLFNACVSGS--------WDCVNLLLQHG--ASVQ-PE 98 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--CCSS-CS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCC--------HHHHHHHHHCC--CCCC-CC
Confidence 3445666666666666666666666654333 2335666666666666666 66777777665 3333 23
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHH
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLID 171 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~ 171 (368)
.+|.||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+.+|+.+++++|++.+.+.+ .+.+|+||||.|+.
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~Lh~A~~ 175 (261)
T 2xai_A 99 SDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVAR 175 (261)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT--CCBTTBCHHHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCCCCChHHHHHH
Confidence 44667777777777777777777766544 6666777777777777777777777777766654 36667777777777
Q ss_pred hCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 172 ATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 172 ~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
.++.++++.|++.+ .+.+.+|.+|+||+|+|+++
T Consensus 176 ~~~~~~v~~Ll~~g-ad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 176 TASEELACLLMDFG-ADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp HTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSCTT
T ss_pred cCCHHHHHHHHHcC-CCCCCcCCCCCChhhhcccc
Confidence 77777777777664 66667777777777776644
No 18
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=234.17 Aligned_cols=176 Identities=13% Similarity=0.083 Sum_probs=159.1
Q ss_pred cCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCC
Q 042244 15 ARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIG 94 (368)
Q Consensus 15 ~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G 94 (368)
+|+||||.|++.|+.++++.|++.+.+. ...|.+|.||||+|+..|+ .++++.|++.+ ..++.+|.+|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~~~g 69 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV--NIITADHVSPLHEACLGGH--------LSCVKILLKHG--AQVNGVTADW 69 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTCCCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTTS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCC--------HHHHHHHHHCC--CCCCCCCCCC
Confidence 6899999999999999999999986554 4458899999999999999 99999999998 7889999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCc
Q 042244 95 YTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATL 174 (368)
Q Consensus 95 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~ 174 (368)
+||||+|+..|+.+++++|++++.+. + .+.+|+||||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|+..++
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 70 HTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDH-KISHLGTPLYLACENQQ 146 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTTBCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHhCC
Confidence 99999999999999999999998775 2 456799999999999999999999999998886 99999999999999999
Q ss_pred hHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 175 YDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 175 ~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
.++++.|++.+ .+.+. |.+|+||+|+|++..
T Consensus 147 ~~~v~~Ll~~g-~~~~~-~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 147 RACVKKLLESG-ADVNQ-GKGQDSPLHAVARTA 177 (261)
T ss_dssp HHHHHHHHHHT-CCTTC-CBTTBCHHHHHHHHT
T ss_pred HHHHHHHHHcC-CCCCC-CCCCCChHHHHHHcC
Confidence 99999999987 55553 889999999998764
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.4e-30 Score=231.14 Aligned_cols=184 Identities=17% Similarity=0.087 Sum_probs=165.6
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCc--hhh
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDP--QTL 87 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p--~~~ 87 (368)
...+..|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+.+ ..+
T Consensus 40 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~~~~--------~~~~~~Ll~~~~~~~~~~ 109 (241)
T 1k1a_A 40 DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP--MALDRHGQTAAHLACEHRS--------PTCLRALLDSAAPGTLDL 109 (241)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHHSCTTSCCT
T ss_pred CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCCHHHHHHHcCC--------HHHHHHHHHcCCCccccc
Confidence 344567999999999999999999999986554 3448899999999999999 9999999999821 167
Q ss_pred hchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccC-CCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHH
Q 042244 88 EQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRD-TLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANML 166 (368)
Q Consensus 88 ~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 166 (368)
+.+|..|.||||+|+..|+.+++++|++.+.+. +..| ..|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+|||
T Consensus 110 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L 187 (241)
T 1k1a_A 110 EARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA-QMYSGSSAL 187 (241)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-BCTTSCBHH
T ss_pred cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHH
Confidence 888999999999999999999999999998776 5566 7899999999999999999999999998886 999999999
Q ss_pred HHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 167 SRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 167 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
|.|+..|+.++++.|++.+ .+.+.+|.+|+||+|+|+++
T Consensus 188 ~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 188 HSASGRGLLPLVRTLVRSG-ADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCTTTTCSSH
T ss_pred HHHHHcCCHHHHHHHHhcC-CCCCCcCCCCCCHHHHHHhc
Confidence 9999999999999999986 88899999999999998764
No 20
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=9.9e-32 Score=238.61 Aligned_cols=184 Identities=15% Similarity=0.020 Sum_probs=161.0
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCc---ccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhh
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPD---ALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTL 87 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~---~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~ 87 (368)
..+..|.||||.|+..|+.++++.|++..+. .+ ...|..|.||||+|+..|+ .++++.|++.+ ..+
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~ 71 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFL-NFQNNLQQTPLHLAVITNQ--------PEIAEALLGAG--CDP 71 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCC-CCCCTTCCCHHHHHHHTTC--------HHHHHCCCSCC--CCS
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHh-hccCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCC
Confidence 4567899999999999999999999987543 23 4558899999999999999 99999999998 778
Q ss_pred hchhcCCCcHHHHHHHcCCHHHHHHHHhhCCC-----CccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCC-C
Q 042244 88 EQRDDIGYTALYQCAVKGNLRALKVLVKYNPD-----LTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGN-D 161 (368)
Q Consensus 88 ~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~-----~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~ 161 (368)
+.+|..|+||||+|+..|+.+++++|++.+.+ ..+..|..|+||||+|+.+|+.+++++|++.+.+... ++. +
T Consensus 72 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~ 150 (236)
T 1ikn_D 72 ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA-QEPCN 150 (236)
T ss_dssp CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTT
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCC
Confidence 89999999999999999999999999998753 3577888999999999999999999999999998886 776 9
Q ss_pred CchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 162 GANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 162 g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|+||||+|+..|+.+++++|++.+ ...+.+|.+|+||+|+|+++.
T Consensus 151 g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 151 GRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccC
Confidence 999999999999999999999986 889999999999999988764
No 21
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.9e-30 Score=218.95 Aligned_cols=170 Identities=10% Similarity=-0.005 Sum_probs=151.1
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCC
Q 042244 16 RYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGY 95 (368)
Q Consensus 16 g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~ 95 (368)
+.||||.|++.|+.+.++.+++..+... ...|..|.||||+|+..|+ .++++.|++.+ ..++.+|..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~~~g~ 70 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLV-NKPDERGFTPLIWASAFGE--------IETVRFLLEWG--ADPHILAKERE 70 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGG-GCCCTTSCCHHHHHHHTTC--------HHHHHHHHHHT--CCTTCCCTTCC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccc-cCCCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCchhhcccCC
Confidence 4689999999999999999999988766 5668999999999999999 99999999998 77899999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCch
Q 042244 96 TALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLY 175 (368)
Q Consensus 96 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~ 175 (368)
||||+|+..|+.+++++|++++.++ +.+|.+|+||||+|+..|+.+++++|++.+.+... +|.+|+||||+|+..++.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 71 SALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT-EADSGYTPMDLAVALGYR 148 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHhCcH
Confidence 9999999999999999999998765 88999999999999999999999999999998886 999999999999999999
Q ss_pred HHHHHHHHhCCcccccCCCCCCcH
Q 042244 176 DVALDLLKLYPTIGRDNIDSRRIV 199 (368)
Q Consensus 176 ~~~~~Ll~~~~~~~~~~~~~g~Tp 199 (368)
++++.|++.+ .....+|..|.||
T Consensus 149 ~~~~~L~~~~-~~~~~~~~~~~~p 171 (172)
T 3v30_A 149 KVQQVIENHI-LKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHH-HHHSCC-------
T ss_pred HHHHHHHHHH-HHHhcccCCCCCC
Confidence 9999999987 6667777778776
No 22
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=8.7e-30 Score=233.03 Aligned_cols=181 Identities=12% Similarity=0.074 Sum_probs=161.3
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
...+..|+||||.|+..|+.++++.|++.+.+. ...|.+|+||||+|+..|+ .++++.|++.+ ..++.
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--a~~~~ 120 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV--NIITADHVSPLHEACLGGH--------LSCVKILLKHG--AQVNG 120 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS--CEECTTCCCHHHHHHHTTC--------HHHHHHHHHTT--CCSSC
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHCCc--------HHHHHHHHHCC--CCCCC
Confidence 346778999999999999999999999986654 4458899999999999999 99999999998 77889
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHH
Q 042244 90 RDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRL 169 (368)
Q Consensus 90 ~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a 169 (368)
+|..|+||||+|+..|+.+++++|++.+.+. + .+.+|.||||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|
T Consensus 121 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A 197 (285)
T 3d9h_A 121 VTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDH-KISHLGTPLYLA 197 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTC-CBTTTBCHHHHH
T ss_pred CCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHH
Confidence 9999999999999999999999999998765 3 345699999999999999999999999988876 899999999999
Q ss_pred HHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 170 IDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 170 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
+..|+.++++.|++.+ ...+ .|.+|+||||+|++..
T Consensus 198 ~~~~~~~~v~~Ll~~g-a~~~-~~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 198 CENQQRACVKKLLESG-ADVN-QGKGQDSPLHAVVRTA 233 (285)
T ss_dssp HHTTCHHHHHHHHHTT-CCTT-CCBTTBCHHHHHHHTT
T ss_pred HHcCcHHHHHHHHHCC-CCCC-CCCCCCCHHHHHHHcC
Confidence 9999999999999886 5555 4888999999998864
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=2.7e-30 Score=237.06 Aligned_cols=179 Identities=14% Similarity=0.088 Sum_probs=154.7
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
.+..|.||||.|+..|+.+.++.|++.+.+. ...|.+|.||||+||..|+ .++++.|++.+ ..++.+|
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--a~~~~~~ 103 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADI--NYANVDGLTALHQACIDDN--------VDMVKFLVENG--ANINQPD 103 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCT--TCBCTTCCBHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCC
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHcCC--------HHHHHHHHHCC--CCCCCCC
Confidence 4567889999999999999999999987664 4458899999999999999 99999999988 7788999
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccc------------------------------------------------
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNK------------------------------------------------ 123 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~------------------------------------------------ 123 (368)
..|+||||+|+..|+.+++++|++++.+. +.
T Consensus 104 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 182 (299)
T 1s70_B 104 NEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDAR 182 (299)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHH
Confidence 99999999999999999999999987543 22
Q ss_pred ------------cCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCccccc
Q 042244 124 ------------RDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRD 191 (368)
Q Consensus 124 ------------~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~ 191 (368)
.+..|.||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||+|+..|+.++++.|++.+ .+.+.
T Consensus 183 ~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~ 260 (299)
T 1s70_B 183 QWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI-KDYDGWTPLHAAAHWGKEEACRILVENL-CDMEA 260 (299)
T ss_dssp HHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTC
T ss_pred HHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCCC
Confidence 234678888889999999999999988888776 8888999999999999999999888886 77888
Q ss_pred CCCCCCcHHHHHhc
Q 042244 192 NIDSRRIVLNALAE 205 (368)
Q Consensus 192 ~~~~g~Tpl~l~~~ 205 (368)
+|..|+||+|+|.+
T Consensus 261 ~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 261 VNKVGQTAFDVADE 274 (299)
T ss_dssp CCTTSCCTTTSCCS
T ss_pred cCCCCCCHHHHHHH
Confidence 88999999998755
No 24
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=3.9e-30 Score=235.34 Aligned_cols=179 Identities=12% Similarity=0.109 Sum_probs=161.8
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR 90 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~ 90 (368)
..+..|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ ..++.
T Consensus 87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~- 153 (285)
T 3d9h_A 87 IITADHVSPLHEACLGGHLSCVKILLKHGAQV--NGVTADWHTPLFNACVSGS--------WDCVNLLLQHG--ASVQP- 153 (285)
T ss_dssp EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS--SCCCTTCCCHHHHHHHHTC--------HHHHHHHHHTT--CCSSC-
T ss_pred CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCH--------HHHHHHHHHCC--CCCCC-
Confidence 45667999999999999999999999986554 3458899999999999999 99999999998 44443
Q ss_pred hcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHH
Q 042244 91 DDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLI 170 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~ 170 (368)
+.+|.||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+.+|+.+++++|++.+.+.+ .|.+|+||||+|+
T Consensus 154 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~ 230 (285)
T 3d9h_A 154 ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVV 230 (285)
T ss_dssp SCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHH
Confidence 455999999999999999999999998765 8899999999999999999999999999988875 5889999999999
Q ss_pred HhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 171 DATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 171 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
..++.+++++|++.+ .+.+.+|.+|+||+|+|+++
T Consensus 231 ~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 231 RTASEELACLLMDFG-ADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp HTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSCTT
T ss_pred HcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHhcCc
Confidence 999999999999986 88999999999999999854
No 25
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.3e-29 Score=236.97 Aligned_cols=183 Identities=16% Similarity=0.030 Sum_probs=124.6
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
...+..|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ ..++.
T Consensus 52 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~--------~~iv~~Ll~~g--~~~~~ 119 (351)
T 3utm_A 52 HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV--HAKDKGGLVPLHNACSYGH--------YEVTELLLKHG--ACVNA 119 (351)
T ss_dssp CCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCcHHHHHHHCCC--------HHHHHHHHHCC--CCCCC
Confidence 344567899999999999999999999886554 3448889999999999999 88889888887 66788
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCc------------------------------------------------
Q 042244 90 RDDIGYTALYQCAVKGNLRALKVLVKYNPDLT------------------------------------------------ 121 (368)
Q Consensus 90 ~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~------------------------------------------------ 121 (368)
+|..|.||||+|+..|+.+++++|++++.+..
T Consensus 120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 199 (351)
T 3utm_A 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLA 199 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHH
Confidence 88888888888888888888888888754320
Q ss_pred -----cccCCCCCcHHHHHHhh---CCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCC
Q 042244 122 -----NKRDTLDSLPVIQAAYH---GHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNI 193 (368)
Q Consensus 122 -----~~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~ 193 (368)
...+..|+||||+|+.. +..+++++|++.+.+.+. +|.+|+||||.|+..|+.++++.|++.+ .+.+.+|
T Consensus 200 ~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d 277 (351)
T 3utm_A 200 LEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNE-KNKDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALD 277 (351)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred hhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCC-cCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcC
Confidence 01223445555555555 234555555555555443 5555555555555555555555555544 5555555
Q ss_pred CCCCcHHHHHhcC
Q 042244 194 DSRRIVLNALAEK 206 (368)
Q Consensus 194 ~~g~Tpl~l~~~~ 206 (368)
..|+||||+|++.
T Consensus 278 ~~g~t~L~~A~~~ 290 (351)
T 3utm_A 278 SLGQTALHRAALA 290 (351)
T ss_dssp TTSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHc
Confidence 5555555555443
No 26
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=6.7e-30 Score=241.45 Aligned_cols=190 Identities=17% Similarity=0.164 Sum_probs=152.3
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCccccc----------------------
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVES---------------------- 68 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~---------------------- 68 (368)
..+..|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+||..|+.++++
T Consensus 15 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~ 92 (364)
T 3ljn_A 15 KSDDENMEKIHVAARKGQTDEVRRLIETGVSP--TIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAV 92 (364)
T ss_dssp -CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHH
Confidence 34455677777777777777777777764433 233666777777777777744430
Q ss_pred -CChHHHHHHHHhc----CCchhhhc-----------------hhcCCCcHHHHHHHcC--CHHHHHHHHhhCCCCcccc
Q 042244 69 -DDATCLLDKLASK----VDPQTLEQ-----------------RDDIGYTALYQCAVKG--NLRALKVLVKYNPDLTNKR 124 (368)
Q Consensus 69 -~~~~~~v~~Ll~~----~~p~~~~~-----------------~d~~G~tpLh~A~~~g--~~~~v~~Ll~~~~~~~~~~ 124 (368)
.|+.++++.|++. + ..++. +|..|.||||+|+..| +.+++++|++.+.++ +.+
T Consensus 93 ~~g~~~~v~~Ll~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~ 169 (364)
T 3ljn_A 93 MANKTDLVVALVEGAKERG--QMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAK 169 (364)
T ss_dssp HTTCHHHHHHHHHHHHHHT--CCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCC
T ss_pred HcCCHHHHHHHHHhccccC--CCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-ccc
Confidence 1336777777766 3 22333 8889999999999999 999999999998765 889
Q ss_pred CCCCCcHHHHHHhhCCHHHHHHHHhhCCC-----CccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcH
Q 042244 125 DTLDSLPVIQAAYHGHKDTFQYLREVTHG-----VDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIV 199 (368)
Q Consensus 125 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~-----~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tp 199 (368)
|.+|+||||+|+.+|+.+++++|++.+.+ .+. .|.+|+||||+|+..|+.++++.|++.+ .+.+.+|.+|.||
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tp 247 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY-ANKQGNSHLHWAILINWEDVAMRFVEMG-IDVNMEDNEHTVP 247 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC-CCTTCCCTTHHHHTTTCHHHHHHHHTTT-CCTTCCCTTSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCH
Confidence 99999999999999999999999999887 555 8999999999999999999999999986 8889999999999
Q ss_pred HHHHhcCC
Q 042244 200 LNALAEKP 207 (368)
Q Consensus 200 l~l~~~~~ 207 (368)
||+|++..
T Consensus 248 L~~A~~~g 255 (364)
T 3ljn_A 248 LYLSVRAA 255 (364)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 99998874
No 27
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=4.9e-30 Score=230.47 Aligned_cols=179 Identities=17% Similarity=0.110 Sum_probs=153.7
Q ss_pred cCChHHHHHHHhCCHHHHH----HHHHcCCccccc---ccCCCCCcHHHHHHHc---CCcccccCChHHHHHHHHhcCCc
Q 042244 15 ARYWPLYRMIEKNDWRGVE----DFVTNDPDALTA---KTIAPGSMTIFHAIVE---LWVDVESDDATCLLDKLASKVDP 84 (368)
Q Consensus 15 ~g~t~Lh~A~~~G~~~~v~----~Ll~~~p~~~~~---~~~~~g~tpLh~A~~~---g~~~~~~~~~~~~v~~Ll~~~~p 84 (368)
.|.||||.|++.|+.+.++ .+++.+.+.. . ..|..|+||||+|+.. |+ .++++.|++.+
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~-~~~~~~d~~g~t~L~~A~~~~~~g~--------~~~v~~Ll~~g-- 69 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLT-DSAYTEGSTGKTCLMKAVLNLQDGV--------NACIMPLLQID-- 69 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTT-SGGGSBTTTTBCHHHHHHHTCBTTB--------CTTHHHHHHHH--
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCHHHHHHHccccch--------HHHHHHHHhcC--
Confidence 4789999999999998554 4444554432 2 2588999999999999 99 99999999987
Q ss_pred hhhh-----------chhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCC-------------CCcHHHHHHhhCC
Q 042244 85 QTLE-----------QRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTL-------------DSLPVIQAAYHGH 140 (368)
Q Consensus 85 ~~~~-----------~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~-------------G~tpLh~Aa~~g~ 140 (368)
...+ .+|..|+||||+|+..|+.+++++|++++.++ +.+|.. |+||||+|+..|+
T Consensus 70 ~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~ 148 (256)
T 2etb_A 70 KDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQ 148 (256)
T ss_dssp HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC
T ss_pred CcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCC
Confidence 4433 23478999999999999999999999998775 677765 9999999999999
Q ss_pred HHHHHHHHh---hCCCCccccCCCCchHHHHHHH--hCchH-------HHHHHHHhCCccc-------ccCCCCCCcHHH
Q 042244 141 KDTFQYLRE---VTHGVDIYSGNDGANMLSRLID--ATLYD-------VALDLLKLYPTIG-------RDNIDSRRIVLN 201 (368)
Q Consensus 141 ~~~v~~Ll~---~~~~~~~~~~~~g~t~Lh~a~~--~~~~~-------~~~~Ll~~~~~~~-------~~~~~~g~Tpl~ 201 (368)
.+++++|++ .+.+.+. +|.+|+||||+|+. .++.+ +++.|++.+ .+. +.+|.+|+||+|
T Consensus 149 ~~~v~~Ll~~~~~ga~~n~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 149 WDVVTYLLENPHQPASLEA-TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-ARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp HHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCHHH
T ss_pred HHHHHHHHhccccCCCcCc-cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-CCcccccccccccCCCCCCHHH
Confidence 999999999 8888876 99999999999999 77888 999999987 666 889999999999
Q ss_pred HHhcCC
Q 042244 202 ALAEKP 207 (368)
Q Consensus 202 l~~~~~ 207 (368)
+|+++.
T Consensus 227 ~A~~~g 232 (256)
T 2etb_A 227 LAAKEG 232 (256)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 998874
No 28
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=3.1e-30 Score=236.06 Aligned_cols=180 Identities=18% Similarity=0.062 Sum_probs=162.6
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
...+..|.||||.|+..|+.++++.|++.+.+.. ..+|+||||+|+..|+ .++++.|++.+ ..++.
