Query 042249
Match_columns 264
No_of_seqs 182 out of 1400
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 04:21:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042249.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042249hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02992 coniferyl-alcohol glu 100.0 3.9E-48 8.5E-53 363.7 24.1 258 1-261 210-472 (481)
2 PLN02410 UDP-glucoronosyl/UDP- 100.0 1E-47 2.2E-52 359.6 24.1 236 1-259 213-451 (451)
3 PLN03015 UDP-glucosyl transfer 100.0 1.2E-47 2.6E-52 359.0 23.9 248 1-257 214-467 (470)
4 PLN02207 UDP-glycosyltransfera 100.0 1.7E-47 3.6E-52 358.7 23.8 237 1-259 221-466 (468)
5 PLN00164 glucosyltransferase; 100.0 2.4E-47 5.3E-52 360.0 24.4 252 1-259 216-474 (480)
6 PLN02764 glycosyltransferase f 100.0 5.2E-47 1.1E-51 353.5 24.5 240 1-263 209-450 (453)
7 PLN02863 UDP-glucoronosyl/UDP- 100.0 3.8E-47 8.2E-52 358.0 23.3 240 1-260 224-473 (477)
8 PLN02208 glycosyltransferase f 100.0 7.5E-47 1.6E-51 353.0 23.7 236 1-259 203-440 (442)
9 PLN02173 UDP-glucosyl transfer 100.0 8.2E-47 1.8E-51 352.6 23.7 229 1-257 203-447 (449)
10 PLN02210 UDP-glucosyl transfer 100.0 1.3E-46 2.8E-51 353.0 24.1 230 1-257 209-454 (456)
11 PLN02555 limonoid glucosyltran 100.0 1.5E-46 3.2E-51 353.5 23.9 238 1-259 223-470 (480)
12 PLN03004 UDP-glycosyltransfera 100.0 5.1E-47 1.1E-51 354.2 20.1 229 1-247 218-450 (451)
13 PLN02534 UDP-glycosyltransfera 100.0 4.1E-46 8.9E-51 351.1 24.5 242 1-260 225-488 (491)
14 PLN00414 glycosyltransferase f 100.0 8.8E-46 1.9E-50 346.1 24.5 240 1-263 202-445 (446)
15 PLN02167 UDP-glycosyltransfera 100.0 4.8E-46 1E-50 351.3 22.5 241 1-260 225-474 (475)
16 PLN03007 UDP-glucosyltransfera 100.0 6.4E-46 1.4E-50 351.1 23.4 240 1-259 227-481 (482)
17 PLN02554 UDP-glycosyltransfera 100.0 2.3E-45 5E-50 347.1 22.4 247 1-259 220-479 (481)
18 PLN02152 indole-3-acetate beta 100.0 2.6E-45 5.7E-50 343.0 22.4 240 1-257 206-455 (455)
19 PLN02670 transferase, transfer 100.0 6.2E-45 1.3E-49 341.7 24.3 239 1-262 223-469 (472)
20 PLN02562 UDP-glycosyltransfera 100.0 1.1E-44 2.3E-49 339.5 23.5 227 1-257 215-448 (448)
21 PLN02448 UDP-glycosyltransfera 100.0 1.2E-43 2.7E-48 333.8 22.5 228 1-258 218-457 (459)
22 PF00201 UDPGT: UDP-glucoronos 100.0 1.9E-38 4.2E-43 301.4 12.4 188 7-237 237-425 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 7.2E-37 1.6E-41 290.6 21.7 209 6-258 255-466 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 8.8E-32 1.9E-36 255.2 19.7 188 21-237 244-438 (496)
25 COG1819 Glycosyl transferases, 100.0 2E-28 4.3E-33 227.1 17.8 185 25-258 216-400 (406)
26 TIGR01426 MGT glycosyltransfer 100.0 1.1E-27 2.5E-32 221.1 19.8 177 21-237 199-375 (392)
27 cd03784 GT1_Gtf_like This fami 99.9 1.6E-26 3.5E-31 213.5 18.4 161 39-237 226-387 (401)
28 PRK12446 undecaprenyldiphospho 99.7 7.9E-16 1.7E-20 140.6 15.6 174 22-230 154-335 (352)
29 PF04101 Glyco_tran_28_C: Glyc 99.6 1.6E-16 3.4E-21 130.0 -0.3 135 56-219 1-145 (167)
30 COG0707 MurG UDP-N-acetylgluco 99.6 1.7E-13 3.7E-18 125.1 16.6 137 53-219 182-325 (357)
31 PF13528 Glyco_trans_1_3: Glyc 99.5 8.8E-14 1.9E-18 124.6 12.2 122 53-215 191-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.4 1E-12 2.2E-17 118.5 11.3 82 129-219 230-315 (321)
33 PRK00726 murG undecaprenyldiph 99.4 7E-12 1.5E-16 114.1 16.5 94 130-232 237-335 (357)
34 cd03785 GT1_MurG MurG is an N- 99.3 4.5E-11 9.7E-16 108.1 13.1 86 128-219 235-325 (350)
35 PLN02605 monogalactosyldiacylg 99.2 2E-09 4.4E-14 99.3 18.6 81 128-218 265-347 (382)
36 PRK13608 diacylglycerol glucos 99.1 2.3E-09 4.9E-14 99.4 17.2 135 52-219 200-339 (391)
37 PRK13609 diacylglycerol glucos 99.1 4E-09 8.6E-14 97.0 17.7 135 52-219 200-339 (380)
38 TIGR01133 murG undecaprenyldip 99.0 3.2E-09 7E-14 95.9 12.1 77 137-219 243-322 (348)
39 TIGR03590 PseG pseudaminic aci 98.9 5E-09 1.1E-13 92.9 8.9 105 54-184 170-278 (279)
40 TIGR03492 conserved hypothetic 98.9 8.9E-08 1.9E-12 89.0 16.5 186 6-219 170-365 (396)
41 TIGR00215 lpxB lipid-A-disacch 98.9 2E-08 4.3E-13 93.0 11.9 105 138-253 261-383 (385)
42 PRK00025 lpxB lipid-A-disaccha 98.7 1.2E-07 2.6E-12 86.9 12.5 89 138-233 255-357 (380)
43 COG4671 Predicted glycosyl tra 98.6 7.2E-07 1.6E-11 79.9 12.4 87 127-219 276-366 (400)
44 KOG3349 Predicted glycosyltran 98.4 4.9E-06 1.1E-10 66.0 10.7 115 55-194 4-131 (170)
45 cd03814 GT1_like_2 This family 98.3 2.5E-05 5.4E-10 69.6 14.1 80 128-219 247-333 (364)
46 PRK05749 3-deoxy-D-manno-octul 98.2 0.00014 3E-09 68.0 17.4 84 139-231 314-402 (425)
47 cd03795 GT1_like_4 This family 98.1 3.5E-05 7.5E-10 69.0 11.6 147 55-231 191-346 (357)
48 cd03817 GT1_UGDG_like This fam 98.0 0.00039 8.4E-09 61.8 16.7 93 128-233 259-359 (374)
49 COG3980 spsG Spore coat polysa 98.0 0.00011 2.3E-09 64.4 11.1 167 25-230 133-302 (318)
50 PF00534 Glycos_transf_1: Glyc 97.9 5.3E-05 1.1E-09 61.3 8.6 80 128-219 73-159 (172)
51 TIGR00236 wecB UDP-N-acetylglu 97.9 0.00016 3.4E-09 66.2 12.7 84 128-228 255-341 (365)
52 cd03823 GT1_ExpE7_like This fa 97.9 0.00087 1.9E-08 59.4 16.8 81 127-219 242-330 (359)
53 cd03801 GT1_YqgM_like This fam 97.9 0.0011 2.4E-08 58.1 17.4 81 127-219 255-342 (374)
54 cd03800 GT1_Sucrose_synthase T 97.9 0.00024 5.3E-09 64.6 12.8 80 128-219 283-369 (398)
55 cd03786 GT1_UDP-GlcNAc_2-Epime 97.9 0.00014 3.1E-09 66.0 10.9 135 53-219 197-338 (363)
56 PRK15427 colanic acid biosynth 97.9 0.00026 5.7E-09 66.0 12.8 112 128-258 279-405 (406)
57 cd03825 GT1_wcfI_like This fam 97.8 0.0021 4.5E-08 57.6 18.2 79 129-219 245-331 (365)
58 cd03820 GT1_amsD_like This fam 97.8 0.00023 5E-09 62.3 11.7 80 128-219 235-320 (348)
59 cd03794 GT1_wbuB_like This fam 97.8 0.00047 1E-08 61.4 13.9 81 127-219 274-366 (394)
60 cd05844 GT1_like_7 Glycosyltra 97.8 0.0003 6.5E-09 63.5 12.1 80 128-219 245-337 (367)
61 cd03804 GT1_wbaZ_like This fam 97.8 0.00013 2.9E-09 65.8 9.8 127 57-219 197-327 (351)
62 PLN02871 UDP-sulfoquinovose:DA 97.8 0.00049 1.1E-08 65.2 14.0 138 56-230 264-413 (465)
63 cd03798 GT1_wlbH_like This fam 97.8 0.0025 5.4E-08 56.2 17.8 81 127-219 258-345 (377)
64 cd03808 GT1_cap1E_like This fa 97.8 0.00083 1.8E-08 59.1 14.4 80 128-219 246-330 (359)
65 cd04946 GT1_AmsK_like This fam 97.8 0.00051 1.1E-08 64.0 13.6 84 127-219 288-378 (407)
66 cd04962 GT1_like_5 This family 97.7 0.0035 7.7E-08 56.5 17.9 92 128-231 253-350 (371)
67 PRK15484 lipopolysaccharide 1, 97.7 0.0094 2E-07 55.0 20.7 81 128-219 257-345 (380)
68 cd03799 GT1_amsK_like This is 97.7 0.00074 1.6E-08 60.3 13.0 81 127-219 235-328 (355)
69 cd04949 GT1_gtfA_like This fam 97.7 0.00036 7.9E-09 63.4 10.8 98 128-234 261-362 (372)
70 COG5017 Uncharacterized conser 97.7 0.00054 1.2E-08 53.7 9.9 66 130-198 48-124 (161)
71 PRK14089 ipid-A-disaccharide s 97.7 0.00035 7.5E-09 63.9 10.1 86 138-235 229-332 (347)
72 TIGR03088 stp2 sugar transfera 97.7 0.00078 1.7E-08 61.4 12.4 79 129-219 256-339 (374)
73 PRK09922 UDP-D-galactose:(gluc 97.6 0.0011 2.5E-08 60.3 13.2 81 128-220 236-326 (359)
74 PF13844 Glyco_transf_41: Glyc 97.6 0.00056 1.2E-08 64.6 11.0 141 53-219 283-431 (468)
75 COG1519 KdtA 3-deoxy-D-manno-o 97.6 0.0074 1.6E-07 55.9 17.8 201 19-236 195-405 (419)
76 cd03822 GT1_ecORF704_like This 97.6 0.002 4.3E-08 57.4 13.8 79 128-219 247-335 (366)
77 PRK10307 putative glycosyl tra 97.5 0.002 4.2E-08 59.8 13.3 116 128-260 284-409 (412)
78 cd03811 GT1_WabH_like This fam 97.5 0.0031 6.7E-08 55.2 13.8 80 128-219 246-333 (353)
79 cd03807 GT1_WbnK_like This fam 97.5 0.0027 6E-08 56.0 13.4 77 129-219 252-333 (365)
80 KOG4626 O-linked N-acetylgluco 97.5 0.0013 2.9E-08 63.2 11.1 154 19-197 723-889 (966)
81 cd04951 GT1_WbdM_like This fam 97.4 0.0017 3.6E-08 58.1 11.5 77 128-218 245-326 (360)
82 cd03821 GT1_Bme6_like This fam 97.4 0.0046 1E-07 54.7 13.9 81 127-219 261-346 (375)
83 TIGR03449 mycothiol_MshA UDP-N 97.4 0.0056 1.2E-07 56.4 14.3 91 128-230 283-381 (405)
84 TIGR02149 glgA_Coryne glycogen 97.3 0.0056 1.2E-07 55.8 13.9 84 129-219 261-353 (388)
85 cd03816 GT1_ALG1_like This fam 97.3 0.0023 5E-08 59.8 11.1 90 129-232 295-399 (415)
86 TIGR03087 stp1 sugar transfera 97.3 0.0061 1.3E-07 56.3 13.3 90 127-230 279-375 (397)
87 cd03819 GT1_WavL_like This fam 97.3 0.013 2.8E-07 52.4 14.9 95 128-232 246-346 (355)
88 cd03809 GT1_mtfB_like This fam 97.2 0.018 3.9E-07 51.1 15.5 81 127-219 252-337 (365)
89 cd03805 GT1_ALG2_like This fam 97.2 0.0089 1.9E-07 54.5 12.9 90 128-230 280-377 (392)
90 PF13692 Glyco_trans_1_4: Glyc 97.1 0.0012 2.6E-08 51.1 5.9 80 127-218 52-135 (135)
91 PRK10017 colanic acid biosynth 97.0 0.05 1.1E-06 51.2 16.9 184 44-257 224-423 (426)
92 cd03818 GT1_ExpC_like This fam 97.0 0.0047 1E-07 57.0 9.6 94 127-230 280-379 (396)
93 TIGR02918 accessory Sec system 97.0 0.0075 1.6E-07 57.9 11.2 101 128-234 376-483 (500)
94 PF02684 LpxB: Lipid-A-disacch 97.0 0.02 4.3E-07 53.0 13.4 205 9-249 146-368 (373)
95 cd03813 GT1_like_3 This family 96.9 0.0073 1.6E-07 57.4 10.7 80 128-219 354-443 (475)
96 PF06722 DUF1205: Protein of u 96.9 0.00079 1.7E-08 50.1 3.1 55 41-95 27-86 (97)
97 cd03812 GT1_CapH_like This fam 96.9 0.01 2.2E-07 53.1 10.9 79 128-219 249-332 (358)
98 cd04955 GT1_like_6 This family 96.9 0.026 5.6E-07 50.5 13.0 77 127-219 247-331 (363)
99 PRK09814 beta-1,6-galactofuran 96.8 0.0058 1.3E-07 55.4 8.4 109 128-254 207-331 (333)
100 PF02350 Epimerase_2: UDP-N-ac 96.7 0.0099 2.1E-07 54.4 9.4 162 21-218 144-318 (346)
101 PRK15179 Vi polysaccharide bio 96.6 0.03 6.5E-07 55.9 12.0 94 128-231 574-673 (694)
102 cd03796 GT1_PIG-A_like This fa 96.5 0.078 1.7E-06 48.9 13.7 78 128-219 250-334 (398)
103 PHA01633 putative glycosyl tra 96.4 0.064 1.4E-06 48.9 12.5 83 129-218 202-307 (335)
104 cd03792 GT1_Trehalose_phosphor 96.2 0.23 5E-06 45.2 14.8 78 128-219 252-338 (372)
105 cd03802 GT1_AviGT4_like This f 96.1 0.052 1.1E-06 48.0 10.1 129 57-218 173-308 (335)
106 PRK01021 lpxB lipid-A-disaccha 96.1 0.45 9.8E-06 46.5 16.7 194 9-235 374-589 (608)
107 cd04950 GT1_like_1 Glycosyltra 96.0 0.31 6.8E-06 44.6 15.1 79 127-219 253-341 (373)
108 COG3914 Spy Predicted O-linked 96.0 0.11 2.5E-06 49.9 12.0 138 52-213 427-573 (620)
109 TIGR02472 sucr_P_syn_N sucrose 96.0 0.037 7.9E-07 52.1 8.8 80 128-219 317-407 (439)
110 TIGR02095 glgA glycogen/starch 95.9 0.17 3.6E-06 48.0 13.1 78 129-217 347-436 (473)
111 TIGR03568 NeuC_NnaA UDP-N-acet 95.9 0.1 2.3E-06 48.0 11.1 162 23-217 168-338 (365)
112 TIGR02468 sucrsPsyn_pln sucros 95.6 0.29 6.3E-06 50.8 14.1 93 128-230 548-650 (1050)
113 PLN02275 transferase, transfer 95.6 0.12 2.7E-06 47.3 10.4 75 128-216 286-371 (371)
114 cd03791 GT1_Glycogen_synthase_ 95.6 0.15 3.3E-06 48.1 11.3 70 140-217 366-441 (476)
115 PRK14098 glycogen synthase; Pr 95.6 0.27 5.9E-06 47.1 13.0 79 128-216 362-449 (489)
116 PRK15490 Vi polysaccharide bio 95.1 0.36 7.8E-06 46.9 12.2 73 128-212 455-532 (578)
117 PLN02949 transferase, transfer 95.0 0.24 5.2E-06 47.2 10.6 115 128-262 335-460 (463)
118 PRK00654 glgA glycogen synthas 95.0 0.44 9.5E-06 45.2 12.4 70 140-217 352-427 (466)
119 COG0763 LpxB Lipid A disacchar 94.7 0.62 1.3E-05 42.9 11.9 205 20-256 155-379 (381)
120 PF13524 Glyco_trans_1_2: Glyc 94.6 0.27 5.8E-06 35.4 7.8 82 153-253 9-91 (92)
121 cd03806 GT1_ALG11_like This fa 94.3 0.21 4.6E-06 46.7 8.5 79 128-219 305-393 (419)
122 PHA01630 putative group 1 glyc 94.2 3.6 7.9E-05 37.3 16.0 86 139-230 204-306 (331)
123 PLN02316 synthase/transferase 93.8 1.9 4.1E-05 45.0 14.5 118 129-258 901-1033(1036)
124 TIGR03713 acc_sec_asp1 accesso 93.4 0.49 1.1E-05 45.8 9.1 91 129-236 410-507 (519)
125 PLN02846 digalactosyldiacylgly 93.3 0.87 1.9E-05 43.4 10.5 73 132-219 288-364 (462)
126 PRK10125 putative glycosyl tra 93.3 2.7 5.9E-05 39.2 13.8 61 139-212 301-365 (405)
127 PF04007 DUF354: Protein of un 93.3 3.6 7.9E-05 37.5 14.1 139 40-217 166-309 (335)
128 PLN02939 transferase, transfer 93.2 1.2 2.7E-05 45.8 11.9 83 128-217 837-930 (977)
129 TIGR02400 trehalose_OtsA alpha 92.7 1.3 2.8E-05 42.2 10.7 104 133-257 341-455 (456)
130 TIGR02193 heptsyl_trn_I lipopo 91.3 0.87 1.9E-05 40.7 7.6 144 46-216 171-319 (319)
131 PF06258 Mito_fiss_Elm1: Mitoc 90.2 8.1 0.00018 34.9 12.8 59 137-197 221-282 (311)
132 TIGR02919 accessory Sec system 88.9 5.6 0.00012 37.7 11.1 93 128-234 328-425 (438)
133 COG0381 WecB UDP-N-acetylgluco 88.9 0.72 1.6E-05 42.6 4.9 89 128-233 262-353 (383)
134 PLN02501 digalactosyldiacylgly 88.4 2.9 6.2E-05 42.0 9.0 75 130-219 603-682 (794)
135 cd01635 Glycosyltransferase_GT 87.5 2 4.3E-05 35.0 6.5 48 127-176 160-215 (229)
136 cd03793 GT1_Glycogen_synthase_ 87.3 2.9 6.3E-05 40.9 8.2 81 138-219 468-553 (590)
137 PLN03063 alpha,alpha-trehalose 86.4 3.5 7.6E-05 42.1 8.7 101 139-260 370-479 (797)
138 TIGR02470 sucr_synth sucrose s 83.3 4.6 9.9E-05 41.0 7.7 51 156-216 657-707 (784)
139 PLN00142 sucrose synthase 83.1 4.8 0.0001 41.1 7.8 58 149-216 669-730 (815)
140 PRK14099 glycogen synthase; Pr 82.9 21 0.00046 34.1 11.9 82 131-219 354-448 (485)
141 cd03789 GT1_LPS_heptosyltransf 80.1 4.5 9.8E-05 35.3 5.8 96 54-172 121-223 (279)
142 TIGR02201 heptsyl_trn_III lipo 78.9 9 0.00019 34.6 7.6 106 46-172 172-285 (344)
143 COG0438 RfaG Glycosyltransfera 78.5 40 0.00086 28.5 13.5 80 128-219 257-343 (381)
144 COG4370 Uncharacterized protei 77.0 4.5 9.7E-05 36.5 4.7 84 135-229 302-387 (412)
145 cd03788 GT1_TPS Trehalose-6-Ph 76.9 10 0.00023 35.9 7.6 104 132-256 345-459 (460)
146 PF05159 Capsule_synth: Capsul 76.9 22 0.00049 30.9 9.3 42 130-174 185-226 (269)
147 PF00731 AIRC: AIR carboxylase 76.7 29 0.00062 27.9 8.9 141 55-237 1-148 (150)
148 PRK10964 ADP-heptose:LPS hepto 75.3 6.5 0.00014 35.2 5.5 95 54-172 178-278 (322)
149 PRK10422 lipopolysaccharide co 73.1 18 0.00038 32.9 7.9 99 53-172 182-287 (352)
150 TIGR02195 heptsyl_trn_II lipop 72.1 23 0.0005 31.7 8.4 96 53-172 173-276 (334)
151 PF01075 Glyco_transf_9: Glyco 71.2 6.8 0.00015 33.3 4.5 99 53-172 104-208 (247)
152 TIGR02398 gluc_glyc_Psyn gluco 70.3 1.1E+02 0.0023 29.6 13.1 109 130-258 364-482 (487)
153 PF07429 Glyco_transf_56: 4-al 68.7 49 0.0011 30.4 9.4 82 128-217 245-332 (360)
154 PRK10916 ADP-heptose:LPS hepto 68.1 16 0.00034 33.1 6.4 97 53-172 179-286 (348)
155 PF04464 Glyphos_transf: CDP-G 67.8 6.1 0.00013 36.0 3.7 99 128-237 252-353 (369)
156 PRK12446 undecaprenyldiphospho 66.9 8.9 0.00019 35.0 4.5 97 55-172 3-120 (352)
157 PRK06718 precorrin-2 dehydroge 66.7 35 0.00077 28.6 7.8 102 130-239 56-166 (202)
158 PRK14501 putative bifunctional 66.4 13 0.00029 37.4 6.0 111 132-259 346-463 (726)
159 PRK04885 ppnK inorganic polyph 65.3 15 0.00032 32.4 5.4 53 144-218 35-93 (265)
160 PRK02797 4-alpha-L-fucosyltran 64.2 45 0.00098 30.2 8.2 80 129-216 207-292 (322)
161 COG3660 Predicted nucleoside-d 62.7 86 0.0019 27.9 9.4 37 134-172 234-271 (329)
162 PF06506 PrpR_N: Propionate ca 62.2 7.6 0.00017 31.7 2.9 31 145-176 33-63 (176)
163 PLN02929 NADH kinase 61.2 12 0.00026 33.7 4.1 67 143-219 63-138 (301)
164 PRK01231 ppnK inorganic polyph 60.2 72 0.0016 28.5 8.9 54 144-219 62-119 (295)
165 PRK14077 pnk inorganic polypho 59.8 22 0.00048 31.7 5.6 55 143-219 63-121 (287)
166 PF05693 Glycogen_syn: Glycoge 58.9 14 0.0003 36.4 4.3 94 137-235 462-566 (633)
167 PRK02155 ppnK NAD(+)/NADH kina 58.7 25 0.00054 31.4 5.7 55 143-219 62-120 (291)
168 COG3195 Uncharacterized protei 57.6 66 0.0014 26.3 7.3 75 157-236 88-164 (176)
169 PRK03372 ppnK inorganic polyph 57.0 30 0.00064 31.2 5.9 55 143-219 71-129 (306)
170 PRK02649 ppnK inorganic polyph 54.9 28 0.0006 31.3 5.4 55 143-219 67-125 (305)
171 COG0859 RfaF ADP-heptose:LPS h 53.9 33 0.00072 31.0 5.8 94 54-172 175-276 (334)
172 PRK01911 ppnK inorganic polyph 53.4 30 0.00066 30.9 5.4 56 142-219 62-121 (292)
173 PLN02470 acetolactate synthase 52.5 28 0.00061 34.1 5.4 28 146-173 76-109 (585)
174 PRK04539 ppnK inorganic polyph 52.1 36 0.00078 30.5 5.6 54 143-218 67-124 (296)
175 PLN02935 Bifunctional NADH kin 51.4 42 0.0009 32.4 6.1 55 143-219 261-319 (508)
176 PRK03378 ppnK inorganic polyph 50.9 33 0.00072 30.6 5.2 55 143-219 62-120 (292)
177 COG1698 Uncharacterized protei 49.3 77 0.0017 23.1 5.8 56 206-264 16-72 (93)
178 PRK03708 ppnK inorganic polyph 48.4 33 0.00071 30.4 4.7 53 144-218 57-112 (277)
179 KOG0853 Glycosyltransferase [C 48.2 8.8 0.00019 36.8 1.1 63 157-230 380-442 (495)
180 COG0801 FolK 7,8-dihydro-6-hyd 47.2 44 0.00095 27.2 4.8 29 56-84 3-31 (160)
181 PRK02231 ppnK inorganic polyph 47.2 51 0.0011 29.2 5.7 57 139-217 37-97 (272)
182 cd01840 SGNH_hydrolase_yrhL_li 45.6 73 0.0016 24.8 6.0 44 48-92 45-88 (150)
183 PRK03501 ppnK inorganic polyph 44.6 54 0.0012 28.9 5.4 55 144-219 39-98 (264)
184 PRK01185 ppnK inorganic polyph 43.8 47 0.001 29.3 5.0 54 144-219 52-106 (271)
185 TIGR00521 coaBC_dfp phosphopan 43.2 2.6E+02 0.0056 26.1 10.0 54 163-217 109-178 (390)
186 PRK04761 ppnK inorganic polyph 43.1 58 0.0013 28.4 5.3 28 145-174 26-57 (246)
187 PRK14075 pnk inorganic polypho 42.7 56 0.0012 28.5 5.3 53 144-218 41-94 (256)
188 TIGR01470 cysG_Nterm siroheme 42.0 2.1E+02 0.0045 24.0 8.8 93 139-239 64-166 (205)
189 PRK08322 acetolactate synthase 40.4 79 0.0017 30.6 6.4 27 147-173 64-96 (547)
190 cd07038 TPP_PYR_PDC_IPDC_like 40.0 54 0.0012 26.3 4.5 26 149-174 62-93 (162)
191 cd07039 TPP_PYR_POX Pyrimidine 39.7 71 0.0015 25.7 5.1 27 148-174 65-97 (164)
192 PLN02948 phosphoribosylaminoim 38.7 3.9E+02 0.0085 26.3 10.9 144 53-240 409-561 (577)
193 PF08030 NAD_binding_6: Ferric 38.6 22 0.00047 27.8 1.9 40 55-94 3-47 (156)
194 PRK05579 bifunctional phosphop 38.4 3.4E+02 0.0073 25.4 10.1 68 149-217 86-182 (399)
195 TIGR03164 UHCUDC OHCU decarbox 38.0 2.1E+02 0.0046 23.0 7.6 55 178-236 97-151 (157)
196 PRK14076 pnk inorganic polypho 37.7 62 0.0014 31.8 5.2 54 144-219 348-405 (569)
197 PF06180 CbiK: Cobalt chelatas 36.9 57 0.0012 28.7 4.4 38 55-92 2-42 (262)
198 COG0297 GlgA Glycogen synthase 36.6 1.7E+02 0.0036 28.3 7.8 93 154-260 381-479 (487)
199 PRK06276 acetolactate synthase 36.4 1E+02 0.0022 30.2 6.6 26 148-173 65-96 (586)
200 PRK13798 putative OHCU decarbo 36.4 2.3E+02 0.0051 23.0 7.6 55 178-236 102-156 (166)
201 PRK07313 phosphopantothenoylcy 35.5 2.5E+02 0.0054 23.1 12.1 54 163-217 108-179 (182)
202 PF13499 EF-hand_7: EF-hand do 35.1 27 0.00058 23.0 1.6 56 196-255 10-65 (66)
203 PRK08155 acetolactate synthase 34.8 88 0.0019 30.4 5.8 25 149-173 79-109 (564)
204 PRK13982 bifunctional SbtC-lik 33.4 4.5E+02 0.0097 25.3 12.5 55 162-217 176-247 (475)
205 PRK06242 flavodoxin; Provision 33.1 1.4E+02 0.003 23.1 5.7 60 23-87 46-106 (150)
206 KOG2941 Beta-1,4-mannosyltrans 32.2 4.2E+02 0.0092 24.7 11.8 87 133-231 324-423 (444)
207 COG2159 Predicted metal-depend 31.7 1.9E+02 0.004 25.8 6.9 70 24-93 98-167 (293)
208 TIGR00725 conserved hypothetic 31.4 38 0.00083 27.3 2.2 39 136-174 82-123 (159)
209 PRK11914 diacylglycerol kinase 31.1 1.2E+02 0.0026 26.9 5.6 26 149-174 67-96 (306)
210 COG2987 HutU Urocanate hydrata 30.5 43 0.00094 31.8 2.6 40 132-171 467-508 (561)
211 cd07025 Peptidase_S66 LD-Carbo 30.2 1.1E+02 0.0023 27.1 5.0 74 66-174 45-120 (282)
212 PLN03064 alpha,alpha-trehalose 30.0 2.8E+02 0.006 29.2 8.6 102 139-260 454-563 (934)
213 TIGR03180 UraD_2 OHCU decarbox 29.7 3E+02 0.0065 22.1 7.6 55 178-236 97-151 (158)
214 COG3200 AroG 3-deoxy-D-arabino 29.5 1.6E+02 0.0036 27.1 6.0 76 3-93 271-351 (445)
215 cd07035 TPP_PYR_POX_like Pyrim 29.5 2E+02 0.0043 22.3 6.2 26 149-174 62-93 (155)
216 PRK14092 2-amino-4-hydroxy-6-h 28.9 1.2E+02 0.0027 24.6 4.8 32 52-83 5-36 (163)
217 TIGR00147 lipid kinase, YegS/R 28.7 2.1E+02 0.0046 25.0 6.8 26 149-174 60-91 (293)
218 TIGR03609 S_layer_CsaB polysac 28.5 3.3E+02 0.0072 23.7 8.0 46 139-191 245-290 (298)
219 PF03685 UPF0147: Uncharacteri 28.2 2.3E+02 0.005 20.4 6.1 56 206-264 9-65 (85)
220 PRK08199 thiamine pyrophosphat 27.4 2.4E+02 0.0052 27.4 7.4 27 147-173 72-104 (557)
221 cd06533 Glyco_transf_WecG_TagA 27.4 3E+02 0.0065 22.2 6.9 65 20-92 69-133 (171)
222 TIGR02302 aProt_lowcomp conser 27.0 2E+02 0.0044 29.8 6.9 58 204-262 475-538 (851)
223 cd07037 TPP_PYR_MenD Pyrimidin 26.9 56 0.0012 26.4 2.5 26 149-174 63-94 (162)
224 cd03412 CbiK_N Anaerobic cobal 26.7 1.2E+02 0.0026 23.3 4.2 37 55-91 2-40 (127)
225 TIGR03646 YtoQ_fam YtoQ family 26.6 3.2E+02 0.007 21.6 8.8 63 137-216 68-143 (144)
226 PRK15062 hydrogenase isoenzyme 26.3 2.3E+02 0.005 26.2 6.5 24 43-66 120-143 (364)
227 COG3563 KpsC Capsule polysacch 25.5 4.2E+02 0.0091 25.8 8.1 86 69-174 166-252 (671)
228 PRK04330 hypothetical protein; 25.5 2.7E+02 0.0058 20.2 5.5 55 207-264 13-68 (88)
229 PRK10637 cysG siroheme synthas 25.5 3.1E+02 0.0067 26.0 7.6 152 53-239 12-169 (457)
230 PRK05340 UDP-2,3-diacylglucosa 25.3 2.1E+02 0.0045 24.3 5.9 70 24-94 3-81 (241)
231 PF03033 Glyco_transf_28: Glyc 25.0 93 0.002 23.5 3.4 35 56-92 1-35 (139)
232 COG0352 ThiE Thiamine monophos 23.4 4.6E+02 0.0099 22.2 7.5 61 22-91 125-187 (211)
233 PF09349 OHCU_decarbox: OHCU d 23.4 3.6E+02 0.0077 21.6 6.6 54 179-236 101-154 (159)
234 TIGR00173 menD 2-succinyl-5-en 23.1 1.5E+02 0.0033 27.7 5.0 24 149-172 66-95 (432)
235 PLN02727 NAD kinase 23.1 1.7E+02 0.0036 30.7 5.4 55 143-219 742-800 (986)
236 PF03693 RHH_2: Uncharacterise 23.1 1.7E+02 0.0036 20.7 4.0 50 205-260 30-79 (80)
237 PF00982 Glyco_transf_20: Glyc 22.9 3.7E+02 0.008 25.8 7.6 101 139-258 367-474 (474)
238 PRK15424 propionate catabolism 22.8 2.6E+02 0.0057 27.3 6.6 30 144-176 64-93 (538)
239 PRK14116 gpmA phosphoglyceromu 22.6 46 0.001 28.3 1.3 22 148-169 177-198 (228)
240 PRK07525 sulfoacetaldehyde ace 22.6 1.6E+02 0.0034 28.9 5.2 27 147-173 69-101 (588)
241 TIGR02836 spore_IV_A stage IV 22.5 3.6E+02 0.0078 25.9 7.1 88 127-217 114-234 (492)
242 KOG0100 Molecular chaperones G 22.2 1.1E+02 0.0024 29.0 3.6 65 165-236 499-567 (663)
243 PF05225 HTH_psq: helix-turn-h 22.1 1.8E+02 0.0038 18.0 3.6 26 204-231 1-26 (45)
244 PRK02645 ppnK inorganic polyph 21.8 89 0.0019 28.0 3.0 29 144-174 57-89 (305)
245 TIGR02329 propionate_PrpR prop 21.8 2.9E+02 0.0063 26.9 6.7 30 144-176 54-83 (526)
246 PRK06932 glycerate dehydrogena 21.6 3.8E+02 0.0082 24.0 7.1 58 135-213 188-248 (314)
247 PRK13337 putative lipid kinase 21.5 3.1E+02 0.0068 24.2 6.5 26 149-174 60-91 (304)
248 TIGR03754 conj_TOL_TraD conjug 21.5 1.1E+02 0.0024 30.6 3.7 27 40-66 425-451 (643)
249 TIGR02482 PFKA_ATP 6-phosphofr 21.3 78 0.0017 28.4 2.5 37 141-177 86-126 (301)
250 PF14606 Lipase_GDSL_3: GDSL-l 20.7 4.9E+02 0.011 21.5 7.1 49 2-60 46-100 (178)
251 PRK13463 phosphatase PhoE; Pro 20.6 58 0.0013 27.0 1.5 23 148-170 146-168 (203)
252 PRK07449 2-succinyl-5-enolpyru 20.5 2.1E+02 0.0045 27.8 5.5 26 149-174 75-106 (568)
253 PF10897 DUF2713: Protein of u 20.3 1.9E+02 0.0041 24.5 4.3 48 203-261 145-192 (246)
254 PF13779 DUF4175: Domain of un 20.2 3E+02 0.0064 28.5 6.6 59 203-262 443-507 (820)
No 1
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=3.9e-48 Score=363.72 Aligned_cols=258 Identities=45% Similarity=0.821 Sum_probs=210.6
Q ss_pred CCCcHHHHHHHHhh--hhccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHH
Q 042249 1 MDLEPGAFKALMKS--RESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALG 78 (264)
Q Consensus 1 ~~~~~~~~~~~~~~--~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~a 78 (264)
+|||+++++++++. +...+ .+.++.|||++...... ..++++.+||+++++++||||||||...++.+++.+++.+
T Consensus 210 ~eLE~~~l~~l~~~~~~~~~~-~~~v~~VGPl~~~~~~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~g 287 (481)
T PLN02992 210 EEMEPKSLKSLQDPKLLGRVA-RVPVYPIGPLCRPIQSS-KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWG 287 (481)
T ss_pred HHHhHHHHHHHhhcccccccc-CCceEEecCccCCcCCC-cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHH
Confidence 48999999999862 11011 24699999998642221 2456799999999889999999999999999999999999
Q ss_pred HHhcCCeEEEEEeCCCcccccccccccCC-CCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCch
Q 042249 79 LEMSGQRFLWVVKCPDEKATNATYFGVHG-MKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWN 157 (264)
Q Consensus 79 l~~~~~~viw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~ 157 (264)
|+.++++|||+++.+........++.... ...+.....+|++|.++++++|+++.+|+||.+||+|+++++||||||||
T Consensus 288 L~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~n 367 (481)
T PLN02992 288 LEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWS 367 (481)
T ss_pred HHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchh
Confidence 99999999999975321000000111000 00001123589999999999999999999999999999999999999999
Q ss_pred hHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHh
Q 042249 158 SVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAAN 237 (264)
Q Consensus 158 si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~ 237 (264)
|++||+++|||||++|+++||+.||+++++++|+|+.+... ++.+++++|.++|+++|.+++++.+|++++++++++++
T Consensus 368 S~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~ 446 (481)
T PLN02992 368 STLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEM 446 (481)
T ss_pred HHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996339999999752 13489999999999999887888999999999999999
Q ss_pred hcC--CCCChHHHHHHHHHHHHhhhc
Q 042249 238 ALS--PDGFSTKSLANVAQKWKNLEN 261 (264)
Q Consensus 238 a~~--~gg~~~~~~~~~~~~~~~~~~ 261 (264)
|+. +||||+.++++|+++++++-+
T Consensus 447 Av~~~~GGSS~~~l~~~v~~~~~~~~ 472 (481)
T PLN02992 447 SLSIDGGGVAHESLCRVTKECQRFLE 472 (481)
T ss_pred HhcCCCCCchHHHHHHHHHHHHHHHH
Confidence 994 699999999999999998754
No 2
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1e-47 Score=359.61 Aligned_cols=236 Identities=36% Similarity=0.614 Sum_probs=203.4
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCC--CC-CCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGS--IN-ESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELAL 77 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~--~~-~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~ 77 (264)
+|||+++++++++.+ . +++++|||++.... .+ ...+.++.+||+.+++++||||||||...++.+++.+++.
T Consensus 213 ~eLE~~~~~~l~~~~----~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~ 287 (451)
T PLN02410 213 SCLESSSLSRLQQQL----Q-IPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETAS 287 (451)
T ss_pred HHhhHHHHHHHHhcc----C-CCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHH
Confidence 489999999998832 3 47999999985422 11 1233568999999999999999999999999999999999
Q ss_pred HHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCch
Q 042249 78 GLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWN 157 (264)
Q Consensus 78 al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~ 157 (264)
+|+..+.+|||+++..... +. +....+|++|.++.++++ ++.+|+||.+||+|+++++||||||||
T Consensus 288 gLe~s~~~FlWv~r~~~~~--------~~-----~~~~~lp~~f~er~~~~g-~v~~w~PQ~~iL~h~~v~~fvtH~G~n 353 (451)
T PLN02410 288 GLDSSNQQFLWVIRPGSVR--------GS-----EWIESLPKEFSKIISGRG-YIVKWAPQKEVLSHPAVGGFWSHCGWN 353 (451)
T ss_pred HHHhcCCCeEEEEccCccc--------cc-----chhhcCChhHHHhccCCe-EEEccCCHHHHhCCCccCeeeecCchh
Confidence 9999999999999853210 00 111248999998887655 566899999999999999999999999
Q ss_pred hHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHh
Q 042249 158 SVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAAN 237 (264)
Q Consensus 158 si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~ 237 (264)
|++||+++|||||++|++.||+.||+++++.+|+|+.+. .. +++++|+++|+++|.++++++||+++++|++++++
T Consensus 354 S~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~---~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~ 429 (451)
T PLN02410 354 STLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GD---LDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRA 429 (451)
T ss_pred HHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-Cc---ccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998569999997 33 89999999999999887788999999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHhh
Q 042249 238 ALSPDGFSTKSLANVAQKWKNL 259 (264)
Q Consensus 238 a~~~gg~~~~~~~~~~~~~~~~ 259 (264)
|+.+||||+.++++|++.|+.+
T Consensus 430 a~~~gGsS~~~l~~fv~~~~~~ 451 (451)
T PLN02410 430 SVISGGSSHNSLEEFVHFMRTL 451 (451)
T ss_pred HhcCCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999998764
No 3
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.2e-47 Score=358.95 Aligned_cols=248 Identities=46% Similarity=0.797 Sum_probs=206.1
Q ss_pred CCCcHHHHHHHHhhh--hccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHH
Q 042249 1 MDLEPGAFKALMKSR--ESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALG 78 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~--~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~a 78 (264)
+|||+++++++++.+ ..+. .|.+++|||++...... ..++++.+||+.+++++||||||||...++.+++.+++.+
T Consensus 214 ~eLE~~~~~~l~~~~~~~~~~-~~~v~~VGPl~~~~~~~-~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~g 291 (470)
T PLN03015 214 EELQGNTLAALREDMELNRVM-KVPVYPIGPIVRTNVHV-EKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWG 291 (470)
T ss_pred HHHhHHHHHHHHhhccccccc-CCceEEecCCCCCcccc-cchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHH
Confidence 489999999998731 0001 24699999998532211 2345799999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEEeCCCcccccccccccCCCCC-CCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCch
Q 042249 79 LEMSGQRFLWVVKCPDEKATNATYFGVHGMKE-ENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWN 157 (264)
Q Consensus 79 l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~ 157 (264)
|+.++++|||+++.+... .+....+ ++....+|++|.++++++++++.+|+||.+||+|+++++||||||||
T Consensus 292 l~~s~~~FlWv~r~~~~~-------~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~Gwn 364 (470)
T PLN03015 292 LELSGQRFVWVLRRPASY-------LGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWS 364 (470)
T ss_pred HHhCCCcEEEEEecCccc-------cccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCch
Confidence 999999999999753210 0000000 01123589999999999999999999999999999999999999999
Q ss_pred hHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeec-cCCCCCCHHHHHHHHHHHhcC--CchHHHHHHHHHHHHH
Q 042249 158 SVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKV-NEDGLVGREEVATYARGLIQG--EDGKLLRDKMRVLKDA 234 (264)
Q Consensus 158 si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~~~~~l~~ai~~ll~~--~~~~~~r~~a~~l~~~ 234 (264)
|++||+++|||||++|+++||+.||+++++++|+|+.+.. ...+.+++++|.++|+++|.+ ++|+++|+||++|+++
T Consensus 365 S~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~ 444 (470)
T PLN03015 365 SVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVS 444 (470)
T ss_pred hHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999766999999952 122358999999999999963 5689999999999999
Q ss_pred HHhhcCCCCChHHHHHHHHHHHH
Q 042249 235 AANALSPDGFSTKSLANVAQKWK 257 (264)
Q Consensus 235 ~~~a~~~gg~~~~~~~~~~~~~~ 257 (264)
+++|+++||||+.++++|+..+.
T Consensus 445 a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 445 SERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred HHHHhcCCCcHHHHHHHHHHhcc
Confidence 99999999999999999998873
No 4
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.7e-47 Score=358.67 Aligned_cols=237 Identities=38% Similarity=0.766 Sum_probs=201.4
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCCCC-----CChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSINE-----SDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNEL 75 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~-----~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l 75 (264)
++||+++++++++. . ..|+++.|||++....... ..++++.+||++++++++|||||||...++.+++.++
T Consensus 221 ~~LE~~~~~~~~~~-~---~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~el 296 (468)
T PLN02207 221 FDIEPYSVNHFLDE-Q---NYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEI 296 (468)
T ss_pred HHHhHHHHHHHHhc-c---CCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHH
Confidence 47999999999751 1 3578999999986332111 1236799999999889999999999999999999999
Q ss_pred HHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccC
Q 042249 76 ALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCG 155 (264)
Q Consensus 76 ~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG 155 (264)
+.+|+.++++|||+++.... .....+|++|.++.++++ .+.+|+||.+||+|+++++||||||
T Consensus 297 a~~l~~~~~~flW~~r~~~~----------------~~~~~lp~~f~er~~~~g-~i~~W~PQ~~IL~H~~vg~FvTH~G 359 (468)
T PLN02207 297 AHGLELCQYRFLWSLRTEEV----------------TNDDLLPEGFLDRVSGRG-MICGWSPQVEILAHKAVGGFVSHCG 359 (468)
T ss_pred HHHHHHCCCcEEEEEeCCCc----------------cccccCCHHHHhhcCCCe-EEEEeCCHHHHhcccccceeeecCc
Confidence 99999999999999985321 111358899988877554 5679999999999999999999999
Q ss_pred chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc----CCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 042249 156 WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN----EDGLVGREEVATYARGLIQGEDGKLLRDKMRVL 231 (264)
Q Consensus 156 ~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~----~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l 231 (264)
|||++||+++|||||++|+++||+.||+++++++|+|+.+..+ .++.+++++|.++|+++|.+ ++++||+||++|
T Consensus 360 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l 438 (468)
T PLN02207 360 WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDI 438 (468)
T ss_pred cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHH
Confidence 9999999999999999999999999999888779999987421 12346999999999999973 467999999999
Q ss_pred HHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 042249 232 KDAAANALSPDGFSTKSLANVAQKWKNL 259 (264)
Q Consensus 232 ~~~~~~a~~~gg~~~~~~~~~~~~~~~~ 259 (264)
++.+++|+++||||+.++++|++++...
T Consensus 439 ~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 439 SQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999864
No 5
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.4e-47 Score=359.98 Aligned_cols=252 Identities=43% Similarity=0.796 Sum_probs=208.1
Q ss_pred CCCcHHHHHHHHhhh-hccCCCCCeEeecccccCC--CCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHH
Q 042249 1 MDLEPGAFKALMKSR-ESSFRLPPVYPVGPLILTG--SINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELAL 77 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~p~~~~vGpl~~~~--~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~ 77 (264)
+|||+++++++++.. ...+..|+++.|||++... ......++++.+||+++++++||||||||...++.+++.+++.
T Consensus 216 ~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~ 295 (480)
T PLN00164 216 AELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAA 295 (480)
T ss_pred HHhhHHHHHHHHhccccccCCCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHH
Confidence 489999999998742 0001136899999997421 1122346789999999999999999999998899999999999
Q ss_pred HHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCch
Q 042249 78 GLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWN 157 (264)
Q Consensus 78 al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~ 157 (264)
+|+.++.+|||+++.+.... ...+.+. +....+|++|.++++++++++.+|+||.+||+|+++++||||||||
T Consensus 296 gL~~s~~~flWv~~~~~~~~----~~~~~~~---~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~Gwn 368 (480)
T PLN00164 296 GLERSGHRFLWVLRGPPAAG----SRHPTDA---DLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWN 368 (480)
T ss_pred HHHHcCCCEEEEEcCCcccc----ccccccc---chhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccc
Confidence 99999999999998542100 0000000 1112488999999999999999999999999999999999999999
Q ss_pred hHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC--CCCCCHHHHHHHHHHHhcCC--chHHHHHHHHHHHH
Q 042249 158 SVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE--DGLVGREEVATYARGLIQGE--DGKLLRDKMRVLKD 233 (264)
Q Consensus 158 si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~--~~~~~~~~l~~ai~~ll~~~--~~~~~r~~a~~l~~ 233 (264)
|++||+++|||||++|+++||+.||+++++++|+|+.+.... ++.+++++|.++|+++|.++ +++.+|++|+++++
T Consensus 369 S~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~ 448 (480)
T PLN00164 369 SVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKA 448 (480)
T ss_pred hHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999998866599999986431 23579999999999999864 48899999999999
Q ss_pred HHHhhcCCCCChHHHHHHHHHHHHhh
Q 042249 234 AAANALSPDGFSTKSLANVAQKWKNL 259 (264)
Q Consensus 234 ~~~~a~~~gg~~~~~~~~~~~~~~~~ 259 (264)
++++++.+||||+.++++|+++|.+-
T Consensus 449 ~~~~a~~~gGSS~~~l~~~v~~~~~~ 474 (480)
T PLN00164 449 ACRKAVEEGGSSYAALQRLAREIRHG 474 (480)
T ss_pred HHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 99999999999999999999999764
No 6
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=5.2e-47 Score=353.50 Aligned_cols=240 Identities=30% Similarity=0.487 Sum_probs=206.8
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLE 80 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~ 80 (264)
+|||+++++++++. ..++++.|||++.........++++.+|||.+++++||||||||...++.+++.+++.+|+
T Consensus 209 ~eLE~~~~~~~~~~-----~~~~v~~VGPL~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~ 283 (453)
T PLN02764 209 REIEGNFCDYIEKH-----CRKKVLLTGPVFPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGME 283 (453)
T ss_pred HHhhHHHHHHHHhh-----cCCcEEEeccCccCccccccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHH
Confidence 48999999999873 1247999999975431111235689999999999999999999999999999999999999
Q ss_pred hcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCchhHH
Q 042249 81 MSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNSVL 160 (264)
Q Consensus 81 ~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~si~ 160 (264)
..+.+|+|+++.+... . +....+|++|.++++++++++.+|+||.+||+|+++++|||||||||++
T Consensus 284 ~s~~pflwv~r~~~~~----------~----~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~ 349 (453)
T PLN02764 284 LTGSPFLVAVKPPRGS----------S----TIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMW 349 (453)
T ss_pred hCCCCeEEEEeCCCCC----------c----chhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHH
Confidence 9999999999864210 0 1123589999999999999999999999999999999999999999999
Q ss_pred HHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHhh
Q 042249 161 ESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGE--DGKLLRDKMRVLKDAAANA 238 (264)
Q Consensus 161 eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~--~~~~~r~~a~~l~~~~~~a 238 (264)
||+++|||||++|++.||+.||+++++++|+|+.+...+.+.+++++|+++|+++|.++ +++.+|+++++++++++
T Consensus 350 Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~-- 427 (453)
T PLN02764 350 ESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA-- 427 (453)
T ss_pred HHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH--
Confidence 99999999999999999999999997669999998543213489999999999999863 47889999999999997
Q ss_pred cCCCCChHHHHHHHHHHHHhhhccC
Q 042249 239 LSPDGFSTKSLANVAQKWKNLENDT 263 (264)
Q Consensus 239 ~~~gg~~~~~~~~~~~~~~~~~~~~ 263 (264)
+||||+.++++|+++|.+..+.|
T Consensus 428 --~~GSS~~~l~~lv~~~~~~~~~~ 450 (453)
T PLN02764 428 --SPGLLTGYVDNFIESLQDLVSGT 450 (453)
T ss_pred --hcCCHHHHHHHHHHHHHHhcccc
Confidence 58999999999999999998765
No 7
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.8e-47 Score=358.02 Aligned_cols=240 Identities=39% Similarity=0.688 Sum_probs=206.3
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCC----------CCCChhhHHHhhccCCCCcEEEEEecCCCCCCHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSI----------NESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQK 70 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~----------~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~ 70 (264)
+|||+++++++++.+ ..++++.|||++..... ....++++.+||+.++++++|||||||+...+.+
T Consensus 224 ~eLE~~~~~~~~~~~----~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~ 299 (477)
T PLN02863 224 TELEGIYLEHLKKEL----GHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKE 299 (477)
T ss_pred HHHHHHHHHHHHhhc----CCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHH
Confidence 479999999999842 33579999999753210 0112468999999999899999999999989999
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccce
Q 042249 71 QLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGF 150 (264)
Q Consensus 71 ~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ 150 (264)
++.+++.+|+..+.+|||+++..... ......+|++|.++.+++|+++.+|+||.+||+|+++++|
T Consensus 300 ~~~ela~gL~~~~~~flw~~~~~~~~--------------~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~f 365 (477)
T PLN02863 300 QMEALASGLEKSGVHFIWCVKEPVNE--------------ESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAF 365 (477)
T ss_pred HHHHHHHHHHhCCCcEEEEECCCccc--------------ccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeE
Confidence 99999999999999999999854220 0112358999988888899999999999999999999999
Q ss_pred eeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042249 151 LSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRV 230 (264)
Q Consensus 151 ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~ 230 (264)
||||||||++||+++|||||++|++.||+.||+++++++|+|+++.....+.++.+++.++|+++|. ++++||+||++
T Consensus 366 vtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~--~~~~~r~~a~~ 443 (477)
T PLN02863 366 LTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVS--ENQVERERAKE 443 (477)
T ss_pred EecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhh--ccHHHHHHHHH
Confidence 9999999999999999999999999999999999876589999996533345789999999999994 23699999999
Q ss_pred HHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 042249 231 LKDAAANALSPDGFSTKSLANVAQKWKNLE 260 (264)
Q Consensus 231 l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 260 (264)
+++.+++|+++||||+.++++|+++|++++
T Consensus 444 l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 444 LRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999875
No 8
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=7.5e-47 Score=352.99 Aligned_cols=236 Identities=26% Similarity=0.454 Sum_probs=204.6
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLE 80 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~ 80 (264)
+|||+++++++++. ..|++++|||++.......++++++.+||+.+++++||||||||...++.+++.+++.+++
T Consensus 203 ~eLE~~~~~~~~~~-----~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~ 277 (442)
T PLN02208 203 KEIEGKFCDYISRQ-----YHKKVLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGME 277 (442)
T ss_pred HHHHHHHHHHHHhh-----cCCCEEEEeecccCcCCCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHH
Confidence 47999999999883 2368999999986543223467899999999988999999999999999999999999998
Q ss_pred hcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCchhHH
Q 042249 81 MSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNSVL 160 (264)
Q Consensus 81 ~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~si~ 160 (264)
..+.+|+|+++..... . .....+|++|.++++++|+++.+|+||.+||+|+++++|||||||||++
T Consensus 278 ~s~~pf~wv~r~~~~~----------~----~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~ 343 (442)
T PLN02208 278 LTGLPFLIAVKPPRGS----------S----TVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIW 343 (442)
T ss_pred hCCCcEEEEEeCCCcc----------c----chhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHH
Confidence 8999999999854210 0 1123589999999999999999999999999999999999999999999
Q ss_pred HHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHhh
Q 042249 161 ESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGE--DGKLLRDKMRVLKDAAANA 238 (264)
Q Consensus 161 eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~--~~~~~r~~a~~l~~~~~~a 238 (264)
||+++|||||++|+++||+.||+++++++|+|+.+...+++.+++++|.++|+++|+++ +|+.+|++++++++++.
