Query 042255
Match_columns 280
No_of_seqs 155 out of 474
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 07:13:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042255.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042255hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w7d_A Fasciclin-like protein; 99.8 2.6E-20 9E-25 153.8 5.5 127 28-177 2-137 (137)
2 2vxp_A Transforming growth fac 99.8 6.9E-19 2.4E-23 144.4 10.5 124 29-174 2-132 (132)
3 1nyo_A Immunogenic protein MPT 99.8 2.1E-19 7.2E-24 153.2 6.5 125 28-177 27-163 (163)
4 1o70_A Fasciclin I, FAS I, FCN 99.7 5.5E-18 1.9E-22 157.0 8.7 140 26-177 3-158 (324)
5 1o70_A Fasciclin I, FAS I, FCN 99.6 2.2E-16 7.4E-21 146.3 5.3 136 29-179 159-313 (324)
6 1hcw_A BBA1; growth response p 9.9 1.3E+02 0.0043 17.7 1.4 12 81-92 12-23 (26)
7 3ygs_P Procaspase 9; apoptosis 6.4 3.5E+02 0.012 19.9 2.9 28 31-58 59-91 (97)
8 1l4z_B Streptokinase; plasmino 5.8 3.8E+02 0.013 21.7 2.9 69 58-142 44-118 (136)
9 1l4d_B Streptokinase; plasmino 5.3 4.2E+02 0.014 21.1 2.8 69 57-142 29-104 (122)
10 3uw0_A Pectinesterase; right-h 5.0 1.6E+02 0.0056 27.5 0.3 26 27-52 29-55 (364)
No 1
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.80 E-value=2.6e-20 Score=153.76 Aligned_cols=127 Identities=13% Similarity=0.140 Sum_probs=100.2
Q ss_pred ccCHHHHHhcCCCcHHHHHHHHhcchHHHHhcCCCeEEEeeCCccccCCCC-----C----CHHHHHHHHhhcccccccC
Q 042255 28 GFDIIKILSNHPNLLAFSDLLSQTKLNEAINKRKTITVLAVDNSSIGGLND-----R----PVDEIKNILSVHVILDYYD 98 (280)
Q Consensus 28 a~NIt~iL~~~p~fStF~~LL~~T~L~~~Ln~~~~iTVfAPtN~Af~aL~~-----l----~~~~l~~lL~yHVl~~y~~ 98 (280)
..||.++|++.++||+|.++|+++|+.+.|++.+++|||||+|+||.+|.. + +.++++++|+|||++++|.
T Consensus 2 ~~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~ 81 (137)
T 1w7d_A 2 TGDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVM 81 (137)
T ss_dssp CSTTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCC
T ss_pred CCCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEc
Confidence 358999999999999999999999999999999999999999999999853 2 5789999999999999999
Q ss_pred hhhhccCCCCCceeeecccCCCCCCCCceEEEEeCCCCeEEEeCCCCCCCCceEEeeeeeecccceEEEEeCccccCCC
Q 042255 99 MNKLKKLPKTSSWTTMFQSTGNANDKQGYINCTRLPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPIVAPG 177 (280)
Q Consensus 99 ~~~L~~l~~~~~ltTL~qatG~A~~~~G~vnvT~~~G~~V~~~S~~~gs~~~atvvksv~~~P~~lsV~qVd~vLlP~~ 177 (280)
..+|.. +..++||. +..++|+.. |+ +.|.. ++|++.-. .-.|..|+.||+||+|+.
