Query 042247
Match_columns 253
No_of_seqs 201 out of 1198
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 07:03:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 9.8E-49 3.3E-53 333.2 24.9 223 1-223 60-301 (307)
2 1a6q_A Phosphatase 2C; catalyt 100.0 4.9E-47 1.7E-51 330.7 25.7 224 1-224 58-296 (382)
3 2i0o_A Ser/Thr phosphatase; be 100.0 1.1E-47 3.8E-52 326.3 20.7 220 1-220 56-304 (304)
4 2iq1_A Protein phosphatase 2C 100.0 4.2E-47 1.4E-51 318.3 22.6 215 1-224 40-266 (274)
5 3qn1_B Protein phosphatase 2C 100.0 1.5E-46 5.1E-51 323.4 22.4 218 1-224 67-332 (337)
6 2irm_A Mitogen-activated prote 100.0 1.1E-46 3.7E-51 326.8 16.8 220 1-221 55-357 (358)
7 3kdj_B Protein phosphatase 2C 100.0 4.4E-46 1.5E-50 318.1 20.2 216 1-224 57-309 (316)
8 4da1_A Protein phosphatase 1K, 100.0 1.9E-45 6.5E-50 322.1 22.0 215 1-224 154-380 (389)
9 3d8k_A PP2C, protein phosphata 100.0 5.6E-45 1.9E-49 317.1 22.3 217 1-224 53-328 (377)
10 2isn_A NYSGXRC-8828Z, phosphat 100.0 1.6E-44 5.4E-49 313.2 24.4 219 1-223 48-336 (364)
11 2i44_A Serine-threonine phosph 100.0 3.4E-45 1.2E-49 313.7 19.4 221 1-221 58-322 (324)
12 2j4o_A Mitogen-activated prote 100.0 8.2E-46 2.8E-50 325.3 15.1 224 1-224 67-370 (401)
13 2pnq_A [pyruvate dehydrogenase 100.0 5.2E-44 1.8E-48 318.4 16.4 221 1-221 71-456 (467)
14 2pk0_A Serine/threonine protei 100.0 4.9E-40 1.7E-44 271.8 15.3 201 1-222 39-248 (250)
15 2j82_A TPPHA, protein serine-t 100.0 7E-39 2.4E-43 263.2 15.6 197 1-219 32-240 (240)
16 1txo_A Putative bacterial enzy 100.0 1.8E-38 6.3E-43 260.3 17.1 196 1-220 33-236 (237)
17 3rnr_A Stage II sporulation E 100.0 5.2E-39 1.8E-43 259.2 6.9 188 1-219 15-211 (211)
18 2jfr_A Ser-Thr phosphatase MSP 100.0 1.1E-36 3.7E-41 249.3 17.8 192 1-219 34-233 (234)
19 3t91_A Stage II sporulation pr 99.9 1.7E-23 5.8E-28 171.8 10.5 175 1-225 41-225 (242)
20 3pu9_A Protein serine/threonin 99.9 1.1E-21 3.7E-26 161.0 16.6 172 1-223 44-227 (242)
21 3f79_A Probable two-component 99.8 2.6E-19 9E-24 147.8 14.0 171 1-220 69-253 (255)
22 3zt9_A Serine phosphatase; hyd 99.8 9.5E-18 3.3E-22 132.8 16.3 156 1-218 36-193 (193)
23 3ke6_A Protein RV1364C/MT1410; 99.4 7.4E-12 2.5E-16 109.6 19.1 172 1-222 69-259 (399)
24 3eq2_A Probable two-component 98.8 3.4E-08 1.2E-12 86.0 12.8 133 37-221 248-393 (394)
25 3c4z_A Rhodopsin kinase; Ser/T 72.0 0.25 8.4E-06 44.6 -3.3 80 125-219 44-134 (543)
26 1nbu_A DHNA, probable dihydron 46.8 68 0.0023 22.0 7.2 57 165-224 44-102 (119)
27 2krx_A ASL3597 protein; struct 44.3 67 0.0023 21.3 5.7 58 157-214 8-77 (94)
28 3r2e_A Dihydroneopterin aldola 41.8 77 0.0026 22.7 6.3 56 165-223 67-124 (143)
29 3v9o_A Dihydroneopterin aldola 41.3 95 0.0033 22.2 7.6 55 166-223 66-122 (143)
30 1z9w_A DHNA, dihydroneopterin 39.9 72 0.0025 22.5 5.8 56 165-223 44-101 (133)
31 1b9l_A Protein (epimerase); is 36.9 1E+02 0.0034 21.2 7.2 56 165-223 47-104 (120)
32 3o1k_A Dihydroneopterin aldola 32.2 1.3E+02 0.0045 21.1 6.5 54 165-221 58-113 (132)
33 2o90_A DHNA, dihydroneopterin 28.8 1.4E+02 0.0049 20.4 7.2 56 165-223 43-100 (122)
34 1dhn_A DHNA, 7,8-dihydroneopte 28.0 1.5E+02 0.005 20.3 6.8 57 165-223 44-102 (121)
35 4aey_A D-erythro-7,8-dihydrone 24.7 2E+02 0.0069 20.8 7.0 55 164-218 82-138 (156)
36 3cqb_A Probable protease HTPX 21.4 54 0.0019 22.0 2.3 24 162-185 67-90 (107)
37 1sql_A Dihydroneopterin aldola 20.6 2.4E+02 0.0081 20.1 7.4 56 165-222 63-120 (146)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=9.8e-49 Score=333.22 Aligned_cols=223 Identities=36% Similarity=0.623 Sum_probs=195.8
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCC-------------chhHHHHHHHHHHHHHHHHHhhcCC---CCCCCceEEEE
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHF-------------SAGTRKAVKSAFGKVDHAFADAKSL---DSSSGTTALTA 64 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~-------------~~~~~~~l~~a~~~~~~~i~~~~~~---~~~~gtT~~~~ 64 (253)
|||||||+.+|++|++.+++.+.+...+ ...+.+.|+++|..+|+.+.+.... ...+|||++++
T Consensus 60 V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~ 139 (307)
T 2p8e_A 60 VYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGV 139 (307)
T ss_dssp EEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEE
Confidence 7999999999999999999999763222 2346778999999999999876432 24699999999
Q ss_pred EEECCeEEEEEecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcCeecCceehhhhhccccccCCCCC---C
Q 042247 65 LILGRTMLIANAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDGYLNGQLAVARALGDWHIKGSKGS---S 141 (253)
Q Consensus 65 ~i~~~~l~~a~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~~~~~~~~~tr~lG~~~~k~~~~~---~ 141 (253)
++.++++|++|+||||+|++|+|++.+||+||++.++.|+.||.+.++.+...+.+|.+.+||+||+..+|..... .
T Consensus 140 ~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~ 219 (307)
T 2p8e_A 140 MISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTE 219 (307)
T ss_dssp EECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGG
T ss_pred EEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCC
Confidence 9999999999999999999999999999999999999999999999999998999999999999999998875432 2
Q ss_pred CCcccCCceEEEEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCC
Q 042247 142 CPLSSEPELEELVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCFSP 221 (253)
Q Consensus 142 ~~v~~~p~~~~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~ 221 (253)
+.+.++|++..+.+.++|+|||||||||||+++++|+.+++...+....+++++|+.|++.|+.+|+.||+||||+++.+
T Consensus 220 ~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~ 299 (307)
T 2p8e_A 220 QLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSN 299 (307)
T ss_dssp SSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC--
T ss_pred CeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCC
Confidence 34688999999999999889999999999999999999999887666678999999999999999999999999999976
Q ss_pred CC
Q 042247 222 NP 223 (253)
Q Consensus 222 ~~ 223 (253)
.+
T Consensus 300 ~~ 301 (307)
T 2p8e_A 300 EG 301 (307)
T ss_dssp --
T ss_pred CC
Confidence 54
No 2
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=4.9e-47 Score=330.75 Aligned_cols=224 Identities=32% Similarity=0.587 Sum_probs=198.2
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcC--------CCchhHHHHHHHHHHHHHHHHHhhc---CCCCCCCceEEEEEEECC
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDT--------HFSAGTRKAVKSAFGKVDHAFADAK---SLDSSSGTTALTALILGR 69 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~--------~~~~~~~~~l~~a~~~~~~~i~~~~---~~~~~~gtT~~~~~i~~~ 69 (253)
|||||||+.+|++|++.+++.+.... .....+...|+++|..+|+.+.+.. .....+|||++++++.++
T Consensus 58 V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~ 137 (382)
T 1a6q_A 58 VYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQ 137 (382)
T ss_dssp EEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSS
T ss_pred EEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECC
Confidence 79999999999999999998886421 1234567889999999999988653 223469999999999999
Q ss_pred eEEEEEecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcCeecCceehhhhhccccccCCCCC---CCCccc
Q 042247 70 TMLIANAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDGYLNGQLAVARALGDWHIKGSKGS---SCPLSS 146 (253)
Q Consensus 70 ~l~~a~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~~~~~~~~~tr~lG~~~~k~~~~~---~~~v~~ 146 (253)
++|++|+||||+|++|+|++.+||+||++.++.|+.||+..||.+...+.+|.+.+||+||+..+|..... .+.+.+
T Consensus 138 ~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~ 217 (382)
T 1a6q_A 138 HTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSP 217 (382)
T ss_dssp EEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBC
T ss_pred eEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHhcCcEEecccccCceeeeeecCcHhhcccccCCCccCeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999998875432 234678
Q ss_pred CCceEEEEcC-CCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCC
Q 042247 147 EPELEELVLT-EEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNPP 224 (253)
Q Consensus 147 ~p~~~~~~l~-~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~~ 224 (253)
+|++..+.+. ++|+|||||||||||+++++++.+++...+....+++++|+.|++.|+.+|+.||+|||||+|...++
T Consensus 218 ~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~ 296 (382)
T 1a6q_A 218 EPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPK 296 (382)
T ss_dssp CCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSCC
T ss_pred eeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCcCCEEEEEEEecCCCC
Confidence 9999999998 77789999999999999999999999887666678999999999999999999999999999987664
No 3
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-47 Score=326.34 Aligned_cols=220 Identities=36% Similarity=0.631 Sum_probs=187.0
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHhhc-----------------CCCCCCCceEE
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHF-SAGTRKAVKSAFGKVDHAFADAK-----------------SLDSSSGTTAL 62 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~-~~~~~~~l~~a~~~~~~~i~~~~-----------------~~~~~~gtT~~ 62 (253)
|||||||+.+|++|++.+++.+.+...+ ...+.+.|+++|..+|+.+.+.. .....+|||++
T Consensus 56 V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~ 135 (304)
T 2i0o_A 56 VYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAV 135 (304)
T ss_dssp EEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEE
Confidence 7999999999999999999988764221 23467889999999999886431 12356999999
Q ss_pred EEEEECCeEEEEEecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEE-cCeecCceehhhhhccccccCCCCC-
Q 042247 63 TALILGRTMLIANAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIY-DGYLNGQLAVARALGDWHIKGSKGS- 140 (253)
Q Consensus 63 ~~~i~~~~l~~a~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~-~~~~~~~~~~tr~lG~~~~k~~~~~- 140 (253)
++++.+++++++|+||||+|++|+|++++||+||++.++.|+.||...+|.+. .++.++.+.+||+||+..+|.....
