BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042255
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZQ23|FLA3_ARATH Fasciclin-like arabinogalactan protein 3 OS=Arabidopsis thaliana
GN=FLA3 PE=2 SV=1
Length = 280
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 176/283 (62%), Gaps = 15/283 (5%)
Query: 1 MELKASSSLVVLTALVLLFSSSSVSVNGFDIIKILSNHPNLLAFSDLLSQTKLNEAINKR 60
M LK SSSL+ LT +L + SS+ V+ +I ++L +P ++LL++T+L INKR
Sbjct: 1 MGLKVSSSLLCLT---ILLAVSSI-VSAVNITRVLEKYPEFSTMTELLAKTELTPIINKR 56
Query: 61 KTITVLAVDNSSIGGLNDRPVDEIKNILSVHVILDYYDMNKLKKLPKTSS-WTTMFQSTG 119
+TITVLA++N +IG ++ RP +E+KNIL HV+LDY+D KLK L + S+ TT++QSTG
Sbjct: 57 QTITVLALNNDAIGSISGRPEEEVKNILMNHVVLDYFDELKLKALKEKSTLLTTLYQSTG 116
Query: 120 NANDKQGYINCTRLPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPIVAPGLG 179
+ G++NCT+ G+ + FGS VK +P A+++ +VF P+N+SV+Q+S PIVAPGLG
Sbjct: 117 LGQQQNGFLNCTKSNGKIY-FGSGVKGAPQTAEYITTVFRNPYNLSVVQISMPIVAPGLG 175
Query: 180 DVILPPPPPPYTPPPAMPPKASRKKSNASAPVAEGDDDE----FAPSDSPIEAPVEAPAP 235
+ PPPPP + PPA PK + EGD + AP +P AP E+ +P
Sbjct: 176 SPVKVPPPPPMSSPPAPSPKKGAATPAPAP-ADEGDYADAPPGLAPETAPASAPSESDSP 234
Query: 236 EPVEAPAQSPPEPKDEA-EAPAPSSASRLYLASGVALA-GFTA 276
P AP +S + A EA PSSAS L+ G L GF A
Sbjct: 235 AP--APDKSGKKKMAAADEAEPPSSASNTGLSFGAVLVLGFVA 275
>sp|O49586|FLA5_ARATH Fasciclin-like arabinogalactan protein 5 OS=Arabidopsis thaliana
GN=FLA5 PE=2 SV=1
Length = 278
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 139/265 (52%), Gaps = 24/265 (9%)
Query: 26 VNGFDIIKILSNHPNLLAFSDLLSQTKLNEAINKRKTITVLAVDNSSIGGLNDRPVDEIK 85
V +I + DL +TKL AI+K +TITVLAV N +I + +R E++
Sbjct: 22 VTANNITLAFQKYSKFSTMRDLFIKTKLIAAIDKYQTITVLAVSNDAISSITNRSEVELR 81
Query: 86 NILSVHVILDYYDMNKLKKL-PKTSSWTTMFQSTGNANDKQGYINCTRLPGEQFVFGSSV 144
NIL HVILDYYD KL+ + K+ TT++Q+TG G++N ++ G + FGS V
Sbjct: 82 NILMTHVILDYYDELKLQGMREKSIMLTTLYQTTGLGEQMNGFLNVSKSKGRVY-FGSEV 140
Query: 145 KNSPPVAKFVKSVFSQPFNISVLQVSQPIVAPGLGDVILPPPPP-----PYTPP------ 193
KNSP A++V +V+ P+N+S++Q++ PIVAPGL I PPPPP PY P
Sbjct: 141 KNSPLNAEYVSTVYHNPYNLSIIQITMPIVAPGLSLAIFPPPPPYVHVAPYPTPMDASVV 200
Query: 194 PAMPPKASRKKSNASAPVAEGDDDEFAPSDSPIEAPVEAPAP----EPVEAPAQSPPEPK 249
PA P A +++ P AP+ EA APAP E +EA ++ +P
Sbjct: 201 PAPGPAADDNSPDSAVPKTPP-----APATDTPEADSPAPAPSADNEKIEAADKA--KPS 253
Query: 250 DEAEAPAPSSASRLYLASGVALAGF 274
A S L LA + AGF
Sbjct: 254 SSASKAGWSFDVILLLAFLASFAGF 278
>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana
GN=FLA2 PE=1 SV=1
Length = 403
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 113/176 (64%), Gaps = 7/176 (3%)
Query: 4 KASSSLVVLTALVLLFSSSSVSVNGFDIIKILSNHPNLLAFSDLLSQTKLNEAINKRKTI 63