T Consensus 82 ~~~l~~---~~~~~tl~---------G~~l~v~~~-~g-v~vn~--------a~v~~~di-~~~NGvIHvID~VL~P~s 137 (137)
T 1w7d_A 82 SSDLTE---GMTAETVE---------GGALTVTLE-GG-PKVNG--------VSISQPDV-DASNGVIHVIDGVLMPGA 137 (137)
T ss_dssp TTTSCS---SEEEECTT---------SCEEEEECT-TS-CEETT--------EECSBCCC-BCSSSEEEBCSSCCSSCC
T ss_pred HHHhcC---CCeeeccC---------CceEEEEec-CC-EEEeC--------cEEEECCe-ecCCeEEEEECeeeCCCC
Confidence 888754 22266652 235778765 44 77742 55555421 235777888899999973
No 2
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.78 E-value=6.9e-19 Score=144.40 Aligned_cols=124 Identities=13% Similarity=0.137 Sum_probs=96.4
Q ss_pred cCHHHHHhcCCCcHHHHHHHHhcchHHHHhcCCCeEEEeeCCccccCCCC-------CCHHHHHHHHhhcccccccChhh
Q 042255 29 FDIIKILSNHPNLLAFSDLLSQTKLNEAINKRKTITVLAVDNSSIGGLND-------RPVDEIKNILSVHVILDYYDMNK 101 (280)
Q Consensus 29 ~NIt~iL~~~p~fStF~~LL~~T~L~~~Ln~~~~iTVfAPtN~Af~aL~~-------l~~~~l~~lL~yHVl~~y~~~~~ 101 (280)
.||.++|++.++||+|.++|+++|+.+.|++.+++|||||+|+||++|.. .+.++++++|+|||+++.+...+
T Consensus 2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~ 81 (132)
T 2vxp_A 2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGG 81 (132)
T ss_dssp CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTT
T ss_pred ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhh
Confidence 37999999999999999999999999999999999999999999999853 27889999999999999887777
Q ss_pred hccCCCCCceeeecccCCCCCCCCceEEEEeCCCCeEEEeCCCCCCCCceEEeeeeeecccceEEEEeCcccc
Q 042255 102 LKKLPKTSSWTTMFQSTGNANDKQGYINCTRLPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPIV 174 (280)
Q Consensus 102 L~~l~~~~~ltTL~qatG~A~~~~G~vnvT~~~G~~V~~~S~~~gs~~~atvvksv~~~P~~lsV~qVd~vLl 174 (280)
|.. +..++||. +..+.|+..+|+ +.+.. ++|++.-.. -.|..|+-||+||+
T Consensus 82 l~~---~~~~~tl~---------G~~l~v~~~~~~-v~vn~--------a~v~~~di~-a~NGvIHvID~VLl 132 (132)
T 2vxp_A 82 IGA---LVRLKSLQ---------GDKLEVSLKNNV-VSVNK--------EPVAEPDIM-ATNGVVHVITNVLQ 132 (132)
T ss_dssp CSS---CEEEEBTT---------SSEEEEEEETTE-EEESS--------CBEEEEEEE-ETTEEEEEESSCC-
T ss_pred ccC---CceEecCC---------CCEEEEEEeCCE-EEEec--------cEEEEccee-cCCEEEEEECcEeC
Confidence 642 22267752 235788765554 88742 345553222 35788888899985
No 3
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.77 E-value=2.1e-19 Score=153.17 Aligned_cols=125 Identities=22% Similarity=0.283 Sum_probs=100.8
Q ss_pred ccCHHHHHhcCCCcHHHHHHHH-----hcchHHHHhcCCCeEEEeeCCccccCCCC-------CCHHHHHHHHhhccccc
Q 042255 28 GFDIIKILSNHPNLLAFSDLLS-----QTKLNEAINKRKTITVLAVDNSSIGGLND-------RPVDEIKNILSVHVILD 95 (280)
Q Consensus 28 a~NIt~iL~~~p~fStF~~LL~-----~T~L~~~Ln~~~~iTVfAPtN~Af~aL~~-------l~~~~l~~lL~yHVl~~ 95 (280)
..||.++|+++++||+|.++|+ ++||.++|++.+ +|||||+|+||.+|.. .+.+++++||+|||+++
T Consensus 27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g 105 (163)
T 1nyo_A 27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG 105 (163)
T ss_dssp HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEES
T ss_pred CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECC
Confidence 4589999999999999999999 999999999988 9999999999999852 15678999999999999
Q ss_pred ccChhhhccCCCCCceeeecccCCCCCCCCceEEEEeCCCCeEEEeCCCCCCCCceEEeeeeeecccceEEEEeCccccC
Q 042255 96 YYDMNKLKKLPKTSSWTTMFQSTGNANDKQGYINCTRLPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQVSQPIVA 175 (280)
Q Consensus 96 y~~~~~L~~l~~~~~ltTL~qatG~A~~~~G~vnvT~~~G~~V~~~S~~~gs~~~atvvksv~~~P~~lsV~qVd~vLlP 175 (280)
+|...+|. +.++||. | ..++|+..+|+ |.|.. ++|++.-. .-.|..|+.||+||+|
T Consensus 106 ~~~~~~l~-----g~~~Tl~---G------~~l~v~~~~~~-v~vn~--------a~V~~~di-~a~NGvIHvID~VL~P 161 (163)
T 1nyo_A 106 QTSPANVV-----GTRQTLQ---G------ASVTVTGQGNS-LKVGN--------ADVVCGGV-STANATVYMIDSVLMP 161 (163)
T ss_dssp CCCTTTSC-----EEEECTT---S------SEEEEEECSSC-EEETT--------EECSSBCC-CCSSEEEBCBSSCCCC
T ss_pred EEcHHHhC-----CccccCC---C------CEEEEEEECCE-EEEec--------cEEEECce-EcCCEEEEEECcEeCC
Confidence 99998875 2377752 2 36888876555 88742 55665422 2368888888999999
Q ss_pred CC
Q 042255 176 PG 177 (280)
Q Consensus 176 ~~ 177 (280)
+.
T Consensus 162 ~~ 163 (163)
T 1nyo_A 162 PA 163 (163)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 4
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.73 E-value=5.5e-18 Score=156.98 Aligned_cols=140 Identities=18% Similarity=0.247 Sum_probs=97.1
Q ss_pred CCccCHHHHHh------cCCCcHHHHHHHHhcc--hHHHHhcCCCeEEEeeCCccccCCC--C--CCHHHHHHHHhhccc
Q 042255 26 VNGFDIIKILS------NHPNLLAFSDLLSQTK--LNEAINKRKTITVLAVDNSSIGGLN--D--RPVDEIKNILSVHVI 93 (280)
Q Consensus 26 a~a~NIt~iL~------~~p~fStF~~LL~~T~--L~~~Ln~~~~iTVfAPtN~Af~aL~--~--l~~~~l~~lL~yHVl 93 (280)
+...||+++|+ ++++||+|.++|+++| |.++|++++++|||||+|+||.++. . .+.+.++++|+|||+
T Consensus 3 ~~~~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv 82 (324)
T 1o70_A 3 AADTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHII 82 (324)
T ss_dssp ----------------CCHHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEE
T ss_pred eehhhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEe
Confidence 45679999998 6789999999999999 9999999999999999999998763 2 378999999999999
Q ss_pred ccccChhhhccCCCC-C-ceeeecccCCCCCCCCceEEEEeC-CCCeEEEeCCCCCCCCceEEeeeeeecc-cceEEEEe
Q 042255 94 LDYYDMNKLKKLPKT-S-SWTTMFQSTGNANDKQGYINCTRL-PGEQFVFGSSVKNSPPVAKFVKSVFSQP-FNISVLQV 169 (280)
Q Consensus 94 ~~y~~~~~L~~l~~~-~-~ltTL~qatG~A~~~~G~vnvT~~-~G~~V~~~S~~~gs~~~atvvksv~~~P-~~lsV~qV 169 (280)
+++|...+|+...++ . .++||.+.. ..+++++.. ++..|.+..+ ..+++|++. +.+ .|..|+.|
T Consensus 83 ~g~~~~~~l~~~~~~~~~~~~Tl~g~~------~l~~~v~~~~~~~~v~v~~g----~~~a~v~~~--di~~~NGvIhvI 150 (324)
T 1o70_A 83 KDRLNVDKIRQKNANLIAQVPTVNNNT------FLYFNVRGEGSDTVITVEGG----GVNATVIQA--DVAQTNGYVHII 150 (324)
T ss_dssp SSCCCHHHHHHHTSSSCCCEEBSSTTC------EEEEEEESCGGGCEEEEEET----TEEEEEEEE--EEECSSEEEEEE
T ss_pred CCeecHHHHhhccCCCceEEEcCCCCc------eEEEEEeecCCceEEEEcCC----ceeEEEEec--cccccCcEEEEE
Confidence 999999999876532 2 278875321 124565532 2334776543 246888875 333 46667778
Q ss_pred CccccCCC
Q 042255 170 SQPIVAPG 177 (280)
Q Consensus 170 d~vLlP~~ 177 (280)
|+||+|+.