T Consensus 344 Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~-- 421 (442)
T PLN02208 344 ESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV-- 421 (442)
T ss_pred HHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh--
Confidence 99999999999999999999999888779999999764445689999999999999864 38889999999999985
Q ss_pred cCCCCChHHHHHHHHHHHHhh
Q 042249 239 LSPDGFSTKSLANVAQKWKNL 259 (264)
Q Consensus 239 ~~~gg~~~~~~~~~~~~~~~~ 259 (264)
.+|||+.++++|+++|+++
T Consensus 422 --~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 422 --SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred --cCCcHHHHHHHHHHHHHHh
Confidence 3789999999999999765
No 9
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=8.2e-47 Score=352.65 Aligned_cols=229 Identities=35% Similarity=0.645 Sum_probs=200.2
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCC--------CCC-----C--CChhhHHHhhccCCCCcEEEEEecCCC
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTG--------SIN-----E--SDRTDCLKWLDDQPNGSVLFVCFGSGG 65 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~--------~~~-----~--~~~~~~~~wl~~~~~~~vVyvs~GS~~ 65 (264)
+|||+++++++++ . ++++.|||++... ... + +.++++.+||+.++++++|||||||..
T Consensus 203 ~eLE~~~~~~~~~------~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~ 275 (449)
T PLN02173 203 HDLDLHENELLSK------V-CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMA 275 (449)
T ss_pred HHhhHHHHHHHHh------c-CCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccc
Confidence 4899999999976 3 3699999997421 000 0 223469999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCC
Q 042249 66 SLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHG 145 (264)
Q Consensus 66 ~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~ 145 (264)
..+.+++.+++.+| .+.+|+|+++.... ..+|++|.++..+.|+++.+|+||.+||+|+
T Consensus 276 ~~~~~~~~ela~gL--s~~~flWvvr~~~~-------------------~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~ 334 (449)
T PLN02173 276 KLSSEQMEEIASAI--SNFSYLWVVRASEE-------------------SKLPPGFLETVDKDKSLVLKWSPQLQVLSNK 334 (449)
T ss_pred cCCHHHHHHHHHHh--cCCCEEEEEeccch-------------------hcccchHHHhhcCCceEEeCCCCHHHHhCCC
Confidence 99999999999999 67789999985322 2478888888777789999999999999999
Q ss_pred CccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC-CCCCCHHHHHHHHHHHhcCCchHHH
Q 042249 146 STGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE-DGLVGREEVATYARGLIQGEDGKLL 224 (264)
Q Consensus 146 ~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~ 224 (264)
++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+...+ ++.+++++|.++|+++|.+++++.+
T Consensus 335 ~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~ 414 (449)
T PLN02173 335 AIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEM 414 (449)
T ss_pred ccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHH
Confidence 999999999999999999999999999999999999999998679999987543 2357999999999999998888999
Q ss_pred HHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 042249 225 RDKMRVLKDAAANALSPDGFSTKSLANVAQKWK 257 (264)
Q Consensus 225 r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 257 (264)
|+||+++++++++|+++||||++++++|++++.
T Consensus 415 r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 415 KENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 999999999999999999999999999999885
No 10
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.3e-46 Score=353.03 Aligned_cols=230 Identities=32% Similarity=0.585 Sum_probs=196.0
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccC-----CCC---------CCCChhhHHHhhccCCCCcEEEEEecCCCC
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILT-----GSI---------NESDRTDCLKWLDDQPNGSVLFVCFGSGGS 66 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~-----~~~---------~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~ 66 (264)
+|||+++++++++ . +++++|||++.. ... .+..+++|.+||+.++++++|||||||...
T Consensus 209 ~eLE~~~~~~l~~------~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~ 281 (456)
T PLN02210 209 YELESEIIESMAD------L-KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLE 281 (456)
T ss_pred HHHhHHHHHHHhh------c-CCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEeccccc
Confidence 4799999999987 2 479999999742 110 023456799999999889999999999988
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcC-CCCeEecccCCchhccCCC
Q 042249 67 LSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTK-GVGLVVPSWAPQIQVLSHG 145 (264)
Q Consensus 67 ~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~i~~~vpq~~lL~~~ 145 (264)
.+.+++.+++.+|+..+.+|||+++.... ...++.|.++.. +++ .+.+|+||.+||+|+
T Consensus 282 ~~~~~~~e~a~~l~~~~~~flw~~~~~~~-------------------~~~~~~~~~~~~~~~g-~v~~w~PQ~~iL~h~ 341 (456)
T PLN02210 282 SLENQVETIAKALKNRGVPFLWVIRPKEK-------------------AQNVQVLQEMVKEGQG-VVLEWSPQEKILSHM 341 (456)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCcc-------------------ccchhhHHhhccCCCe-EEEecCCHHHHhcCc
Confidence 89999999999999999999999975321 012334444442 344 467999999999999
Q ss_pred CccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC-CCCCCHHHHHHHHHHHhcCCchHHH
Q 042249 146 STGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE-DGLVGREEVATYARGLIQGEDGKLL 224 (264)
Q Consensus 146 ~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~ 224 (264)
++++|||||||||++||+++|||||++|+++||+.||+++++++|+|+.+...+ ++.+++++|+++|+++|.+++|+++
T Consensus 342 ~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~ 421 (456)
T PLN02210 342 AISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADI 421 (456)
T ss_pred CcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHH
Confidence 999999999999999999999999999999999999999997689999996432 2458999999999999988778899
Q ss_pred HHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 042249 225 RDKMRVLKDAAANALSPDGFSTKSLANVAQKWK 257 (264)
Q Consensus 225 r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 257 (264)
|+||++|++.+++|+++||||+.++++|+++|.
T Consensus 422 r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 422 RRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999986
No 11
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.5e-46 Score=353.51 Aligned_cols=238 Identities=33% Similarity=0.603 Sum_probs=202.3
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCC---C---C--CCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGS---I---N--ESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQL 72 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~---~---~--~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~ 72 (264)
+|||+++++++++ ..| ++.|||++.... . . +..++++.+||+.++++++|||||||+..++.+++
T Consensus 223 ~eLE~~~~~~l~~------~~~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~ 295 (480)
T PLN02555 223 QELEKEIIDYMSK------LCP-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQI 295 (480)
T ss_pred HHHhHHHHHHHhh------CCC-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHH
Confidence 4899999999987 345 999999975321 1 0 23456899999999888999999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceee
Q 042249 73 NELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLS 152 (264)
Q Consensus 73 ~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~It 152 (264)
.+++.+|+..+++|||+++..... .+ .....+|+++..+.++ |+++.+|+||.+||.|+++++|||
T Consensus 296 ~ela~~l~~~~~~flW~~~~~~~~---------~~----~~~~~lp~~~~~~~~~-~g~v~~W~PQ~~iL~H~~v~~Fvt 361 (480)
T PLN02555 296 DEIAYGVLNSGVSFLWVMRPPHKD---------SG----VEPHVLPEEFLEKAGD-KGKIVQWCPQEKVLAHPSVACFVT 361 (480)
T ss_pred HHHHHHHHhcCCeEEEEEecCccc---------cc----chhhcCChhhhhhcCC-ceEEEecCCHHHHhCCCccCeEEe
Confidence 999999999999999999843110 00 0112478888777654 556779999999999999999999
Q ss_pred ccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc--CCCCCCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042249 153 HCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN--EDGLVGREEVATYARGLIQGEDGKLLRDKMRV 230 (264)
Q Consensus 153 HGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~--~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~ 230 (264)
||||||++||+++|||||++|+++||+.||+++++.+|+|+.+... ..+.+++++|.++|+++|.+++|+++|+||++
T Consensus 362 H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~ 441 (480)
T PLN02555 362 HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALK 441 (480)
T ss_pred cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 9999999999999999999999999999999999967999999531 12348999999999999988788999999999
Q ss_pred HHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 042249 231 LKDAAANALSPDGFSTKSLANVAQKWKNL 259 (264)
Q Consensus 231 l~~~~~~a~~~gg~~~~~~~~~~~~~~~~ 259 (264)
|++++++|+++||||+.++++||++|.+.
T Consensus 442 l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 442 WKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999864
No 12
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=5.1e-47 Score=354.24 Aligned_cols=229 Identities=46% Similarity=0.865 Sum_probs=194.2
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCC--C-CCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSI--N-ESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELAL 77 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~--~-~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~ 77 (264)
+|||+++++++++.+ ..++++.|||++..... . ...+.++.+||+.+++++||||||||...++.+++.+++.
T Consensus 218 ~eLE~~~l~~l~~~~----~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~ 293 (451)
T PLN03004 218 DALENRAIKAITEEL----CFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAV 293 (451)
T ss_pred HHhHHHHHHHHHhcC----CCCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHH
Confidence 489999999998731 23579999999853211 1 1123569999999988999999999999999999999999
Q ss_pred HHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCC-CCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCc
Q 042249 78 GLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFD-YLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGW 156 (264)
Q Consensus 78 al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~ 156 (264)
+|+.++++|||+++..... . . +..... .+|++|.++++++|+++.+|+||.+||+|+++++|||||||
T Consensus 294 gL~~s~~~FlW~~r~~~~~---------~-~-~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~ 362 (451)
T PLN03004 294 GLEKSGQRFLWVVRNPPEL---------E-K-TELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGW 362 (451)
T ss_pred HHHHCCCCEEEEEcCCccc---------c-c-cccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcc
Confidence 9999999999999853110 0 0 000112 38999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 042249 157 NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAA 236 (264)
Q Consensus 157 ~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~ 236 (264)
||++||+++|||||++|++.||+.||+++++++|+|+++...+.+.+++++|+++|+++|.++ +||+|++++++.++
T Consensus 363 nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~ 439 (451)
T PLN03004 363 NSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAE 439 (451)
T ss_pred hHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHH
Confidence 999999999999999999999999999998658999999754334579999999999999875 89999999999999
Q ss_pred hhcCCCCChHH
Q 042249 237 NALSPDGFSTK 247 (264)
Q Consensus 237 ~a~~~gg~~~~ 247 (264)
+|+++||||+.
T Consensus 440 ~Av~~GGSS~~ 450 (451)
T PLN03004 440 LALTETGSSHT 450 (451)
T ss_pred HHhcCCCCCCC
Confidence 99999999864
No 13
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=4.1e-46 Score=351.14 Aligned_cols=242 Identities=40% Similarity=0.685 Sum_probs=205.0
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCC--------C-CCC-ChhhHHHhhccCCCCcEEEEEecCCCCCCHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGS--------I-NES-DRTDCLKWLDDQPNGSVLFVCFGSGGSLSQK 70 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~--------~-~~~-~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~ 70 (264)
+|||+++++++++.+ . ++++.|||++.... . ... .+++|.+||+.+++++||||||||......+
T Consensus 225 ~eLE~~~l~~l~~~~----~-~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~ 299 (491)
T PLN02534 225 NELEHGCAEAYEKAI----K-KKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPS 299 (491)
T ss_pred HHhhHHHHHHHHhhc----C-CcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHH
Confidence 489999999998842 2 47999999974211 0 011 2357999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccce
Q 042249 71 QLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGF 150 (264)
Q Consensus 71 ~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ 150 (264)
++.+++.+|+.++.+|||+++.+... .. .....+|++|.++..++|+++.+|+||..||+|+++++|
T Consensus 300 q~~e~a~gl~~~~~~flW~~r~~~~~---------~~----~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~f 366 (491)
T PLN02534 300 QLIELGLGLEASKKPFIWVIKTGEKH---------SE----LEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGF 366 (491)
T ss_pred HHHHHHHHHHhCCCCEEEEEecCccc---------cc----hhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceE
Confidence 99999999999999999999853210 00 001136889988888889999999999999999999999
Q ss_pred eeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc-------CC--C-CCCHHHHHHHHHHHhc--C
Q 042249 151 LSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN-------ED--G-LVGREEVATYARGLIQ--G 218 (264)
Q Consensus 151 ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~-------~~--~-~~~~~~l~~ai~~ll~--~ 218 (264)
||||||||++||+++|||||++|++.||+.||+++++++|+|+++... ++ | .+++++|.++|+++|. +
T Consensus 367 vtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~ 446 (491)
T PLN02534 367 LTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGG 446 (491)
T ss_pred EecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999889999988421 11 2 4899999999999997 4
Q ss_pred CchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 042249 219 EDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLE 260 (264)
Q Consensus 219 ~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 260 (264)
++|+++|+||++|++.+++|+.+||||+.++++|+++|.+-.
T Consensus 447 eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~ 488 (491)
T PLN02534 447 EEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQ 488 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 568899999999999999999999999999999999998643
No 14
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=8.8e-46 Score=346.15 Aligned_cols=240 Identities=29% Similarity=0.490 Sum_probs=202.5
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCC--CCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSI--NESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALG 78 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~--~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~a 78 (264)
+|||+.+++++++.+ .+.+++|||++..... ....++++.+|||.+++++||||||||....+.+++.+++.+
T Consensus 202 ~eLE~~~~~~~~~~~-----~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~g 276 (446)
T PLN00414 202 VELEGNLCDFIERQC-----QRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLG 276 (446)
T ss_pred HHHHHHHHHHHHHhc-----CCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHH
Confidence 489999999998832 2469999999753221 112345799999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCchh
Q 042249 79 LEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNS 158 (264)
Q Consensus 79 l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~s 158 (264)
|+..+.+|+|+++.+... . +....+|++|.++++++++++.+|+||.+||+|+++++|||||||||
T Consensus 277 L~~s~~~Flwvvr~~~~~----------~----~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS 342 (446)
T PLN00414 277 MELTGLPFLIAVMPPKGS----------S----TVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGS 342 (446)
T ss_pred HHHcCCCeEEEEecCCCc----------c----cchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhH
Confidence 999999999999864210 0 11235899999999999999999999999999999999999999999
Q ss_pred HHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHH
Q 042249 159 VLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGE--DGKLLRDKMRVLKDAAA 236 (264)
Q Consensus 159 i~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~--~~~~~r~~a~~l~~~~~ 236 (264)
++||+++|||||++|++.||+.||+++++++|+|+.+...+++.+++++|+++++++|.++ .++++|++++++++.+.
T Consensus 343 ~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~ 422 (446)
T PLN00414 343 MWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV 422 (446)
T ss_pred HHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997659999999654324589999999999999764 37789999999999974
Q ss_pred hhcCCCCChHHHHHHHHHHHHhhhccC
Q 042249 237 NALSPDGFSTKSLANVAQKWKNLENDT 263 (264)
Q Consensus 237 ~a~~~gg~~~~~~~~~~~~~~~~~~~~ 263 (264)
++||+| ..+++|+++++++.+.|
T Consensus 423 ---~~gg~s-s~l~~~v~~~~~~~~~~ 445 (446)
T PLN00414 423 ---SPGLLS-GYADKFVEALENEVNNT 445 (446)
T ss_pred ---cCCCcH-HHHHHHHHHHHHhcccC
Confidence 467744 33899999999887655
No 15
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.8e-46 Score=351.30 Aligned_cols=241 Identities=42% Similarity=0.812 Sum_probs=200.9
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCC---CC--CCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGS---IN--ESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNEL 75 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~---~~--~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l 75 (264)
+|||+++++++++... ..|++++|||++.... .. ...+.++.+||+.++++++|||||||+..++.+++.++
T Consensus 225 ~eLE~~~~~~l~~~~~---~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~el 301 (475)
T PLN02167 225 TELEPNAFDYFSRLPE---NYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEI 301 (475)
T ss_pred HHHHHHHHHHHHhhcc---cCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHH
Confidence 4799999999987311 2478999999986321 11 11236799999999889999999999988899999999
Q ss_pred HHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccC
Q 042249 76 ALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCG 155 (264)
Q Consensus 76 ~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG 155 (264)
+.+|+.++++|||+++..... . ......+|++|.+++++++ ++.+|+||.+||+|+++++||||||
T Consensus 302 a~~l~~~~~~flw~~~~~~~~---------~----~~~~~~lp~~~~er~~~rg-~v~~w~PQ~~iL~h~~vg~fvtH~G 367 (475)
T PLN02167 302 AQALELVGCRFLWSIRTNPAE---------Y----ASPYEPLPEGFMDRVMGRG-LVCGWAPQVEILAHKAIGGFVSHCG 367 (475)
T ss_pred HHHHHhCCCcEEEEEecCccc---------c----cchhhhCChHHHHHhccCe-eeeccCCHHHHhcCcccCeEEeeCC
Confidence 999999999999999853210 0 0112358999988887766 4569999999999999999999999
Q ss_pred chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc----CCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 042249 156 WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN----EDGLVGREEVATYARGLIQGEDGKLLRDKMRVL 231 (264)
Q Consensus 156 ~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~----~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l 231 (264)
|||++||+++|||||++|+++||+.||+++.+++|+|+.+... ..+.+++++|.++|+++|.++ +.||+|++++
T Consensus 368 ~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~ 445 (475)
T PLN02167 368 WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEI 445 (475)
T ss_pred cccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHHHHHHH
Confidence 9999999999999999999999999998754449999998642 112479999999999999764 4899999999
Q ss_pred HHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 042249 232 KDAAANALSPDGFSTKSLANVAQKWKNLE 260 (264)
Q Consensus 232 ~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 260 (264)
++.+++++++||||+.++++|+++|..-+
T Consensus 446 ~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 446 AEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999998654
No 16
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=6.4e-46 Score=351.12 Aligned_cols=240 Identities=36% Similarity=0.664 Sum_probs=203.6
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCC-------C---CCChhhHHHhhccCCCCcEEEEEecCCCCCCHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSI-------N---ESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQK 70 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~-------~---~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~ 70 (264)
++||+++++++++.. .+.+++|||+...... . ...++++.+||+.++++++|||||||+...+.+
T Consensus 227 ~~le~~~~~~~~~~~-----~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~ 301 (482)
T PLN03007 227 YELESAYADFYKSFV-----AKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNE 301 (482)
T ss_pred HHHHHHHHHHHHhcc-----CCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHH
Confidence 378999999998732 2369999998643211 1 112467999999998899999999999888899
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccce
Q 042249 71 QLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGF 150 (264)
Q Consensus 71 ~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ 150 (264)
++.+++.+|+.++++|||+++..... .+....+|++|.++..++|+++.+|+||.+||+|+++++|
T Consensus 302 ~~~~~~~~l~~~~~~flw~~~~~~~~--------------~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~f 367 (482)
T PLN03007 302 QLFEIAAGLEGSGQNFIWVVRKNENQ--------------GEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGF 367 (482)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCcc--------------cchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCcccee
Confidence 99999999999999999999864210 0112358999999998999999999999999999999999
Q ss_pred eeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc-----CCCCCCHHHHHHHHHHHhcCCchHHHH
Q 042249 151 LSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN-----EDGLVGREEVATYARGLIQGEDGKLLR 225 (264)
Q Consensus 151 ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~-----~~~~~~~~~l~~ai~~ll~~~~~~~~r 225 (264)
||||||||++||+++|||||++|+++||+.||+++++.+++|+.+... +.+.+++++|+++|+++|.++++++||
T Consensus 368 vtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r 447 (482)
T PLN03007 368 VTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERR 447 (482)
T ss_pred eecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHH
Confidence 999999999999999999999999999999999988656666665321 112489999999999999987788999
Q ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 042249 226 DKMRVLKDAAANALSPDGFSTKSLANVAQKWKNL 259 (264)
Q Consensus 226 ~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~ 259 (264)
+||+++++.+++|+.+||||+.++++|++.+.++
T Consensus 448 ~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 448 LRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999864
No 17
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.3e-45 Score=347.11 Aligned_cols=247 Identities=41% Similarity=0.707 Sum_probs=198.6
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeeccccc-CCC-CC--CCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLIL-TGS-IN--ESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELA 76 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~-~~~-~~--~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~ 76 (264)
+|||+.+++++++.. ...|++++|||++. ... .. .+.+.++.+||+++++++||||||||+..++.+++.+++
T Consensus 220 ~eLe~~~~~~l~~~~---~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la 296 (481)
T PLN02554 220 AELEPQALKFFSGSS---GDLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIA 296 (481)
T ss_pred HHHhHHHHHHHHhcc---cCCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHH
Confidence 479999999998721 13468999999943 221 11 234568999999998889999999999888999999999
Q ss_pred HHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCc
Q 042249 77 LGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGW 156 (264)
Q Consensus 77 ~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~ 156 (264)
.+|+.++++|||+++...... ...+.... .+....+|++|.++.+++ +++.+|+||.+||+|+++++|||||||
T Consensus 297 ~~l~~~~~~flW~~~~~~~~~----~~~~~~~~-~~~~~~lp~~~~~r~~~~-g~v~~W~PQ~~iL~H~~v~~FvtH~G~ 370 (481)
T PLN02554 297 IALERSGHRFLWSLRRASPNI----MKEPPGEF-TNLEEILPEGFLDRTKDI-GKVIGWAPQVAVLAKPAIGGFVTHCGW 370 (481)
T ss_pred HHHHHcCCCeEEEEcCCcccc----cccccccc-cchhhhCChHHHHHhccC-ceEEeeCCHHHHhCCcccCcccccCcc
Confidence 999999999999998632100 00000000 011123688888887654 456799999999999999999999999
Q ss_pred hhHHHHHHhCcceeecCCCchHHHHHHH-HHhhcCceeEeecc--------CCCCCCHHHHHHHHHHHhcCCchHHHHHH
Q 042249 157 NSVLESIVHGVPIIAWPLYAEQKMNAVL-LTDDLKVAWRVKVN--------EDGLVGREEVATYARGLIQGEDGKLLRDK 227 (264)
Q Consensus 157 ~si~eal~~GvP~l~~P~~~DQ~~na~~-v~~~~G~G~~l~~~--------~~~~~~~~~l~~ai~~ll~~~~~~~~r~~ 227 (264)
||++||+++|||||++|+++||+.||++ +++ +|+|+.+... ..+.+++++|.++|+++|.++ ++||+|
T Consensus 371 nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~-~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~--~~~r~~ 447 (481)
T PLN02554 371 NSILESLWFGVPMAAWPLYAEQKFNAFEMVEE-LGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD--SDVRKR 447 (481)
T ss_pred chHHHHHHcCCCEEecCccccchhhHHHHHHH-hCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC--HHHHHH
Confidence 9999999999999999999999999965 556 9999998631 112489999999999999732 489999
Q ss_pred HHHHHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 042249 228 MRVLKDAAANALSPDGFSTKSLANVAQKWKNL 259 (264)
Q Consensus 228 a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~ 259 (264)
|+++++.+++|+++||||+.++++|+++|++.
T Consensus 448 a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 448 VKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999875
No 18
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=2.6e-45 Score=343.04 Aligned_cols=240 Identities=32% Similarity=0.507 Sum_probs=196.3
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCC----CC--C----CCChhhHHHhhccCCCCcEEEEEecCCCCCCHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTG----SI--N----ESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQK 70 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~----~~--~----~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~ 70 (264)
+|||+++++++++ . .++.|||++... .. . ++.+.++.+||+.+++++||||||||...++.+
T Consensus 206 ~eLE~~~~~~l~~------~--~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~ 277 (455)
T PLN02152 206 DSLEPEFLTAIPN------I--EMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKK 277 (455)
T ss_pred HHhhHHHHHhhhc------C--CEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHH
Confidence 4899999999965 2 599999997531 11 0 122457999999998899999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccce
Q 042249 71 QLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGF 150 (264)
Q Consensus 71 ~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ 150 (264)
++.+++.+|+.++.+|||+++.+..... . ..+.. .....+|++|.++.++. .++.+|+||.+||+|+++++|
T Consensus 278 q~~ela~gL~~s~~~flWv~r~~~~~~~-~--~~~~~----~~~~~~~~~f~e~~~~~-g~v~~W~PQ~~iL~h~~vg~f 349 (455)
T PLN02152 278 QIEELARALIEGKRPFLWVITDKLNREA-K--IEGEE----ETEIEKIAGFRHELEEV-GMIVSWCSQIEVLRHRAVGCF 349 (455)
T ss_pred HHHHHHHHHHHcCCCeEEEEecCccccc-c--ccccc----ccccccchhHHHhccCC-eEEEeeCCHHHHhCCcccceE
Confidence 9999999999999999999986321000 0 00000 00012467787776654 466799999999999999999
Q ss_pred eeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042249 151 LSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRV 230 (264)
Q Consensus 151 ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~ 230 (264)
||||||||++||+++|||||++|++.||+.||+++++++|+|+.+....++.+++++|+++|+++|++ ++..||+|+++
T Consensus 350 vtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~-~~~~~r~~a~~ 428 (455)
T PLN02152 350 VTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEE-KSVELRESAEK 428 (455)
T ss_pred EeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhh-hHHHHHHHHHH
Confidence 99999999999999999999999999999999999986788888864433457999999999999974 46689999999
Q ss_pred HHHHHHhhcCCCCChHHHHHHHHHHHH
Q 042249 231 LKDAAANALSPDGFSTKSLANVAQKWK 257 (264)
Q Consensus 231 l~~~~~~a~~~gg~~~~~~~~~~~~~~ 257 (264)
|++.+++++.+||||+.++++|+++|.
T Consensus 429 ~~~~~~~a~~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 429 WKRLAIEAGGEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHhC
Confidence 999999999999999999999999873
No 19
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.2e-45 Score=341.68 Aligned_cols=239 Identities=33% Similarity=0.605 Sum_probs=203.2
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccC--C-CCCC----CChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILT--G-SINE----SDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLN 73 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~--~-~~~~----~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~ 73 (264)
+|||+++++++++.+ . +.++.|||+... . ..+. ..++++.+||+.+++++||||||||...++.+++.
T Consensus 223 ~eLE~~~l~~l~~~~----~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ 297 (472)
T PLN02670 223 PEFEPEWFDLLSDLY----R-KPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVT 297 (472)
T ss_pred HHHhHHHHHHHHHhh----C-CCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHH
Confidence 489999999998842 2 479999999753 1 1110 11257999999998899999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeec
Q 042249 74 ELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSH 153 (264)
Q Consensus 74 ~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItH 153 (264)
+++.+|+.++++|||+++..... .. +....+|++|.++++++++++.+|+||.+||+|+++++||||
T Consensus 298 ela~gl~~s~~~FlWv~r~~~~~--------~~-----~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtH 364 (472)
T PLN02670 298 ELALGLEKSETPFFWVLRNEPGT--------TQ-----NALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTH 364 (472)
T ss_pred HHHHHHHHCCCCEEEEEcCCccc--------cc-----chhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeec
Confidence 99999999999999999863210 00 112358999999999999999999999999999999999999
Q ss_pred cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC-CCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 042249 154 CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE-DGLVGREEVATYARGLIQGEDGKLLRDKMRVLK 232 (264)
Q Consensus 154 GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~ 232 (264)
|||||++||+++|||||++|+++||+.||+++++ +|+|+.+...+ ++.+++++|+++|+++|.+++|++||+||++++
T Consensus 365 cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~ 443 (472)
T PLN02670 365 CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMR 443 (472)
T ss_pred CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 99999997532 345899999999999998877889999999999
Q ss_pred HHHHhhcCCCCChHHHHHHHHHHHHhhhcc
Q 042249 233 DAAANALSPDGFSTKSLANVAQKWKNLEND 262 (264)
Q Consensus 233 ~~~~~a~~~gg~~~~~~~~~~~~~~~~~~~ 262 (264)
+.+++ .+.....++.|++.+.+..++
T Consensus 444 ~~~~~----~~~~~~~~~~~~~~l~~~~~~ 469 (472)
T PLN02670 444 NLFGD----MDRNNRYVDELVHYLRENRSS 469 (472)
T ss_pred HHHhC----cchhHHHHHHHHHHHHHhccc
Confidence 99995 466778888999988887643
No 20
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.1e-44 Score=339.55 Aligned_cols=227 Identities=29% Similarity=0.526 Sum_probs=192.9
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCC----C--CCChhhHHHhhccCCCCcEEEEEecCCC-CCCHHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSI----N--ESDRTDCLKWLDDQPNGSVLFVCFGSGG-SLSQKQLN 73 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~----~--~~~~~~~~~wl~~~~~~~vVyvs~GS~~-~~~~~~~~ 73 (264)
+|||+++++++++.+... ..|++++|||++..... . ++.+.++.+||+.++++++|||||||+. .++.+++.
T Consensus 215 ~eLE~~~~~~~~~~~~~~-~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~ 293 (448)
T PLN02562 215 KDEEYDDVKNHQASYNNG-QNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVR 293 (448)
T ss_pred hhhCHHHHHHHHhhhccc-cCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHH
Confidence 589999999988632111 24689999999864321 1 1334678899999988899999999985 67889999
Q ss_pred HHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeec
Q 042249 74 ELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSH 153 (264)
Q Consensus 74 ~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItH 153 (264)
+++.+|+.++++|||+++.... ..+|++|.++..+ |+++.+|+||.+||+|+++++||||
T Consensus 294 ~l~~~l~~~g~~fiW~~~~~~~-------------------~~l~~~~~~~~~~-~~~v~~w~PQ~~iL~h~~v~~fvtH 353 (448)
T PLN02562 294 TLALALEASGRPFIWVLNPVWR-------------------EGLPPGYVERVSK-QGKVVSWAPQLEVLKHQAVGCYLTH 353 (448)
T ss_pred HHHHHHHHCCCCEEEEEcCCch-------------------hhCCHHHHHHhcc-CEEEEecCCHHHHhCCCccceEEec
Confidence 9999999999999999975321 2477777776653 6677899999999999999999999
Q ss_pred cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 042249 154 CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKD 233 (264)
Q Consensus 154 GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~ 233 (264)
|||||++||+++|||||++|+++||+.||+++++.+|+|+.+. + +++++|.++|+++|.++ +||+||+++++
T Consensus 354 ~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~---~~~~~l~~~v~~~l~~~---~~r~~a~~l~~ 425 (448)
T PLN02562 354 CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--G---FGQKEVEEGLRKVMEDS---GMGERLMKLRE 425 (448)
T ss_pred CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--C---CCHHHHHHHHHHHhCCH---HHHHHHHHHHH
Confidence 9999999999999999999999999999999987579998884 3 79999999999999875 89999999999
Q ss_pred HHHhhcCCCCChHHHHHHHHHHHH
Q 042249 234 AAANALSPDGFSTKSLANVAQKWK 257 (264)
Q Consensus 234 ~~~~a~~~gg~~~~~~~~~~~~~~ 257 (264)
+++++ .+||||++++++|+++|+
T Consensus 426 ~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 426 RAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHhc-CCCCCHHHHHHHHHHHhC
Confidence 99887 678999999999999874
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.2e-43 Score=333.85 Aligned_cols=228 Identities=39% Similarity=0.708 Sum_probs=191.7
Q ss_pred CCCcHHHHHHHHhhhhccCCCCCeEeecccccCCCC-----C---CCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHH
Q 042249 1 MDLEPGAFKALMKSRESSFRLPPVYPVGPLILTGSI-----N---ESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQL 72 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~-----~---~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~ 72 (264)
+|||+.+++++++.+ . +++++|||+...... . .+.+.++.+|++.++++++|||||||....+.+++
T Consensus 218 ~eLE~~~~~~l~~~~----~-~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~ 292 (459)
T PLN02448 218 YELEAQAIDALKSKF----P-FPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQM 292 (459)
T ss_pred HHhhHHHHHHHHhhc----C-CceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHH
Confidence 379999999998842 2 379999999753110 0 11234799999999889999999999988888999
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceee
Q 042249 73 NELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLS 152 (264)
Q Consensus 73 ~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~It 152 (264)
.+++.+|+..+++|||+++.... ++..+.+ .|.++.+|+||.+||+|+++++|||
T Consensus 293 ~~~~~~l~~~~~~~lw~~~~~~~------------------------~~~~~~~-~~~~v~~w~pQ~~iL~h~~v~~fvt 347 (459)
T PLN02448 293 DEIAAGLRDSGVRFLWVARGEAS------------------------RLKEICG-DMGLVVPWCDQLKVLCHSSVGGFWT 347 (459)
T ss_pred HHHHHHHHhCCCCEEEEEcCchh------------------------hHhHhcc-CCEEEeccCCHHHHhccCccceEEe
Confidence 99999999999999998864311 1111111 2667789999999999999999999
Q ss_pred ccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc--CCCCCCHHHHHHHHHHHhcCC--chHHHHHHH
Q 042249 153 HCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN--EDGLVGREEVATYARGLIQGE--DGKLLRDKM 228 (264)
Q Consensus 153 HGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~--~~~~~~~~~l~~ai~~ll~~~--~~~~~r~~a 228 (264)
||||||++||+++|||||++|++.||+.||+++++++|+|+.+... +.+.+++++|+++|+++|.++ ++++||+||
T Consensus 348 HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a 427 (459)
T PLN02448 348 HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRA 427 (459)
T ss_pred cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 9999999999999999999999999999999999867999988632 123479999999999999863 588999999
Q ss_pred HHHHHHHHhhcCCCCChHHHHHHHHHHHHh
Q 042249 229 RVLKDAAANALSPDGFSTKSLANVAQKWKN 258 (264)
Q Consensus 229 ~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 258 (264)
++|++++++++.+||||+.++++|+++|.+
T Consensus 428 ~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 428 KELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 999999999999999999999999999874
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.9e-38 Score=301.40 Aligned_cols=188 Identities=27% Similarity=0.457 Sum_probs=150.1
Q ss_pred HHHHHHhhhhccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCC-CCHHHHHHHHHHHHhcCCe
Q 042249 7 AFKALMKSRESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGS-LSQKQLNELALGLEMSGQR 85 (264)
Q Consensus 7 ~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~-~~~~~~~~l~~al~~~~~~ 85 (264)
.+++.|. ..|++++||+++...+ .+++.++..|++...++++|||||||... ++.+.+..++.++++.+++
T Consensus 237 ~ld~prp------~~p~v~~vGgl~~~~~--~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~ 308 (500)
T PF00201_consen 237 SLDFPRP------LLPNVVEVGGLHIKPA--KPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQR 308 (500)
T ss_dssp E----HH------HHCTSTTGCGC-S------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTE
T ss_pred cCcCCcc------hhhcccccCccccccc--cccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCc
Confidence 4677777 4579999999987654 35889999999986678899999999865 4445588899999999999
Q ss_pred EEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCchhHHHHHHh
Q 042249 86 FLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVH 165 (264)
Q Consensus 86 viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~ 165 (264)
|||++++... ..+| +|+++.+|+||.+||.|+++++||||||+||++||+++
T Consensus 309 ~iW~~~~~~~-------------------~~l~---------~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~ 360 (500)
T PF00201_consen 309 FIWKYEGEPP-------------------ENLP---------KNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYH 360 (500)
T ss_dssp EEEEETCSHG-------------------CHHH---------TTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHC
T ss_pred cccccccccc-------------------cccc---------ceEEEeccccchhhhhcccceeeeeccccchhhhhhhc
Confidence 9999976321 1233 38899999999999999999999999999999999999
Q ss_pred CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHh
Q 042249 166 GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAAN 237 (264)
Q Consensus 166 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~ 237 (264)
|||||++|+++||+.||+++++ .|+|+.++..+ ++.++|.++|+++|+|+ +|++||+++++.++.
T Consensus 361 gvP~l~~P~~~DQ~~na~~~~~-~G~g~~l~~~~---~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~ 425 (500)
T PF00201_consen 361 GVPMLGIPLFGDQPRNAARVEE-KGVGVVLDKND---LTEEELRAAIREVLENP---SYKENAKRLSSLFRD 425 (500)
T ss_dssp T--EEE-GCSTTHHHHHHHHHH-TTSEEEEGGGC----SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT-
T ss_pred cCCccCCCCcccCCccceEEEE-EeeEEEEEecC---CcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhc
Confidence 9999999999999999999999 99999999887 99999999999999986 999999999999985
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=7.2e-37 Score=290.58 Aligned_cols=209 Identities=19% Similarity=0.248 Sum_probs=173.6
Q ss_pred HHHHHHHhhhhccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCC---CCHHHHHHHHHHHHhc
Q 042249 6 GAFKALMKSRESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGS---LSQKQLNELALGLEMS 82 (264)
Q Consensus 6 ~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~---~~~~~~~~l~~al~~~ 82 (264)
+++|+.|. ..|++++|||++.+.....++++++.+|++..+ +++|||||||... .+.+.+..+++++++.
T Consensus 255 ~~~d~~rp------~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l 327 (507)
T PHA03392 255 PVFDNNRP------VPPSVQYLGGLHLHKKPPQPLDDYLEEFLNNST-NGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL 327 (507)
T ss_pred ccccCCCC------CCCCeeeecccccCCCCCCCCCHHHHHHHhcCC-CcEEEEECCCCCcCCCCCHHHHHHHHHHHHhC
Confidence 45667666 678999999998754333467899999999864 5799999999853 5678899999999999
Q ss_pred CCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCchhHHHH
Q 042249 83 GQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLES 162 (264)
Q Consensus 83 ~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~si~ea 162 (264)
+.+|||.++.... . ..+|+ |+++.+|+||.+||+|+.+++||||||+||++||
T Consensus 328 ~~~viw~~~~~~~----------------~--~~~p~---------Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Ea 380 (507)
T PHA03392 328 PYNVLWKYDGEVE----------------A--INLPA---------NVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEA 380 (507)
T ss_pred CCeEEEEECCCcC----------------c--ccCCC---------ceEEecCCCHHHHhcCCCCCEEEecCCcccHHHH
Confidence 9999999875321 0 12443 8999999999999999999999999999999999
Q ss_pred HHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCC
Q 042249 163 IVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPD 242 (264)
Q Consensus 163 l~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~g 242 (264)
+++|||||++|+++||+.||+++++ +|+|+.++..+ ++.++|.++|+++++|+ +||+||+++++.+++. .
T Consensus 381 l~~GvP~v~iP~~~DQ~~Na~rv~~-~G~G~~l~~~~---~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~---p 450 (507)
T PHA03392 381 IDALVPMVGLPMMGDQFYNTNKYVE-LGIGRALDTVT---VSAAQLVLAIVDVIENP---KYRKNLKELRHLIRHQ---P 450 (507)
T ss_pred HHcCCCEEECCCCccHHHHHHHHHH-cCcEEEeccCC---cCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhC---C
Confidence 9999999999999999999999999 99999999877 89999999999999986 9999999999999963 2
Q ss_pred CChHHHHHHHHHHHHh
Q 042249 243 GFSTKSLANVAQKWKN 258 (264)
Q Consensus 243 g~~~~~~~~~~~~~~~ 258 (264)
-+....+..-++.+-+
T Consensus 451 ~~~~~~av~~iE~v~r 466 (507)
T PHA03392 451 MTPLHKAIWYTEHVIR 466 (507)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 2233333344444443
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=8.8e-32 Score=255.21 Aligned_cols=188 Identities=36% Similarity=0.619 Sum_probs=153.4
Q ss_pred CCCeEeecccccCCCCCCCChhhHHHhhccCCCC--cEEEEEecCCC---CCCHHHHHHHHHHHHhc-CCeEEEEEeCCC
Q 042249 21 LPPVYPVGPLILTGSINESDRTDCLKWLDDQPNG--SVLFVCFGSGG---SLSQKQLNELALGLEMS-GQRFLWVVKCPD 94 (264)
Q Consensus 21 ~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~--~vVyvs~GS~~---~~~~~~~~~l~~al~~~-~~~viw~~~~~~ 94 (264)
.|++++|||++......+. ..+.+|++..+.. ++|||||||+. .++.++..+++.++++. ++.|+|+++...
T Consensus 244 ~~~v~~IG~l~~~~~~~~~--~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~ 321 (496)
T KOG1192|consen 244 LPKVIPIGPLHVKDSKQKS--PLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDD 321 (496)
T ss_pred CCCceEECcEEecCccccc--cccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCc
Confidence 6799999999988443222 1345566655444 89999999998 79999999999999999 888999998753
Q ss_pred cccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhc-cCCCCccceeeccCchhHHHHHHhCcceeecC
Q 042249 95 EKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQV-LSHGSTGGFLSHCGWNSVLESIVHGVPIIAWP 173 (264)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~l-L~~~~~~~~ItHGG~~si~eal~~GvP~l~~P 173 (264)
. ..+++++..+ ...||...+|+||.++ |.|+++++|||||||||++|++++|||||++|
T Consensus 322 ~-------------------~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~P 381 (496)
T KOG1192|consen 322 S-------------------IYFPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVP 381 (496)
T ss_pred c-------------------hhhhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCC
Confidence 2 0123333322 2347888899999998 59999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHh
Q 042249 174 LYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAAN 237 (264)
Q Consensus 174 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~ 237 (264)
+++||+.||+++++ .|.+..+...+ .+..++..++.+++.++ +|+++++++++..+.
T Consensus 382 lf~DQ~~Na~~i~~-~g~~~v~~~~~---~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 382 LFGDQPLNARLLVR-HGGGGVLDKRD---LVSEELLEAIKEILENE---EYKEAAKRLSEILRD 438 (496)
T ss_pred ccccchhHHHHHHh-CCCEEEEehhh---cCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHHc
Confidence 99999999999999 77777766665 56666999999999887 999999999998874
No 25
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.96 E-value=2e-28 Score=227.12 Aligned_cols=185 Identities=18% Similarity=0.348 Sum_probs=154.7
Q ss_pred EeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccc
Q 042249 25 YPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFG 104 (264)
Q Consensus 25 ~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~ 104 (264)
.++||+..... .+...| ...++++||+|+||.... .+.+..+++++..++.+||..++. ..
T Consensus 216 ~~~~~~~~~~~------~~~~~~--~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~~--------- 276 (406)
T COG1819 216 PYIGPLLGEAA------NELPYW--IPADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-AR--------- 276 (406)
T ss_pred Ccccccccccc------ccCcch--hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-cc---------
Confidence 46666655432 233344 334678999999999876 888999999999999999998866 32
Q ss_pred cCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHH
Q 042249 105 VHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVL 184 (264)
Q Consensus 105 ~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~ 184 (264)
.....+|. |+.+..|+||..+|++++ +||||||+||++|||++|||+|++|...||+.||.+
T Consensus 277 -------~~~~~~p~---------n~~v~~~~p~~~~l~~ad--~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~r 338 (406)
T COG1819 277 -------DTLVNVPD---------NVIVADYVPQLELLPRAD--AVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAER 338 (406)
T ss_pred -------cccccCCC---------ceEEecCCCHHHHhhhcC--EEEecCCcchHHHHHHcCCCEEEecCCcchhHHHHH
Confidence 12234565 788999999999999999 999999999999999999999999999999999999
Q ss_pred HHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHh
Q 042249 185 LTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKN 258 (264)
Q Consensus 185 v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 258 (264)
+++ +|+|+.+.... ++.+.++++|+++|.++ .|+++++++++.+++. +| ...+.++++++.+
T Consensus 339 ve~-~G~G~~l~~~~---l~~~~l~~av~~vL~~~---~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~ 400 (406)
T COG1819 339 VEE-LGAGIALPFEE---LTEERLRAAVNEVLADD---SYRRAAERLAEEFKEE---DG--PAKAADLLEEFAR 400 (406)
T ss_pred HHH-cCCceecCccc---CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHh
Confidence 999 99999999887 99999999999999986 9999999999999974 34 5566677766443
No 26
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.96 E-value=1.1e-27 Score=221.06 Aligned_cols=177 Identities=20% Similarity=0.301 Sum_probs=148.7
Q ss_pred CCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccc
Q 042249 21 LPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNA 100 (264)
Q Consensus 21 ~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~ 100 (264)
.++++++||++..... ...|....+++++||||+||+.......+..++.++.+.+.+++|.++.....
T Consensus 199 ~~~~~~~Gp~~~~~~~-------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~---- 267 (392)
T TIGR01426 199 DDSFTFVGPCIGDRKE-------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP---- 267 (392)
T ss_pred CCCeEEECCCCCCccc-------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh----
Confidence 3479999998865321 12377766778999999999866666688889999999999999988653210
Q ss_pred cccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHH
Q 042249 101 TYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKM 180 (264)
Q Consensus 101 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~ 180 (264)
..+..+| .|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|...||+.
T Consensus 268 -----------~~~~~~~---------~~v~~~~~~p~~~ll~~~~--~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~ 325 (392)
T TIGR01426 268 -----------ADLGELP---------PNVEVRQWVPQLEILKKAD--AFITHGGMNSTMEALFNGVPMVAVPQGADQPM 325 (392)
T ss_pred -----------hHhccCC---------CCeEEeCCCCHHHHHhhCC--EEEECCCchHHHHHHHhCCCEEecCCcccHHH
Confidence 0111222 3788999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHh
Q 042249 181 NAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAAN 237 (264)
Q Consensus 181 na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~ 237 (264)
|++++++ +|+|+.+...+ ++.++|.++|+++|.++ +|+++++++++.+++
T Consensus 326 ~a~~l~~-~g~g~~l~~~~---~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 326 TARRIAE-LGLGRHLPPEE---VTAEKLREAVLAVLSDP---RYAERLRKMRAEIRE 375 (392)
T ss_pred HHHHHHH-CCCEEEecccc---CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHH
Confidence 9999999 99999998766 89999999999999986 899999999999985
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.95 E-value=1.6e-26 Score=213.54 Aligned_cols=161 Identities=18% Similarity=0.224 Sum_probs=135.3
Q ss_pred CChhhHHHhhccCCCCcEEEEEecCCCCCC-HHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCC
Q 042249 39 SDRTDCLKWLDDQPNGSVLFVCFGSGGSLS-QKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYL 117 (264)
Q Consensus 39 ~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~-~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 117 (264)
..+.++..|++. .+++|||++||+.... ...+..++.+++..+.+++|+++.... .. ..+
T Consensus 226 ~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~----------------~~-~~~ 286 (401)
T cd03784 226 PPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGL----------------GA-EDL 286 (401)
T ss_pred CCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccc----------------cc-cCC
Confidence 346678888875 4679999999997644 456777889999889999999876432 00 112
Q ss_pred ChhhhhhcCCCCeEecccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeec
Q 042249 118 PKGFLDRTKGVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKV 197 (264)
Q Consensus 118 p~~~~~~~~~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~ 197 (264)
| +|+++.+|+||.++|++++ +||||||+||++||+++|||+|++|+..||+.||+++++ +|+|+.+..