T Consensus 136 ~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~~~k~~~~l~ 215 (304)
T 2i0o_A 136 VALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLP 215 (304)
T ss_dssp EEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECGGGCCCTTSC
T ss_pred EEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHHHHHHHhCCCEEEeCCeEcCceeccccccCHHHccCccCC
Confidence 99999999999999999999999999999999999999999999999999987 6788889999999999998865332
Q ss_pred --CCCcccCCceEEEEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHh------cCCCCC
Q 042247 141 --SCPLSSEPELEELVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQ-HNDPERCSKALVKEALQ------RNTCDN 211 (253)
Q Consensus 141 --~~~v~~~p~~~~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~-~~~~~~~a~~l~~~a~~------~g~~DN 211 (253)
.+.+.++|++..+.+.++|.|||||||||||+++++|+.+++...+.. ..+++++|+.|++.|++ +++.||
T Consensus 216 ~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DN 295 (304)
T 2i0o_A 216 AEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDN 295 (304)
T ss_dssp GGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------C
T ss_pred ccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCC
Confidence 134678999999999999989899999999999999999999887655 57899999999999986 458999
Q ss_pred cEEEEEEcC
Q 042247 212 LTVVVVCFS 220 (253)
Q Consensus 212 ~Tvivv~~~ 220 (253)
+||||++|+
T Consensus 296 iTvivv~~~ 304 (304)
T 2i0o_A 296 MTAIIVQFK 304 (304)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEeC
Confidence 999999974
No 4
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.2e-47 Score=318.34 Aligned_cols=215 Identities=34% Similarity=0.520 Sum_probs=188.6
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcC-----CCCCCCceEEEEEEEC-CeEEEE
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKS-----LDSSSGTTALTALILG-RTMLIA 74 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~-----~~~~~gtT~~~~~i~~-~~l~~a 74 (253)
|||||||+.+|++|++.+.+.+.+.......+.+.|+++|..+|+.+.+... ....+|||++++++.+ .+++++
T Consensus 40 V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~a 119 (274)
T 2iq1_A 40 VYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVA 119 (274)
T ss_dssp EEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEE
Confidence 7999999999999999999888765444456788999999999999986532 2245899999999985 589999
Q ss_pred EecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcC-----eecCceehhhhhccccccCCCCCCCCcccCCc
Q 042247 75 NAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDG-----YLNGQLAVARALGDWHIKGSKGSSCPLSSEPE 149 (253)
Q Consensus 75 ~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~-----~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~ 149 (253)
|+||||+|++|+|++.+||+||++.++.|+.||...+|.+... +.++.+.+||+||+..+|+. ++.++|+
T Consensus 120 nvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~-----~v~~~pd 194 (274)
T 2iq1_A 120 SVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTS-----GVIAEPE 194 (274)
T ss_dssp EESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTT-----TCBCCCE
T ss_pred EecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccC-----CEEeCCE
Confidence 9999999999999999999999999999999999999988753 56788999999999998864 4688999
Q ss_pred eEEEEcCCC-CeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCC
Q 042247 150 LEELVLTEE-DEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNPP 224 (253)
Q Consensus 150 ~~~~~l~~~-d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~~ 224 (253)
+..+++.++ |+|||||||||||+++++|+.+++.. ..+++++|+.|++.|+++|+.||+||||+++.+..+
T Consensus 195 i~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~----~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~~~ 266 (274)
T 2iq1_A 195 TKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ----CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGK 266 (274)
T ss_dssp EEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHT----SSSHHHHHHHHHHHHHHTTCCSCEEEEEEECTTC--
T ss_pred EEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHH----cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCC
Confidence 999999986 56999999999999999999998876 478999999999999999999999999999987654
No 5
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=1.5e-46 Score=323.43 Aligned_cols=218 Identities=33% Similarity=0.507 Sum_probs=189.7
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcC--------------CCchhHHHHHHHHHHHHHHHHHhhcC--------------
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDT--------------HFSAGTRKAVKSAFGKVDHAFADAKS-------------- 52 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~--------------~~~~~~~~~l~~a~~~~~~~i~~~~~-------------- 52 (253)
|||||||+.+|++|++.++..|.+.. .....+...|+++|..+|+.+.....
T Consensus 67 V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~ 146 (337)
T 3qn1_B 67 VYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAV 146 (337)
T ss_dssp EEEEESSSHHHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCS
T ss_pred EEeCCCChhHHHHHHHHHHHHHHHHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhcccccccccccccc
Confidence 79999999999999999988876521 11345778999999999999986541
Q ss_pred CCCCCCceEEEEEEECCeEEEEEecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEc---CeecCceehhhhh
Q 042247 53 LDSSSGTTALTALILGRTMLIANAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYD---GYLNGQLAVARAL 129 (253)
Q Consensus 53 ~~~~~gtT~~~~~i~~~~l~~a~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~---~~~~~~~~~tr~l 129 (253)
....+|||++++++.++++|++|+||||+|++|++++.+||+||++.++.|+.||...+|.+.. .+.++.+.+||+|
T Consensus 147 ~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRal 226 (337)
T 3qn1_B 147 ASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI 226 (337)
T ss_dssp SCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCE
T ss_pred ccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCcccccccc
Confidence 1245999999999999999999999999999999999999999999999999999999999874 6888999999999
Q ss_pred ccccccCCCCCCCCcccCCceEEEEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhc-----------------cCCH
Q 042247 130 GDWHIKGSKGSSCPLSSEPELEELVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQ-----------------HNDP 192 (253)
Q Consensus 130 G~~~~k~~~~~~~~v~~~p~~~~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~-----------------~~~~ 192 (253)
|+..+|+ .+.++|++..+.+.+.++|||||||||||+++++|+.+++...+.. ..++
T Consensus 227 Gd~~~~~------~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (337)
T 3qn1_B 227 GDRYLKP------YVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPAC 300 (337)
T ss_dssp ECGGGTT------TSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHH
T ss_pred ccccccC------CCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhH
Confidence 9998885 4688999999998777779999999999999999999999864321 3457
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCC
Q 042247 193 ERCSKALVKEALQRNTCDNLTVVVVCFSPNPP 224 (253)
Q Consensus 193 ~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~~ 224 (253)
+++|+.|++.|+.+|+.||+|||||+|++.++
T Consensus 301 ~~~a~~Lv~~A~~~g~~DNiTvivv~l~~~~~ 332 (337)
T 3qn1_B 301 QAAADYLSMLALQKGSKDNISIIVIDLKAQRK 332 (337)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEECCSCC-
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEEEEecCCcc
Confidence 89999999999999999999999999987654
No 6
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-46 Score=326.77 Aligned_cols=220 Identities=21% Similarity=0.336 Sum_probs=190.2
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhc----CCCchhHHHHHHHHHHHHHHHHHhhc-------------------------
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVED----THFSAGTRKAVKSAFGKVDHAFADAK------------------------- 51 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~----~~~~~~~~~~l~~a~~~~~~~i~~~~------------------------- 51 (253)
|||||||+.+|++|++.++..+... ......+.+.|+++|..+|+.+.+..
T Consensus 55 V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 134 (358)
T 2irm_A 55 ILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEIS 134 (358)
T ss_dssp EEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC----------
T ss_pred EEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccch
Confidence 7999999999999999999988652 12234678899999999999987521
Q ss_pred -------------CCCCCCCceEEEEEEECCeEEEEEecccceEEEec---C--ceeECCCCCCCCChhHHHHHHHcCCe
Q 042247 52 -------------SLDSSSGTTALTALILGRTMLIANAGDSRAVLGKR---G--RAIELSKDHKPNVTSERLRIEKLGGV 113 (253)
Q Consensus 52 -------------~~~~~~gtT~~~~~i~~~~l~~a~vGDSr~~l~r~---~--~~~~lT~dh~~~~~~e~~ri~~~~~~ 113 (253)
.....+|||++++++.++++|++||||||+|++|+ | ++.+||+||++.++.|+.||...|+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~ 214 (358)
T 2irm_A 135 QQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLM 214 (358)
T ss_dssp -----CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCC
T ss_pred hhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCe
Confidence 01235999999999999999999999999999998 8 99999999999999999999999999
Q ss_pred EEcCeecCceehhhhhccccccCC--------CCCCCCcccCCceE-EEEcCCCCeEEEEEcCCccccCC----------
Q 042247 114 IYDGYLNGQLAVARALGDWHIKGS--------KGSSCPLSSEPELE-ELVLTEEDEYLILGCDGLWDVMS---------- 174 (253)
Q Consensus 114 i~~~~~~~~~~~tr~lG~~~~k~~--------~~~~~~v~~~p~~~-~~~l~~~d~~LvL~SDGv~d~l~---------- 174 (253)
+...+..+.+ +||+||+..+|.. ....+++.++|++. .+.+.++|.|||||||||||+++
T Consensus 215 v~~~r~~g~l-lTRalGd~~~K~~~~~~~~~~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~ 293 (358)
T 2irm_A 215 AQNFEGVPLY-STRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTG 293 (358)
T ss_dssp GGGGTTCTTC-BSBCEECHHHHTTGGGSSSSTTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHH
T ss_pred EeccCcCCEE-cccCCcCHHHhccccccccccccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCcccccccccccc
Confidence 9877777766 9999999887741 11224678999999 49999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHh---------------cC--CCCCcEEEEEEcCC
Q 042247 175 SQCAVTMVRKELMQHNDPERCSKALVKEALQ---------------RN--TCDNLTVVVVCFSP 221 (253)
Q Consensus 175 ~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~---------------~g--~~DN~Tvivv~~~~ 221 (253)
++|+.+++...+....+++++|+.|++.|++ +| +.||+||||++|..
T Consensus 294 ~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 294 NRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp HHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence 8999999998776678999999999999976 46 89999999999864
No 7
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=4.4e-46 Score=318.07 Aligned_cols=216 Identities=34% Similarity=0.569 Sum_probs=186.0
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcC----CC-------chhHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEECC
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDT----HF-------SAGTRKAVKSAFGKVDHAFADAKSLDSSSGTTALTALILGR 69 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~----~~-------~~~~~~~l~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~~~ 69 (253)
|||||||+.+|++|++.+++.+.+.. .. ...+...|.++|..+++.+.... ...+|||++++++.++
T Consensus 57 V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~--~~~~GtT~~~~~i~~~ 134 (316)
T 3kdj_B 57 VYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVA--PETVGSTSVVAVVFPS 134 (316)
T ss_dssp EEEEESSSHHHHHHHHHHHHHHHHHHHHHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTS--CTTCEECEEEEEECSS
T ss_pred EEeCCCcHHHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHHHHhccc--CCCCCCcEEEEEEECC
Confidence 79999999999999999998886521 11 12367789999999999986543 2469999999999999
Q ss_pred eEEEEEecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEc---CeecCceehhhhhccccccCCCCCCCCccc
Q 042247 70 TMLIANAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYD---GYLNGQLAVARALGDWHIKGSKGSSCPLSS 146 (253)
Q Consensus 70 ~l~~a~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~---~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~ 146 (253)
++|++|+||||+|++|+|++.+||+||++.++.|+.|+...++.+.. .+..+.+.+||+||+..+|+ .+.+
T Consensus 135 ~l~vanvGDSR~yl~r~g~~~~lT~DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~------~~~~ 208 (316)
T 3kdj_B 135 HIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP------SIIP 208 (316)
T ss_dssp EEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTT------TSBC
T ss_pred EEEEEEccCCEEEEEECCEecccCCCCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCC------CcCC
Confidence 99999999999999999999999999999999999999999998863 58889999999999998886 4688
Q ss_pred CCceEEEEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHh-----------------------ccCCHHHHHHHHHHHH
Q 042247 147 EPELEELVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELM-----------------------QHNDPERCSKALVKEA 203 (253)
Q Consensus 147 ~p~~~~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~-----------------------~~~~~~~~a~~l~~~a 203 (253)
+|++..+.+.+.++|||||||||||+++++|+.+++...+. ...+++.+|+.|++.|
T Consensus 209 ~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A 288 (316)
T 3kdj_B 209 DPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLA 288 (316)
T ss_dssp CCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHH
Confidence 99999999666666999999999999999999999976321 1235789999999999
Q ss_pred HhcCCCCCcEEEEEEcCCCCC
Q 042247 204 LQRNTCDNLTVVVVCFSPNPP 224 (253)
Q Consensus 204 ~~~g~~DN~Tvivv~~~~~~~ 224 (253)
+.+|+.||+|||||++.+.+.