T Consensus 151 D~VL~pp~ 158 (324)
T 1o70_A 151 DHVLGVPY 158 (324)
T ss_dssp SSCTTSCC
T ss_pred chhhhhch
Confidence 99999864
No 5
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.62 E-value=2.2e-16 Score=146.26 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=103.5
Q ss_pred cCHHHHHhcCCCcHHHHHHHHhcchHHHHh-cCCCeEEEeeCCccccCCC---------CCC---HHHHHHHHhhccccc
Q 042255 29 FDIIKILSNHPNLLAFSDLLSQTKLNEAIN-KRKTITVLAVDNSSIGGLN---------DRP---VDEIKNILSVHVILD 95 (280)
Q Consensus 29 ~NIt~iL~~~p~fStF~~LL~~T~L~~~Ln-~~~~iTVfAPtN~Af~aL~---------~l~---~~~l~~lL~yHVl~~ 95 (280)
.+|.++|++.++|++|.++|+.+|+.++|+ ..+++|||||+|+||.++. .+. .++++++|+|||+++
T Consensus 159 ~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~ 238 (324)
T 1o70_A 159 TTVLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAIS 238 (324)
T ss_dssp SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEE
T ss_pred hhHHHHhhcCchHHHHHHHHHhhCHHHHhCCCCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEeCC
Confidence 479999999999999999999999999998 4789999999999999872 122 259999999999998
Q ss_pred --ccChhhhccCCCC--Cc-eeeecccCCCCCCCCceEEEEe-CCCCeEEEeCCCCCCCCceEEeeeeeecccceEEEEe
Q 042255 96 --YYDMNKLKKLPKT--SS-WTTMFQSTGNANDKQGYINCTR-LPGEQFVFGSSVKNSPPVAKFVKSVFSQPFNISVLQV 169 (280)
Q Consensus 96 --y~~~~~L~~l~~~--~~-ltTL~qatG~A~~~~G~vnvT~-~~G~~V~~~S~~~gs~~~atvvksv~~~P~~lsV~qV 169 (280)
+|+..+|.+..+. .. ++||. +.+.|+. ..|+.+.+..+. ..++|++.-.. -.|..||.|
T Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~Tl~----------~~l~v~~~~~~~~v~v~~~~----~~a~v~~~di~-~~NGvIHvI 303 (324)
T 1o70_A 239 DKEYTMKDLVKFSQESGSVILPTFR----------DSLSIRVEEEAGRYVIIWNY----KKINVYRPDVE-CTNGIIHVI 303 (324)
T ss_dssp SSCCCHHHHHHHHHHSSSEEEECSS----------SEEEEEEEEETTEEEEEETT----EEEEEEEEEEE-ETTEEEEEE
T ss_pred cceEcHHHHhhhccCCCeeeeeccC----------CcEEEEEEecCCEEEEEecC----ceeEEEEcccc-cCCCeEEEe
Confidence 9998988764321 12 66641 3566665 245558887532 24667664222 257889999
Q ss_pred CccccCCCCC
Q 042255 170 SQPIVAPGLG 179 (280)
Q Consensus 170 d~vLlP~~lf 179 (280)
|+||+|++..