T Consensus 287 ~---------~~v~~~~~~p~~~ll~~~d--~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~-~G~g~~l~~ 354 (401)
T cd03784 287 P---------DNVRVVDFVPHDWLLPRCA--AVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDP 354 (401)
T ss_pred C---------CceEEeCCCCHHHHhhhhh--eeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH-CCCCCCCCc
Confidence 2 4899999999999999999 999999999999999999999999999999999999999 999999987
Q ss_pred cCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHh
Q 042249 198 NEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAAN 237 (264)
Q Consensus 198 ~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~ 237 (264)
.+ ++.++|.++|++++.+ .++++++++++.+++
T Consensus 355 ~~---~~~~~l~~al~~~l~~----~~~~~~~~~~~~~~~ 387 (401)
T cd03784 355 RE---LTAERLAAALRRLLDP----PSRRRAAALLRRIRE 387 (401)
T ss_pred cc---CCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHh
Confidence 76 8999999999999985 566777777777753
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.68 E-value=7.9e-16 Score=140.64 Aligned_cols=174 Identities=15% Similarity=0.154 Sum_probs=122.6
Q ss_pred CCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHH-HHHHHHHHHHhcCCeEEEEEeCCCcccccc
Q 042249 22 PPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQK-QLNELALGLEMSGQRFLWVVKCPDEKATNA 100 (264)
Q Consensus 22 p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~-~~~~l~~al~~~~~~viw~~~~~~~~~~~~ 100 (264)
.+++++|+-....-.. .......+.+.-.+++++|+|..||++....+ .+.+++..+.. +.+++|+++....+
T Consensus 154 ~k~~~tG~Pvr~~~~~-~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~~~---- 227 (352)
T PRK12446 154 EKVIYTGSPVREEVLK-GNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGNLD---- 227 (352)
T ss_pred CCeEEECCcCCccccc-ccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCchHH----
Confidence 4788999887653211 11122222333335678999999999865543 34444444432 47899998864320
Q ss_pred cccccCCCCCCCCCCCCChhhhhhcCCCCeEecccC-C-chhccCCCCccceeeccCchhHHHHHHhCcceeecCCC---
Q 042249 101 TYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWA-P-QIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLY--- 175 (264)
Q Consensus 101 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~v-p-q~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~--- 175 (264)
+... . ..++.+..|+ + ...++.+++ ++|||||.+|+.|++++|+|+|++|+.
T Consensus 228 ------------------~~~~-~--~~~~~~~~f~~~~m~~~~~~ad--lvIsr~G~~t~~E~~~~g~P~I~iP~~~~~ 284 (352)
T PRK12446 228 ------------------DSLQ-N--KEGYRQFEYVHGELPDILAITD--FVISRAGSNAIFEFLTLQKPMLLIPLSKFA 284 (352)
T ss_pred ------------------HHHh-h--cCCcEEecchhhhHHHHHHhCC--EEEECCChhHHHHHHHcCCCEEEEcCCCCC
Confidence 0000 0 0144555776 4 467899999 999999999999999999999999984
Q ss_pred --chHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042249 176 --AEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRV 230 (264)
Q Consensus 176 --~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~ 230 (264)
.||..||+.+++ .|+|..+...+ ++++.|.+++.+++.|+ +.|++++++
T Consensus 285 ~~~~Q~~Na~~l~~-~g~~~~l~~~~---~~~~~l~~~l~~ll~~~--~~~~~~~~~ 335 (352)
T PRK12446 285 SRGDQILNAESFER-QGYASVLYEED---VTVNSLIKHVEELSHNN--EKYKTALKK 335 (352)
T ss_pred CCchHHHHHHHHHH-CCCEEEcchhc---CCHHHHHHHHHHHHcCH--HHHHHHHHH
Confidence 489999999999 99999998776 89999999999999875 345554444
No 29
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.58 E-value=1.6e-16 Score=130.02 Aligned_cols=135 Identities=19% Similarity=0.205 Sum_probs=96.7
Q ss_pred EEEEEecCCCCCCH-HHHHHHHHHHHh--cCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcC--CCCe
Q 042249 56 VLFVCFGSGGSLSQ-KQLNELALGLEM--SGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTK--GVGL 130 (264)
Q Consensus 56 vVyvs~GS~~~~~~-~~~~~l~~al~~--~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv 130 (264)
+|+|++||.+...- +.+..+...+.. ....|+|+++..... ....... ..++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~-----------------------~~~~~~~~~~~~v 57 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYE-----------------------ELKIKVENFNPNV 57 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECH-----------------------HHCCCHCCTTCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHH-----------------------HHHHHHhccCCcE
Confidence 58999998864211 122223333332 246788888765220 0011111 1478
Q ss_pred EecccCC-chhccCCCCccceeeccCchhHHHHHHhCcceeecCCCc----hHHHHHHHHHhhcCceeEeeccCCCCCCH
Q 042249 131 VVPSWAP-QIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYA----EQKMNAVLLTDDLKVAWRVKVNEDGLVGR 205 (264)
Q Consensus 131 ~i~~~vp-q~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~----DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 205 (264)
.+.+|.+ ...++..++ ++|||||.+|++|++++|+|+|++|... +|..||..+++ .|+|+.+.... .+.
T Consensus 58 ~~~~~~~~m~~~m~~aD--lvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~~~---~~~ 131 (167)
T PF04101_consen 58 KVFGFVDNMAELMAAAD--LVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDESE---LNP 131 (167)
T ss_dssp EEECSSSSHHHHHHHHS--EEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSECCC----SC
T ss_pred EEEechhhHHHHHHHcC--EEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCccc---CCH
Confidence 8999999 688999999 9999999999999999999999999988 99999999999 99999998776 779
Q ss_pred HHHHHHHHHHhcCC
Q 042249 206 EEVATYARGLIQGE 219 (264)
Q Consensus 206 ~~l~~ai~~ll~~~ 219 (264)
+.|.++|.+++.++
T Consensus 132 ~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 132 EELAEAIEELLSDP 145 (167)
T ss_dssp CCHHHHHHCHCCCH
T ss_pred HHHHHHHHHHHcCc
Confidence 99999999999875
No 30
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.55 E-value=1.7e-13 Score=125.07 Aligned_cols=137 Identities=20% Similarity=0.229 Sum_probs=107.6
Q ss_pred CCcEEEEEecCCCCCCH-HHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCC-e
Q 042249 53 NGSVLFVCFGSGGSLSQ-KQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVG-L 130 (264)
Q Consensus 53 ~~~vVyvs~GS~~~~~~-~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n-v 130 (264)
++++|+|..||++.... +.+..+...+.+ +..+++.++.... +.....+...| +
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~-----------------------~~~~~~~~~~~~~ 237 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDL-----------------------EELKSAYNELGVV 237 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchH-----------------------HHHHHHHhhcCcE
Confidence 67899999999986443 334445545544 5788888876432 12222333334 7
Q ss_pred EecccCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeecCC----CchHHHHHHHHHhhcCceeEeeccCCCCCCH
Q 042249 131 VVPSWAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPL----YAEQKMNAVLLTDDLKVAWRVKVNEDGLVGR 205 (264)
Q Consensus 131 ~i~~~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 205 (264)
.+..|... ..++..++ ++||++|++|+.|+++.|+|+|.+|+ ..||..||..+++ .|+|..+...+ +|.
T Consensus 238 ~v~~f~~dm~~~~~~AD--LvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~gaa~~i~~~~---lt~ 311 (357)
T COG0707 238 RVLPFIDDMAALLAAAD--LVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-AGAALVIRQSE---LTP 311 (357)
T ss_pred EEeeHHhhHHHHHHhcc--EEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-CCCEEEecccc---CCH
Confidence 77888876 56788888 99999999999999999999999997 2489999999999 99999999988 999
Q ss_pred HHHHHHHHHHhcCC
Q 042249 206 EEVATYARGLIQGE 219 (264)
Q Consensus 206 ~~l~~ai~~ll~~~ 219 (264)
+.+.+.|.+++.++
T Consensus 312 ~~l~~~i~~l~~~~ 325 (357)
T COG0707 312 EKLAELILRLLSNP 325 (357)
T ss_pred HHHHHHHHHHhcCH
Confidence 99999999999874
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.53 E-value=8.8e-14 Score=124.60 Aligned_cols=122 Identities=20% Similarity=0.330 Sum_probs=97.3
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHHHhcC-CeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeE
Q 042249 53 NGSVLFVCFGSGGSLSQKQLNELALGLEMSG-QRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLV 131 (264)
Q Consensus 53 ~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~-~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~ 131 (264)
+++.|+|++|..... .++++++..+ ..|++. +.... .. ...|+.
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~-------------------~~---------~~~ni~ 235 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA-------------------DP---------RPGNIH 235 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc-------------------cc---------cCCCEE
Confidence 456899999987532 5566666666 565555 43321 00 134888
Q ss_pred ecccC--CchhccCCCCccceeeccCchhHHHHHHhCcceeecCC--CchHHHHHHHHHhhcCceeEeeccCCCCCCHHH
Q 042249 132 VPSWA--PQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPL--YAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREE 207 (264)
Q Consensus 132 i~~~v--pq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~--~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~ 207 (264)
+..|. ...++|..++ ++|||||.+|++|++++|+|+|++|. ..+|..||+.+++ .|+|+.+...+ ++++.
T Consensus 236 ~~~~~~~~~~~~m~~ad--~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~~~~---~~~~~ 309 (318)
T PF13528_consen 236 VRPFSTPDFAELMAAAD--LVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLSQED---LTPER 309 (318)
T ss_pred EeecChHHHHHHHHhCC--EEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEccccc---CCHHH
Confidence 88876 4477899999 99999999999999999999999999 7899999999999 99999998776 99999
Q ss_pred HHHHHHHH
Q 042249 208 VATYARGL 215 (264)
Q Consensus 208 l~~ai~~l 215 (264)
|++.|+++
T Consensus 310 l~~~l~~~ 317 (318)
T PF13528_consen 310 LAEFLERL 317 (318)
T ss_pred HHHHHhcC
Confidence 99999864
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.43 E-value=1e-12 Score=118.54 Aligned_cols=82 Identities=20% Similarity=0.278 Sum_probs=70.1
Q ss_pred CeEecccCC--chhccCCCCccceeeccCchhHHHHHHhCcceeecCCCc--hHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 129 GLVVPSWAP--QIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYA--EQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 129 nv~i~~~vp--q~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
|+.+.+|.| ....|..++ ++|||||++|++||+++|+|+|++|... ||..||+.+++ .|+|+.+...+ +
T Consensus 230 ~v~~~~~~~~~~~~~l~~ad--~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~~~---~- 302 (321)
T TIGR00661 230 NVEIRRITTDNFKELIKNAE--LVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEYKE---L- 302 (321)
T ss_pred CEEEEECChHHHHHHHHhCC--EEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcChhh---H-
Confidence 788889987 467788888 9999999999999999999999999854 89999999999 99999998765 3
Q ss_pred HHHHHHHHHHHhcCC
Q 042249 205 REEVATYARGLIQGE 219 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~ 219 (264)
++.+++.++++++
T Consensus 303 --~~~~~~~~~~~~~ 315 (321)
T TIGR00661 303 --RLLEAILDIRNMK 315 (321)
T ss_pred --HHHHHHHhccccc
Confidence 5666666666665
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.42 E-value=7e-12 Score=114.12 Aligned_cols=94 Identities=20% Similarity=0.186 Sum_probs=80.8
Q ss_pred eEecccCC-chhccCCCCccceeeccCchhHHHHHHhCcceeecCC----CchHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 130 LVVPSWAP-QIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPL----YAEQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 130 v~i~~~vp-q~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
+.+.+|+. ...+++.++ ++|+|+|.++++||+++|+|+|++|. ..+|..|+..+.+ .|.|+.+...+ ++
T Consensus 237 v~~~g~~~~~~~~~~~~d--~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~---~~ 310 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAAD--LVICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIPQSD---LT 310 (357)
T ss_pred EEEeehHhhHHHHHHhCC--EEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEccc---CC
Confidence 77788884 478999999 99999999999999999999999997 4689999999999 99999998766 78
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 042249 205 REEVATYARGLIQGEDGKLLRDKMRVLK 232 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~~~~~r~~a~~l~ 232 (264)
++.+.++|+++++|+ ++++++.+-+
T Consensus 311 ~~~l~~~i~~ll~~~---~~~~~~~~~~ 335 (357)
T PRK00726 311 PEKLAEKLLELLSDP---ERLEAMAEAA 335 (357)
T ss_pred HHHHHHHHHHHHcCH---HHHHHHHHHH
Confidence 999999999999986 5555544433
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.29 E-value=4.5e-11 Score=108.09 Aligned_cols=86 Identities=23% Similarity=0.219 Sum_probs=76.0
Q ss_pred CCeEecccC-CchhccCCCCccceeeccCchhHHHHHHhCcceeecCC----CchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVVPSWA-PQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPL----YAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i~~~v-pq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.|+.+.+|+ +...+|..++ ++|+++|.+|+.||+++|+|+|++|. ..+|..|+..+.+ .|.|+.+...+
T Consensus 235 ~~v~~~g~~~~~~~~l~~ad--~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~--- 308 (350)
T cd03785 235 VNYEVFPFIDDMAAAYAAAD--LVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLIPQEE--- 308 (350)
T ss_pred CCeEEeehhhhHHHHHHhcC--EEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCC---
Confidence 578888988 5577899999 89999999999999999999999986 4678999999999 99999998654
Q ss_pred CCHHHHHHHHHHHhcCC
Q 042249 203 VGREEVATYARGLIQGE 219 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~ 219 (264)
.+.+++.++|++++.++
T Consensus 309 ~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 309 LTPERLAAALLELLSDP 325 (350)
T ss_pred CCHHHHHHHHHHHhcCH
Confidence 68999999999999875
No 35
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.18 E-value=2e-09 Score=99.32 Aligned_cols=81 Identities=15% Similarity=0.193 Sum_probs=70.1
Q ss_pred CCeEecccCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHH-HHHHHHHhhcCceeEeeccCCCCCCH
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQK-MNAVLLTDDLKVAWRVKVNEDGLVGR 205 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~-~na~~v~~~~G~G~~l~~~~~~~~~~ 205 (264)
.++.+.+|+++ ..++..++ ++|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+ .|.|+.+ -++
T Consensus 265 ~~v~~~G~~~~~~~l~~aaD--v~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~-------~~~ 334 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACD--CIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFS-------ESP 334 (382)
T ss_pred CCeEEEeccccHHHHHHhCC--EEEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeec-------CCH
Confidence 36788899886 66888888 9999999999999999999999999777775 69999998 9999865 268
Q ss_pred HHHHHHHHHHhcC
Q 042249 206 EEVATYARGLIQG 218 (264)
Q Consensus 206 ~~l~~ai~~ll~~ 218 (264)
+++.++|.+++.+
T Consensus 335 ~~la~~i~~ll~~ 347 (382)
T PLN02605 335 KEIARIVAEWFGD 347 (382)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999987
No 36
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.15 E-value=2.3e-09 Score=99.37 Aligned_cols=135 Identities=13% Similarity=0.238 Sum_probs=95.4
Q ss_pred CCCcEEEEEecCCCCCCHHHHHHHHHHHHhc--CCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhc-CCC
Q 042249 52 PNGSVLFVCFGSGGSLSQKQLNELALGLEMS--GQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRT-KGV 128 (264)
Q Consensus 52 ~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~--~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~ 128 (264)
+++++|+++.|+.+. ...+..++.++.+. +.+++++++.+.. +-+.+.... ...
T Consensus 200 ~~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~~---------------------l~~~l~~~~~~~~ 256 (391)
T PRK13608 200 PDKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSKE---------------------LKRSLTAKFKSNE 256 (391)
T ss_pred CCCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCHH---------------------HHHHHHHHhccCC
Confidence 456788888898863 23344455553322 3466666554311 001111111 124
Q ss_pred CeEecccCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec-CCCchHHHHHHHHHhhcCceeEeeccCCCCCCHH
Q 042249 129 GLVVPSWAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW-PLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGRE 206 (264)
Q Consensus 129 nv~i~~~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 206 (264)
++.+.+|+++ ..++..++ +||+..|..|+.||+++|+|+|++ |.-+.|..|+..+.+ .|+|+... +.+
T Consensus 257 ~v~~~G~~~~~~~~~~~aD--l~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~-------~~~ 326 (391)
T PRK13608 257 NVLILGYTKHMNEWMASSQ--LMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD-------TPE 326 (391)
T ss_pred CeEEEeccchHHHHHHhhh--EEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC-------CHH
Confidence 7888899866 56888999 899998889999999999999998 665666789999999 99998752 578
Q ss_pred HHHHHHHHHhcCC
Q 042249 207 EVATYARGLIQGE 219 (264)
Q Consensus 207 ~l~~ai~~ll~~~ 219 (264)
++.++|.++++|+
T Consensus 327 ~l~~~i~~ll~~~ 339 (391)
T PRK13608 327 EAIKIVASLTNGN 339 (391)
T ss_pred HHHHHHHHHhcCH
Confidence 9999999999875
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.13 E-value=4e-09 Score=96.95 Aligned_cols=135 Identities=23% Similarity=0.310 Sum_probs=96.4
Q ss_pred CCCcEEEEEecCCCCCCHHHHHHHHHHHHhc-CCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhc--CCC
Q 042249 52 PNGSVLFVCFGSGGSLSQKQLNELALGLEMS-GQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRT--KGV 128 (264)
Q Consensus 52 ~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~-~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~ 128 (264)
+++++|++..|+.+.. +.+..++.++.+. +.+++++.+.+.. +-+.+.+.. .+.
T Consensus 200 ~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~---------------------~~~~l~~~~~~~~~ 256 (380)
T PRK13609 200 PNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEA---------------------LKQSLEDLQETNPD 256 (380)
T ss_pred CCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHH---------------------HHHHHHHHHhcCCC
Confidence 3556788888887632 2345667776654 4566666653211 001111111 124
Q ss_pred CeEecccCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec-CCCchHHHHHHHHHhhcCceeEeeccCCCCCCHH
Q 042249 129 GLVVPSWAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW-PLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGRE 206 (264)
Q Consensus 129 nv~i~~~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 206 (264)
|+.+.+|+++ ..++..++ ++|+.+|..|+.||+++|+|+|+. |..+.+..|+..+.+ .|+|+.. -+.+
T Consensus 257 ~v~~~g~~~~~~~l~~~aD--~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~-------~~~~ 326 (380)
T PRK13609 257 ALKVFGYVENIDELFRVTS--CMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVI-------RDDE 326 (380)
T ss_pred cEEEEechhhHHHHHHhcc--EEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEE-------CCHH
Confidence 7888899987 47899999 899999989999999999999995 666677889998888 8998764 3579
Q ss_pred HHHHHHHHHhcCC
Q 042249 207 EVATYARGLIQGE 219 (264)
Q Consensus 207 ~l~~ai~~ll~~~ 219 (264)
++.++|.++++|+
T Consensus 327 ~l~~~i~~ll~~~ 339 (380)
T PRK13609 327 EVFAKTEALLQDD 339 (380)
T ss_pred HHHHHHHHHHCCH
Confidence 9999999999876
No 38
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.02 E-value=3.2e-09 Score=95.86 Aligned_cols=77 Identities=23% Similarity=0.251 Sum_probs=67.8
Q ss_pred CchhccCCCCccceeeccCchhHHHHHHhCcceeecCCC---chHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHH
Q 042249 137 PQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLY---AEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYAR 213 (264)
Q Consensus 137 pq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~ 213 (264)
+...+|..++ ++|+++|.+++.||+++|+|+|++|.. .+|..|+..+.+ .+.|+.+...+ .++++|.++|+
T Consensus 243 ~~~~~l~~ad--~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~~~~---~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAAD--LVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIRQKE---LLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCC--EEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEeccc---CCHHHHHHHHH
Confidence 4577899999 899999988999999999999999863 467889999998 99999887765 68999999999
Q ss_pred HHhcCC
Q 042249 214 GLIQGE 219 (264)
Q Consensus 214 ~ll~~~ 219 (264)
+++.|+
T Consensus 317 ~ll~~~ 322 (348)
T TIGR01133 317 KLLLDP 322 (348)
T ss_pred HHHcCH
Confidence 999876
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.91 E-value=5e-09 Score=92.90 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=76.0
Q ss_pred CcEEEEEecCCCCCCHHHHHHHHHHHHhc--CCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhc-CCCCe
Q 042249 54 GSVLFVCFGSGGSLSQKQLNELALGLEMS--GQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRT-KGVGL 130 (264)
Q Consensus 54 ~~vVyvs~GS~~~~~~~~~~~l~~al~~~--~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv 130 (264)
.+.|+|+||.... ......++.++.+. +..+.++++.... ..+.+.+.. ..+|+
T Consensus 170 ~~~iLi~~GG~d~--~~~~~~~l~~l~~~~~~~~i~vv~G~~~~---------------------~~~~l~~~~~~~~~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADP--DNLTLKLLSALAESQINISITLVTGSSNP---------------------NLDELKKFAKEYPNI 226 (279)
T ss_pred cCeEEEEeCCcCC--cCHHHHHHHHHhccccCceEEEEECCCCc---------------------CHHHHHHHHHhCCCE
Confidence 3578999986543 22344566666653 3567777765422 112222222 13478
Q ss_pred EecccCCch-hccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHH
Q 042249 131 VVPSWAPQI-QVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVL 184 (264)
Q Consensus 131 ~i~~~vpq~-~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~ 184 (264)
.+..|+++. .++..++ ++||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 227 ~~~~~~~~m~~lm~~aD--l~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 227 ILFIDVENMAELMNEAD--LAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred EEEeCHHHHHHHHHHCC--EEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 888999884 7899999 9999999 9999999999999999999999999875
No 40
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.88 E-value=8.9e-08 Score=89.01 Aligned_cols=186 Identities=13% Similarity=-0.002 Sum_probs=107.9
Q ss_pred HHHHHHHhhhhccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhc---
Q 042249 6 GAFKALMKSRESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMS--- 82 (264)
Q Consensus 6 ~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~--- 82 (264)
.+-++++++ +. ++++||--..+.-.. .... .-.+++++|.+-.||...--.+.+..++.++..+
T Consensus 170 ~t~~~l~~~-----g~-k~~~vGnPv~d~l~~--~~~~-----~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~ 236 (396)
T TIGR03492 170 LTARDLRRQ-----GV-RASYLGNPMMDGLEP--PERK-----PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS 236 (396)
T ss_pred HHHHHHHHC-----CC-eEEEeCcCHHhcCcc--cccc-----ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC
Confidence 445566663 34 799999776654321 1111 1123456899999998543333344455555443
Q ss_pred -CCeEEEEEeCCCcccccccccccCCCCCCCCCCCCCh-hhhhhcCCCCeEecccC-CchhccCCCCccceeeccCchhH
Q 042249 83 -GQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPK-GFLDRTKGVGLVVPSWA-PQIQVLSHGSTGGFLSHCGWNSV 159 (264)
Q Consensus 83 -~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-~~~~~~~~~nv~i~~~v-pq~~lL~~~~~~~~ItHGG~~si 159 (264)
+..|+|.+.+..........+...+. .. ..+. +-.......++.+..|. ....++..++ ++|+..|..|
T Consensus 237 ~~~~~v~~~~~~~~~~~~~~~l~~~g~---~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~AD--lvI~rSGt~T- 308 (396)
T TIGR03492 237 QPFVFLAAIVPSLSLEKLQAILEDLGW---QL--EGSSEDQTSLFQKGTLEVLLGRGAFAEILHWAD--LGIAMAGTAT- 308 (396)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHhcCc---ee--cCCccccchhhccCceEEEechHhHHHHHHhCC--EEEECcCHHH-
Confidence 56788877432210000000000000 00 0000 00000112235554454 3467888999 9999999877
Q ss_pred HHHHHhCcceeecCCCchHHHHHHHHHhhc----CceeEeeccCCCCCCHHHHHHHHHHHhcCC
Q 042249 160 LESIVHGVPIIAWPLYAEQKMNAVLLTDDL----KVAWRVKVNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 160 ~eal~~GvP~l~~P~~~DQ~~na~~v~~~~----G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
.|+...|+|+|.+|.-..|. |+..+++ . |.++.+.. .+.+.|.+++.+++.|+
T Consensus 309 ~E~a~lg~P~Ilip~~~~q~-na~~~~~-~~~l~g~~~~l~~-----~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 309 EQAVGLGKPVIQLPGKGPQF-TYGFAEA-QSRLLGGSVFLAS-----KNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHHHHhCCCEEEEeCCCCHH-HHHHHHh-hHhhcCCEEecCC-----CCHHHHHHHHHHHHcCH
Confidence 99999999999999877776 9876666 4 66666654 45699999999999875
No 41
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.88 E-value=2e-08 Score=92.99 Aligned_cols=105 Identities=13% Similarity=0.070 Sum_probs=82.5
Q ss_pred chhccCCCCccceeeccCchhHHHHHHhCcceeec----CCCc---------hHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 138 QIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW----PLYA---------EQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 138 q~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~----P~~~---------DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
...++..++ ++|+..|..|+ |++++|+|+|++ |+.. .|..|+..+.. .++...+...+ +|
T Consensus 261 ~~~~l~aAD--l~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~q~~---~~ 333 (385)
T TIGR00215 261 ARKAMFAAD--AALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELLQEE---CT 333 (385)
T ss_pred HHHHHHhCC--EEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-CccchhhcCCC---CC
Confidence 456888899 99999999988 999999999999 8632 26779999999 99999987776 99
Q ss_pred HHHHHHHHHHHhcCC----c-hHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Q 042249 205 REEVATYARGLIQGE----D-GKLLRDKMRVLKDAAANALSPDGFSTKSLANVA 253 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~----~-~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~ 253 (264)
++.|.+.+.+++.|+ + .+.+++...++.+.+. ++|.+......++
T Consensus 334 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~a~~i~ 383 (385)
T TIGR00215 334 PHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIY----CNADSERAAQAVL 383 (385)
T ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHh
Confidence 999999999999886 3 4556666666666553 5566665554443
No 42
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.75 E-value=1.2e-07 Score=86.89 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=57.9
Q ss_pred chhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHH-HHH------------HHHHhhcCceeEeeccCCCCCC
Q 042249 138 QIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQK-MNA------------VLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 138 q~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~-~na------------~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
-..++..++ ++|+.+|.+++ ||+++|+|+|++|....-+ ..+ ..+.+ .+++..+.... .+
T Consensus 255 ~~~~~~~aD--l~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~---~~ 327 (380)
T PRK00025 255 KREAMAAAD--AALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG-RELVPELLQEE---AT 327 (380)
T ss_pred HHHHHHhCC--EEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC-CCcchhhcCCC---CC
Confidence 367888899 99999999888 9999999999996432222 122 22222 33333333333 68
Q ss_pred HHHHHHHHHHHhcCCc-hHHHHHHHHHHHH
Q 042249 205 REEVATYARGLIQGED-GKLLRDKMRVLKD 233 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~-~~~~r~~a~~l~~ 233 (264)
++++.+.+.+++.|++ .++++++++++.+
T Consensus 328 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 357 (380)
T PRK00025 328 PEKLARALLPLLADGARRQALLEGFTELHQ 357 (380)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999873 2234444433333
No 43
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.60 E-value=7.2e-07 Score=79.93 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=77.6
Q ss_pred CCCeEecccCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeecCCCc---hHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 127 GVGLVVPSWAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYA---EQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 127 ~~nv~i~~~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~---DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.+++.+..|-.+ ..++..++ .+|+-||.||+.|-+.+|+|.+++|... +|-.-|.|+++ +|+.-.+.+++
T Consensus 276 ~p~i~I~~f~~~~~~ll~gA~--~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe~--- 349 (400)
T COG4671 276 RPHISIFEFRNDFESLLAGAR--LVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPEN--- 349 (400)
T ss_pred CCCeEEEEhhhhHHHHHHhhh--eeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCccc---
Confidence 468999999876 56777777 9999999999999999999999999843 89999999999 99999998888
Q ss_pred CCHHHHHHHHHHHhcCC
Q 042249 203 VGREEVATYARGLIQGE 219 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~ 219 (264)
+++..+.++|...++.+
T Consensus 350 lt~~~La~al~~~l~~P 366 (400)
T COG4671 350 LTPQNLADALKAALARP 366 (400)
T ss_pred CChHHHHHHHHhcccCC
Confidence 99999999999999833
No 44
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.39 E-value=4.9e-06 Score=66.03 Aligned_cols=115 Identities=19% Similarity=0.215 Sum_probs=76.6
Q ss_pred cEEEEEecCCCCCCHHHH-----HHHHHHHHhcCC-eEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCC
Q 042249 55 SVLFVCFGSGGSLSQKQL-----NELALGLEMSGQ-RFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGV 128 (264)
Q Consensus 55 ~vVyvs~GS~~~~~~~~~-----~~l~~al~~~~~-~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 128 (264)
..+||+-||.. -.+.+ ++....|.+.|. +.+..++.... ..++......+..
T Consensus 4 ~~vFVTVGtT~--Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~--------------------~~~d~~~~~~k~~ 61 (170)
T KOG3349|consen 4 MTVFVTVGTTS--FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP--------------------FFGDPIDLIRKNG 61 (170)
T ss_pred eEEEEEecccc--HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc--------------------CCCCHHHhhcccC
Confidence 36999999975 22222 235566777775 66677766422 0122222111222
Q ss_pred CeE--ecccCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeecCC----CchHHHHHHHHHhhcCceeE
Q 042249 129 GLV--VPSWAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPL----YAEQKMNAVLLTDDLKVAWR 194 (264)
Q Consensus 129 nv~--i~~~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~G~G~~ 194 (264)
++. ..+|-|- ......++ ++|+|+|+||++|.+..|+|.|+++- ...|..-|..+++ .|-=..
T Consensus 62 gl~id~y~f~psl~e~I~~Ad--lVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~-egyL~~ 131 (170)
T KOG3349|consen 62 GLTIDGYDFSPSLTEDIRSAD--LVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE-EGYLYY 131 (170)
T ss_pred CeEEEEEecCccHHHHHhhcc--EEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh-cCcEEE
Confidence 333 3456676 55667788 99999999999999999999999994 5678999999999 664443
No 45
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.27 E-value=2.5e-05 Score=69.57 Aligned_cols=80 Identities=18% Similarity=0.122 Sum_probs=62.9
Q ss_pred CCeEecccCCch---hccCCCCccceeeccC----chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLSHCG----WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~ItHGG----~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
.|+.+.+|+++. .++..++ ++|+.+. .+++.||+++|+|+|+.+..+ +...+.+ .+.|.....
T Consensus 247 ~~v~~~g~~~~~~~~~~~~~~d--~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~~--- 316 (364)
T cd03814 247 PNVHFLGFLDGEELAAAYASAD--VFVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVEP--- 316 (364)
T ss_pred CcEEEEeccCHHHHHHHHHhCC--EEEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcCC---
Confidence 478888998865 4788888 7776654 478999999999999988654 4445566 788888765
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 042249 201 GLVGREEVATYARGLIQGE 219 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~ 219 (264)
-+.+++.++|.+++.++
T Consensus 317 --~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 317 --GDAEAFAAALAALLADP 333 (364)
T ss_pred --CCHHHHHHHHHHHHcCH
Confidence 35788999999999886
No 46
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.17 E-value=0.00014 Score=67.98 Aligned_cols=84 Identities=20% Similarity=0.176 Sum_probs=59.9
Q ss_pred hhccCCCCccceee----ccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHH
Q 042249 139 IQVLSHGSTGGFLS----HCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARG 214 (264)
Q Consensus 139 ~~lL~~~~~~~~It----HGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ 214 (264)
..++..+++ +|+. -+|..+++||+++|+|+|+-|...++......+.+ .|+++.. -+.+++.++|.+
T Consensus 314 ~~~y~~aDi-~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~-------~d~~~La~~l~~ 384 (425)
T PRK05749 314 GLLYAIADI-AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQV-------EDAEDLAKAVTY 384 (425)
T ss_pred HHHHHhCCE-EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEE-------CCHHHHHHHHHH
Confidence 567778883 2442 13445699999999999999998888887777777 6766553 357999999999
Q ss_pred HhcCCc-hHHHHHHHHHH
Q 042249 215 LIQGED-GKLLRDKMRVL 231 (264)
Q Consensus 215 ll~~~~-~~~~r~~a~~l 231 (264)
+++|++ .+.|.+++++.
T Consensus 385 ll~~~~~~~~m~~~a~~~ 402 (425)
T PRK05749 385 LLTDPDARQAYGEAGVAF 402 (425)
T ss_pred HhcCHHHHHHHHHHHHHH
Confidence 998763 23344444433
No 47
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.11 E-value=3.5e-05 Score=68.98 Aligned_cols=147 Identities=16% Similarity=0.020 Sum_probs=87.3
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhcC-CeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEec
Q 042249 55 SVLFVCFGSGGSLSQKQLNELALGLEMSG-QRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVP 133 (264)
Q Consensus 55 ~vVyvs~GS~~~~~~~~~~~l~~al~~~~-~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~ 133 (264)
..+++..|+.. ..+.+..+++++.+.. ..+++...+... ..+.+-........||.+.
T Consensus 191 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~~~-------------------~~~~~~~~~~~~~~~V~~~ 249 (357)
T cd03795 191 RPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGPLE-------------------AELEALAAALGLLDRVRFL 249 (357)
T ss_pred CcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCChhH-------------------HHHHHHHHhcCCcceEEEc
Confidence 35667777764 2344555677776665 444443322111 0011111011224589999
Q ss_pred ccCCch---hccCCCCccceeec---cC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHH
Q 042249 134 SWAPQI---QVLSHGSTGGFLSH---CG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGRE 206 (264)
Q Consensus 134 ~~vpq~---~lL~~~~~~~~ItH---GG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 206 (264)
+|+|+. .++..+++.++.++ .| ..++.||+++|+|+|+....+....... . -+.|..... -+.+
T Consensus 250 g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~-~~~g~~~~~-----~d~~ 320 (357)
T cd03795 250 GRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---H-GVTGLVVPP-----GDPA 320 (357)
T ss_pred CCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---C-CCceEEeCC-----CCHH
Confidence 999974 57777884333332 33 3479999999999999876555443322 3 467777664 3689
Q ss_pred HHHHHHHHHhcCCc-hHHHHHHHHHH
Q 042249 207 EVATYARGLIQGED-GKLLRDKMRVL 231 (264)
Q Consensus 207 ~l~~ai~~ll~~~~-~~~~r~~a~~l 231 (264)
++.++|..++++++ .+.+++++++.
T Consensus 321 ~~~~~i~~l~~~~~~~~~~~~~~~~~ 346 (357)
T cd03795 321 ALAEAIRRLLEDPELRERLGEAARER 346 (357)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999998863 23344444443
No 48
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.03 E-value=0.00039 Score=61.78 Aligned_cols=93 Identities=14% Similarity=0.160 Sum_probs=64.3
Q ss_pred CCeEecccCCch---hccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
.++.+.+++|+. .++..++ ++|.. +...++.||+++|+|+|+.+.. ..+..+.+ .+.|..+...+
T Consensus 259 ~~v~~~g~~~~~~~~~~~~~ad--~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~-~~~g~~~~~~~- 330 (374)
T cd03817 259 DRVIFTGFVPREELPDYYKAAD--LFVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVAD-GENGFLFPPGD- 330 (374)
T ss_pred CcEEEeccCChHHHHHHHHHcC--EEEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhheec-CceeEEeCCCC-
Confidence 478888999875 4677888 55533 3347899999999999997653 34455555 67888887643
Q ss_pred CCCCHHHHHHHHHHHhcCCc-hHHHHHHHHHHHH
Q 042249 201 GLVGREEVATYARGLIQGED-GKLLRDKMRVLKD 233 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~~-~~~~r~~a~~l~~ 233 (264)
. ++.+++.+++++++ .+.+++++++..+
T Consensus 331 ----~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 359 (374)
T cd03817 331 ----E-ALAEALLRLLQDPELRRRLSKNAEESAE 359 (374)
T ss_pred ----H-HHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 2 99999999998763 2234444444433
No 49
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.96 E-value=0.00011 Score=64.43 Aligned_cols=167 Identities=14% Similarity=0.118 Sum_probs=110.7
Q ss_pred EeecccccCCCCCCCChhhHH-HhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCccccccccc
Q 042249 25 YPVGPLILTGSINESDRTDCL-KWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYF 103 (264)
Q Consensus 25 ~~vGpl~~~~~~~~~~~~~~~-~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~ 103 (264)
++.||=+..-.+ .--.+. +.+.+ +..-|+|++|-.- +....-+++..+.+..+.+-.+++....
T Consensus 133 ~~lGp~y~~lr~---eF~~~r~~~~~r--~~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~p-------- 197 (318)
T COG3980 133 YYLGPGYAPLRP---EFYALREENTER--PKRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSNP-------- 197 (318)
T ss_pred EEecCCceeccH---HHHHhHHHHhhc--chheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCCc--------
Confidence 788887765321 000111 12222 2234899988532 4456667888888887666666653221
Q ss_pred ccCCCCCCCCCCCCChhhhhhc-CCCCeEecccCC-chhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHH
Q 042249 104 GVHGMKEENPFDYLPKGFLDRT-KGVGLVVPSWAP-QIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMN 181 (264)
Q Consensus 104 ~~~~~~~~~~~~~lp~~~~~~~-~~~nv~i~~~vp-q~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~n 181 (264)
-+..+..+. ..+|+.+..... ...++..++ +.|+-||. |++|++..|+|.+++|+...|..-
T Consensus 198 -------------~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d--~aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~ 261 (318)
T COG3980 198 -------------TLKNLRKRAEKYPNINLYIDTNDMAELMKEAD--LAISAAGS-TLYEALLLGVPSLVLPLAENQIAT 261 (318)
T ss_pred -------------chhHHHHHHhhCCCeeeEecchhHHHHHHhcc--hheeccch-HHHHHHHhcCCceEEeeeccHHHH
Confidence 122233333 245676655554 345777888 88988875 999999999999999999999999
Q ss_pred HHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042249 182 AVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRV 230 (264)
Q Consensus 182 a~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~ 230 (264)
|..++. +|+-..+... ++.......+.+++.|. ..|.+.-.
T Consensus 262 a~~f~~-lg~~~~l~~~----l~~~~~~~~~~~i~~d~---~~rk~l~~ 302 (318)
T COG3980 262 AKEFEA-LGIIKQLGYH----LKDLAKDYEILQIQKDY---ARRKNLSF 302 (318)
T ss_pred HHHHHh-cCchhhccCC----CchHHHHHHHHHhhhCH---HHhhhhhh
Confidence 999999 8888777644 56777777788888875 45554433
No 50
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.94 E-value=5.3e-05 Score=61.29 Aligned_cols=80 Identities=20% Similarity=0.211 Sum_probs=59.7
Q ss_pred CCeEecccCC--c-hhccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 128 VGLVVPSWAP--Q-IQVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 128 ~nv~i~~~vp--q-~~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
.++.+.++.+ + ..++..++ ++|+. |...++.||+++|+|+|+.. ...+...+.+ ...|..+..
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~d--i~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~-~~~g~~~~~--- 142 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSD--IFVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIIND-GVNGFLFDP--- 142 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTS--EEEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGT-TTSEEEEST---
T ss_pred ccccccccccccccccccccce--eccccccccccccccccccccccceeecc----ccCCceeecc-ccceEEeCC---
Confidence 4787888887 2 56778888 67766 56679999999999999854 4445555666 667888876
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 042249 201 GLVGREEVATYARGLIQGE 219 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~ 219 (264)
.+.+++.++|.+++.++
T Consensus 143 --~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 143 --NDIEELADAIEKLLNDP 159 (172)
T ss_dssp --TSHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHCCH
Confidence 47899999999999875
No 51
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.94 E-value=0.00016 Score=66.16 Aligned_cols=84 Identities=14% Similarity=0.090 Sum_probs=60.5
Q ss_pred CCeEecccCCc---hhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 128 VGLVVPSWAPQ---IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 128 ~nv~i~~~vpq---~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
.++++.+.+++ ..++..++ ++|+-.|. .+.||+++|+|+|.++...+++. +.. .|.++.+. .+
T Consensus 255 ~~v~~~~~~~~~~~~~~l~~ad--~vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~-~g~~~lv~------~d 320 (365)
T TIGR00236 255 KRVHLIEPLEYLDFLNLAANSH--LILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVE-AGTNKLVG------TD 320 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCC--EEEECChh-HHHHHHHcCCCEEECCCCCCChH----HHh-cCceEEeC------CC
Confidence 46777765554 45677888 78887664 47999999999999976555542 344 57776552 36
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHH
Q 042249 205 REEVATYARGLIQGEDGKLLRDKM 228 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~~~~~r~~a 228 (264)
.++|.+++.++++++ ..+++.
T Consensus 321 ~~~i~~ai~~ll~~~---~~~~~~ 341 (365)
T TIGR00236 321 KENITKAAKRLLTDP---DEYKKM 341 (365)
T ss_pred HHHHHHHHHHHHhCh---HHHHHh
Confidence 899999999999875 555443
No 52
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.92 E-value=0.00087 Score=59.35 Aligned_cols=81 Identities=19% Similarity=0.083 Sum_probs=60.2
Q ss_pred CCCeEecccCCch---hccCCCCccceee----ccC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc
Q 042249 127 GVGLVVPSWAPQI---QVLSHGSTGGFLS----HCG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN 198 (264)
Q Consensus 127 ~~nv~i~~~vpq~---~lL~~~~~~~~It----HGG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 198 (264)
..++.+.+|+++. .++..++ ++|. ..| ..++.||+++|+|+|+.+.. .....+.+ .+.|+.+...
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~ad--~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~~ 314 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEID--VLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRD-GVNGLLFPPG 314 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCC--EEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcC-CCcEEEECCC
Confidence 3578888999764 4588888 5553 233 35899999999999997653 34455566 5678877663
Q ss_pred CCCCCCHHHHHHHHHHHhcCC
Q 042249 199 EDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 199 ~~~~~~~~~l~~ai~~ll~~~ 219 (264)
+.+++.+++.++++++
T Consensus 315 -----d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 315 -----DAEDLAAALERLIDDP 330 (359)
T ss_pred -----CHHHHHHHHHHHHhCh
Confidence 5899999999999876
No 53
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.91 E-value=0.0011 Score=58.12 Aligned_cols=81 Identities=16% Similarity=0.158 Sum_probs=61.1
Q ss_pred CCCeEecccCCc---hhccCCCCccceee----ccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC
Q 042249 127 GVGLVVPSWAPQ---IQVLSHGSTGGFLS----HCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE 199 (264)
Q Consensus 127 ~~nv~i~~~vpq---~~lL~~~~~~~~It----HGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 199 (264)
..++.+.+++++ ..++..++ ++|. -|..+++.||+++|+|+|+.+. ......+.+ .+.|+.+..
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~d--i~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~-~~~g~~~~~-- 325 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAAD--VFVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED-GETGLLVPP-- 325 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcC--EEEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC-CcceEEeCC--
Confidence 347888899964 45778888 5553 2456799999999999999776 334555665 677877765
Q ss_pred CCCCCHHHHHHHHHHHhcCC
Q 042249 200 DGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 200 ~~~~~~~~l~~ai~~ll~~~ 219 (264)
.+.+++.++|.+++.++
T Consensus 326 ---~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 326 ---GDPEALAEAILRLLDDP 342 (374)
T ss_pred ---CCHHHHHHHHHHHHcCh
Confidence 35899999999999876
No 54
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.88 E-value=0.00024 Score=64.63 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=61.0
Q ss_pred CCeEecccCCchh---ccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 128 VGLVVPSWAPQIQ---VLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 128 ~nv~i~~~vpq~~---lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
.|+.+.+|+|+.. ++..++ ++++. |-..++.||+++|+|+|+.+..+ ....+.+ .+.|..+..
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~ad--i~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~-~~~g~~~~~--- 352 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAAD--VFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVD-GVTGLLVDP--- 352 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCC--EEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccC-CCCeEEeCC---
Confidence 4788999998754 578888 66643 22368999999999999876543 4445666 678888765
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 042249 201 GLVGREEVATYARGLIQGE 219 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~ 219 (264)
-+.+++.++|.+++.++
T Consensus 353 --~~~~~l~~~i~~l~~~~ 369 (398)
T cd03800 353 --RDPEALAAALRRLLTDP 369 (398)
T ss_pred --CCHHHHHHHHHHHHhCH
Confidence 36899999999999875
No 55
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.86 E-value=0.00014 Score=65.97 Aligned_cols=135 Identities=13% Similarity=0.053 Sum_probs=83.3
Q ss_pred CCcEEEEEecCCCCC-CHHHHHHHHHHHHhcCCe-EEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcC--CC
Q 042249 53 NGSVLFVCFGSGGSL-SQKQLNELALGLEMSGQR-FLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTK--GV 128 (264)
Q Consensus 53 ~~~vVyvs~GS~~~~-~~~~~~~l~~al~~~~~~-viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~ 128 (264)
+++.+++++|..... ..+.+..+++++...... +.++...... ....+-+ ...... ..
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~-----------------~~~~l~~-~~~~~~~~~~ 258 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR-----------------TRPRIRE-AGLEFLGHHP 258 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC-----------------hHHHHHH-HHHhhccCCC
Confidence 456788888876543 356677788887765332 3443332211 0001111 111111 34
Q ss_pred CeEecccCCc---hhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCH
Q 042249 129 GLVVPSWAPQ---IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGR 205 (264)
Q Consensus 129 nv~i~~~vpq---~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 205 (264)
++.+.++.++ ..++..++ +||+..| |.+.||+++|+|+|.++.. |. +..+.+ .|+++.+. -+.
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad--~~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~------~~~ 324 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNAD--LVLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVG------TDP 324 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCc--EEEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecC------CCH
Confidence 7777665543 35677788 9999998 7788999999999998743 22 334555 67666553 247
Q ss_pred HHHHHHHHHHhcCC
Q 042249 206 EEVATYARGLIQGE 219 (264)
Q Consensus 206 ~~l~~ai~~ll~~~ 219 (264)
++|.++|.++++++
T Consensus 325 ~~i~~~i~~ll~~~ 338 (363)
T cd03786 325 EAILAAIEKLLSDE 338 (363)
T ss_pred HHHHHHHHHHhcCc
Confidence 99999999999875
No 56
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.86 E-value=0.00026 Score=65.98 Aligned_cols=112 Identities=18% Similarity=0.197 Sum_probs=71.8
Q ss_pred CCeEecccCCch---hccCCCCccceee--c-------cCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeE
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLS--H-------CGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWR 194 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~It--H-------GG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 194 (264)
.++.+.+|+|+. .++..++ +||. + -|. .+++||+++|+|+|+....+ ....+.+ -..|+.
T Consensus 279 ~~V~~~G~~~~~el~~~l~~aD--v~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~-~~~G~l 351 (406)
T PRK15427 279 DVVEMPGFKPSHEVKAMLDDAD--VFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEA-DKSGWL 351 (406)
T ss_pred CeEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcC-CCceEE
Confidence 468899999874 4678888 5554 2 243 67899999999999976533 2334444 557877
Q ss_pred eeccCCCCCCHHHHHHHHHHHhc-CCc-hHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHh
Q 042249 195 VKVNEDGLVGREEVATYARGLIQ-GED-GKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKN 258 (264)
Q Consensus 195 l~~~~~~~~~~~~l~~ai~~ll~-~~~-~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 258 (264)
+... +.+++.++|.++++ |++ .+.+.+++++..+ ..-+.....+++.+-+++
T Consensus 352 v~~~-----d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~-------~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 352 VPEN-----DAQALAQRLAAFSQLDTDELAPVVKRAREKVE-------TDFNQQVINRELASLLQA 405 (406)
T ss_pred eCCC-----CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHhh
Confidence 7653 68999999999998 762 2234444333222 233444445555554443
No 57
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.85 E-value=0.0021 Score=57.60 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=56.7
Q ss_pred CeEecccCC-c---hhccCCCCccceeecc----CchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 129 GLVVPSWAP-Q---IQVLSHGSTGGFLSHC----GWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 129 nv~i~~~vp-q---~~lL~~~~~~~~ItHG----G~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
++.+.+|++ + ..++..++ ++|... ...++.||+++|+|+|+....+ ....+.+ .+.|+.+..
T Consensus 245 ~v~~~g~~~~~~~~~~~~~~ad--~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~-~~~g~~~~~--- 314 (365)
T cd03825 245 PVHYLGSLNDDESLALIYSAAD--VFVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDH-GVTGYLAKP--- 314 (365)
T ss_pred ceEecCCcCCHHHHHHHHHhCC--EEEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeC-CCceEEeCC---
Confidence 677888988 3 35688888 666643 3579999999999999875432 2223334 456766654
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 042249 201 GLVGREEVATYARGLIQGE 219 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~ 219 (264)
.+.+++.+++.++++++
T Consensus 315 --~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 315 --GDPEDLAEGIEWLLADP 331 (365)
T ss_pred --CCHHHHHHHHHHHHhCH
Confidence 36899999999999876
No 58
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.85 E-value=0.00023 Score=62.33 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=56.6
Q ss_pred CCeEecccCC-chhccCCCCccceeecc----CchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcC-ceeEeeccCCC
Q 042249 128 VGLVVPSWAP-QIQVLSHGSTGGFLSHC----GWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLK-VAWRVKVNEDG 201 (264)
Q Consensus 128 ~nv~i~~~vp-q~~lL~~~~~~~~ItHG----G~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~ 201 (264)
.++.+.++.. ...++..++ ++|.-. ..+++.||+++|+|+|+.+....+. .+.. .+ .|+.+..
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad--~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~-~~~~g~~~~~---- 303 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKAS--IFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIE-DGVNGLLVPN---- 303 (348)
T ss_pred CeEEEcCCcchHHHHHHhCC--EEEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhc-cCcceEEeCC----
Confidence 3566666633 356788888 555543 2578999999999999976544332 2334 44 7877765
Q ss_pred CCCHHHHHHHHHHHhcCC
Q 042249 202 LVGREEVATYARGLIQGE 219 (264)
Q Consensus 202 ~~~~~~l~~ai~~ll~~~ 219 (264)
.+.+++.++|.+++.++
T Consensus 304 -~~~~~~~~~i~~ll~~~ 320 (348)
T cd03820 304 -GDVEALAEALLRLMEDE 320 (348)
T ss_pred -CCHHHHHHHHHHHHcCH
Confidence 36799999999999987
No 59
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.84 E-value=0.00047 Score=61.35 Aligned_cols=81 Identities=14% Similarity=0.096 Sum_probs=58.6
Q ss_pred CCCeEecccCCch---hccCCCCccceeeccC---------chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeE
Q 042249 127 GVGLVVPSWAPQI---QVLSHGSTGGFLSHCG---------WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWR 194 (264)
Q Consensus 127 ~~nv~i~~~vpq~---~lL~~~~~~~~ItHGG---------~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 194 (264)
.+|+.+.+++++. .++..++ ++|.... .+++.||+++|+|+|+.+..+.+.. +.+ .+.|..