+A+++LV++ L L S S N +I +IL+ P+ F+ LS T L + IN+R+TI
Sbjct: 6 RAATALVLIFQLHLFLSLS----NAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTI 61
Query: 64 TVLAVDNSSIGGL--NDRPVDEIKNILSVHVILDYYDMNKLKKLPKTSSWT-TMFQSTGN 120
TVLAVDNS++ + N + +I+NILS+HV++DY+ KL ++ S+ T +MFQSTG+
Sbjct: 62 TVLAVDNSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGS 121
Query: 121 ANDKQGYINCTRLPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPIVAP 176
A GYIN T + G + FG +S A +VKSVF +P+NISVL +SQ + +P
Sbjct: 122 ATGTSGYINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSP 177
>sp|Q9LTW9|FLA14_ARATH Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana
GN=FLA14 PE=2 SV=1
Length = 255
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 133/252 (52%), Gaps = 22/252 (8%)
Query: 6 SSSLVVLT---ALVLLFSSSSVSVNGFDIIKILSNHPNLLAFSDLLSQTKLNEAINKRKT 62
SSSL + A L++SS N F+I IL+ H + F+ LLS+T+L INKR+T
Sbjct: 2 SSSLTIFFFFFASTFLYTSS----NSFNITNILNEHDDFSNFNQLLSETQLASTINKRQT 57
Query: 63 ITVLAVDNSSIGGLNDRPVDEIKNILSVHVILDYYDMNKLKKL-PKTSSWTTMFQSTGNA 121
ITVL V N ++ L+ +P IK ILS+H++LDYYD KLK L KT TT+FQS+G A
Sbjct: 58 ITVLVVSNGALSSLSGQPTSVIKKILSLHIVLDYYDQKKLKNLSKKTVLLTTLFQSSGLA 117
Query: 122 NDKQGYINCTRLPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPIVAPGLGDV 181
+QG++N T + FGS+V S A+ +V + PFNISVL +S I+ GD
Sbjct: 118 RGQQGFLNATVMKNGDVAFGSAVPGSSLDAQLQDTVAALPFNISVLHISSAIMIDVKGD- 176
Query: 182 ILPPPPPPYTPPPAMPPKASRKKSNASAPVAEGDDDEFAPSDSPIEAPVEAPAPEPVEAP 241
P + S A +P +G D + PS +P A A EP E
Sbjct: 177 --------NAPTASPLSPVSSPPRPAESPNDDGQDFDEPPSSAP-----GAAADEPSENA 223
Query: 242 AQSPPEPKDEAE 253
+ +++++
Sbjct: 224 GSANGVSRNDSQ 235
>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana
GN=FLA8 PE=1 SV=1
Length = 420
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 114/183 (62%), Gaps = 9/183 (4%)
Query: 8 SLVVLTALVLLFSSSSVSVNGFDIIKILSNHPNLLAFSDLLSQTKLNEAINKRKTITVLA 67
SL+ T +L F+S+ V+ +I +IL++ P+ +F+ LSQTKL + IN R TITVL
Sbjct: 8 SLLAFTFSLLAFAST---VSSHNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLV 64
Query: 68 VDNSSIGGL-NDRPVDEIKNILSVHVILDYYDMNKLKKLPK-TSSWTTMFQSTGNANDKQ 125
++N ++ L P+ IK+ LS+ V+LDYYD KL K+ K T+ TT++Q+TGNA
Sbjct: 65 LNNGAMSALAGKHPLSVIKSALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTTGNAPGNL 124
Query: 126 GYINCTRLPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPIVAPGLGDVILPP 185
G++N T L G + FGS+ S + + KSV P+NIS+L++ PI+APG +L
Sbjct: 125 GFVNITDLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPG----VLTA 180
Query: 186 PPP 188
P P
Sbjct: 181 PAP 183
>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana
GN=FLA10 PE=1 SV=1
Length = 422
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 115/186 (61%), Gaps = 6/186 (3%)