T Consensus 304 D~VL~P~~~~ 313 (324)
T 1o70_A 304 DYPLLEEKDV 313 (324)
T ss_dssp SSCSCCTTTT
T ss_pred ceeecCCccc
Confidence 9999999875
No 6
>1hcw_A BBA1; growth response protein, de novo protein design, supersecondary motif; HET: PYA; NMR {} SCOP: k.14.1.1 PDB: 1t8j_A*
Probab=9.93 E-value=1.3e+02 Score=17.67 Aligned_cols=12 Identities=33% Similarity=0.695 Sum_probs=10.3
Q ss_pred HHHHHHHHhhcc
Q 042255 81 VDEIKNILSVHV 92 (280)
Q Consensus 81 ~~~l~~lL~yHV 92 (280)
.+++.++|+.|.
T Consensus 12 sdelakllrlha 23 (26)
T 1hcw_A 12 SDELAKLLRLHA 23 (26)
T ss_dssp SHHHHHHHHHCC
T ss_pred cHHHHHHHHHhc
Confidence 478999999996
No 7
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=6.41 E-value=3.5e+02 Score=19.93 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=19.2
Q ss_pred HHHHHhcC--CCcHHHHHHHHhcc---hHHHHh
Q 042255 31 IIKILSNH--PNLLAFSDLLSQTK---LNEAIN 58 (280)
Q Consensus 31 It~iL~~~--p~fStF~~LL~~T~---L~~~Ln 58 (280)
+..+|.+. .-|..|...|.+|+ |++.|+
T Consensus 59 Lld~L~~rG~~Af~~F~~aL~et~~~~La~lL~ 91 (97)
T 3ygs_P 59 LIIDLETRGSQALPLFISCLEDTGQDMLASFLR 91 (97)
T ss_dssp HHHHHTTSCTTHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHcChHHHHHHHHHHHHcCcHHHHHHHc
Confidence 55666443 33999999999874 666664
No 8
>1l4z_B Streptokinase; plasminogen, protein complex, hydrolase/blood clotting complex; 2.80A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1
Probab=5.84 E-value=3.8e+02 Score=21.69 Aligned_cols=69 Identities=16% Similarity=0.309 Sum_probs=28.5
Q ss_pred hcCCCeEEEeeCCccccCCCCCCHHHHHHHHhhccc------ccccChhhhccCCCCCceeeecccCCCCCCCCceEEEE
Q 042255 58 NKRKTITVLAVDNSSIGGLNDRPVDEIKNILSVHVI------LDYYDMNKLKKLPKTSSWTTMFQSTGNANDKQGYINCT 131 (280)
Q Consensus 58 n~~~~iTVfAPtN~Af~aL~~l~~~~l~~lL~yHVl------~~y~~~~~L~~l~~~~~ltTL~qatG~A~~~~G~vnvT 131 (280)
+++..-.-||-+|.||... +...+|-+-+++..+ -+||-.-+|.. .. || + ..+|.|.+.
T Consensus 44 ts~~~skpfatd~gam~~k--l~KadLLkAIq~ql~~~~hs~d~~~evvDFa~----DA--~l---t----dr~gkvyfA 108 (136)
T 1l4z_B 44 TSRPASKPFATDSGAMPHK--LEKADLLKAIQEQLIANVHSNDDYFEVIDFAS----DA--TI---T----DRNGKVYFA 108 (136)
T ss_dssp CCC-----------CBCSE--EEHHHHHHHHHHHHHSSCCTTCCCEEEEEECT----TC--EE---E----CTTCCEECC
T ss_pred ccccccccccccccccccc--ccHHHHHHHHHHHHHhhhcccccceEEEeccc----cc--ee---e----ccCCcEEEe
Confidence 3443445688888888642 355555555555444 44444444332 11 11 1 235667766
Q ss_pred eCCCCeEEEeC
Q 042255 132 RLPGEQFVFGS 142 (280)
Q Consensus 132 ~~~G~~V~~~S 142 (280)
..+|. |++..