T Consensus 274 ~~~v~~~g~~~~~~~~~~~~~~d--i~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~-~~~g~~ 346 (394)
T cd03794 274 LDNVTFLGRVPKEELPELLAAAD--VGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEE-AGAGLV 346 (394)
T ss_pred CCcEEEeCCCChHHHHHHHHhhC--eeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hcc-CCcceE
Confidence 3578888898764 4677888 5553222 3458999999999999987655433 233 467777
Q ss_pred eeccCCCCCCHHHHHHHHHHHhcCC
Q 042249 195 VKVNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 195 l~~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
+... +.+++.++|.+++.++
T Consensus 347 ~~~~-----~~~~l~~~i~~~~~~~ 366 (394)
T cd03794 347 VPPG-----DPEALAAAILELLDDP 366 (394)
T ss_pred eCCC-----CHHHHHHHHHHHHhCh
Confidence 7653 6899999999999776
No 60
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.81 E-value=0.0003 Score=63.49 Aligned_cols=80 Identities=16% Similarity=0.083 Sum_probs=60.8
Q ss_pred CCeEecccCCch---hccCCCCccceeec----------cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeE
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLSH----------CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWR 194 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~ItH----------GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 194 (264)
.++.+.+++|+. .++..++ ++|.. |-.+++.||+++|+|+|+-+..+ +...+.+ .+.|..
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~ad--~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~-~~~g~~ 317 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRAR--IFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVED-GETGLL 317 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhCC--EEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheec-CCeeEE
Confidence 468888898764 4588888 55532 23579999999999999987643 5555666 678887
Q ss_pred eeccCCCCCCHHHHHHHHHHHhcCC
Q 042249 195 VKVNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 195 l~~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
+.. -+.+++.++|.+++.++
T Consensus 318 ~~~-----~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 318 VPE-----GDVAALAAALGRLLADP 337 (367)
T ss_pred ECC-----CCHHHHHHHHHHHHcCH
Confidence 765 36799999999999876
No 61
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.81 E-value=0.00013 Score=65.82 Aligned_cols=127 Identities=13% Similarity=0.142 Sum_probs=82.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccC
Q 042249 57 LFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWA 136 (264)
Q Consensus 57 Vyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~v 136 (264)
.++..|+.. ..+.+..++++++..+.+++++-.+... +.+.+ ....|+.+.+|+
T Consensus 197 ~il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~~~-----------------------~~l~~-~~~~~V~~~g~~ 250 (351)
T cd03804 197 YYLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGPEL-----------------------DRLRA-KAGPNVTFLGRV 250 (351)
T ss_pred EEEEEEcCc--cccChHHHHHHHHHCCCcEEEEECChhH-----------------------HHHHh-hcCCCEEEecCC
Confidence 345567765 3345666778887777665554433211 11111 224589999999
Q ss_pred Cc---hhccCCCCccceeeccCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHH
Q 042249 137 PQ---IQVLSHGSTGGFLSHCGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYA 212 (264)
Q Consensus 137 pq---~~lL~~~~~~~~ItHGG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai 212 (264)
|+ ..++..+++-++-+.-|. .++.||+++|+|+|+....+ ....+.+ -+.|+.+... +.+++.++|
T Consensus 251 ~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~~~-----~~~~la~~i 320 (351)
T cd03804 251 SDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFEEQ-----TVESLAAAV 320 (351)
T ss_pred CHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeCCC-----CHHHHHHHH
Confidence 97 457888884333234333 46789999999999986533 2333455 5678887653 688999999
Q ss_pred HHHhcCC
Q 042249 213 RGLIQGE 219 (264)
Q Consensus 213 ~~ll~~~ 219 (264)
..+++++
T Consensus 321 ~~l~~~~ 327 (351)
T cd03804 321 ERFEKNE 327 (351)
T ss_pred HHHHhCc
Confidence 9999886
No 62
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.81 E-value=0.00049 Score=65.16 Aligned_cols=138 Identities=18% Similarity=0.147 Sum_probs=84.9
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhcC-CeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecc
Q 042249 56 VLFVCFGSGGSLSQKQLNELALGLEMSG-QRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPS 134 (264)
Q Consensus 56 vVyvs~GS~~~~~~~~~~~l~~al~~~~-~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~ 134 (264)
.+++..|+.. ..+.+..++.+++..+ .++++ ++.... -+.+.+.....++.+.+
T Consensus 264 ~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~i-vG~G~~----------------------~~~l~~~~~~~~V~f~G 318 (465)
T PLN02871 264 PLIVYVGRLG--AEKNLDFLKRVMERLPGARLAF-VGDGPY----------------------REELEKMFAGTPTVFTG 318 (465)
T ss_pred eEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEEE-EeCChH----------------------HHHHHHHhccCCeEEec
Confidence 4556668775 3344556677776653 45444 443211 12233333345788889
Q ss_pred cCCc---hhccCCCCccceeeccC----chhHHHHHHhCcceeecCCCchHHHHHHHHHhh---cCceeEeeccCCCCCC
Q 042249 135 WAPQ---IQVLSHGSTGGFLSHCG----WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDD---LKVAWRVKVNEDGLVG 204 (264)
Q Consensus 135 ~vpq---~~lL~~~~~~~~ItHGG----~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~---~G~G~~l~~~~~~~~~ 204 (264)
|+|. ..++..++ +||.-.. ..++.||+++|+|+|+....+ . ..+... -+.|+.+... +
T Consensus 319 ~v~~~ev~~~~~~aD--v~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~-~eiv~~~~~~~~G~lv~~~-----d 386 (465)
T PLN02871 319 MLQGDELSQAYASGD--VFVMPSESETLGFVVLEAMASGVPVVAARAGG----I-PDIIPPDQEGKTGFLYTPG-----D 386 (465)
T ss_pred cCCHHHHHHHHHHCC--EEEECCcccccCcHHHHHHHcCCCEEEcCCCC----c-HhhhhcCCCCCceEEeCCC-----C
Confidence 9975 34788888 6664432 357899999999999876532 1 112221 4678877653 6
Q ss_pred HHHHHHHHHHHhcCCc-hHHHHHHHHH
Q 042249 205 REEVATYARGLIQGED-GKLLRDKMRV 230 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~-~~~~r~~a~~ 230 (264)
.+++.++|.++++|++ .+.+.+++++
T Consensus 387 ~~~la~~i~~ll~~~~~~~~~~~~a~~ 413 (465)
T PLN02871 387 VDDCVEKLETLLADPELRERMGAAARE 413 (465)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 8999999999998763 2334444444
No 63
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.81 E-value=0.0025 Score=56.16 Aligned_cols=81 Identities=17% Similarity=0.111 Sum_probs=60.5
Q ss_pred CCCeEecccCCch---hccCCCCcccee--e--ccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC
Q 042249 127 GVGLVVPSWAPQI---QVLSHGSTGGFL--S--HCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE 199 (264)
Q Consensus 127 ~~nv~i~~~vpq~---~lL~~~~~~~~I--t--HGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 199 (264)
..|+.+.+++++. .++..++ ++| + -|..+++.||+++|+|+|+.+..+ ....+.+ .+.|..+..
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad--~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~-~~~g~~~~~-- 328 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAAD--VFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITD-GENGLLVPP-- 328 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcC--eeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcC-CcceeEECC--
Confidence 3478888999864 5677788 444 2 245678999999999999876543 3445566 667777765
Q ss_pred CCCCCHHHHHHHHHHHhcCC
Q 042249 200 DGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 200 ~~~~~~~~l~~ai~~ll~~~ 219 (264)
-+.+++.++|.+++.++
T Consensus 329 ---~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 329 ---GDPEALAEAILRLLADP 345 (377)
T ss_pred ---CCHHHHHHHHHHHhcCc
Confidence 36899999999999886
No 64
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.79 E-value=0.00083 Score=59.06 Aligned_cols=80 Identities=18% Similarity=0.123 Sum_probs=58.4
Q ss_pred CCeEecccCCc-hhccCCCCccceeeccC----chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSHCG----WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItHGG----~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.++.+.++..+ ..++..++ ++|.... .+++.||+++|+|+|+.+... ....+.+ .+.|+.+..
T Consensus 246 ~~v~~~g~~~~~~~~~~~ad--i~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~-~~~g~~~~~----- 313 (359)
T cd03808 246 GRVEFLGFRDDVPELLAAAD--VFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVID-GVNGFLVPP----- 313 (359)
T ss_pred ceEEEeeccccHHHHHHhcc--EEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhc-CcceEEECC-----
Confidence 46777776544 56788888 5664432 578999999999999976543 3445555 677877765
Q ss_pred CCHHHHHHHHHHHhcCC
Q 042249 203 VGREEVATYARGLIQGE 219 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~ 219 (264)
-+.+++.++|.+++.++
T Consensus 314 ~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 314 GDAEALADAIERLIEDP 330 (359)
T ss_pred CCHHHHHHHHHHHHhCH
Confidence 36899999999999876
No 65
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.79 E-value=0.00051 Score=64.00 Aligned_cols=84 Identities=12% Similarity=0.172 Sum_probs=59.6
Q ss_pred CCCeEecccCCchh---ccCCCCccceeeccC----chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC
Q 042249 127 GVGLVVPSWAPQIQ---VLSHGSTGGFLSHCG----WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE 199 (264)
Q Consensus 127 ~~nv~i~~~vpq~~---lL~~~~~~~~ItHGG----~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 199 (264)
..++.+.+|+++.+ ++..++..+||...- ..+++||+++|+|+|+....+ ....+.+ .+.|+.+...
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~-~~~G~l~~~~- 361 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDN-GGNGLLLSKD- 361 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcC-CCcEEEeCCC-
Confidence 34688899998754 444333226665442 468999999999999865433 3445555 5588887654
Q ss_pred CCCCCHHHHHHHHHHHhcCC
Q 042249 200 DGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 200 ~~~~~~~~l~~ai~~ll~~~ 219 (264)
-+.+++.++|.++++|+
T Consensus 362 ---~~~~~la~~I~~ll~~~ 378 (407)
T cd04946 362 ---PTPNELVSSLSKFIDNE 378 (407)
T ss_pred ---CCHHHHHHHHHHHHhCH
Confidence 37899999999999876
No 66
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.73 E-value=0.0035 Score=56.54 Aligned_cols=92 Identities=20% Similarity=0.159 Sum_probs=62.8
Q ss_pred CCeEecccCCc-hhccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.++.+.++.++ ..++..++ ++|.- |...++.||+++|+|+|+.... ..+..+.+ -..|..+..
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d--~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~-~~~G~~~~~----- 320 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIAD--LFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKH-GETGFLVDV----- 320 (371)
T ss_pred ceEEEecCcccHHHHHHhcC--EEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcC-CCceEEcCC-----
Confidence 36777777765 56788888 55522 3346999999999999996553 34455555 567776655
Q ss_pred CCHHHHHHHHHHHhcCCc-hHHHHHHHHHH
Q 042249 203 VGREEVATYARGLIQGED-GKLLRDKMRVL 231 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~~-~~~~r~~a~~l 231 (264)
-+.+++.+++.+++.+++ .+.+++++++.
T Consensus 321 ~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 321 GDVEAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 368999999999998763 23445554443
No 67
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.72 E-value=0.0094 Score=54.97 Aligned_cols=81 Identities=6% Similarity=0.057 Sum_probs=58.4
Q ss_pred CCeEecccCCc---hhccCCCCccceeec----cCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC
Q 042249 128 VGLVVPSWAPQ---IQVLSHGSTGGFLSH----CGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE 199 (264)
Q Consensus 128 ~nv~i~~~vpq---~~lL~~~~~~~~ItH----GG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 199 (264)
.++.+.+++|+ ..++..++ +||.. .|. .++.||+++|+|+|+....+ +...+.+ -..|..+...
T Consensus 257 ~~v~~~G~~~~~~l~~~~~~aD--v~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~-~~~G~~l~~~- 328 (380)
T PRK15484 257 DRCIMLGGQPPEKMHNYYPLAD--LVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLE-GITGYHLAEP- 328 (380)
T ss_pred CcEEEeCCCCHHHHHHHHHhCC--EEEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhccc-CCceEEEeCC-
Confidence 46778888875 45688888 55542 333 57899999999999987532 3344555 5677755432
Q ss_pred CCCCCHHHHHHHHHHHhcCC
Q 042249 200 DGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 200 ~~~~~~~~l~~ai~~ll~~~ 219 (264)
.+.+++.++|.+++.|+
T Consensus 329 ---~d~~~la~~I~~ll~d~ 345 (380)
T PRK15484 329 ---MTSDSIISDINRTLADP 345 (380)
T ss_pred ---CCHHHHHHHHHHHHcCH
Confidence 47899999999999886
No 68
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.71 E-value=0.00074 Score=60.26 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=59.0
Q ss_pred CCCeEecccCCc---hhccCCCCccceee--c--------cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCcee
Q 042249 127 GVGLVVPSWAPQ---IQVLSHGSTGGFLS--H--------CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAW 193 (264)
Q Consensus 127 ~~nv~i~~~vpq---~~lL~~~~~~~~It--H--------GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 193 (264)
..|+.+.+++|+ ..++..++ ++|. . |..+++.||+++|+|+|+.+... ....+.+ ...|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~ad--i~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~-~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAAD--LFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVED-GETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCC--EEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhC-CCceE
Confidence 357889999975 45777888 4444 2 33579999999999999976532 2234444 45787
Q ss_pred EeeccCCCCCCHHHHHHHHHHHhcCC
Q 042249 194 RVKVNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 194 ~l~~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
.+.. -+.+++.++|.+++.++
T Consensus 308 ~~~~-----~~~~~l~~~i~~~~~~~ 328 (355)
T cd03799 308 LVPP-----GDPEALADAIERLLDDP 328 (355)
T ss_pred EeCC-----CCHHHHHHHHHHHHhCH
Confidence 7765 36899999999999876
No 69
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.69 E-value=0.00036 Score=63.43 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=66.8
Q ss_pred CCeEecccCCc-hhccCCCCccceeec--cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSH--CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItH--GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
.++.+.++.++ ..++..+++-++.++ |...++.||+++|+|+|+.....- ....+.+ -..|..+.. -+
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g---~~~~v~~-~~~G~lv~~-----~d 331 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG---PSEIIED-GENGYLVPK-----GD 331 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCC---cHHHccc-CCCceEeCC-----Cc
Confidence 35777777655 567888885444454 235689999999999999754311 2334455 567887765 36
Q ss_pred HHHHHHHHHHHhcCCc-hHHHHHHHHHHHHH
Q 042249 205 REEVATYARGLIQGED-GKLLRDKMRVLKDA 234 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~-~~~~r~~a~~l~~~ 234 (264)
.+++.++|..++.+++ ...+.+++.+.++.
T Consensus 332 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 362 (372)
T cd04949 332 IEALAEAIIELLNDPKLLQKFSEAAYENAER 362 (372)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 8999999999999863 44566666555443
No 70
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.69 E-value=0.00054 Score=53.67 Aligned_cols=66 Identities=20% Similarity=0.209 Sum_probs=49.3
Q ss_pred eEecccC--Cc-hhccCCCCccceeeccCchhHHHHHHhCcceeecCCC--------chHHHHHHHHHhhcCceeEeecc
Q 042249 130 LVVPSWA--PQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLY--------AEQKMNAVLLTDDLKVAWRVKVN 198 (264)
Q Consensus 130 v~i~~~v--pq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~--------~DQ~~na~~v~~~~G~G~~l~~~ 198 (264)
+++.+|. +- ..+...++ ++|+|+|.||++.++..++|.|++|-. ..|..-|..+++ .+.=+...+.
T Consensus 48 l~v~~F~~~~kiQsli~dar--IVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~spt 124 (161)
T COG5017 48 LRVYGFDKEEKIQSLIHDAR--IVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACSPT 124 (161)
T ss_pred cEEEeechHHHHHHHhhcce--EEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEcCC
Confidence 3444443 33 44555666 999999999999999999999999963 357788888888 7766666543
No 71
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.66 E-value=0.00035 Score=63.91 Aligned_cols=86 Identities=14% Similarity=0.106 Sum_probs=63.4
Q ss_pred chhccCCCCccceeeccCchhHHHHHHhCcceeecCC--CchHHHHHHHHH---hhcCceeEee-------------ccC
Q 042249 138 QIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPL--YAEQKMNAVLLT---DDLKVAWRVK-------------VNE 199 (264)
Q Consensus 138 q~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~--~~DQ~~na~~v~---~~~G~G~~l~-------------~~~ 199 (264)
...++..++ ++|+-.|..|+ |+..+|+|||+ |+ ..-|+.||+++. . .|+.-.+- .++
T Consensus 229 ~~~~m~~aD--lal~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~-igL~Nii~~~~~~~~vvPEllQ~~ 303 (347)
T PRK14089 229 THKALLEAE--FAFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKH-IGLANIFFDFLGKEPLHPELLQEF 303 (347)
T ss_pred HHHHHHhhh--HHHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCe-eehHHHhcCCCcccccCchhhccc
Confidence 356888899 99999999999 99999999999 55 346789999999 4 56554442 233
Q ss_pred CCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 042249 200 DGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAA 235 (264)
Q Consensus 200 ~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~ 235 (264)
+|++.|.+++.+. . .+.+++...++.+.+
T Consensus 304 ---~t~~~la~~i~~~-~---~~~~~~~~~~l~~~l 332 (347)
T PRK14089 304 ---VTVENLLKAYKEM-D---REKFFKKSKELREYL 332 (347)
T ss_pred ---CCHHHHHHHHHHH-H---HHHHHHHHHHHHHHh
Confidence 8899999999872 1 135666655555554
No 72
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.65 E-value=0.00078 Score=61.36 Aligned_cols=79 Identities=18% Similarity=0.135 Sum_probs=55.7
Q ss_pred CeEecccCCc-hhccCCCCcccee--ec--cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCC
Q 042249 129 GLVVPSWAPQ-IQVLSHGSTGGFL--SH--CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLV 203 (264)
Q Consensus 129 nv~i~~~vpq-~~lL~~~~~~~~I--tH--GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 203 (264)
++.+.++..+ ..++..++ ++| ++ |-..++.||+++|+|+|+....+ +...+.+ -..|..+...
T Consensus 256 ~v~~~g~~~~~~~~~~~ad--i~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~-~~~g~~~~~~----- 323 (374)
T TIGR03088 256 LVWLPGERDDVPALMQALD--LFVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQH-GVTGALVPPG----- 323 (374)
T ss_pred eEEEcCCcCCHHHHHHhcC--EEEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcC-CCceEEeCCC-----
Confidence 4555555433 56788888 555 33 33579999999999999977533 3444445 5567777653
Q ss_pred CHHHHHHHHHHHhcCC
Q 042249 204 GREEVATYARGLIQGE 219 (264)
Q Consensus 204 ~~~~l~~ai~~ll~~~ 219 (264)
+.+++.++|.+++.++
T Consensus 324 d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 324 DAVALARALQPYVSDP 339 (374)
T ss_pred CHHHHHHHHHHHHhCH
Confidence 6899999999999875
No 73
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.64 E-value=0.0011 Score=60.34 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=56.7
Q ss_pred CCeEecccCCc-----hhccCCCCccceee--c--cCchhHHHHHHhCcceeecC-CCchHHHHHHHHHhhcCceeEeec
Q 042249 128 VGLVVPSWAPQ-----IQVLSHGSTGGFLS--H--CGWNSVLESIVHGVPIIAWP-LYAEQKMNAVLLTDDLKVAWRVKV 197 (264)
Q Consensus 128 ~nv~i~~~vpq-----~~lL~~~~~~~~It--H--GG~~si~eal~~GvP~l~~P-~~~DQ~~na~~v~~~~G~G~~l~~ 197 (264)
.++.+.+|+++ ...+..++ ++|. + |-..++.||+++|+|+|+.. ..+ ....+.+ -..|..+..
T Consensus 236 ~~v~f~G~~~~~~~~~~~~~~~~d--~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~-~~~G~lv~~ 308 (359)
T PRK09922 236 QRIIWHGWQSQPWEVVQQKIKNVS--ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKP-GLNGELYTP 308 (359)
T ss_pred CeEEEecccCCcHHHHHHHHhcCc--EEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccC-CCceEEECC
Confidence 47888888754 23345567 4553 3 22579999999999999976 332 1134444 567887755
Q ss_pred cCCCCCCHHHHHHHHHHHhcCCc
Q 042249 198 NEDGLVGREEVATYARGLIQGED 220 (264)
Q Consensus 198 ~~~~~~~~~~l~~ai~~ll~~~~ 220 (264)
-+.+++.++|.+++++++
T Consensus 309 -----~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 309 -----GNIDEFVGKLNKVISGEV 326 (359)
T ss_pred -----CCHHHHHHHHHHHHhCcc
Confidence 478999999999999874
No 74
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.62 E-value=0.00056 Score=64.61 Aligned_cols=141 Identities=20% Similarity=0.258 Sum_probs=77.2
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhh-hcCCCCeE
Q 042249 53 NGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLD-RTKGVGLV 131 (264)
Q Consensus 53 ~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~nv~ 131 (264)
+..++|.||.+.....++.+..-++-|++.+...+|....+.... ..+-..+.+ .++..++.
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~-----------------~~l~~~~~~~Gv~~~Ri~ 345 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGE-----------------ARLRRRFAAHGVDPDRII 345 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHH-----------------HHHHHHHHHTTS-GGGEE
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHH-----------------HHHHHHHHHcCCChhhEE
Confidence 456999999999988998888888889999999999987643210 001111111 12234677
Q ss_pred ecccCCchh---ccCCCCcccee---eccCchhHHHHHHhCcceeecCCCc-hHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 132 VPSWAPQIQ---VLSHGSTGGFL---SHCGWNSVLESIVHGVPIIAWPLYA-EQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 132 i~~~vpq~~---lL~~~~~~~~I---tHGG~~si~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
+.++.|+.+ .+..++ +++ ..+|.+|.+|||+.|||+|++|-.. =...-+..+.. +|+.-.+-. +
T Consensus 346 f~~~~~~~ehl~~~~~~D--I~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElIA~------s 416 (468)
T PF13844_consen 346 FSPVAPREEHLRRYQLAD--ICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELIAD------S 416 (468)
T ss_dssp EEE---HHHHHHHGGG-S--EEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB-S------S
T ss_pred EcCCCCHHHHHHHhhhCC--EEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhcCC------C
Confidence 777766543 344566 444 4578899999999999999999533 23445556677 888765543 4
Q ss_pred HHHHHHHHHHHhcCC
Q 042249 205 REEVATYARGLIQGE 219 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~ 219 (264)
.++-.+.--++-.|+
T Consensus 417 ~~eYv~~Av~La~D~ 431 (468)
T PF13844_consen 417 EEEYVEIAVRLATDP 431 (468)
T ss_dssp HHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHhCCH
Confidence 455444444455554
No 75
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.60 E-value=0.0074 Score=55.87 Aligned_cols=201 Identities=12% Similarity=0.039 Sum_probs=113.7
Q ss_pred CCCCCeEeecccccCCCCCCCChhhHHHhhccCCC-CcEEEEEecCCCCCCHHHHHHHHHHHHhcC--CeEEEEEeCCCc
Q 042249 19 FRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPN-GSVLFVCFGSGGSLSQKQLNELALGLEMSG--QRFLWVVKCPDE 95 (264)
Q Consensus 19 ~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~-~~vVyvs~GS~~~~~~~~~~~l~~al~~~~--~~viw~~~~~~~ 95 (264)
++-+++.-.|-+=.+-.....++.+...|-..-+. + -+.|..+|+. -..+.+.++..++.+.. ...||+=+.++.
T Consensus 195 LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r-~v~iaaSTH~-GEeei~l~~~~~l~~~~~~~llIlVPRHpER 272 (419)
T COG1519 195 LGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHR-PVWVAASTHE-GEEEIILDAHQALKKQFPNLLLILVPRHPER 272 (419)
T ss_pred cCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCC-ceEEEecCCC-chHHHHHHHHHHHHhhCCCceEEEecCChhh
Confidence 46677888888866544332334344444443222 3 3667677753 23445556666666553 456776555432
Q ss_pred ccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCc-hhccCCCCccc-----eeeccCchhHHHHHHhCcce
Q 042249 96 KATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQ-IQVLSHGSTGG-----FLSHCGWNSVLESIVHGVPI 169 (264)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq-~~lL~~~~~~~-----~ItHGG~~si~eal~~GvP~ 169 (264)
-..-..++...+-. ....+.. ......-+|++.+-+-- ..++.-+++ + |+-+||.| ..|++++|+|+
T Consensus 273 f~~v~~l~~~~gl~-~~~rS~~----~~~~~~tdV~l~DtmGEL~l~y~~adi-AFVGGSlv~~GGHN-~LEpa~~~~pv 345 (419)
T COG1519 273 FKAVENLLKRKGLS-VTRRSQG----DPPFSDTDVLLGDTMGELGLLYGIADI-AFVGGSLVPIGGHN-PLEPAAFGTPV 345 (419)
T ss_pred HHHHHHHHHHcCCe-EEeecCC----CCCCCCCcEEEEecHhHHHHHHhhccE-EEECCcccCCCCCC-hhhHHHcCCCE
Confidence 10000000000000 0000000 00001124555554433 333343443 3 45688886 67999999999
Q ss_pred eecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHH
Q 042249 170 IAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGED-GKLLRDKMRVLKDAAA 236 (264)
Q Consensus 170 l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~r~~a~~l~~~~~ 236 (264)
|.=|+...|..-++++.+ .|+|+.++. .+.+.+++..++.|++ .+.|.+++.++-...+
T Consensus 346 i~Gp~~~Nf~ei~~~l~~-~ga~~~v~~-------~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~ 405 (419)
T COG1519 346 IFGPYTFNFSDIAERLLQ-AGAGLQVED-------ADLLAKAVELLLADEDKREAYGRAGLEFLAQNR 405 (419)
T ss_pred EeCCccccHHHHHHHHHh-cCCeEEECC-------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999 999999863 5889999999988753 3345555544444433
No 76
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.59 E-value=0.002 Score=57.40 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=56.6
Q ss_pred CCeEecc-cCCc---hhccCCCCcccee--ec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeec
Q 042249 128 VGLVVPS-WAPQ---IQVLSHGSTGGFL--SH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKV 197 (264)
Q Consensus 128 ~nv~i~~-~vpq---~~lL~~~~~~~~I--tH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~ 197 (264)
.++.+.+ |+|+ ..++..++ ++| ++ |-.+++.||+++|+|+|+.+..+ ...+.. .+.|..+..
T Consensus 247 ~~v~~~~~~~~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~~~ 318 (366)
T cd03822 247 DRVIFINRYLPDEELPELFSAAD--VVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLVPP 318 (366)
T ss_pred CcEEEecCcCCHHHHHHHHhhcC--EEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEEcC
Confidence 4676664 4775 46778888 444 22 33568999999999999987654 233445 567777665
Q ss_pred cCCCCCCHHHHHHHHHHHhcCC
Q 042249 198 NEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 198 ~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
. +.+++.+++.++++++
T Consensus 319 ~-----d~~~~~~~l~~l~~~~ 335 (366)
T cd03822 319 G-----DPAALAEAIRRLLADP 335 (366)
T ss_pred C-----CHHHHHHHHHHHHcCh
Confidence 3 5899999999999875
No 77
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.52 E-value=0.002 Score=59.80 Aligned_cols=116 Identities=11% Similarity=0.051 Sum_probs=73.9
Q ss_pred CCeEecccCCch---hccCCCCccceeeccCc------hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLSHCGW------NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN 198 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~ItHGG~------~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 198 (264)
.|+.+.+|+|+. .++..+++.++.+..+. +.+.|++++|+|+|+....+... ...+ . +.|+.+...
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~--~~~i-~--~~G~~~~~~ 358 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTEL--GQLV-E--GIGVCVEPE 358 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchH--HHHH-h--CCcEEeCCC
Confidence 378888998864 47888886555555332 34789999999999987543211 1122 2 567777653
Q ss_pred CCCCCCHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 042249 199 EDGLVGREEVATYARGLIQGED-GKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLE 260 (264)
Q Consensus 199 ~~~~~~~~~l~~ai~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 260 (264)
+.+++.++|.+++++++ .+.+++++++..+ +.-+......++++.++++.
T Consensus 359 -----d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 359 -----SVEALVAAIAALARQALLRPKLGTVAREYAE-------RTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred -----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHHHh
Confidence 68999999999998762 3344555444332 23344556666666666553
No 78
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.51 E-value=0.0031 Score=55.15 Aligned_cols=80 Identities=18% Similarity=0.106 Sum_probs=54.9
Q ss_pred CCeEecccCCc-hhccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.++.+.+|.+. ..++..++ ++|.- |..+++.||+++|+|+|+.... .....+.+ .+.|+.....
T Consensus 246 ~~v~~~g~~~~~~~~~~~~d--~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~-~~~g~~~~~~---- 314 (353)
T cd03811 246 DRVHFLGFQSNPYPYLKAAD--LFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILED-GENGLLVPVG---- 314 (353)
T ss_pred ccEEEecccCCHHHHHHhCC--EEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcC-CCceEEECCC----
Confidence 46777777765 56788888 55532 3357899999999999996554 44455666 7788887664
Q ss_pred CCHHHH---HHHHHHHhcCC
Q 042249 203 VGREEV---ATYARGLIQGE 219 (264)
Q Consensus 203 ~~~~~l---~~ai~~ll~~~ 219 (264)
+.+.+ .+.+..++.++
T Consensus 315 -~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 315 -DEAALAAAALALLDLLLDP 333 (353)
T ss_pred -CHHHHHHHHHHHHhccCCh
Confidence 46676 55555666554
No 79
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.50 E-value=0.0027 Score=55.96 Aligned_cols=77 Identities=21% Similarity=0.218 Sum_probs=53.0
Q ss_pred CeEecccCCc-hhccCCCCccceeeccC----chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCC
Q 042249 129 GLVVPSWAPQ-IQVLSHGSTGGFLSHCG----WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLV 203 (264)
Q Consensus 129 nv~i~~~vpq-~~lL~~~~~~~~ItHGG----~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 203 (264)
++.+.++... ..++..++ ++|.... .+++.||+++|+|+|+....+ +...+.+ .|..+.. -
T Consensus 252 ~v~~~g~~~~~~~~~~~ad--i~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~----~~e~~~~---~g~~~~~-----~ 317 (365)
T cd03807 252 KVILLGERSDVPALLNALD--VFVLSSLSEGFPNVLLEAMACGLPVVATDVGD----NAELVGD---TGFLVPP-----G 317 (365)
T ss_pred eEEEccccccHHHHHHhCC--EEEeCCccccCCcHHHHHHhcCCCEEEcCCCC----hHHHhhc---CCEEeCC-----C
Confidence 5655554433 56788888 6665443 479999999999999965432 3333333 4555544 3
Q ss_pred CHHHHHHHHHHHhcCC
Q 042249 204 GREEVATYARGLIQGE 219 (264)
Q Consensus 204 ~~~~l~~ai~~ll~~~ 219 (264)
+.+++.++|.++++++
T Consensus 318 ~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 318 DPEALAEAIEALLADP 333 (365)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 6899999999999875
No 80
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.45 E-value=0.0013 Score=63.19 Aligned_cols=154 Identities=18% Similarity=0.232 Sum_probs=93.9
Q ss_pred CCCCCeEeecccccCCCCCCC-Chh-hHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcc
Q 042249 19 FRLPPVYPVGPLILTGSINES-DRT-DCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEK 96 (264)
Q Consensus 19 ~~~p~~~~vGpl~~~~~~~~~-~~~-~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~ 96 (264)
..+|+.+|||---.....-.+ ... ...++ .-++..+||++|-.....++..+..-+.-|+..+..++|..+.+..
T Consensus 723 v~lPh~ffi~d~~qk~~~~~dpn~kP~r~~y--~Lp~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~- 799 (966)
T KOG4626|consen 723 VYLPHCFFIGDHKQKNQDVLDPNNKPTRSQY--GLPEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV- 799 (966)
T ss_pred hhCCceEEecCcccccccccCCCCCCCCCCC--CCCCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEecccc-
Confidence 378899999976553211000 000 00001 1234569999999998899999988888899999999999987643
Q ss_pred cccccccccCCCCCCCCCCCCChhhhhh-----cCCCCeEecccCCc-----hhccCCCCccceeeccCchhHHHHHHhC
Q 042249 97 ATNATYFGVHGMKEENPFDYLPKGFLDR-----TKGVGLVVPSWAPQ-----IQVLSHGSTGGFLSHCGWNSVLESIVHG 166 (264)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~-----~~~~nv~i~~~vpq-----~~lL~~~~~~~~ItHGG~~si~eal~~G 166 (264)
|+ ..|... ..+..+.+..-++- ...|..-...-+++. |..|.++.++.|
T Consensus 800 --------ge------------~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~G 858 (966)
T KOG4626|consen 800 --------GE------------QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAG 858 (966)
T ss_pred --------ch------------HHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhcccCcCcC-CcccchhhhccC
Confidence 11 111111 11223443332221 222222222235565 588999999999
Q ss_pred cceeecCCCchH-HHHHHHHHhhcCceeEeec
Q 042249 167 VPIIAWPLYAEQ-KMNAVLLTDDLKVAWRVKV 197 (264)
Q Consensus 167 vP~l~~P~~~DQ-~~na~~v~~~~G~G~~l~~ 197 (264)
||||.+|.-.-- ..-+..+.. .|+|..+-+
T Consensus 859 vPmVTmpge~lAsrVa~Sll~~-~Gl~hliak 889 (966)
T KOG4626|consen 859 VPMVTMPGETLASRVAASLLTA-LGLGHLIAK 889 (966)
T ss_pred CceeecccHHHHHHHHHHHHHH-cccHHHHhh
Confidence 999999985433 344456677 899986654
No 81
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.45 E-value=0.0017 Score=58.09 Aligned_cols=77 Identities=12% Similarity=0.034 Sum_probs=52.4
Q ss_pred CCeEecccCCc-hhccCCCCccceeecc----CchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSHC----GWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItHG----G~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.++.+.++..+ ..++..++ ++|.-. ..+++.||+++|+|+|+... ..+...+.+ .| ..+..
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad--~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~g--~~~~~----- 310 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAAD--LFVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGD-SG--LIVPI----- 310 (360)
T ss_pred CcEEEecccccHHHHHHhhc--eEEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecC-Cc--eEeCC-----
Confidence 46777777654 56788888 454432 25789999999999998543 334444444 34 34433
Q ss_pred CCHHHHHHHHHHHhcC
Q 042249 203 VGREEVATYARGLIQG 218 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~ 218 (264)
-+.+++.+++.+++.+
T Consensus 311 ~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 311 SDPEALANKIDEILKM 326 (360)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 3689999999999853
No 82
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.42 E-value=0.0046 Score=54.73 Aligned_cols=81 Identities=15% Similarity=0.085 Sum_probs=55.1
Q ss_pred CCCeEecccCCc---hhccCCCCccceeec--cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCC
Q 042249 127 GVGLVVPSWAPQ---IQVLSHGSTGGFLSH--CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDG 201 (264)
Q Consensus 127 ~~nv~i~~~vpq---~~lL~~~~~~~~ItH--GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 201 (264)
..++.+.+|+++ ..++..+++-++-++ |-..++.||+++|+|+|+.+..+ .... .. .+.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~-~~-~~~~~~~~~---- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQEL-IE-YGCGWVVDD---- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHH-hh-cCceEEeCC----
Confidence 357889999985 345788884222232 22468999999999999976533 2222 22 256665543
Q ss_pred CCCHHHHHHHHHHHhcCC
Q 042249 202 LVGREEVATYARGLIQGE 219 (264)
Q Consensus 202 ~~~~~~l~~ai~~ll~~~ 219 (264)
+.+++.++|.+++.++
T Consensus 331 --~~~~~~~~i~~l~~~~ 346 (375)
T cd03821 331 --DVDALAAALRRALELP 346 (375)
T ss_pred --ChHHHHHHHHHHHhCH
Confidence 3499999999999875
No 83
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.38 E-value=0.0056 Score=56.37 Aligned_cols=91 Identities=12% Similarity=-0.003 Sum_probs=63.2
Q ss_pred CCeEecccCCch---hccCCCCccceee---ccC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLS---HCG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~It---HGG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
.++.+.+++|.. .++..++ +||. +.| ..++.||+++|+|+|+....+ ....+.+ -+.|+.+..
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad--~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~-~~~g~~~~~--- 352 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAAD--VVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVAD-GETGLLVDG--- 352 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCC--EEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhcc-CCceEECCC---
Confidence 478888998764 5788888 5553 223 358999999999999976533 3334555 567877765
Q ss_pred CCCCHHHHHHHHHHHhcCCc-hHHHHHHHHH
Q 042249 201 GLVGREEVATYARGLIQGED-GKLLRDKMRV 230 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~~-~~~~r~~a~~ 230 (264)
-+.+++.++|.+++++++ .+.+++++++
T Consensus 353 --~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 353 --HDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 368999999999998752 2334444443
No 84
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.35 E-value=0.0056 Score=55.79 Aligned_cols=84 Identities=19% Similarity=0.186 Sum_probs=55.8
Q ss_pred CeEe-cccCCc---hhccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccC-
Q 042249 129 GLVV-PSWAPQ---IQVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE- 199 (264)
Q Consensus 129 nv~i-~~~vpq---~~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~- 199 (264)
++.+ .++++. ..++..++ +||.- +-..++.||+++|+|+|+.... .....+.+ -+.|..+...+
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~aD--v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~-~~~G~~~~~~~~ 333 (388)
T TIGR02149 261 GIIWINKMLPKEELVELLSNAE--VFVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVD-GETGFLVPPDNS 333 (388)
T ss_pred ceEEecCCCCHHHHHHHHHhCC--EEEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhC-CCceEEcCCCCC
Confidence 3543 356664 45688888 66642 2245789999999999997653 24455555 66788887643
Q ss_pred CCCCCHHHHHHHHHHHhcCC
Q 042249 200 DGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 200 ~~~~~~~~l~~ai~~ll~~~ 219 (264)
+..-..+.+.++|.++++++
T Consensus 334 ~~~~~~~~l~~~i~~l~~~~ 353 (388)
T TIGR02149 334 DADGFQAELAKAINILLADP 353 (388)
T ss_pred cccchHHHHHHHHHHHHhCH
Confidence 00011289999999999876
No 85
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.32 E-value=0.0023 Score=59.78 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=60.9
Q ss_pred CeEec-ccCCc---hhccCCCCccceee-c------cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeec
Q 042249 129 GLVVP-SWAPQ---IQVLSHGSTGGFLS-H------CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKV 197 (264)
Q Consensus 129 nv~i~-~~vpq---~~lL~~~~~~~~It-H------GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~ 197 (264)
++++. +|+|. ..+|..++ +++. + |--++++||+++|+|+|+.... .....+.+ -+.|+.+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aD--v~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~-~~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASAD--LGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKH-GENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCC--EEEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcC-CCCEEEEC-
Confidence 55543 57775 44678888 5553 1 1245799999999999996542 34455556 67888772
Q ss_pred cCCCCCCHHHHHHHHHHHhcC---Cc-hHHHHHHHHHHH
Q 042249 198 NEDGLVGREEVATYARGLIQG---ED-GKLLRDKMRVLK 232 (264)
Q Consensus 198 ~~~~~~~~~~l~~ai~~ll~~---~~-~~~~r~~a~~l~ 232 (264)
+.+++.++|..+++| ++ .+.|++++++.+
T Consensus 367 ------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 ------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 479999999999998 43 445555555544
No 86
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.27 E-value=0.0061 Score=56.29 Aligned_cols=90 Identities=21% Similarity=0.163 Sum_probs=61.3
Q ss_pred CCCeEecccCCc-hhccCCCCcccee--ec--cCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 127 GVGLVVPSWAPQ-IQVLSHGSTGGFL--SH--CGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 127 ~~nv~i~~~vpq-~~lL~~~~~~~~I--tH--GG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
..++.+.+++++ ..++..++ +|| ++ .|. +.+.||+++|+|+|+.+...+.. ... .|.|+.+. .
T Consensus 279 ~~~V~~~G~v~~~~~~~~~ad--v~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~-~~~g~lv~-~-- 347 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAA--VAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DAL-PGAELLVA-A-- 347 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCC--EEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----ccc-CCcceEeC-C--
Confidence 457888899886 56788888 554 33 354 46999999999999988643221 123 46677664 2
Q ss_pred CCCCHHHHHHHHHHHhcCCc-hHHHHHHHHH
Q 042249 201 GLVGREEVATYARGLIQGED-GKLLRDKMRV 230 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~~-~~~~r~~a~~ 230 (264)
+.+++.++|.++++|++ .+.+.+++++
T Consensus 348 ---~~~~la~ai~~ll~~~~~~~~~~~~ar~ 375 (397)
T TIGR03087 348 ---DPADFAAAILALLANPAEREELGQAARR 375 (397)
T ss_pred ---CHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 68999999999998763 2334444443
No 87
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.26 E-value=0.013 Score=52.41 Aligned_cols=95 Identities=12% Similarity=-0.021 Sum_probs=61.0
Q ss_pred CCeEecccCCc-hhccCCCCccceeec--cC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSH--CG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLV 203 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItH--GG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 203 (264)
.++.+.+|.+. ..++..+++.++-++ -| .+++.||+++|+|+|+....+ ....+.+ -+.|+.+.. -
T Consensus 246 ~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~-~~~g~~~~~-----~ 315 (355)
T cd03819 246 DRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRP-GETGLLVPP-----G 315 (355)
T ss_pred ceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhC-CCceEEeCC-----C
Confidence 46888888543 567888884333331 23 369999999999999875432 3444555 557888765 3
Q ss_pred CHHHHHHHHHHHhc-CCc-hHHHHHHHHHHH
Q 042249 204 GREEVATYARGLIQ-GED-GKLLRDKMRVLK 232 (264)
Q Consensus 204 ~~~~l~~ai~~ll~-~~~-~~~~r~~a~~l~ 232 (264)
+.+++.++|..++. +++ ..++++++++..
T Consensus 316 ~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~ 346 (355)
T cd03819 316 DAEALAQALDQILSLLPEGRAKMFAKARMCV 346 (355)
T ss_pred CHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 68999999976654 432 334444444443
No 88
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.23 E-value=0.018 Score=51.13 Aligned_cols=81 Identities=19% Similarity=0.143 Sum_probs=53.6
Q ss_pred CCCeEecccCCch---hccCCCCccceeec--cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCC
Q 042249 127 GVGLVVPSWAPQI---QVLSHGSTGGFLSH--CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDG 201 (264)
Q Consensus 127 ~~nv~i~~~vpq~---~lL~~~~~~~~ItH--GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 201 (264)
..++.+.+|+|+. .++..+++-++-+. |..+++.||+++|+|+|+....+ ....+.+ .|..+..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~---~~~~~~~---- 320 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAGD---AALYFDP---- 320 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceecC---ceeeeCC----
Confidence 4578889999775 56778884222221 23468999999999999965422 1111222 2444443
Q ss_pred CCCHHHHHHHHHHHhcCC
Q 042249 202 LVGREEVATYARGLIQGE 219 (264)
Q Consensus 202 ~~~~~~l~~ai~~ll~~~ 219 (264)
-+.+++.++|.+++.++
T Consensus 321 -~~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 321 -LDPEALAAAIERLLEDP 337 (365)
T ss_pred -CCHHHHHHHHHHHhcCH
Confidence 36899999999999876
No 89
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.15 E-value=0.0089 Score=54.54 Aligned_cols=90 Identities=18% Similarity=0.089 Sum_probs=62.0
Q ss_pred CCeEecccCCch---hccCCCCccceeec---cC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLSH---CG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~ItH---GG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
.++.+.+++|.. .++..++ +++.. -| ..++.||+++|+|+|+.-..+ ....+.+ .+.|..+.
T Consensus 280 ~~V~f~g~~~~~~~~~~l~~ad--~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~-~~~g~~~~---- 348 (392)
T cd03805 280 DQVIFLPSISDSQKELLLSSAR--ALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVD-GETGFLCE---- 348 (392)
T ss_pred ceEEEeCCCChHHHHHHHhhCe--EEEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhcc-CCceEEeC----
Confidence 578899999875 5678888 55532 11 357899999999999975433 2334555 56777664
Q ss_pred CCCCHHHHHHHHHHHhcCCc-hHHHHHHHHH
Q 042249 201 GLVGREEVATYARGLIQGED-GKLLRDKMRV 230 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~~-~~~~r~~a~~ 230 (264)
.+.+++.++|.+++++++ .+.+.+++++
T Consensus 349 --~~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 349 --PTPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred --CCHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 357999999999998763 3344444444
No 90
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.13 E-value=0.0012 Score=51.10 Aligned_cols=80 Identities=20% Similarity=0.207 Sum_probs=49.2
Q ss_pred CCCeEecccCCc-hhccCCCCccceeec--cC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 127 GVGLVVPSWAPQ-IQVLSHGSTGGFLSH--CG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 127 ~~nv~i~~~vpq-~~lL~~~~~~~~ItH--GG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.+|+.+.+|++. ..++..+++.+..+. .| .+++.|++++|+|+|+.+. .....+.. .+.|..+ .
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~-~~~~~~~-~----- 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEE-DGCGVLV-A----- 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE--T-----
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheee-cCCeEEE-C-----
Confidence 348999899865 567888997555442 22 4899999999999999765 12223333 5777766 3
Q ss_pred CCHHHHHHHHHHHhcC
Q 042249 203 VGREEVATYARGLIQG 218 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~ 218 (264)
-+.+++.++|+++++|
T Consensus 120 ~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 120 NDPEELAEAIERLLND 135 (135)
T ss_dssp T-HHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHhcC
Confidence 3789999999999864
No 91
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.03 E-value=0.05 Score=51.20 Aligned_cols=184 Identities=10% Similarity=0.119 Sum_probs=103.4
Q ss_pred HHHhhccCCCCcEEEEEecCCCCC------C----HHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCC
Q 042249 44 CLKWLDDQPNGSVLFVCFGSGGSL------S----QKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENP 113 (264)
Q Consensus 44 ~~~wl~~~~~~~vVyvs~GS~~~~------~----~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (264)
+..|+...+.+++|.|+.-..... . .+.+.+++..+.+.+++++++.-....+. .+. +.
T Consensus 224 ~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~------~~~-----dD 292 (426)
T PRK10017 224 VQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDS------YNK-----DD 292 (426)
T ss_pred hhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccC------CCC-----ch
Confidence 345665444567888886543211 1 13344566666666888887653211000 000 00
Q ss_pred CCCCChhhhhhcCCC-CeE-ec-ccCCc--hhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhh
Q 042249 114 FDYLPKGFLDRTKGV-GLV-VP-SWAPQ--IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDD 188 (264)
Q Consensus 114 ~~~lp~~~~~~~~~~-nv~-i~-~~vpq--~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 188 (264)
......+...+..+ +++ +. .+-|. ..++++++ ++|..= .-+..-|+..|||.+.+++ | +.....+..
T Consensus 293 -~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~d--l~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~- 364 (426)
T PRK10017 293 -RMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACE--LTVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQ- 364 (426)
T ss_pred -HHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCC--EEEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHH-
Confidence 00112233333322 222 22 23333 37888888 787543 3457778999999999998 2 445555567
Q ss_pred cCceeE-eeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 042249 189 LKVAWR-VKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWK 257 (264)
Q Consensus 189 ~G~G~~-l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 257 (264)
+|..-. ++..+ ++.++|.+.+.+++++. +.+++..++-.+++++ .......++++.+.
T Consensus 365 lg~~~~~~~~~~---l~~~~Li~~v~~~~~~r--~~~~~~l~~~v~~~r~------~~~~~~~~~~~~~~ 423 (426)
T PRK10017 365 LGLPEMAIDIRH---LLDGSLQAMVADTLGQL--PALNARLAEAVSRERQ------TGMQMVQSVLERIG 423 (426)
T ss_pred cCCccEEechhh---CCHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHH------HHHHHHHHHHHHhc
Confidence 888755 55555 88999999999999875 3555555554444442 22344556665553
No 92
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.00 E-value=0.0047 Score=56.99 Aligned_cols=94 Identities=17% Similarity=0.100 Sum_probs=63.0
Q ss_pred CCCeEecccCCchh---ccCCCCccceeec-cC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCC
Q 042249 127 GVGLVVPSWAPQIQ---VLSHGSTGGFLSH-CG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDG 201 (264)
Q Consensus 127 ~~nv~i~~~vpq~~---lL~~~~~~~~ItH-GG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 201 (264)
..++.+.+++|+.. ++..+++-++.+. .| ..++.||+++|+|+|+... ......+.+ -..|+.+..
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~-~~~G~lv~~---- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITD-GENGLLVDF---- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhccc-CCceEEcCC----
Confidence 35788999998754 6778884333333 22 2489999999999999654 234444555 456777665
Q ss_pred CCCHHHHHHHHHHHhcCCc-hHHHHHHHHH
Q 042249 202 LVGREEVATYARGLIQGED-GKLLRDKMRV 230 (264)
Q Consensus 202 ~~~~~~l~~ai~~ll~~~~-~~~~r~~a~~ 230 (264)
-+.+++.++|.+++++++ ...+.+++++
T Consensus 351 -~d~~~la~~i~~ll~~~~~~~~l~~~ar~ 379 (396)
T cd03818 351 -FDPDALAAAVIELLDDPARRARLRRAARR 379 (396)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 368999999999998762 2334444433
No 93
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.99 E-value=0.0075 Score=57.93 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=65.3
Q ss_pred CCeEecccCCchhccCCCCccceee---ccC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc--CCC
Q 042249 128 VGLVVPSWAPQIQVLSHGSTGGFLS---HCG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN--EDG 201 (264)
Q Consensus 128 ~nv~i~~~vpq~~lL~~~~~~~~It---HGG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~--~~~ 201 (264)
.++.+.++.+...++..++ +||. .-| ..+++||+++|+|+|+.....- +...+.+ -..|..+... .+.