T Consensus 289 ~~~g~~DNiTvivv~l~~~~~ 309 (316)
T 3kdj_B 289 IQRGSKDNISVVVVDLKPRRK 309 (316)
T ss_dssp HHTTCCSCEEEEEEECSCC--
T ss_pred HHcCCCCCeEEEEEEccCCCc
Confidence 999999999999999987654
No 8
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=1.9e-45 Score=322.07 Aligned_cols=215 Identities=35% Similarity=0.527 Sum_probs=190.7
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcCC-----CCCCCceEEEEEEECC-eEEEE
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKSL-----DSSSGTTALTALILGR-TMLIA 74 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~-----~~~~gtT~~~~~i~~~-~l~~a 74 (253)
|||||||+.+|++|++.+...+.+.......+...|+++|..+++.+.+.... ...+|||++++++.++ +++++
T Consensus 154 VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~va 233 (389)
T 4da1_A 154 VYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVA 233 (389)
T ss_dssp EEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEE
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEE
Confidence 79999999999999999999887755555667889999999999999865322 2348999999999876 89999
Q ss_pred EecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEc-----CeecCceehhhhhccccccCCCCCCCCcccCCc
Q 042247 75 NAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYD-----GYLNGQLAVARALGDWHIKGSKGSSCPLSSEPE 149 (253)
Q Consensus 75 ~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~-----~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~ 149 (253)
|+||||+|++|+|++.+||+||++.++.|+.|+...||.+.. .+.++.+.+||+||+..+|+. ++.++|+
T Consensus 234 nvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~-----~v~~~pd 308 (389)
T 4da1_A 234 SVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTS-----GVIAEPE 308 (389)
T ss_dssp EESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGG-----TCBCCCE
T ss_pred EeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccC-----CCCCCCc
Confidence 999999999999999999999999999999999999998874 477889999999999998864 4688999
Q ss_pred eEEEEcCCC-CeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCC
Q 042247 150 LEELVLTEE-DEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNPP 224 (253)
Q Consensus 150 ~~~~~l~~~-d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~~ 224 (253)
+..+.+.++ |+|||||||||||+++++++.+++.. ..+++++|+.|++.|+++|+.||+||||++|.....
T Consensus 309 i~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~----~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~ 380 (389)
T 4da1_A 309 TKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ----CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGK 380 (389)
T ss_dssp EEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHH----SSSHHHHHHHHHHHHHHHTCCSCEEEEEEEECCC--
T ss_pred eEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHh----cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCC
Confidence 999999865 67999999999999999999999976 478999999999999999999999999999987653
No 9
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=5.6e-45 Score=317.08 Aligned_cols=217 Identities=24% Similarity=0.383 Sum_probs=185.8
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEE-------------
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKSLDSSSGTTALTALIL------------- 67 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~------------- 67 (253)
|||||||+.+|++|++.++..+.+... .+.+.|+++|.++|+.+..... .+|||++++++.
T Consensus 53 V~DGhGG~~aa~~as~~l~~~l~~~~~---~~~~al~~af~~~d~~l~~~~~---~~GtTa~~~~i~~~~~~~~~~~~g~ 126 (377)
T 3d8k_A 53 MFDGFQGRHSAMWLAQNVMNYLNDLRD---VNEEEITRQFERMDGDLRAANL---PGGSSALIIFVRYEKKPTEARVVGR 126 (377)
T ss_dssp EEEBSSSSHHHHHHHHHHHHHHTTCSS---SSHHHHHHHHHHHHHHHHHHTC---CCCBCEEEEEEEEESSCCCEEEETT
T ss_pred EEcCCCcHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHhccc---CCCCceEEEEEeccccccccccccc
Confidence 799999999999999999999965332 3467899999999999987754 489999998885
Q ss_pred --------------------------------------CCeEEEEEecccceEEEecCceeECCCCCCCCChhHHHHHHH
Q 042247 68 --------------------------------------GRTMLIANAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEK 109 (253)
Q Consensus 68 --------------------------------------~~~l~~a~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~ 109 (253)
++++|++|+||||+|++|+|++.+||+||++.++.|+.||..
T Consensus 127 ~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~ 206 (377)
T 3d8k_A 127 QIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQA 206 (377)
T ss_dssp EEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHT
T ss_pred cccccccccccccccccccccccceeeecccccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHH
Confidence 148999999999999999999999999999999999999999
Q ss_pred cCCeEE--cC--eecCceehhhhhccccccCCCC---CCCCcccCCceEEEEcCCCCeEEEEEcCCccccCCHHHHHHHH
Q 042247 110 LGGVIY--DG--YLNGQLAVARALGDWHIKGSKG---SSCPLSSEPELEELVLTEEDEYLILGCDGLWDVMSSQCAVTMV 182 (253)
Q Consensus 110 ~~~~i~--~~--~~~~~~~~tr~lG~~~~k~~~~---~~~~v~~~p~~~~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~ 182 (253)
.++.+. .+ +..|.+++||+||+..+|.... ..+.+.++|++..+.+.++| +||||||||||+++++|+.+.+
T Consensus 207 ~gg~v~~~~g~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e~v~~v 285 (377)
T 3d8k_A 207 AGGVFTTVNGELLLGGVVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAA 285 (377)
T ss_dssp TTCCEEECSSSEEETTTBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHHHHHHH
T ss_pred cCCEEEecCCcEEEcCceecceeecChhhhcccccccccCccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHHHHHHH
Confidence 999886 34 7788899999999999886432 23457889999999999988 7899999999999999987755
Q ss_pred HHHHh-ccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCC
Q 042247 183 RKELM-QHNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNPP 224 (253)
Q Consensus 183 ~~~~~-~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~~ 224 (253)
...+. ...+++++|+.|++.|+++|+.||+|||||++...+.
T Consensus 286 ~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~ 328 (377)
T 3d8k_A 286 IALYPVSPETVLDAAKAMVVNAKRRKVTKNISTFVRHLPESRT 328 (377)
T ss_dssp HTTSCCCGGGHHHHHHHHHHTTTTSSCCSCCCEEEEECCSSCC
T ss_pred HHHhhccCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEecCCcc
Confidence 43221 2457999999999999999999999999999976654
No 10
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-44 Score=313.21 Aligned_cols=219 Identities=28% Similarity=0.406 Sum_probs=186.7
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEEC------------
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKSLDSSSGTTALTALILG------------ 68 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~~------------ 68 (253)
|||||||..+|+++++.+...+.+...+. ...|+++|..+|+.+.+.......+|||++++++..
T Consensus 48 VfDGHGG~~as~~a~~~l~~~l~~~~~~~---~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~ 124 (364)
T 2isn_A 48 VFDGHAGEATSQYCAKHAAKHLGKLSEFT---FAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGR 124 (364)
T ss_dssp EEEEESCSHHHHHHHHHHHHHHTTCSSCC---HHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETT
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHhhccc---HHHHHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccc
Confidence 79999999999999999999886543332 467899999999999876655567999999998852
Q ss_pred ------------------------------------------------CeEEEEEecccceEEE-ecCceeECCCCCCCC
Q 042247 69 ------------------------------------------------RTMLIANAGDSRAVLG-KRGRAIELSKDHKPN 99 (253)
Q Consensus 69 ------------------------------------------------~~l~~a~vGDSr~~l~-r~~~~~~lT~dh~~~ 99 (253)
.++|++|+||||+|++ |+|++.+||+||++.
T Consensus 125 ~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~ 204 (364)
T 2isn_A 125 EIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPN 204 (364)
T ss_dssp EECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTT
T ss_pred cccccccccchhhhhhhhhhhhhcccccccccccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCC
Confidence 3799999999999999 789999999999999
Q ss_pred ChhHHHHHHHcCCeEEcC---eecCceehhhhhccccccCCCCC---CCCcccCCceEEEEcCCCCeEEEEEcCCccccC
Q 042247 100 VTSERLRIEKLGGVIYDG---YLNGQLAVARALGDWHIKGSKGS---SCPLSSEPELEELVLTEEDEYLILGCDGLWDVM 173 (253)
Q Consensus 100 ~~~e~~ri~~~~~~i~~~---~~~~~~~~tr~lG~~~~k~~~~~---~~~v~~~p~~~~~~l~~~d~~LvL~SDGv~d~l 173 (253)
++.|+.||...+|.+... +..+.+.+||+||+..+|..... .+.+.++|++..+.+.++| |||||||||||++
T Consensus 205 ~~~e~~rI~~~gG~v~~~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l 283 (364)
T 2isn_A 205 HPTEASRIEKAGGSVETFDVPRVDGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPS 283 (364)
T ss_dssp SHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSS
T ss_pred CHHHHHHHHHcCCeEecCCCcccCCceeeEEEecchhhccccccCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCC
Confidence 999999999999988754 55778889999999998854321 2356789999999999988 9999999999997
Q ss_pred C--HHHHHHHHHHHH-hccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 042247 174 S--SQCAVTMVRKEL-MQHNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNP 223 (253)
Q Consensus 174 ~--~~ei~~~~~~~~-~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~ 223 (253)
+ ++++.+++...+ ....+++++|+.|++.|+.+|+.||+|||||+|.+.+
T Consensus 284 ~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~ 336 (364)
T 2isn_A 284 GMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYDMNSQDNISVMLVAFHNQE 336 (364)
T ss_dssp SCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSC
T ss_pred CCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEcCCCC
Confidence 6 788887765433 4456899999999999999999999999999997654
No 11
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-45 Score=313.70 Aligned_cols=221 Identities=25% Similarity=0.421 Sum_probs=183.5
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCC--------------------chhHHHHHHHHHHHHHHHHHhhcCC--CCCCC
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHF--------------------SAGTRKAVKSAFGKVDHAFADAKSL--DSSSG 58 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~--------------------~~~~~~~l~~a~~~~~~~i~~~~~~--~~~~g 58 (253)
|||||||+.+|++|++.+++.+.+...+ ...+.+.|+++|..+|+.+.+.... ....|
T Consensus 58 V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g 137 (324)
T 2i44_A 58 VFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYAS 137 (324)
T ss_dssp EEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCE
T ss_pred EeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Confidence 7999999999999999999888653111 2245678999999999999865321 12234
Q ss_pred ceEEEEEEECCeEEEEEecccceEEEec---C-ceeECCCCCCCCChhHHHHHHHcCCeEEc--------CeecCceehh
Q 042247 59 TTALTALILGRTMLIANAGDSRAVLGKR---G-RAIELSKDHKPNVTSERLRIEKLGGVIYD--------GYLNGQLAVA 126 (253)
Q Consensus 59 tT~~~~~i~~~~l~~a~vGDSr~~l~r~---~-~~~~lT~dh~~~~~~e~~ri~~~~~~i~~--------~~~~~~~~~t 126 (253)
+|.+++++.++++|++|+||||+|++|+ | ++.+||+||++.++.|+.||...||.+.. .+..|.++++
T Consensus 138 ~gtt~~~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~s 217 (324)
T 2i44_A 138 STSVTAVLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFR 217 (324)
T ss_dssp ECEEEEEEETTEEEEEEESSCEEEEEEEETTEEEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHH
T ss_pred CCeEEEEEECCeEEEEEccCceEEEEeccCCCceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccch
Confidence 4444455899999999999999999997 7 89999999999999999999999999842 1356788999
Q ss_pred hhhcc----ccccCCCC----CCCCcccCCceEEEEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHH--HH
Q 042247 127 RALGD----WHIKGSKG----SSCPLSSEPELEELVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPER--CS 196 (253)
Q Consensus 127 r~lG~----~~~k~~~~----~~~~v~~~p~~~~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~--~a 196 (253)
|++|+ ..+|+..+ ..+++.++|++..+.+.++|+|||||||||||+++++|+.+++...+....++++ +|
T Consensus 218 ra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a 297 (324)
T 2i44_A 218 KSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVE 297 (324)
T ss_dssp HHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hhcCCccccceeccccCCccccCCeEeecCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 99999 56654321 2346789999999999999889999999999999999999999887666678999 99
Q ss_pred HHHHHHHHhcCCCCCcEEEEEEcCC
Q 042247 197 KALVKEALQRNTCDNLTVVVVCFSP 221 (253)
Q Consensus 197 ~~l~~~a~~~g~~DN~Tvivv~~~~ 221 (253)
+.|++.|+.+|+.||+||||+++.+
T Consensus 298 ~~L~~~A~~~g~~DNiTvivv~~~~ 322 (324)
T 2i44_A 298 MTLAEQQSRNQSADNITAMTVFFKK 322 (324)
T ss_dssp HHHHHHHHTTCCCCCEEEEEEEEC-
T ss_pred HHHHHHHHhcCCCCCCEEEEEEeeC
Confidence 9999999999999999999999975
No 12
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=8.2e-46 Score=325.27 Aligned_cols=224 Identities=24% Similarity=0.388 Sum_probs=190.0
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcC----CCchhHHHHHHHHHHHHHHHHHhhcC------------------------
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDT----HFSAGTRKAVKSAFGKVDHAFADAKS------------------------ 52 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~----~~~~~~~~~l~~a~~~~~~~i~~~~~------------------------ 52 (253)
|||||||+.+|++|++.++..|.+.. .....+.+.|+++|..+++.+.+...