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--a~~~~ 90 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKN----LLENEFPLHQAATLED--------TKIVKILLFSG--LDDSQ 90 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS----CCTTCCHHHHHTTSSS--------CHHHHHHHHTT--CCTTC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC----CCCCCCHHHHHHHcCC--------HHHHHHHHHCC--CCCCC
Confidence 4556789999999999999999999999976653 2259999999999999 99999999998 77889
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCC-CcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHH
Q 042244 90 RDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLD-SLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSR 168 (368)
Q Consensus 90 ~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G-~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 168 (368)
+|..|+||||+|+..|+.+++++|++++.+. +.+|..| +||||+|+..|+.+++++|++.+++.. ...+|+||||.
T Consensus 91 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~ 167 (285)
T 3kea_A 91 FDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DLAILLSCIHI 167 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC--CCSTHHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc--cccCCccHHHH
Confidence 9999999999999999999999999998765 8899999 899999999999999999999987762 22399999999
Q ss_pred HHHhCchHHHHHHHHhCCcccccCCCCCCcH-HHHHhcCC
Q 042244 169 LIDATLYDVALDLLKLYPTIGRDNIDSRRIV-LNALAEKP 207 (368)
Q Consensus 169 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tp-l~l~~~~~ 207 (368)
|+..|+.++++.|++.+ .+.+.+|.+|+|| +|+|++..
T Consensus 168 A~~~g~~~~v~~Ll~~g-ad~n~~~~~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 168 TIKNGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAIDNK 206 (285)
T ss_dssp HHHTTCHHHHHHHHHHH-HHTCTTCCCBCCTTHHHHHHHT
T ss_pred HHHcChHHHHHHHHHcC-CCCCcccCCCCChHHHHHHHcC
Confidence 99999999999999986 8899999999998 99998754
No 29
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=4.8e-29 Score=226.16 Aligned_cols=181 Identities=18% Similarity=0.129 Sum_probs=143.0
Q ss_pred ccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch---
Q 042244 14 CARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR--- 90 (368)
Q Consensus 14 ~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~--- 90 (368)
..|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ ..++..
T Consensus 70 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~~~~Ll~~g--~~~~~~~~~ 137 (285)
T 1wdy_A 70 KNGATPFLLAAIAGSVKLLKLFLSKGADV--NECDFYGFTAFMEAAVYGK--------VKALKFLYKRG--ANVNLRRKT 137 (285)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCT--TCBCTTCCBHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCcccCCHHHHHHHhCC--------HHHHHHHHHhC--CCccccccc
Confidence 34445555555555555555555543332 2224455555555555555 88888888887 444444
Q ss_pred -------hcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCC----HHHHHHHHhhCCCCccccC
Q 042244 91 -------DDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGH----KDTFQYLREVTHGVDIYSG 159 (368)
Q Consensus 91 -------d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~----~~~v~~Ll~~~~~~~~~~~ 159 (368)
|..|.||||+|+..|+.+++++|++.....++.+|..|+||||+|+..++ .+++++|++.+.+.+. +|
T Consensus 138 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~-~~ 216 (285)
T 1wdy_A 138 KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV-RG 216 (285)
T ss_dssp CHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC-CC
T ss_pred HHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCC-cC
Confidence 78899999999999999999999998444558899999999999999999 8999999999998886 99
Q ss_pred CCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 160 NDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 160 ~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
.+|+||||.|++.|+.++++.|++..+...+.+|.+|+||+|+|++..
T Consensus 217 ~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 999999999999999999999999666899999999999999998864
No 30
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=6.2e-29 Score=225.44 Aligned_cols=182 Identities=16% Similarity=0.145 Sum_probs=161.0
Q ss_pred ccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcC
Q 042244 14 CARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDI 93 (368)
Q Consensus 14 ~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~ 93 (368)
.+|.||||.|++.|+.+.++.|++.+++.. ...+..|+||||+|+..|+ .++++.|++.+ ..++.+|..
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~~~ 71 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVN-FQEEEGGWTPLHNAVQMSR--------EDIVELLLRHG--ADPVLRKKN 71 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTTCCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCCTT
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcc-cccCCCCCcHHHHHHHcCC--------HHHHHHHHHcC--CCCcccCCC
Confidence 457899999999999999999999877664 4447789999999999999 99999999998 678888999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCcccc----------CCCCc
Q 042244 94 GYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYS----------GNDGA 163 (368)
Q Consensus 94 G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~----------~~~g~ 163 (368)
|.||||+|+..|+.+++++|++++.+. +.+|..|+||||+|+..|+.+++++|++.+.+... . +..|.
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~~~~~~~~~g~ 149 (285)
T 1wdy_A 72 GATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNL-RRKTKEDQERLRKGGA 149 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCCCHHHHHTTCCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccc-ccccHHHHHhhccCCC
Confidence 999999999999999999999998765 78899999999999999999999999999887665 3 78899
Q ss_pred hHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCCC
Q 042244 164 NMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKPY 208 (368)
Q Consensus 164 t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~~ 208 (368)
||||.|+..|+.+++++|++..+...+.+|..|.||+|.++....
T Consensus 150 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 194 (285)
T 1wdy_A 150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD 194 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSC
T ss_pred cHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccc
Confidence 999999999999999999988668888999999999999887643
No 31
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=4.9e-29 Score=220.56 Aligned_cols=183 Identities=15% Similarity=0.043 Sum_probs=157.6
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR 90 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~ 90 (368)
..+..|.||||.|++.|+.++++.|++..++.. ...+..|.||||+|+..|+ .++++.|++.+ ..++.+
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~ 105 (240)
T 3eu9_A 37 QPDKENVTLLHWAAINNRIDLVKYYISKGAIVD-QLGGDLNSTPLHWATRQGH--------LSMVVQLMKYG--ADPSLI 105 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTTBCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCC
T ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcch-hhcCCcCCChhHHHHHcCC--------HHHHHHHHHcC--CCCccc
Confidence 345678899999999999999999998877654 4445668899999999999 99999999987 677888
Q ss_pred hcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCC-HHHHHHHHhhCCCCccccCC-CCchHHHH
Q 042244 91 DDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGH-KDTFQYLREVTHGVDIYSGN-DGANMLSR 168 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~-~~~v~~Ll~~~~~~~~~~~~-~g~t~Lh~ 168 (368)
|..|.||||+|+..|+.+++++|++++.+. +.+|.+|.||||+|+.+++ .+++++|++.+.+... .+. +|+||||.
T Consensus 106 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~-~~~~~g~t~L~~ 183 (240)
T 3eu9_A 106 DGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNL-GDKYHKNTALHW 183 (240)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTC-CCTTTCCCHHHH
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcch-hhccCCCcHHHH
Confidence 899999999999999999999999988664 7888899999999997776 7889999998888776 555 89999999
Q ss_pred HHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 169 LIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 169 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|+..|+.+++++|++.+ ...+.+|.+|+||+|+|++..
T Consensus 184 A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 184 AVLAGNTTVISLLLEAG-ANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp HHHHTCHHHHHHHHHHT-CCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 99999999999999987 888899999999999998864
No 32
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=6.2e-30 Score=232.13 Aligned_cols=186 Identities=14% Similarity=0.145 Sum_probs=155.3
Q ss_pred chhhhccCChHHHHHHHhCCHHHHHHHHHc----CCccc--ccccCCCCCcHHHHHHHc---CCcccccCChHHHHHHHH
Q 042244 9 EEDEYCARYWPLYRMIEKNDWRGVEDFVTN----DPDAL--TAKTIAPGSMTIFHAIVE---LWVDVESDDATCLLDKLA 79 (368)
Q Consensus 9 ~~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~----~p~~~--~~~~~~~g~tpLh~A~~~---g~~~~~~~~~~~~v~~Ll 79 (368)
.++.+..|.||||.|++.|+.+.++.|++. +.+.. ....|..|+||||+|+.. |+ .++++.|+
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~--------~~~v~~Ll 77 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQ--------NDTIALLL 77 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTB--------CHHHHHHH
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCC--------hHHHHHHH
Confidence 345678899999999999999999999974 22211 113478999999999987 88 99999999
Q ss_pred hcCCchh-------hh----chhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC--------------CCCcHHHH
Q 042244 80 SKVDPQT-------LE----QRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT--------------LDSLPVIQ 134 (368)
Q Consensus 80 ~~~~p~~-------~~----~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~--------------~G~tpLh~ 134 (368)
+.+ .. ++ .+|..|+||||+|+..|+.+++++|++++.++ +.+|. .|+||||+
T Consensus 78 ~~g--a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~ 154 (273)
T 2pnn_A 78 DVA--RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSL 154 (273)
T ss_dssp HHH--HHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHH
T ss_pred Hhh--ccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHH
Confidence 987 32 22 26678999999999999999999999998765 66665 79999999
Q ss_pred HHhhCCHHHHHHHHh---hCCCCccccCCCCchHHHHHHHhCc---------hHHHHHHHHhCCcccc-------cCCCC
Q 042244 135 AAYHGHKDTFQYLRE---VTHGVDIYSGNDGANMLSRLIDATL---------YDVALDLLKLYPTIGR-------DNIDS 195 (368)
Q Consensus 135 Aa~~g~~~~v~~Ll~---~~~~~~~~~~~~g~t~Lh~a~~~~~---------~~~~~~Ll~~~~~~~~-------~~~~~ 195 (368)
|+.+|+.+++++|++ .+.+.+. +|.+|+||||+|+..++ .++++.|++.+ ...+ .+|.+
T Consensus 155 A~~~g~~~~v~~Ll~~~~~gad~~~-~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~n~~~~~~~~~d~~ 232 (273)
T 2pnn_A 155 AACTNQLAIVKFLLQNSWQPADISA-RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-AKLHPTLKLEEITNRK 232 (273)
T ss_dssp HHHTTCHHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTT
T ss_pred HHHcCCHHHHHHHHhcccCCCCcee-eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-hhcccccccccccCCC
Confidence 999999999999999 8888876 99999999999999888 78999999886 5553 58999
Q ss_pred CCcHHHHHhcCC
Q 042244 196 RRIVLNALAEKP 207 (368)
Q Consensus 196 g~Tpl~l~~~~~ 207 (368)
|+||||+|++..
T Consensus 233 g~TpL~~A~~~g 244 (273)
T 2pnn_A 233 GLTPLALAASSG 244 (273)
T ss_dssp SCCHHHHHHHTT
T ss_pred CCCHHHHHHHhC
Confidence 999999998874
No 33
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=5.6e-29 Score=240.74 Aligned_cols=179 Identities=17% Similarity=0.124 Sum_probs=128.5
Q ss_pred ccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcC
Q 042244 14 CARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDI 93 (368)
Q Consensus 14 ~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~ 93 (368)
..|.||||.|+..|+.++++.|++.+.+. ...+..|.||||+|+..|+ .++++.|++.+ ..++.+|..
T Consensus 210 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~~--~~~~~~~~~ 277 (437)
T 1n11_A 210 WNGYTPLHIAAKQNQVEVARSLLQYGGSA--NAESVQGVTPLHLAAQEGH--------AEMVALLLSKQ--ANGNLGNKS 277 (437)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTC--------HHHHHHHHTTT--CCTTCCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHCCC--------HHHHHHHHhcC--CCCCCCCCC
Confidence 34556666666666666666666554332 2235566666666666666 77777777776 556777777
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhC
Q 042244 94 GYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDAT 173 (368)
Q Consensus 94 G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~ 173 (368)
|.||||+|+..|+.+++++|++++.++ +.+|..|+||||+|+.+|+.+++++|++.+.+.+. +|..|+||||.|+..|
T Consensus 278 g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~-~~~~g~t~L~~A~~~g 355 (437)
T 1n11_A 278 GLTPLHLVAQEGHVPVADVLIKHGVMV-DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA-KTKLGYSPLHQAAQQG 355 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCccC-CCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHCC
Confidence 778888888778888888887776554 67777788888888888888888888887777765 7777888888888888
Q ss_pred chHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 174 LYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 174 ~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
+.+++++|++.+ ...+.+|.+|+||+++|.+..
T Consensus 356 ~~~iv~~Ll~~g-a~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 356 HTDIVTLLLKNG-ASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp CHHHHHHHHHTT-CCSCCCCSSSCCHHHHHHHTT
T ss_pred hHHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcC
Confidence 888888888765 777777888888888876653
No 34
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=3.7e-29 Score=237.59 Aligned_cols=185 Identities=14% Similarity=0.093 Sum_probs=165.0
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCc--hhh
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDP--QTL 87 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p--~~~ 87 (368)
+..+..|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ + ..+
T Consensus 160 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~--~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~~-~~~~~~ 228 (373)
T 2fo1_E 160 NAMDCDENTPLMLAVLARRRRLVAYLMKAGADP--TIYNKSERSALHQAAANRD--------FGMMVYMLNST-KLKGDI 228 (373)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTCCCHHHHHHHTTC--------HHHHHHHTTSH-HHHHTT
T ss_pred cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC--cccCCCCCCHHHHHHHCCC--------HHHHHHHHhcC-ccccCh
Confidence 345678999999999999999999999986654 3458899999999999999 99999999986 3 467
Q ss_pred hchhcCCCcHHHHHHHcC---CHHHHHHHHhhCCCCc-------cccCCCCCcHHHHHHhhCCHHHHHHHHhhC-CCCcc
Q 042244 88 EQRDDIGYTALYQCAVKG---NLRALKVLVKYNPDLT-------NKRDTLDSLPVIQAAYHGHKDTFQYLREVT-HGVDI 156 (368)
Q Consensus 88 ~~~d~~G~tpLh~A~~~g---~~~~v~~Ll~~~~~~~-------~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~-~~~~~ 156 (368)
+.+|..|.||||+|+..| +.+++++|++.+.+.. +..|..|+||||+|+.+|+.+++++|++.+ .+.+.
T Consensus 229 ~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~ 308 (373)
T 2fo1_E 229 EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK 308 (373)
T ss_dssp SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC
T ss_pred hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC
Confidence 889999999999999998 8999999999987652 236779999999999999999999999987 66665
Q ss_pred ccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 157 YSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 157 ~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
+|.+|+||||+|+..|+.++++.|++.+ .+.+.+|.+|+||+|+|+++.
T Consensus 309 -~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 309 -QDEDGKTPIMLAAQEGRIEVVMYLIQQG-ASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp -CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCSSSCCHHHHHHHTT
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccCCCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999986 889999999999999998864
No 35
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=4.4e-29 Score=209.59 Aligned_cols=157 Identities=15% Similarity=0.101 Sum_probs=146.8
Q ss_pred cCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCC
Q 042244 15 ARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIG 94 (368)
Q Consensus 15 ~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G 94 (368)
.|.||||.|++.|+.+.++.|++..++. ...|..|.||||+|+..|+ .++++.|++.+ ..++.+|..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~~~g 69 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI--NHTDEEGFTPLMWAAAHGQ--------IAVVEFLLQNG--ADPQLLGKGR 69 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCCTTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc--CCCCCCCCCHHHHHHHCCC--------HHHHHHHHHcC--CCCCCcCCCC
Confidence 5789999999999999999999987554 4558899999999999999 99999999998 7788999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCc
Q 042244 95 YTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATL 174 (368)
Q Consensus 95 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~ 174 (368)
.||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+..|+.+++++|++.+.+... +|.+|+||||+|+..|+
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 70 ESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI-ETDSGYNSMDLAVALGY 147 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCc
Confidence 99999999999999999999998765 88999999999999999999999999999998886 99999999999999999
Q ss_pred hHHHHHHHHhC
Q 042244 175 YDVALDLLKLY 185 (368)
Q Consensus 175 ~~~~~~Ll~~~ 185 (368)
.++++.|++++
T Consensus 148 ~~~~~~L~~~~ 158 (167)
T 3v31_A 148 RSVQQVIESHL 158 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999876
No 36
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=3.5e-29 Score=215.16 Aligned_cols=160 Identities=17% Similarity=0.117 Sum_probs=145.1
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
.+..|.||||.|+..|+.++++.|++..++. ...|..|.||||+|+..|+ .++++.|++.+ ..++.+|
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~ 98 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKL--EDKDIEGSTALIWAVKNNR--------LGIAEKLLSKG--SNVNTKD 98 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHHT--CCTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhcccc--ccccccCccHHHHHHHcCC--------HHHHHHHHHCC--CCCCCCC
Confidence 4667999999999999999999999986554 3448889999999999999 99999999998 6788999
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHH
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLID 171 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~ 171 (368)
..|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++.+.+... +|.+|.||||+|+.
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~ 176 (192)
T 2rfm_A 99 FSGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELGADISA-RDLTGLTAEASARI 176 (192)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHH
Confidence 99999999999999999999999998765 88999999999999999999999999999988876 89999999999999
Q ss_pred hCchHHHHHHHHhC
Q 042244 172 ATLYDVALDLLKLY 185 (368)
Q Consensus 172 ~~~~~~~~~Ll~~~ 185 (368)
.|+.+++++|++.+
T Consensus 177 ~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 177 FGRQEVIKIFTEVR 190 (192)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred hCcHHHHHHHHhcc
Confidence 99999999998764
No 37
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-28 Score=237.90 Aligned_cols=183 Identities=16% Similarity=0.038 Sum_probs=159.7
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
...+.+|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ ..++.
T Consensus 8 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~~~~~~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~ 75 (437)
T 1n11_A 8 GGGGESGLTPLHVASFMGHLPIVKNLLQRGASP--NVSNVKVETPLHMAARAGH--------TEVAKYLLQNK--AKVNA 75 (437)
T ss_dssp -------CCHHHHHHHHTCHHHHHHHHHTTCCS--CCSSSCCCCHHHHHHHHTC--------HHHHHHHHHHT--CCSSC
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCC--------HHHHHHHHhCC--CCCCC
Confidence 345678999999999999999999999985544 3347889999999999999 99999999998 77888
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHH
Q 042244 90 RDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRL 169 (368)
Q Consensus 90 ~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a 169 (368)
+|.+|+||||+|+..|+.+++++|++++.+. +..|..|+||||+|+..|+.+++++|++.+.+... .+.+|.||||.|
T Consensus 76 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A 153 (437)
T 1n11_A 76 KAKDDQTPLHCAARIGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGHVETVLALLEKEASQAC-MTKKGFTPLHVA 153 (437)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcC-CCCCCCCHHHHH
Confidence 9999999999999999999999999998765 78899999999999999999999999999887765 888999999999
Q ss_pred HHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 170 IDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 170 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
+..|+.+++++|++.+ ...+..+.+|.||+|.|+...
T Consensus 154 ~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 190 (437)
T 1n11_A 154 AKYGKVRVAELLLERD-AHPNAAGKNGLTPLHVAVHHN 190 (437)
T ss_dssp HHTTCHHHHHHHHHTT-CCTTCCCSSCCCHHHHHHHTT
T ss_pred HHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcC
Confidence 9999999999999886 778888999999999998764
No 38
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.9e-28 Score=206.43 Aligned_cols=160 Identities=23% Similarity=0.187 Sum_probs=145.4
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
....+.++||.|++.|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ ..++.+|
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~ 77 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADV--NAEDASGWTPLHLAAFNGH--------LEIVEVLLKNG--ADVNAVD 77 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCccC
Confidence 4556789999999999999999999987665 3458899999999999999 99999999998 7788999
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHH
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLID 171 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~ 171 (368)
..|+||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+..|+.+++++|++++.+... +|.+|+||||+|+.
T Consensus 78 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 78 HAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA-QDKFGKTAFDISID 155 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHH
Confidence 99999999999999999999999998765 88999999999999999999999999999998876 99999999999999
Q ss_pred hCchHHHHHHHHhC
Q 042244 172 ATLYDVALDLLKLY 185 (368)
Q Consensus 172 ~~~~~~~~~Ll~~~ 185 (368)
.++.++++.|++.+
T Consensus 156 ~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 156 NGNEDLAEILQKLN 169 (169)
T ss_dssp TTCHHHHHHHHTC-
T ss_pred hCCHHHHHHHHHcC
Confidence 99999999998753
No 39
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=2e-28 Score=211.51 Aligned_cols=165 Identities=16% Similarity=0.154 Sum_probs=150.3
Q ss_pred chhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhh
Q 042244 9 EEDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLE 88 (368)
Q Consensus 9 ~~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~ 88 (368)
....+..|.||||.|++.|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ +..++
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~~~~--------~~~~~~Ll~~~-~~~~~ 100 (201)
T 3hra_A 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI--NLQNSISDSPYLYAGAQGR--------TEILAYMLKHA-TPDLN 100 (201)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHHS-CCCTT
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCC--------HHHHHHHHhcc-Ccccc
Confidence 3445678999999999999999999999986654 3458899999999999999 99999999776 57789
Q ss_pred chhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCC-----HHHHHHHHhhCCCCccccCCCCc
Q 042244 89 QRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGH-----KDTFQYLREVTHGVDIYSGNDGA 163 (368)
Q Consensus 89 ~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~-----~~~v~~Ll~~~~~~~~~~~~~g~ 163 (368)
.+|..|.||||+|+..|+.+++++|+++++..++.+|..|+||||+|+..++ .+++++|++.+.+.+. +|.+|+
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~-~~~~g~ 179 (201)
T 3hra_A 101 KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI-KDNSGR 179 (201)
T ss_dssp CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC-CCTTSC
T ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc-cCCCCC
Confidence 9999999999999999999999999999966668999999999999999998 9999999999999887 999999
Q ss_pred hHHHHHHHhCchHHHHHHHHhC
Q 042244 164 NMLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 164 t~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
||||+|++.|+.++++.|++.+
T Consensus 180 t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 180 TAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CHHHHHHHHTCHHHHHHHHTCC
T ss_pred CHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999999998764
No 40
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=1.5e-28 Score=229.82 Aligned_cols=183 Identities=14% Similarity=0.035 Sum_probs=162.7
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
.+..+.|+||.|++.|+.+.++.++...+... ...|..|.||||+|+..|+ .++++.|++.+ ..++.+|
T Consensus 20 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~d~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~ 88 (351)
T 3utm_A 20 TGEYKKDELLEAARSGNEEKLMALLTPLNVNC-HASDGRKSTPLHLAAGYNR--------VRIVQLLLQHG--ADVHAKD 88 (351)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTC-CCSSTTCCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCC
T ss_pred eccccchhHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCccC
Confidence 45678899999999999999999998755444 4558899999999999999 99999999998 7789999
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCcc---------------
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDI--------------- 156 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~--------------- 156 (368)
..|+||||+|+..|+.+++++|++++.+. +..|..|+||||+|+.+|+.+++++|++.+.+...