T Consensus 376 ~~V~f~G~~~~~~~~~~ad--v~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G---~~eiI~~-g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYE--LYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYG---NPTFIED-NKNGYLIPIDEEEDD 449 (500)
T ss_pred CeEEEcCCCCHHHHHHhCC--EEEEcCccccccHHHHHHHHhCCCEEEecCCCC---CHHHccC-CCCEEEEeCCccccc
Confidence 4677888888788899888 5654 233 4689999999999999765311 2333444 4567777632 100
Q ss_pred CCC-HHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 042249 202 LVG-REEVATYARGLIQGEDGKLLRDKMRVLKDA 234 (264)
Q Consensus 202 ~~~-~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~ 234 (264)
.-+ .+++.++|.++++++....|.+++.+.++.
T Consensus 450 ~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEG 483 (500)
T ss_pred hhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHh
Confidence 012 788999999999644344556666554443
No 94
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.99 E-value=0.02 Score=52.96 Aligned_cols=205 Identities=18% Similarity=0.141 Sum_probs=109.5
Q ss_pred HHHHhhhhccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHH---HHhc--C
Q 042249 9 KALMKSRESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALG---LEMS--G 83 (264)
Q Consensus 9 ~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~a---l~~~--~ 83 (264)
++++++ +. ++.|||-=+.+............+.+ -.+++++|.+-.||-..-=...+..++++ +.+. +
T Consensus 146 ~~y~~~-----g~-~~~~VGHPl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~ 218 (373)
T PF02684_consen 146 EFYKKH-----GV-PVTYVGHPLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPD 218 (373)
T ss_pred HHHhcc-----CC-CeEEECCcchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 556664 54 69999955555433222333444444 33567899999999632111223333444 3333 3
Q ss_pred CeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhc--CCCCeEec-ccCCchhccCCCCccceeeccCchhHH
Q 042249 84 QRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRT--KGVGLVVP-SWAPQIQVLSHGSTGGFLSHCGWNSVL 160 (264)
Q Consensus 84 ~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~i~-~~vpq~~lL~~~~~~~~ItHGG~~si~ 160 (264)
..|++.+..... .+.+.... ...++.+. ..-.-.+++..++. ++++-| ..++
T Consensus 219 l~fvvp~a~~~~----------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~-al~~SG--TaTL 273 (373)
T PF02684_consen 219 LQFVVPVAPEVH----------------------EELIEEILAEYPPDVSIVIIEGESYDAMAAADA-ALAASG--TATL 273 (373)
T ss_pred eEEEEecCCHHH----------------------HHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc-hhhcCC--HHHH
Confidence 345544322111 00000000 01122221 11234567777773 444444 5778
Q ss_pred HHHHhCcceeecCCC-chHHHHHHHHHhhcC-cee-------EeeccC-CCCCCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042249 161 ESIVHGVPIIAWPLY-AEQKMNAVLLTDDLK-VAW-------RVKVNE-DGLVGREEVATYARGLIQGEDGKLLRDKMRV 230 (264)
Q Consensus 161 eal~~GvP~l~~P~~-~DQ~~na~~v~~~~G-~G~-------~l~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~ 230 (264)
|+..+|+|||++=-. .=-++-|+++.+ .. +|+ .+-++- .+.+|++.|.+++..++.|+ ..++....
T Consensus 274 E~Al~g~P~Vv~Yk~~~lt~~iak~lvk-~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~---~~~~~~~~ 349 (373)
T PF02684_consen 274 EAALLGVPMVVAYKVSPLTYFIAKRLVK-VKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP---EKRKKQKE 349 (373)
T ss_pred HHHHhCCCEEEEEcCcHHHHHHHHHhhc-CCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 999999999987432 234556677665 33 221 111100 12379999999999999986 44666666
Q ss_pred HHHHHHhhcCCCCChHHHH
Q 042249 231 LKDAAANALSPDGFSTKSL 249 (264)
Q Consensus 231 l~~~~~~a~~~gg~~~~~~ 249 (264)
..+.+++..++|.++..+.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~ 368 (373)
T PF02684_consen 350 LFREIRQLLGPGASSRAAQ 368 (373)
T ss_pred HHHHHHHhhhhccCCHHHH
Confidence 6666666666777766543
No 95
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.95 E-value=0.0073 Score=57.44 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=56.5
Q ss_pred CCeEecccCCchhccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhc-----C-ceeEeec
Q 042249 128 VGLVVPSWAPQIQVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDL-----K-VAWRVKV 197 (264)
Q Consensus 128 ~nv~i~~~vpq~~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~-----G-~G~~l~~ 197 (264)
.+|.+.+...-..++..++ ++|.. |-..++.||+++|+|+|+....+ ....+.+ . | .|+.+..
T Consensus 354 ~~V~f~G~~~v~~~l~~aD--v~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~----~~elv~~-~~~~~~g~~G~lv~~ 426 (475)
T cd03813 354 DNVKFTGFQNVKEYLPKLD--VLVLTSISEGQPLVILEAMAAGIPVVATDVGS----CRELIEG-ADDEALGPAGEVVPP 426 (475)
T ss_pred CeEEEcCCccHHHHHHhCC--EEEeCchhhcCChHHHHHHHcCCCEEECCCCC----hHHHhcC-CcccccCCceEEECC
Confidence 4787777555577888888 55433 33478999999999999964432 2233333 2 2 6777765
Q ss_pred cCCCCCCHHHHHHHHHHHhcCC
Q 042249 198 NEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 198 ~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
.+.+++.++|.+++.|+
T Consensus 427 -----~d~~~la~ai~~ll~~~ 443 (475)
T cd03813 427 -----ADPEALARAILRLLKDP 443 (475)
T ss_pred -----CCHHHHHHHHHHHhcCH
Confidence 46899999999999886
No 96
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=96.93 E-value=0.00079 Score=50.13 Aligned_cols=55 Identities=15% Similarity=0.204 Sum_probs=45.6
Q ss_pred hhhHHHhhccCCCCcEEEEEecCCCCC---CH--HHHHHHHHHHHhcCCeEEEEEeCCCc
Q 042249 41 RTDCLKWLDDQPNGSVLFVCFGSGGSL---SQ--KQLNELALGLEMSGQRFLWVVKCPDE 95 (264)
Q Consensus 41 ~~~~~~wl~~~~~~~vVyvs~GS~~~~---~~--~~~~~l~~al~~~~~~viw~~~~~~~ 95 (264)
...+.+|+...+.+|.|+||+||.... .. ..+..++++++.++..++..+.....
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~ 86 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQR 86 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHH
Confidence 356778999999999999999998543 22 47888999999999999999886554
No 97
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.93 E-value=0.01 Score=53.14 Aligned_cols=79 Identities=19% Similarity=0.039 Sum_probs=54.6
Q ss_pred CCeEecccCCc-hhccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.++.+.++..+ ..++..++ ++|.- |-..+++||+++|+|+|+....+- ...+.+ +.|..+..
T Consensus 249 ~~v~~~g~~~~~~~~~~~ad--i~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~----~~~i~~--~~~~~~~~----- 315 (358)
T cd03812 249 DKVIFLGVRNDVPELLQAMD--VFLFPSLYEGLPLVLIEAQASGLPCILSDTITK----EVDLTD--LVKFLSLD----- 315 (358)
T ss_pred CcEEEecccCCHHHHHHhcC--EEEecccccCCCHHHHHHHHhCCCEEEEcCCch----hhhhcc--CccEEeCC-----
Confidence 46777776544 56788888 44432 346799999999999999766442 222233 44544433
Q ss_pred CCHHHHHHHHHHHhcCC
Q 042249 203 VGREEVATYARGLIQGE 219 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~ 219 (264)
-+++++.++|.++++++
T Consensus 316 ~~~~~~a~~i~~l~~~~ 332 (358)
T cd03812 316 ESPEIWAEEILKLKSED 332 (358)
T ss_pred CCHHHHHHHHHHHHhCc
Confidence 35799999999999987
No 98
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.85 E-value=0.026 Score=50.50 Aligned_cols=77 Identities=22% Similarity=0.221 Sum_probs=49.3
Q ss_pred CCCeEecccCCch---hccCCCCccceeecc----C-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc
Q 042249 127 GVGLVVPSWAPQI---QVLSHGSTGGFLSHC----G-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN 198 (264)
Q Consensus 127 ~~nv~i~~~vpq~---~lL~~~~~~~~ItHG----G-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 198 (264)
..++.+.+++|+. .++..++ +++.+. | .+++.||+++|+|+|+...... ...+.. .|......
T Consensus 247 ~~~V~~~g~~~~~~~~~~~~~ad--~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~---~g~~~~~~ 317 (363)
T cd04955 247 DPRIIFVGPIYDQELLELLRYAA--LFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD---KAIYFKVG 317 (363)
T ss_pred CCcEEEccccChHHHHHHHHhCC--EEEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC---CeeEecCc
Confidence 4579999999885 4566677 444433 2 2579999999999999754321 111111 23333221
Q ss_pred CCCCCCHHHHHHHHHHHhcCC
Q 042249 199 EDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 199 ~~~~~~~~~l~~ai~~ll~~~ 219 (264)
+.+.++|.++++++
T Consensus 318 -------~~l~~~i~~l~~~~ 331 (363)
T cd04955 318 -------DDLASLLEELEADP 331 (363)
T ss_pred -------hHHHHHHHHHHhCH
Confidence 22999999999875
No 99
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.80 E-value=0.0058 Score=55.36 Aligned_cols=109 Identities=16% Similarity=0.279 Sum_probs=75.7
Q ss_pred CCeEecccCCchhc---cCCCCccceeec-------cC------chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCc
Q 042249 128 VGLVVPSWAPQIQV---LSHGSTGGFLSH-------CG------WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKV 191 (264)
Q Consensus 128 ~nv~i~~~vpq~~l---L~~~~~~~~ItH-------GG------~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 191 (264)
.|+.+.+|+|+.++ |.. +.+++... +. -+-+.+++++|+|+|+.+ +...+..+.+ .++
T Consensus 207 ~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~-~~~ 280 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVE-NGL 280 (333)
T ss_pred CCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHh-CCc
Confidence 37888899988655 333 33222211 11 123778899999999964 4566777888 999
Q ss_pred eeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 042249 192 AWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQ 254 (264)
Q Consensus 192 G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~ 254 (264)
|+.++ +.+++.+++..+. +++-..|++|++++++++++ |..-..++.+++.
T Consensus 281 G~~v~-------~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 281 GFVVD-------SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred eEEeC-------CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 99986 3478999998864 33456799999999999994 5655556655543
No 100
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=96.74 E-value=0.0099 Score=54.39 Aligned_cols=162 Identities=10% Similarity=0.081 Sum_probs=85.8
Q ss_pred CCCeEeecccccCCCCC--CCChhhH--HHhhccCCCCcEEEEEecCCCCCC-H---HHHHHHHHHHHhc-CCeEEEEEe
Q 042249 21 LPPVYPVGPLILTGSIN--ESDRTDC--LKWLDDQPNGSVLFVCFGSGGSLS-Q---KQLNELALGLEMS-GQRFLWVVK 91 (264)
Q Consensus 21 ~p~~~~vGpl~~~~~~~--~~~~~~~--~~wl~~~~~~~vVyvs~GS~~~~~-~---~~~~~l~~al~~~-~~~viw~~~ 91 (264)
..+++.||....+.-.. ....... ..++.. .+++.++|++=...... . ..+..++.++.+. +.++||.+.
T Consensus 144 ~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~h 222 (346)
T PF02350_consen 144 PERIFVVGNPGIDALLQNKEEIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLH 222 (346)
T ss_dssp GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--
T ss_pred CCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 34788999876553100 0011111 123222 56778999985544444 3 4566667777766 678898886
Q ss_pred CCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCC---chhccCCCCccceeeccCchhHH-HHHHhCc
Q 042249 92 CPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAP---QIQVLSHGSTGGFLSHCGWNSVL-ESIVHGV 167 (264)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vp---q~~lL~~~~~~~~ItHGG~~si~-eal~~Gv 167 (264)
.... +. ..+-+.+ ... +|+++..-++ ...+|.+++ ++|+-.| ++. ||.++|+
T Consensus 223 n~p~---------~~--------~~i~~~l-~~~--~~v~~~~~l~~~~~l~ll~~a~--~vvgdSs--GI~eEa~~lg~ 278 (346)
T PF02350_consen 223 NNPR---------GS--------DIIIEKL-KKY--DNVRLIEPLGYEEYLSLLKNAD--LVVGDSS--GIQEEAPSLGK 278 (346)
T ss_dssp S-HH---------HH--------HHHHHHH-TT---TTEEEE----HHHHHHHHHHES--EEEESSH--HHHHHGGGGT-
T ss_pred CCch---------HH--------HHHHHHh-ccc--CCEEEECCCCHHHHHHHHhcce--EEEEcCc--cHHHHHHHhCC
Confidence 4221 00 0011111 111 2777776554 467888899 9999998 555 9999999
Q ss_pred ceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 168 PIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 168 P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
|.|.+=...+.+.- .. .|..+.+. .+.++|.+++++++.+
T Consensus 279 P~v~iR~~geRqe~----r~-~~~nvlv~------~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 279 PVVNIRDSGERQEG----RE-RGSNVLVG------TDPEAIIQAIEKALSD 318 (346)
T ss_dssp -EEECSSS-S-HHH----HH-TTSEEEET------SSHHHHHHHHHHHHH-
T ss_pred eEEEecCCCCCHHH----Hh-hcceEEeC------CCHHHHHHHHHHHHhC
Confidence 99999333333322 22 45555532 5789999999999975
No 101
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.56 E-value=0.03 Score=55.85 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=62.8
Q ss_pred CCeEecccCCc-hhccCCCCccceee---ccC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLS---HCG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~It---HGG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.+|.+.+|.+. ..++..++ +||. +.| .++++||+++|+|+|+....+ ....+.+ -..|+.+...+
T Consensus 574 ~~V~flG~~~dv~~ll~aaD--v~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~d-g~~GlLv~~~d--- 643 (694)
T PRK15179 574 ERILFTGLSRRVGYWLTQFN--AFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQE-GVTGLTLPADT--- 643 (694)
T ss_pred CcEEEcCCcchHHHHHHhcC--EEEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccC-CCCEEEeCCCC---
Confidence 46888888765 55778888 5554 445 478999999999999986532 3344555 55788887655
Q ss_pred CCHHHHHHHHHHHhcCCc-hHHHHHHHHHH
Q 042249 203 VGREEVATYARGLIQGED-GKLLRDKMRVL 231 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~~-~~~~r~~a~~l 231 (264)
.+.+++.+++.+++.+.. ...+++++++.
T Consensus 644 ~~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 644 VTAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred CChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 566778888877765321 12555554443
No 102
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.48 E-value=0.078 Score=48.93 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=52.7
Q ss_pred CCeEecccCCc---hhccCCCCccceeec---cCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 128 VGLVVPSWAPQ---IQVLSHGSTGGFLSH---CGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 128 ~nv~i~~~vpq---~~lL~~~~~~~~ItH---GG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
.++.+.+|+|+ ..++..++ ++|.- -|. .++.||+++|+|+|+.+..+- ...+.+ |.+....
T Consensus 250 ~~v~~~G~~~~~~~~~~l~~ad--~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i~~--~~~~~~~---- 317 (398)
T cd03796 250 DRVELLGAVPHERVRDVLVQGH--IFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVLPP--DMILLAE---- 317 (398)
T ss_pred CeEEEeCCCCHHHHHHHHHhCC--EEEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhheeC--CceeecC----
Confidence 46888899875 45777888 55532 233 499999999999999876432 223333 3332221
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 042249 201 GLVGREEVATYARGLIQGE 219 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~ 219 (264)
.+.+++.+++.+++.+.
T Consensus 318 --~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 318 --PDVESIVRKLEEAISIL 334 (398)
T ss_pred --CCHHHHHHHHHHHHhCh
Confidence 36799999999999754
No 103
>PHA01633 putative glycosyl transferase group 1
Probab=96.43 E-value=0.064 Score=48.90 Aligned_cols=83 Identities=16% Similarity=0.114 Sum_probs=54.5
Q ss_pred CeEec---ccCCc---hhccCCCCccceeec---cC-chhHHHHHHhCcceeecCC------CchH------HHHHHHHH
Q 042249 129 GLVVP---SWAPQ---IQVLSHGSTGGFLSH---CG-WNSVLESIVHGVPIIAWPL------YAEQ------KMNAVLLT 186 (264)
Q Consensus 129 nv~i~---~~vpq---~~lL~~~~~~~~ItH---GG-~~si~eal~~GvP~l~~P~------~~DQ------~~na~~v~ 186 (264)
++.+. +++++ ..++..++ +||.- =| ..++.||+++|+|+|+--. .+|+ ..+.....
T Consensus 202 ~V~f~g~~G~~~~~dl~~~y~~aD--ifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~ 279 (335)
T PHA01633 202 NVHFVAEFGHNSREYIFAFYGAMD--FTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYY 279 (335)
T ss_pred cEEEEecCCCCCHHHHHHHHHhCC--EEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhc
Confidence 57666 44454 36678888 66653 23 4678999999999998633 2332 22333333
Q ss_pred h-hcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 187 D-DLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 187 ~-~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
+ +.|.|..+.. .+++++.++|.+++..
T Consensus 280 ~~~~g~g~~~~~-----~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 280 DKEHGQKWKIHK-----FQIEDMANAIILAFEL 307 (335)
T ss_pred CcccCceeeecC-----CCHHHHHHHHHHHHhc
Confidence 2 2577777664 6899999999999654
No 104
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.16 E-value=0.23 Score=45.23 Aligned_cols=78 Identities=21% Similarity=0.209 Sum_probs=51.7
Q ss_pred CCeEecccC--Cc---hhccCCCCccceeecc---C-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc
Q 042249 128 VGLVVPSWA--PQ---IQVLSHGSTGGFLSHC---G-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN 198 (264)
Q Consensus 128 ~nv~i~~~v--pq---~~lL~~~~~~~~ItHG---G-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 198 (264)
.++.+.++. +. ..++..++ +|+.-. | ..++.||+++|+|+|+....+ ....+.+ -..|+.+.
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad--~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~-~~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRAST--VVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIED-GETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCe--EEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhccc-CCceEEeC--
Confidence 356666665 32 35677888 666533 2 359999999999999976532 2233444 45666543
Q ss_pred CCCCCCHHHHHHHHHHHhcCC
Q 042249 199 EDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 199 ~~~~~~~~~l~~ai~~ll~~~ 219 (264)
+.+.+..+|.+++.++
T Consensus 323 -----~~~~~a~~i~~ll~~~ 338 (372)
T cd03792 323 -----TVEEAAVRILYLLRDP 338 (372)
T ss_pred -----CcHHHHHHHHHHHcCH
Confidence 3467788999999875
No 105
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.12 E-value=0.052 Score=47.97 Aligned_cols=129 Identities=15% Similarity=0.103 Sum_probs=75.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhc-CCCCeEeccc
Q 042249 57 LFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRT-KGVGLVVPSW 135 (264)
Q Consensus 57 Vyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~i~~~ 135 (264)
+.+..|... ..+....+++++++.+.+++++-..... + .+-....... ...++.+.++
T Consensus 173 ~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~~----------------~---~~~~~~~~~~~~~~~v~~~G~ 231 (335)
T cd03802 173 YLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSDP----------------D---YFYREIAPELLDGPDIEYLGE 231 (335)
T ss_pred EEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCCH----------------H---HHHHHHHHhcccCCcEEEeCC
Confidence 455567663 2344455677777777776654433211 0 0000001111 1357889999
Q ss_pred CCch---hccCCCCccceee--ccC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHH
Q 042249 136 APQI---QVLSHGSTGGFLS--HCG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVA 209 (264)
Q Consensus 136 vpq~---~lL~~~~~~~~It--HGG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~ 209 (264)
+++. .++..+++-++-+ +-| ..++.||+++|+|+|+....+ ....+.+ -..|..+. ..+++.
T Consensus 232 ~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~-~~~g~l~~-------~~~~l~ 299 (335)
T cd03802 232 VGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVED-GVTGFLVD-------SVEELA 299 (335)
T ss_pred CCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeC-CCcEEEeC-------CHHHHH
Confidence 9874 4678888433323 234 358999999999999876532 2233333 33666653 278999
Q ss_pred HHHHHHhcC
Q 042249 210 TYARGLIQG 218 (264)
Q Consensus 210 ~ai~~ll~~ 218 (264)
++|.+++..
T Consensus 300 ~~l~~l~~~ 308 (335)
T cd03802 300 AAVARADRL 308 (335)
T ss_pred HHHHHHhcc
Confidence 999998753
No 106
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.07 E-value=0.45 Score=46.55 Aligned_cols=194 Identities=15% Similarity=0.081 Sum_probs=97.9
Q ss_pred HHHHhhhhccCCCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHH--hc--CC
Q 042249 9 KALMKSRESSFRLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLE--MS--GQ 84 (264)
Q Consensus 9 ~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~--~~--~~ 84 (264)
++++++ +. ++.|||-=+.+.....+..++..+-+.-.+++++|-+-.||-..-=...+..++++.+ .. ..
T Consensus 374 ~~y~~~-----gv-~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l 447 (608)
T PRK01021 374 NLFKDS-----PL-RTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTH 447 (608)
T ss_pred HHHHhc-----CC-CeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCe
Confidence 455664 44 7999996665543222233334444443446789999999964211123444455554 32 33
Q ss_pred eEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCC---eEecccCCchhccCCCCccceeeccCchhHHH
Q 042249 85 RFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVG---LVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLE 161 (264)
Q Consensus 85 ~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n---v~i~~~vpq~~lL~~~~~~~~ItHGG~~si~e 161 (264)
+|+........ .+.+.+.....+ +.+..--....++..|+ +.+.-.| ..++|
T Consensus 448 ~fvvp~a~~~~----------------------~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD--~aLaaSG-TaTLE 502 (608)
T PRK01021 448 QLLVSSANPKY----------------------DHLILEVLQQEGCLHSHIVPSQFRYELMRECD--CALAKCG-TIVLE 502 (608)
T ss_pred EEEEecCchhh----------------------HHHHHHHHhhcCCCCeEEecCcchHHHHHhcC--eeeecCC-HHHHH
Confidence 45443221110 011111111111 12221001257788888 6666555 46789
Q ss_pred HHHhCcceeecCC-CchHHHHHHHHHhhc----------CceeEeeccCC---CCCCHHHHHHHHHHHhcCCc-hHHHHH
Q 042249 162 SIVHGVPIIAWPL-YAEQKMNAVLLTDDL----------KVAWRVKVNED---GLVGREEVATYARGLIQGED-GKLLRD 226 (264)
Q Consensus 162 al~~GvP~l~~P~-~~DQ~~na~~v~~~~----------G~G~~l~~~~~---~~~~~~~l~~ai~~ll~~~~-~~~~r~ 226 (264)
+..+|+||+++=- ..=-..-++++.+ . =+|..+-++-- ..+|+++|.+++ ++|.|++ .+++++
T Consensus 503 aAL~g~PmVV~YK~s~Lty~Iak~Lvk-i~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~ 580 (608)
T PRK01021 503 TALNQTPTIVTCQLRPFDTFLAKYIFK-IILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKD 580 (608)
T ss_pred HHHhCCCEEEEEecCHHHHHHHHHHHh-ccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHH
Confidence 9999999998632 2122344555554 2 12222211110 128999999997 7777652 344555
Q ss_pred HHHHHHHHH
Q 042249 227 KMRVLKDAA 235 (264)
Q Consensus 227 ~a~~l~~~~ 235 (264)
..+++.+.+
T Consensus 581 ~l~~lr~~L 589 (608)
T PRK01021 581 ACRDLYQAM 589 (608)
T ss_pred HHHHHHHHh
Confidence 555555544
No 107
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.03 E-value=0.31 Score=44.65 Aligned_cols=79 Identities=13% Similarity=0.018 Sum_probs=51.8
Q ss_pred CCCeEecccCCch---hccCCCCcccee------eccC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEee
Q 042249 127 GVGLVVPSWAPQI---QVLSHGSTGGFL------SHCG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVK 196 (264)
Q Consensus 127 ~~nv~i~~~vpq~---~lL~~~~~~~~I------tHGG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 196 (264)
.+|+.+.+++|+. ..+.++++.++- +.++ -+.+.|++++|+|+|+.++ ...+.. .+ +..+.
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~-~~-~~~~~ 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRY-ED-EVVLI 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhh-cC-cEEEe
Confidence 3589999999864 467788853332 1223 2468999999999998763 122223 33 33332
Q ss_pred ccCCCCCCHHHHHHHHHHHhcCC
Q 042249 197 VNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 197 ~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
. -+.+++.++|.+++.++
T Consensus 324 ~-----~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 324 A-----DDPEEFVAAIEKALLED 341 (373)
T ss_pred C-----CCHHHHHHHHHHHHhcC
Confidence 2 26899999999987644
No 108
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.01 E-value=0.11 Score=49.87 Aligned_cols=138 Identities=17% Similarity=0.161 Sum_probs=86.4
Q ss_pred CCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhh-hhcCCCCe
Q 042249 52 PNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFL-DRTKGVGL 130 (264)
Q Consensus 52 ~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~~~nv 130 (264)
++.-+||+||+......++.+..=+.-|+..+..++|..+++..+..+.. +-+-+. ..++..++
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~---------------l~~la~~~Gv~~eRL 491 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINAR---------------LRDLAEREGVDSERL 491 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHH---------------HHHHHHHcCCChhhe
Confidence 45679999999999999998888888888999999999887533111100 101011 11233456
Q ss_pred EecccCCch---hccCCCCccceee---ccCchhHHHHHHhCcceeecCCCchHHH--HHHHHHhhcCceeEeeccCCCC
Q 042249 131 VVPSWAPQI---QVLSHGSTGGFLS---HCGWNSVLESIVHGVPIIAWPLYAEQKM--NAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 131 ~i~~~vpq~---~lL~~~~~~~~It---HGG~~si~eal~~GvP~l~~P~~~DQ~~--na~~v~~~~G~G~~l~~~~~~~ 202 (264)
++.+-.|.. +=+.-++ +|+. -||..|..|+|..|||+|.++ ++|+. |+.-+..-+|+--.+-..
T Consensus 492 ~f~p~~~~~~h~a~~~iAD--lvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~s---- 563 (620)
T COG3914 492 RFLPPAPNEDHRARYGIAD--LVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVADS---- 563 (620)
T ss_pred eecCCCCCHHHHHhhchhh--eeeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcCC----
Confidence 665555443 3334456 6664 689999999999999999985 56654 444333325655444332
Q ss_pred CCHHHHHHHHH
Q 042249 203 VGREEVATYAR 213 (264)
Q Consensus 203 ~~~~~l~~ai~ 213 (264)
..+=|.++++
T Consensus 564 -~~dYV~~av~ 573 (620)
T COG3914 564 -RADYVEKAVA 573 (620)
T ss_pred -HHHHHHHHHH
Confidence 2344555554
No 109
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=95.98 E-value=0.037 Score=52.06 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=56.2
Q ss_pred CCeEecccCCchhc---cCCC----Cccceeecc---C-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEee
Q 042249 128 VGLVVPSWAPQIQV---LSHG----STGGFLSHC---G-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVK 196 (264)
Q Consensus 128 ~nv~i~~~vpq~~l---L~~~----~~~~~ItHG---G-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 196 (264)
.++.+.+++++.++ +..+ + +||... | ..+++||+++|+|+|+....+ ....+.+ -..|+.+.
T Consensus 317 ~~V~f~g~~~~~~~~~~~~~a~~~~D--v~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~-~~~G~lv~ 389 (439)
T TIGR02472 317 GKVAYPKHHRPDDVPELYRLAARSRG--IFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIAN-CRNGLLVD 389 (439)
T ss_pred ceEEecCCCCHHHHHHHHHHHhhcCC--EEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcC-CCcEEEeC
Confidence 35777777776443 5443 5 666543 3 469999999999999986533 3344444 55788776
Q ss_pred ccCCCCCCHHHHHHHHHHHhcCC
Q 042249 197 VNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 197 ~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
.. +.+++.++|.++++++
T Consensus 390 ~~-----d~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 390 VL-----DLEAIASALEDALSDS 407 (439)
T ss_pred CC-----CHHHHHHHHHHHHhCH
Confidence 53 6899999999999876
No 110
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.91 E-value=0.17 Score=48.00 Aligned_cols=78 Identities=9% Similarity=-0.075 Sum_probs=50.5
Q ss_pred CeEecccCCc---hhccCCCCccceeec---cCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHh-----hcCceeEee
Q 042249 129 GLVVPSWAPQ---IQVLSHGSTGGFLSH---CGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTD-----DLKVAWRVK 196 (264)
Q Consensus 129 nv~i~~~vpq---~~lL~~~~~~~~ItH---GG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~-----~~G~G~~l~ 196 (264)
++.+....+. ..++..++ +|+.- -|. .+++||+++|+|.|+....+ ....+.+ ..+.|+.+.
T Consensus 347 ~v~~~~~~~~~~~~~~~~~aD--v~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~ 420 (473)
T TIGR02095 347 NVRVIIGYDEALAHLIYAGAD--FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFE 420 (473)
T ss_pred cEEEEEcCCHHHHHHHHHhCC--EEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeC
Confidence 4555444444 24778888 55542 233 47899999999999876532 1112222 027788876
Q ss_pred ccCCCCCCHHHHHHHHHHHhc
Q 042249 197 VNEDGLVGREEVATYARGLIQ 217 (264)
Q Consensus 197 ~~~~~~~~~~~l~~ai~~ll~ 217 (264)
. -+++++.++|.+++.
T Consensus 421 ~-----~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 421 E-----YDPGALLAALSRALR 436 (473)
T ss_pred C-----CCHHHHHHHHHHHHH
Confidence 5 368999999999886
No 111
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.86 E-value=0.1 Score=47.98 Aligned_cols=162 Identities=13% Similarity=0.130 Sum_probs=92.1
Q ss_pred CeEeecccccCCCC--CCCChhhHHHhhccCCCCcEEEEEecCC---CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCccc
Q 042249 23 PVYPVGPLILTGSI--NESDRTDCLKWLDDQPNGSVLFVCFGSG---GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKA 97 (264)
Q Consensus 23 ~~~~vGpl~~~~~~--~~~~~~~~~~wl~~~~~~~vVyvs~GS~---~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~ 97 (264)
+++.+|-...+.-. ......++.+.+.-.++++.++|++=.. ..+..+.+..+++++...+..++++.......
T Consensus 168 ~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~- 246 (365)
T TIGR03568 168 RVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAG- 246 (365)
T ss_pred cEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCC-
Confidence 67788876554211 0112233333333222346888887543 23456788999999988775655554322110
Q ss_pred ccccccccCCCCCCCCCCCCChhhhhhcC-CCCeEecccC---CchhccCCCCccceeeccCchhHHHHHHhCcceeecC
Q 042249 98 TNATYFGVHGMKEENPFDYLPKGFLDRTK-GVGLVVPSWA---PQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWP 173 (264)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~i~~~v---pq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P 173 (264)
+ ..+-+.+..... .+|+.+.+-+ ....++.+++ ++|+-++.+. .||.+.|+|.|.+-
T Consensus 247 --------------~--~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~--~vitdSSggi-~EA~~lg~Pvv~l~ 307 (365)
T TIGR03568 247 --------------S--RIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNAD--AVIGNSSSGI-IEAPSFGVPTINIG 307 (365)
T ss_pred --------------c--hHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCC--EEEEcChhHH-HhhhhcCCCEEeec
Confidence 0 001111111111 3577777644 4466888999 9998875555 99999999999773
Q ss_pred CCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhc
Q 042249 174 LYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQ 217 (264)
Q Consensus 174 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~ 217 (264)
+.+ ...+ .|..+.+-. .+.++|.++++++++
T Consensus 308 ---~R~----e~~~-~g~nvl~vg-----~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 308 ---TRQ----KGRL-RADSVIDVD-----PDKEEIVKAIEKLLD 338 (365)
T ss_pred ---CCc----hhhh-hcCeEEEeC-----CCHHHHHHHHHHHhC
Confidence 211 1112 344333222 578999999999653
No 112
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=95.64 E-value=0.29 Score=50.79 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=60.4
Q ss_pred CCeEecccCCchh---ccCCCC--ccceeec---cC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeecc
Q 042249 128 VGLVVPSWAPQIQ---VLSHGS--TGGFLSH---CG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVN 198 (264)
Q Consensus 128 ~nv~i~~~vpq~~---lL~~~~--~~~~ItH---GG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 198 (264)
.+|.+.+|+++.. ++..++ ..+||.- =| ..++.||+++|+|+|+....+ ....+.. -..|+.+..
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~-g~nGlLVdP- 621 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRV-LDNGLLVDP- 621 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhcc-CCcEEEECC-
Confidence 3577778877643 444441 1266654 23 368999999999999987543 2223334 456887765
Q ss_pred CCCCCCHHHHHHHHHHHhcCCc-hHHHHHHHHH
Q 042249 199 EDGLVGREEVATYARGLIQGED-GKLLRDKMRV 230 (264)
Q Consensus 199 ~~~~~~~~~l~~ai~~ll~~~~-~~~~r~~a~~ 230 (264)
-+.+.|.++|.+++.+++ .+.|.+++.+
T Consensus 622 ----~D~eaLA~AL~~LL~Dpelr~~m~~~gr~ 650 (1050)
T TIGR02468 622 ----HDQQAIADALLKLVADKQLWAECRQNGLK 650 (1050)
T ss_pred ----CCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 368999999999998863 3344444443
No 113
>PLN02275 transferase, transferring glycosyl groups
Probab=95.58 E-value=0.12 Score=47.33 Aligned_cols=75 Identities=19% Similarity=0.172 Sum_probs=51.4
Q ss_pred CCeEecc-cCCchh---ccCCCCccceee-c-----cC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEee
Q 042249 128 VGLVVPS-WAPQIQ---VLSHGSTGGFLS-H-----CG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVK 196 (264)
Q Consensus 128 ~nv~i~~-~vpq~~---lL~~~~~~~~It-H-----GG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 196 (264)
.|+.+.. |+|..+ +|+.++ +||. + -| -+++.||+++|+|+|+....+ +...+.+ -+.|+.+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aD--v~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg----~~eiv~~-g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSAD--LGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IGELVKD-GKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCC--EEEEeccccccccccHHHHHHHHCCCCEEEecCCC----hHHHccC-CCCeEEEC
Confidence 3566544 787744 588899 6653 1 12 357999999999999975422 4455555 67888773
Q ss_pred ccCCCCCCHHHHHHHHHHHh
Q 042249 197 VNEDGLVGREEVATYARGLI 216 (264)
Q Consensus 197 ~~~~~~~~~~~l~~ai~~ll 216 (264)
+.+++.++|.+++
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 3688888888764
No 114
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.57 E-value=0.15 Score=48.10 Aligned_cols=70 Identities=9% Similarity=-0.042 Sum_probs=45.3
Q ss_pred hccCCCCccceeec----cCchhHHHHHHhCcceeecCCCc--hHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHH
Q 042249 140 QVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYA--EQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYAR 213 (264)
Q Consensus 140 ~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~ 213 (264)
.++..++ +++.- +-..+.+||+++|+|.|+....+ |-..+...-.+ .|.|+.+.. -+.+++.++|.
T Consensus 366 ~~~~~aD--v~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~-~~~G~~~~~-----~~~~~l~~~i~ 437 (476)
T cd03791 366 LIYAGAD--FFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTG-EGTGFVFEG-----YNADALLAALR 437 (476)
T ss_pred HHHHhCC--EEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCC-CCCeEEeCC-----CCHHHHHHHHH
Confidence 4677788 55532 11247899999999999876532 21111111112 457888876 36899999999
Q ss_pred HHhc
Q 042249 214 GLIQ 217 (264)
Q Consensus 214 ~ll~ 217 (264)
+++.
T Consensus 438 ~~l~ 441 (476)
T cd03791 438 RALA 441 (476)
T ss_pred HHHH
Confidence 9885
No 115
>PRK14098 glycogen synthase; Provisional
Probab=95.56 E-value=0.27 Score=47.10 Aligned_cols=79 Identities=9% Similarity=-0.070 Sum_probs=51.7
Q ss_pred CCeEecccCCc---hhccCCCCccceeecc---C-chhHHHHHHhCcceeecCCCc--hHHHHHHHHHhhcCceeEeecc
Q 042249 128 VGLVVPSWAPQ---IQVLSHGSTGGFLSHC---G-WNSVLESIVHGVPIIAWPLYA--EQKMNAVLLTDDLKVAWRVKVN 198 (264)
Q Consensus 128 ~nv~i~~~vpq---~~lL~~~~~~~~ItHG---G-~~si~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~ 198 (264)
.++.+..+.+. ..+++.++ +|+.-. | ..+.+||+.+|+|.|+....+ |...+ ...+ -+.|+.+..
T Consensus 362 ~~V~~~g~~~~~~~~~~~a~aD--i~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~-~~~G~l~~~- 435 (489)
T PRK14098 362 EQVSVQTEFTDAFFHLAIAGLD--MLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSED-KGSGFIFHD- 435 (489)
T ss_pred CCEEEEEecCHHHHHHHHHhCC--EEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCC-CCceeEeCC-
Confidence 46777777766 35788888 666432 2 247889999999888876532 21110 0112 357777765
Q ss_pred CCCCCCHHHHHHHHHHHh
Q 042249 199 EDGLVGREEVATYARGLI 216 (264)
Q Consensus 199 ~~~~~~~~~l~~ai~~ll 216 (264)
.+++++.++|.+++
T Consensus 436 ----~d~~~la~ai~~~l 449 (489)
T PRK14098 436 ----YTPEALVAKLGEAL 449 (489)
T ss_pred ----CCHHHHHHHHHHHH
Confidence 46899999999876
No 116
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.14 E-value=0.36 Score=46.93 Aligned_cols=73 Identities=15% Similarity=0.096 Sum_probs=50.2
Q ss_pred CCeEecccCCc-hhccCCCCccceeec---cC-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVVPSWAPQ-IQVLSHGSTGGFLSH---CG-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i~~~vpq-~~lL~~~~~~~~ItH---GG-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.++.+.+|... ..+|..++ +||.. -| .+++.||+++|+|+|+.... -+...+.+ -..|+.+...
T Consensus 455 d~V~FlG~~~Dv~~~LaaAD--VfVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~d-G~nG~LVp~~---- 523 (578)
T PRK15490 455 ERILFVGASRDVGYWLQKMN--VFILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIE-GVSGFILDDA---- 523 (578)
T ss_pred CcEEECCChhhHHHHHHhCC--EEEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHccc-CCcEEEECCC----
Confidence 47888888644 55788888 77653 34 56999999999999987653 34455556 6778887654
Q ss_pred CCHHHHHHHH
Q 042249 203 VGREEVATYA 212 (264)
Q Consensus 203 ~~~~~l~~ai 212 (264)
+.+.+.+++
T Consensus 524 -D~~aLa~ai 532 (578)
T PRK15490 524 -QTVNLDQAC 532 (578)
T ss_pred -ChhhHHHHH
Confidence 344555444
No 117
>PLN02949 transferase, transferring glycosyl groups
Probab=94.98 E-value=0.24 Score=47.16 Aligned_cols=115 Identities=12% Similarity=0.023 Sum_probs=65.3
Q ss_pred CCeEecccCCch---hccCCCCccceee---ccCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHhh-cC-ceeEeecc
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLS---HCGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDD-LK-VAWRVKVN 198 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~It---HGG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~-~G-~G~~l~~~ 198 (264)
.++.+.+++|+. .+|..++ ++|+ +-|. .++.||+++|+|.|+....+-- ...+.++ .| .|+..
T Consensus 335 ~~V~f~g~v~~~el~~ll~~a~--~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~--- 406 (463)
T PLN02949 335 GDVEFHKNVSYRDLVRLLGGAV--AGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA--- 406 (463)
T ss_pred CcEEEeCCCCHHHHHHHHHhCc--EEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC---
Confidence 468888898764 4677787 5653 2333 3799999999999997543200 0000110 01 23222
Q ss_pred CCCCCCHHHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhhcc
Q 042249 199 EDGLVGREEVATYARGLIQGE-D-GKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLEND 262 (264)
Q Consensus 199 ~~~~~~~~~l~~ai~~ll~~~-~-~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~~~ 262 (264)
-+.+++.++|.+++.++ + .+++.+++++..+ .-+...-.+++.+.+.++.++
T Consensus 407 ----~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~--------~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 407 ----TTVEEYADAILEVLRMRETERLEIAAAARKRAN--------RFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred ----CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH--------HcCHHHHHHHHHHHHHHHHhh
Confidence 26799999999999843 1 2234444443322 233344445666666655443
No 118
>PRK00654 glgA glycogen synthase; Provisional
Probab=94.98 E-value=0.44 Score=45.20 Aligned_cols=70 Identities=10% Similarity=0.008 Sum_probs=45.9
Q ss_pred hccCCCCccceeec---cCc-hhHHHHHHhCcceeecCCCc--hHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHH
Q 042249 140 QVLSHGSTGGFLSH---CGW-NSVLESIVHGVPIIAWPLYA--EQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYAR 213 (264)
Q Consensus 140 ~lL~~~~~~~~ItH---GG~-~si~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~ 213 (264)
.++..++ +||.- -|. .+.+||+++|+|.|+....+ |...+...-.+ .+.|+.+... +++++.++|.
T Consensus 352 ~~~~~aD--v~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv~~~-----d~~~la~~i~ 423 (466)
T PRK00654 352 RIYAGAD--MFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVFDDF-----NAEDLLRALR 423 (466)
T ss_pred HHHhhCC--EEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEeCCC-----CHHHHHHHHH
Confidence 5678888 56542 233 48899999999999875422 21111100012 3778888663 6899999999
Q ss_pred HHhc
Q 042249 214 GLIQ 217 (264)
Q Consensus 214 ~ll~ 217 (264)
+++.
T Consensus 424 ~~l~ 427 (466)
T PRK00654 424 RALE 427 (466)
T ss_pred HHHH
Confidence 9886
No 119
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.70 E-value=0.62 Score=42.92 Aligned_cols=205 Identities=18% Similarity=0.157 Sum_probs=107.2
Q ss_pred CCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCH---HHHHHHHHHHHhc--CCeEEEEEeCCC
Q 042249 20 RLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQ---KQLNELALGLEMS--GQRFLWVVKCPD 94 (264)
Q Consensus 20 ~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~---~~~~~l~~al~~~--~~~viw~~~~~~ 94 (264)
..| ..|||-=+.+..+-.+....+.+-+....+++++.+..||-..-=. ..+...+..++.. +.+|+.-+....
T Consensus 155 g~~-~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~ 233 (381)
T COG0763 155 GLP-CTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK 233 (381)
T ss_pred CCC-eEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH
Confidence 565 8899966655443223344455555555577899999999743111 2233333334322 345555443321
Q ss_pred cccccccccccCCCCCCCCCCCCChhhhhhcC-CCCeEecccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecC
Q 042249 95 EKATNATYFGVHGMKEENPFDYLPKGFLDRTK-GVGLVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWP 173 (264)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~i~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P 173 (264)
.+ .+-..+..... ..++.+.+- --..++..++ +.+.-+| .-++|+..+|+|||+.=
T Consensus 234 ~~-------------------~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~aD--~al~aSG-T~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 234 YR-------------------RIIEEALKWEVAGLSLILIDG-EKRKAFAAAD--AALAASG-TATLEAALAGTPMVVAY 290 (381)
T ss_pred HH-------------------HHHHHHhhccccCceEEecCc-hHHHHHHHhh--HHHHhcc-HHHHHHHHhCCCEEEEE
Confidence 10 00000000000 011222111 1133566677 4444443 45789999999999852
Q ss_pred CCc-hHHHHHHHHHhhcCc--------eeEee----ccCCCCCCHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHhhc
Q 042249 174 LYA-EQKMNAVLLTDDLKV--------AWRVK----VNEDGLVGREEVATYARGLIQGE-DGKLLRDKMRVLKDAAANAL 239 (264)
Q Consensus 174 ~~~-DQ~~na~~v~~~~G~--------G~~l~----~~~~~~~~~~~l~~ai~~ll~~~-~~~~~r~~a~~l~~~~~~a~ 239 (264)
-.. =-++-++++.+ ... |..+- ..+ ++++.|.+++..++.|+ +.+.+++...++.+.++
T Consensus 291 k~~~it~~iak~lvk-~~yisLpNIi~~~~ivPEliq~~---~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~--- 363 (381)
T COG0763 291 KVKPITYFIAKRLVK-LPYVSLPNILAGREIVPELIQED---CTPENLARALEELLLNGDRREALKEKFRELHQYLR--- 363 (381)
T ss_pred eccHHHHHHHHHhcc-CCcccchHHhcCCccchHHHhhh---cCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHc---
Confidence 211 12334555555 331 11111 122 78999999999999986 24566666666666666
Q ss_pred CCCCChHHHHHHHHHHH
Q 042249 240 SPDGFSTKSLANVAQKW 256 (264)
Q Consensus 240 ~~gg~~~~~~~~~~~~~ 256 (264)
.++++....+-+++.+
T Consensus 364 -~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 364 -EDPASEIAAQAVLELL 379 (381)
T ss_pred -CCcHHHHHHHHHHHHh
Confidence 4556666666665544
No 120
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=94.58 E-value=0.27 Score=35.41 Aligned_cols=82 Identities=12% Similarity=0.059 Sum_probs=48.4
Q ss_pred ccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcC-ceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 042249 153 HCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLK-VAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVL 231 (264)
Q Consensus 153 HGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l 231 (264)
+|-...+.|++++|+|+|+-+. ......+.+ | -++.. -+.+++.++|..+++++ ...++-+++-
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-------~~~~el~~~i~~ll~~~--~~~~~ia~~a 73 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-------NDPEELAEKIEYLLENP--EERRRIAKNA 73 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-------CCHHHHHHHHHHHHCCH--HHHHHHHHHH
Confidence 4445689999999999999765 223333322 3 22222 26899999999999987 2233333333
Q ss_pred HHHHHhhcCCCCChHHHHHHHH
Q 042249 232 KDAAANALSPDGFSTKSLANVA 253 (264)
Q Consensus 232 ~~~~~~a~~~gg~~~~~~~~~~ 253 (264)
.+.++ ..-+....+++|+
T Consensus 74 ~~~v~----~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVL----KRHTWEHRAEQIL 91 (92)
T ss_pred HHHHH----HhCCHHHHHHHHH
Confidence 33333 3455555555544
No 121
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=94.34 E-value=0.21 Score=46.70 Aligned_cols=79 Identities=16% Similarity=-0.006 Sum_probs=53.3
Q ss_pred CCeEecccCCch---hccCCCCccceeecc---C-chhHHHHHHhCcceeecCCCchHHHHHHHHH---hhcCceeEeec
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLSHC---G-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLT---DDLKVAWRVKV 197 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~ItHG---G-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~---~~~G~G~~l~~ 197 (264)
.+|.+.+++|+. .+|..++ ++|+-. | ..++.||+++|+|.|+.-..+.- ...+. + -..|+..
T Consensus 305 ~~V~f~g~v~~~~l~~~l~~ad--v~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~-g~~G~l~-- 376 (419)
T cd03806 305 DKVEFVVNAPFEELLEELSTAS--IGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIVVPWDG-GPTGFLA-- 376 (419)
T ss_pred CeEEEecCCCHHHHHHHHHhCe--EEEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hheeeccCC-CCceEEe--
Confidence 478888888864 5777888 555321 2 34889999999999986543211 11122 3 4566653
Q ss_pred cCCCCCCHHHHHHHHHHHhcCC
Q 042249 198 NEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 198 ~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
-+.+++.++|.++++++
T Consensus 377 -----~d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS 393 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC
Confidence 26899999999999865
No 122
>PHA01630 putative group 1 glycosyl transferase
Probab=94.25 E-value=3.6 Score=37.30 Aligned_cols=86 Identities=8% Similarity=0.045 Sum_probs=46.2
Q ss_pred hhccCCCCccceeecc-C-chhHHHHHHhCcceeecCCCc--hHHHH---HHHHHh----------hcCceeEeeccCCC
Q 042249 139 IQVLSHGSTGGFLSHC-G-WNSVLESIVHGVPIIAWPLYA--EQKMN---AVLLTD----------DLKVAWRVKVNEDG 201 (264)
Q Consensus 139 ~~lL~~~~~~~~ItHG-G-~~si~eal~~GvP~l~~P~~~--DQ~~n---a~~v~~----------~~G~G~~l~~~~~~ 201 (264)
..++..+++-++-++. | ..++.||+++|+|+|+....+ |...+ +..+.. ..++|+.+.
T Consensus 204 ~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~----- 278 (331)
T PHA01630 204 YSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLD----- 278 (331)
T ss_pred HHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccC-----
Confidence 3457778832222332 2 468999999999999986543 32111 100000 012344332
Q ss_pred CCCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042249 202 LVGREEVATYARGLIQGEDGKLLRDKMRV 230 (264)
Q Consensus 202 ~~~~~~l~~ai~~ll~~~~~~~~r~~a~~ 230 (264)
.+.+++.+++.+++.+++.+.++++...