T Consensus 67 V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 146 (401)
T 2j4o_A 67 VFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPP 146 (401)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSSSSCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCG
T ss_pred EEcCCCCHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccc
Confidence 79999999999999999998886421 12346778899999999888765210
Q ss_pred -------------CCCCCCceEEEEEEECCeEEEEEecccceEEEecC----ceeECCCCCCCCChhHHHHHHHcCCeEE
Q 042247 53 -------------LDSSSGTTALTALILGRTMLIANAGDSRAVLGKRG----RAIELSKDHKPNVTSERLRIEKLGGVIY 115 (253)
Q Consensus 53 -------------~~~~~gtT~~~~~i~~~~l~~a~vGDSr~~l~r~~----~~~~lT~dh~~~~~~e~~ri~~~~~~i~ 115 (253)
....+|||++++++.++++|++||||||+|++|++ ++.+||.||++.++.|+.||...|+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~ 226 (401)
T 2j4o_A 147 QYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAG 226 (401)
T ss_dssp GGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHH
T ss_pred ccchhhhhhhcccccCCCccCEEEEEEECCEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCee
Confidence 01258999999999999999999999999999998 9999999999999999999999998753
Q ss_pred ---cCeecCceehhhhhccccccCC--------CCCCCCcccCCceEE-EEcCCCCeEEEEEcCCccccC--------CH
Q 042247 116 ---DGYLNGQLAVARALGDWHIKGS--------KGSSCPLSSEPELEE-LVLTEEDEYLILGCDGLWDVM--------SS 175 (253)
Q Consensus 116 ---~~~~~~~~~~tr~lG~~~~k~~--------~~~~~~v~~~p~~~~-~~l~~~d~~LvL~SDGv~d~l--------~~ 175 (253)
..+..|.+.+||+||+..+|.+ ....+++.++|++.. +.+.++|+|||||||||||++ ++
T Consensus 227 ~~~~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~ 306 (401)
T 2j4o_A 227 KIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQAN 306 (401)
T ss_dssp HHHHHCCBTTBCCSBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHH
T ss_pred eccCccccCCcccccccCCHhhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCH
Confidence 3466777899999999988742 122346789999996 999999999999999999999 89
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHh-------cCC--------CCCcEEEEEEcCCCCC
Q 042247 176 QCAVTMVRKELMQHNDPERCSKALVKEALQ-------RNT--------CDNLTVVVVCFSPNPP 224 (253)
Q Consensus 176 ~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~-------~g~--------~DN~Tvivv~~~~~~~ 224 (253)
+|+.+++...+....+++.+|+.|++.|++ +|+ .||||||||+|....+
T Consensus 307 ~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~~~ 370 (401)
T 2j4o_A 307 QEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPLG 370 (401)
T ss_dssp HHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCCCC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCCCc
Confidence 999999998776678999999999999976 665 8999999999986543
No 13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=5.2e-44 Score=318.36 Aligned_cols=221 Identities=32% Similarity=0.492 Sum_probs=181.8
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhc------------------------------CCC----------------------
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVED------------------------------THF---------------------- 28 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~------------------------------~~~---------------------- 28 (253)
|||||||+.+|++|++.++..+... ..+
T Consensus 71 VfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 150 (467)
T 2pnq_A 71 VFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELID 150 (467)
T ss_dssp EEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccccccccccccccccccchhhhhhhhhcchhhhhhhhcc
Confidence 7999999999999999998877531 000
Q ss_pred ------c-hhHHHHHHHHHHHHHHHHHhhcCC-------------CCCCCceEEEEEEECCeEEEEEecccceEEEec--
Q 042247 29 ------S-AGTRKAVKSAFGKVDHAFADAKSL-------------DSSSGTTALTALILGRTMLIANAGDSRAVLGKR-- 86 (253)
Q Consensus 29 ------~-~~~~~~l~~a~~~~~~~i~~~~~~-------------~~~~gtT~~~~~i~~~~l~~a~vGDSr~~l~r~-- 86 (253)
. ..+.++|+++|..+|+.|...... ...+|||++++++.++++|+||+||||+|+++.
T Consensus 151 ~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~ 230 (467)
T 2pnq_A 151 LNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEE 230 (467)
T ss_dssp C------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECT
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecC
Confidence 0 146788999999999998764321 134899999999999999999999999999994
Q ss_pred -C--ceeECCCCCCCCChhHHHHHHHcCC------eEEcCeecCceehhhhhccccccCCC-------------------
Q 042247 87 -G--RAIELSKDHKPNVTSERLRIEKLGG------VIYDGYLNGQLAVARALGDWHIKGSK------------------- 138 (253)
Q Consensus 87 -~--~~~~lT~dh~~~~~~e~~ri~~~~~------~i~~~~~~~~~~~tr~lG~~~~k~~~------------------- 138 (253)
| .+.+||.||++.++.|+.||...|+ .+..++..|.+.+|||||+..+|.+.
T Consensus 231 ~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~ 310 (467)
T 2pnq_A 231 DGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEY 310 (467)
T ss_dssp TSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-------
T ss_pred CCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccccchhcCchhhcccchhhhhhhcccccccccccc
Confidence 7 7999999999999999999999874 34467888899999999999888531
Q ss_pred --------CCCCCcccCCceEEEEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccC--CH----------------
Q 042247 139 --------GSSCPLSSEPELEELVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHN--DP---------------- 192 (253)
Q Consensus 139 --------~~~~~v~~~p~~~~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~--~~---------------- 192 (253)
..++.+.++|++..+.+.++|.|||||||||||+++++|+++++...+.... +|
T Consensus 311 ~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 390 (467)
T 2pnq_A 311 TKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGL 390 (467)
T ss_dssp ----CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC-----------------
T ss_pred cccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHH
Confidence 1234578999999999999999999999999999999999999988763211 22
Q ss_pred --------------HHHHHHHHHHHHhcC-----------------------CCCCcEEEEEEcCC
Q 042247 193 --------------ERCSKALVKEALQRN-----------------------TCDNLTVVVVCFSP 221 (253)
Q Consensus 193 --------------~~~a~~l~~~a~~~g-----------------------~~DN~Tvivv~~~~ 221 (253)
+.+|..|++.|+..+ ..||||||||+|..
T Consensus 391 l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 391 LTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp --------------CCHHHHHHHHHHC-------------------------CCSCEEEEEEEECH
T ss_pred HHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence 567899999999875 38999999999963
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=4.9e-40 Score=271.75 Aligned_cols=201 Identities=23% Similarity=0.314 Sum_probs=166.3
Q ss_pred CccCCCchHHHHHHHHHHHHHHH-hc--CCC--chhHHHHHHHHHHHHHHHHHhhcCC--CCCCCceEEEEEEECCeEEE
Q 042247 1 VFDGHGGIDAASFTKNNILGFIV-ED--THF--SAGTRKAVKSAFGKVDHAFADAKSL--DSSSGTTALTALILGRTMLI 73 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~-~~--~~~--~~~~~~~l~~a~~~~~~~i~~~~~~--~~~~gtT~~~~~i~~~~l~~ 73 (253)
|||||||+.+|+++++.+++.+. +. ... ...+...|.++|..+|+.+.+.... ...+|||++++++.++++++
T Consensus 39 V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~ 118 (250)
T 2pk0_A 39 LADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIF 118 (250)
T ss_dssp EEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEE
T ss_pred EEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEE
Confidence 79999999999999999988886 31 122 4456778999999999998865432 24589999999999999999
Q ss_pred EEecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEc--CeecCceehhhhhccccccCCCCCCCCcccCCceE
Q 042247 74 ANAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYD--GYLNGQLAVARALGDWHIKGSKGSSCPLSSEPELE 151 (253)
Q Consensus 74 a~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~--~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~ 151 (253)
+|+||||+|++|+|++.+||.||++.++. ...|..... ..+++++.+||+||+.. ..+|++.
T Consensus 119 anvGDsr~~l~r~g~~~~lt~dh~~~~~~-----~~~g~i~~~~~~~~~~~~~ltralG~~~-----------~~~p~~~ 182 (250)
T 2pk0_A 119 AHVGDSRIGIVRQGEYHLLTSDHSLVNEL-----VKAGQLTEEEAASHPQKNIITQSIGQAN-----------PVEPDLG 182 (250)
T ss_dssp EEESSCEEEEEETTEEEECCCCCBHHHHH-----HHTTSSCHHHHHTCCSCCCBSCCBSCSS-----------CCCCEEE
T ss_pred EEeCCCeEEEEcCCcEEEeCCCCCHHHHH-----HHcCCCCHHHHHhCCCcceEEeecCCCC-----------CccceEE
Confidence 99999999999999999999999975432 223322111 13457788999999854 6789999
Q ss_pred EEEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCC
Q 042247 152 ELVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCFSPN 222 (253)
Q Consensus 152 ~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~ 222 (253)
.+.+.++| +||||||||||+++++++.+++.. ..+++++++.|++.|+++++.||+|+||+++...
T Consensus 183 ~~~l~~gd-~lll~SDGl~d~l~~~~i~~~~~~----~~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~~ 248 (250)
T 2pk0_A 183 VHLLEEGD-YLVVNSDGLTNMLSNADIATVLTQ----EKTLDDKNQDLITLANHRGGLDNITVALVYVESE 248 (250)
T ss_dssp EEECCTTC-EEEEECHHHHTTSCHHHHHHHHTS----SSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECC-
T ss_pred EEEcCCCC-EEEEECCCCCCCcCHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeCC
Confidence 99999988 788999999999999998888765 4689999999999999999999999999999754
No 15
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=7e-39 Score=263.25 Aligned_cols=197 Identities=23% Similarity=0.314 Sum_probs=154.4
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCC--C---chhHHHHHHHHHHHHHHHHHhhcCCC---CCCCceEEEEEEE--CCe
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTH--F---SAGTRKAVKSAFGKVDHAFADAKSLD---SSSGTTALTALIL--GRT 70 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~--~---~~~~~~~l~~a~~~~~~~i~~~~~~~---~~~gtT~~~~~i~--~~~ 70 (253)
|||||||+.+|+++++.+.+.+.+... . ...+.+.|.++|..+|+.+.+..... ..+|||++++++. +++
T Consensus 32 V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~ 111 (240)
T 2j82_A 32 VADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDR 111 (240)
T ss_dssp EEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSE
T ss_pred EEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCE
Confidence 799999999888888888777754211 0 23467789999999999998765433 4589999999999 999
Q ss_pred EEEEEecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEc--CeecCceehhhhhccccccCCCCCCCCcccCC
Q 042247 71 MLIANAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYD--GYLNGQLAVARALGDWHIKGSKGSSCPLSSEP 148 (253)
Q Consensus 71 l~~a~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~--~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p 148 (253)
++++|+||||+|++|++++.+||.||++.++.+ ..|+.... ..+++++.+||+||+.. ..+|
T Consensus 112 l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~~-----~~g~i~~~~~~~~~~~~~ltralG~~~-----------~~~p 175 (240)
T 2j82_A 112 AWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAV-----QLGSLTIEQARQHPWRHVLSQCLGRED-----------LSQI 175 (240)
T ss_dssp EEEEEESSCEEEEEETTEEEECSCCCBHHHHC---------------------CCCBSCCBSCTT-----------CCCC
T ss_pred EEEEEEccCceEEEeCCEEEEECCCCcHHHHHH-----HcCCCCHHHHhcCCCcCeEeecCCCCC-----------ceeE
Confidence 999999999999999999999999999754322 22222111 13466778999999853 6789
Q ss_pred ceEEEEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEc
Q 042247 149 ELEELVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCF 219 (253)
Q Consensus 149 ~~~~~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~ 219 (253)
++..+.+.++| +||||||||||+++++++.+++. ..+++++++.|++.|+.+++.||+|+|++++
T Consensus 176 ~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~l~-----~~~~~~~a~~l~~~a~~~g~~DniTvivv~~ 240 (240)
T 2j82_A 176 DIQPIDLEPGD-RLLLCSDGLTEELTDDVISIYLS-----EPNVQKAAAALVDAAKTHGGRDNVTVVVISV 240 (240)
T ss_dssp EEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHT-----CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred EEEEEeeCCCC-EEEEECCCCCCCCCHHHHHHHHc-----cCCHHHHHHHHHHHHHHcCCCCCeEEEEEeC
Confidence 99999999998 68899999999999999988876 4789999999999999999999999999975
No 16
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=1.8e-38 Score=260.33 Aligned_cols=196 Identities=23% Similarity=0.258 Sum_probs=161.2
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCC--CchhHHHHHHHHHHHHHHHHHhhcCC---CCCCCceEEEEEEECCeEEEEE
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTH--FSAGTRKAVKSAFGKVDHAFADAKSL---DSSSGTTALTALILGRTMLIAN 75 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~--~~~~~~~~l~~a~~~~~~~i~~~~~~---~~~~gtT~~~~~i~~~~l~~a~ 75 (253)
|||||||+.+|+++++.+++.+.+... ....+.+.|.++|..+++.+.+.... ...+|||++++++.+++++++|
T Consensus 33 V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~ 112 (237)
T 1txo_A 33 LADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVH 112 (237)
T ss_dssp EEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEE
T ss_pred EEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEE
Confidence 799999999999999999998866322 22357788999999999998864322 2458999999999999999999
Q ss_pred ecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcC---eecCceehhhhhccccccCCCCCCCCcccCCceEE
Q 042247 76 AGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDG---YLNGQLAVARALGDWHIKGSKGSSCPLSSEPELEE 152 (253)
Q Consensus 76 vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~---~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~~ 152 (253)
+||||+|++|+|++.+||.||++.+ ++...| .+... ..+.+..+||++|+ ...+|++..