T Consensus 89 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~ 167 (351)
T 3utm_A 89 KGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP 167 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSH
T ss_pred CCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhh
Confidence 99999999999999999999999998765 88999999999999999999999999999876543
Q ss_pred --------------------------------------ccCCCCchHHHHHHHh---CchHHHHHHHHhCCcccccCCCC
Q 042244 157 --------------------------------------YSGNDGANMLSRLIDA---TLYDVALDLLKLYPTIGRDNIDS 195 (368)
Q Consensus 157 --------------------------------------~~~~~g~t~Lh~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~ 195 (368)
..+..|+||||.|+.. +..++++.|++.+ ...+.+|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~ 246 (351)
T 3utm_A 168 ELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKD 246 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTT
T ss_pred hhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCC
Confidence 1346788999999998 5578999999886 888999999
Q ss_pred CCcHHHHHhcCC
Q 042244 196 RRIVLNALAEKP 207 (368)
Q Consensus 196 g~Tpl~l~~~~~ 207 (368)
|+||||+|++..
T Consensus 247 g~t~L~~A~~~g 258 (351)
T 3utm_A 247 FMTPLHVAAERA 258 (351)
T ss_dssp CCCHHHHHHHTT
T ss_pred CCCHHHHHHHcC
Confidence 999999998875
No 41
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.1e-29 Score=225.61 Aligned_cols=182 Identities=15% Similarity=0.098 Sum_probs=153.8
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHH----cCCccc--ccccCCCCCcHHHHHH---HcCCcccccCChHHHHHHHHhcCC
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVT----NDPDAL--TAKTIAPGSMTIFHAI---VELWVDVESDDATCLLDKLASKVD 83 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~----~~p~~~--~~~~~~~g~tpLh~A~---~~g~~~~~~~~~~~~v~~Ll~~~~ 83 (368)
+..+.|+||.|++.|+.+.++.+++ ...+.. ....|..|+||||+|+ ..|+ .++++.|++.+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~--------~~~v~~Ll~~g- 72 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGR--------NDTIPILLDIA- 72 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTB--------CTHHHHHHHHH-
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCC--------HHHHHHHHHhc-
Confidence 3568899999999999998777776 443332 1122477999999999 7799 99999999986
Q ss_pred chh-----------hhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccC--------------CCCCcHHHHHHhh
Q 042244 84 PQT-----------LEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRD--------------TLDSLPVIQAAYH 138 (368)
Q Consensus 84 p~~-----------~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d--------------~~G~tpLh~Aa~~ 138 (368)
.. .+.+|..|+||||+|+..|+.+++++|++++.++ +.+| .+|+||||+|+.+
T Consensus 73 -~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 150 (260)
T 3jxi_A 73 -EKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACT 150 (260)
T ss_dssp -HHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHT
T ss_pred -ccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHc
Confidence 22 3445568999999999999999999999998765 6676 6899999999999
Q ss_pred CCHHHHHHHHh---hCCCCccccCCCCchHHHHHHHhCc---------hHHHHHHHHhCCccc-------ccCCCCCCcH
Q 042244 139 GHKDTFQYLRE---VTHGVDIYSGNDGANMLSRLIDATL---------YDVALDLLKLYPTIG-------RDNIDSRRIV 199 (368)
Q Consensus 139 g~~~~v~~Ll~---~~~~~~~~~~~~g~t~Lh~a~~~~~---------~~~~~~Ll~~~~~~~-------~~~~~~g~Tp 199 (368)
|+.+++++|++ .+.+.+. +|.+|+||||+|+..++ .++++.|++.+ ... +.+|.+|+||
T Consensus 151 g~~~~v~~Ll~~~~~ga~~~~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tp 228 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQADLRR-QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-AKLFPDTNLEALLNNDGLSP 228 (260)
T ss_dssp TCHHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCH
T ss_pred CCHHHHHHHHhccccCCCCcc-cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-cccccccchhhcccCCCCCH
Confidence 99999999999 8888876 99999999999998877 68999999886 555 7799999999
Q ss_pred HHHHhcCC
Q 042244 200 LNALAEKP 207 (368)
Q Consensus 200 l~l~~~~~ 207 (368)
||+|++..
T Consensus 229 L~~A~~~g 236 (260)
T 3jxi_A 229 LMMAAKTG 236 (260)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99998874
No 42
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=8.6e-29 Score=233.85 Aligned_cols=151 Identities=12% Similarity=-0.021 Sum_probs=105.3
Q ss_pred cccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCcc--
Q 042244 45 AKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTN-- 122 (368)
Q Consensus 45 ~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~-- 122 (368)
...|.+|.||||+||..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++.+.+...
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~--------~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 83 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQ--------TDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWH 83 (364)
T ss_dssp --CCHHHHHHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBT
T ss_pred cccCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccC
Confidence 4458889999999999999 99999999998 77889999999999999999999999999998763211
Q ss_pred -------------------------------------------------ccCCCCCcHHHHHHhhC--CHHHHHHHHhhC
Q 042244 123 -------------------------------------------------KRDTLDSLPVIQAAYHG--HKDTFQYLREVT 151 (368)
Q Consensus 123 -------------------------------------------------~~d~~G~tpLh~Aa~~g--~~~~v~~Ll~~~ 151 (368)
..|.+|.||||+|+..| +.+++++|++.+
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g 163 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG 163 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 04445556666666666 556666666665
Q ss_pred CCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCc----ccccCCCCCCcHHHHHhcC
Q 042244 152 HGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPT----IGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 152 ~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~----~~~~~~~~g~Tpl~l~~~~ 206 (368)
.+.+. +|.+|+||||.|+..|+.++++.|++.+.. ..+.+|.+|.||||+|+..
T Consensus 164 a~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 164 ASPTA-KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILI 221 (364)
T ss_dssp CCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTT
T ss_pred CCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHc
Confidence 55554 555666666666666666666666655421 1555556666666665554
No 43
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.3e-28 Score=205.39 Aligned_cols=157 Identities=16% Similarity=0.137 Sum_probs=143.7
Q ss_pred cCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCC
Q 042244 15 ARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIG 94 (368)
Q Consensus 15 ~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G 94 (368)
...||||.|++.|+.+.++.|++.+++. ...|..|+||||+|+. |+ .++++.|++.+ ..++.+|..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~-~~--------~~~v~~Ll~~g--~~~~~~~~~g 70 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV--NAQNGFGRTALQVMKL-GN--------PEIARRLLLRG--ANPDLKDRTG 70 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT--TCCCTTSCCHHHHCCS-SC--------HHHHHHHHHTT--CCTTCCCTTS
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc--cccCccCccHHHHHHc-Cc--------HHHHHHHHHcC--CCCCCCCCCC
Confidence 4569999999999999999999987665 4458899999999999 99 99999999998 7788999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCc
Q 042244 95 YTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATL 174 (368)
Q Consensus 95 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~ 174 (368)
+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+.+|+.+++++|++.+.+....+|.+|+||||+|+..|+
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 149 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR 149 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC
Confidence 99999999999999999999998765 88999999999999999999999999999987533499999999999999999
Q ss_pred hHHHHHHHHhC
Q 042244 175 YDVALDLLKLY 185 (368)
Q Consensus 175 ~~~~~~Ll~~~ 185 (368)
.++++.|++++
T Consensus 150 ~~~~~~Ll~~G 160 (162)
T 1ihb_A 150 NEVVSLMQANG 160 (162)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999886
No 44
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.3e-28 Score=209.19 Aligned_cols=168 Identities=14% Similarity=0.078 Sum_probs=150.7
Q ss_pred ccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcC
Q 042244 14 CARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDI 93 (368)
Q Consensus 14 ~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~ 93 (368)
..+.++||.|++.|+.+.++.|++..+... ...|..|.||||+|+..|+ .++++.|++.+ ..++.+|..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~~~ 71 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDL-NQGDDHGFSPLHWACREGR--------SAVVEMLIMRG--ARINVMNRG 71 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCT-TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccc-cccCCCCCCHHHHHHHcCc--------HHHHHHHHHcC--CCCCCcCCC
Confidence 457899999999999999999999877655 5568999999999999999 99999999998 778999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhC
Q 042244 94 GYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDAT 173 (368)
Q Consensus 94 G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~ 173 (368)
|+||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+..|+.+++++|++.+.+... +|.+|+||||+|+..+
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 72 DDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI-CNKYGEMPVDKAKAPL 149 (179)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB-CCTTSCCGGGGSCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch-hccCCCCcHHHHHHHH
Confidence 999999999999999999999998765 88999999999999999999999999999999886 9999999999999999
Q ss_pred chHHHHHHHHhCCcccccCCCC
Q 042244 174 LYDVALDLLKLYPTIGRDNIDS 195 (368)
Q Consensus 174 ~~~~~~~Ll~~~~~~~~~~~~~ 195 (368)
+.++++.|++.+ ...+..+.+
T Consensus 150 ~~~~~~~L~~~g-~~~~~~~~~ 170 (179)
T 3f6q_A 150 RELLRERAEKMG-QNLNRIPYK 170 (179)
T ss_dssp HHHHHHHHHHTT-CCCSCBCCC
T ss_pred HHHHHHHHHHhh-cCcccCCcc
Confidence 999999999887 555544443
No 45
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=7.3e-29 Score=207.78 Aligned_cols=159 Identities=17% Similarity=0.105 Sum_probs=144.2
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhc
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDD 92 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~ 92 (368)
+..|.|+||.|++.|+.+.++.|++..+... ...+..|.||||+|+..|+ .++++.|++.+ ..++.+|.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~~ 73 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNC-RDIEGRQSTPLHFAAGYNR--------VSVVEYLLQHG--ADVHAKDK 73 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTC-CCTTTTCCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCCT
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCc-cccccCCCCHHHHHHHcCh--------HHHHHHHHhcC--CCCCccCC
Confidence 4567899999999999999999999766554 4558889999999999999 99999999998 77899999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHh
Q 042244 93 IGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDA 172 (368)
Q Consensus 93 ~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~ 172 (368)
.|+||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+.+|+.+++++|++.+.+... +|.+|+||||+|..
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~a~~- 150 (165)
T 3twr_A 74 GGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK-KNRDGNTPLDLVKD- 150 (165)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCTGGGSCT-
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCChhHhHhc-
Confidence 9999999999999999999999998765 88999999999999999999999999999998886 99999999999776
Q ss_pred CchHHHHHHHHhC
Q 042244 173 TLYDVALDLLKLY 185 (368)
Q Consensus 173 ~~~~~~~~Ll~~~ 185 (368)
++.+++++|++++
T Consensus 151 ~~~~i~~~L~~~g 163 (165)
T 3twr_A 151 GDTDIQDLLRGDA 163 (165)
T ss_dssp TCHHHHHHHHTC-
T ss_pred CChHHHHHHhhcc
Confidence 8899999998765
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=4.5e-29 Score=221.42 Aligned_cols=184 Identities=14% Similarity=0.059 Sum_probs=160.5
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCC----ch
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVD----PQ 85 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~----p~ 85 (368)
...+..|.||||.|+..|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+. +.
T Consensus 39 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~~~~~~~~~ 108 (236)
T 1ikn_D 39 NFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP--ELRDFRGNTPLHLACEQGC--------LASVGVLTQSCTTPHLHS 108 (236)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS--CCCCTTCCCHHHHHHHHTC--------HHHHHHHHHSTTTTSSSC
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCC--------HHHHHHHHhcccchhHHH
Confidence 345667999999999999999999999986554 3458899999999999999 999999999872 12
Q ss_pred hhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC-CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCch
Q 042244 86 TLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT-LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGAN 164 (368)
Q Consensus 86 ~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~-~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 164 (368)
..+..|..|.||||+|+..|+.+++++|++++.+. +.+|. +|+||||+|+..|+.+++++|++.+.+... +|.+|+|
T Consensus 109 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t 186 (236)
T 1ikn_D 109 ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR-VTYQGYS 186 (236)
T ss_dssp GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC-CCTTCCC
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-ccCCCCC
Confidence 36788889999999999999999999999999776 77777 999999999999999999999999998886 9999999
Q ss_pred HHHHHHHhCchHHHHHHHHhCCc-ccccCCCCCCcHHHHHhc
Q 042244 165 MLSRLIDATLYDVALDLLKLYPT-IGRDNIDSRRIVLNALAE 205 (368)
Q Consensus 165 ~Lh~a~~~~~~~~~~~Ll~~~~~-~~~~~~~~g~Tpl~l~~~ 205 (368)
|||+|+..++.+++++|++.+.. ....++.+|.||.+...+
T Consensus 187 pl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 187 PYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp GGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred HHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 99999999999999999998843 345788889998875443
No 47
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=4.3e-28 Score=200.70 Aligned_cols=151 Identities=19% Similarity=0.114 Sum_probs=140.3
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCC
Q 042244 16 RYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGY 95 (368)
Q Consensus 16 g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~ 95 (368)
..|+||.|++.|+.+.++.|++.+++.. .|..|.||||+|+..|+ .++++.|++.+ ..++.+|..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~~~g~ 68 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGH--------FSTTEVLLRAG--VSRDARTKVDR 68 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTC--------HHHHHHHHTTT--CCTTCCCTTCC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCCCCCCCC
Confidence 4589999999999999999999977542 48889999999999999 99999999998 67889999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCch
Q 042244 96 TALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLY 175 (368)
Q Consensus 96 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~ 175 (368)
||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+.+|+.+++++|++.+.+... +|.+|+||||+|+..|+.
T Consensus 69 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 69 TPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT-QSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999998765 88999999999999999999999999999998886 999999999999999999
Q ss_pred HHHHHH
Q 042244 176 DVALDL 181 (368)
Q Consensus 176 ~~~~~L 181 (368)
+++++|
T Consensus 147 ~i~~~L 152 (153)
T 1awc_B 147 DLAEIL 152 (153)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999865
No 48
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=3e-28 Score=215.26 Aligned_cols=166 Identities=13% Similarity=0.111 Sum_probs=146.6
Q ss_pred chhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccc---cccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCch
Q 042244 9 EEDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALT---AKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQ 85 (368)
Q Consensus 9 ~~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~---~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~ 85 (368)
....+..|.||||.|+..|+.++++.|++.+++... ...|..|.||||+|+..|+ .++++.|++.+ .
T Consensus 30 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~ 99 (232)
T 2rfa_A 30 VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQN--------VNLVRALLARG--A 99 (232)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTC--------HHHHHHHHHTT--C
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCC--------HHHHHHHHhCC--C
Confidence 344567899999999999999999999999776431 2336789999999999999 99999999998 5
Q ss_pred hhhchhc-------------CCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHH----HHHH
Q 042244 86 TLEQRDD-------------IGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTF----QYLR 148 (368)
Q Consensus 86 ~~~~~d~-------------~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v----~~Ll 148 (368)
.++.++. .|+||||+|+..|+.+++++|++++.++ +.+|.+|+||||+|+.+|+.+++ ++|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll 178 (232)
T 2rfa_A 100 SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVLHILILQPNKTFACQMYNLLL 178 (232)
T ss_dssp CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHH
T ss_pred CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCChHHHHHHHHHHH
Confidence 5555554 7999999999999999999999998765 88999999999999999999988 9999
Q ss_pred hhCCCCc-----cccCCCCchHHHHHHHhCchHHHHHHHHhC
Q 042244 149 EVTHGVD-----IYSGNDGANMLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 149 ~~~~~~~-----~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
+.+.+.. ..+|.+|+||||+|++.|+.++++.|++++
T Consensus 179 ~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 179 SYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp HTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred hcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9998763 248999999999999999999999999987
No 49
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=3.5e-28 Score=201.56 Aligned_cols=154 Identities=19% Similarity=0.147 Sum_probs=140.6
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCC
Q 042244 16 RYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGY 95 (368)
Q Consensus 16 g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~ 95 (368)
+.||||.|++.|+.+.++.|++..+... ...|..|+||||+ +..|+ .++++.|++.+ ..++.+|..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~-~~~~~--------~~~v~~Ll~~g--~~~~~~~~~g~ 69 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHP-DALNRFGKTALQV-MMFGS--------TAIALELLKQG--ASPNVQDTSGT 69 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCT-TCCCTTSCCHHHH-SCTTC--------HHHHHHHHHTT--CCTTCCCTTSC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCc-cccCCCCCcHHHH-HHcCC--------HHHHHHHHHCC--CCCCCcCCCCC
Confidence 5699999999999999999999833233 4558899999999 99999 99999999998 77899999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCch
Q 042244 96 TALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLY 175 (368)
Q Consensus 96 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~ 175 (368)
||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+.+|+.+++++|++. .+... +|.+|+||||+|+..|+.
T Consensus 70 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~-~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 70 SPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR-RDARGLTPLELALQRGAQ 146 (156)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC-CCTTSCCHHHHHHHSCCH
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC-cCCCCCCHHHHHHHcCcH
Confidence 9999999999999999999998765 88999999999999999999999999998 76665 999999999999999999
Q ss_pred HHHHHHHHh
Q 042244 176 DVALDLLKL 184 (368)
Q Consensus 176 ~~~~~Ll~~ 184 (368)
++++.|+++
T Consensus 147 ~~v~~Ll~~ 155 (156)
T 1bd8_A 147 DLVDILQGH 155 (156)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999999864
No 50
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=8.7e-28 Score=210.88 Aligned_cols=162 Identities=18% Similarity=0.146 Sum_probs=150.4
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR 90 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~ 90 (368)
..+..|.||||.|+..|+.++++.|++..+... ...+..|.||||+|+..|+ .++++.|++.+ ..++.+
T Consensus 53 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~--------~~~~~~Ll~~g--~~~~~~ 121 (223)
T 2f8y_A 53 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDL-DARMHDGTTPLILAARLAV--------EGMLEDLINSH--ADVNAV 121 (223)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCT-TCCCTTCCCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCB
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCcHHHHHHHhCc--------HHHHHHHHHcC--CCCcCc
Confidence 456789999999999999999999999877554 5558899999999999999 99999999988 778899
Q ss_pred hcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHH
Q 042244 91 DDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLI 170 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~ 170 (368)
|..|+||||+|+..|+.+++++|++++.+. +.+|..|+||||+|+.+|+.+++++|++++.+... +|..|.||+|+|+
T Consensus 122 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~ 199 (223)
T 2f8y_A 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDHFANRDI-TDHMDRLPRDIAQ 199 (223)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccccCCCHHHHHH
Confidence 999999999999999999999999998765 88999999999999999999999999999998886 9999999999999
Q ss_pred HhCchHHHHHHHHhC
Q 042244 171 DATLYDVALDLLKLY 185 (368)
Q Consensus 171 ~~~~~~~~~~Ll~~~ 185 (368)
+.++.+++++|++.+
T Consensus 200 ~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 200 ERMHHDIVRLLDEYN 214 (223)
T ss_dssp HTTCHHHHHHHHHTT
T ss_pred HhcchHHHHHHHHcC
Confidence 999999999999887
No 51
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=6.9e-29 Score=225.26 Aligned_cols=151 Identities=11% Similarity=0.043 Sum_probs=139.3
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
+..+.+|.||||.|+..|+.++++.|++.+.+. ...+.+|.||+|.|+..++ .++++.|++.+ .+++.