T Consensus 109 ~~dGS-VtLp~ 118 (136)
T 1l4z_B 109 DKDGS-VTLPT 118 (136)
T ss_dssp CTTSE-EECCS
T ss_pred cCCCc-eecCc
Confidence 66665 77754
No 9
>1l4d_B Streptokinase; plasminogen, protein complex, hydrolase/hydrolase activator complex; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1
Probab=5.30 E-value=4.2e+02 Score=21.08 Aligned_cols=69 Identities=14% Similarity=0.290 Sum_probs=29.5
Q ss_pred HhcCCCeEEEeeCCccccCCCCCCHHHHHHHHhhccc------ccccChhhhccCCCCCc-eeeecccCCCCCCCCceEE
Q 042255 57 INKRKTITVLAVDNSSIGGLNDRPVDEIKNILSVHVI------LDYYDMNKLKKLPKTSS-WTTMFQSTGNANDKQGYIN 129 (280)
Q Consensus 57 Ln~~~~iTVfAPtN~Af~aL~~l~~~~l~~lL~yHVl------~~y~~~~~L~~l~~~~~-ltTL~qatG~A~~~~G~vn 129 (280)
|+++..-.-||-++.||... +...+|-+-+++..+ -+||-.-+|.. .. ++ +.+|.|.
T Consensus 29 lts~~~~~~~~~~~~~~~~k--l~KadLLkAIq~q~~~~~hs~d~~~evvDFa~----DA~lt----------~r~gkvy 92 (122)
T 1l4d_B 29 LTSRPASKPFATDSGAMPHK--LEKADLLKAIQEQLIANVHSNDDYFEVIDFAS----DATIT----------DRNGKVY 92 (122)
T ss_dssp EESCCC----------EESE--EEHHHHHHHHHHHHHHSCCSSSCCEEEEEECT----TCEEE----------ETTCCEE
T ss_pred eecccccccccccccccccc--ccHHHHHHHHHHHHhhhhccccceeEEEeccc----cceee----------ccCCcEE
Confidence 34444455678888888652 345555555554444 44444444432 11 22 2356677
Q ss_pred EEeCCCCeEEEeC
Q 042255 130 CTRLPGEQFVFGS 142 (280)
Q Consensus 130 vT~~~G~~V~~~S 142 (280)
+.+.+|. |.+..
T Consensus 93 ~A~~dGS-Vtlpk 104 (122)
T 1l4d_B 93 FADKDGS-VTLPT 104 (122)
T ss_dssp CCCTTSE-EECCS
T ss_pred EecCCCc-eecCc
Confidence 7666665 77754
No 10
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=5.01 E-value=1.6e+02 Score=27.49 Aligned_cols=26 Identities=4% Similarity=0.133 Sum_probs=9.9
Q ss_pred CccCHHHHHh-cCCCcHHHHHHHHhcc
Q 042255 27 NGFDIIKILS-NHPNLLAFSDLLSQTK 52 (280)
Q Consensus 27 ~a~NIt~iL~-~~p~fStF~~LL~~T~ 52 (280)
+..+|+---. ..++|++....|....
T Consensus 29 ~~~~~~V~~~~g~g~f~TIq~Ai~aa~ 55 (364)
T 3uw0_A 29 AQYNAVVSTTPQGDEFSSINAALKSAP 55 (364)
T ss_dssp ---------------CCCHHHHHHHSC
T ss_pred cCceEEEcCCCCCCCcccHHHHHhhcc
Confidence 3345544334 5589999999988653
Done!