T Consensus 113 vGDsr~~l~r~g~~~~lt~dh~~~~-----~~~~~G-~i~~~~~~~~~~~~~~tr~lg~------------~~~~p~~~~ 174 (237)
T 1txo_A 113 IGDSRGYLLRDGELTQITKDDTFVQ-----TLVDEG-RITPEEAHSHPQRSLIMRALTG------------HEVEPTLTM 174 (237)
T ss_dssp ESSCEEEEEETTEEEECSCCCBHHH-----HHHHTT-SSCTTGGGGCTTTTCBCCCBSS------------SCCCCEEEE
T ss_pred EccCcEEEEeCCEeEEeCCCCCHHH-----HHHHcC-CCCHHHHhhCccccceeeccCC------------CCccceEEE
Confidence 9999999999999999999998643 233333 22211 23345568999985 256899999
Q ss_pred EEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcC
Q 042247 153 LVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCFS 220 (253)
Q Consensus 153 ~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~ 220 (253)
+.+.++| +||||||||||+++++++.+++.. .+++++|+.|++.|+.+|+.||+||||+++.
T Consensus 175 ~~l~~~d-~lvl~SDGl~d~l~~~~i~~~~~~-----~~~~~~a~~L~~~a~~~g~~DniTvivv~~~ 236 (237)
T 1txo_A 175 REARAGD-RYLLCSDGLSDPVSDETILEALQI-----PEVAESAHRLIELALRGGGPDNVTVVVADLE 236 (237)
T ss_dssp EECCTTC-EEEEECHHHHTTSCHHHHHHHHTS-----SSHHHHHHHHHHHHHHTTCCSCEEEEEEEEE
T ss_pred EecCCCC-EEEEECCCCCCCCCHHHHHHHHhc-----CCHHHHHHHHHHHHHHcCCCCCeEEEEEEee
Confidence 9999998 567999999999999999988853 5899999999999999999999999999985
No 17
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=5.2e-39 Score=259.20 Aligned_cols=188 Identities=21% Similarity=0.200 Sum_probs=142.9
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhc---CCCCCCCceEEEEEEE--CCeEEEEE
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAK---SLDSSSGTTALTALIL--GRTMLIAN 75 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~---~~~~~~gtT~~~~~i~--~~~l~~a~ 75 (253)
|||||||+..|++|++.+++.+.+....... +.+++..+|+.+.+.. .....+|||++++++. +++++++|
T Consensus 15 VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~----~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~~~~~~an 90 (211)
T 3rnr_A 15 VVDGMGGMIRGDEAAQRALSASVGVLDAGGS----PLDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLEWAS 90 (211)
T ss_dssp EEEECTTSTTHHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTTTEEEEEE
T ss_pred EEeCCcCcHHHHHHHHHHHHHHHHHHhccCC----HHHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCCCEEEEEE
Confidence 7999999999999998888887652211112 2467777777776543 2234699999999999 99999999
Q ss_pred ecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcCeecCceehhhhhccccccCCCCCCCCcccCCce--EEE
Q 042247 76 AGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDGYLNGQLAVARALGDWHIKGSKGSSCPLSSEPEL--EEL 153 (253)
Q Consensus 76 vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~--~~~ 153 (253)
+||||+|++|++++.+||+||++.+. +...|. ....++.+..+||++|... ..+|++ ..+
T Consensus 91 vGDSr~yl~r~g~~~~lt~dh~~~~~-----~~~~g~--~~~~~~~~~~ltralG~~~-----------~~~~~~~~~~~ 152 (211)
T 3rnr_A 91 VGDCRVYLFKGGRLSRLSLDHNVSSE-----MVLLGR--GPVPGPAGEMITSFIGIEN-----------LTEISTSEAPL 152 (211)
T ss_dssp ESSCEEEEEETTEEEECCCCCBHHHH-----HHHTTS--CCCCSHHHHCBSCCBTCSS-----------CCCCEECSSCE
T ss_pred EccCeEEEEeCCEEEEECCCcHHHHH-----HHHcCC--ChhhCCCccEEecccCCCC-----------CcceeEeccee
Confidence 99999999999999999999997433 223333 2244555667899999743 567888 789
Q ss_pred EcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcC--CCCCcEEEEEEc
Q 042247 154 VLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRN--TCDNLTVVVVCF 219 (253)
Q Consensus 154 ~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g--~~DN~Tvivv~~ 219 (253)
.+.++| +||||||||||+++++++.+++.. ..+ ++.|++.|++++ +.||+|+||+++
T Consensus 153 ~l~~gd-~llL~SDGl~d~~~~~~i~~~l~~----~~~----a~~L~~~a~~~g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 153 PLEAGE-GVLVVSDGVYRSLHEDRIAMALSR----GSD----ARGILQEVEAQGRPYQDNATLALVIL 211 (211)
T ss_dssp ECCTTC-EEEEEEC-----CCTTEEEEEECT----TSC----HHHHHHHHHHSCTTSCSSCEEEEEEC
T ss_pred cCCCCC-EEEEEcCCCCCCcCHHHHHHHHhc----CCh----HHHHHHHHHHcCCCCCCceEEEEEeC
Confidence 999998 567999999999999998887754 222 889999999999 999999999985
No 18
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=1.1e-36 Score=249.34 Aligned_cols=192 Identities=22% Similarity=0.278 Sum_probs=156.5
Q ss_pred CccCCCch--HHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcCCCC-CCCceEEEEEEECCe---EEEE
Q 042247 1 VFDGHGGI--DAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKSLDS-SSGTTALTALILGRT---MLIA 74 (253)
Q Consensus 1 V~DG~GG~--~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~-~~gtT~~~~~i~~~~---l~~a 74 (253)
|||||||+ .+|+++.+.+...+.... + .+.+.++|..+|+.+.+...... .+|||++++++.+++ ++++
T Consensus 34 V~DG~Gg~G~~as~~~~~~l~~~~~~~~----~-~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~a 108 (234)
T 2jfr_A 34 VADGFGARGHHASATALKTLSAGFAAAP----D-RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVV 108 (234)
T ss_dssp EEEEESTTHHHHHHHHHHHHHHHHHHSC----S-HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEE
T ss_pred EEeCCCccHHHHHHHHHHHHHHHHhcCC----c-HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEE
Confidence 79999976 666677777666654431 1 57899999999999987654332 289999999999988 9999
Q ss_pred EecccceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEc--CeecCceehhhhhccccccCCCCCCCCcccCCceEE
Q 042247 75 NAGDSRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYD--GYLNGQLAVARALGDWHIKGSKGSSCPLSSEPELEE 152 (253)
Q Consensus 75 ~vGDSr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~--~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~~ 152 (253)
|+||||+|++|++++.+||+||++.+. +...|..... ...++.+.+||+||+.. ..+|++..
T Consensus 109 nvGDsr~~l~r~g~~~~lt~dh~~~~~-----~~~~g~i~~~~~~~~~~~~~~tralG~~~-----------~~~~~~~~ 172 (234)
T 2jfr_A 109 NIGDSPLYRIRDGHMEQLTDDHSVAGE-----LVRMGEITRHEARWHPQRHLLTRALGIGP-----------HIGPDVFG 172 (234)
T ss_dssp EESSCCEEEEETTEEEECSCCCBHHHH-----HHHTTSSCHHHHTTCTTTTCBSCCBSSSS-----------CCCCEEEE
T ss_pred EEccCceEEEECCEEEEeCCCCCHHHH-----HHHcCCCCHHHHhcCcccceeeecCcCCC-----------CceeEEEE
Confidence 999999999999999999999997432 2233322111 23456778999999853 67899999
Q ss_pred EEcCCCCeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEc
Q 042247 153 LVLTEEDEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCF 219 (253)
Q Consensus 153 ~~l~~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~ 219 (253)
+.+.++| +||||||||||+++++++.+++ . ..+++++++.|++.|+.+++.||+|+|++++
T Consensus 173 ~~l~~gd-~lll~SDGl~d~~~~~~i~~~~-~----~~~~~~~a~~l~~~a~~~g~~DniTvivv~~ 233 (234)
T 2jfr_A 173 IDCGPGD-RLLISSDGLFAAADEALIVDAA-T----SPDPQVAVRRLVEVANDAGGSDNTTVVVIDL 233 (234)
T ss_dssp CCCCTTC-EEEEECGGGGTTSCHHHHHHHH-T----CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred EecCCCC-EEEEECCCCccccCHHHHHHHH-c----cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEe
Confidence 9999988 6789999999999999998888 4 5789999999999999999999999999987
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.89 E-value=1.7e-23 Score=171.75 Aligned_cols=175 Identities=18% Similarity=0.264 Sum_probs=118.8
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEE--CCeEEEEEecc
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKSLDSSSGTTALTALIL--GRTMLIANAGD 78 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGD 78 (253)
|+||+|++..|.+++..+...+........ .+.+++..+|+.+..... ..+++|+++++++ .++++++|+||
T Consensus 41 vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~----~~~~~l~~~n~~l~~~~~--~~~~~T~~~~~id~~~~~l~~~~aG~ 114 (242)
T 3t91_A 41 ISDGMGNGARAHFESNETIKLLEKILESGI----DEKIAIKTINSILSLRTT--DEIYSTLDLSIIDLQDASCKFLKVGS 114 (242)
T ss_dssp EECC-----CCSEEECHHHHHHHHHHHHTC----CHHHHHHHHHHHHTTC------CCCCEEEEEEETTTCEEEEEEESC
T ss_pred EEeeCCCCHHHHHHHHHHHHHHHHHHHhCC----CHHHHHHHHHHHHHhcCC--CCeEeEEEEEEEECCCCEEEEEcCCC
Confidence 689999877766555554444432100001 145566777777765432 3578999999997 67899999999
Q ss_pred cceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcCeecCceehhhhhccccccCCCCCCCCcccCCceEEEEcCCC
Q 042247 79 SRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDGYLNGQLAVARALGDWHIKGSKGSSCPLSSEPELEELVLTEE 158 (253)
Q Consensus 79 Sr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~~~~l~~~ 158 (253)
+|+|++|+|++.+++.++. .+|... ..+++...+.+.++
T Consensus 115 ~~~~l~r~g~~~~l~~~~~------------------------------~lG~~~-----------~~~~~~~~~~l~~G 153 (242)
T 3t91_A 115 TPSFIKRGDQVMKVQASNL------------------------------PIGIIN-----------EFDVEVVSEQLKAG 153 (242)
T ss_dssp CCEEEEETTEEEECCCC-----------------------------------CCC-----------TTCEEEEEEECCTT
T ss_pred CceEEEECCEEEEecCCCc------------------------------eeEecC-----------CCcceEEEEEeCCC
Confidence 9999999999999876543 244321 44567788889999
Q ss_pred CeEEEEEcCCccccCC-----HHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCC---CCCcEEEEEEcCCCCCC
Q 042247 159 DEYLILGCDGLWDVMS-----SQCAVTMVRKELMQHNDPERCSKALVKEALQRNT---CDNLTVVVVCFSPNPPP 225 (253)
Q Consensus 159 d~~LvL~SDGv~d~l~-----~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~---~DN~Tvivv~~~~~~~~ 225 (253)
| .|+||||||||.++ ...+.+++... ...+++++++.|++.+...++ .||+|++++++.+..+.