T Consensus 279 -~~~~~~~~~ii~~l~~~~~~~~~~~~~~ 306 (331)
T PHA01630 279 -PDIEDAYQKLLEALANWTPEKKKENLEG 306 (331)
T ss_pred -CCHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 2457788888888876321244444333
No 123
>PLN02316 synthase/transferase
Probab=93.77 E-value=1.9 Score=44.99 Aligned_cols=118 Identities=6% Similarity=-0.085 Sum_probs=69.4
Q ss_pred CeEecccCCch---hccCCCCccceeecc---C-chhHHHHHHhCcceeecCCCc--hHHHHHH----HHHh--hcCcee
Q 042249 129 GLVVPSWAPQI---QVLSHGSTGGFLSHC---G-WNSVLESIVHGVPIIAWPLYA--EQKMNAV----LLTD--DLKVAW 193 (264)
Q Consensus 129 nv~i~~~vpq~---~lL~~~~~~~~ItHG---G-~~si~eal~~GvP~l~~P~~~--DQ~~na~----~v~~--~~G~G~ 193 (264)
++.+....+.. .++..++ +|+.-. | ..+.+||+.+|+|.|+....+ |...... +.+. .-+.|+
T Consensus 901 rV~f~g~~de~lah~iyaaAD--iflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGf 978 (1036)
T PLN02316 901 RARLCLTYDEPLSHLIYAGAD--FILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGF 978 (1036)
T ss_pred eEEEEecCCHHHHHHHHHhCc--EEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceE
Confidence 45554333442 5788888 677432 2 358999999999988765532 3221110 0000 024677
Q ss_pred EeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHh
Q 042249 194 RVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKN 258 (264)
Q Consensus 194 ~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 258 (264)
.+.. .+++.|..+|.+++.. |.+....+++..++++...-|-...+.+.++-.++
T Consensus 979 lf~~-----~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 979 SFDG-----ADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred EeCC-----CCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 7765 4789999999999973 44444445666665554455544555555554443
No 124
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.36 E-value=0.49 Score=45.78 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=61.5
Q ss_pred CeEecccCC--c-hhccCCCCccceeecc---CchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 129 GLVVPSWAP--Q-IQVLSHGSTGGFLSHC---GWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 129 nv~i~~~vp--q-~~lL~~~~~~~~ItHG---G~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.|.+.++.+ + ..++..+. ++|.-+ |.++..||+.+|+|+| .......+.+ ..=|..+
T Consensus 410 ~v~f~gy~~e~dl~~~~~~ar--l~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li------- 472 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLR--LIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYII------- 472 (519)
T ss_pred EEEEEecCCHHHHHHHHhhhe--EEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEe-------
Confidence 577777776 3 45677777 777665 6779999999999999 1112233333 4444444
Q ss_pred CCHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHH
Q 042249 203 VGREEVATYARGLIQGED-GKLLRDKMRVLKDAAA 236 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~~-~~~~r~~a~~l~~~~~ 236 (264)
-+..+|.++|..+|.+.. +..+...+-+.++...
T Consensus 473 ~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 473 DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 157999999999999873 5556666666555543
No 125
>PLN02846 digalactosyldiacylglycerol synthase
Probab=93.30 E-value=0.87 Score=43.40 Aligned_cols=73 Identities=10% Similarity=0.050 Sum_probs=50.2
Q ss_pred ecccCCchhccCCCCccceeecc----CchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHH
Q 042249 132 VPSWAPQIQVLSHGSTGGFLSHC----GWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREE 207 (264)
Q Consensus 132 i~~~vpq~~lL~~~~~~~~ItHG----G~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~ 207 (264)
+.++.+...++...+ +||.-+ =..++.||+++|+|+|+.-... + ..+.+ -+.|... -+.++
T Consensus 288 f~G~~~~~~~~~~~D--vFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~-~~ng~~~-------~~~~~ 352 (462)
T PLN02846 288 YPGRDHADPLFHDYK--VFLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQ-FPNCRTY-------DDGKG 352 (462)
T ss_pred ECCCCCHHHHHHhCC--EEEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeec-CCceEec-------CCHHH
Confidence 455656667888888 777663 3578999999999999975432 1 33333 3344333 25789
Q ss_pred HHHHHHHHhcCC
Q 042249 208 VATYARGLIQGE 219 (264)
Q Consensus 208 l~~ai~~ll~~~ 219 (264)
+.+++.++|.++
T Consensus 353 ~a~ai~~~l~~~ 364 (462)
T PLN02846 353 FVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHccC
Confidence 999999999754
No 126
>PRK10125 putative glycosyl transferase; Provisional
Probab=93.30 E-value=2.7 Score=39.18 Aligned_cols=61 Identities=16% Similarity=0.072 Sum_probs=40.5
Q ss_pred hhccCCCCccceeec----cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHH
Q 042249 139 IQVLSHGSTGGFLSH----CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYA 212 (264)
Q Consensus 139 ~~lL~~~~~~~~ItH----GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai 212 (264)
..+++.++ +||.- |-..++.||+++|+|+|+....+ -+ .+.. .+.|+.+... +.+++.+.+
T Consensus 301 ~~~y~~aD--vfV~pS~~Egfp~vilEAmA~G~PVVat~~gG-~~----Eiv~-~~~G~lv~~~-----d~~~La~~~ 365 (405)
T PRK10125 301 MSALNQMD--ALVFSSRVDNYPLILCEALSIGVPVIATHSDA-AR----EVLQ-KSGGKTVSEE-----EVLQLAQLS 365 (405)
T ss_pred HHHHHhCC--EEEECCccccCcCHHHHHHHcCCCEEEeCCCC-hH----HhEe-CCcEEEECCC-----CHHHHHhcc
Confidence 34556677 55543 22468999999999999998765 11 1334 3578888764 567777643
No 127
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=93.26 E-value=3.6 Score=37.52 Aligned_cols=139 Identities=17% Similarity=0.196 Sum_probs=79.2
Q ss_pred ChhhHHHhhccCCCCcEEEEEecCCCC----CCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCC
Q 042249 40 DRTDCLKWLDDQPNGSVLFVCFGSGGS----LSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFD 115 (264)
Q Consensus 40 ~~~~~~~wl~~~~~~~vVyvs~GS~~~----~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (264)
.+.+..+-+.. ++.+.|++=+-+..+ .....+.+++..|++.+..++...+.... .
T Consensus 166 Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-------------------~ 225 (335)
T PF04007_consen 166 PDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-------------------R 225 (335)
T ss_pred CChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-------------------h
Confidence 34455555553 245677776655322 23355778889998888764444332211 0
Q ss_pred CCChhhhhhcCCCCeEe-cccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeE
Q 042249 116 YLPKGFLDRTKGVGLVV-PSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWR 194 (264)
Q Consensus 116 ~lp~~~~~~~~~~nv~i-~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 194 (264)
.+-+.+ ++.+ ..-+.-..+|.+++ ++|+=|| ....||...|+|.|.+ +-++-...-+.+.+ .|. .
T Consensus 226 ~~~~~~-------~~~i~~~~vd~~~Ll~~a~--l~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gl--l 291 (335)
T PF04007_consen 226 ELFEKY-------GVIIPPEPVDGLDLLYYAD--LVIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGL--L 291 (335)
T ss_pred hHHhcc-------CccccCCCCCHHHHHHhcC--EEEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCC--e
Confidence 111111 2222 23344457999999 9998876 7789999999999974 11221122234566 665 2
Q ss_pred eeccCCCCCCHHHHHHHHHHHhc
Q 042249 195 VKVNEDGLVGREEVATYARGLIQ 217 (264)
Q Consensus 195 l~~~~~~~~~~~~l~~ai~~ll~ 217 (264)
... .+.+++.+.++..+.
T Consensus 292 ~~~-----~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 292 YHS-----TDPDEIVEYVRKNLG 309 (335)
T ss_pred Eec-----CCHHHHHHHHHHhhh
Confidence 222 367787776666553
No 128
>PLN02939 transferase, transferring glycosyl groups
Probab=93.19 E-value=1.2 Score=45.83 Aligned_cols=83 Identities=5% Similarity=-0.007 Sum_probs=53.2
Q ss_pred CCeEecccCCch---hccCCCCccceeecc---C-chhHHHHHHhCcceeecCCCc--hHHHH--HHHHHhhcCceeEee
Q 042249 128 VGLVVPSWAPQI---QVLSHGSTGGFLSHC---G-WNSVLESIVHGVPIIAWPLYA--EQKMN--AVLLTDDLKVAWRVK 196 (264)
Q Consensus 128 ~nv~i~~~vpq~---~lL~~~~~~~~ItHG---G-~~si~eal~~GvP~l~~P~~~--DQ~~n--a~~v~~~~G~G~~l~ 196 (264)
.+|.+..+.+.. .++..++ +||.-. | ..+++||+.+|+|.|+....+ |-..+ ...+..+-+.|+.+.
T Consensus 837 drV~FlG~~de~lah~IYAaAD--IFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASD--MFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCC--EEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 367777777653 5788888 777532 2 358999999999999876533 22111 111111135677765
Q ss_pred ccCCCCCCHHHHHHHHHHHhc
Q 042249 197 VNEDGLVGREEVATYARGLIQ 217 (264)
Q Consensus 197 ~~~~~~~~~~~l~~ai~~ll~ 217 (264)
. .+++.+..+|.+++.
T Consensus 915 ~-----~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 915 T-----PDEQGLNSALERAFN 930 (977)
T ss_pred C-----CCHHHHHHHHHHHHH
Confidence 5 368889999988774
No 129
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=92.68 E-value=1.3 Score=42.17 Aligned_cols=104 Identities=11% Similarity=-0.005 Sum_probs=68.4
Q ss_pred cccCCch---hccCCCCccceee---ccCc-hhHHHHHHhCcc----eeecCCCchHHHHHHHHHhhcCceeEeeccCCC
Q 042249 133 PSWAPQI---QVLSHGSTGGFLS---HCGW-NSVLESIVHGVP----IIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDG 201 (264)
Q Consensus 133 ~~~vpq~---~lL~~~~~~~~It---HGG~-~si~eal~~GvP----~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 201 (264)
...+++. +++..++ +|+. +-|. .++.||+++|+| +|+--+.+-.. . ++-|+.+++
T Consensus 341 ~~~~~~~el~aly~aaD--v~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~-------~-l~~gllVnP---- 406 (456)
T TIGR02400 341 NRSYDREELMALYRAAD--VGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ-------E-LNGALLVNP---- 406 (456)
T ss_pred cCCCCHHHHHHHHHhCc--EEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH-------H-hCCcEEECC----
Confidence 3445554 4577788 5664 3454 578899999999 66655543221 1 234677765
Q ss_pred CCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Q 042249 202 LVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWK 257 (264)
Q Consensus 202 ~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 257 (264)
.+.+++.++|.++++.+. ++.+++.+++.+.+.. .+...=.++++++|.
T Consensus 407 -~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 -YDIDGMADAIARALTMPL-EEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred -CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 578999999999998542 3566666666666552 566667778887764
No 130
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=91.32 E-value=0.87 Score=40.68 Aligned_cols=144 Identities=10% Similarity=0.013 Sum_probs=79.5
Q ss_pred HhhccCCCCcEEEEEecCC---CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhh
Q 042249 46 KWLDDQPNGSVLFVCFGSG---GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFL 122 (264)
Q Consensus 46 ~wl~~~~~~~vVyvs~GS~---~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 122 (264)
.|+....+++.|.+..|+. -.++.+.+.+++..+.+.+.++++..+++... ...+.+.
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~-------------------~~~~~i~ 231 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEK-------------------QRAERIA 231 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHH-------------------HHHHHHH
Confidence 4554433456676666654 34788889999999877677777654433210 0011111
Q ss_pred hhcCCCCeEecccCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCcee-EeeccCC
Q 042249 123 DRTKGVGLVVPSWAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAW-RVKVNED 200 (264)
Q Consensus 123 ~~~~~~nv~i~~~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~-~l~~~~~ 200 (264)
......++.-..-+++ .+++.+++ +||+.- .|.++=|.+.|+|.|++= ... +..+..- +|-.. .+....-
T Consensus 232 ~~~~~~~l~g~~sL~el~ali~~a~--l~I~~D-Sgp~HlAaa~g~P~i~lf-g~t---~p~~~~P-~~~~~~~~~~~~~ 303 (319)
T TIGR02193 232 EALPGAVVLPKMSLAEVAALLAGAD--AVVGVD-TGLTHLAAALDKPTVTLY-GAT---DPGRTGG-YGKPNVALLGESG 303 (319)
T ss_pred hhCCCCeecCCCCHHHHHHHHHcCC--EEEeCC-ChHHHHHHHcCCCEEEEE-CCC---CHhhccc-CCCCceEEccCcc
Confidence 1111111110112333 67888899 899874 778888999999999861 111 1111111 22211 1111111
Q ss_pred CCCCHHHHHHHHHHHh
Q 042249 201 GLVGREEVATYARGLI 216 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll 216 (264)
..++++++.++++++|
T Consensus 304 ~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 304 ANPTPDEVLAALEELL 319 (319)
T ss_pred CCCCHHHHHHHHHhhC
Confidence 1389999999998875
No 131
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=90.25 E-value=8.1 Score=34.85 Aligned_cols=59 Identities=15% Similarity=0.135 Sum_probs=42.4
Q ss_pred CchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHH---HHHHHHhhcCceeEeec
Q 042249 137 PQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKM---NAVLLTDDLKVAWRVKV 197 (264)
Q Consensus 137 pq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~---na~~v~~~~G~G~~l~~ 197 (264)
|+..+|..++. +|||---.+-+.||+..|+|+.++|+-.-... ....+.+ .|.-..+..
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~-~g~~r~~~~ 282 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEE-RGAVRPFTG 282 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHH-CCCEEECCC
Confidence 67788988884 67777778999999999999999998761122 2234555 666655543
No 132
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=88.92 E-value=5.6 Score=37.66 Aligned_cols=93 Identities=9% Similarity=0.126 Sum_probs=62.4
Q ss_pred CCeEe-cccCC-c-hhccCCCCccceeeccC--chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 128 VGLVV-PSWAP-Q-IQVLSHGSTGGFLSHCG--WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 128 ~nv~i-~~~vp-q-~~lL~~~~~~~~ItHGG--~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
.|+++ .++.+ . ..++..|++=+-|+||. ..++.||+.+|+|++..=...... ..+.. |..+..
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~---~~i~~----g~l~~~----- 395 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNR---DFIAS----ENIFEH----- 395 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCc---ccccC----CceecC-----
Confidence 46554 45566 3 67899999877888877 579999999999999975432211 11111 333333
Q ss_pred CCHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 042249 203 VGREEVATYARGLIQGEDGKLLRDKMRVLKDA 234 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~ 234 (264)
-+.+++.++|.++|.++ +.++++..+-++.
T Consensus 396 ~~~~~m~~~i~~lL~d~--~~~~~~~~~q~~~ 425 (438)
T TIGR02919 396 NEVDQLISKLKDLLNDP--NQFRELLEQQREH 425 (438)
T ss_pred CCHHHHHHHHHHHhcCH--HHHHHHHHHHHHH
Confidence 35799999999999886 3456655554443
No 133
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=88.85 E-value=0.72 Score=42.57 Aligned_cols=89 Identities=15% Similarity=0.140 Sum_probs=65.5
Q ss_pred CCeEec---ccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 128 VGLVVP---SWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 128 ~nv~i~---~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
+++.+. +|.+...++.++- +++|-.|. -.-||...|+|.+++=...++|.- .+ .|.-+.+. .+
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~--~iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE~----v~-agt~~lvg------~~ 327 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAF--LILTDSGG-IQEEAPSLGKPVLVLRDTTERPEG----VE-AGTNILVG------TD 327 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhce--EEEecCCc-hhhhHHhcCCcEEeeccCCCCccc----ee-cCceEEeC------cc
Confidence 356654 3667788888888 88888753 567999999999999888888872 33 45555554 46
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 042249 205 REEVATYARGLIQGEDGKLLRDKMRVLKD 233 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~~~~~r~~a~~l~~ 233 (264)
.+.|.+++.++++++ +..+|++....
T Consensus 328 ~~~i~~~~~~ll~~~---~~~~~m~~~~n 353 (383)
T COG0381 328 EENILDAATELLEDE---EFYERMSNAKN 353 (383)
T ss_pred HHHHHHHHHHHhhCh---HHHHHHhcccC
Confidence 799999999999986 66665544333
No 134
>PLN02501 digalactosyldiacylglycerol synthase
Probab=88.44 E-value=2.9 Score=41.97 Aligned_cols=75 Identities=9% Similarity=0.045 Sum_probs=50.4
Q ss_pred eEecccCCch-hccCCCCccceeecc---C-chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 130 LVVPSWAPQI-QVLSHGSTGGFLSHC---G-WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 130 v~i~~~vpq~-~lL~~~~~~~~ItHG---G-~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
+.+.++.+.. .++..++ +||.-. | ..+++||+++|+|+|+....+... +.. -+.|. +. -+
T Consensus 603 V~FLG~~dd~~~lyasaD--VFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~-g~nGl-l~------~D 667 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYK--VFINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS-FPNCL-TY------KT 667 (794)
T ss_pred EEecCCCCCHHHHHHhCC--EEEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee-cCCeE-ec------CC
Confidence 5556666654 4888888 666532 2 468899999999999987654221 222 22222 21 25
Q ss_pred HHHHHHHHHHHhcCC
Q 042249 205 REEVATYARGLIQGE 219 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~ 219 (264)
.+++.++|.++|.++
T Consensus 668 ~EafAeAI~~LLsd~ 682 (794)
T PLN02501 668 SEDFVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999999876
No 135
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=87.54 E-value=2 Score=34.98 Aligned_cols=48 Identities=19% Similarity=0.116 Sum_probs=35.0
Q ss_pred CCCeEecccCCc----hhccCCCCccceeeccC----chhHHHHHHhCcceeecCCCc
Q 042249 127 GVGLVVPSWAPQ----IQVLSHGSTGGFLSHCG----WNSVLESIVHGVPIIAWPLYA 176 (264)
Q Consensus 127 ~~nv~i~~~vpq----~~lL~~~~~~~~ItHGG----~~si~eal~~GvP~l~~P~~~ 176 (264)
..|+.+.++++. ..++..++ ++|+-.. .+++.||+++|+|+|+.+...
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~d--i~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAAD--VFVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCC--EEEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 347888888632 23444477 6776665 689999999999999987644
No 136
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=87.29 E-value=2.9 Score=40.88 Aligned_cols=81 Identities=17% Similarity=0.096 Sum_probs=47.7
Q ss_pred chhccCCCCccceee-ccCc-hhHHHHHHhCcceeecCCCc-hHHHHHHHHHhhcCceeEeeccCCC--CCCHHHHHHHH
Q 042249 138 QIQVLSHGSTGGFLS-HCGW-NSVLESIVHGVPIIAWPLYA-EQKMNAVLLTDDLKVAWRVKVNEDG--LVGREEVATYA 212 (264)
Q Consensus 138 q~~lL~~~~~~~~It-HGG~-~si~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~~--~~~~~~l~~ai 212 (264)
..+++..|++.++-+ +=|+ -++.||+++|+|+|+....+ ..... ..+......|+.+...... .-+.++|.++|
T Consensus 468 y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m 546 (590)
T cd03793 468 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQYM 546 (590)
T ss_pred hHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHHH
Confidence 456777788433323 3454 58999999999999987643 22221 1222211257776532200 02467888888
Q ss_pred HHHhcCC
Q 042249 213 RGLIQGE 219 (264)
Q Consensus 213 ~~ll~~~ 219 (264)
.+++..+
T Consensus 547 ~~~~~~~ 553 (590)
T cd03793 547 YEFCQLS 553 (590)
T ss_pred HHHhCCc
Confidence 8888654
No 137
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=86.43 E-value=3.5 Score=42.07 Aligned_cols=101 Identities=12% Similarity=0.045 Sum_probs=65.1
Q ss_pred hhccCCCCccceeec---cCch-hHHHHHHhCcc---eeecC-CCchHHHHHHHHHhhcC-ceeEeeccCCCCCCHHHHH
Q 042249 139 IQVLSHGSTGGFLSH---CGWN-SVLESIVHGVP---IIAWP-LYAEQKMNAVLLTDDLK-VAWRVKVNEDGLVGREEVA 209 (264)
Q Consensus 139 ~~lL~~~~~~~~ItH---GG~~-si~eal~~GvP---~l~~P-~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~l~ 209 (264)
.+++..++ +|+.- -|+| +.+|++++|+| +++++ +.+- +. . +| .|+.+++ .+.+++.
T Consensus 370 ~aly~~AD--vfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~----~~---~-l~~~allVnP-----~D~~~lA 434 (797)
T PLN03063 370 CALYAITD--VMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGA----GQ---S-LGAGALLVNP-----WNITEVS 434 (797)
T ss_pred HHHHHhCC--EEEeCccccccCcchhhHheeecCCCCCEEeeCCcCc----hh---h-hcCCeEEECC-----CCHHHHH
Confidence 46777888 56643 4765 67899999999 44443 3221 11 1 33 5777776 5789999
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 042249 210 TYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLE 260 (264)
Q Consensus 210 ~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 260 (264)
++|.++|..+. ++.+++.+++.+.+++ .+...-.++|++.+.+..
T Consensus 435 ~AI~~aL~m~~-~er~~r~~~~~~~v~~-----~~~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 435 SAIKEALNMSD-EERETRHRHNFQYVKT-----HSAQKWADDFMSELNDII 479 (797)
T ss_pred HHHHHHHhCCH-HHHHHHHHHHHHhhhh-----CCHHHHHHHHHHHHHHHh
Confidence 99999998431 2455556666665553 455566677777776654
No 138
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=83.27 E-value=4.6 Score=41.05 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=38.7
Q ss_pred chhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHh
Q 042249 156 WNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLI 216 (264)
Q Consensus 156 ~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll 216 (264)
..++.||+++|+|+|+....+ ....+.+ -..|+.++.. +.+++.++|.+++
T Consensus 657 GLvvLEAMAcGlPVVAT~~GG----~~EiV~d-g~tGfLVdp~-----D~eaLA~aL~~ll 707 (784)
T TIGR02470 657 GLTVLEAMTCGLPTFATRFGG----PLEIIQD-GVSGFHIDPY-----HGEEAAEKIVDFF 707 (784)
T ss_pred CHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEEeCCC-----CHHHHHHHHHHHH
Confidence 358999999999999976543 3344555 5678888764 6789999998876
No 139
>PLN00142 sucrose synthase
Probab=83.09 E-value=4.8 Score=41.05 Aligned_cols=58 Identities=17% Similarity=0.235 Sum_probs=40.1
Q ss_pred ceeec---cCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHh
Q 042249 149 GFLSH---CGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLI 216 (264)
Q Consensus 149 ~~ItH---GG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll 216 (264)
+||.- -|. .++.||+++|+|+|+....+ ....+.+ -..|+.++.. +.+++.++|.+++
T Consensus 669 VfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~d-G~tG~LV~P~-----D~eaLA~aI~~lL 730 (815)
T PLN00142 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVD-GVSGFHIDPY-----HGDEAANKIADFF 730 (815)
T ss_pred EEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEEeCCC-----CHHHHHHHHHHHH
Confidence 56643 344 48999999999999976543 3344555 5578888764 5788888876644
No 140
>PRK14099 glycogen synthase; Provisional
Probab=82.93 E-value=21 Score=34.13 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=45.6
Q ss_pred EecccCCch-hcc-CCCCccceee---ccC-chhHHHHHHhCcceeecCCCc--hHHHHHHHHHh--hcCceeEeeccCC
Q 042249 131 VVPSWAPQI-QVL-SHGSTGGFLS---HCG-WNSVLESIVHGVPIIAWPLYA--EQKMNAVLLTD--DLKVAWRVKVNED 200 (264)
Q Consensus 131 ~i~~~vpq~-~lL-~~~~~~~~It---HGG-~~si~eal~~GvP~l~~P~~~--DQ~~na~~v~~--~~G~G~~l~~~~~ 200 (264)
.+.+|-... .++ +.++ +||. +=| ..+.+||+++|+|.|+....+ |-........+ +-+.|+.+..
T Consensus 354 ~~~G~~~~l~~~~~a~aD--ifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~--- 428 (485)
T PRK14099 354 VVIGYDEALAHLIQAGAD--ALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP--- 428 (485)
T ss_pred EEeCCCHHHHHHHHhcCC--EEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC---
Confidence 455663332 233 3467 6664 233 347799999997767654322 22111100011 0157887766
Q ss_pred CCCCHHHHHHHHHH---HhcCC
Q 042249 201 GLVGREEVATYARG---LIQGE 219 (264)
Q Consensus 201 ~~~~~~~l~~ai~~---ll~~~ 219 (264)
-+.+++.++|.+ +++|+
T Consensus 429 --~d~~~La~ai~~a~~l~~d~ 448 (485)
T PRK14099 429 --VTADALAAALRKTAALFADP 448 (485)
T ss_pred --CCHHHHHHHHHHHHHHhcCH
Confidence 468999999997 55554
No 141
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=80.07 E-value=4.5 Score=35.30 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=59.0
Q ss_pred CcEEEEEecCC---CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCe
Q 042249 54 GSVLFVCFGSG---GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGL 130 (264)
Q Consensus 54 ~~vVyvs~GS~---~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv 130 (264)
++.|.+..|+. ..++.+.+.++++.+.+.+.++++..++.+.+ .-+.+.......++
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~~--------------------~~~~i~~~~~~~~~ 180 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAERE--------------------LAEEIAAALGGPRV 180 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhHH--------------------HHHHHHHhcCCCcc
Confidence 45677777775 34778899999999987788877664432210 01111111101111
Q ss_pred E-eccc--C-CchhccCCCCccceeeccCchhHHHHHHhCcceeec
Q 042249 131 V-VPSW--A-PQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW 172 (264)
Q Consensus 131 ~-i~~~--v-pq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~ 172 (264)
. +.+- + ....++.+++ ++|+.- .|.++=|.+.|+|++++
T Consensus 181 ~~~~~~~~l~e~~~li~~~~--l~I~~D-sg~~HlA~a~~~p~i~l 223 (279)
T cd03789 181 VNLAGKTSLRELAALLARAD--LVVTND-SGPMHLAAALGTPTVAL 223 (279)
T ss_pred ccCcCCCCHHHHHHHHHhCC--EEEeeC-CHHHHHHHHcCCCEEEE
Confidence 1 1111 1 2367888889 999985 36777778999999987
No 142
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=78.88 E-value=9 Score=34.57 Aligned_cols=106 Identities=12% Similarity=0.164 Sum_probs=64.7
Q ss_pred HhhccC-CCCcEEEEEecCC---CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhh
Q 042249 46 KWLDDQ-PNGSVLFVCFGSG---GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGF 121 (264)
Q Consensus 46 ~wl~~~-~~~~vVyvs~GS~---~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 121 (264)
.++... .+++.|.+..|+. -.++.+.+.+++..+...+.++++..++...+. ...+.+
T Consensus 172 ~~l~~~~~~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~------------------~~~~~i 233 (344)
T TIGR02201 172 ALLDEAGVGQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDEL------------------AMVNEI 233 (344)
T ss_pred HHHHhcCCCCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHH------------------HHHHHH
Confidence 345432 2456788888875 347788899999988777778776544321100 011111
Q ss_pred hhhcCCCCeE-ecc--cCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec
Q 042249 122 LDRTKGVGLV-VPS--WAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW 172 (264)
Q Consensus 122 ~~~~~~~nv~-i~~--~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~ 172 (264)
.......+++ +.+ -+++ .+++.+++ +||+. -.|.++=|.+.|+|.|.+
T Consensus 234 ~~~~~~~~~~~l~g~~sL~el~ali~~a~--l~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 234 AQGCQTPRVTSLAGKLTLPQLAALIDHAR--LFIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HhhCCCCcccccCCCCCHHHHHHHHHhCC--EEEec-CCHHHHHHHHcCCCEEEE
Confidence 1111111221 222 2233 67888899 99998 578999999999999986
No 143
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=78.50 E-value=40 Score=28.46 Aligned_cols=80 Identities=19% Similarity=0.243 Sum_probs=51.1
Q ss_pred CCeEecccCC---chhccCCCCccceeec---cCch-hHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 128 VGLVVPSWAP---QIQVLSHGSTGGFLSH---CGWN-SVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 128 ~nv~i~~~vp---q~~lL~~~~~~~~ItH---GG~~-si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
.++.+.+++| ...++..++ +++.- .|.+ ++.||+++|+|+|..... .....+.+ .+.|. +...
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~--~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~-~~~g~-~~~~-- 326 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASAD--VFVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVED-GETGL-LVPP-- 326 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCC--EEEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcC-CCceE-ecCC--
Confidence 4677778888 344666676 55544 3543 469999999999876553 12222233 32466 3322
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 042249 201 GLVGREEVATYARGLIQGE 219 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~ 219 (264)
...+++..++..++.+.
T Consensus 327 --~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 327 --GDVEELADALEQLLEDP 343 (381)
T ss_pred --CCHHHHHHHHHHHhcCH
Confidence 25799999999999874
No 144
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.95 E-value=4.5 Score=36.46 Aligned_cols=84 Identities=17% Similarity=0.127 Sum_probs=50.6
Q ss_pred cCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchH--HHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHH
Q 042249 135 WAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQ--KMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYA 212 (264)
Q Consensus 135 ~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ--~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai 212 (264)
|-...++|.+++ +.|--.|. .+-.++-.|+|+|.+|-.+-| +..|.+=.+-+|+.+.+...+ +..-....
T Consensus 302 qqsfadiLH~ad--aalgmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~-----aq~a~~~~ 373 (412)
T COG4370 302 QQSFADILHAAD--AALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE-----AQAAAQAV 373 (412)
T ss_pred HHHHHHHHHHHH--HHHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc-----hhhHHHHH
Confidence 333345555555 33332221 233467789999999999999 456666666578888876543 23333344
Q ss_pred HHHhcCCchHHHHHHHH
Q 042249 213 RGLIQGEDGKLLRDKMR 229 (264)
Q Consensus 213 ~~ll~~~~~~~~r~~a~ 229 (264)
++++.|+ ++..+++
T Consensus 374 q~ll~dp---~r~~air 387 (412)
T COG4370 374 QELLGDP---QRLTAIR 387 (412)
T ss_pred HHHhcCh---HHHHHHH
Confidence 4489887 5544444
No 145
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=76.91 E-value=10 Score=35.93 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=60.3
Q ss_pred ecccCCch---hccCCCCccceee---ccCc-hhHHHHHHhCcc----eeecCCCchHHHHHHHHHhhcCceeEeeccCC
Q 042249 132 VPSWAPQI---QVLSHGSTGGFLS---HCGW-NSVLESIVHGVP----IIAWPLYAEQKMNAVLLTDDLKVAWRVKVNED 200 (264)
Q Consensus 132 i~~~vpq~---~lL~~~~~~~~It---HGG~-~si~eal~~GvP----~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 200 (264)
+.+++++. .++..++ +||. +-|. .++.||+++|+| +|+--..+-- .. ..-|+.++.
T Consensus 345 ~~g~v~~~el~~~y~~aD--v~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~-------~~-~~~g~lv~p--- 411 (460)
T cd03788 345 LYRSLPREELAALYRAAD--VALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA-------EE-LSGALLVNP--- 411 (460)
T ss_pred EeCCCCHHHHHHHHHhcc--EEEeCccccccCcccceeEEEecCCCceEEEeccccch-------hh-cCCCEEECC---
Confidence 34566654 4577888 5553 3454 477999999999 5544222211 11 223666665
Q ss_pred CCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHH
Q 042249 201 GLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKW 256 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 256 (264)
.+.+++.++|.+++.++. ++.+.+.++..+.+. .-+...-.++++.+|
T Consensus 412 --~d~~~la~ai~~~l~~~~-~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 412 --YDIDEVADAIHRALTMPL-EERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred --CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 468999999999998652 123333333333333 245555556666654
No 146
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=76.89 E-value=22 Score=30.85 Aligned_cols=42 Identities=17% Similarity=0.326 Sum_probs=33.7
Q ss_pred eEecccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCC
Q 042249 130 LVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPL 174 (264)
Q Consensus 130 v~i~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~ 174 (264)
+.+..-++-..+|.+++ .+||-. .++-+||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~--~Vvtin-StvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSD--AVVTIN-STVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCC--EEEEEC-CHHHHHHHHcCCceEEecC
Confidence 33456677889999999 888875 4578999999999999764
No 147
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=76.74 E-value=29 Score=27.88 Aligned_cols=141 Identities=16% Similarity=0.182 Sum_probs=68.9
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecc
Q 042249 55 SVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPS 134 (264)
Q Consensus 55 ~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~ 134 (264)
|.|-|-+||.. +....+++...|++.+..+-..+-.. ...|+.+. .
T Consensus 1 p~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa---------------------HR~p~~l~-----------~ 46 (150)
T PF00731_consen 1 PKVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA---------------------HRTPERLL-----------E 46 (150)
T ss_dssp -EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T---------------------TTSHHHHH-----------H
T ss_pred CeEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec---------------------cCCHHHHH-----------H
Confidence 35777788765 67778888889988886544333221 12344322 2
Q ss_pred cCCchhccCCCCccceeeccCchhHHHHHH---hCcceeecCCCchHHHH----HHHHHhhcCceeEeeccCCCCCCHHH
Q 042249 135 WAPQIQVLSHGSTGGFLSHCGWNSVLESIV---HGVPIIAWPLYAEQKMN----AVLLTDDLKVAWRVKVNEDGLVGREE 207 (264)
Q Consensus 135 ~vpq~~lL~~~~~~~~ItHGG~~si~eal~---~GvP~l~~P~~~DQ~~n----a~~v~~~~G~G~~l~~~~~~~~~~~~ 207 (264)
|+....- ..++ +||.=.|...-+-.+. .-.|+|.+|....+... ...+.--.|+++..-.-+ +..++.-
T Consensus 47 ~~~~~~~-~~~~--viIa~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~-~~~nAA~ 122 (150)
T PF00731_consen 47 FVKEYEA-RGAD--VIIAVAGMSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGIN-NGFNAAL 122 (150)
T ss_dssp HHHHTTT-TTES--EEEEEEESS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SST-HHHHHHH
T ss_pred HHHHhcc-CCCE--EEEEECCCcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEcc-CchHHHH
Confidence 3222111 2234 7888777543333322 36999999987664321 122222235555432211 0133444
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHh
Q 042249 208 VATYARGLIQGEDGKLLRDKMRVLKDAAAN 237 (264)
Q Consensus 208 l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~ 237 (264)
+.-.|-.+ .|+ +++++.+..+++.++
T Consensus 123 ~A~~ILa~-~d~---~l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 123 LAARILAL-KDP---ELREKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHT-T-H---HHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCH---HHHHHHHHHHHHHHc
Confidence 44433333 243 788888888887764
No 148
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=75.28 E-value=6.5 Score=35.17 Aligned_cols=95 Identities=18% Similarity=0.052 Sum_probs=57.6
Q ss_pred CcEEEEEec-CC--CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCe
Q 042249 54 GSVLFVCFG-SG--GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGL 130 (264)
Q Consensus 54 ~~vVyvs~G-S~--~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv 130 (264)
++.|.+..| |. -.++.+.+.+++..+.+.+.++++..+++.+. ...+.+.+.. .++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~-------------------~~~~~i~~~~--~~~ 236 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEE-------------------QRAKRLAEGF--PYV 236 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHH-------------------HHHHHHHccC--Ccc
Confidence 445544444 43 34888899999999977777766544443210 0011111110 122
Q ss_pred Eecc--cCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec
Q 042249 131 VVPS--WAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW 172 (264)
Q Consensus 131 ~i~~--~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~ 172 (264)
.+.+ .+.+ .+++.+++ +||+-- .|.++=|.+.|+|.|++
T Consensus 237 ~l~g~~sL~elaali~~a~--l~I~nD-SGp~HlA~A~g~p~val 278 (322)
T PRK10964 237 EVLPKLSLEQVARVLAGAK--AVVSVD-TGLSHLTAALDRPNITL 278 (322)
T ss_pred eecCCCCHHHHHHHHHhCC--EEEecC-CcHHHHHHHhCCCEEEE
Confidence 2222 2333 67888999 899875 77899999999999987
No 149
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=73.14 E-value=18 Score=32.85 Aligned_cols=99 Identities=7% Similarity=0.065 Sum_probs=61.9
Q ss_pred CCcEEEEEecCC---CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCC
Q 042249 53 NGSVLFVCFGSG---GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVG 129 (264)
Q Consensus 53 ~~~vVyvs~GS~---~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n 129 (264)
+++.|.+..|+. -.++.+.+.+++..|.+.+.++++..++.+.+. ...+.+.+.....+
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~------------------~~~~~i~~~~~~~~ 243 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDL------------------ACVNEIAQGCQTPP 243 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHH------------------HHHHHHHHhcCCCc
Confidence 356788888886 347888999999999877888776654432210 00011111111111
Q ss_pred e-Eeccc--CCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec
Q 042249 130 L-VVPSW--APQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW 172 (264)
Q Consensus 130 v-~i~~~--vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~ 172 (264)
+ -+.+- +.+ .+++.+++ +||+.- .|-++=|.+.|+|.|++
T Consensus 244 ~~~l~g~~sL~el~ali~~a~--l~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 244 VTALAGKTTFPELGALIDHAQ--LFIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred cccccCCCCHHHHHHHHHhCC--EEEecC-CHHHHHHHHcCCCEEEE
Confidence 1 12222 233 67888899 999884 77888899999999876
No 150
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=72.13 E-value=23 Score=31.69 Aligned_cols=96 Identities=10% Similarity=0.129 Sum_probs=59.7
Q ss_pred CCcEEEEEecCC----CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCC
Q 042249 53 NGSVLFVCFGSG----GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGV 128 (264)
Q Consensus 53 ~~~vVyvs~GS~----~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 128 (264)
+++.|.+..|+. -.++.+.+.++++.+.+.+.+++.. +++.+. ...+.+.+... .
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~-------------------~~~~~i~~~~~-~ 231 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDH-------------------PAGNEIEALLP-G 231 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhH-------------------HHHHHHHHhCC-c
Confidence 467888888774 3478889999999887767776655 433220 00111111111 1
Q ss_pred CeE-ecc--cCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec
Q 042249 129 GLV-VPS--WAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW 172 (264)
Q Consensus 129 nv~-i~~--~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~ 172 (264)
++. +.+ -+.+ .+++.+++ +||+.- .|.++=|.+.|+|.|++
T Consensus 232 ~~~~l~g~~sL~el~ali~~a~--l~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 232 ELRNLAGETSLDEAVDLIALAK--AVVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred ccccCCCCCCHHHHHHHHHhCC--EEEeeC-CHHHHHHHHcCCCEEEE
Confidence 111 111 2233 67888889 899874 67888899999999976
No 151
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=71.19 E-value=6.8 Score=33.34 Aligned_cols=99 Identities=10% Similarity=0.086 Sum_probs=53.7
Q ss_pred CCcEEEEEecCCC---CCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCC
Q 042249 53 NGSVLFVCFGSGG---SLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVG 129 (264)
Q Consensus 53 ~~~vVyvs~GS~~---~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n 129 (264)
+++.|.+..|+.. .++.+.+.+++..+.+.+..++...++.+.+. ..-+.+........
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~------------------~~~~~~~~~~~~~~ 165 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEK------------------EIADQIAAGLQNPV 165 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHH------------------HHHHHHHTTHTTTT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHH------------------HHHHHHHHhcccce
Confidence 5678888888863 47788899999999888866655443322000 00001111111112
Q ss_pred eEeccc--CCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec
Q 042249 130 LVVPSW--APQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW 172 (264)
Q Consensus 130 v~i~~~--vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~ 172 (264)
+.+.+- +.+ .+++.+++ ++|+.- .|.++=|.+.|+|+|++
T Consensus 166 ~~~~~~~~l~e~~ali~~a~--~~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 166 INLAGKTSLRELAALISRAD--LVIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp EEETTTS-HHHHHHHHHTSS--EEEEES-SHHHHHHHHTT--EEEE
T ss_pred EeecCCCCHHHHHHHHhcCC--EEEecC-ChHHHHHHHHhCCEEEE
Confidence 223222 223 57888888 888874 67889999999999998
No 152
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=70.31 E-value=1.1e+02 Score=29.60 Aligned_cols=109 Identities=11% Similarity=-0.009 Sum_probs=70.4
Q ss_pred eEecccCCchh---ccCCCCccceee--ccCchhH-HHHHHhCc----ceeecCCCchHHHHHHHHHhhcCceeEeeccC
Q 042249 130 LVVPSWAPQIQ---VLSHGSTGGFLS--HCGWNSV-LESIVHGV----PIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNE 199 (264)
Q Consensus 130 v~i~~~vpq~~---lL~~~~~~~~It--HGG~~si-~eal~~Gv----P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 199 (264)
+.+.+.+|... ++..+++ ++|| .-|+|.+ .|.++++. |+|+--+.+= ... +.-++.+++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGa-------a~~-l~~AllVNP-- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGA-------AVE-LKGALLTNP-- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEeccccc-------hhh-cCCCEEECC--
Confidence 44566777654 5666774 3443 4588855 69999987 5555433221 133 555777776
Q ss_pred CCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHh
Q 042249 200 DGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKN 258 (264)
Q Consensus 200 ~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 258 (264)
.+.+++.++|.+.|..+. ++-++|.+++.+.++. ..+..=.++|+++|..
T Consensus 433 ---~d~~~~A~ai~~AL~m~~-~Er~~R~~~l~~~v~~-----~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 433 ---YDPVRMDETIYVALAMPK-AEQQARMREMFDAVNY-----YDVQRWADEFLAAVSP 482 (487)
T ss_pred ---CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhhh
Confidence 679999999999998753 3456666666666653 3455556677777654
No 153
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=68.68 E-value=49 Score=30.44 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=60.6
Q ss_pred CCeE-ecccCC---chhccCCCCccceeec--cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCC
Q 042249 128 VGLV-VPSWAP---QIQVLSHGSTGGFLSH--CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDG 201 (264)
Q Consensus 128 ~nv~-i~~~vp---q~~lL~~~~~~~~ItH--GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 201 (264)
.++. +.+++| +..+|..|+++.|.+. =|.|++.-.+..|+|+++- .+-+.+ ..+.+ .|+-+....++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~-~~l~~-~~ipVlf~~d~-- 317 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFW-QDLKE-QGIPVLFYGDE-- 317 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHH-HHHHh-CCCeEEecccc--
Confidence 3554 356776 4679999998887775 5799999999999999875 233333 34566 67766666565
Q ss_pred CCCHHHHHHHHHHHhc
Q 042249 202 LVGREEVATYARGLIQ 217 (264)
Q Consensus 202 ~~~~~~l~~ai~~ll~ 217 (264)
++...|+++=+++..
T Consensus 318 -L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 318 -LDEALVREAQRQLAN 332 (360)
T ss_pred -CCHHHHHHHHHHHhh
Confidence 899999999988875
No 154
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=68.10 E-value=16 Score=33.07 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=60.0
Q ss_pred CCcEEEEEecCC----CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCC
Q 042249 53 NGSVLFVCFGSG----GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGV 128 (264)
Q Consensus 53 ~~~vVyvs~GS~----~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 128 (264)
+++.|.+..|+. -.++.+.+.++++.+...+.++++..++.+.+ ..+.+.......
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~--------------------~~~~i~~~~~~~ 238 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHE--------------------AGNEILAALNTE 238 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHH--------------------HHHHHHHhcccc
Confidence 567888888874 34788889999998876677766553332210 011111111100
Q ss_pred ---C-eEeccc--CCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec
Q 042249 129 ---G-LVVPSW--APQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW 172 (264)
Q Consensus 129 ---n-v~i~~~--vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~ 172 (264)
+ +-+.+- +.+ .+++.+++ +||+.- .|-++=|.+.|+|.|.+
T Consensus 239 ~~~~~~~l~g~~sL~el~ali~~a~--l~I~nD-TGp~HlAaA~g~P~val 286 (348)
T PRK10916 239 QQAWCRNLAGETQLEQAVILIAACK--AIVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_pred cccceeeccCCCCHHHHHHHHHhCC--EEEecC-ChHHHHHHHhCCCEEEE
Confidence 1 112221 233 56888899 899874 78899999999999876
No 155
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=67.82 E-value=6.1 Score=36.00 Aligned_cols=99 Identities=11% Similarity=0.160 Sum_probs=59.4
Q ss_pred CCeEec-ccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCC--CCC
Q 042249 128 VGLVVP-SWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDG--LVG 204 (264)
Q Consensus 128 ~nv~i~-~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~--~~~ 204 (264)
.++... ...+...+|..++ +.||-- .+.+.|.+..++|+|......|.+.. . .|.-......--| .-+
T Consensus 252 ~~i~~~~~~~~~~~ll~~aD--iLITDy-SSi~fD~~~l~KPiify~~D~~~Y~~-----~-rg~~~~~~~~~pg~~~~~ 322 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAAD--ILITDY-SSIIFDFLLLNKPIIFYQPDLEEYEK-----E-RGFYFDYEEDLPGPIVYN 322 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-S--EEEESS--THHHHHGGGT--EEEE-TTTTTTTT-----T-SSBSS-TTTSSSS-EESS
T ss_pred CcEEECCCCCCHHHHHHhcC--EEEEec-hhHHHHHHHhCCCEEEEeccHHHHhh-----c-cCCCCchHhhCCCceeCC
Confidence 355543 4456788999999 899987 55889999999999998876665522 1 2322221100000 136
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHh
Q 042249 205 REEVATYARGLIQGEDGKLLRDKMRVLKDAAAN 237 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~ 237 (264)
.++|.++|+.++.++ ..++++.++..+.+-.
T Consensus 323 ~~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~ 353 (369)
T PF04464_consen 323 FEELIEAIENIIENP--DEYKEKREKFRDKFFK 353 (369)
T ss_dssp HHHHHHHHTTHHHHH--HHTHHHHHHHHHHHST
T ss_pred HHHHHHHHHhhhhCC--HHHHHHHHHHHHHhCC
Confidence 799999999988754 3566666777777654
No 156
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=66.89 E-value=8.9 Score=35.03 Aligned_cols=97 Identities=13% Similarity=0.154 Sum_probs=55.3
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCCh-hhhh-hcCCCCeE-
Q 042249 55 SVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPK-GFLD-RTKGVGLV- 131 (264)
Q Consensus 55 ~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-~~~~-~~~~~nv~- 131 (264)
.+++.+.||.+...+.. .+++.|++.++.++|+......+ . ..+|+ ++.- .+...++.
T Consensus 3 ~i~~~~GGTGGHi~Pal--a~a~~l~~~g~~v~~vg~~~~~e---~--------------~l~~~~g~~~~~~~~~~l~~ 63 (352)
T PRK12446 3 KIVFTGGGSAGHVTPNL--AIIPYLKEDNWDISYIGSHQGIE---K--------------TIIEKENIPYYSISSGKLRR 63 (352)
T ss_pred eEEEEcCCcHHHHHHHH--HHHHHHHhCCCEEEEEECCCccc---c--------------ccCcccCCcEEEEeccCcCC
Confidence 47888888887655532 45677777789999997554321 0 11111 1100 00000000
Q ss_pred -------------ecccCCchhccC--CCCccceeeccCchh---HHHHHHhCcceeec
Q 042249 132 -------------VPSWAPQIQVLS--HGSTGGFLSHCGWNS---VLESIVHGVPIIAW 172 (264)
Q Consensus 132 -------------i~~~vpq~~lL~--~~~~~~~ItHGG~~s---i~eal~~GvP~l~~ 172 (264)
+..+.--..++. +|+ ++|++||.-| +..|...|+|.++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~i~~~~kPd--vvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 64 YFDLKNIKDPFLVMKGVMDAYVRIRKLKPD--VIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhcCCC--EEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 001111122344 356 9999999986 89999999999874
No 157
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=66.69 E-value=35 Score=28.56 Aligned_cols=102 Identities=8% Similarity=-0.060 Sum_probs=53.7
Q ss_pred eEecccCCchhccCCCCccceeeccCchhHHHHHH----hCcceeecCCCchHHHHHHH-----HHhhcCceeEeeccCC
Q 042249 130 LVVPSWAPQIQVLSHGSTGGFLSHCGWNSVLESIV----HGVPIIAWPLYAEQKMNAVL-----LTDDLKVAWRVKVNED 200 (264)
Q Consensus 130 v~i~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~----~GvP~l~~P~~~DQ~~na~~-----v~~~~G~G~~l~~~~~ 200 (264)
+.+.....+..-+..++ ++|.--+.-.+.+.++ .++++-+ .|.+..+.. +.. -++-+.+..+..
T Consensus 56 i~~~~~~~~~~~l~~ad--lViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~-g~l~iaIsT~G~ 128 (202)
T PRK06718 56 IRWKQKEFEPSDIVDAF--LVIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHR-GKLTISVSTDGA 128 (202)
T ss_pred EEEEecCCChhhcCCce--EEEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEc-CCeEEEEECCCC
Confidence 44433344455567777 6777666666655554 3443322 344333321 222 223333333221
Q ss_pred CCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhc
Q 042249 201 GLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANAL 239 (264)
Q Consensus 201 ~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~ 239 (264)
+..-+..|++.|+.++. ++-..+-+.+.++++.+++.+
T Consensus 129 sP~la~~lr~~ie~~~~-~~~~~~~~~~~~~R~~~k~~~ 166 (202)
T PRK06718 129 SPKLAKKIRDELEALYD-ESYESYIDFLYECRQKIKELQ 166 (202)
T ss_pred ChHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHHHhC
Confidence 12335678888888773 333467777778888777643
No 158
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=66.37 E-value=13 Score=37.43 Aligned_cols=111 Identities=13% Similarity=0.024 Sum_probs=65.6
Q ss_pred ecccCCch---hccCCCCccceeec---cCc-hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 132 VPSWAPQI---QVLSHGSTGGFLSH---CGW-NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 132 i~~~vpq~---~lL~~~~~~~~ItH---GG~-~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
+.+++++. +++..++ +|+.- -|. .++.||+++|+|-...|+..+- +--..+ +.-|+.+++ .+
T Consensus 346 ~~~~~~~~~l~~ly~~aD--v~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~---~G~~~~-l~~~llv~P-----~d 414 (726)
T PRK14501 346 FYRSLPFEELVALYRAAD--VALVTPLRDGMNLVAKEYVASRTDGDGVLILSEM---AGAAAE-LAEALLVNP-----ND 414 (726)
T ss_pred EeCCCCHHHHHHHHHhcc--EEEecccccccCcccceEEEEcCCCCceEEEecc---cchhHH-hCcCeEECC-----CC
Confidence 44567764 4677788 55543 354 4779999997752222221111 000112 333777766 57
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhh
Q 042249 205 REEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNL 259 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~ 259 (264)
.+++.++|.+++..+. .+.+++.+++.+.++ ..+...-.+++++.+.+.