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~--~~~~~~g~t~l~~a~~~~~--------~~~~~~Ll~~g--~~~n~ 147 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGANA--GARNADQAVPLHLACQQGH--------FQVVKCLLDSN--AKPNK 147 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHTC--------HHHHHHHHHTT--CCSCC
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc--CccCCCCCCccccccccCh--------HHHHHHHHHCC--CCCCC
Confidence 345678999999999999999999999987665 3448899999999999999 99999999998 77899
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHH
Q 042244 90 RDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRL 169 (368)
Q Consensus 90 ~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a 169 (368)
+|..|+||||+|+..|+.+++++|++++.++ +.+|.+|+||||+|+.+|+.+++++|++.+++.+. +|.+|+||||+|
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~-~d~~G~TpL~~A 225 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV-LNKRQRTAVDCA 225 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCSGGGS
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHH
Confidence 9999999999999999999999999998775 89999999999999999999999999999999887 999999999999
Q ss_pred HHhCc
Q 042244 170 IDATL 174 (368)
Q Consensus 170 ~~~~~ 174 (368)
+++++
T Consensus 226 ~~~~~ 230 (269)
T 4b93_B 226 EQNSK 230 (269)
T ss_dssp CTTCH
T ss_pred HhCCc
Confidence 87765
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=2.4e-28 Score=227.92 Aligned_cols=177 Identities=12% Similarity=0.027 Sum_probs=142.9
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
.+..|.||||.|+..|+.++++.|++.+.+. ...|.+|+||||+|+..|+. ...++++.|++.+ ...++.+|
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~--n~~d~~g~TpLh~A~~~g~~-----~~~~~~~~ll~~~-~~~~~~~d 198 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNR--LYGDNMGESCLVKAVKSVNN-----YDSGTFEALLDYL-YPCLILED 198 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TBCCTTCCCHHHHHHHSSHH-----HHTTCHHHHHHHH-GGGGGEEC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHhccc-----ccHHHHHHHHHhh-hccccCCC
Confidence 5778999999999999999999999987655 34588999999999998870 0025677888876 56789999
Q ss_pred cCCCcHHHHHHH----cCCHHHHHHHHhhC-------------------CCCccccCCCCCcHHHHHHhhCCHHHHHHHH
Q 042244 92 DIGYTALYQCAV----KGNLRALKVLVKYN-------------------PDLTNKRDTLDSLPVIQAAYHGHKDTFQYLR 148 (368)
Q Consensus 92 ~~G~tpLh~A~~----~g~~~~v~~Ll~~~-------------------~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll 148 (368)
..|+||||+|+. .|+.++++.|++.+ ...++.+|..|+||||.|+. +++|+
T Consensus 199 ~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll 272 (327)
T 1sw6_A 199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWII 272 (327)
T ss_dssp TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHH
T ss_pred CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHH
Confidence 999999999999 89999999999872 23347889999999999986 88999
Q ss_pred hhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 149 EVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 149 ~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
+.. .+. +|.+|+||||+|+..|+.++++.|++.+ .+.+.+|.+|+||||+|+++
T Consensus 273 ~~~--~n~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 273 ANM--LNA-QDSNGDTCLNIAARLGNISIVDALLDYG-ADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHT--TTC-CCTTSCCHHHHHHHHCCHHHHHHHHHTT-CCTTCCCTTSCCGGGGTCC-
T ss_pred HhC--CCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhc
Confidence 883 443 8999999999999999999999999886 88999999999999998764
No 53
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=1.5e-28 Score=233.34 Aligned_cols=182 Identities=12% Similarity=0.040 Sum_probs=161.6
Q ss_pred ccCChHHHHHHHhCCHHHHHHHH--------HcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCch
Q 042244 14 CARYWPLYRMIEKNDWRGVEDFV--------TNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQ 85 (368)
Q Consensus 14 ~~g~t~Lh~A~~~G~~~~v~~Ll--------~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~ 85 (368)
..|.||||.|+..|+.++++.|+ +.+.+. ...|.+|.||||+|+..|+ .++++.|++.+ .
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v--n~~d~~g~TpL~~A~~~g~--------~~iv~~Ll~~g--a 190 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV--NAMDCDENTPLMLAVLARR--------RRLVAYLMKAG--A 190 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT--TCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--C
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC--cCCCCCCCCHHHHHHHcCh--------HHHHHHHHHCC--C
Confidence 67999999999999999888877 443333 4458899999999999999 99999999998 7
Q ss_pred hhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCC--CCccccCCCCCcHHHHHHhhC---CHHHHHHHHhhCCCCcc----
Q 042244 86 TLEQRDDIGYTALYQCAVKGNLRALKVLVKYNP--DLTNKRDTLDSLPVIQAAYHG---HKDTFQYLREVTHGVDI---- 156 (368)
Q Consensus 86 ~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~--~~~~~~d~~G~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~---- 156 (368)
.++.+|..|.||||+|+..|+.+++++|++.+. ..++..|.+|+||||+|+..+ +.+++++|++.+.+...
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 270 (373)
T 2fo1_E 191 DPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 270 (373)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG
T ss_pred CCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc
Confidence 788999999999999999999999999999762 234788999999999999998 89999999999887653
Q ss_pred ---ccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 157 ---YSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 157 ---~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
..|.+|.||||.|+..|+.+++++|++.++.+.+.+|.+|+||||+|++..
T Consensus 271 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g 324 (373)
T 2fo1_E 271 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 324 (373)
T ss_dssp GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcC
Confidence 257799999999999999999999999988999999999999999998864
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1.1e-28 Score=224.70 Aligned_cols=183 Identities=12% Similarity=0.092 Sum_probs=159.0
Q ss_pred ccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcC
Q 042244 14 CARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDI 93 (368)
Q Consensus 14 ~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~ 93 (368)
....+++|.|+..|+.+.++.+++...+......|.+|+||||+||..|+ .++++.|++.+ ...++.+|..
T Consensus 74 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~--------~~~v~~Ll~~g-~~~~~~~~~~ 144 (276)
T 4hbd_A 74 LACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHAN--------FPVVQQLLDSG-VCKVDKQNRA 144 (276)
T ss_dssp HHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTS-CCCTTCCCTT
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCC--------HHHHHHHHHCC-CCcCCCCCCC
Confidence 34668889999999999999998764443225558899999999999999 99999999998 4478899999
Q ss_pred CCcHHHHHH-----HcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHH
Q 042244 94 GYTALYQCA-----VKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSR 168 (368)
Q Consensus 94 G~tpLh~A~-----~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 168 (368)
|.||||+|+ ..++.++++.|++.+.. .+..|..|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||+
T Consensus 145 g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~-~d~~G~TpLh~ 222 (276)
T 4hbd_A 145 GYSPIMLTALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV-QDDDGSTALMC 222 (276)
T ss_dssp SCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHH
T ss_pred CCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-CCCCCCCHHHH
Confidence 999999999 66889999999999854 377888899999999999999999999999998886 89999999999
Q ss_pred HHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 169 LIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 169 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|+..|+.++++.|++..+.+.+.+|.+|+||+|+|++..
T Consensus 223 A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAG 261 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcC
Confidence 999999999999998555889999999999999998753
No 55
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=1.3e-27 Score=201.66 Aligned_cols=142 Identities=20% Similarity=0.204 Sum_probs=135.0
Q ss_pred cHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHH
Q 042244 53 MTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPV 132 (368)
Q Consensus 53 tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpL 132 (368)
++|+.||+.|+ .++|+.|++.+ .+++.+|.+|+||||+|+..++.++++.|++.+.++ +.+|.+|+|||
T Consensus 6 ~~L~~Aa~~G~--------~~~v~~Ll~~G--advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpL 74 (169)
T 4gpm_A 6 KRLIEAAENGN--------KDRVKDLIENG--ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPL 74 (169)
T ss_dssp HHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred HHHHHHHHcCC--------HHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHH
Confidence 47999999999 99999999998 789999999999999999999999999999998775 88999999999
Q ss_pred HHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 133 IQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 133 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|+|+.+|+.+++++|++.+.+.+. +|.+|+||||+|+..|+.++++.|++.+ .+.+.+|++|+||||+|+++.
T Consensus 75 h~A~~~g~~~~v~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 75 HHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcC
Confidence 999999999999999999999887 9999999999999999999999999987 889999999999999998864
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=218.36 Aligned_cols=162 Identities=19% Similarity=0.175 Sum_probs=148.6
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHH-----HcCCcccccCChHHHHHHHHhcCCch
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAI-----VELWVDVESDDATCLLDKLASKVDPQ 85 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~-----~~g~~~~~~~~~~~~v~~Ll~~~~p~ 85 (368)
..+..|.||||.|+..|+.++++.|++.++... ...|..|.||||+|+ ..++ .++++.|++.+ .
T Consensus 106 ~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~a~~~~~~~~~~--------~~~v~~Ll~~g--~ 174 (276)
T 4hbd_A 106 IADSNGNTALHYSVSHANFPVVQQLLDSGVCKV-DKQNRAGYSPIMLTALATLKTQDD--------IETVLQLFRLG--N 174 (276)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHGGGCCCCSHHH--------HHHHHHHHHHS--C
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-CCCCCCCCCHHHHHHHHHhhhhhh--------HHHHHHHHHcC--C
Confidence 346789999999999999999999999987444 556899999999999 5677 99999999998 7
Q ss_pred hhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHh-hCCCCccccCCCCch
Q 042244 86 TLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLRE-VTHGVDIYSGNDGAN 164 (368)
Q Consensus 86 ~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~-~~~~~~~~~~~~g~t 164 (368)
.....|..|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+.+|+.+++++|++ .+.+.+. +|.+|+|
T Consensus 175 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~-~d~~g~T 252 (276)
T 4hbd_A 175 INAKASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL-TDRDGST 252 (276)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC-CCTTSCC
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC-cCCCCCC
Confidence 77888999999999999999999999999998775 8899999999999999999999999999 7888776 9999999
Q ss_pred HHHHHHHhCchHHHHHHHHhC
Q 042244 165 MLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 165 ~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
|||+|+..|+.++++.|+++.
T Consensus 253 pL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 253 ALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999886
No 57
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=3e-27 Score=209.01 Aligned_cols=181 Identities=18% Similarity=0.120 Sum_probs=159.1
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhc
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDD 92 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~ 92 (368)
+..|.|+||.|++.|+.+.++.|++.+.+. ...+..|.||||+|+..|+ .++++.|++.+ +......+.
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~~-~~~~~~~~~ 74 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDV--RQPDKENVTLLHWAAINNR--------IDLVKYYISKG-AIVDQLGGD 74 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTT-CCTTCCBTT
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCc--CCCCCCCCCHHHHHHHhCC--------HHHHHHHHHcC-CcchhhcCC
Confidence 456889999999999999999999987654 4458899999999999999 99999999998 444445556
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHh
Q 042244 93 IGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDA 172 (368)
Q Consensus 93 ~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~ 172 (368)
.|.||||+|+..|+.+++++|++.+.+. +.+|..|.||||+|+..|+.+++++|++.+.+... .+.+|.||||.|+..
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM-MDQNGMTPLMWAAYR 152 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHH
T ss_pred cCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc-cCCCCCcHHHHHHHh
Confidence 6999999999999999999999998765 78899999999999999999999999999988876 899999999999977
Q ss_pred Cc-hHHHHHHHHhCCcccccCCC-CCCcHHHHHhcCC
Q 042244 173 TL-YDVALDLLKLYPTIGRDNID-SRRIVLNALAEKP 207 (368)
Q Consensus 173 ~~-~~~~~~Ll~~~~~~~~~~~~-~g~Tpl~l~~~~~ 207 (368)
++ .++++.|++.+ ...+..+. +|.||||+|++..
T Consensus 153 ~~~~~~~~~L~~~~-~~~~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 153 THSVDPTRLLLTFN-VSVNLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp CCSSTTHHHHHHTT-CCTTCCCTTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHHhcC-CCcchhhccCCCcHHHHHHHcC
Confidence 76 77888888776 77777776 8999999998754
No 58
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=6.4e-27 Score=218.68 Aligned_cols=151 Identities=20% Similarity=0.133 Sum_probs=123.1
Q ss_pred CCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCc--------hhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCC
Q 042244 48 IAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDP--------QTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPD 119 (368)
Q Consensus 48 ~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p--------~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~ 119 (368)
|..|.||||+|+..|+ .++++.|++.+.. ......+..|.||||+|+..|+.+++++|+++...
T Consensus 122 d~~g~t~l~~A~~~~~--------~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~ga 193 (337)
T 4g8k_A 122 DFYGFTAFMEAAVYGK--------VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA 193 (337)
T ss_dssp CTTCCBHHHHHHHTTC--------HHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCC
T ss_pred ccCCCCHHHHHHHcCc--------HHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Confidence 4445555555555555 8999999998721 11334566799999999999999999999986444
Q ss_pred CccccCCCCCcHHHHHHhhCC----HHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCC
Q 042244 120 LTNKRDTLDSLPVIQAAYHGH----KDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDS 195 (368)
Q Consensus 120 ~~~~~d~~G~tpLh~Aa~~g~----~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 195 (368)
.++.+|..|+||+|.++..++ .+++++|++.+.+.+. +|.+|+||||.|+..|+.++++.|++..+...+.+|.+
T Consensus 194 d~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~-~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~ 272 (337)
T 4g8k_A 194 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV-RGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD 272 (337)
T ss_dssp CTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC-CCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTT
T ss_pred CcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCC
Confidence 458999999999999887654 4688999999999886 99999999999999999999999998877899999999
Q ss_pred CCcHHHHHhcCC
Q 042244 196 RRIVLNALAEKP 207 (368)
Q Consensus 196 g~Tpl~l~~~~~ 207 (368)
|+||||+|++..
T Consensus 273 G~TpL~~A~~~g 284 (337)
T 4g8k_A 273 GKTALLLAVELK 284 (337)
T ss_dssp SCBHHHHHHHTT
T ss_pred CCCHHHHHHHcC
Confidence 999999998864
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=8.8e-28 Score=217.89 Aligned_cols=179 Identities=11% Similarity=0.060 Sum_probs=144.3
Q ss_pred hhccCChHHHHHHHh---CCHHHHHHHHHcCCcc------cc---cccCCCCCcHHHHHHHcCCcccccCChHHHHHHHH
Q 042244 12 EYCARYWPLYRMIEK---NDWRGVEDFVTNDPDA------LT---AKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLA 79 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~---G~~~~v~~Ll~~~p~~------~~---~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll 79 (368)
.+..|.||||.|+.. |+.++++.|++...+. ++ ...|..|.||||+|+..|+ .++++.|+
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~--------~~~v~~Ll 121 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRN--------MTLVTLLV 121 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTC--------HHHHHHHH
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCC--------HHHHHHHH
Confidence 367899999999987 9999999999974221 10 1236689999999999999 99999999
Q ss_pred hcCCchhhhchhc--------------CCCcHHHHHHHcCCHHHHHHHHh---hCCCCccccCCCCCcHHHHHHhhCC--
Q 042244 80 SKVDPQTLEQRDD--------------IGYTALYQCAVKGNLRALKVLVK---YNPDLTNKRDTLDSLPVIQAAYHGH-- 140 (368)
Q Consensus 80 ~~~~p~~~~~~d~--------------~G~tpLh~A~~~g~~~~v~~Ll~---~~~~~~~~~d~~G~tpLh~Aa~~g~-- 140 (368)
+.+ .+++.+|. .|.||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..|+
T Consensus 122 ~~g--a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~ 198 (273)
T 2pnn_A 122 ENG--ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNT 198 (273)
T ss_dssp HTT--CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSC
T ss_pred HCC--CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcc
Confidence 998 77788886 79999999999999999999999 66654 8899999999999999998
Q ss_pred -------HHHHHHHHhhCCCCcc------ccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHH
Q 042244 141 -------KDTFQYLREVTHGVDI------YSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLN 201 (368)
Q Consensus 141 -------~~~v~~Ll~~~~~~~~------~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~ 201 (368)
.+++++|++.+.+.+. .+|.+|+||||+|++.|+.++++.|++++..+.......+.+|-|
T Consensus 199 ~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 199 VDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred hhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 7999999999877641 389999999999999999999999999985577766666666543
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.5e-27 Score=202.64 Aligned_cols=150 Identities=17% Similarity=0.082 Sum_probs=140.2
Q ss_pred cccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccc
Q 042244 45 AKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKR 124 (368)
Q Consensus 45 ~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~ 124 (368)
...|..|+||||+|+..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++.+.+. +.+
T Consensus 29 n~~d~~g~t~L~~A~~~g~--------~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~ 97 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGM--------ENAIDKLVENF--DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTK 97 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTC--------GGGHHHHHHHH--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCC
T ss_pred hCcCCCCCCHHHHHHHcCC--------HHHHHHHHHhc--cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCC
Confidence 3448899999999999999 99999999998 678899999999999999999999999999998765 889
Q ss_pred CCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHh
Q 042244 125 DTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALA 204 (368)
Q Consensus 125 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~ 204 (368)
|..|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||.|+..|+.++++.|++.+ ...+.+|.+|.||+|+|+
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVND-RNLEGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEASAR 175 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999998886 9999999999999999999999999986 888999999999999998
Q ss_pred cCC
Q 042244 205 EKP 207 (368)
Q Consensus 205 ~~~ 207 (368)
+..
T Consensus 176 ~~~ 178 (192)
T 2rfm_A 176 IFG 178 (192)
T ss_dssp HTT
T ss_pred HhC
Confidence 764
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=4.6e-28 Score=217.54 Aligned_cols=162 Identities=14% Similarity=0.088 Sum_probs=143.6
Q ss_pred hhccCChHHHHHHHh---CCHHHHHHHHHcCCccc--c-------cccCCCCCcHHHHHHHcCCcccccCChHHHHHHHH
Q 042244 12 EYCARYWPLYRMIEK---NDWRGVEDFVTNDPDAL--T-------AKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLA 79 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~---G~~~~v~~Ll~~~p~~~--~-------~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll 79 (368)
.+..|.||||.|+.. |+.++++.|++.+.+.. . ...|..|.||||+|+..|+ .++++.|+
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~--------~~~v~~Ll 110 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRS--------LQCVKLLV 110 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTC--------HHHHHHHH
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCC--------HHHHHHHH
Confidence 567899999999999 99999999998743321 0 1124679999999999999 99999999
Q ss_pred hcCCchhhhchhcC-------------CCcHHHHHHHcCCHHHHHHHHh---hCCCCccccCCCCCcHHHHHHh--hCCH
Q 042244 80 SKVDPQTLEQRDDI-------------GYTALYQCAVKGNLRALKVLVK---YNPDLTNKRDTLDSLPVIQAAY--HGHK 141 (368)
Q Consensus 80 ~~~~p~~~~~~d~~-------------G~tpLh~A~~~g~~~~v~~Ll~---~~~~~~~~~d~~G~tpLh~Aa~--~g~~ 141 (368)
+.+ .+++.+|.. |.||||+|+..|+.+++++|++ .+.+. +.+|.+|+||||+|+. .++.
T Consensus 111 ~~g--a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 111 ENG--ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp HTT--CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCH
T ss_pred HcC--CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc-CccCCCCCCHHHHHHHcccCCc
Confidence 998 778888876 9999999999999999999999 66654 8999999999999999 7788
Q ss_pred H-------HHHHHHhhCCCC-------ccccCCCCchHHHHHHHhCchHHHHHHHHhC
Q 042244 142 D-------TFQYLREVTHGV-------DIYSGNDGANMLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 142 ~-------~v~~Ll~~~~~~-------~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
+ ++++|++.+.+. +. +|.+|+||||+|++.|+.++++.|++++
T Consensus 188 ~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~-~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 188 ENSALVIHMYDGLLQMGARLCPTVQLEEI-SNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCGGGC-CCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCcccccccccc-cCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 8 999999998887 55 9999999999999999999999999986
No 62
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=2e-27 Score=213.73 Aligned_cols=161 Identities=11% Similarity=0.069 Sum_probs=141.5
Q ss_pred ccCChHHHHHH---HhCCHHHHHHHHHcCCc---------ccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhc
Q 042244 14 CARYWPLYRMI---EKNDWRGVEDFVTNDPD---------ALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASK 81 (368)
Q Consensus 14 ~~g~t~Lh~A~---~~G~~~~v~~Ll~~~p~---------~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~ 81 (368)
..|.||||.|+ +.|+.++++.|++...+ ......|..|+||||+||..|+ .++++.|++.