T Consensus 154 D-~lll~SDGl~e~~~~~~~~~~~~~~ll~~~--~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvv~i~~~~~~~~ 225 (242)
T 3t91_A 154 D-LLIMMSDGIFEGPKHVENHDLWMKRKMKGL--KTNDPQEIADLLMEEVIRTRSGQIEDDMTVVVVRIDHNTPK 225 (242)
T ss_dssp C-EEEEECHHHHTCSTTCSCHHHHHHHHHHTC--CCCCHHHHHHHHHHHHHHHTTSCCCSCEEEEEEEEEECCCC
T ss_pred C-EEEEECCCcccCCCcccchHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHcCCCCCCceEEEEEEEecCCCc
Confidence 9 67799999999998 44455554321 246899999999999988763 59999999999876544
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.88 E-value=1.1e-21 Score=160.98 Aligned_cols=172 Identities=17% Similarity=0.183 Sum_probs=128.2
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEE--CCeEEEEEecc
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKSLDSSSGTTALTALIL--GRTMLIANAGD 78 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGD 78 (253)
|+||+|++..|..++..+...+......... ..+++..+|+.+..... ..+.+|+++++++ .++++++|+||
T Consensus 44 vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~----~~~~l~~~n~~l~~~~~--~~~~~T~~~~~id~~~~~l~~~~aG~ 117 (242)
T 3pu9_A 44 LVDGQGSGAGAKRLSLLVAGAAVRLLNEGVR----DGAAARAAHDFLYAMRD--GKVSAALDILSVDLASRSVLVTRNSE 117 (242)
T ss_dssp EEEESSSHHHHHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHTT--TCCCEEEEEEEEETTTTEEEEEEESC
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHhccC--CCcEEEEEEEEEECCCCEEEEEeCCC
Confidence 6899999999988887766555331111111 34566777777765442 3478999999997 66899999999
Q ss_pred cceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcCeecCceehhhhhccccccCCCCCCCCcccCCceEEEEcCCC
Q 042247 79 SRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDGYLNGQLAVARALGDWHIKGSKGSSCPLSSEPELEELVLTEE 158 (253)
Q Consensus 79 Sr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~~~~l~~~ 158 (253)
+++|++++|++.+++.++.+ +|... ..+++...+.+.++
T Consensus 118 ~~~~l~r~g~~~~l~~~~~~------------------------------lG~~~-----------~~~~~~~~~~l~~G 156 (242)
T 3pu9_A 118 VPMLLGRNGEFEQISESGGR------------------------------IGIYR-----------HTRPRVLEFPAEPG 156 (242)
T ss_dssp CCEEEEETTEEEEECCCCCC------------------------------BSSCT-----------TCCCEEEEEECCTT
T ss_pred CcEEEEECCEEEEeCCCCcc------------------------------ccccC-----------CCCceEEEEEeCCC
Confidence 99999999999999987753 45321 44677788899999
Q ss_pred CeEEEEEcCCccccCCH-------HHHHHHHHHHHhccCCHHHHHHHHHHHHHhcC---CCCCcEEEEEEcCCCC
Q 042247 159 DEYLILGCDGLWDVMSS-------QCAVTMVRKELMQHNDPERCSKALVKEALQRN---TCDNLTVVVVCFSPNP 223 (253)
Q Consensus 159 d~~LvL~SDGv~d~l~~-------~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g---~~DN~Tvivv~~~~~~ 223 (253)
| .|+||||||++..+. +++..++. ....+++++++.|++.+...+ ..||+|++++++.+..
T Consensus 157 d-~lll~TDGl~e~~~~~~~~~g~~~l~~l~~---~~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvlvv~~~~~~ 227 (242)
T 3pu9_A 157 L-TVILVSDGIIGAGGRRGQPLEFLATGGRVA---GPETPAQAIADELLEAALVADDGRAGDDMTVVVLRLRNVE 227 (242)
T ss_dssp C-EEEEECHHHHTTTTTTTCCCCHHHHHHHHC---CTTCCHHHHHHHHHHHHHHHTTTSCSSCEEEEEEEEEECC
T ss_pred C-EEEEECcCcccCCCCccccccHHHHHHHHh---ccCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEEecCC
Confidence 9 677999999987643 66543321 124689999999999998875 6799999999997544
No 21
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.81 E-value=2.6e-19 Score=147.84 Aligned_cols=171 Identities=15% Similarity=0.122 Sum_probs=112.2
Q ss_pred CccCCCchHHHHHHHHHHHHHHHh---c-CCCchhHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEE--CCeEEEE
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVE---D-THFSAGTRKAVKSAFGKVDHAFADAKSLDSSSGTTALTALIL--GRTMLIA 74 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~---~-~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~--~~~l~~a 74 (253)
|+||+|++..|..++..+...+.. . ............+++..+|+.+.+. ...+++|+++++++ .++++++
T Consensus 69 vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~---~~~~~~T~~~~~id~~~~~l~~~ 145 (255)
T 3f79_A 69 LADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINT---KLGKHVTMLGGVIDLEKNSLTYS 145 (255)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHHHHHHHHHHBTT---BSSCCEEEEEEEEETTTTEEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHhc---CCCCEEEEEEEEEECCCCEEEEE
Confidence 689999877777766555444422 1 0000111233567788888888753 23589999999996 6789999
Q ss_pred Eecc-cceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcCeecCceehhhhhccccccCCCCCCCCcccCCceEEE
Q 042247 75 NAGD-SRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDGYLNGQLAVARALGDWHIKGSKGSSCPLSSEPELEEL 153 (253)
Q Consensus 75 ~vGD-Sr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~~~ 153 (253)
|+|+ ++.|++++|++.+++.++.+ +|... ...++...+
T Consensus 146 ~aGh~p~~~l~~~g~~~~l~~~~~~------------------------------lG~~~-----------~~~~~~~~~ 184 (255)
T 3f79_A 146 IGGHLPLPVLFVEGQAGYLEGRGLP------------------------------VGLFD-----------DATYDDRVM 184 (255)
T ss_dssp ECSCSCCCEEEC--CEEECCC-----------------------------------CCSS-----------CCCCCC---
T ss_pred eCCCCCceEEEeCCeEEEeCCCCce------------------------------EEEcC-----------CCceEEEEE
Confidence 9999 56999999999999876643 45322 345666788
Q ss_pred EcCCCCeEEEEEcCCccccCCHHH-------HHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcC
Q 042247 154 VLTEEDEYLILGCDGLWDVMSSQC-------AVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVCFS 220 (253)
Q Consensus 154 ~l~~~d~~LvL~SDGv~d~l~~~e-------i~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~ 220 (253)
.+.++| .|+||||||++.++.++ +.+++... ..+++++++.+. .+...+..||+|+++++..
T Consensus 185 ~l~~gd-~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~---~~~~~~~~~~l~-~~~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 185 ELPPSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAAA---GGTLDGLRQVFG-LANLAEMPDDIALLVLSRN 253 (255)
T ss_dssp BCCSSE-EEEEECSCCCCCSCC---CCTTTSSHHHHHHH---SCSSHHHHHHC------CCSSSCEEEEEEEEC
T ss_pred EECCCC-EEEEECCCcCcccCCCcchhhHHHHHHHHHhc---CCCHHHHHHHHH-hccCCCCCCCEEEEEEEec
Confidence 888888 67799999999998777 77777653 346788888877 5677788999999999864
No 22
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.78 E-value=9.5e-18 Score=132.83 Aligned_cols=156 Identities=14% Similarity=0.099 Sum_probs=116.7
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEE--CCeEEEEEecc
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKSLDSSSGTTALTALIL--GRTMLIANAGD 78 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGD 78 (253)
|+||+|.+..|..++..+...+..... ..+ .+.+..+|+.+.. ..|+|++++.++ .+++.++|+|+
T Consensus 36 v~Dv~GhG~~Aa~~s~~~~~~l~~~~~--~~p----~~il~~ln~~l~~------~~~~t~~~~~id~~~~~l~~~~aGh 103 (193)
T 3zt9_A 36 VGDGIGHGPEAARAAEIAIASMESSMN--TGL----VNIFQLCHRELRG------TRGAVAALCRVDRRQGLWQAAIVGN 103 (193)
T ss_dssp EEEESSSHHHHHHHHHHHHHHHHHHTT--SCH----HHHHHHHHHHHTT------SSCEEEEEEEEETTTTEEEEEEESS
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHccc--CCH----HHHHHHHHHHHhc------cCceEEEEEEEECCCCEEEEEecCC
Confidence 689999888888888888877765322 122 3455667777642 247888888888 56899999999
Q ss_pred cceEEEecCceeECCCCCCCCChhHHHHHHHcCCeEEcCeecCceehhhhhccccccCCCCCCCCcccCCceEEEEcCCC
Q 042247 79 SRAVLGKRGRAIELSKDHKPNVTSERLRIEKLGGVIYDGYLNGQLAVARALGDWHIKGSKGSSCPLSSEPELEELVLTEE 158 (253)
Q Consensus 79 Sr~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~~~~l~~~ 158 (253)
++.|++|++++.++...+- .+|... ..+++...+.+.++
T Consensus 104 ~~~~l~~~~~~~~l~~~~g------------------------------~lG~~~-----------~~~~~~~~~~l~~g 142 (193)
T 3zt9_A 104 IHVKILSAKGIITPLATPG------------------------------ILGYNY-----------PHQLLIAKGSYQEG 142 (193)
T ss_dssp CEEEEEETTEEECCCCBCC------------------------------BBTTBC-----------CSSCCCEEEECCTT
T ss_pred ceEEEEcCCcEEEecCCCC------------------------------ceeccC-----------CccceeEEeccCCC
Confidence 9999999987776543211 134211 22566778899999
Q ss_pred CeEEEEEcCCccccCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhcCCCCCcEEEEEE
Q 042247 159 DEYLILGCDGLWDVMSSQCAVTMVRKELMQHNDPERCSKALVKEALQRNTCDNLTVVVVC 218 (253)
Q Consensus 159 d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~ 218 (253)
| .|+|||||+++.+..+++..++ ..+|+++|+.|++.+ .++.||+|+++++
T Consensus 143 d-~l~l~sDGl~e~~~~~~~~~~~------~~~~~~~a~~l~~~~--~~~~Dd~tvlv~r 193 (193)
T 3zt9_A 143 D-LFLIHSDGIQEGAVPLALLANY------RLTAEELVRLIGEKY--GRRDDDVAVIVAR 193 (193)
T ss_dssp C-EEEEECTTSCTTCSCGGGGGCT------TSCHHHHHHHHHHHH--CCTTSCEEEEEEC
T ss_pred C-EEEEECCCCCCccChhhhhchh------cCCHHHHHHHHHHHh--CcCCCCeEEEEEC
Confidence 9 6779999999999998766543 358999999999997 4589999999975
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.45 E-value=7.4e-12 Score=109.61 Aligned_cols=172 Identities=16% Similarity=0.099 Sum_probs=106.3
Q ss_pred CccCCCchHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEE--CCeEEEEEecc
Q 042247 1 VFDGHGGIDAASFTKNNILGFIVEDTHFSAGTRKAVKSAFGKVDHAFADAKSLDSSSGTTALTALIL--GRTMLIANAGD 78 (253)
Q Consensus 1 V~DG~GG~~~a~~a~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGD 78 (253)
|+|++|.+-.|.+++..+...+.........+ .+++..+|+.+. .. ...+++|++++.++ .+++.++++|.
