BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042252
MVYFHDIPDEVIDNLIEEGITFNVAGGLMLEHPLTLPFVEAVVGATDTVMGLSKALTEKL
IWEAQQQ

High Scoring Gene Products

Symbol, full name Information P value
AT5G66550 protein from Arabidopsis thaliana 7.5e-18
DDB_G0281937
maf family protein 		gene from Dictyostelium discoideum 1.3e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042252
        (67 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2154895 - symbol:AT5G66550 "AT5G66550" species...   217  7.5e-18   1
DICTYBASE|DDB_G0281937 - symbol:DDB_G0281937 "maf family ...   112  1.3e-06   1


>TAIR|locus:2154895 [details] [associations]
            symbol:AT5G66550 "AT5G66550" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM;IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR003697 Pfam:PF02545 PIRSF:PIRSF006305 EMBL:CP002688
            GO:GO:0009507 KO:K06287 IPI:IPI00545794 RefSeq:NP_201456.2
            UniGene:At.26501 ProteinModelPortal:F4K0M7 SMR:F4K0M7 PRIDE:F4K0M7
            EnsemblPlants:AT5G66550.1 GeneID:836787 KEGG:ath:AT5G66550
            OMA:KAIRTEK Uniprot:F4K0M7
        Length = 207

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 40/60 (66%), Positives = 49/60 (81%)

Query:     2 VYFHDIPDEVIDNLIEEGITFNVAGGLMLEHPLTLPFVEAVVGATDTVMGLSKALTEKLI 61
             VYFH+IP++VID LI++ IT+ VAGGL LEHPL  PF+++VVG  DTVMGL K LTEK I
Sbjct:   143 VYFHEIPEQVIDGLIDDAITYKVAGGLTLEHPLISPFIDSVVGGVDTVMGLPKELTEKFI 202


>DICTYBASE|DDB_G0281937 [details] [associations]
            symbol:DDB_G0281937 "maf family protein"
            species:44689 "Dictyostelium discoideum" [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR003697 Pfam:PF02545
            PIRSF:PIRSF006305 dictyBase:DDB_G0281937 GO:GO:0005737
            EMBL:AAFI02000043 KO:K06287 eggNOG:COG0424 RefSeq:XP_640464.1
            ProteinModelPortal:Q54TC5 EnsemblProtists:DDB0267059 GeneID:8623277
            KEGG:ddi:DDB_G0281937 OMA:LITCDQV Uniprot:Q54TC5
        Length = 197

 Score = 112 (44.5 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 25/64 (39%), Positives = 36/64 (56%)

Query:     3 YFHDIPDEVIDNLIEEGITFNVAGGLMLEHPLTLPFVEAVVGATDTVMGLSKALTEKLIW 62
             +F  I DE ID LI++G   + AGG  +EH     F   + G  +T++GL K LT+ LI 
Sbjct:   136 HFKKISDEFIDKLIKQGDVMHCAGGFTVEH--MADFTLQLEGEVETILGLPKTLTKNLIS 193

Query:    63 EAQQ 66
             +  Q
Sbjct:   194 QVSQ 197


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       67        67   0.00091  102 3  11 22  0.44    28
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  468 (50 KB)
  Total size of DFA:  86 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.09u 0.24s 8.33t   Elapsed:  00:00:00
  Total cpu time:  8.09u 0.24s 8.33t   Elapsed:  00:00:00
  Start:  Thu May  9 23:35:39 2013   End:  Thu May  9 23:35:39 2013

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