T Consensus 415 ~~~la~ai~~~l~~~~-~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 415 IEGIAAAIKRALEMPE-EEQRERMQAMQERLR-----RYDVHKWASDFLDELREA 463 (726)
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHH
Confidence 8999999999998642 244445555555443 356666777777777765
No 159
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=65.33 E-value=15 Score=32.36 Aligned_cols=53 Identities=13% Similarity=0.077 Sum_probs=38.4
Q ss_pred CCCccceeeccCchhHHHHHH------hCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhc
Q 042249 144 HGSTGGFLSHCGWNSVLESIV------HGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQ 217 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~------~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~ 217 (264)
.++ ++|+-||-||++.|+. .++|++++.. =.+|+.- + ++++++.+.++++++
T Consensus 35 ~~D--lvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~--------------G~lGFL~---~---~~~~~~~~~l~~i~~ 92 (265)
T PRK04885 35 NPD--IVISVGGDGTLLSAFHRYENQLDKVRFVGVHT--------------GHLGFYT---D---WRPFEVDKLVIALAK 92 (265)
T ss_pred CCC--EEEEECCcHHHHHHHHHhcccCCCCeEEEEeC--------------CCceecc---c---CCHHHHHHHHHHHHc
Confidence 456 9999999999999986 4789888743 1233322 1 567888888888887
Q ss_pred C
Q 042249 218 G 218 (264)
Q Consensus 218 ~ 218 (264)
+
T Consensus 93 g 93 (265)
T PRK04885 93 D 93 (265)
T ss_pred C
Confidence 5
No 160
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=64.16 E-value=45 Score=30.19 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=56.1
Q ss_pred CeE-ecccCC---chhccCCCCccceeec--cCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCC
Q 042249 129 GLV-VPSWAP---QIQVLSHGSTGGFLSH--CGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGL 202 (264)
Q Consensus 129 nv~-i~~~vp---q~~lL~~~~~~~~ItH--GG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 202 (264)
++. +.+++| +.++|+.|+++.|+++ =|.||+.-.++.|+|+++-- +-+.+.. +.+ .|+-+..+.++
T Consensus 207 ~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l~e-~gv~Vlf~~d~--- 278 (322)
T PRK02797 207 NFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-LTE-QGLPVLFTGDD--- 278 (322)
T ss_pred cEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-HHh-CCCeEEecCCc---
Confidence 444 345665 5789999999888886 47899999999999999853 3344443 455 67776656655
Q ss_pred CCHHHHHHHHHHHh
Q 042249 203 VGREEVATYARGLI 216 (264)
Q Consensus 203 ~~~~~l~~ai~~ll 216 (264)
++...++++=+++.
T Consensus 279 L~~~~v~e~~rql~ 292 (322)
T PRK02797 279 LDEDIVREAQRQLA 292 (322)
T ss_pred ccHHHHHHHHHHHH
Confidence 77777777655543
No 161
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=62.67 E-value=86 Score=27.92 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=29.6
Q ss_pred ccCCchhccCCCCccceeeccC-chhHHHHHHhCcceeec
Q 042249 134 SWAPQIQVLSHGSTGGFLSHCG-WNSVLESIVHGVPIIAW 172 (264)
Q Consensus 134 ~~vpq~~lL~~~~~~~~ItHGG-~~si~eal~~GvP~l~~ 172 (264)
++-|+.+.|+.++ .+|.-.. .+-..||.+.|+|+-++
T Consensus 234 g~NPY~~~La~Ad--yii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 234 GYNPYIDMLAAAD--YIISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCchHHHHhhcc--eEEEecchhhhhHHHhccCCCeEEE
Confidence 4568999999998 6665554 67789999999998764
No 162
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=62.25 E-value=7.6 Score=31.72 Aligned_cols=31 Identities=19% Similarity=0.395 Sum_probs=21.3
Q ss_pred CCccceeeccCchhHHHHHHhCcceeecCCCc
Q 042249 145 GSTGGFLSHCGWNSVLESIVHGVPIIAWPLYA 176 (264)
Q Consensus 145 ~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~ 176 (264)
..+.++|++||...+..... ++|+|-+|...
T Consensus 33 ~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 33 EGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred cCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 33449999999988888877 99999999855
No 163
>PLN02929 NADH kinase
Probab=61.17 E-value=12 Score=33.66 Aligned_cols=67 Identities=9% Similarity=0.085 Sum_probs=44.1
Q ss_pred CCCCccceeeccCchhHHHHHH---hCcceeecCCCc------hHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHH
Q 042249 143 SHGSTGGFLSHCGWNSVLESIV---HGVPIIAWPLYA------EQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYAR 213 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~---~GvP~l~~P~~~------DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~ 213 (264)
..++ ++|+-||-||++.|.. .++|++++-... .+++|.-. +. .-+|.... ++.+++.+++.
T Consensus 63 ~~~D--lvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~-r~lGfL~~------~~~~~~~~~L~ 132 (301)
T PLN02929 63 RDVD--LVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-AR-RSTGHLCA------ATAEDFEQVLD 132 (301)
T ss_pred CCCC--EEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-cc-cCcccccc------CCHHHHHHHHH
Confidence 3457 9999999999999855 368988876532 12222211 11 22554433 56799999999
Q ss_pred HHhcCC
Q 042249 214 GLIQGE 219 (264)
Q Consensus 214 ~ll~~~ 219 (264)
+++++.
T Consensus 133 ~il~g~ 138 (301)
T PLN02929 133 DVLFGR 138 (301)
T ss_pred HHHcCC
Confidence 999763
No 164
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=60.21 E-value=72 Score=28.52 Aligned_cols=54 Identities=13% Similarity=0.183 Sum_probs=39.1
Q ss_pred CCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCC
Q 042249 144 HGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
.++ ++|+=||-||+++++.. ++|++++... .+|+.. + ++.+++.++|.++++++
T Consensus 62 ~~d--~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl~---~---~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 62 VCD--LVIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFLT---D---IRPDELEFKLAEVLDGH 119 (295)
T ss_pred CCC--EEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------cccccc---c---CCHHHHHHHHHHHHcCC
Confidence 456 89999999999998753 6788887541 123221 1 67899999999998753
No 165
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=59.83 E-value=22 Score=31.67 Aligned_cols=55 Identities=11% Similarity=0.165 Sum_probs=38.5
Q ss_pred CCCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 143 SHGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
..++ ++|+-||-||++.++.. ++|++++-. =.+|..- + ++.+++.+++++++.+
T Consensus 63 ~~~D--lvi~iGGDGT~L~aa~~~~~~~~PilGIN~--------------G~lGFLt---~---~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 63 KISD--FLISLGGDGTLISLCRKAAEYDKFVLGIHA--------------GHLGFLT---D---ITVDEAEKFFQAFFQG 120 (287)
T ss_pred cCCC--EEEEECCCHHHHHHHHHhcCCCCcEEEEeC--------------CCcccCC---c---CCHHHHHHHHHHHHcC
Confidence 4567 99999999999988663 678887632 1123221 1 5678888888888875
Q ss_pred C
Q 042249 219 E 219 (264)
Q Consensus 219 ~ 219 (264)
+
T Consensus 121 ~ 121 (287)
T PRK14077 121 E 121 (287)
T ss_pred C
Confidence 3
No 166
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=58.94 E-value=14 Score=36.42 Aligned_cols=94 Identities=19% Similarity=0.172 Sum_probs=51.1
Q ss_pred CchhccCCCCccceeeccC-c-hhHHHHHHhCcceeecCCCc-hHHHHHH--HHHhhcCceeEeeccCCCCCCHHHHHHH
Q 042249 137 PQIQVLSHGSTGGFLSHCG-W-NSVLESIVHGVPIIAWPLYA-EQKMNAV--LLTDDLKVAWRVKVNEDGLVGREEVATY 211 (264)
Q Consensus 137 pq~~lL~~~~~~~~ItHGG-~-~si~eal~~GvP~l~~P~~~-DQ~~na~--~v~~~~G~G~~l~~~~~~~~~~~~l~~a 211 (264)
++.+++..|+.++|-+-=- | =|-+||+++|||.|+-=+.+ -++.+-. .-.. .|+-+.-+.. -+.++..+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~-~GV~VvdR~~----~n~~e~v~~ 536 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEE-YGVYVVDRRD----KNYDESVNQ 536 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGG-GTEEEE-SSS----S-HHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcC-CcEEEEeCCC----CCHHHHHHH
Confidence 5567777788777776211 2 48899999999999988744 2232211 1123 4554444443 466666666
Q ss_pred HHHHhc-----CC-chHHHHHHHHHHHHHH
Q 042249 212 ARGLIQ-----GE-DGKLLRDKMRVLKDAA 235 (264)
Q Consensus 212 i~~ll~-----~~-~~~~~r~~a~~l~~~~ 235 (264)
|...|. +. +...+|+++++|++.+
T Consensus 537 la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 537 LADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 665553 11 2345777777777653
No 167
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=58.72 E-value=25 Score=31.36 Aligned_cols=55 Identities=13% Similarity=0.183 Sum_probs=39.3
Q ss_pred CCCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 143 SHGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
..++ ++|+-||-||+++++.. ++|++++-. =.+|+... ++.+++.++|.+++.+
T Consensus 62 ~~~d--~vi~~GGDGt~l~~~~~~~~~~~pilGIn~--------------G~lGFL~~------~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 62 ARAD--LAVVLGGDGTMLGIGRQLAPYGVPLIGINH--------------GRLGFITD------IPLDDMQETLPPMLAG 119 (291)
T ss_pred cCCC--EEEEECCcHHHHHHHHHhcCCCCCEEEEcC--------------CCcccccc------CCHHHHHHHHHHHHcC
Confidence 3467 99999999999999774 678887642 12333331 5678888888888875
Q ss_pred C
Q 042249 219 E 219 (264)
Q Consensus 219 ~ 219 (264)
+
T Consensus 120 ~ 120 (291)
T PRK02155 120 N 120 (291)
T ss_pred C
Confidence 3
No 168
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.64 E-value=66 Score=26.31 Aligned_cols=75 Identities=11% Similarity=0.163 Sum_probs=52.4
Q ss_pred hhHHHHHHhCcceeecCCC--chHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 042249 157 NSVLESIVHGVPIIAWPLY--AEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDA 234 (264)
Q Consensus 157 ~si~eal~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~ 234 (264)
-|..|--.+|.=.+. |.- .=+..|+...++ .|.=..+--.. .+.+.|..+.++=|.|++.++++..+.++.+.
T Consensus 88 ~S~~EQasAGLd~Ls-~~E~a~f~~LN~aY~~r-FgfPfI~aVkg---~~k~~Il~a~~~Rl~n~~e~E~~tAl~eI~rI 162 (176)
T COG3195 88 ESTSEQASAGLDRLS-PEEFARFTELNAAYVER-FGFPFIIAVKG---NTKDTILAAFERRLDNDREQEFATALAEIERI 162 (176)
T ss_pred hhHHHHHhcCcccCC-HHHHHHHHHHHHHHHHh-cCCceEEeecC---CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 355555555543332 111 114679999999 99887775543 68999999999999888777888888887776
Q ss_pred HH
Q 042249 235 AA 236 (264)
Q Consensus 235 ~~ 236 (264)
++
T Consensus 163 A~ 164 (176)
T COG3195 163 AL 164 (176)
T ss_pred HH
Confidence 54
No 169
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=56.99 E-value=30 Score=31.19 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=40.5
Q ss_pred CCCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 143 SHGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
..++ ++|+=||-||++.|... ++|++++.. =.+|+... +..+++.+++++++.+
T Consensus 71 ~~~D--~vi~lGGDGT~L~aar~~~~~~~PilGIN~--------------G~lGFL~~------~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 71 DGCE--LVLVLGGDGTILRAAELARAADVPVLGVNL--------------GHVGFLAE------AEAEDLDEAVERVVDR 128 (306)
T ss_pred cCCC--EEEEEcCCHHHHHHHHHhccCCCcEEEEec--------------CCCceecc------CCHHHHHHHHHHHHcC
Confidence 4567 99999999999998764 789888754 12343332 5678888999999876
Q ss_pred C
Q 042249 219 E 219 (264)
Q Consensus 219 ~ 219 (264)
.
T Consensus 129 ~ 129 (306)
T PRK03372 129 D 129 (306)
T ss_pred C
Confidence 3
No 170
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=54.93 E-value=28 Score=31.34 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 143 SHGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
..++ ++|+=||-||++.|... ++|++++-. =.+|+.-. ++.+++.+++++++++
T Consensus 67 ~~~D--lvi~iGGDGTlL~aar~~~~~~iPilGIN~--------------G~lGFLt~------~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 67 SSMK--FAIVLGGDGTVLSAARQLAPCGIPLLTINT--------------GHLGFLTE------AYLNQLDEAIDQVLAG 124 (305)
T ss_pred cCcC--EEEEEeCcHHHHHHHHHhcCCCCcEEEEeC--------------CCCccccc------CCHHHHHHHHHHHHcC
Confidence 3467 99999999999999774 788888732 11232221 5678899999999876
Q ss_pred C
Q 042249 219 E 219 (264)
Q Consensus 219 ~ 219 (264)
+
T Consensus 125 ~ 125 (305)
T PRK02649 125 Q 125 (305)
T ss_pred C
Confidence 3
No 171
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=53.93 E-value=33 Score=30.96 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=58.6
Q ss_pred CcEEEEEec-CC---CCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCC
Q 042249 54 GSVLFVCFG-SG---GSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVG 129 (264)
Q Consensus 54 ~~vVyvs~G-S~---~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n 129 (264)
++.|.++.| |. -.++.+.+.++++.+.+.+..+++..+. .+. + ..+.+..... +
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~-~e~---------------e----~~~~i~~~~~--~ 232 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP-DEE---------------E----RAEEIAKGLP--N 232 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh-HHH---------------H----HHHHHHHhcC--C
Confidence 678999888 43 3588899999999999988665554433 220 0 0111111111 1
Q ss_pred eE-ecc--cCCc-hhccCCCCccceeeccCchhHHHHHHhCcceeec
Q 042249 130 LV-VPS--WAPQ-IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAW 172 (264)
Q Consensus 130 v~-i~~--~vpq-~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~ 172 (264)
.. +.+ -+.+ .+++.+++ +||+. -.|-++=|.+.|+|.|++
T Consensus 233 ~~~l~~k~sL~e~~~li~~a~--l~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 233 AVILAGKTSLEELAALIAGAD--LVIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred ccccCCCCCHHHHHHHHhcCC--EEEcc-CChHHHHHHHcCCCEEEE
Confidence 11 112 2233 56777888 78876 467888899999999987
No 172
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=53.44 E-value=30 Score=30.88 Aligned_cols=56 Identities=18% Similarity=0.283 Sum_probs=40.1
Q ss_pred cCCCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhc
Q 042249 142 LSHGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQ 217 (264)
Q Consensus 142 L~~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~ 217 (264)
...++ ++|+=||-||++.++.. ++|++++-. =.+|+.-. ++++++.++++++++
T Consensus 62 ~~~~d--lvi~lGGDGT~L~aa~~~~~~~~PilGIN~--------------G~lGFLt~------~~~~~~~~~l~~i~~ 119 (292)
T PRK01911 62 DGSAD--MVISIGGDGTFLRTATYVGNSNIPILGINT--------------GRLGFLAT------VSKEEIEETIDELLN 119 (292)
T ss_pred ccCCC--EEEEECCcHHHHHHHHHhcCCCCCEEEEec--------------CCCCcccc------cCHHHHHHHHHHHHc
Confidence 34567 99999999999998773 688888643 11232221 567889999999987
Q ss_pred CC
Q 042249 218 GE 219 (264)
Q Consensus 218 ~~ 219 (264)
+.
T Consensus 120 g~ 121 (292)
T PRK01911 120 GD 121 (292)
T ss_pred CC
Confidence 63
No 173
>PLN02470 acetolactate synthase
Probab=52.49 E-value=28 Score=34.10 Aligned_cols=28 Identities=18% Similarity=0.432 Sum_probs=22.8
Q ss_pred CccceeeccCc------hhHHHHHHhCcceeecC
Q 042249 146 STGGFLSHCGW------NSVLESIVHGVPIIAWP 173 (264)
Q Consensus 146 ~~~~~ItHGG~------~si~eal~~GvP~l~~P 173 (264)
..+++++|.|- +.+.+|...++|||++.
T Consensus 76 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 76 KVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 34488888884 47799999999999995
No 174
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=52.09 E-value=36 Score=30.48 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=39.9
Q ss_pred CCCCccceeeccCchhHHHHHH----hCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 143 SHGSTGGFLSHCGWNSVLESIV----HGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~----~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
..++ ++|+=||-||++.|.. .++|++++-. =.+|+.-. ++.+++.+++++++.+
T Consensus 67 ~~~D--~vi~lGGDGT~L~aa~~~~~~~~PilGIN~--------------G~lGFL~~------~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 67 QYCD--LVAVLGGDGTFLSVAREIAPRAVPIIGINQ--------------GHLGFLTQ------IPREYMTDKLLPVLEG 124 (296)
T ss_pred cCCC--EEEEECCcHHHHHHHHHhcccCCCEEEEec--------------CCCeEeec------cCHHHHHHHHHHHHcC
Confidence 3567 9999999999999875 3789888732 11344332 5678899999999875
No 175
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=51.41 E-value=42 Score=32.43 Aligned_cols=55 Identities=11% Similarity=0.177 Sum_probs=39.9
Q ss_pred CCCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 143 SHGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
..++ ++|+=||-||++.|... ++|++++-+ -.+|+.- + ++.+++.++|.+++.+
T Consensus 261 ~~~D--lVIsiGGDGTlL~Aar~~~~~~iPILGIN~--------------G~LGFLt---~---i~~~e~~~~Le~il~G 318 (508)
T PLN02935 261 TKVD--LVITLGGDGTVLWAASMFKGPVPPVVPFSM--------------GSLGFMT---P---FHSEQYRDCLDAILKG 318 (508)
T ss_pred cCCC--EEEEECCcHHHHHHHHHhccCCCcEEEEeC--------------CCcceec---c---cCHHHHHHHHHHHHcC
Confidence 3467 99999999999999774 467777621 1245432 1 6789999999999876
Q ss_pred C
Q 042249 219 E 219 (264)
Q Consensus 219 ~ 219 (264)
+
T Consensus 319 ~ 319 (508)
T PLN02935 319 P 319 (508)
T ss_pred C
Confidence 4
No 176
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=50.94 E-value=33 Score=30.64 Aligned_cols=55 Identities=7% Similarity=0.104 Sum_probs=38.9
Q ss_pred CCCCccceeeccCchhHHHHHH----hCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 143 SHGSTGGFLSHCGWNSVLESIV----HGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~----~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
..++ ++|+=||-||++.++. +++|++.+-. =.+|+.-. ++++++.+++++++++
T Consensus 62 ~~~d--~vi~lGGDGT~L~aa~~~~~~~~Pilgin~--------------G~lGFl~~------~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 62 QQAD--LAIVVGGDGNMLGAARVLARYDIKVIGINR--------------GNLGFLTD------LDPDNALQQLSDVLEG 119 (292)
T ss_pred CCCC--EEEEECCcHHHHHHHHHhcCCCCeEEEEEC--------------CCCCcccc------cCHHHHHHHHHHHHcC
Confidence 4567 9999999999999975 3678777633 11233221 5678899999999875
Q ss_pred C
Q 042249 219 E 219 (264)
Q Consensus 219 ~ 219 (264)
.
T Consensus 120 ~ 120 (292)
T PRK03378 120 H 120 (292)
T ss_pred C
Confidence 3
No 177
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=49.33 E-value=77 Score=23.13 Aligned_cols=56 Identities=20% Similarity=0.240 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcC-CCCChHHHHHHHHHHHHhhhccCC
Q 042249 206 EEVATYARGLIQGEDGKLLRDKMRVLKDAAANALS-PDGFSTKSLANVAQKWKNLENDTN 264 (264)
Q Consensus 206 ~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~-~gg~~~~~~~~~~~~~~~~~~~~~ 264 (264)
.++...+.++++|. ..-+|.++.++.+..+.. +|.+..-....-+.-|+..-||-|
T Consensus 16 ~q~~~lL~~Ii~Dt---tVPRNIRraA~~a~e~L~~e~e~p~vRaAtaIsiLeeisnDPN 72 (93)
T COG1698 16 NQVMQLLDEIIQDT---TVPRNIRRAAEEAKEALNNEGESPAVRAATAISILEEISNDPN 72 (93)
T ss_pred HHHHHHHHHHHccc---cccHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHhcCCC
Confidence 34445566667775 444555555544444333 466666666666666666656544
No 178
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=48.38 E-value=33 Score=30.38 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=36.4
Q ss_pred CCCccceeeccCchhHHHHHH---hCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 144 HGSTGGFLSHCGWNSVLESIV---HGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~---~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
.++ ++|.-||-||+++++. .++|++++|... +|..- + +.++++.+++.+++++
T Consensus 57 ~~d--~vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~--------------lGFl~---~---~~~~~~~~~l~~i~~g 112 (277)
T PRK03708 57 DVD--FIIAIGGDGTILRIEHKTKKDIPILGINMGT--------------LGFLT---E---VEPEETFFALSRLLEG 112 (277)
T ss_pred CCC--EEEEEeCcHHHHHHHHhcCCCCeEEEEeCCC--------------CCccc---c---CCHHHHHHHHHHHHcC
Confidence 456 9999999999999884 356888876521 12211 1 4567788888888765
No 179
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=48.19 E-value=8.8 Score=36.83 Aligned_cols=63 Identities=16% Similarity=0.113 Sum_probs=39.0
Q ss_pred hhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 042249 157 NSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRV 230 (264)
Q Consensus 157 ~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~ 230 (264)
-++.||+++|.|+++.=-.+ =+.-++. .-.|..+++.. -....+..++.++..|+ +++.++.+
T Consensus 380 iv~IEAMa~glPvvAt~~GG----P~EiV~~-~~tG~l~dp~~---e~~~~~a~~~~kl~~~p---~l~~~~~~ 442 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATNNGG----PAEIVVH-GVTGLLIDPGQ---EAVAELADALLKLRRDP---ELWARMGK 442 (495)
T ss_pred ceeHHHHhcCCCEEEecCCC----ceEEEEc-CCcceeeCCch---HHHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 37899999999999862211 1112222 33455555432 23347999999999988 55555443
No 180
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=47.25 E-value=44 Score=27.17 Aligned_cols=29 Identities=21% Similarity=0.215 Sum_probs=24.3
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhcCC
Q 042249 56 VLFVCFGSGGSLSQKQLNELALGLEMSGQ 84 (264)
Q Consensus 56 vVyvs~GS~~~~~~~~~~~l~~al~~~~~ 84 (264)
.+|+++||-.......+...+.+|.+.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~ 31 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALAD 31 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCC
Confidence 69999999887677788888888888775
No 181
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=47.16 E-value=51 Score=29.16 Aligned_cols=57 Identities=7% Similarity=0.057 Sum_probs=39.0
Q ss_pred hhccCCCCccceeeccCchhHHHHHH----hCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHH
Q 042249 139 IQVLSHGSTGGFLSHCGWNSVLESIV----HGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARG 214 (264)
Q Consensus 139 ~~lL~~~~~~~~ItHGG~~si~eal~----~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ 214 (264)
..+...++ ++|+=||-||++.|+. .++|++++-. -.+|+... ++++++.+.+.+
T Consensus 37 ~~~~~~~d--~vi~iGGDGT~L~aa~~~~~~~~PilgIn~--------------G~lGFL~~------~~~~~~~~~l~~ 94 (272)
T PRK02231 37 EEIGQRAQ--LAIVIGGDGNMLGRARVLAKYDIPLIGINR--------------GNLGFLTD------IDPKNAYEQLEA 94 (272)
T ss_pred HHhCcCCC--EEEEECCcHHHHHHHHHhccCCCcEEEEeC--------------CCCccccc------CCHHHHHHHHHH
Confidence 34444567 9999999999998755 3678888643 12343332 567778888888
Q ss_pred Hhc
Q 042249 215 LIQ 217 (264)
Q Consensus 215 ll~ 217 (264)
++.
T Consensus 95 ~~~ 97 (272)
T PRK02231 95 CLE 97 (272)
T ss_pred HHh
Confidence 776
No 182
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=45.56 E-value=73 Score=24.84 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=32.0
Q ss_pred hccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeC
Q 042249 48 LDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKC 92 (264)
Q Consensus 48 l~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~ 92 (264)
++......+|++++||-.....+.+.+++..+. .+.+++++...
T Consensus 45 ~~~~~~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 45 KDSGKLRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred HHcCCCCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 333334569999999998777888888888874 35777776543
No 183
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=44.57 E-value=54 Score=28.88 Aligned_cols=55 Identities=7% Similarity=0.122 Sum_probs=37.6
Q ss_pred CCCccceeeccCchhHHHHHHh-----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 144 HGSTGGFLSHCGWNSVLESIVH-----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~~-----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
.++ ++|+=||-||++.|+.. .+|++.+...+ .+|+. .+ ++.+++.+++.+++++
T Consensus 39 ~~D--~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL---~~---~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 39 NAN--IIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFY---CD---FHIDDLDKMIQAITKE 97 (264)
T ss_pred Ccc--EEEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEc---cc---CCHHHHHHHHHHHHcC
Confidence 356 99999999999999874 56666653200 12322 22 5778899999998875
Q ss_pred C
Q 042249 219 E 219 (264)
Q Consensus 219 ~ 219 (264)
+
T Consensus 98 ~ 98 (264)
T PRK03501 98 E 98 (264)
T ss_pred C
Confidence 3
No 184
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=43.77 E-value=47 Score=29.33 Aligned_cols=54 Identities=20% Similarity=0.350 Sum_probs=38.7
Q ss_pred CCCccceeeccCchhHHHHHHh-CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCC
Q 042249 144 HGSTGGFLSHCGWNSVLESIVH-GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~~-GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
.++ ++|+=||-||++.++.. .+|++++-. =.+|+.- + ++.+++.++++++++++
T Consensus 52 ~~D--~vi~lGGDGT~L~a~~~~~~PilGIN~--------------G~lGFL~---~---~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NAD--VIITIGGDGTILRTLQRAKGPILGINM--------------GGLGFLT---E---IEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCC--EEEEEcCcHHHHHHHHHcCCCEEEEEC--------------CCCccCc---c---cCHHHHHHHHHHHHcCC
Confidence 467 99999999999999874 567776532 1123322 1 67799999999998763
No 185
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=43.20 E-value=2.6e+02 Score=26.10 Aligned_cols=54 Identities=20% Similarity=0.175 Sum_probs=34.2
Q ss_pred HHhCcceeecCCCchHHH-------HHHHHHhhcCceeEeec------cC---CCCCCHHHHHHHHHHHhc
Q 042249 163 IVHGVPIIAWPLYAEQKM-------NAVLLTDDLKVAWRVKV------NE---DGLVGREEVATYARGLIQ 217 (264)
Q Consensus 163 l~~GvP~l~~P~~~DQ~~-------na~~v~~~~G~G~~l~~------~~---~~~~~~~~l~~ai~~ll~ 217 (264)
+.+-+|+++.|-..+.++ |..++.+ .|+-+.-.. .+ ....+.++|...+.+.+.
T Consensus 109 ~~~~~plviaPamn~~m~~~p~~~~Nl~~L~~-~G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~ 178 (390)
T TIGR00521 109 LAASAPIILAPAMNENMYNNPAVQENIKRLKD-DGYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFS 178 (390)
T ss_pred HHhCCCEEEEeCCChhhcCCHHHHHHHHHHHH-CCcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHh
Confidence 444599999998665443 6677777 765543332 11 113577888888877764
No 186
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=43.12 E-value=58 Score=28.38 Aligned_cols=28 Identities=14% Similarity=0.219 Sum_probs=22.9
Q ss_pred CCccceeeccCchhHHHHHHh----CcceeecCC
Q 042249 145 GSTGGFLSHCGWNSVLESIVH----GVPIIAWPL 174 (264)
Q Consensus 145 ~~~~~~ItHGG~~si~eal~~----GvP~l~~P~ 174 (264)
++ ++|+-||-||++.|+.. ++|++++-.
T Consensus 26 ~D--lvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 26 AD--VIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CC--EEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 56 99999999999988664 678888743
No 187
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.69 E-value=56 Score=28.53 Aligned_cols=53 Identities=15% Similarity=0.225 Sum_probs=37.8
Q ss_pred CCCccceeeccCchhHHHHHH-hCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 144 HGSTGGFLSHCGWNSVLESIV-HGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~-~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
.++ ++|+=||-||++.|+. +++|++.+-. -.+|.... ++.+++.+++.+++.+
T Consensus 41 ~~d--~vi~iGGDGT~L~a~~~~~~Pilgin~--------------G~lGfl~~------~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 41 TAD--LIIVVGGDGTVLKAAKKVGTPLVGFKA--------------GRLGFLSS------YTLEEIDRFLEDLKNW 94 (256)
T ss_pred CCC--EEEEECCcHHHHHHHHHcCCCEEEEeC--------------CCCccccc------cCHHHHHHHHHHHHcC
Confidence 456 9999999999999876 5788777632 11333322 5678888888888875
No 188
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=41.97 E-value=2.1e+02 Score=23.97 Aligned_cols=93 Identities=13% Similarity=0.073 Sum_probs=47.5
Q ss_pred hhccCCCCccceeeccCchhHHH-----HHHhCcceeecCCCchHHHHHHH----HHhhcC-ceeEeeccCCCCCCHHHH
Q 042249 139 IQVLSHGSTGGFLSHCGWNSVLE-----SIVHGVPIIAWPLYAEQKMNAVL----LTDDLK-VAWRVKVNEDGLVGREEV 208 (264)
Q Consensus 139 ~~lL~~~~~~~~ItHGG~~si~e-----al~~GvP~l~~P~~~DQ~~na~~----v~~~~G-~G~~l~~~~~~~~~~~~l 208 (264)
...|..+. ++|..-|...+.+ |-..|+|+-++ |.+..+.. +.+ .| +-+.+..+.....-...|
T Consensus 64 ~~dl~~~~--lVi~at~d~~ln~~i~~~a~~~~ilvn~~----d~~e~~~f~~pa~~~-~g~l~iaisT~G~sP~la~~l 136 (205)
T TIGR01470 64 ADILEGAF--LVIAATDDEELNRRVAHAARARGVPVNVV----DDPELCSFIFPSIVD-RSPVVVAISSGGAAPVLARLL 136 (205)
T ss_pred HHHhCCcE--EEEECCCCHHHHHHHHHHHHHcCCEEEEC----CCcccCeEEEeeEEE-cCCEEEEEECCCCCcHHHHHH
Confidence 34466666 6666666654433 34457777332 22222211 122 22 333333322112345678
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHhhc
Q 042249 209 ATYARGLIQGEDGKLLRDKMRVLKDAAANAL 239 (264)
Q Consensus 209 ~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~ 239 (264)
++.|++++.. .-..+-+.+.++++.+++..
T Consensus 137 r~~ie~~l~~-~~~~~~~~~~~~R~~~k~~~ 166 (205)
T TIGR01470 137 RERIETLLPP-SLGDLATLAATWRDAVKKRL 166 (205)
T ss_pred HHHHHHhcch-hHHHHHHHHHHHHHHHHhhC
Confidence 8888888853 22356666667777776543
No 189
>PRK08322 acetolactate synthase; Reviewed
Probab=40.42 E-value=79 Score=30.56 Aligned_cols=27 Identities=30% Similarity=0.386 Sum_probs=22.0
Q ss_pred ccceeeccCc------hhHHHHHHhCcceeecC
Q 042249 147 TGGFLSHCGW------NSVLESIVHGVPIIAWP 173 (264)
Q Consensus 147 ~~~~ItHGG~------~si~eal~~GvP~l~~P 173 (264)
.+++++|.|- +.+.+|...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4478888774 47899999999999995
No 190
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=39.96 E-value=54 Score=26.28 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=20.2
Q ss_pred ceeeccCc------hhHHHHHHhCcceeecCC
Q 042249 149 GFLSHCGW------NSVLESIVHGVPIIAWPL 174 (264)
Q Consensus 149 ~~ItHGG~------~si~eal~~GvP~l~~P~ 174 (264)
++++|.|- +.+.+|...++|+|++.-
T Consensus 62 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 62 ALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred EEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 66666663 467899999999999964
No 191
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=39.72 E-value=71 Score=25.66 Aligned_cols=27 Identities=22% Similarity=0.293 Sum_probs=21.8
Q ss_pred cceeeccCc------hhHHHHHHhCcceeecCC
Q 042249 148 GGFLSHCGW------NSVLESIVHGVPIIAWPL 174 (264)
Q Consensus 148 ~~~ItHGG~------~si~eal~~GvP~l~~P~ 174 (264)
+++++|.|- +.+.+|...++|+|++.-
T Consensus 65 ~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~g 97 (164)
T cd07039 65 GVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIAG 97 (164)
T ss_pred EEEEECCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 377788774 477899999999999963
No 192
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=38.65 E-value=3.9e+02 Score=26.31 Aligned_cols=144 Identities=15% Similarity=0.189 Sum_probs=73.6
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEe
Q 042249 53 NGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVV 132 (264)
Q Consensus 53 ~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i 132 (264)
..+.|-|-+||.. +....+++...|+..+..+-..+-+.. ..|+.+.
T Consensus 409 ~~~~v~i~~gs~s--d~~~~~~~~~~l~~~g~~~~~~v~sah---------------------r~~~~~~---------- 455 (577)
T PLN02948 409 GTPLVGIIMGSDS--DLPTMKDAAEILDSFGVPYEVTIVSAH---------------------RTPERMF---------- 455 (577)
T ss_pred CCCeEEEEECchh--hHHHHHHHHHHHHHcCCCeEEEEECCc---------------------cCHHHHH----------
Confidence 3456777777765 566677777788877765443332211 2344322
Q ss_pred cccCCchhccCCCCccceeeccCchhHHHHHHh---CcceeecCCCch---HHHHHHHHHhhc--CceeEe-eccCCCCC
Q 042249 133 PSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVH---GVPIIAWPLYAE---QKMNAVLLTDDL--KVAWRV-KVNEDGLV 203 (264)
Q Consensus 133 ~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~---GvP~l~~P~~~D---Q~~na~~v~~~~--G~G~~l-~~~~~~~~ 203 (264)
.|+-+..- . ..++||.-.|.-.-+-.+.+ -+|+|.+|.... -..-..-+.+ . |+.+.. ..++ ..
T Consensus 456 -~~~~~~~~-~--~~~v~i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~l~s~~~-~p~g~pv~~v~i~~--~~ 528 (577)
T PLN02948 456 -SYARSAHS-R--GLQVIIAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDSLLSIVQ-MPRGVPVATVAIGN--AT 528 (577)
T ss_pred -HHHHHHHH-C--CCCEEEEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHHHHHHhc-CCCCCeEEEEecCC--hH
Confidence 22211110 1 12377777775433333333 489999998432 2222223344 4 543322 2211 23
Q ss_pred CHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcC
Q 042249 204 GREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALS 240 (264)
Q Consensus 204 ~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~ 240 (264)
++.-+...|-.+ .++ .++++.+..++.+++.+.
T Consensus 529 ~aa~~a~~i~~~-~~~---~~~~~~~~~~~~~~~~~~ 561 (577)
T PLN02948 529 NAGLLAVRMLGA-SDP---DLLDKMEAYQEDMRDMVL 561 (577)
T ss_pred HHHHHHHHHHhc-CCH---HHHHHHHHHHHHHHHHHH
Confidence 445444444333 243 788888877777776543
No 193
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=38.60 E-value=22 Score=27.83 Aligned_cols=40 Identities=28% Similarity=0.383 Sum_probs=28.2
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHH-----hcCCeEEEEEeCCC
Q 042249 55 SVLFVCFGSGGSLSQKQLNELALGLE-----MSGQRFLWVVKCPD 94 (264)
Q Consensus 55 ~vVyvs~GS~~~~~~~~~~~l~~al~-----~~~~~viw~~~~~~ 94 (264)
.+|+|+.|+..+.....+..++.... .....|+|+++...
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~~ 47 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDAD 47 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-TT
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCchh
Confidence 48999999987666667777776665 23468999998753
No 194
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=38.41 E-value=3.4e+02 Score=25.40 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=42.7
Q ss_pred ceeeccCchhHHH-------------HHHhCcceeecCCCchH-------HHHHHHHHhhcCceeEeec------cC---
Q 042249 149 GFLSHCGWNSVLE-------------SIVHGVPIIAWPLYAEQ-------KMNAVLLTDDLKVAWRVKV------NE--- 199 (264)
Q Consensus 149 ~~ItHGG~~si~e-------------al~~GvP~l~~P~~~DQ-------~~na~~v~~~~G~G~~l~~------~~--- 199 (264)
++|.-+-+||+.- ++.+++|+++.|-.... ..|..++.+ .|+-+.-.. .+
T Consensus 86 ~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ii~P~~g~la~~~~g~ 164 (399)
T PRK05579 86 VLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRS-RGVEIIGPASGRLACGDVGP 164 (399)
T ss_pred EEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHH-CCCEEECCCCccccCCCcCC
Confidence 5666666665533 35669999999954432 457777777 776654221 11
Q ss_pred CCCCCHHHHHHHHHHHhc
Q 042249 200 DGLVGREEVATYARGLIQ 217 (264)
Q Consensus 200 ~~~~~~~~l~~ai~~ll~ 217 (264)
....+.++|...+.+.+.
T Consensus 165 gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 165 GRMAEPEEIVAAAERALS 182 (399)
T ss_pred CCCCCHHHHHHHHHHHhh
Confidence 113578888888887764
No 195
>TIGR03164 UHCUDC OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model.
Probab=37.99 E-value=2.1e+02 Score=22.96 Aligned_cols=55 Identities=7% Similarity=0.163 Sum_probs=43.0
Q ss_pred HHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 042249 178 QKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAA 236 (264)
Q Consensus 178 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~ 236 (264)
+..|..+-++ .|.-..+--.. -+.++|.+.+++=|.++...+.+..+.++.+..+
T Consensus 97 ~~lN~~Y~~k-FGfpFvi~v~g---~~~~~Il~~l~~Rl~n~~~~E~~~a~~Ev~kIa~ 151 (157)
T TIGR03164 97 TRLNNAYRAR-FGFPFIMAVKG---KTKQSILAAFEARLNNDRETEFARALREIERIAR 151 (157)
T ss_pred HHHHHHHHHH-CCCeeEEeeCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 3568888888 88888776543 5889999999999988766678888777777654
No 196
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.74 E-value=62 Score=31.75 Aligned_cols=54 Identities=28% Similarity=0.335 Sum_probs=39.3
Q ss_pred CCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCC
Q 042249 144 HGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGE 219 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 219 (264)
.++ ++|+-||-||++.+... ++|++++-+ =.+|+.- + ++.+++.++++++++++
T Consensus 348 ~~d--lvi~lGGDGT~L~aa~~~~~~~~PilGin~--------------G~lGFL~---~---~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 348 EIS--HIISIGGDGTVLRASKLVNGEEIPIICINM--------------GTVGFLT---E---FSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCC--EEEEECCcHHHHHHHHHhcCCCCCEEEEcC--------------CCCCcCc---c---cCHHHHHHHHHHHHcCC
Confidence 456 99999999999999764 778888743 1133322 1 56788999999998763
No 197
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=36.94 E-value=57 Score=28.68 Aligned_cols=38 Identities=11% Similarity=0.255 Sum_probs=22.7
Q ss_pred cEEEEEecCCCCCCHH-HHHHHHHHHHhc--CCeEEEEEeC
Q 042249 55 SVLFVCFGSGGSLSQK-QLNELALGLEMS--GQRFLWVVKC 92 (264)
Q Consensus 55 ~vVyvs~GS~~~~~~~-~~~~l~~al~~~--~~~viw~~~~ 92 (264)
.+|.|||||...-..+ .+..+...+++. +..|.|+..+
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 4789999998654443 666677776654 5788888754
No 198
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=36.57 E-value=1.7e+02 Score=28.31 Aligned_cols=93 Identities=16% Similarity=0.145 Sum_probs=64.3
Q ss_pred cCchhHHHHHHhCcceeecCCCc--hH----HHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHH
Q 042249 154 CGWNSVLESIVHGVPIIAWPLYA--EQ----KMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDK 227 (264)
Q Consensus 154 GG~~si~eal~~GvP~l~~P~~~--DQ----~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~ 227 (264)
||. |=++|+.+|.+-|+.|..+ |- ..+. ... -|.|+.+.. .+++++..++++.+. -|+..
T Consensus 381 cGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~-~gtGf~f~~-----~~~~~l~~al~rA~~-----~y~~~ 446 (487)
T COG0297 381 CGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQG-VGTGFLFLQ-----TNPDHLANALRRALV-----LYRAP 446 (487)
T ss_pred CcH-HHHHHHHcCCcceEcccCCccceecCccchh--ccC-ceeEEEEec-----CCHHHHHHHHHHHHH-----HhhCC
Confidence 444 5678999999888888632 32 1122 344 788888876 589999999998885 56666
Q ss_pred HHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 042249 228 MRVLKDAAANALSPDGFSTKSLANVAQKWKNLE 260 (264)
Q Consensus 228 a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 260 (264)
...++...+.++.-.-|-.....+.++-.+.+-
T Consensus 447 ~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 447 PLLWRKVQPNAMGADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred HHHHHHHHHhhcccccCchhHHHHHHHHHHHHh
Confidence 555777777777656666667777777666554
No 199
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=36.38 E-value=1e+02 Score=30.17 Aligned_cols=26 Identities=19% Similarity=0.339 Sum_probs=21.4
Q ss_pred cceeeccCc------hhHHHHHHhCcceeecC
Q 042249 148 GGFLSHCGW------NSVLESIVHGVPIIAWP 173 (264)
Q Consensus 148 ~~~ItHGG~------~si~eal~~GvP~l~~P 173 (264)
+++++|.|- +.+.+|...++|+|++.
T Consensus 65 gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 65 GVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred EEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 378888773 47899999999999994
No 200
>PRK13798 putative OHCU decarboxylase; Provisional
Probab=36.38 E-value=2.3e+02 Score=22.99 Aligned_cols=55 Identities=5% Similarity=-0.013 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 042249 178 QKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAA 236 (264)
Q Consensus 178 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~ 236 (264)
+..|+++-++ .|.=+.+--.. -++++|.+.+++=|.++.-.+++..+.++++..+
T Consensus 102 ~~lN~~Y~~k-FGfpFii~v~g---~s~~~IL~~l~~Rl~n~~e~E~~~al~Ev~kIa~ 156 (166)
T PRK13798 102 AAGNRAYEEK-FGFVFLICATG---RSADEMLAALQQRLHNDPETERKVVREELAKINR 156 (166)
T ss_pred HHHHHHHHHh-CCCeEEEeeCC---CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 4678888888 88887776543 5889999999999888666788888888888765
No 201
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=35.48 E-value=2.5e+02 Score=23.05 Aligned_cols=54 Identities=13% Similarity=0.073 Sum_probs=33.2
Q ss_pred HHh--CcceeecCCCchH-------HHHHHHHHhhcCceeEeecc---------CCCCCCHHHHHHHHHHHhc
Q 042249 163 IVH--GVPIIAWPLYAEQ-------KMNAVLLTDDLKVAWRVKVN---------EDGLVGREEVATYARGLIQ 217 (264)
Q Consensus 163 l~~--GvP~l~~P~~~DQ-------~~na~~v~~~~G~G~~l~~~---------~~~~~~~~~l~~ai~~ll~ 217 (264)
+.. ++|+++.|-.... ..|..++.+ .|+=+.-... .....+.++|.+.+.+.+.
T Consensus 108 ~a~~~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~-~G~~vi~p~~g~la~~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 108 LALPATTPKLIAPAMNTKMYENPATQRNLKTLKE-DGVQEIEPKEGLLACGDEGYGALADIETILETIENTLK 179 (182)
T ss_pred HHcCCCCCEEEEECCCHHHhcCHHHHHHHHHHHH-CCCEEECCCCCccccCCccCCCCCCHHHHHHHHHHHhc
Confidence 445 8999999964322 446677777 7755543321 1123467788777777654
No 202
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=35.12 E-value=27 Score=22.96 Aligned_cols=56 Identities=16% Similarity=0.191 Sum_probs=34.6
Q ss_pred eccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 042249 196 KVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQK 255 (264)
Q Consensus 196 ~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 255 (264)
+.+.+|.++.+++...++.+.... .........+.+-+.++.++...-++++|++-
T Consensus 10 D~d~~G~i~~~el~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 10 DKDGDGYISKEELRRALKHLGRDM----SDEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp STTSSSEEEHHHHHHHHHHTTSHS----THHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred cCCccCCCCHHHHHHHHHHhcccc----cHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 344567899999999999997632 12333333333333556666666666666653
No 203
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=34.83 E-value=88 Score=30.43 Aligned_cols=25 Identities=8% Similarity=0.309 Sum_probs=20.8
Q ss_pred ceeeccCc------hhHHHHHHhCcceeecC
Q 042249 149 GFLSHCGW------NSVLESIVHGVPIIAWP 173 (264)
Q Consensus 149 ~~ItHGG~------~si~eal~~GvP~l~~P 173 (264)
++++|.|- +.+.+|...++|+|++.
T Consensus 79 v~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 79 VCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred EEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 77777774 47899999999999995
No 204
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=33.44 E-value=4.5e+02 Score=25.33 Aligned_cols=55 Identities=20% Similarity=0.165 Sum_probs=36.6
Q ss_pred HHHhCcceeecCCCchH-------HHHHHHHHhhcCceeEeecc-------C---CCCCCHHHHHHHHHHHhc
Q 042249 162 SIVHGVPIIAWPLYAEQ-------KMNAVLLTDDLKVAWRVKVN-------E---DGLVGREEVATYARGLIQ 217 (264)
Q Consensus 162 al~~GvP~l~~P~~~DQ-------~~na~~v~~~~G~G~~l~~~-------~---~~~~~~~~l~~ai~~ll~ 217 (264)
++..+.|+++.|-.... ..|...+.+ .|+-+.-... + .....+++|...+.+++.
T Consensus 176 ~La~~~PvliaPaMN~~M~~npat~~Nl~~L~~-~G~~vi~P~~g~lA~~g~~G~Grm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 176 LLAANRPILLAPAMNPLMWNNPATRRNVAQLKR-DGVHMIGPNAGEMAERGEAGVGRMAEPLEIAAAAEALLR 247 (475)
T ss_pred HHhcCCCEEEEEcCCHHHhcCHHHHHHHHHHHH-CCCEEECCCCCccccCCCcCCCCCCCHHHHHHHHHHHHh
Confidence 36678999999976544 357778888 7766542211 1 113567888888887763
No 205
>PRK06242 flavodoxin; Provisional
Probab=33.07 E-value=1.4e+02 Score=23.08 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=32.2
Q ss_pred CeEeecccccCCCCCCCChhhHHHhhccCCC-CcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEE
Q 042249 23 PVYPVGPLILTGSINESDRTDCLKWLDDQPN-GSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFL 87 (264)
Q Consensus 23 ~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~-~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~vi 87 (264)
.+++..|.+.. ..+..+.+|++.... ...-++.|||.+......+..+...+...+..++
T Consensus 46 ~ii~g~pvy~~-----~~~~~~~~fl~~~~~~~~k~~~~f~t~g~~~~~~~~~l~~~l~~~g~~~~ 106 (150)
T PRK06242 46 LIGFGSGIYFG-----KFHKSLLKLIEKLPPVSGKKAFIFSTSGLPFLKYHKALKKKLKEKGFEIV 106 (150)
T ss_pred EEEEeCchhcC-----CcCHHHHHHHHhhhhhcCCeEEEEECCCCCcchHHHHHHHHHHHCCCEEE
Confidence 34555565543 245677788865321 1223444555444333335666667777777765
No 206
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=32.20 E-value=4.2e+02 Score=24.69 Aligned_cols=87 Identities=18% Similarity=0.197 Sum_probs=53.4
Q ss_pred cccC---CchhccCCCCccceeeccCch-----hHHHHHHhCcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCC
Q 042249 133 PSWA---PQIQVLSHGSTGGFLSHCGWN-----SVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVG 204 (264)
Q Consensus 133 ~~~v---pq~~lL~~~~~~~~ItHGG~~-----si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 204 (264)
..|. ++..+|+.++.|+.+|-...| -+..-.-+|+|++.+-+ .--..+++.---|... -+
T Consensus 324 tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f-----kcl~ELVkh~eNGlvF-------~D 391 (444)
T KOG2941|consen 324 TPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF-----KCLDELVKHGENGLVF-------ED 391 (444)
T ss_pred ecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc-----hhHHHHHhcCCCceEe-------cc
Confidence 3565 567889999998888876655 45666677777777643 1222233302234333 25
Q ss_pred HHHHHHHHHHHhcC----Cc-hHHHHHHHHHH
Q 042249 205 REEVATYARGLIQG----ED-GKLLRDKMRVL 231 (264)
Q Consensus 205 ~~~l~~ai~~ll~~----~~-~~~~r~~a~~l 231 (264)
.+++.+.+.-++.+ .+ ..++|+|+++-
T Consensus 392 s~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 392 SEELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 78999999888872 11 33566665553
No 207
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=31.71 E-value=1.9e+02 Score=25.78 Aligned_cols=70 Identities=11% Similarity=-0.069 Sum_probs=39.5
Q ss_pred eEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCC
Q 042249 24 VYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCP 93 (264)
Q Consensus 24 ~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~ 93 (264)
-.|+|-...++......-.++..+.....-+.+-.-..........+.+..+.+++++.+..|++-++..
T Consensus 98 drf~~~~~v~p~~~~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~ 167 (293)
T COG2159 98 DRFVGFARVDPRDPEAAAEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAG 167 (293)
T ss_pred cceeeeeeeCCCchHHHHHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4567766666543212334666666654322222222222333444557788888989998888866543
No 208
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=31.35 E-value=38 Score=27.26 Aligned_cols=39 Identities=10% Similarity=0.120 Sum_probs=28.2
Q ss_pred CCchhccCCCCccceeeccCchhHH---HHHHhCcceeecCC
Q 042249 136 APQIQVLSHGSTGGFLSHCGWNSVL---ESIVHGVPIIAWPL 174 (264)
Q Consensus 136 vpq~~lL~~~~~~~~ItHGG~~si~---eal~~GvP~l~~P~ 174 (264)
.+...++...+..+++--||.||+. |++.+++|+++++.
T Consensus 82 ~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 82 FARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred chHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 3455555555555777788999875 56889999999985
No 209
>PRK11914 diacylglycerol kinase; Reviewed
Probab=31.07 E-value=1.2e+02 Score=26.89 Aligned_cols=26 Identities=12% Similarity=0.197 Sum_probs=22.0
Q ss_pred ceeeccCchhHHHHH----HhCcceeecCC
Q 042249 149 GFLSHCGWNSVLESI----VHGVPIIAWPL 174 (264)
Q Consensus 149 ~~ItHGG~~si~eal----~~GvP~l~~P~ 174 (264)
++|--||=||+.|++ ..++|+-++|.