T Consensus 69 v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~~~p----~~il~~ln~~~~-~~--~~~~~~t~~~~~id~~~~~l~~~~aGh 141 (399)
T 3ke6_A 69 VGDVVGHGVEAAAVMSQLRTALRMQISAGYTV----VEALEAVDRFHK-QV--PGSKSATMCVGSLDFTSGEFQYCTAGH 141 (399)
T ss_dssp EEECSSCSHHHHHHHHHHHHHHHHHHHTTCCH----HHHHHHHHHHGG-GS--TTCTTCEEEEEEEETTTCEEEEEEESS
T ss_pred EEEecCCCHHHHHHHHHHHHHHHHHHhcCCCH----HHHHHHHHHHHH-hc--CCCcEEEEEEEEEECCCCEEEEECCCC
Confidence 57999955555555544444443211111122 334555665332 22 23478999999997 56899999999
Q ss_pred cceEEEe-cCceeECCCCCCCCChhHHHHHHHcCCeEEcCeecCceehhhhhccccccCCCCCCCCcccCCceEEEEcCC
Q 042247 79 SRAVLGK-RGRAIELSKDHKPNVTSERLRIEKLGGVIYDGYLNGQLAVARALGDWHIKGSKGSSCPLSSEPELEELVLTE 157 (253)
Q Consensus 79 Sr~~l~r-~~~~~~lT~dh~~~~~~e~~ri~~~~~~i~~~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~~~~l~~ 157 (253)
.+.|+++ +|++..+..++.+ .+|. ........+.+.+
T Consensus 142 ~~~~l~~~~g~~~~l~~~~~~-----------------------------plG~-------------~~~~~~~~~~l~~ 179 (399)
T 3ke6_A 142 PPPLLVTADASARYVEPTGAG-----------------------------PLGS-------------GTGFPVRSEVLNI 179 (399)
T ss_dssp CCCEEECTTSCEEECCCCSCC-----------------------------CTTS-------------SCCCCCEEEECCT
T ss_pred ChhEEEeCCCCEEEeecCCCc-----------------------------ceEC-------------CCCceeEEEEECC
Confidence 9999998 6778877765431 2342 2234556788999
Q ss_pred CCeEEEEEcCCccccCCH------HHHHHHHHHHHhcc-----CCHHHHHHHHHHHHHh-----cCCCCCcEEEEEEcCC
Q 042247 158 EDEYLILGCDGLWDVMSS------QCAVTMVRKELMQH-----NDPERCSKALVKEALQ-----RNTCDNLTVVVVCFSP 221 (253)
Q Consensus 158 ~d~~LvL~SDGv~d~l~~------~ei~~~~~~~~~~~-----~~~~~~a~~l~~~a~~-----~g~~DN~Tvivv~~~~ 221 (253)
+| .|+|+|||+.|.... +.+.+++....... .++...++.+++.+++ .+..||+|++++++.+
T Consensus 180 Gd-~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~~ 258 (399)
T 3ke6_A 180 GD-AILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRA 258 (399)
T ss_dssp TC-EEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEECC
T ss_pred CC-EEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEeeC
Confidence 99 677999999998765 44555554421110 0233344444444433 4578999999999987
Q ss_pred C
Q 042247 222 N 222 (253)
Q Consensus 222 ~ 222 (253)
.
T Consensus 259 ~ 259 (399)
T 3ke6_A 259 P 259 (399)
T ss_dssp C
T ss_pred C
Confidence 4
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.84 E-value=3.4e-08 Score=85.98 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCceEEEEEEE--CCeEEEEEecccc-eEEEecCceeECCCCCCCCChhHHHHHHHcCCe
Q 042247 37 KSAFGKVDHAFADAKSLDSSSGTTALTALIL--GRTMLIANAGDSR-AVLGKRGRAIELSKDHKPNVTSERLRIEKLGGV 113 (253)
Q Consensus 37 ~~a~~~~~~~i~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDSr-~~l~r~~~~~~lT~dh~~~~~~e~~ri~~~~~~ 113 (253)
.+.+..+|+.+.+.. ..+..|++++.++ .+++.++++|-.. .++.++|++..+.....
T Consensus 248 ~~~l~~ln~~l~~~~---~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~---------------- 308 (394)
T 3eq2_A 248 SEVLAHINRGLINTK---LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGL---------------- 308 (394)
T ss_dssp HHHHHHHHHHHHHTT---CCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC------------------
T ss_pred HHHHHHHHHHHhccC---cCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCc----------------
Confidence 345566666665422 3467899999887 5689999999854 77788888887764322
Q ss_pred EEcCeecCceehhhhhccccccCCCCCCCCcccCCceEEEEcCCCCeEEEEEcCCccccCCH-------HHHHHHHHHHH
Q 042247 114 IYDGYLNGQLAVARALGDWHIKGSKGSSCPLSSEPELEELVLTEEDEYLILGCDGLWDVMSS-------QCAVTMVRKEL 186 (253)
Q Consensus 114 i~~~~~~~~~~~tr~lG~~~~k~~~~~~~~v~~~p~~~~~~l~~~d~~LvL~SDGv~d~l~~-------~ei~~~~~~~~ 186 (253)
.+|... ........+.+.+|| .|+|+|||+.|.... +.+.+++..
T Consensus 309 --------------plG~~~-----------~~~~~~~~~~l~~gd-~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~-- 360 (394)
T 3eq2_A 309 --------------PVGLFD-----------DATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAA-- 360 (394)
T ss_dssp --------------CCSCCC-----------CC--CCEEEECCSSC-EEEECSSCCCC-----CCSTTTTTSHHHHHT--
T ss_pred --------------eeEecC-----------CCceEEEEEEeCCCC-EEEEECCCcccccCcccchhhHHHHHHHHHh--
Confidence 244321 233456778899999 677999999997443 334444443
Q ss_pred hccCCHHHHHHHHHHHHHhc---CCCCCcEEEEEEcCC
Q 042247 187 MQHNDPERCSKALVKEALQR---NTCDNLTVVVVCFSP 221 (253)
Q Consensus 187 ~~~~~~~~~a~~l~~~a~~~---g~~DN~Tvivv~~~~ 221 (253)
....++ .+.+..... ...||+|+++++.+.
T Consensus 361 -~~~~~~----~l~~~~~~~~~~~~~DDit~l~i~~~~ 393 (394)
T 3eq2_A 361 -AGGTLD----GLRQVFGLANLAEMPDDIALLVLSRNL 393 (394)
T ss_dssp -TC--CH----HHHHHHSCCCSCC--CCCEEEEEC---
T ss_pred -cchhHH----HHHHHhcccCCCCCCCceEEEEEeccc
Confidence 122223 333333222 347999999998653
No 25
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=71.97 E-value=0.25 Score=44.56 Aligned_cols=80 Identities=10% Similarity=-0.030 Sum_probs=61.6
Q ss_pred hhhhhccccccCCCCCCCCcccCCceEEEEcCC--CC----eEEEEEcCCccccCCHHHHHHHHHHHHh-ccCCHHHHHH
Q 042247 125 VARALGDWHIKGSKGSSCPLSSEPELEELVLTE--ED----EYLILGCDGLWDVMSSQCAVTMVRKELM-QHNDPERCSK 197 (253)
Q Consensus 125 ~tr~lG~~~~k~~~~~~~~v~~~p~~~~~~l~~--~d----~~LvL~SDGv~d~l~~~ei~~~~~~~~~-~~~~~~~~a~ 197 (253)
++||+|-.. ..+.++..+.+.+ |+ .|+ +++ |+++...++.+++.+.-. ...+.+..++
T Consensus 44 l~~~~~l~~-----------~~~~d~~~~~~~~~ig~~~~~~f~-~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~~~~ 108 (543)
T 3c4z_A 44 LSKCEALRE-----------SLDLGFEGMCLEQPIGKRLFQQFL-RTH---EQHGPALQLWKDIEDYDTADDALRPQKAQ 108 (543)
T ss_dssp GGGGHHHHH-----------HSCCCHHHHHTSSHHHHHHHHHHH-HHC---GGGHHHHHHHHHHHHHHTSCTTTHHHHHH
T ss_pred chHHHHHHh-----------ccccCHHHhhccCcccHHHHHHHH-hcC---CchhHHHHHHhhhhhhccCchhhHHHHHH
Confidence 689988643 5677777888877 77 666 666 888888888877776421 2346888999
Q ss_pred HHHHHHHhcCCCCCcEEE----EEEc
Q 042247 198 ALVKEALQRNTCDNLTVV----VVCF 219 (253)
Q Consensus 198 ~l~~~a~~~g~~DN~Tvi----vv~~ 219 (253)
.|++.+..+++.||++.+ +..+
T Consensus 109 ~l~~~~~~~~~~d~~~~~~~~~v~~v 134 (543)
T 3c4z_A 109 ALRAAYLEPQAQLFCSFLDAETVARA 134 (543)
T ss_dssp HHHHHHTSTTCTTCCTTSCHHHHHHH
T ss_pred HHHHHhhCchhhhhhccCCHHHHhhh
Confidence 999999999999999998 6666
No 26
>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*
Probab=46.78 E-value=68 Score=22.04 Aligned_cols=57 Identities=11% Similarity=0.089 Sum_probs=43.1
Q ss_pred EcCCccccCCHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCCC
Q 042247 165 GCDGLWDVMSSQCAVTMVRKELMQH--NDPERCSKALVKEALQRNTCDNLTVVVVCFSPNPP 224 (253)
Q Consensus 165 ~SDGv~d~l~~~ei~~~~~~~~~~~--~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~~ 224 (253)
.||-+-+.++-.++.+.+.+.+... .-.+.+|+.+.+..+. - ..+.-+-+++.++..
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~-~--~~v~~v~V~v~Kp~a 102 (119)
T 1nbu_A 44 NSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMD-D--QRVHAVEVAVHKPQA 102 (119)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHT-S--TTCCEEEEEEECTTC
T ss_pred ccccchhccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHhc-C--CCccEEEEEEECCCC
Confidence 3788999999999999998876543 4688899999999887 2 445666666665543
No 27
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=44.27 E-value=67 Score=21.29 Aligned_cols=58 Identities=9% Similarity=0.169 Sum_probs=41.9
Q ss_pred CCCeEEEEEcCCccccCCHHHHHHHHHHHHhcc------------CCHHHHHHHHHHHHHhcCCCCCcEE
Q 042247 157 EEDEYLILGCDGLWDVMSSQCAVTMVRKELMQH------------NDPERCSKALVKEALQRNTCDNLTV 214 (253)
Q Consensus 157 ~~d~~LvL~SDGv~d~l~~~ei~~~~~~~~~~~------------~~~~~~a~~l~~~a~~~g~~DN~Tv 214 (253)
..|.|+||-++-==.+++.+|+...++..+... .+.++.|+.|++.+.+-.-....++
T Consensus 8 q~D~yVvLEp~~~EqfLT~~Ell~~Lk~~L~~~~~~~LP~dL~~~~s~~~qaq~Lldt~CELei~pG~~l 77 (94)
T 2krx_A 8 QQDNFVVLETNQPEQFLTTIELLEKLKGELEKISFSDLPLELQKLDSLPAQAQHLIDTSCELDVGAGKYL 77 (94)
T ss_dssp CCCCEEEEESSSCSEEECHHHHHHHHHHHHHHSCTTTSCHHHHHCCCHHHHHHHHHHHCCCEEEETTEEE
T ss_pred ccCCEEEecCCCCcccCCHHHHHHHHHHHHHhCccccCCHHHHhCCCHHHHHHHHHHheeeeeeCCCCEE
Confidence 456688888876677789999998888877655 4578889999988765433333344
No 28
>3r2e_A Dihydroneopterin aldolase; structural genomics, IDP90567, center for structural genomic infectious diseases, csgid, bifunctional; 2.15A {Yersinia pestis}
Probab=41.83 E-value=77 Score=22.71 Aligned_cols=56 Identities=20% Similarity=0.123 Sum_probs=42.1
Q ss_pred EcCCccccCCHHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 042247 165 GCDGLWDVMSSQCAVTMVRKELMQ--HNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNP 223 (253)
Q Consensus 165 ~SDGv~d~l~~~ei~~~~~~~~~~--~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~ 223 (253)
.||-+-+.++-.++.+.+.+.+.. ..-.+.+|+.|.+..+..-. +.-+-|++.++.