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~--------~~~v~~Ll~~ 115 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRC--------KHYVELLVEK 115 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTC--------HHHHHHHHHT
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCC--------HHHHHHHHhC
Confidence 66999999999 78999999999997321 1112335589999999999999 9999999999
Q ss_pred CCchhhhchh--------------cCCCcHHHHHHHcCCHHHHHHHHh---hCCCCccccCCCCCcHHHHHHhhCC----
Q 042244 82 VDPQTLEQRD--------------DIGYTALYQCAVKGNLRALKVLVK---YNPDLTNKRDTLDSLPVIQAAYHGH---- 140 (368)
Q Consensus 82 ~~p~~~~~~d--------------~~G~tpLh~A~~~g~~~~v~~Ll~---~~~~~~~~~d~~G~tpLh~Aa~~g~---- 140 (368)
+ ..++.+| ..|+||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..++
T Consensus 116 g--a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~ 192 (260)
T 3jxi_A 116 G--ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL-RRQDSRGNTVLHALVAIADNTRE 192 (260)
T ss_dssp T--CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSSHH
T ss_pred C--CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC-cccCCCCCcHHHHHHHhccCchh
Confidence 8 7788888 589999999999999999999999 66654 8999999999999999887
Q ss_pred -----HHHHHHHHhhCCCC-------ccccCCCCchHHHHHHHhCchHHHHHHHHhCC
Q 042244 141 -----KDTFQYLREVTHGV-------DIYSGNDGANMLSRLIDATLYDVALDLLKLYP 186 (368)
Q Consensus 141 -----~~~v~~Ll~~~~~~-------~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~ 186 (368)
.+++++|++.+.+. .. +|.+|+||||+|++.|+.++++.|+++++
T Consensus 193 ~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 193 NTKFVTKMYDLLLIKCAKLFPDTNLEAL-LNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCGGGC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcccccccchhhc-ccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 69999999998876 43 89999999999999999999999999873
No 63
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=2.4e-26 Score=214.77 Aligned_cols=179 Identities=16% Similarity=0.149 Sum_probs=106.6
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD 91 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d 91 (368)
....|.|+||.|++.|+.++|+.||+.+.+.- ...+..|+||||+||..|+ .++|+.|++++ ..++.+|
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn-~~~~~~g~TpLh~A~~~g~--------~~iv~~Ll~~g--a~~~~~~ 89 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVN-FQEEEGGWTPLHNAVQMSR--------EDIVELLLRHG--ADPVLRK 89 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCC
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCCCCcCHHHHHHHcCC--------HHHHHHHHHcC--Cchhhhc
Confidence 34568899999999999999999999876553 3334569999999999999 99999999987 4455545
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCcc---------ccCCCC
Q 042244 92 DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDI---------YSGNDG 162 (368)
Q Consensus 92 ~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~---------~~~~~g 162 (368)
..+.+|+|.++..+..++.+.+++.+.++ +..|..|+||||+|+..|+.++++++++.+.+... ..+..|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g 168 (337)
T 4g8k_A 90 KNGATPFILAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 168 (337)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCS
T ss_pred cCCCchhHHHHhcccchhhHHhhhccchh-hhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCC
Confidence 44444444444444444444444444332 44444444444444444444444444444433221 123334
Q ss_pred chHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHH
Q 042244 163 ANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNA 202 (368)
Q Consensus 163 ~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l 202 (368)
.||||.|++.|+.++++.|+++.+.+.+.+|..|.||++.
T Consensus 169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~ 208 (337)
T 4g8k_A 169 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 208 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHH
Confidence 4444444444444444444443334444444444444443
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2.1e-26 Score=193.12 Aligned_cols=145 Identities=14% Similarity=0.114 Sum_probs=136.1
Q ss_pred CCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCC
Q 042244 50 PGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDS 129 (368)
Q Consensus 50 ~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 129 (368)
+|.||||.|+..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++.+.+. +.+|..|+
T Consensus 2 ~~~t~L~~A~~~g~--------~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 70 (167)
T 3v31_A 2 ANSLSVHQLAAQGE--------MLYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRE 70 (167)
T ss_dssp TTCCCHHHHHHTTC--------HHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCC
T ss_pred CCcchHHHHHHCCC--------HHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCC
Confidence 58999999999999 99999999998 678999999999999999999999999999998665 88899999
Q ss_pred cHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 130 LPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 130 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||.|+..|+.++++.|++.+ .+.+.+|.+|.||+|+|++..
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 71 SALSLACSKGYTDIVKMLLDCGVDVNE-YDWNGGTPLLYAVHGNHVKCVKMLLESG-ADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 999999999999999999999998886 9999999999999999999999999976 888899999999999998753
No 65
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.1e-27 Score=213.45 Aligned_cols=180 Identities=13% Similarity=0.004 Sum_probs=128.5
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhc
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDD 92 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~ 92 (368)
+..|.||||.|++.|+.+.++.|++.+.+.. .+..|.||||.|+..|+ .++++.|++.+ .+++.+|.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~---~~~~~~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~~d~ 68 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVK---FNPLPLALLLDSSLEGE--------FDLVQRIIYEV--DDPSLPND 68 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTC--------HHHHHHHTSTT--SSCCCCCT
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcc---cCchhhHHHHHHHHcCC--------HHHHHHHHHcC--CCCCCcCC
Confidence 3568999999999999999999999865542 35788999999999999 99999999998 68899999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCc-hHHHHH--
Q 042244 93 IGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGA-NMLSRL-- 169 (368)
Q Consensus 93 ~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~a-- 169 (368)
.|+||||+|+..|+.+++++|++++.++ +.+|.+|+||||+|+.+|+.+++++|++++.+.+. ++.+|. ||||+|
T Consensus 69 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~~~~t~l~~a~~ 146 (239)
T 1ycs_B 69 EGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA-MTYSDMQTAADKCEE 146 (239)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCSSSCCCHHHHCCS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce-ecCCCCcchHHHHHH
Confidence 9999999999999999999999998775 89999999999999999999999999999999886 776666 999999
Q ss_pred HHhCchHHHHHHHHhCCcccccC---------CCCCCcHHHHHhcCCC
Q 042244 170 IDATLYDVALDLLKLYPTIGRDN---------IDSRRIVLNALAEKPY 208 (368)
Q Consensus 170 ~~~~~~~~~~~Ll~~~~~~~~~~---------~~~g~Tpl~l~~~~~~ 208 (368)
+..|+.++++.|++.+ ...+.. +..+.++.+++.++.+
T Consensus 147 ~~~g~~~~~~~Ll~~~-a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 147 MEEGYTQCSQFLYGVQ-EKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp SSTTCCCHHHHHHHHH-HHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhhccHHHHHHHHHhh-hcccccccceEEEEeccCCCCCCcccccCCC
Confidence 7889999999999876 443333 6668888887766543
No 66
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=8.7e-29 Score=219.27 Aligned_cols=181 Identities=13% Similarity=0.016 Sum_probs=156.3
Q ss_pred chhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhh
Q 042244 9 EEDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLE 88 (368)
Q Consensus 9 ~~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~ 88 (368)
.+..+..+.||||.|+..|+.++++.|++.+.+. ...|..|+||||+||..|+ .++++.|++.+ .+++
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~d~~g~tpLh~A~~~g~--------~~~v~~Ll~~g--a~~n 81 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP--SQPNEEGITALHNAICGAN--------YSIVDFLITAG--ANVN 81 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTT--CCTT
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC--CCCCCCCCCHHHHHHHcCC--------HHHHHHHHHCC--CCCC
Confidence 3455677889999999999999999999986654 3458899999999999999 99999999998 7889
Q ss_pred chhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccC-CCCCcHHHHH--HhhCCHHHHHHHHhhCCCCccccCCCCchH
Q 042244 89 QRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRD-TLDSLPVIQA--AYHGHKDTFQYLREVTHGVDIYSGNDGANM 165 (368)
Q Consensus 89 ~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~A--a~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 165 (368)
.+|..|+||||+|+..|+.+++++|++.+.+. +.+| .+|+||||+| +..|+.+++++|++.+.+.+. +|..|.|+
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~-~~~~~~~~ 159 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL-MNSGAVYA 159 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT-SGGGEEEE
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc-ccCCchHH
Confidence 99999999999999999999999999998876 5554 6999999999 999999999999999988876 88899999
Q ss_pred HHHHHHhCchHHHHHHHHhCCcc--cccCCCCCCcHHHHHhcCC
Q 042244 166 LSRLIDATLYDVALDLLKLYPTI--GRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 166 Lh~a~~~~~~~~~~~Ll~~~~~~--~~~~~~~g~Tpl~l~~~~~ 207 (368)
++.+...+.. +.|++.+ .. .+.+|.+|+||||+|+++.
T Consensus 160 l~~~~~~~~~---~~ll~~g-a~~~~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 160 LWDYSAEFGD---ELSFREG-ESVTVLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp SSCBCCSSTT---BCCBCTT-CEEEEEESSCTTCSSEEEEEETT
T ss_pred HHHHhhcccc---ccCcccc-ccccccccCCCcccHHHHHHHcC
Confidence 9865544433 3455554 44 6788999999999998864
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=4.9e-26 Score=191.85 Aligned_cols=145 Identities=16% Similarity=0.122 Sum_probs=134.9
Q ss_pred CCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCc
Q 042244 51 GSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSL 130 (368)
Q Consensus 51 g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t 130 (368)
+.||||.|+..|+ .++++.|++.+ +..++.+|..|+||||+|+..|+.+++++|++++.+. +.+|.+|+|
T Consensus 2 ~~~~L~~A~~~g~--------~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 71 (172)
T 3v30_A 2 DSLSIHQLAAQGE--------LDQLKEHLRKG-DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERES 71 (172)
T ss_dssp --CCHHHHHHTTC--------HHHHHHHHTTC-SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCC
T ss_pred chhhHHHHHHcCC--------HHHHHHHHHcC-cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCC
Confidence 5789999999999 99999999998 6668999999999999999999999999999998765 889999999
Q ss_pred HHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 131 PVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 131 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|+..++.++++.|++.+ ...+.+|.+|+||+|+|++..
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~ 146 (172)
T 3v30_A 72 ALSLASTGGYTDIVGLLLERDVDINI-YDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAVALG 146 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHhC
Confidence 99999999999999999999998886 8999999999999999999999999986 888999999999999998764
No 68
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.5e-26 Score=193.60 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=136.8
Q ss_pred cCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC
Q 042244 47 TIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT 126 (368)
Q Consensus 47 ~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 126 (368)
.|.+|.||||.|+..|+ .++++.|++.. +...+..|..|+||||+|+..|+.+++++|++++.+. +.+|.
T Consensus 4 ~~~~~~~~l~~A~~~g~--------~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~ 73 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGD--------VETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDK 73 (165)
T ss_dssp --CHHHHHHHHHHHHTC--------HHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT
T ss_pred CcchhhHHHHHHHHhCC--------HHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCC
Confidence 37789999999999999 99999999987 6778888999999999999999999999999998765 88999
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 127 LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 127 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
+|+||||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|+..|+.++++.|++.+ .+.+.+|.+|+||+|+|.+.
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~~ 151 (165)
T 3twr_A 74 GGLVPLHNACSYGHYEVAELLVKHGAVVNV-ADLWKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVKDG 151 (165)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSCTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHhcC
Confidence 999999999999999999999999998886 9999999999999999999999999986 88999999999999997653
No 69
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=1.3e-26 Score=212.06 Aligned_cols=163 Identities=13% Similarity=0.064 Sum_probs=148.6
Q ss_pred cCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCC
Q 042244 15 ARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIG 94 (368)
Q Consensus 15 ~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G 94 (368)
+|.||||.|+..|+.++++.|++.+.+. ...|..|+||||+|+..|+ .++++.|++.+ ..++.+|..|
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--a~~~~~~~~g 128 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDD--SQFDDKGNTALYYAVDSGN--------MQTVKLFVKKN--WRLMFYGKTG 128 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHHHHC--GGGGGCSSSG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCcHHHHHHHcCC--------HHHHHHHHhcC--CCCCccCCCC
Confidence 4899999999999999999999987664 3458899999999999999 99999999998 7889999999
Q ss_pred -CcHHHHHHHcCCHHHHHHHHhhCCCCccccCC-CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchH-HHHHHH
Q 042244 95 -YTALYQCAVKGNLRALKVLVKYNPDLTNKRDT-LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANM-LSRLID 171 (368)
Q Consensus 95 -~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~-~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~-Lh~a~~ 171 (368)
.||||+|+..|+.+++++|++++++. .|. .|+||||+|+.+|+.+++++|++++.+.+. +|.+|+|| ||+|+.
T Consensus 129 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~-~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 129 WKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNT-NNSLLFIPDIKLAID 204 (285)
T ss_dssp GGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCT-TCCCBCCTTHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCCccHHHHHHHcChHHHHHHHHHcCCCCCc-ccCCCCChHHHHHHH
Confidence 79999999999999999999998765 333 899999999999999999999999988886 99999998 999999
Q ss_pred hCchHHHHHHHHhCCcccccCCC
Q 042244 172 ATLYDVALDLLKLYPTIGRDNID 194 (368)
Q Consensus 172 ~~~~~~~~~Ll~~~~~~~~~~~~ 194 (368)
.++.++++.|++.+ .+.+.+|.
T Consensus 205 ~~~~~~v~~Ll~~g-ad~~~~~~ 226 (285)
T 3kea_A 205 NKDIEMLQALFKYD-INIYSANL 226 (285)
T ss_dssp HTCHHHHHHHTTSC-BCSTTTTG
T ss_pred cCCHHHHHHHHHcC-CCCCCCCh
Confidence 99999999999886 77776664
No 70
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=4.3e-27 Score=201.61 Aligned_cols=162 Identities=8% Similarity=-0.020 Sum_probs=140.9
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhc
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDD 92 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~ 92 (368)
..+++++||.|++.|+.+.++.+++.+++.. .+..|+||||+|+..|+. +++.++++.|++.+ .+++.+|.
T Consensus 3 ~~~~~~~l~~Aa~~g~~~~~~~l~~~~~~~~---~~~~g~T~Lh~A~~~~~~----~~~~~iv~~Ll~~G--advn~~d~ 73 (186)
T 3t8k_A 3 AMSEYRTVSAAAMLGTYEDFLELFEKGYEDK---ESVLKSNILYDVLRNNND----EARYKISMFLINKG--ADIKSRTK 73 (186)
T ss_dssp HHHHCSSHHHHHHHSCHHHHHHHHHHSSSCH---HHHHTTTHHHHHTTCSCH----HHHHHHHHHHHHTT--CCSSCCCT
T ss_pred ccccccHHHHHHHcCCHHHHHHHHhcCcccc---cccCCCCHHHHHHHcCCc----chHHHHHHHHHHCC--CCCCCCCC
Confidence 3457899999999999999999999886643 136799999999999981 00135999999998 88999999
Q ss_pred CCCcHHHHHHHcCC------HHHHHHHHhhCCCCccccCCCCC-cHHHHHHhhC-----CHHHHHHHHh-hCCCCccccC
Q 042244 93 IGYTALYQCAVKGN------LRALKVLVKYNPDLTNKRDTLDS-LPVIQAAYHG-----HKDTFQYLRE-VTHGVDIYSG 159 (368)
Q Consensus 93 ~G~tpLh~A~~~g~------~~~v~~Ll~~~~~~~~~~d~~G~-tpLh~Aa~~g-----~~~~v~~Ll~-~~~~~~~~~~ 159 (368)
+|+||||+|+..|+ .+++++|++++.++ +.+|.+|+ ||||+|+..+ +.+++++|++ .+.+.+. +|
T Consensus 74 ~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~-~d 151 (186)
T 3t8k_A 74 EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI-KD 151 (186)
T ss_dssp TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC-CC
T ss_pred CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc-cC
Confidence 99999999999987 68899999999776 99999999 9999999954 4569999999 8999887 99
Q ss_pred CCCchHHHHHHHhCchHHHHHHHHhC
Q 042244 160 NDGANMLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 160 ~~g~t~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
.+|+||||+|++.++.++++.|....
T Consensus 152 ~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 152 KWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp TTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 99999999999999999999888654
No 71
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=4.9e-26 Score=189.69 Aligned_cols=146 Identities=19% Similarity=0.100 Sum_probs=134.9
Q ss_pred CCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCC
Q 042244 49 APGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLD 128 (368)
Q Consensus 49 ~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G 128 (368)
+...||||.|+..|+ .++++.|++.+ ..++.+|..|+||||+|+. |+.+++++|++.+.+. +.+|..|
T Consensus 3 ~~~~~~L~~A~~~g~--------~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g 70 (162)
T 1ihb_A 3 EPWGNELASAAARGD--------LEQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTG 70 (162)
T ss_dssp --CHHHHHHHHHHTC--------HHHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred chHhhHHHHHHHcCC--------HHHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCC
Confidence 456899999999999 99999999987 6788999999999999999 9999999999998765 8899999
Q ss_pred CcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 129 SLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 129 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||.|+..|+.+++++|++.+....+.+|.+|+||+|+|++..
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence 9999999999999999999999988876 99999999999999999999999999986667899999999999998864
No 72
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=9.3e-26 Score=189.82 Aligned_cols=148 Identities=18% Similarity=0.141 Sum_probs=136.5
Q ss_pred cCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC
Q 042244 47 TIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT 126 (368)
Q Consensus 47 ~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 126 (368)
....+.+|||.||..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++++.+. +.+|.
T Consensus 10 ~~~~~~~~l~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~ 78 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGR--------DDEVRILMANG--ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDH 78 (169)
T ss_dssp ---CHHHHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT
T ss_pred CCCcccchHHHHHHcCC--------HHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC
Confidence 35667899999999999 99999999998 778899999999999999999999999999998765 88999
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 127 LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 127 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
+|+||||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|+..++.+++++|++.+ .+.+.+|.+|.||+|+|+++
T Consensus 79 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 79 AGMTPLRLAALFGHLEIVEVLLKNGADVNA-NDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISIDN 156 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHh
Confidence 999999999999999999999999998876 8999999999999999999999999986 78889999999999999876
Q ss_pred C
Q 042244 207 P 207 (368)
Q Consensus 207 ~ 207 (368)
.
T Consensus 157 ~ 157 (169)
T 2y1l_E 157 G 157 (169)
T ss_dssp T
T ss_pred C
Confidence 4
No 73
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.1e-25 Score=186.21 Aligned_cols=143 Identities=15% Similarity=0.104 Sum_probs=131.9
Q ss_pred CCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCc
Q 042244 51 GSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSL 130 (368)
Q Consensus 51 g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t 130 (368)
..||||.|+..|+ .++++.|++.+ ...+ .|..|.||||+|+..|+.+++++|++.+.+. +.+|..|+|
T Consensus 2 ~~~~L~~A~~~g~--------~~~v~~Ll~~g--~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 69 (153)
T 1awc_B 2 LGKKLLEAARAGQ--------DDEVRILMANG--APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRT 69 (153)
T ss_dssp HHHHHHHHHHHTC--------HHHHHHHHHHT--CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCC
T ss_pred ccHHHHHHHHcCC--------HHHHHHHHHcC--CCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCC
Confidence 4689999999999 99999999998 3333 6889999999999999999999999998765 889999999
Q ss_pred HHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 131 PVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 131 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|+..|+.+++++|++.+ ...+.+|.+|+||+|+|+++.
T Consensus 70 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~ 144 (153)
T 1awc_B 70 PLHMAASEGHANIVEVLLKHGADVNA-KDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDNG 144 (153)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcC
Confidence 99999999999999999999988886 9999999999999999999999999986 888999999999999998864
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=9.1e-26 Score=191.63 Aligned_cols=147 Identities=19% Similarity=0.143 Sum_probs=134.0
Q ss_pred CCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCC
Q 042244 48 IAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTL 127 (368)
Q Consensus 48 ~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 127 (368)
++++.+|||.||..|+ .++++.|++.+ +..++.+|..|+||||+|+..|+.+++++|++.+.+. +.+|.+
T Consensus 2 ~~~~~~~l~~A~~~g~--------~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 71 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGN--------AVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRG 71 (179)
T ss_dssp -----CCHHHHHHHTC--------HHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred CHHHHHHHHHHHHcCC--------HHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCC
Confidence 3468899999999999 99999999997 6778999999999999999999999999999998765 889999
Q ss_pred CCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 128 DSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 128 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
|+||||+|+..|+.+++++|++.+.+.+. +|.+|+||||.|+..++.++++.|++.+ .+.+.+|.+|+||+|+|.+.
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 72 DDTPLHLAASHGHRDIVQKLLQYKADINA-VNEHGNVPLHYACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSSBCCTTSCCGGGGSCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcchhccCCCCcHHHHHHH
Confidence 99999999999999999999999998886 9999999999999999999999999986 88999999999999988653
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.5e-25 Score=185.65 Aligned_cols=143 Identities=19% Similarity=0.081 Sum_probs=133.6
Q ss_pred CCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCc
Q 042244 51 GSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSL 130 (368)
Q Consensus 51 g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t 130 (368)
|.||||.|+..|+ .++++.|++.. +..++.+|..|+||||+ +..|+.+++++|++.+.+. +.+|..|+|
T Consensus 2 ~~~~L~~A~~~g~--------~~~v~~ll~~~-~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 70 (156)
T 1bd8_A 2 AGDRLSGAAARGD--------VQEVRRLLHRE-LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTS 70 (156)
T ss_dssp HHHHHHHHHHHTC--------HHHHHHHHHTT-CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred cchHHHHHHHhCC--------HHHHHHHHHhh-CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCC
Confidence 5799999999999 99999999994 67789999999999999 9999999999999998765 889999999
Q ss_pred HHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 131 PVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 131 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|||+|+.+|+.+++++|++.+.+.+. +|.+|+||||.|+..|+.+++++|++. ...+.+|.+|.||+|+|++..
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 71 PVHDAARTGFLDTLKVLVEHGADVNV-PDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRG 144 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSC
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcC
Confidence 99999999999999999999988876 899999999999999999999999987 788889999999999998764
No 76
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.92 E-value=8.4e-25 Score=200.42 Aligned_cols=174 Identities=18% Similarity=0.108 Sum_probs=148.9
Q ss_pred HHHHhCCHHHHHHHHHcCCccc-------ccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCC
Q 042244 22 RMIEKNDWRGVEDFVTNDPDAL-------TAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIG 94 (368)
Q Consensus 22 ~A~~~G~~~~v~~Ll~~~p~~~-------~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G 94 (368)
.+++.|+.+.++.++...++.. ....+.+|.||||.||..|+ .++++.|++.+ ..++.+|.+|
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~~~g 73 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGD--------TEEVLRLLERG--ADINYANVDG 73 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTC--------HHHHHHHHHHC--CCTTCBCTTC
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCC--------HHHHHHHHHcC--CCCcccCCCC
Confidence 4788888999999998744321 12224468899999999999 99999999998 6789999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCcc------------------
Q 042244 95 YTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDI------------------ 156 (368)
Q Consensus 95 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~------------------ 156 (368)
.||||+|+..|+.+++++|++++.++ +.+|..|+||||+|+..|+.+++++|++.+.+...