Query: 5 ASSSLVVLTALVLLFSSSSVSVNGFDIIKILSNHPNLLAFSDLLSQTKLNEAINKRKTIT 64
A+S L A L + + +V+G +I +ILS+ P +F++ LSQTKL + IN R TIT
Sbjct: 2 ATSRAFTLFAFTLSLLTVASTVSGHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTIT 61
Query: 65 VLAVDNSSIGGL-NDRPVDEIKNILSVHVILDYYDMNKLKKLPK-TSSWTTMFQSTGNAN 122
VL ++N ++ L P+ +KN LS+ V+LDYYD KL +L K T+ TT++Q+TG+A
Sbjct: 62 VLVLNNGAMSSLAGKHPLSVVKNALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTTGHAL 121
Query: 123 DKQGYINCTRLPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPIVAPGLGDVI 182
G++N T L G + FGS+ S + + KSV P+NISVL+++ PI+APG I
Sbjct: 122 GNLGFVNVTDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPG----I 177
Query: 183 LPPPPP 188
L P P
Sbjct: 178 LTAPAP 183
>sp|Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana
GN=FLA1 PE=1 SV=1
Length = 424
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 96/154 (62%), Gaps = 5/154 (3%)
Query: 23 SVSVNGFDIIKILSNHPNLLAFSDLLSQTKLNEAINKRKTITVLAVDNSSIGGLNDR--P 80
+ + ++ ++L+NHP+ +FS L+QT L + IN+R+TITV AVDN+++ L +
Sbjct: 19 TTQTHAHNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYT 78
Query: 81 VDEIKNILSVHVILDYYDMNKLKKLPKTSSW-TTMFQSTGNANDKQGYINCTRLPGEQFV 139
+ +KNILS+HV+LDY+ KL ++ S+ T+FQ+TG A G++N T L G +
Sbjct: 79 LSTLKNILSLHVLLDYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITDLRGGKVG 138
Query: 140 FGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPI 173
FG + FVKS+ P+NIS++Q+S+ +
Sbjct: 139 FGPDGGDLSSF--FVKSIEEVPYNISIIQISRVL 170
>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana
GN=FLA4 PE=1 SV=1
Length = 420
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 15/178 (8%)
Query: 30 DIIKILSNHPNLLAFSDLLSQTKLNEAINKRKTITVLAVDNSSIGG----LNDR-PVDEI 84
++ +LS+ PNL +FS+LL + + ++ R ++T+LAV NS L R P +
Sbjct: 30 NVTAVLSSFPNLSSFSNLLVSSGIAAELSGRNSLTLLAVPNSQFSSASLDLTRRLPPSAL 89
Query: 85 KNILSVHVILDYYDMNKLKKL-PKTSSWTTMFQSTGNANDKQGYINCTRLPGEQFV-FGS 142
++L HV+L + + L+++ P S+ TT+++++G G +N TR P V GS
Sbjct: 90 ADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASGSVTIGS 149
Query: 143 SVKNSPPVAKFVKSVFSQPFNISVLQVSQPIVAPGL----GDVILPPPP-PPYTPPPA 195
+ V K ++ ++P NI+VL V IV G+ + + PPP +PPPA
Sbjct: 150 PATKNVTVLKLLE---TKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPPPA 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,331,385
Number of Sequences: 539616
Number of extensions: 5307788
Number of successful extensions: 71564
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 1626
Number of HSP's that attempted gapping in prelim test: 39096
Number of HSP's gapped (non-prelim): 16920
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)