T Consensus 67 ~sDdl~~tvdY~~v~~~I~~~v~~~~f~LlE~LAe~Ia~~ll~~~~---v~~v~V~V~KP~ 124 (143)
T 3r2e_A 67 GSDDVNDCLSYADISEAVIQHVGSQRFALVERVAEEVAELLLRRFN---SPWVRIKVSKPG 124 (143)
T ss_dssp TCCCTTSSCCHHHHHHHHHHHHHSSEESCHHHHHHHHHHHHHHHHC---CSEEEEEEECTT
T ss_pred cccccccccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHhCC---ccEEEEEEECCC
Confidence 367788899999999999987764 35788999999999887643 555556665543
No 29
>3v9o_A Dihydroneopterin aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: GUN; 1.45A {Burkholderia thailandensis}
Probab=41.29 E-value=95 Score=22.18 Aligned_cols=55 Identities=18% Similarity=0.131 Sum_probs=41.0
Q ss_pred cCCccccCCHHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 042247 166 CDGLWDVMSSQCAVTMVRKELMQ--HNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNP 223 (253)
Q Consensus 166 SDGv~d~l~~~ei~~~~~~~~~~--~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~ 223 (253)
||-+-+.++-.++.+.+.+.+.. ..-.+.+|+.|.+..+.. ..+.-+-|++.+..
T Consensus 66 sDdl~~tvdY~~v~~~I~~~v~~~~~~LlE~lAe~Ia~~il~~---~~v~~v~V~V~Kp~ 122 (143)
T 3v9o_A 66 EDKLREVVDYDLMKQSVAQCVARGHIHLQETLCDAIAASLLAH---DAVRAVRVSTEKPD 122 (143)
T ss_dssp SCCGGGSCCTHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHSS---TTCCEEEEEEEETT
T ss_pred CccchhccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhc---CCccEEEEEEECCC
Confidence 56677888889999999987764 457889999999999875 34555555555443
No 30
>1z9w_A DHNA, dihydroneopterin aldolase; FOLB, structural genomics, TB ST genomics; 2.50A {Mycobacterium tuberculosis H37RV} SCOP: d.96.1.3
Probab=39.88 E-value=72 Score=22.49 Aligned_cols=56 Identities=11% Similarity=0.089 Sum_probs=42.2
Q ss_pred EcCCccccCCHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 042247 165 GCDGLWDVMSSQCAVTMVRKELMQH--NDPERCSKALVKEALQRNTCDNLTVVVVCFSPNP 223 (253)
Q Consensus 165 ~SDGv~d~l~~~ei~~~~~~~~~~~--~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~ 223 (253)
.||-+-+.++-.++.+.+.+.+... .-.+.+|+.+.+..+. - ..+.-+-|++.++.
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~il~-~--~~v~~v~V~v~Kp~ 101 (133)
T 1z9w_A 44 NSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMD-D--QRVHAVEVAVHKPQ 101 (133)
T ss_dssp GCSSHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHH-S--TTEEEEEEEEEEEC
T ss_pred cccCchhccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhc-C--CCccEEEEEEECCC
Confidence 3788888999999999998877543 5688999999999987 2 44666666665544
No 31
>1b9l_A Protein (epimerase); isomerase; 2.90A {Escherichia coli} SCOP: d.96.1.3
Probab=36.91 E-value=1e+02 Score=21.16 Aligned_cols=56 Identities=9% Similarity=0.068 Sum_probs=41.2
Q ss_pred EcCCccccCCHHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 042247 165 GCDGLWDVMSSQCAVTMVRKELMQ--HNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNP 223 (253)
Q Consensus 165 ~SDGv~d~l~~~ei~~~~~~~~~~--~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~ 223 (253)
.||-+-+.++-.++.+.+.+.+.. ..-.+.+|+.+.+..+.. ..+.-+-|++.++.
T Consensus 47 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~---~~v~~v~V~v~Kp~ 104 (120)
T 1b9l_A 47 TSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREH---HWVTYAEVEIDKLH 104 (120)
T ss_dssp GGGTCSSCCCHHHHHHHHHHHHHTSEESCHHHHHHHHHHHHTCS---TTCSEEEEEEEEET
T ss_pred ccCCcccccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhcc---CCceEEEEEEECCC
Confidence 378899999999999999887654 356889999999887753 44555555555443
No 32
>3o1k_A Dihydroneopterin aldolase FOLB, putative; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Vibrio cholerae o1 biovar el tor}
Probab=32.17 E-value=1.3e+02 Score=21.06 Aligned_cols=54 Identities=13% Similarity=0.122 Sum_probs=41.2
Q ss_pred EcCCccccCCHHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCC
Q 042247 165 GCDGLWDVMSSQCAVTMVRKELMQ--HNDPERCSKALVKEALQRNTCDNLTVVVVCFSP 221 (253)
Q Consensus 165 ~SDGv~d~l~~~ei~~~~~~~~~~--~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~ 221 (253)
.||-+-+.++-.++.+.+.+.+.. ....+.+|+.+.+..+..-. +.-+-|++.+
T Consensus 58 ~sDdl~~tvdY~~v~~~I~~~v~~~~~~LiE~lA~~Ia~~ll~~~~---v~~v~V~V~K 113 (132)
T 3o1k_A 58 KSDDVADALDYAQVSQAVLEHIEQGRFLLVERVAEEVAELIMTRFA---VPWLRIRLTK 113 (132)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHHTCEESCHHHHHHHHHHHHHHHHC---CSEEEEEEEE
T ss_pred cccccccccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHhCC---ccEEEEEEEC
Confidence 468888999999999999987764 45788999999999987643 4455555544
No 33
>2o90_A DHNA, dihydroneopterin aldolase; monapterin, drug design, atomic resolution, X-RAY crystallography, lyase; HET: NEU; 1.07A {Escherichia coli} PDB: 2o9m_A*
Probab=28.78 E-value=1.4e+02 Score=20.44 Aligned_cols=56 Identities=18% Similarity=0.081 Sum_probs=41.4
Q ss_pred EcCCccccCCHHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 042247 165 GCDGLWDVMSSQCAVTMVRKELMQ--HNDPERCSKALVKEALQRNTCDNLTVVVVCFSPNP 223 (253)
Q Consensus 165 ~SDGv~d~l~~~ei~~~~~~~~~~--~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~ 223 (253)
.||-+-+.++-.++.+.+.+.+.. ..-.+.+|+.+.+..+..-. +.-+-|++.++.
T Consensus 43 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~~~---v~~v~V~v~Kp~ 100 (122)
T 2o90_A 43 KSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFN---SPWVRIKLSKPG 100 (122)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTTCEESCHHHHHHHHHHHHHHHSS---CSCEEEEEECTT
T ss_pred cccccccccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhhCC---ceEEEEEEECCC
Confidence 468888999999999999887654 35688999999999988654 344445554443
No 34
>1dhn_A DHNA, 7,8-dihydroneopterin aldolase; pterin binding, folate biosynthesis, antibiotic target, beta; 1.65A {Staphylococcus aureus} SCOP: d.96.1.3 PDB: 1rri_A* 1rrw_A* 1rry_A* 1rs2_A* 1rs4_A* 1rsd_A* 1rsi_A* 1u68_A* 2dhn_A* 2nm2_A* 2nm3_A*
Probab=28.02 E-value=1.5e+02 Score=20.34 Aligned_cols=57 Identities=11% Similarity=0.060 Sum_probs=42.1
Q ss_pred EcCCccccCCHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCCC
Q 042247 165 GCDGLWDVMSSQCAVTMVRKELMQH--NDPERCSKALVKEALQRNTCDNLTVVVVCFSPNP 223 (253)
Q Consensus 165 ~SDGv~d~l~~~ei~~~~~~~~~~~--~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~~ 223 (253)
.||-+-+.++-.++.+.+.+.+... .-.+.+|+.+.+..+..-. .+.-+-|++.++.
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~~~--~v~~v~V~v~Kp~ 102 (121)
T 1dhn_A 44 RTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYN--RVMETKVRITKEN 102 (121)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHHHCT--TEEEEEEEEEESS
T ss_pred ccCCccceeCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHCC--CceEEEEEEEcCC
Confidence 3788999999999999999877543 4678899999999987522 2555555555443
No 35
>4aey_A D-erythro-7,8-dihydroneopterin triphosphate epime; isomerase, pteridine biosynthesis; 3.00A {Pseudomonas aeruginosa}
Probab=24.66 E-value=2e+02 Score=20.83 Aligned_cols=55 Identities=7% Similarity=0.098 Sum_probs=34.8
Q ss_pred EEcCCccccCCHHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHhcCCCCCcEEEEEE
Q 042247 164 LGCDGLWDVMSSQCAVTMVRKELMQ--HNDPERCSKALVKEALQRNTCDNLTVVVVC 218 (253)
Q Consensus 164 L~SDGv~d~l~~~ei~~~~~~~~~~--~~~~~~~a~~l~~~a~~~g~~DN~Tvivv~ 218 (253)
-.||-+-+.++-.++.+.+.+.+.. ..-.+.+|++|.+..++...-..++|-|-+
T Consensus 82 ~~sDdL~dTvdY~~v~~~I~~~v~~~~f~LIEtLAe~Ia~~ll~~~~v~~V~V~V~K 138 (156)
T 4aey_A 82 VEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDK 138 (156)
T ss_dssp -------CCCHHHHHHHHHHHHHHTSEESCHHHHHHHHHHHHHHSCCCSEEEEEEEE
T ss_pred cccCcchhccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHhcCCccEEEEEEEC
Confidence 4578888999999999988887654 357889999999988765444444444333
No 36
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.37 E-value=54 Score=22.04 Aligned_cols=24 Identities=25% Similarity=0.313 Sum_probs=20.0
Q ss_pred EEEEcCCccccCCHHHHHHHHHHH
Q 042247 162 LILGCDGLWDVMSSQCAVTMVRKE 185 (253)
Q Consensus 162 LvL~SDGv~d~l~~~ei~~~~~~~ 185 (253)
.|+.|.|+.+.++++|+..++...
T Consensus 67 ~i~v~~gLl~~l~~~El~aVlaHE 90 (107)
T 3cqb_A 67 LVAVSTGLLHNMTRDEAEAVLAHE 90 (107)
T ss_dssp EEEEEHHHHHHSCHHHHHHHHHHH
T ss_pred EEEEcHHHHhhCCHHHHHHHHHHH
Confidence 448899999999999998888654
No 37
>1sql_A Dihydroneopterin aldolase; tetrahydrofolate biosynthesis, aldolase classes, retroaldol reaction, purin binding, schiff base, lyase; HET: GUN; 2.20A {Arabidopsis thaliana} SCOP: d.96.1.3
Probab=20.62 E-value=2.4e+02 Score=20.12 Aligned_cols=56 Identities=18% Similarity=0.191 Sum_probs=40.8
Q ss_pred EcCCccccCCHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHhcCCCCCcEEEEEEcCCC
Q 042247 165 GCDGLWDVMSSQCAVTMVRKELMQH--NDPERCSKALVKEALQRNTCDNLTVVVVCFSPN 222 (253)
Q Consensus 165 ~SDGv~d~l~~~ei~~~~~~~~~~~--~~~~~~a~~l~~~a~~~g~~DN~Tvivv~~~~~ 222 (253)
.||-+-+.++-.++.+.+.+.+... .-.+.+|+.+.+..+..- ..+.-+-|++.++
T Consensus 63 ~sDdl~~tvdY~~v~~~I~~~v~~~~f~LiE~lA~~Ia~~il~~f--p~v~~v~V~V~Kp 120 (146)
T 1sql_A 63 ESDNLEDTISYVDIFSLAKEIVEGSPRNLLETVAELIASKTLEKF--HQINAVRVKLSKP 120 (146)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHHHC--TTCCEEEEEEEES
T ss_pred cccCchhccCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHC--CCceEEEEEEECC
Confidence 3788999999999999999877543 467889999999998753 2344444455443
Done!