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 152 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAME 152 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchH
Confidence 99999999999999999999998765 88999999999999999999999999999876543
Q ss_pred -----------------------------------------ccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCC
Q 042244 157 -----------------------------------------YSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDS 195 (368)
Q Consensus 157 -----------------------------------------~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 195 (368)
..+.+|.||||.|+..|+.++++.|++.+ .+.+.+|.+
T Consensus 153 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~ 231 (299)
T 1s70_B 153 ELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYD 231 (299)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTT
T ss_pred HHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCC
Confidence 02356788899999999999999999876 888889999
Q ss_pred CCcHHHHHhcCC
Q 042244 196 RRIVLNALAEKP 207 (368)
Q Consensus 196 g~Tpl~l~~~~~ 207 (368)
|+||||+|++..
T Consensus 232 g~tpL~~A~~~~ 243 (299)
T 1s70_B 232 GWTPLHAAAHWG 243 (299)
T ss_dssp CCCHHHHHHHTT
T ss_pred CCcHHHHHHhcC
Confidence 999999998864
No 77
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=1.5e-25 Score=186.12 Aligned_cols=143 Identities=17% Similarity=0.087 Sum_probs=117.3
Q ss_pred cCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC
Q 042244 47 TIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT 126 (368)
Q Consensus 47 ~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 126 (368)
.+..|.||||+|+..|+ .++++.|++.+ ..++.+|..|+||||+|+ .|+.+++++|++++.++ +.+|.
T Consensus 8 ~~~~~~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~ 75 (156)
T 1bi7_B 8 SMEPSADWLATAAARGR--------VEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADP 75 (156)
T ss_dssp --CCSTTHHHHHHHHTC--------HHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCT
T ss_pred CCccchHHHHHHHHcCC--------HHHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCC
Confidence 37789999999999999 99999999998 778999999999999985 89999999999998765 88999
Q ss_pred CCCc-HHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHH
Q 042244 127 LDSL-PVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNAL 203 (368)
Q Consensus 127 ~G~t-pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~ 203 (368)
.|+| |||+|+.+|+.+++++|++.+.+.+. +|.+|+||||+|+..|+.+++++|++.+ ...+.+|..|.||.+-.
T Consensus 76 ~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDV-RDAWGRLPVDLAEELGHRDVARYLRAAA-GGTRGSNHARIDAAEGP 151 (156)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHhCHHHHHHHHHHcC-CCCCccCcCcCcccccC
Confidence 9999 99999999999999999999998886 9999999999999999999999999886 88999999999998743
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=2.6e-25 Score=184.65 Aligned_cols=143 Identities=20% Similarity=0.146 Sum_probs=115.3
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR 90 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~ 90 (368)
..+..|.||||.|++.|+.++++.|++.+.+. ...|..|+||||+|+ .|+ .++++.|++.+ ..++.+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~-~~~--------~~~v~~Ll~~g--~~~~~~ 73 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANP--NAPNSYGRRPIQVMM-MGS--------ARVAELLLLHG--AEPNCA 73 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCT--TCCCSSSCCTTTSSC-TTC--------HHHHHHHHTTT--CCCCCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHH-cCC--------HHHHHHHHHcC--CCCCCc
Confidence 45677999999999999999999999986554 445889999999985 899 99999999998 778999
Q ss_pred hcCCCc-HHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHH
Q 042244 91 DDIGYT-ALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSR 168 (368)
Q Consensus 91 d~~G~t-pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 168 (368)
|..|+| |||+|+..|+.+++++|++++.++ +.+|.+|+||||+|+.+|+.+++++|++++.+... +|..|.|+.+.
T Consensus 74 d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~~~~ 150 (156)
T 1bi7_B 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG-SNHARIDAAEG 150 (156)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc-cCcCcCccccc
Confidence 999999 999999999999999999998765 88999999999999999999999999999999886 89999998764
No 79
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=8.1e-25 Score=177.37 Aligned_cols=125 Identities=16% Similarity=0.089 Sum_probs=80.1
Q ss_pred CCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCC
Q 042244 48 IAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTL 127 (368)
Q Consensus 48 ~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 127 (368)
|..|.||||+|+..|+ .++++.|++.+ ..++.+|..|+||||+|+. |+.+++++|++++.+. +.+|..
T Consensus 9 ~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~ 76 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQ--------VETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPA 76 (136)
T ss_dssp CCCCSCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTT
T ss_pred CCCCccHHHHHHHcCC--------HHHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCC
Confidence 5566666666666666 66666666665 4556666666666666666 6666666666665543 556666
Q ss_pred -CCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhC
Q 042244 128 -DSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 128 -G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
|+||||+|+.+|+.+++++|++.+.+... +|.+|+||||+|+..++.+++++|++.+
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDV-CDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCC-CSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 66666666666666666666666665554 6666666666666666666666666554
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=1.4e-24 Score=175.90 Aligned_cols=119 Identities=11% Similarity=0.058 Sum_probs=102.3
Q ss_pred hhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCC-Cc
Q 042244 85 QTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGND-GA 163 (368)
Q Consensus 85 ~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~-g~ 163 (368)
..++.+|..|.||||+|+..|+.+++++|++++.+. +.+|..|+||||+|+. |+.+++++|++.+.+.+. +|.+ |+
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~~g~ 79 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC-ADPATLT 79 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC-CBTTTTB
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC-cCCCCCC
Confidence 356778888999999999999999999999887654 7888899999999999 999999999998888776 7888 89
Q ss_pred hHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 164 NMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 164 t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
||||+|+..|+.++++.|++.+ ...+.+|.+|+||+|+|+++.
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~ 122 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQG 122 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC
Confidence 9999999999999999998876 778888889999999987653
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=4.4e-24 Score=173.01 Aligned_cols=125 Identities=19% Similarity=0.198 Sum_probs=72.5
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhc
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDD 92 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~ 92 (368)
...+.||||.|++.|+.++++.|++.+.+. ...|..|.||||+|+..|+ .++++.|++.+ .+++.+|.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~d~ 78 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV--NAKDEYGLTPLYLATAHGH--------LEIVEVLLKNG--ADVNAVDA 78 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCT
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCcCCC
Confidence 344556666666666666666666654433 2335556666666666666 66666666655 44555566
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhh
Q 042244 93 IGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREV 150 (368)
Q Consensus 93 ~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~ 150 (368)
.|+||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+.+|+.+++++|++.
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 6666666666666666666666655443 55555666666666666666666666554
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=4.4e-25 Score=195.35 Aligned_cols=161 Identities=14% Similarity=0.079 Sum_probs=137.8
Q ss_pred HHHHHc--CCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHH
Q 042244 33 EDFVTN--DPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRAL 110 (368)
Q Consensus 33 ~~Ll~~--~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v 110 (368)
+.|++. +|+.. ...+.+|.||||.|+..|+ .++++.|++.+ .+++.+|..|+||||+|+..|+.+++
T Consensus 2 ~~ll~~~~~~~~~-~~~~~~~~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~~d~~g~tpLh~A~~~g~~~~v 70 (229)
T 2vge_A 2 RSVLRKAGSPRKA-RRARLNPLVLLLDAALTGE--------LEVVQQAVKEM--NDPSQPNEEGITALHNAICGANYSIV 70 (229)
T ss_dssp --------CCCCC-CCTTSCHHHHHHHHHHHTC--------HHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred eehhccCCCCccc-cccccchhHHHHHHHHcCC--------HHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 456665 34444 4457788899999999999 99999999998 67899999999999999999999999
Q ss_pred HHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHH--HHhCchHHHHHHHHhCCcc
Q 042244 111 KVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRL--IDATLYDVALDLLKLYPTI 188 (368)
Q Consensus 111 ~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a--~~~~~~~~~~~Ll~~~~~~ 188 (368)
++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++.+.+.....+.+|+||||+| +..++.+++++|++.+ ..
T Consensus 71 ~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~ 148 (229)
T 2vge_A 71 DFLITAGANV-NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE-QS 148 (229)
T ss_dssp HHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-HH
T ss_pred HHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-CC
Confidence 9999998765 889999999999999999999999999999988762347999999999 9999999999999987 78
Q ss_pred cccCCCCCCcHHHHHhcC
Q 042244 189 GRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 189 ~~~~~~~g~Tpl~l~~~~ 206 (368)
.+.+|..|.||++.++..
T Consensus 149 ~~~~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 149 MGLMNSGAVYALWDYSAE 166 (229)
T ss_dssp TTTSGGGEEEESSCBCCS
T ss_pred cccccCCchHHHHHHhhc
Confidence 888899999998854443
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.4e-23 Score=166.76 Aligned_cols=125 Identities=21% Similarity=0.222 Sum_probs=86.0
Q ss_pred cCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCC
Q 042244 15 ARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIG 94 (368)
Q Consensus 15 ~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G 94 (368)
+|.||||.|++.|+.++++.|++.+++. ...|..|.||||+|+..|+ .++++.|++.+ ..++.+|..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~~~~--------~~~~~~Ll~~g--~~~~~~~~~g 68 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAARNGH--------LEVVKLLLEAG--ADVNAKDKNG 68 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT--TCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTTS
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC--CCcCCCCCcHHHHHHHcCc--------HHHHHHHHHcC--CCCcccCCCC
Confidence 3667777777777777777777765443 2336667777777777777 77777777766 5566667777
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCC
Q 042244 95 YTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTH 152 (368)
Q Consensus 95 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 152 (368)
+||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+..|+.+++++|+++++
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 69 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CcHHHHHHHcChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 77777777777777777777766553 5666677777777777777777777776654
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=5e-24 Score=172.69 Aligned_cols=127 Identities=23% Similarity=0.240 Sum_probs=117.2
Q ss_pred cCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC
Q 042244 47 TIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT 126 (368)
Q Consensus 47 ~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 126 (368)
....|.||||+||..|+ .++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+.+. +.+|.
T Consensus 10 ~~~~~~t~l~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~ 78 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQ--------DDEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDA 78 (136)
T ss_dssp --CHHHHHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT
T ss_pred ccccccHHHHHHHHhCC--------HHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCC
Confidence 35678999999999999 99999999998 778999999999999999999999999999998765 88999
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhC
Q 042244 127 LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 127 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
+|+||||+|+.+|+.+++++|++.+.+... +|.+|+||||+|+..++.++++.|++.+
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADVNA-QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcC-cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999988876 9999999999999999999999998753
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=3e-23 Score=164.78 Aligned_cols=124 Identities=23% Similarity=0.252 Sum_probs=117.2
Q ss_pred CCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCC
Q 042244 50 PGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDS 129 (368)
Q Consensus 50 ~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 129 (368)
+|+||||+|+..|+ .++++.|++.+ ..++.+|..|.||||+|+..|+.+++++|++.+.+. +.+|..|+
T Consensus 1 ~g~t~L~~A~~~~~--------~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~ 69 (126)
T 1n0r_A 1 NGRTPLHLAARNGH--------LEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGR 69 (126)
T ss_dssp CCCCHHHHHHHHTC--------HHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred CCccHHHHHHHcCc--------HHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCC
Confidence 58999999999999 99999999998 668889999999999999999999999999998765 88999999
Q ss_pred cHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhC
Q 042244 130 LPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 130 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
||||+|+..|+.+++++|++.+.+... +|.+|+||||.|+..++.+++++|++.+
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999999999999988876 8999999999999999999999999886
No 86
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.90 E-value=2.4e-24 Score=200.82 Aligned_cols=169 Identities=10% Similarity=0.026 Sum_probs=132.2
Q ss_pred hHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcH
Q 042244 18 WPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTA 97 (368)
Q Consensus 18 t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tp 97 (368)
+.+|.|+..+..++++.|++...+.- ...|.+|+||||+||..|+ .++++.|++++ .+++.+|.+|+||
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn-~~~d~~g~TpLh~Aa~~g~--------~~~v~~Ll~~G--ad~n~~d~~g~Tp 167 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLN-IPVDEHGNTPLHWLTSIAN--------LELVKHLVKHG--SNRLYGDNMGESC 167 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSC-SCCSTTCCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTBCCTTCCCH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcc-cccCCCCCcHHHHHHHcCC--------HHHHHHHHHcC--CCCCCcCCCCCCH
Confidence 34577787777788888877654442 3258999999999999999 99999999998 8899999999999
Q ss_pred HHHHHHcCC---HHHHHHHHhhCCCCccccCCCCCcHHHHHHh----hCCHHHHHHHHhh--------------------
Q 042244 98 LYQCAVKGN---LRALKVLVKYNPDLTNKRDTLDSLPVIQAAY----HGHKDTFQYLREV-------------------- 150 (368)
Q Consensus 98 Lh~A~~~g~---~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~----~g~~~~v~~Ll~~-------------------- 150 (368)
||+|+..|+ .++++.|++.+...++.+|.+|+||||+|+. .|+.+++++|++.
T Consensus 168 Lh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~ 247 (327)
T 1sw6_A 168 LVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEK 247 (327)
T ss_dssp HHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----
T ss_pred HHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcc
Confidence 999999998 6788888887655568999999999999999 8999999999987
Q ss_pred CCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 151 THGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 151 ~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
+.+.+. +|.+|.||||.|+. ++.|++. ..+.+|.+|+||||+|++..
T Consensus 248 g~~~~~-~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g 294 (327)
T 1sw6_A 248 ESKPND-KNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLG 294 (327)
T ss_dssp -------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHC
T ss_pred cCCccc-ccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcC
Confidence 555555 89999999999885 7788877 48889999999999998864
No 87
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=1.5e-23 Score=186.48 Aligned_cols=142 Identities=11% Similarity=0.048 Sum_probs=100.4
Q ss_pred CCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCC
Q 042244 48 IAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTL 127 (368)
Q Consensus 48 ~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 127 (368)
+..|.||||.|+..|+ .+.++.|++++ ..++. +..|.||||.|+..|+.++++.|++.+.+. +.+|.+
T Consensus 2 ~~~g~t~L~~a~~~~~--------~~~~~~ll~~g--~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~ 69 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNL--------RKTGSERIAHG--MRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDE 69 (239)
T ss_dssp ----------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTT
T ss_pred CccccccCchhhhhhh--------HHHHHHHhccC--CCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 3469999999999999 99999999998 55654 467899999999999999999999998754 889999
Q ss_pred CCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCC-cHHHHH
Q 042244 128 DSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRR-IVLNAL 203 (368)
Q Consensus 128 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-Tpl~l~ 203 (368)
|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||.|+..|+.++++.|++.+ .+.+.+|.+|. ||+|++
T Consensus 70 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 70 GITALHNAVCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHH
Confidence 99999999999999999999999998886 9999999999999999999999999987 77888887776 999988
No 88
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=2.8e-23 Score=177.04 Aligned_cols=142 Identities=18% Similarity=0.066 Sum_probs=124.6
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR 90 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~ 90 (368)
+.+..|.||||.|++.|+.+.++.|++ +.+. ...|..|+||||+|+..|+ .++++.|++.+ ..++.+
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~--~~~d~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--a~~~~~ 105 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DRDV--DAVDENGRTALLFVAGLGS--------DKCVRLLAEAG--ADLDHR 105 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT--TCCCTTSCCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC--CCcCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCcC
Confidence 446789999999999999999999998 4333 4458899999999999999 99999999998 778888
Q ss_pred h-cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHH
Q 042244 91 D-DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRL 169 (368)
Q Consensus 91 d-~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a 169 (368)
| ..|+||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|++.++ ...+.++|+.+
T Consensus 106 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a 166 (183)
T 3deo_A 106 DMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------------TTPKGNPMQFG 166 (183)
T ss_dssp CSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHH
T ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhcc------------------CcccccHHHHH
Confidence 8 88999999999999999999999998765 8899999999999997542 24568999999
Q ss_pred HHhCchHHHHHHHHh
Q 042244 170 IDATLYDVALDLLKL 184 (368)
Q Consensus 170 ~~~~~~~~~~~Ll~~ 184 (368)
+..|+.++++.|.++
T Consensus 167 ~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 167 RRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHcCHHHHHHHHHHh
Confidence 999999999988654
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=5.8e-23 Score=183.42 Aligned_cols=143 Identities=18% Similarity=0.065 Sum_probs=126.7
Q ss_pred hhhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc
Q 042244 10 EDEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ 89 (368)
Q Consensus 10 ~~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~ 89 (368)
.+.+..|.||||.|++.|+.++++.|++ ..+. ...|..|+||||+||..|+ .++++.|++.+ ..++.
T Consensus 39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~--~~~d~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--a~~~~ 105 (244)
T 3ui2_A 39 ADVVSEYETPWWTAARKADEQALSQLLE-DRDV--DAVDENGRTALLFVAGLGS--------DKCVRLLAEAG--ADLDH 105 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT--TCBCTTSCBHHHHHHHHTC--------HHHHHHHHHTT--CCTTC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHc-CCCC--CCcCCCCCCHHHHHHHCCC--------HHHHHHHHHcC--CCCCc
Confidence 3456689999999999999999999998 4333 4458899999999999999 99999999998 77888
Q ss_pred hh-cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHH
Q 042244 90 RD-DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSR 168 (368)
Q Consensus 90 ~d-~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 168 (368)
+| ..|+||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+..+ .+..+.||||+
T Consensus 106 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~ 166 (244)
T 3ui2_A 106 RDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREIL------------------KTTPKGNPMQF 166 (244)
T ss_dssp CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHH------------------TTCCCSSHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHH------------------hccCCCCHHHH
Confidence 88 78999999999999999999999998765 889999999999998632 34678999999
Q ss_pred HHHhCchHHHHHHHHh
Q 042244 169 LIDATLYDVALDLLKL 184 (368)
Q Consensus 169 a~~~~~~~~~~~Ll~~ 184 (368)
|+..|+.++++.|++.
T Consensus 167 a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 167 GRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHcChHHHHHHHHHh
Confidence 9999999999999875
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.7e-23 Score=169.67 Aligned_cols=125 Identities=18% Similarity=0.176 Sum_probs=113.0
Q ss_pred cCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC
Q 042244 47 TIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT 126 (368)
Q Consensus 47 ~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 126 (368)
.|.+|+||||+|+..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++++.+. +.+|.
T Consensus 6 ~~~~g~t~L~~A~~~~~--------~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~ 74 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGD--------IPSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGY 74 (137)
T ss_dssp CCTTCCCHHHHHHHHTC--------HHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCG
T ss_pred cCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCC
Confidence 47899999999999999 99999999998 778899999999999999999999999999998765 88999
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHH
Q 042244 127 LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLK 183 (368)
Q Consensus 127 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~ 183 (368)
+|+||||+|+.+|+.+++++|++.+.+... +|.+|+||||+|+..+..++++.+.+
T Consensus 75 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 75 QNDSPLHDAAKNGHVDIVKLLLSYGASRNA-VNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp GGCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHhhccHHHHHhhccc
Confidence 999999999999999999999999998886 99999999999998888777765544
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=4.7e-23 Score=176.37 Aligned_cols=143 Identities=10% Similarity=-0.047 Sum_probs=125.2
Q ss_pred CCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchh-cCCCcHHHHHHHcCCH----HHHHHHHhhCCCCccccC
Q 042244 51 GSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRD-DIGYTALYQCAVKGNL----RALKVLVKYNPDLTNKRD 125 (368)
Q Consensus 51 g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d-~~G~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~d 125 (368)
+.++||.|++.|+ .+.++.+++.+ + +.+| ..|+||||+|+..|+. +++++|++++.++ +.+|
T Consensus 6 ~~~~l~~Aa~~g~--------~~~~~~l~~~~-~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d 72 (186)
T 3t8k_A 6 EYRTVSAAAMLGT--------YEDFLELFEKG-Y---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRT 72 (186)
T ss_dssp HCSSHHHHHHHSC--------HHHHHHHHHHS-S---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCC
T ss_pred cccHHHHHHHcCC--------HHHHHHHHhcC-c---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCC
Confidence 5689999999999 99999999876 2 3445 7899999999999975 5999999999776 8999
Q ss_pred CCCCcHHHHHHhhCC------HHHHHHHHhhCCCCccccCCCCc-hHHHHHHHhC-----chHHHHHHHHhCCcccccCC
Q 042244 126 TLDSLPVIQAAYHGH------KDTFQYLREVTHGVDIYSGNDGA-NMLSRLIDAT-----LYDVALDLLKLYPTIGRDNI 193 (368)
Q Consensus 126 ~~G~tpLh~Aa~~g~------~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~a~~~~-----~~~~~~~Ll~~~~~~~~~~~ 193 (368)
.+|+||||+|+..++ .+++++|++.+++.+. +|.+|+ ||||+|+..+ +.++++.|++..+.+.+.+|
T Consensus 73 ~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~-~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d 151 (186)
T 3t8k_A 73 KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA-LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD 151 (186)
T ss_dssp TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS-CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC
T ss_pred CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc-cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC
Confidence 999999999999987 5789999999999987 999999 9999999843 45688999983349999999
Q ss_pred CCCCcHHHHHhcCC
Q 042244 194 DSRRIVLNALAEKP 207 (368)
Q Consensus 194 ~~g~Tpl~l~~~~~ 207 (368)
++|+||||+|++..