T Consensus 67 ~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 67 ALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred EEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 789999999998887 34789999996
No 210
>COG2987 HutU Urocanate hydratase [Amino acid transport and metabolism]
Probab=30.48 E-value=43 Score=31.80 Aligned_cols=40 Identities=30% Similarity=0.241 Sum_probs=26.5
Q ss_pred ecccCCchhccCCCC--ccceeeccCchhHHHHHHhCcceee
Q 042249 132 VPSWAPQIQVLSHGS--TGGFLSHCGWNSVLESIVHGVPIIA 171 (264)
Q Consensus 132 i~~~vpq~~lL~~~~--~~~~ItHGG~~si~eal~~GvP~l~ 171 (264)
+.+|.=+.++|..++ +=+-+||||.-.+-.+++.|.-+++
T Consensus 467 vsDwp~lnallntA~GatwvslHhGGGvgmG~s~h~G~viVa 508 (561)
T COG2987 467 VSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIVA 508 (561)
T ss_pred hhhhHHHHHHhhhccCCcEEEEecCCcccccccccCceEEEe
Confidence 567877788776542 2257899998777777665544443
No 211
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=30.18 E-value=1.1e+02 Score=27.12 Aligned_cols=74 Identities=7% Similarity=0.112 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEecccCCchhccCCC
Q 042249 66 SLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVVPSWAPQIQVLSHG 145 (264)
Q Consensus 66 ~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i~~~vpq~~lL~~~ 145 (264)
..+.+..+++.+++.....+.||.+++... -.++.++++...+-.++
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g---------------------------------a~rlL~~ld~~~~~~~p 91 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGYG---------------------------------ANRLLPYLDYDLIRANP 91 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcCC---------------------------------HHHhhhhCCHHHHhhCC
Confidence 445577888999999999999999987543 01233444444444555
Q ss_pred CccceeeccCchhHHHHHHh--CcceeecCC
Q 042249 146 STGGFLSHCGWNSVLESIVH--GVPIIAWPL 174 (264)
Q Consensus 146 ~~~~~ItHGG~~si~eal~~--GvP~l~~P~ 174 (264)
. +|+=+.-..+++-+++. |++.+--|+
T Consensus 92 K--~~iGySDiTaL~~~l~~~~g~~t~hGp~ 120 (282)
T cd07025 92 K--IFVGYSDITALHLALYAKTGLVTFHGPM 120 (282)
T ss_pred e--EEEEecHHHHHHHHHHHhcCceEEECcc
Confidence 5 77777767777777654 666666664
No 212
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=29.99 E-value=2.8e+02 Score=29.19 Aligned_cols=102 Identities=12% Similarity=-0.018 Sum_probs=59.1
Q ss_pred hhccCCCCccceee---ccCchh-HHHHHHhCc---ceeecCCCchHHHHHHHHHhhcC-ceeEeeccCCCCCCHHHHHH
Q 042249 139 IQVLSHGSTGGFLS---HCGWNS-VLESIVHGV---PIIAWPLYAEQKMNAVLLTDDLK-VAWRVKVNEDGLVGREEVAT 210 (264)
Q Consensus 139 ~~lL~~~~~~~~It---HGG~~s-i~eal~~Gv---P~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~l~~ 210 (264)
.+++..++ +|+. .-|+|. .+|+++++. -+++++-+.- .... +| -|+.+++ .+.+++.+
T Consensus 454 ~AlY~~AD--V~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaG------aa~~-L~~~AllVNP-----~D~~~vA~ 519 (934)
T PLN03064 454 CALYAVTD--VALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAG------AAQS-LGAGAILVNP-----WNITEVAA 519 (934)
T ss_pred HHHHHhCC--EEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCc------hHHH-hCCceEEECC-----CCHHHHHH
Confidence 35666777 4443 347764 469999954 2222232211 1122 43 4677776 67899999
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 042249 211 YARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLE 260 (264)
Q Consensus 211 ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 260 (264)
+|.+.|.-+. ++-+++.+++.+.+. ..+...=+++|+++|.+..
T Consensus 520 AI~~AL~M~~-~Er~~r~~~~~~~V~-----~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 520 SIAQALNMPE-EEREKRHRHNFMHVT-----THTAQEWAETFVSELNDTV 563 (934)
T ss_pred HHHHHHhCCH-HHHHHHHHHHHhhcc-----cCCHHHHHHHHHHHHHHHH
Confidence 9999987321 244444444544444 2455555677777776653
No 213
>TIGR03180 UraD_2 OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model. This model is a separate (but related) clade from that represented by TIGR3164. This model places a second homolog in streptomyces species which (are not in the vicinity of other urate catabolism associated genes) below the trusted cutoff.
Probab=29.70 E-value=3e+02 Score=22.15 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=43.0
Q ss_pred HHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 042249 178 QKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAA 236 (264)
Q Consensus 178 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~ 236 (264)
+..|..+-++ .|.-..+--.. -+.++|.+.+++=|.|+.-.+++..+.++.+..+
T Consensus 97 ~~lN~~Y~~k-FGfpFii~v~g---~s~~~IL~~l~~Rl~n~~e~E~~~al~Ev~kIa~ 151 (158)
T TIGR03180 97 LEGNAAYEEK-FGRIFLIRAAG---RSAEEMLDALQARLPNDPEQELTIAAEQLRKINR 151 (158)
T ss_pred HHHHHHHHHH-CCCeEEEeeCC---CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3568888888 88887776443 5889999999998888666678888888877765
No 214
>COG3200 AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=29.53 E-value=1.6e+02 Score=27.13 Aligned_cols=76 Identities=17% Similarity=0.272 Sum_probs=46.7
Q ss_pred CcHHHHHHHHhhhhccCCCCCeEeecccccCCCCCCCChhhHHHh---hccCC--CCcEEEEEecCCCCCCHHHHHHHHH
Q 042249 3 LEPGAFKALMKSRESSFRLPPVYPVGPLILTGSINESDRTDCLKW---LDDQP--NGSVLFVCFGSGGSLSQKQLNELAL 77 (264)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~p~~~~vGpl~~~~~~~~~~~~~~~~w---l~~~~--~~~vVyvs~GS~~~~~~~~~~~l~~ 77 (264)
+++.-++|++-. .-|--+=|||-.. ++++... |+... .+-.+++-||+.. -.+.+..++.
T Consensus 271 ~D~AHVe~~rgv-----~NPig~K~GP~~~--------~d~ll~l~d~LnP~nepGRLtLi~RmG~dK--V~d~LP~li~ 335 (445)
T COG3200 271 PDGAHVEFLRGV-----KNPIGVKIGPSMT--------PDELLELIDRLNPHNEPGRLTLIARMGADK--VGDRLPPLVE 335 (445)
T ss_pred CChhHHHHHHhc-----CCccccccCCCCC--------HHHHHHHHHhcCCCCCCceEEeehhhcchH--HhhhhhHHHH
Confidence 344455566552 2233445566542 2344444 44332 3446777788754 2467888999
Q ss_pred HHHhcCCeEEEEEeCC
Q 042249 78 GLEMSGQRFLWVVKCP 93 (264)
Q Consensus 78 al~~~~~~viw~~~~~ 93 (264)
+.+..|..|||...+-
T Consensus 336 av~~eG~~VvWs~DPM 351 (445)
T COG3200 336 AVEAEGHQVIWSSDPM 351 (445)
T ss_pred HHHHcCCceEEecCCC
Confidence 9999999999998764
No 215
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=29.51 E-value=2e+02 Score=22.31 Aligned_cols=26 Identities=12% Similarity=0.249 Sum_probs=20.9
Q ss_pred ceeeccC------chhHHHHHHhCcceeecCC
Q 042249 149 GFLSHCG------WNSVLESIVHGVPIIAWPL 174 (264)
Q Consensus 149 ~~ItHGG------~~si~eal~~GvP~l~~P~ 174 (264)
++++|.| .+.+.+|...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 7777766 3477899999999999964
No 216
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=28.92 E-value=1.2e+02 Score=24.57 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=22.6
Q ss_pred CCCcEEEEEecCCCCCCHHHHHHHHHHHHhcC
Q 042249 52 PNGSVLFVCFGSGGSLSQKQLNELALGLEMSG 83 (264)
Q Consensus 52 ~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~ 83 (264)
+.+..+|+++||-.......+...+..|.+.+
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~~ 36 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAAP 36 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhCC
Confidence 44567999999986545566777777776643
No 217
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=28.74 E-value=2.1e+02 Score=24.98 Aligned_cols=26 Identities=19% Similarity=0.383 Sum_probs=19.7
Q ss_pred ceeeccCchhHHHHHHh-----Ccceee-cCC
Q 042249 149 GFLSHCGWNSVLESIVH-----GVPIIA-WPL 174 (264)
Q Consensus 149 ~~ItHGG~~si~eal~~-----GvP~l~-~P~ 174 (264)
++|.-||=||+.|++.. ..|.++ +|.
T Consensus 60 ~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 60 TVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred EEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 89999999999996543 345555 886
No 218
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=28.52 E-value=3.3e+02 Score=23.72 Aligned_cols=46 Identities=13% Similarity=0.249 Sum_probs=28.9
Q ss_pred hhccCCCCccceeeccCchhHHHHHHhCcceeecCCCchHHHHHHHHHhhcCc
Q 042249 139 IQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAEQKMNAVLLTDDLKV 191 (264)
Q Consensus 139 ~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 191 (264)
..++++++ ++|+-= .-+..-|+.+|+|.+.++. | +.....+.+ +|+
T Consensus 245 ~~~i~~~~--~vI~~R-lH~~I~A~~~gvP~i~i~y--~-~K~~~~~~~-~g~ 290 (298)
T TIGR03609 245 LGLFASAR--LVIGMR-LHALILAAAAGVPFVALSY--D-PKVRAFAAD-AGV 290 (298)
T ss_pred HHHHhhCC--EEEEec-hHHHHHHHHcCCCEEEeec--c-HHHHHHHHH-hCC
Confidence 34677888 777643 2346667899999998853 2 333344444 554
No 219
>PF03685 UPF0147: Uncharacterised protein family (UPF0147); InterPro: IPR005354 The proteins in this entry are functionally uncharacterised.; PDB: 2QZG_C 2QSB_A.
Probab=28.21 E-value=2.3e+02 Score=20.43 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCC-hHHHHHHHHHHHHhhhccCC
Q 042249 206 EEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGF-STKSLANVAQKWKNLENDTN 264 (264)
Q Consensus 206 ~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~-~~~~~~~~~~~~~~~~~~~~ 264 (264)
+++...+.++++|. ..=+|.++.++.+.+.....+. -.-....-+.-|....+|-|
T Consensus 9 ~~~~~~L~~I~~D~---sVPRNIRr~a~ea~~~L~~e~~~~~vRaataIs~LdeIsnDPN 65 (85)
T PF03685_consen 9 KQAIQMLERIINDT---SVPRNIRRAAEEAKEILNNEEESPGVRAATAISILDEISNDPN 65 (85)
T ss_dssp HHHHHHHHHHHT-T---TS-HHHHHHHHHHHHHCT-TTS-HHHHHHHHHHHHHHHCT-TT
T ss_pred HHHHHHHHHHhcCC---CCChHHHHHHHHHHHHHhCCCcchhHhHHHHHHHHHHhhcCCC
Confidence 45556667777776 5555555555555554444444 33344555555555555544
No 220
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=27.44 E-value=2.4e+02 Score=27.37 Aligned_cols=27 Identities=19% Similarity=0.207 Sum_probs=21.7
Q ss_pred ccceeeccCc------hhHHHHHHhCcceeecC
Q 042249 147 TGGFLSHCGW------NSVLESIVHGVPIIAWP 173 (264)
Q Consensus 147 ~~~~ItHGG~------~si~eal~~GvP~l~~P 173 (264)
.+++++|.|- +.+.+|...++|+|++-
T Consensus 72 ~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 104 (557)
T PRK08199 72 PGICFVTRGPGATNASIGVHTAFQDSTPMILFV 104 (557)
T ss_pred CEEEEeCCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3378888874 47799999999999983
No 221
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=27.36 E-value=3e+02 Score=22.18 Aligned_cols=65 Identities=14% Similarity=0.054 Sum_probs=35.4
Q ss_pred CCCCeEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeC
Q 042249 20 RLPPVYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKC 92 (264)
Q Consensus 20 ~~p~~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~ 92 (264)
..|++..+|-....-.. ....++.+.+....+ .+|+|++|+-. .+..+.+... ..+..++..+++
T Consensus 69 ~yp~l~i~g~~~g~~~~--~~~~~i~~~I~~~~p-div~vglG~Pk--QE~~~~~~~~---~l~~~v~~~vG~ 133 (171)
T cd06533 69 RYPGLKIVGYHHGYFGP--EEEEEIIERINASGA-DILFVGLGAPK--QELWIARHKD---RLPVPVAIGVGG 133 (171)
T ss_pred HCCCcEEEEecCCCCCh--hhHHHHHHHHHHcCC-CEEEEECCCCH--HHHHHHHHHH---HCCCCEEEEece
Confidence 55788888743322211 233447777777654 38999998632 2333333333 335565555555
No 222
>TIGR02302 aProt_lowcomp conserved hypothetical protein TIGR02302. Members of this family are long (~850 residue) bacterial proteins from the alpha Proteobacteria. Each has 2-3 predicted transmembrane helices near the N-terminus and a long C-terminal region that includes stretches of Gln/Gly-rich low complexity sequence, predicted by TMHMM to be outside the membrane. In Bradyrhizobium japonicum, two tandem reading frames are together homologous the single members found in other species; the cutoffs scores are set low enough that the longer scores above the trusted cutoff and the shorter above the noise cutoff for this model.
Probab=27.00 E-value=2e+02 Score=29.83 Aligned_cols=58 Identities=21% Similarity=0.283 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHH------hcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhhcc
Q 042249 204 GREEVATYARGL------IQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLEND 262 (264)
Q Consensus 204 ~~~~l~~ai~~l------l~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~~~ 262 (264)
+.+.+.+....+ +++.+...-.++.++-.+.+++|++. |.|...|++|+++|++.+++
T Consensus 475 ~~~~l~~v~~~LW~lAl~iEdG~ls~A~~~Lr~AQ~aL~eAL~~-gAsdeEI~~Lm~eLR~Am~~ 538 (851)
T TIGR02302 475 TDDALRDVADNLWSLALGIEDGDLSDAERRLRAAQDALKDALER-GASDEEIKQLTDKLRAAMQT 538 (851)
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHH
Confidence 344555544444 34555556777777777777777754 55677999999999887653
No 223
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=26.88 E-value=56 Score=26.38 Aligned_cols=26 Identities=23% Similarity=0.457 Sum_probs=21.2
Q ss_pred ceeeccCch------hHHHHHHhCcceeecCC
Q 042249 149 GFLSHCGWN------SVLESIVHGVPIIAWPL 174 (264)
Q Consensus 149 ~~ItHGG~~------si~eal~~GvP~l~~P~ 174 (264)
++++|+|-| .+.+|...++|||++.-
T Consensus 63 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 63 AVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred EEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 777787744 67899999999999954
No 224
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=26.74 E-value=1.2e+02 Score=23.30 Aligned_cols=37 Identities=16% Similarity=0.423 Sum_probs=25.6
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHHHhc--CCeEEEEEe
Q 042249 55 SVLFVCFGSGGSLSQKQLNELALGLEMS--GQRFLWVVK 91 (264)
Q Consensus 55 ~vVyvs~GS~~~~~~~~~~~l~~al~~~--~~~viw~~~ 91 (264)
.+|+++|||...-..+.+..+...+++. +..|-|...
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 5899999998764445677788877643 346666653
No 225
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=26.63 E-value=3.2e+02 Score=21.55 Aligned_cols=63 Identities=13% Similarity=0.199 Sum_probs=38.7
Q ss_pred CchhccCCCCccceeeccC-----chhHHHH---HHhCcceeecCCCch-----HHHHHHHHHhhcCceeEeeccCCCCC
Q 042249 137 PQIQVLSHGSTGGFLSHCG-----WNSVLES---IVHGVPIIAWPLYAE-----QKMNAVLLTDDLKVAWRVKVNEDGLV 203 (264)
Q Consensus 137 pq~~lL~~~~~~~~ItHGG-----~~si~ea---l~~GvP~l~~P~~~D-----Q~~na~~v~~~~G~G~~l~~~~~~~~ 203 (264)
.-..++..++ ++|-.=| ||+...| ++.|+|+|++---.- ...++..++. -
T Consensus 68 RT~~li~~aD--vvVvrFGekYKQWNaAfDAg~aaAlgKplI~lh~~~~~HpLKEvdaaA~ava---------------e 130 (144)
T TIGR03646 68 RTRKLIEKAD--VVIALFGEKYKQWNAAFDAGYAAALGKPLIILRPEELIHPLKEVDNKAQAVV---------------E 130 (144)
T ss_pred HHHHHHhhCC--EEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHHHHHHh---------------c
Confidence 3456677888 5555555 7877765 677999998843211 1223333333 3
Q ss_pred CHHHHHHHHHHHh
Q 042249 204 GREEVATYARGLI 216 (264)
Q Consensus 204 ~~~~l~~ai~~ll 216 (264)
+++++.+.++-++
T Consensus 131 tp~Qvv~iL~Yv~ 143 (144)
T TIGR03646 131 TPEQAIETLKYIL 143 (144)
T ss_pred CHHHHHHHHHHhh
Confidence 6777777777665
No 226
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=26.30 E-value=2.3e+02 Score=26.21 Aligned_cols=24 Identities=29% Similarity=0.537 Sum_probs=16.4
Q ss_pred hHHHhhccCCCCcEEEEEecCCCC
Q 042249 43 DCLKWLDDQPNGSVLFVCFGSGGS 66 (264)
Q Consensus 43 ~~~~wl~~~~~~~vVyvs~GS~~~ 66 (264)
+-.+.-.+.+++.+||++-|=-.+
T Consensus 120 dAl~iA~~nP~k~vVF~avGFETT 143 (364)
T PRK15062 120 DALKIARENPDKEVVFFAIGFETT 143 (364)
T ss_pred HHHHHHHHCCCCeEEEEecCchhc
Confidence 444566677788888888775443
No 227
>COG3563 KpsC Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=25.52 E-value=4.2e+02 Score=25.79 Aligned_cols=86 Identities=15% Similarity=0.180 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeE-ecccCCchhccCCCCc
Q 042249 69 QKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLV-VPSWAPQIQVLSHGST 147 (264)
Q Consensus 69 ~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-i~~~vpq~~lL~~~~~ 147 (264)
...+..+-.|+.+-+..-||+-..+ .|++|+.+. .|-. ....+.+. +.+-..-..+|.+.+-
T Consensus 166 ~~~l~m~~~ai~enp~a~i~~kthp-------dvl~gkkqg------~lt~----~~~~~r~~ll~edfnpisll~~~dk 228 (671)
T COG3563 166 STFLLMFQTAINENPQADIWVKTHP-------DVLCGKKQG------YLTQ----LSQQHRVHLLAEDFNPISLLQNVDK 228 (671)
T ss_pred hHHHHHHHHHHhcCCcccEEEEeCC-------chhcCcccc------hhhh----hccCceEEEecccCChHHHHHhcce
Confidence 3556667778888888889985433 357777652 1111 11112333 3444555667777774
Q ss_pred cceeeccCchhHHHHHHhCcceeecCC
Q 042249 148 GGFLSHCGWNSVLESIVHGVPIIAWPL 174 (264)
Q Consensus 148 ~~~ItHGG~~si~eal~~GvP~l~~P~ 174 (264)
...+|.+ +-.||+.+|+|.+++.+
T Consensus 229 vy~~ts~---mgfeall~~~~~~~fg~ 252 (671)
T COG3563 229 VYCVTSQ---MGFEALLCGKPLTTFGL 252 (671)
T ss_pred eEEeecc---ccHHHHhcCCceeeecc
Confidence 3444432 44799999999998764
No 228
>PRK04330 hypothetical protein; Provisional
Probab=25.51 E-value=2.7e+02 Score=20.25 Aligned_cols=55 Identities=15% Similarity=0.158 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhhccCC
Q 042249 207 EVATYARGLIQGED-GKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLENDTN 264 (264)
Q Consensus 207 ~l~~ai~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~~~~~ 264 (264)
++...+.++++|.. =...|+.|.+..+.+.+ ++.+-.-....-+..|....+|-|
T Consensus 13 ~~~~~L~~I~~D~sVPRNIRraa~ea~~~L~~---e~~~~~vRaA~AIs~LdeIs~DPN 68 (88)
T PRK04330 13 QAIQMLEEIINDTSVPRNIRRAATEAKEILLN---EEESPGVRAATAISILDEISNDPN 68 (88)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHhC---cCcchhHHHHHHHHHHHHhhcCCC
Confidence 44445566666652 12355555555555553 333444445555555555555544
No 229
>PRK10637 cysG siroheme synthase; Provisional
Probab=25.49 E-value=3.1e+02 Score=26.05 Aligned_cols=152 Identities=11% Similarity=-0.035 Sum_probs=72.1
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeCCCcccccccccccCCCCCCCCCCCCChhhhhhcCCCCeEe
Q 042249 53 NGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKCPDEKATNATYFGVHGMKEENPFDYLPKGFLDRTKGVGLVV 132 (264)
Q Consensus 53 ~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~i 132 (264)
.++++.|..|.... . =+..|.+.+..+.++...- .+++.......++.+
T Consensus 12 ~~~vlvvGgG~vA~------r-k~~~ll~~ga~v~visp~~------------------------~~~~~~l~~~~~i~~ 60 (457)
T PRK10637 12 DRDCLLVGGGDVAE------R-KARLLLDAGARLTVNALAF------------------------IPQFTAWADAGMLTL 60 (457)
T ss_pred CCEEEEECCCHHHH------H-HHHHHHHCCCEEEEEcCCC------------------------CHHHHHHHhCCCEEE
Confidence 45677777665541 1 1345556777776654321 122222222234443
Q ss_pred cccCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCC-CchHHHHHHH-----HHhhcCceeEeeccCCCCCCHH
Q 042249 133 PSWAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPL-YAEQKMNAVL-----LTDDLKVAWRVKVNEDGLVGRE 206 (264)
Q Consensus 133 ~~~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~-~~DQ~~na~~-----v~~~~G~G~~l~~~~~~~~~~~ 206 (264)
..---+..-|..+. ++|.--+-..+.+.++.-.--..+++ ..|++..+.. +.. -++-+.+..+..+..-..
T Consensus 61 ~~~~~~~~dl~~~~--lv~~at~d~~~n~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~~~-g~l~iaisT~G~sP~~a~ 137 (457)
T PRK10637 61 VEGPFDESLLDTCW--LAIAATDDDAVNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDR-SPLMVAVSSGGTSPVLAR 137 (457)
T ss_pred EeCCCChHHhCCCE--EEEECCCCHHHhHHHHHHHHHcCcEEEECCCcccCeEEEeeEEec-CCEEEEEECCCCCcHHHH
Confidence 32222344455555 55555555555555443222222222 2355443332 122 223344443321223456
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhc
Q 042249 207 EVATYARGLIQGEDGKLLRDKMRVLKDAAANAL 239 (264)
Q Consensus 207 ~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~ 239 (264)
.|++.|+.++. ++-..+-+.+.++++.+++.+
T Consensus 138 ~lr~~ie~~~~-~~~~~~~~~~~~~R~~~k~~~ 169 (457)
T PRK10637 138 LLREKLESLLP-QHLGQVAKYAGQLRGRVKQQF 169 (457)
T ss_pred HHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHhc
Confidence 78888888884 233356666667777766544
No 230
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=25.27 E-value=2.1e+02 Score=24.33 Aligned_cols=70 Identities=14% Similarity=0.115 Sum_probs=35.8
Q ss_pred eEeecccccCCCCCCCChhhHHHhhccCCCCcEEEEEecCCCC-------CC--HHHHHHHHHHHHhcCCeEEEEEeCCC
Q 042249 24 VYPVGPLILTGSINESDRTDCLKWLDDQPNGSVLFVCFGSGGS-------LS--QKQLNELALGLEMSGQRFLWVVKCPD 94 (264)
Q Consensus 24 ~~~vGpl~~~~~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~-------~~--~~~~~~l~~al~~~~~~viw~~~~~~ 94 (264)
+.++.-++...... .....+.+|+.....++=..+-.|=+.. .. ...+..++..+...+.+++++.|..+
T Consensus 3 i~~iSDlHl~~~~~-~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNHD 81 (241)
T PRK05340 3 TLFISDLHLSPERP-AITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNRD 81 (241)
T ss_pred EEEEeecCCCCCCh-hHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCCc
Confidence 45666666543211 1234566777543222224444455431 01 23444566667667788888877653
No 231
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=25.05 E-value=93 Score=23.46 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=25.7
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEeC
Q 042249 56 VLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVKC 92 (264)
Q Consensus 56 vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~~ 92 (264)
++++++||.+.. .=+..+..+|.+.|++|.+.+..
T Consensus 1 Ili~~~Gt~Ghv--~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 1 ILIATGGTRGHV--YPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEEESSHHHH--HHHHHHHHHHHHTT-EEEEEETG
T ss_pred CEEEEcCChhHH--HHHHHHHHHHhccCCeEEEeecc
Confidence 578899987733 33557889999999999877654
No 232
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=23.44 E-value=4.6e+02 Score=22.23 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=35.7
Q ss_pred CCeEeecccccCCCCCC--CChhhHHHhhccCCCCcEEEEEecCCCCCCHHHHHHHHHHHHhcCCeEEEEEe
Q 042249 22 PPVYPVGPLILTGSINE--SDRTDCLKWLDDQPNGSVLFVCFGSGGSLSQKQLNELALGLEMSGQRFLWVVK 91 (264)
Q Consensus 22 p~~~~vGpl~~~~~~~~--~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~al~~~~~~viw~~~ 91 (264)
|.++.+||++++..+.. +..-+...|+.....-|+|-+ |- .+.+.+ ..+...|...|-+++
T Consensus 125 ~DYv~~GpifpT~tK~~~~~~G~~~l~~~~~~~~iP~vAI--GG---i~~~nv----~~v~~~Ga~gVAvvs 187 (211)
T COG0352 125 ADYVGLGPIFPTSTKPDAPPLGLEGLREIRELVNIPVVAI--GG---INLENV----PEVLEAGADGVAVVS 187 (211)
T ss_pred CCEEEECCcCCCCCCCCCCccCHHHHHHHHHhCCCCEEEE--cC---CCHHHH----HHHHHhCCCeEEehh
Confidence 68999999998866432 233455567776655564333 32 344443 334455666665554
No 233
>PF09349 OHCU_decarbox: OHCU decarboxylase; InterPro: IPR018020 The proteins in this entry are OHCU decarboxylase, an enzyme of the purine catabolism that catalyses the conversion of OHCU into S(+)-allantoin []; it is the third step of the conversion of uric acid (a purine derivative) to allantoin. Step one is catalysed by urate oxidase (IPR002042 from INTERPRO) and step two is catalysed by hydroxyisourate hydrolase (IPR000895 from INTERPRO). ; PDB: 3O7I_B 3O7H_B 3O7J_A 3O7K_A 2Q37_A 2O70_B 2O73_C 2O74_C 2O8I_A.
Probab=23.36 E-value=3.6e+02 Score=21.57 Aligned_cols=54 Identities=9% Similarity=0.103 Sum_probs=36.3
Q ss_pred HHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 042249 179 KMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAA 236 (264)
Q Consensus 179 ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~ 236 (264)
..|..+-++ .|.=..+--.. -++++|.+.+++=|.++.-.+.+..+.++.+..+
T Consensus 101 ~lN~~Y~~k-FGf~Fvi~~~g---~s~~~Il~~l~~Rl~n~~~~E~~~A~~Ev~kIa~ 154 (159)
T PF09349_consen 101 ALNQAYEEK-FGFPFVICARG---RSAAEILAALERRLNNDPEEELRIALEEVAKIAR 154 (159)
T ss_dssp HHHHHHHHH-HSS-----GTT-----HHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCceEeecCC---CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 568888888 88887776554 6889999999999888766678888877777654
No 234
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=23.15 E-value=1.5e+02 Score=27.70 Aligned_cols=24 Identities=29% Similarity=0.517 Sum_probs=20.2
Q ss_pred ceeeccCc------hhHHHHHHhCcceeec
Q 042249 149 GFLSHCGW------NSVLESIVHGVPIIAW 172 (264)
Q Consensus 149 ~~ItHGG~------~si~eal~~GvP~l~~ 172 (264)
++++|.|- +.+.+|...++|+|++
T Consensus 66 v~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 66 AVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred EEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 77777774 4678999999999999
No 235
>PLN02727 NAD kinase
Probab=23.07 E-value=1.7e+02 Score=30.68 Aligned_cols=55 Identities=15% Similarity=0.113 Sum_probs=39.7
Q ss_pred CCCCccceeeccCchhHHHHHHh----CcceeecCCCchHHHHHHHHHhhcCceeEeeccCCCCCCHHHHHHHHHHHhcC
Q 042249 143 SHGSTGGFLSHCGWNSVLESIVH----GVPIIAWPLYAEQKMNAVLLTDDLKVAWRVKVNEDGLVGREEVATYARGLIQG 218 (264)
Q Consensus 143 ~~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 218 (264)
..++ ++|+=||-||++.|+.. ++|+|++-+ =-+|+... +..+++.+.|.+++.+
T Consensus 742 ~~~D--LVIvLGGDGTlLrAar~~~~~~iPILGINl--------------GrLGFLTd------i~~ee~~~~L~~Il~G 799 (986)
T PLN02727 742 ERVD--FVACLGGDGVILHASNLFRGAVPPVVSFNL--------------GSLGFLTS------HYFEDFRQDLRQVIHG 799 (986)
T ss_pred cCCC--EEEEECCcHHHHHHHHHhcCCCCCEEEEeC--------------CCcccccc------CCHHHHHHHHHHHHcC
Confidence 4567 99999999999999764 578877633 11333222 5678999999999976
Q ss_pred C
Q 042249 219 E 219 (264)
Q Consensus 219 ~ 219 (264)
.
T Consensus 800 ~ 800 (986)
T PLN02727 800 N 800 (986)
T ss_pred C
Confidence 3
No 236
>PF03693 RHH_2: Uncharacterised protein family (UPF0156); InterPro: IPR022789 This family of proteins are about 80 amino acids in length and their function is unknown. The proteins contain a conserved GRY motif. This family appears to be related to ribbon-helix-helix DNA-binding proteins. ; PDB: 3KXE_C.
Probab=23.05 E-value=1.7e+02 Score=20.73 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhh
Q 042249 205 REEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLE 260 (264)
Q Consensus 205 ~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 260 (264)
.+-|+.+|+. +. +-..+...|++.+.+..+.|.+...++++|++..++.+
T Consensus 30 SEvvR~aLRl-le-----~~e~~~~~Lr~~l~~g~~sG~~~~~~~~~~~~~~~~~~ 79 (80)
T PF03693_consen 30 SEVVREALRL-LE-----EREAKLEALREALQEGLESGESEPFDMDDILARARRKH 79 (80)
T ss_dssp HHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHCT-EESS--HHHHHHHCCH--
T ss_pred HHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHhhc
Confidence 3556666664 43 22345567888888777777776678889888776543
No 237
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=22.92 E-value=3.7e+02 Score=25.79 Aligned_cols=101 Identities=14% Similarity=0.084 Sum_probs=56.8
Q ss_pred hhccCCCCccceee--ccCchhH-HHHHHhCcc---eeecCCCchHHHHHHHHHhhcC-ceeEeeccCCCCCCHHHHHHH
Q 042249 139 IQVLSHGSTGGFLS--HCGWNSV-LESIVHGVP---IIAWPLYAEQKMNAVLLTDDLK-VAWRVKVNEDGLVGREEVATY 211 (264)
Q Consensus 139 ~~lL~~~~~~~~It--HGG~~si-~eal~~GvP---~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~l~~a 211 (264)
.+++..+++ ++|| ..|+|.+ .|.+++..+ ++++- ++.-| ... ++ .++.+++ .+.++++++
T Consensus 367 ~aly~~aDv-~lvTslrDGmNLva~Eyva~q~~~~GvLiLS----efaGa--a~~-L~~~al~VNP-----~d~~~~A~a 433 (474)
T PF00982_consen 367 LALYRAADV-ALVTSLRDGMNLVAKEYVACQDDNPGVLILS----EFAGA--AEQ-LSEAALLVNP-----WDIEEVADA 433 (474)
T ss_dssp HHHHHH-SE-EEE--SSBS--HHHHHHHHHS-TS--EEEEE----TTBGG--GGT--TTS-EEE-T-----T-HHHHHHH
T ss_pred HHHHHhhhh-EEecchhhccCCcceEEEEEecCCCCceEee----ccCCH--HHH-cCCccEEECC-----CChHHHHHH
Confidence 456666775 4554 6788865 688877665 22221 11111 223 56 4477766 689999999
Q ss_pred HHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHh
Q 042249 212 ARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKN 258 (264)
Q Consensus 212 i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 258 (264)
|.+.|+-+ .++-+.+.+++.+.+.. .....=.++|+++|++
T Consensus 434 i~~AL~M~-~~Er~~r~~~~~~~v~~-----~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 434 IHEALTMP-PEERKERHARLREYVRE-----HDVQWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHT---HHHHHHHHHHHHHHHHH-----T-HHHHHHHHHHHHHT
T ss_pred HHHHHcCC-HHHHHHHHHHHHHHhHh-----CCHHHHHHHHHHHhhC
Confidence 99999853 23566666677776664 4556666788888764
No 238
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=22.84 E-value=2.6e+02 Score=27.33 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=25.2
Q ss_pred CCCccceeeccCchhHHHHHHhCcceeecCCCc
Q 042249 144 HGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYA 176 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~ 176 (264)
.++ ++|+.||....... +..+|+|-+++.+
T Consensus 64 ~~d--viIsrG~ta~~i~~-~~~iPVv~i~~s~ 93 (538)
T PRK15424 64 RCD--AIIAAGSNGAYLKS-RLSVPVILIKPSG 93 (538)
T ss_pred CCc--EEEECchHHHHHHh-hCCCCEEEecCCH
Confidence 456 99999999988887 5679999999854
No 239
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=22.63 E-value=46 Score=28.31 Aligned_cols=22 Identities=9% Similarity=-0.028 Sum_probs=18.9
Q ss_pred cceeeccCchhHHHHHHhCcce
Q 042249 148 GGFLSHCGWNSVLESIVHGVPI 169 (264)
Q Consensus 148 ~~~ItHGG~~si~eal~~GvP~ 169 (264)
-++|+|||...+.-+...|+|.
T Consensus 177 vlvVsHg~vir~ll~~~~~~~~ 198 (228)
T PRK14116 177 VIIAAHGNSLRALTKYIENISD 198 (228)
T ss_pred EEEEcChHHHHHHHHHHhCCCH
Confidence 3899999999988888888774
No 240
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=22.57 E-value=1.6e+02 Score=28.90 Aligned_cols=27 Identities=15% Similarity=0.202 Sum_probs=21.8
Q ss_pred ccceeeccCc------hhHHHHHHhCcceeecC
Q 042249 147 TGGFLSHCGW------NSVLESIVHGVPIIAWP 173 (264)
Q Consensus 147 ~~~~ItHGG~------~si~eal~~GvP~l~~P 173 (264)
.+++++|.|- +.+.+|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 69 MGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3478888774 46789999999999996
No 241
>TIGR02836 spore_IV_A stage IV sporulation protein A. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis.
Probab=22.50 E-value=3.6e+02 Score=25.89 Aligned_cols=88 Identities=14% Similarity=0.183 Sum_probs=57.6
Q ss_pred CCCeEecccCC------------chhccC-CCCccceeeccCc--------------hhHHHHHHhCcceeecCCCch--
Q 042249 127 GVGLVVPSWAP------------QIQVLS-HGSTGGFLSHCGW--------------NSVLESIVHGVPIIAWPLYAE-- 177 (264)
Q Consensus 127 ~~nv~i~~~vp------------q~~lL~-~~~~~~~ItHGG~--------------~si~eal~~GvP~l~~P~~~D-- 177 (264)
.++++-++|.. -..++. |++++++||-.|. ..+.|.-..|+|.|++=-..|
T Consensus 114 k~RmV~TPW~d~~IPF~~AAeiGT~kVI~dhstIgivVtTDgsi~dI~Re~y~~aEe~~i~eLk~~~kPfiivlN~~dp~ 193 (492)
T TIGR02836 114 KPRMVSTPWYDYEIPFEEAAEIGTRKVIQEHSTIGVVVTTDGTITDIPREDYVEAEERVIEELKELNKPFIILLNSTHPY 193 (492)
T ss_pred ccccccCCcccccCchhhhhhhhHHHHHHhcCcEEEEEEcCCCccccccccchHHHHHHHHHHHhcCCCEEEEEECcCCC
Confidence 34566667753 335666 9999999995552 356777788999998754333
Q ss_pred ---HHHHHHHHHhhcCce-eEeeccCCCCCCHHHHHHHHHHHhc
Q 042249 178 ---QKMNAVLLTDDLKVA-WRVKVNEDGLVGREEVATYARGLIQ 217 (264)
Q Consensus 178 ---Q~~na~~v~~~~G~G-~~l~~~~~~~~~~~~l~~ai~~ll~ 217 (264)
...-+..+++..++- +.++-.+ ++.++|.+.++++|-
T Consensus 194 ~~et~~l~~~l~eky~vpvl~v~c~~---l~~~DI~~il~~vL~ 234 (492)
T TIGR02836 194 HPETEALRQELEEKYDVPVLAMDVES---MRESDILSVLEEVLY 234 (492)
T ss_pred CchhHHHHHHHHHHhCCceEEEEHHH---cCHHHHHHHHHHHHh
Confidence 222233444435654 3455554 789999999999974
No 242
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=22.21 E-value=1.1e+02 Score=28.96 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=36.8
Q ss_pred hCcceeecCCCchHHHHHH-HHHhhcCceeE--e-eccCCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 042249 165 HGVPIIAWPLYAEQKMNAV-LLTDDLKVAWR--V-KVNEDGLVGREEVATYARGLIQGEDGKLLRDKMRVLKDAAA 236 (264)
Q Consensus 165 ~GvP~l~~P~~~DQ~~na~-~v~~~~G~G~~--l-~~~~~~~~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~ 236 (264)
-|+|+|-+-+-.|-.-... ..++ .|.|-. + -.++.+.+++++|.+.|++.- .|.+--+++++++.
T Consensus 499 RGvpqIEVtFevDangiL~VsAeD-Kgtg~~~kitItNd~~rLt~EdIerMv~eAe------kFAeeDk~~Kekie 567 (663)
T KOG0100|consen 499 RGVPQIEVTFEVDANGILQVSAED-KGTGKKEKITITNDKGRLTPEDIERMVNEAE------KFAEEDKKLKEKIE 567 (663)
T ss_pred CCCccEEEEEEEccCceEEEEeec-cCCCCcceEEEecCCCCCCHHHHHHHHHHHH------HHhhhhHHHHHHHH
Confidence 3788887776555322211 1233 566632 1 123346699999999888763 45555555555543
No 243
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=22.05 E-value=1.8e+02 Score=18.02 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 042249 204 GREEVATYARGLIQGEDGKLLRDKMRVL 231 (264)
Q Consensus 204 ~~~~l~~ai~~ll~~~~~~~~r~~a~~l 231 (264)
+.++|..||..+.++. .++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4688999999998763 3677766653
No 244
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.78 E-value=89 Score=28.02 Aligned_cols=29 Identities=21% Similarity=0.201 Sum_probs=23.9
Q ss_pred CCCccceeeccCchhHHHHHHh----CcceeecCC
Q 042249 144 HGSTGGFLSHCGWNSVLESIVH----GVPIIAWPL 174 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~~----GvP~l~~P~ 174 (264)
.++ ++|+-||-||+++++.. ++|++++..
T Consensus 57 ~~d--~vi~~GGDGT~l~~~~~~~~~~~pv~gin~ 89 (305)
T PRK02645 57 LID--LAIVLGGDGTVLAAARHLAPHDIPILSVNV 89 (305)
T ss_pred CcC--EEEEECCcHHHHHHHHHhccCCCCEEEEec
Confidence 456 89999999999999864 788888754
No 245
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=21.76 E-value=2.9e+02 Score=26.91 Aligned_cols=30 Identities=13% Similarity=0.080 Sum_probs=24.7
Q ss_pred CCCccceeeccCchhHHHHHHhCcceeecCCCc
Q 042249 144 HGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYA 176 (264)
Q Consensus 144 ~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~ 176 (264)
.++ ++|+.||....... +..+|+|-+++.+
T Consensus 54 ~~d--viIsrG~ta~~i~~-~~~iPVv~i~~s~ 83 (526)
T TIGR02329 54 RCD--VVVAGGSNGAYLKS-RLSLPVIVIKPTG 83 (526)
T ss_pred CCc--EEEECchHHHHHHH-hCCCCEEEecCCh
Confidence 356 99999998888887 5579999999854
No 246
>PRK06932 glycerate dehydrogenase; Provisional
Probab=21.65 E-value=3.8e+02 Score=24.03 Aligned_cols=58 Identities=22% Similarity=0.340 Sum_probs=38.7
Q ss_pred cCCchhccCCCCccceeeccCchhHHHHHHhCcceeecCCCch--HHHHHHHHHhhcCce-eEeeccCCCCCCHHHHHHH
Q 042249 135 WAPQIQVLSHGSTGGFLSHCGWNSVLESIVHGVPIIAWPLYAE--QKMNAVLLTDDLKVA-WRVKVNEDGLVGREEVATY 211 (264)
Q Consensus 135 ~vpq~~lL~~~~~~~~ItHGG~~si~eal~~GvP~l~~P~~~D--Q~~na~~v~~~~G~G-~~l~~~~~~~~~~~~l~~a 211 (264)
+.+...+|+.++ +++.|+ |+..+ ...|+..+.. ++=| +.++....+.++.+.|.++
T Consensus 188 ~~~l~ell~~sD--iv~l~~------------------Plt~~T~~li~~~~l~~-mk~ga~lIN~aRG~~Vde~AL~~a 246 (314)
T PRK06932 188 YTPFEEVLKQAD--IVTLHC------------------PLTETTQNLINAETLAL-MKPTAFLINTGRGPLVDEQALLDA 246 (314)
T ss_pred cCCHHHHHHhCC--EEEEcC------------------CCChHHhcccCHHHHHh-CCCCeEEEECCCccccCHHHHHHH
Confidence 567788999999 787775 54432 3567777777 6544 4445554446777777777
Q ss_pred HH
Q 042249 212 AR 213 (264)
Q Consensus 212 i~ 213 (264)
++
T Consensus 247 L~ 248 (314)
T PRK06932 247 LE 248 (314)
T ss_pred HH
Confidence 66
No 247
>PRK13337 putative lipid kinase; Reviewed
Probab=21.54 E-value=3.1e+02 Score=24.18 Aligned_cols=26 Identities=12% Similarity=0.037 Sum_probs=21.4
Q ss_pred ceeeccCchhHHHHHHh------CcceeecCC
Q 042249 149 GFLSHCGWNSVLESIVH------GVPIIAWPL 174 (264)
Q Consensus 149 ~~ItHGG~~si~eal~~------GvP~l~~P~ 174 (264)
++|..||=||+.|++.. ..|+-++|.
T Consensus 60 ~vvv~GGDGTl~~vv~gl~~~~~~~~lgiiP~ 91 (304)
T PRK13337 60 LVIAAGGDGTLNEVVNGIAEKENRPKLGIIPV 91 (304)
T ss_pred EEEEEcCCCHHHHHHHHHhhCCCCCcEEEECC
Confidence 89999999999988762 357888996
No 248
>TIGR03754 conj_TOL_TraD conjugative coupling factor TraD, TOL family. Members of this protein are assigned by homology to the TraD family of conjugative coupling factor. This particular clade serves as a marker for an extended gene region that occurs occasionally on plasmids, including the toluene catabolism TOL plasmid. More commonly, the gene region is chromosomal, flanked by various markers of conjugative transfer and insertion.
Probab=21.47 E-value=1.1e+02 Score=30.65 Aligned_cols=27 Identities=11% Similarity=0.343 Sum_probs=21.0
Q ss_pred ChhhHHHhhccCCCCcEEEEEecCCCC
Q 042249 40 DRTDCLKWLDDQPNGSVLFVCFGSGGS 66 (264)
Q Consensus 40 ~~~~~~~wl~~~~~~~vVyvs~GS~~~ 66 (264)
++.++.+|.+--..+.+|||.+.|+..
T Consensus 425 D~rpi~d~~~vi~~k~IlYvgLdsLs~ 451 (643)
T TIGR03754 425 DPRPIFDWMQVIRKKGIVYVGLDALSD 451 (643)
T ss_pred CccccccHHHHhhCCcEEEEEcCCCCc
Confidence 456778888855566799999999874
No 249
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=21.35 E-value=78 Score=28.45 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=28.9
Q ss_pred ccCCCCccceeeccCchhHHHHHH----hCcceeecCCCch
Q 042249 141 VLSHGSTGGFLSHCGWNSVLESIV----HGVPIIAWPLYAE 177 (264)
Q Consensus 141 lL~~~~~~~~ItHGG~~si~eal~----~GvP~l~~P~~~D 177 (264)
.|..-.+..+|.=||-+|..-|.. +++|+|++|-.-|
T Consensus 86 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 86 NLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 455556779999999999877643 7999999997554
No 250
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=20.66 E-value=4.9e+02 Score=21.47 Aligned_cols=49 Identities=20% Similarity=0.282 Sum_probs=27.5
Q ss_pred CCcHHHHHHHHhhhhccCCCCCeEe--ecccccCCCCCCCChhhHHHhhc----cCCCCcEEEEE
Q 042249 2 DLEPGAFKALMKSRESSFRLPPVYP--VGPLILTGSINESDRTDCLKWLD----DQPNGSVLFVC 60 (264)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~p~~~~--vGpl~~~~~~~~~~~~~~~~wl~----~~~~~~vVyvs 60 (264)
-||++..+++.+ ..+.++. +||= . ......+.+..|++ .+|+.|+|+|+
T Consensus 46 ~le~~~a~~ia~------~~a~~~~ld~~~N--~--~~~~~~~~~~~fv~~iR~~hP~tPIllv~ 100 (178)
T PF14606_consen 46 KLEPEVADLIAE------IDADLIVLDCGPN--M--SPEEFRERLDGFVKTIREAHPDTPILLVS 100 (178)
T ss_dssp S--HHHHHHHHH------S--SEEEEEESHH--C--CTTTHHHHHHHHHHHHHTT-SSS-EEEEE
T ss_pred ccCHHHHHHHhc------CCCCEEEEEeecC--C--CHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 379999999998 4445553 4444 1 11123455556665 57789999998
No 251
>PRK13463 phosphatase PhoE; Provisional
Probab=20.62 E-value=58 Score=26.99 Aligned_cols=23 Identities=22% Similarity=0.164 Sum_probs=19.3
Q ss_pred cceeeccCchhHHHHHHhCccee
Q 042249 148 GGFLSHCGWNSVLESIVHGVPII 170 (264)
Q Consensus 148 ~~~ItHGG~~si~eal~~GvP~l 170 (264)
-++|+|||...+.-+...|.|.-
T Consensus 146 vlvVsHg~~ir~~~~~~~~~~~~ 168 (203)
T PRK13463 146 ILIVSHAAAAKLLVGHFAGIEIE 168 (203)
T ss_pred EEEEeChHHHHHHHHHHhCCCHH
Confidence 38999999999888888887764
No 252
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=20.48 E-value=2.1e+02 Score=27.80 Aligned_cols=26 Identities=27% Similarity=0.464 Sum_probs=21.1
Q ss_pred ceeeccCc------hhHHHHHHhCcceeecCC
Q 042249 149 GFLSHCGW------NSVLESIVHGVPIIAWPL 174 (264)
Q Consensus 149 ~~ItHGG~------~si~eal~~GvP~l~~P~ 174 (264)
++++|.|- +.+.+|-..++|+|++.-
T Consensus 75 v~~vt~GpG~~N~l~~i~~A~~~~~Pvl~IsG 106 (568)
T PRK07449 75 AVIVTSGTAVANLYPAVIEAGLTGVPLIVLTA 106 (568)
T ss_pred EEEECCccHHHhhhHHHHHHhhcCCcEEEEEC
Confidence 67777774 478999999999999953
No 253
>PF10897 DUF2713: Protein of unknown function (DUF2713); InterPro: IPR020404 This entry contains proteins with no known function. In some organisms this represents the C-terminal domain of a fusion protein with YjbL.
Probab=20.32 E-value=1.9e+02 Score=24.46 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhhc
Q 042249 203 VGREEVATYARGLIQGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLEN 261 (264)
Q Consensus 203 ~~~~~l~~ai~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~~ 261 (264)
-...-|...++.+-. +.|+++.+++++.+- +| ..+++.++++++++.+
T Consensus 145 ycenyit~q~k~LSq----q~MKK~L~eMK~Lad-----~g--eldFn~iL~~Mk~~~~ 192 (246)
T PF10897_consen 145 YCENYITSQFKILSQ----QDMKKNLGEMKRLAD-----KG--ELDFNDILDKMKLQVN 192 (246)
T ss_pred hhHHHHHHHHHHHHH----HHHHHHHHHHHHhhh-----cC--CCcHHHHHHHHHHhhc
Confidence 455667777777654 379999998888765 33 3688899999988764
No 254
>PF13779 DUF4175: Domain of unknown function (DUF4175)
Probab=20.21 E-value=3e+02 Score=28.52 Aligned_cols=59 Identities=22% Similarity=0.230 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHHh------cCCchHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHhhhcc
Q 042249 203 VGREEVATYARGLI------QGEDGKLLRDKMRVLKDAAANALSPDGFSTKSLANVAQKWKNLEND 262 (264)
Q Consensus 203 ~~~~~l~~ai~~ll------~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~~~~~ 262 (264)
.+.+.+.+.+..+. +|.+...-.++.+.-.+.+++|++. |.|...|++++++|++.+++
T Consensus 443 ~~~~~~~~v~~~LW~lAl~iEdG~ls~A~~~Lr~AQe~L~eAL~~-gAs~eEI~rLm~eLR~A~~~ 507 (820)
T PF13779_consen 443 RTDEALREVADLLWDLALRIEDGDLSDAERRLRAAQEALREALER-GASDEEIARLMQELREAMQD 507 (820)
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHH
Confidence 35556666555553 3544455666667777777777755 56689999999999887643
Done!