T Consensus 152 ~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 152 KWGLTALEFVKRCQ 165 (186)
T ss_dssp TTSCCHHHHHHTTT
T ss_pred CCCCCHHHHHHHcC
Confidence 99999999998864
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=3.4e-23 Score=167.81 Aligned_cols=128 Identities=16% Similarity=0.074 Sum_probs=113.3
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR 90 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~ 90 (368)
..+..|.||||.|+..|+.++++.|++.+.+. ...|..|+||||+|+..|+ .++++.|++.+ ..++.+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~~~~Ll~~g--~~~~~~ 72 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP--NVKDHAGWTPLHEACNHGH--------LKVVELLLQHK--ALVNTT 72 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHTTC--------HHHHHHHHHTT--CCTTCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CcccCc
Confidence 34678999999999999999999999986654 3458899999999999999 99999999998 778999
Q ss_pred hcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhC
Q 042244 91 DDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVT 151 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 151 (368)
|..|+||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+..+..++++++.+..
T Consensus 73 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 73 GYQNDSPLHDAAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 999999999999999999999999998765 889999999999999999988888776554
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=9.8e-23 Score=162.01 Aligned_cols=115 Identities=18% Similarity=0.201 Sum_probs=100.4
Q ss_pred CCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCC
Q 042244 48 IAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTL 127 (368)
Q Consensus 48 ~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 127 (368)
+..|.||||+|+..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++.+.+. +.+|.+
T Consensus 4 ~~~~~~~l~~A~~~~~--------~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~ 72 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGD--------LDEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKH 72 (123)
T ss_dssp ---CHHHHHHHHHTTC--------HHHHHHHHHTT--CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTT
T ss_pred ccccchHHHHHHHcCC--------HHHHHHHHHcC--CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCC
Confidence 5678899999999999 99999999988 668889999999999999999999999999988764 888999
Q ss_pred CCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCc
Q 042244 128 DSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATL 174 (368)
Q Consensus 128 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~ 174 (368)
|+||||+|+..|+.+++++|++.+.+... +|.+|+||||+|...+.
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGADKTV-KGPDGLTAFEATDNQAI 118 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHhCCHHH
Confidence 99999999999999999999999888876 89999999999854433
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=6.2e-23 Score=180.20 Aligned_cols=137 Identities=15% Similarity=0.070 Sum_probs=113.3
Q ss_pred CCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCC
Q 042244 48 IAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTL 127 (368)
Q Consensus 48 ~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 127 (368)
+.+|.||||+||..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++.....++.+|.+
T Consensus 70 ~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~ 139 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGN--------LSWLRECLDNR--VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL 139 (222)
T ss_dssp EEEESCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTT
T ss_pred ccccccccccccccCc--------HHHHHHHHhCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCC
Confidence 5678999999999999 99999999988 7789999999999999999999999999999833445899999
Q ss_pred CCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCC
Q 042244 128 DSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSR 196 (368)
Q Consensus 128 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g 196 (368)
|+||||+|+..|+.+++++|++.+.+... +|.+|+||||+|+..++.++++.+++.+ .....+|.+|
T Consensus 140 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~l~~l~~~~-~~~~~~~~~~ 206 (222)
T 3ehr_A 140 GDTALHAAAWKGYADIVQLLLAKGARTDL-RNIEKKLAFDMATNAACASLLKKKQGTD-AVRTLSNAED 206 (222)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCSCC-CCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccCCCCCHHHHhcchhHHHHHHHHhccc-hhhhccchhh
Confidence 99999999999999999999999999887 9999999999999999999999988876 5555555443
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=186.33 Aligned_cols=141 Identities=20% Similarity=0.117 Sum_probs=119.8
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCcccccc-----cCCCCCcHHHHHHHc---CCcccccCChHHHHHHHHhcCCchhh
Q 042244 16 RYWPLYRMIEKNDWRGVEDFVTNDPDALTAK-----TIAPGSMTIFHAIVE---LWVDVESDDATCLLDKLASKVDPQTL 87 (368)
Q Consensus 16 g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~-----~~~~g~tpLh~A~~~---g~~~~~~~~~~~~v~~Ll~~~~p~~~ 87 (368)
+.++||.|++.|+.+.++.+++.+++.. .. .+..|+||||+|+.. |+ .++++.|++.+ .++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~-~~~~~~~~~~~g~t~Lh~A~~~~~~~~--------~~iv~~Ll~~g--adv 219 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFG-QPLPGPDAQAPEELVLHLAVKVANQAS--------LPLVDFIIQNG--GHL 219 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTT-SCEECSSSCSCEECHHHHHHHTCCTTT--------HHHHHHHHHHS--SCT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCccc-ccCCCcccCCCCccHHHHHHHhcccCc--------HHHHHHHHhcC--CCC
Confidence 3467999999999999999999876653 21 478899999999997 78 99999999998 788
Q ss_pred hchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHH
Q 042244 88 EQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLS 167 (368)
Q Consensus 88 ~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh 167 (368)
+.+|.+|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++.+++ .|.||||
T Consensus 220 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh 291 (301)
T 2b0o_E 220 DAKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLH 291 (301)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhH
Confidence 999999999999999999999999999998775 89999999999999999999999999987654 5789999
Q ss_pred HHHHhCch
Q 042244 168 RLIDATLY 175 (368)
Q Consensus 168 ~a~~~~~~ 175 (368)
+|+..|+.
T Consensus 292 ~A~~~g~~ 299 (301)
T 2b0o_E 292 VDYSWVIS 299 (301)
T ss_dssp --------
T ss_pred HHHhcCCc
Confidence 99988763
No 96
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=4.1e-24 Score=202.44 Aligned_cols=161 Identities=13% Similarity=0.027 Sum_probs=128.4
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCC-cccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCch--hhh
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDP-DALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQ--TLE 88 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p-~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~--~~~ 88 (368)
...++.||||.|++.|+.++++.|++... +......+..|.||||+||..|+ .++|+.|++++ ++ ..+
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~--------~eiv~~Ll~~g-ad~~~~~ 158 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH--------LHVLNRLCELA-PTEIMAM 158 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC--------HHHHHHHHHSC-TTTHHHH
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCC--------HHHHHHHHhCC-CCccccc
Confidence 34456799999999999999999998854 21112346678999999999999 99999999998 32 123
Q ss_pred chhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccc--cCCCCCcHHHHHH-hhCCHHHHHHHHhhCCCCccccCCCCchH
Q 042244 89 QRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNK--RDTLDSLPVIQAA-YHGHKDTFQYLREVTHGVDIYSGNDGANM 165 (368)
Q Consensus 89 ~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~--~d~~G~tpLh~Aa-~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 165 (368)
..+.+ +||||+|+..|+.+++++|++++++. +. .|.+|+||||+|+ .+|+.+++++|++.+. +|.||
T Consensus 159 i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~ta 228 (376)
T 2aja_A 159 IQAEN-YHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYA 228 (376)
T ss_dssp HSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHH
T ss_pred cCCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchH
Confidence 33333 89999999999999999999998765 44 7888999999999 9999999999998542 38899
Q ss_pred HHHHHHhCchHHHHHHHHhCCcccccC
Q 042244 166 LSRLIDATLYDVALDLLKLYPTIGRDN 192 (368)
Q Consensus 166 Lh~a~~~~~~~~~~~Ll~~~~~~~~~~ 192 (368)
||.|+..|+.+++++|++.+ ...+.+
T Consensus 229 L~~Aa~~g~~evv~lL~~~g-a~~~~~ 254 (376)
T 2aja_A 229 EIHEFEYGEKYVNPFIARHV-NRLKEM 254 (376)
T ss_dssp HHCTTTTTTTTHHHHHHHHH-HHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhcC-cccccc
Confidence 99999999999999999876 444433
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=1.1e-22 Score=178.60 Aligned_cols=139 Identities=15% Similarity=0.141 Sum_probs=112.7
Q ss_pred hhhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch
Q 042244 11 DEYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR 90 (368)
Q Consensus 11 ~~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~ 90 (368)
..+..|.||||.|+..|+.++++.|++.+.+. ...|..|+||||+||..|+ .++++.|++.. ...++.+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~~-g~~~~~~ 136 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGV--NGLDKAGSTALYWACHGGH--------KDIVEMLFTQP-NIELNQQ 136 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTC--------HHHHHHHTTST-TCCCCCC
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCc--cccCCCCCCHHHHHHHcCC--------HHHHHHHHcCC-CCCcccc
Confidence 45667899999999999999999999986654 4458899999999999999 99999999983 3778999
Q ss_pred hcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCC
Q 042244 91 DDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDG 162 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g 162 (368)
|..|+||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+..++.++++.+++.+..... .|.+|
T Consensus 137 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~-~~~~~ 206 (222)
T 3ehr_A 137 NKLGDTALHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL-SNAED 206 (222)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc-cchhh
Confidence 999999999999999999999999998765 88999999999999999999999999998887654 44433
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=2.1e-22 Score=160.07 Aligned_cols=117 Identities=16% Similarity=0.148 Sum_probs=103.7
Q ss_pred ccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcC
Q 042244 14 CARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDI 93 (368)
Q Consensus 14 ~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~ 93 (368)
..|.||||.|++.|+.+.++.|++.+++. ...|..|+||||+|+..|+ .++++.|++.+ ..++.+|..
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~--~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~~~~d~~ 72 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDV--NRTLEGGRKPLHYAADCGQ--------LEILEFLLLKG--ADINAPDKH 72 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCT--TSCCTTSSCHHHHHHHTTC--------HHHHHHHHTTT--CCTTCCCTT
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCc--CccCCCCCcHHHHHHHcCC--------HHHHHHHHHcC--CCCCcCCCC
Confidence 46789999999999999999999987664 4458899999999999999 99999999998 778999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHH
Q 042244 94 GYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDT 143 (368)
Q Consensus 94 G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~ 143 (368)
|+||||+|+..|+.+++++|++++.+. +.+|.+|+||||+|+..+..++
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhCCHHHHHH
Confidence 999999999999999999999998775 8899999999999965544443
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=5.6e-22 Score=168.94 Aligned_cols=128 Identities=16% Similarity=0.127 Sum_probs=114.2
Q ss_pred CCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccC-C
Q 042244 48 IAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRD-T 126 (368)
Q Consensus 48 ~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~ 126 (368)
+.+|+||||+|+..|+ .++++.|++ + ..++.+|..|+||||+|+..|+.+++++|++++.+. +.+| .
T Consensus 41 ~~~g~t~L~~A~~~g~--------~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~ 108 (183)
T 3deo_A 41 VSEYETPWWTAARKAD--------EQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMR 108 (183)
T ss_dssp HHHHHHHHHHHHHTTC--------HHHHHHHTT-T--SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSS
T ss_pred CCCCCCHHHHHHHcCC--------HHHHHHHHh-c--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCC
Confidence 5689999999999999 999999999 6 678899999999999999999999999999998776 6666 8
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 127 LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 127 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
+|+||||+|+.+|+.+++++|++++.+.+. +|.+|+||||+|++.++. ..+.+|++.+++.
T Consensus 109 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~ 169 (183)
T 3deo_A 109 GGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELAREILKT------------------TPKGNPMQFGRRI 169 (183)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHH
T ss_pred CCCCHHHHHHhcCcHHHHHHHHHcCCCCcC-CCCCCCCHHHHHHHhccC------------------cccccHHHHHHHc
Confidence 899999999999999999999999998886 999999999999875433 3467888887664
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=1.8e-21 Score=179.21 Aligned_cols=137 Identities=12% Similarity=0.008 Sum_probs=120.3
Q ss_pred CCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc------hhcCCCcHHHHHHHc---CCHHHHHHHHhhCCCCc
Q 042244 51 GSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ------RDDIGYTALYQCAVK---GNLRALKVLVKYNPDLT 121 (368)
Q Consensus 51 g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~------~d~~G~tpLh~A~~~---g~~~~v~~Ll~~~~~~~ 121 (368)
+.++||.|+..|+ .+.++.|++.+ .+++. .|..|+||||+|+.. |+.+++++|++++.++
T Consensus 151 ~~~~L~~A~~~g~--------~~~v~~ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv- 219 (301)
T 2b0o_E 151 EPQRLWTAICNRD--------LLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL- 219 (301)
T ss_dssp CHHHHHHHHHTTC--------HHHHHHHHHTT--CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-
T ss_pred hHHHHhhhhhccC--------HHHHHHHHhcC--CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-
Confidence 4567999999999 99999999988 55555 688999999999997 8999999999998765
Q ss_pred cccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHH
Q 042244 122 NKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLN 201 (368)
Q Consensus 122 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~ 201 (368)
+.+|.+|+||||+|+.+|+.+++++|++.+++.+. +|.+|+||||+|+..++.++++.|++.+ . ..|.||+|
T Consensus 220 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-a------~~g~tpLh 291 (301)
T 2b0o_E 220 DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQ-A------GTFAFPLH 291 (301)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSC-CCTTSCCHHHHHHHHTCHHHHHHHHHHH-H------HTTSSCCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHhc-C------CCCCChhH
Confidence 88999999999999999999999999999999886 9999999999999999999999999876 2 26899999
Q ss_pred HHhcC
Q 042244 202 ALAEK 206 (368)
Q Consensus 202 l~~~~ 206 (368)
+|++.
T Consensus 292 ~A~~~ 296 (301)
T 2b0o_E 292 VDYSW 296 (301)
T ss_dssp -----
T ss_pred HHHhc
Confidence 99875
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=1.1e-21 Score=175.21 Aligned_cols=155 Identities=14% Similarity=0.059 Sum_probs=125.7
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCC
Q 042244 16 RYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGY 95 (368)
Q Consensus 16 g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~ 95 (368)
+.+++..+...|+.+.+..+.... ...+.+|.||||+|+..|+ .++++.|++ + ..++.+|..|+
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~-----~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~-~--~~~~~~d~~g~ 78 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIA-----ADVVSEYETPWWTAARKAD--------EQALSQLLE-D--RDVDAVDENGR 78 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSC-----HHHHHHHHHHHHHHHTTTC--------HHHHHHTTT-T--CCTTCBCTTSC
T ss_pred CccHHHHHHHcCCCcccccccccc-----cccccCCCCHHHHHHHcCC--------HHHHHHHHc-C--CCCCCcCCCCC
Confidence 344455555555544433322221 2235679999999999999 999999999 6 67899999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCCccccC-CCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCc
Q 042244 96 TALYQCAVKGNLRALKVLVKYNPDLTNKRD-TLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATL 174 (368)
Q Consensus 96 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~ 174 (368)
||||+|+..|+.+++++|++++.++ +.+| ..|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||+|+..++
T Consensus 79 t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 79 TALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELAREILK 156 (244)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHHT
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHHHh
Confidence 9999999999999999999998776 6666 7899999999999999999999999998886 99999999999986322
Q ss_pred hHHHHHHHHhCCcccccCCCCCCcHHHHHhcC
Q 042244 175 YDVALDLLKLYPTIGRDNIDSRRIVLNALAEK 206 (368)
Q Consensus 175 ~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~ 206 (368)
+..+.||+|++++.
T Consensus 157 ------------------~~~~~~~l~~a~~~ 170 (244)
T 3ui2_A 157 ------------------TTPKGNPMQFGRRI 170 (244)
T ss_dssp ------------------TCCCSSHHHHHHHH
T ss_pred ------------------ccCCCCHHHHHHHc
Confidence 25678999998764
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=1.3e-22 Score=192.07 Aligned_cols=124 Identities=14% Similarity=0.094 Sum_probs=103.5
Q ss_pred hhccCChHHHHHHHhCCHHHHHHHHHcCCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhc--
Q 042244 12 EYCARYWPLYRMIEKNDWRGVEDFVTNDPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQ-- 89 (368)
Q Consensus 12 ~~~~g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~-- 89 (368)
.+..|.||||.|++.|+.++|+.|++.+++......+..+.||||+||..|+ .++++.|++++ ..++.
T Consensus 124 ~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~--------~eiv~~Ll~~g--a~~~~~~ 193 (376)
T 2aja_A 124 IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGH--------LHVLNRLCELA--PTEATAM 193 (376)
T ss_dssp -CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTC--------HHHHHHHHHSC--GGGHHHH
T ss_pred hccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCC--------HHHHHHHHHcC--Cccchhc
Confidence 3446778999999999999999999998642101112222999999999999 99999999998 55565
Q ss_pred hhcCCCcHHHHHH-HcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCC
Q 042244 90 RDDIGYTALYQCA-VKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHG 153 (368)
Q Consensus 90 ~d~~G~tpLh~A~-~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~ 153 (368)
+|.+|.||||+|+ ..|+.+++++|++.+. .|.||||+|+.+|+.+++++|++.+.+
T Consensus 194 ~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 194 IQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp HHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcc
Confidence 8999999999999 9999999999998542 389999999999999999999987653
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=2.2e-20 Score=169.97 Aligned_cols=128 Identities=19% Similarity=0.247 Sum_probs=116.0
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCccc----ccccCCCCCcHHHHHHHc---CCcccccCChHHHHHHHHhcCCchhhh
Q 042244 16 RYWPLYRMIEKNDWRGVEDFVTNDPDAL----TAKTIAPGSMTIFHAIVE---LWVDVESDDATCLLDKLASKVDPQTLE 88 (368)
Q Consensus 16 g~t~Lh~A~~~G~~~~v~~Ll~~~p~~~----~~~~~~~g~tpLh~A~~~---g~~~~~~~~~~~~v~~Ll~~~~p~~~~ 88 (368)
..++|+.|+..|+.+.++.+++.+++.. ....|..|+||||+|+.. |+ .++++.|++.+ .+++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~--------~~~v~~Ll~~g--a~in 199 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS--------LHIVDFLVQNS--GNLD 199 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTT--------HHHHHHHHHHC--SCTT
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccch--------HHHHHHHHHCC--CCcc
Confidence 4579999999999999999999877643 133478899999999999 88 99999999998 7899
Q ss_pred chhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCC
Q 042244 89 QRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGV 154 (368)
Q Consensus 89 ~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 154 (368)
.+|..|+||||+|+..|+.+++++|++++.++ +.+|.+|+||||+|+..|+.+++++|++.+++.
T Consensus 200 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 200 KQTGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999999998775 899999999999999999999999999987764
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=1.4e-20 Score=177.53 Aligned_cols=144 Identities=13% Similarity=0.106 Sum_probs=79.3
Q ss_pred CCCcHHHHHHHc-CCcccccCChHHHHHHHHhcCCchhhhchh--cCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC
Q 042244 50 PGSMTIFHAIVE-LWVDVESDDATCLLDKLASKVDPQTLEQRD--DIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT 126 (368)
Q Consensus 50 ~g~tpLh~A~~~-g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d--~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 126 (368)
.+.|+||.|+.. |+ .++++.|++.+ .+++..| ..|.||||+|+..|+.+++++|++++.++ +.+|.
T Consensus 198 ~~~t~L~~Aa~~~g~--------~~~v~~LL~~G--advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~ 266 (368)
T 3jue_A 198 HPGALLFRASGHPPS--------LPTMADALAHG--ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADS 266 (368)
T ss_dssp CHHHHHHHHTSSSCC--------HHHHHHHHHTT--CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT
T ss_pred CCCcHHHHHHHccCC--------HHHHHHHHHcC--CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCC
Confidence 445666666666 66 66666666665 4455555 56666666666666666666666665543 56666
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCc--ccccCCCCCCcHHHHHh
Q 042244 127 LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPT--IGRDNIDSRRIVLNALA 204 (368)
Q Consensus 127 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~--~~~~~~~~g~Tpl~l~~ 204 (368)
+|+||||+|+..|+.+++++|++.+++.+. +|.+|.||||+|+..++.+++++|++.+.. .....+..+.|+++++.
T Consensus 267 ~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~-~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 267 AGRGPLHHATILGHTGLACLFLKRGADLGA-RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHCcCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 666666666666666666666666666554 666666666666666666666666654321 22234455666666554
Q ss_pred c
Q 042244 205 E 205 (368)
Q Consensus 205 ~ 205 (368)
.
T Consensus 346 ~ 346 (368)
T 3jue_A 346 D 346 (368)
T ss_dssp -
T ss_pred H
Confidence 4
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=2.3e-20 Score=140.70 Aligned_cols=92 Identities=24% Similarity=0.294 Sum_probs=75.9
Q ss_pred CCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCC
Q 042244 50 PGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDS 129 (368)
Q Consensus 50 ~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 129 (368)
+|+||||+|+..|+ .++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++++.+. +.+|.+|+
T Consensus 1 ~g~t~L~~A~~~~~--------~~~v~~Ll~~g--~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~ 69 (93)
T 1n0q_A 1 NGRTPLHLAARNGH--------LEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGR 69 (93)
T ss_dssp --CCHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred CCCcHHHHHHHcCC--------HHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCC
Confidence 47888888888888 88888888887 667888888888888888888888888888887664 77888888
Q ss_pred cHHHHHHhhCCHHHHHHHHhhCC
Q 042244 130 LPVIQAAYHGHKDTFQYLREVTH 152 (368)
Q Consensus 130 tpLh~Aa~~g~~~~v~~Ll~~~~ 152 (368)
||||+|+..|+.+++++|++.++
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 70 TPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC
Confidence 88888888888888888887765
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=2.2e-20 Score=176.25 Aligned_cols=117 Identities=15% Similarity=0.050 Sum_probs=99.9
Q ss_pred hchhcCCCcHHHHHHHc-CCHHHHHHHHhhCCCCccccC--CCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCch
Q 042244 88 EQRDDIGYTALYQCAVK-GNLRALKVLVKYNPDLTNKRD--TLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGAN 164 (368)
Q Consensus 88 ~~~d~~G~tpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~d--~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 164 (368)
+..+..+.|+||.|+.. |+.++++.|++.+.++ +..| .+|.||||+|+..|+.+++++|++.+.+.+. +|.+|+|
T Consensus 193 ~l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~T 270 (368)
T 3jue_A 193 DLGSLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRG 270 (368)
T ss_dssp ----CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred ccccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCC
Confidence 44455677899999998 9999999999988765 6666 7899999999999999999999999888886 8999999
Q ss_pred HHHHHHHhCchHHHHHHHHhCCcccccCCCCCCcHHHHHhcCC
Q 042244 165 MLSRLIDATLYDVALDLLKLYPTIGRDNIDSRRIVLNALAEKP 207 (368)
Q Consensus 165 ~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl~l~~~~~ 207 (368)
|||+|+..|+.+++++|++.+ .+.+.+|.+|.||||+|+...
T Consensus 271 pLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g 312 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETA 312 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCC
Confidence 999999999999999999886 888889999999999988764
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=3.8e-20 Score=182.03 Aligned_cols=135 Identities=20% Similarity=0.141 Sum_probs=113.3
Q ss_pred hHHHHHHHhCCHHHHHHHHHcCCcccc----cccCCCCCcHHHHHHH---cCCcccccCChHHHHHHHHhcCCchhhhch
Q 042244 18 WPLYRMIEKNDWRGVEDFVTNDPDALT----AKTIAPGSMTIFHAIV---ELWVDVESDDATCLLDKLASKVDPQTLEQR 90 (368)
Q Consensus 18 t~Lh~A~~~G~~~~v~~Ll~~~p~~~~----~~~~~~g~tpLh~A~~---~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~ 90 (368)
+.||.|+..|+.+.++.|++.+.+... ...|..|+||||+||. .|+ .++++.|++.+ .+++.+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~--------~~~v~~Ll~~g--a~vn~~ 203 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS--------LPLVDFIIQNG--GHLDAK 203 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTT--------HHHHHHHHHHS--CCTTCC
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhccccc--------HHHHHHHHHcC--CCCCcc
Confidence 679999999999999999998765420 1127789999999977 888 99999999998 889999
Q ss_pred hcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHH
Q 042244 91 DDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLI 170 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~ 170 (368)
|.+|+||||+|+..|+.+++++|++++.++ +.+|.+|+||||+|+..|+.+++++|++.+++... +|+|.+.
T Consensus 204 d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-------~~~h~~~ 275 (497)
T 3lvq_E 204 AADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-------FPLHVDY 275 (497)
T ss_dssp CSSSCCHHHHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------------
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-------Ccceeec
Confidence 999999999999999999999999999775 89999999999999999999999999999987654 5666543
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=3.4e-19 Score=162.06 Aligned_cols=123 Identities=14% Similarity=0.071 Sum_probs=112.8
Q ss_pred CcHHHHHHHcCCcccccCChHHHHHHHHhcCCchh-----hhchhcCCCcHHHHHHHc---CCHHHHHHHHhhCCCCccc
Q 042244 52 SMTIFHAIVELWVDVESDDATCLLDKLASKVDPQT-----LEQRDDIGYTALYQCAVK---GNLRALKVLVKYNPDLTNK 123 (368)
Q Consensus 52 ~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~-----~~~~d~~G~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~ 123 (368)
.++||.|+..|+ .+.++.+++.+ .+. ++..|..|+||||+|+.. |+.+++++|++++.++ +.
T Consensus 131 l~~l~~a~~~~d--------~~~~~~ll~~g-~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~ 200 (278)
T 1dcq_A 131 LHSLCEAVKTRD--------IFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DK 200 (278)
T ss_dssp HHHHHHHHHTTC--------HHHHHHHHHTT-CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TC
T ss_pred hhhhhhHhhhcc--------cHHHHHHHHhh-cchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cc
Confidence 368999999999 99999999988 332 445588999999999999 8999999999998775 89
Q ss_pred cCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhC
Q 042244 124 RDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLY 185 (368)
Q Consensus 124 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~ 185 (368)
+|.+|+||||+|+.+|+.+++++|++.+++.+. +|.+|+||||+|+..|+.++++.|++.+
T Consensus 201 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 201 QTGKGSTALHYCCLTDNAECLKLLLRGKASIEI-ANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-ccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999999999999887 9999999999999999999999999886
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=1.8e-19 Score=177.15 Aligned_cols=129 Identities=12% Similarity=0.003 Sum_probs=115.1
Q ss_pred CCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhch------hcCCCcHHHHHHH---cCCHHHHHHHHhhCCCCc
Q 042244 51 GSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQR------DDIGYTALYQCAV---KGNLRALKVLVKYNPDLT 121 (368)
Q Consensus 51 g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~------d~~G~tpLh~A~~---~g~~~~v~~Ll~~~~~~~ 121 (368)
..+.||.|+..|+ .+.++.|++.+ .+++.+ |..|+||||+|+. .|+.+++++|++++.++
T Consensus 132 ~~~~L~~A~~~g~--------~~~v~~ll~~g--~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v- 200 (497)
T 3lvq_E 132 EPQRLWTAICNRD--------LLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL- 200 (497)
T ss_dssp CHHHHHHHHHHTC--------HHHHHHHHHTT--CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-
T ss_pred cHHHHHHHHhccC--------HHHHHHHHhhc--ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-
Confidence 4478999999999 99999999998 666665 8899999999976 89999999999999775
Q ss_pred cccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHhCchHHHHHHHHhCCcccccC
Q 042244 122 NKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDATLYDVALDLLKLYPTIGRDN 192 (368)
Q Consensus 122 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~~~~~~~~~Ll~~~~~~~~~~ 192 (368)
+.+|.+|+||||+|+.+|+.+++++|++++++.+. +|.+|+||||+|+..|+.++++.|++.+ ...+..
T Consensus 201 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~ 269 (497)
T 3lvq_E 201 DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQ-AGTFAF 269 (497)
T ss_dssp TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSC-CCTTCCCHHHHHHHTTCHHHHHHHHHTC-C-----
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHhC-CCCCCC
Confidence 89999999999999999999999999999999887 9999999999999999999999999987 555443
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=7.9e-20 Score=143.21 Aligned_cols=107 Identities=21% Similarity=0.229 Sum_probs=76.8
Q ss_pred cCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCC
Q 042244 47 TIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDT 126 (368)
Q Consensus 47 ~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 126 (368)
.|.+|+||||+||..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++.+.+. +.+|.
T Consensus 5 ~d~~g~t~L~~A~~~~~--------~~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~ 73 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGH--------AEEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSK 73 (115)
T ss_dssp CSCSSCCHHHHHHHHTC--------HHHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCT
T ss_pred cCCCCCCHHHHHHHcCC--------HHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCC
Confidence 36677777777777777 77777777776 556677777777777777777777777777776554 66777
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchH
Q 042244 127 LDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANM 165 (368)
Q Consensus 127 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 165 (368)
+|+||||+|+.+++.+++++|++++++.+. ++..|.+|
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~-~~~~~~~~ 111 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDAKGADVNA-RSWGSSHH 111 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTSSSHHH-HSCCCC--
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCc-CCcccccc
Confidence 777777777777777777777777776665 66666665
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=3.7e-19 Score=134.00 Aligned_cols=91 Identities=26% Similarity=0.312 Sum_probs=85.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHHHHHh
Q 042244 93 IGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSRLIDA 172 (368)
Q Consensus 93 ~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~a~~~ 172 (368)
+|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHc
Confidence 4899999999999999999999998765 88999999999999999999999999999998886 999999999999999
Q ss_pred CchHHHHHHHHhC
Q 042244 173 TLYDVALDLLKLY 185 (368)
Q Consensus 173 ~~~~~~~~Ll~~~ 185 (368)
|+.++++.|++.+
T Consensus 79 ~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 79 GHLEVVKLLLEAG 91 (93)
T ss_dssp TCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcC
Confidence 9999999999876
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=1.8e-19 Score=141.11 Aligned_cols=109 Identities=18% Similarity=0.096 Sum_probs=99.8
Q ss_pred chhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCchHHHH
Q 042244 89 QRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGANMLSR 168 (368)
Q Consensus 89 ~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 168 (368)
.+|.+|+||||+|+..|+.+++++|++.+.+. +.+|..|+||||+|+..++.+++++|++.+.+... +|.+|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHH
Confidence 57899999999999999999999999998764 88999999999999999999999999999998876 89999999999
Q ss_pred HHHhCchHHHHHHHHhCCcccccCCCCCCcHH
Q 042244 169 LIDATLYDVALDLLKLYPTIGRDNIDSRRIVL 200 (368)
Q Consensus 169 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~Tpl 200 (368)
|+..++.++++.|++.+ .+.+.++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~~g-a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKG-ADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTS-SSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcC-CCCCcCCccccccc
Confidence 99999999999999887 88999999998874
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=1.1e-17 Score=130.02 Aligned_cols=92 Identities=17% Similarity=0.171 Sum_probs=68.4
Q ss_pred cccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCcccc
Q 042244 45 AKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKR 124 (368)
Q Consensus 45 ~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~ 124 (368)
...|.+|.||||+|+..|+ .++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++++.+. +.+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~--------~~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~ 86 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQ--------DDEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQ 86 (110)
T ss_dssp ----CCHHHHHHHHHHHTC--------HHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCC
T ss_pred cccCCccchHHHHHHHcCC--------HHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccc
Confidence 3447777888888888888 88888888776 567777777888888888888888888888776554 677
Q ss_pred CCCCCcHHHHHHhhCCHHHHHHH
Q 042244 125 DTLDSLPVIQAAYHGHKDTFQYL 147 (368)
Q Consensus 125 d~~G~tpLh~Aa~~g~~~~v~~L 147 (368)
|.+|+||||+|+.+|+.+++++|
T Consensus 87 d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 87 DKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccCCCcHHHHHHHcCCHHHHHHh
Confidence 77788888888888887777765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=3.4e-17 Score=127.32 Aligned_cols=96 Identities=22% Similarity=0.188 Sum_probs=83.0
Q ss_pred chhhhchhcCCCcHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCCCCccccCCCCc
Q 042244 84 PQTLEQRDDIGYTALYQCAVKGNLRALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTHGVDIYSGNDGA 163 (368)
Q Consensus 84 p~~~~~~d~~G~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 163 (368)
|......|.+|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+.+|+.+++++|++.+.+.+. +|.+|+
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~ 91 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGK 91 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSC
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccCCC
Confidence 4557788999999999999999999999999998765 88999999999999999999999999999988876 999999
Q ss_pred hHHHHHHHhCchHHHHHH
Q 042244 164 NMLSRLIDATLYDVALDL 181 (368)
Q Consensus 164 t~Lh~a~~~~~~~~~~~L 181 (368)
||||+|+..|+.++++.|
T Consensus 92 tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 92 TAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CHHHHHHHHTCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHh
Confidence 999999999999998865
No 115
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=47.26 E-value=43 Score=30.19 Aligned_cols=51 Identities=10% Similarity=-0.182 Sum_probs=27.4
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHc-CCcccccccCCCCCcHHHHHHHcCC
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTN-DPDALTAKTIAPGSMTIFHAIVELW 63 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~-~p~~~~~~~~~~g~tpLh~A~~~g~ 63 (368)
+..|.-.+-.....++.+..+.+.++ .|....-..|..|...+--....+.
T Consensus 34 dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQklle~~~ 85 (351)
T 3gvo_A 34 DQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGS 85 (351)
T ss_dssp SHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHCC
T ss_pred CCcchHHHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHHHHHhhCC
Confidence 33444455555666666655555544 3333323346666666666666665
No 116
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=43.22 E-value=74 Score=28.58 Aligned_cols=51 Identities=12% Similarity=0.032 Sum_probs=29.3
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHc-CCcccccccCCCCCcHHHHHHHcCC
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTN-DPDALTAKTIAPGSMTIFHAIVELW 63 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~-~p~~~~~~~~~~g~tpLh~A~~~g~ 63 (368)
+..|+..+-.....|+.+....+++. .+....-..+..|...+.-+.....
T Consensus 70 d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~ 121 (351)
T 3gvo_A 70 DVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESIS 121 (351)
T ss_dssp STTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSC
T ss_pred ChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCC
Confidence 55666666666677777666666654 3333323335566666655555554
No 117
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=31.32 E-value=75 Score=28.77 Aligned_cols=163 Identities=10% Similarity=-0.005 Sum_probs=81.0
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHc-CCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchhh-hch
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTN-DPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQTL-EQR 90 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~-~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~~-~~~ 90 (368)
+..|.-.+-.+...++.+..+.+.++ .|....-..|..|...+.-....+. .+..+.+++...+... -..
T Consensus 39 d~~gsR~lQ~~l~~~~~~~~~~I~~el~~~~~~L~~d~~gn~vvQkll~~~~--------~~~~~~i~~~~~g~~~~L~~ 110 (369)
T 3k49_A 39 DQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGS--------KIQKNTLVDQFKGNMKQLSL 110 (369)
T ss_dssp SHHHHHHHHHHHTTCCHHHHHHHHHHHGGGHHHHHHSTTTHHHHHHHHHHCC--------HHHHHHHHHHHTTCHHHHHH
T ss_pred CCcchHHHHHHhccCCHHHHHHHHHHHHHHHHHHhhCcccccHHHHHHHhCC--------HHHHHHHHHHHhhhHHHHhc
Confidence 33444556666666776666666655 4444434457777777777777776 5555555554311111 123
Q ss_pred hcCCCcHHHHHHHcCCHHHHHHHHhh-CCCCc-cccCCCCCcHHHHHHhhCCHHHHHHHHhhCCC--CccccCCCCchHH
Q 042244 91 DDIGYTALYQCAVKGNLRALKVLVKY-NPDLT-NKRDTLDSLPVIQAAYHGHKDTFQYLREVTHG--VDIYSGNDGANML 166 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~~~~v~~Ll~~-~~~~~-~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~--~~~~~~~~g~t~L 166 (368)
+..|.-.+.-+......+-...+++. .+... -..|.+|+..+......+..+-.+.+++.-.. .....++.|...+
T Consensus 111 ~~~G~rVlQk~le~~~~~q~~~ii~el~~~~~~L~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~~~~~~~~ls~~~~Gs~Vv 190 (369)
T 3k49_A 111 QMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVI 190 (369)
T ss_dssp STTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHHHHHHHHSCGGGCHHHHHHHTTTHHHHHTSTTHHHHH
T ss_pred ChhhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCccCcHH
Confidence 44455455555544444433333332 22211 13566666666655555543322222222111 1113566676666
Q ss_pred HHHHHhCchHHHHHHHH
Q 042244 167 SRLIDATLYDVALDLLK 183 (368)
Q Consensus 167 h~a~~~~~~~~~~~Ll~ 183 (368)
..+...+..+.-+.+++
T Consensus 191 q~~l~~~~~~~~~~i~~ 207 (369)
T 3k49_A 191 QRLLEFGSSEDQESILN 207 (369)
T ss_dssp HHHHHHSCHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHH
Confidence 66666665554444443
No 118
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=29.46 E-value=38 Score=19.76 Aligned_cols=20 Identities=20% Similarity=-0.066 Sum_probs=16.0
Q ss_pred HHHHHHHcCCcccccCChHHHHHHHHhc
Q 042244 54 TIFHAIVELWVDVESDDATCLLDKLASK 81 (368)
Q Consensus 54 pLh~A~~~g~~~~~~~~~~~~v~~Ll~~ 81 (368)
-++.||+.|+ .+.++.|-..
T Consensus 16 qiyvA~seGd--------~etv~~Le~Q 35 (40)
T 1gp8_A 16 QMDAAASKGD--------VETYRKLKAK 35 (40)
T ss_dssp HHHHHHTTSC--------HHHHHHHHHH
T ss_pred HHHHHHhcCC--------HHHHHHHHHH
Confidence 4689999999 9998887543
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.03 E-value=1.9e+02 Score=26.80 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=40.5
Q ss_pred HHHHHhCCHHHHHHHHHcCCccccc----------cc--CCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcC
Q 042244 21 YRMIEKNDWRGVEDFVTNDPDALTA----------KT--IAPGSMTIFHAIVELWVDVESDDATCLLDKLASKV 82 (368)
Q Consensus 21 h~A~~~G~~~~v~~Ll~~~p~~~~~----------~~--~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~ 82 (368)
+..+..|+.+.|+.-+..+.+..+. .. -.-|.|.+|+|++..+ .+++..|+...
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r--------~~~l~~ll~~~ 92 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQR--------QDMLAILLTEV 92 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTC--------HHHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhh--------hhHHHHhhhcc
Confidence 4557789999999999875543211 11 1359999999999999 99999888743
No 120
>3bwt_A Protein PUF4; pumilio, RNA binding, HO endonuclease, transcription, RNA binding protein; 2.69A {Saccharomyces cerevisiae} PDB: 4dzs_A 3bx2_A 3bx3_A
Probab=21.09 E-value=1e+02 Score=27.30 Aligned_cols=160 Identities=14% Similarity=0.084 Sum_probs=83.0
Q ss_pred hccCChHHHHHHHhCCHHHHHHHHHc-CCcccccccCCCCCcHHHHHHHcCCcccccCChHHHHHHHHhcCCchh-hhch
Q 042244 13 YCARYWPLYRMIEKNDWRGVEDFVTN-DPDALTAKTIAPGSMTIFHAIVELWVDVESDDATCLLDKLASKVDPQT-LEQR 90 (368)
Q Consensus 13 ~~~g~t~Lh~A~~~G~~~~v~~Ll~~-~p~~~~~~~~~~g~tpLh~A~~~g~~~~~~~~~~~~v~~Ll~~~~p~~-~~~~ 90 (368)
+..|.-.+-.....++.+....++++ .|....-..|..|...+--....+. .+....+++...+.. --..
T Consensus 21 ~q~gsr~iQ~~l~~~~~~~~~~i~~el~~~~~~L~~d~~gn~vvQkll~~~~--------~~~~~~i~~~~~~~~~~l~~ 92 (333)
T 3bwt_A 21 DQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT--------TEQRIVLTKISSPHFVEISL 92 (333)
T ss_dssp SHHHHHHHHHHHHHSCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHSC--------HHHHHHHHHHHGGGHHHHHH
T ss_pred CcHhhHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHhhCC--------HHHHHHHHHHHHhHHHHHHh
Confidence 44455566777777787777777665 4444434457778777776666666 554444444321111 1123
Q ss_pred hcCCCcHHHHHHHcCC-HH----HHHHHHhhCCCCccccCCCCCcHHHHHHhhCCHHHHHHHHhhCC--CCccccCCCCc
Q 042244 91 DDIGYTALYQCAVKGN-LR----ALKVLVKYNPDLTNKRDTLDSLPVIQAAYHGHKDTFQYLREVTH--GVDIYSGNDGA 163 (368)
Q Consensus 91 d~~G~tpLh~A~~~g~-~~----~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~--~~~~~~~~~g~ 163 (368)
|..|.-.+--+..... .+ +++.|...- ..-..|.+|+..+......+..+-.+.+++.-. -.....+..|.
T Consensus 93 ~~~G~rviQ~~l~~~~~~~~~~~i~~el~~~~--~~L~~d~~gn~Viqk~l~~~~~~~~~~i~~~l~~~~~~l~~~~~Gs 170 (333)
T 3bwt_A 93 NPHGTRALQKLIECIKTDEEAQIVVDSLRPYT--VQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGC 170 (333)
T ss_dssp STTHHHHHHHHHHHCCSHHHHHHHHHHHGGGH--HHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHHSHHHHHTSTTHH
T ss_pred cccccHHHHHHHHhcCcHHHHHHHHHHHHHHH--HHHhcCCcccHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcCchhH
Confidence 4445444444443322 22 222222111 112357777777777666666654444443211 11113567777
Q ss_pred hHHHHHHHhCchHHHHHHH
Q 042244 164 NMLSRLIDATLYDVALDLL 182 (368)
Q Consensus 164 t~Lh~a~~~~~~~~~~~Ll 182 (368)
..+..+...+..+-.+.++
T Consensus 171 ~Vvq~~l~~~~~~~~~~l~ 189 (333)
T 3bwt_A 171 CVLQRCLDHGTTEQCDNLC 189 (333)
T ss_dssp HHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHH
Confidence 7777776666554433333
Done!