BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042256
RRRKSCCRVCCCCFCFFIVLLIILIVIAGALFYLWFDPKLPVFHLQSFSFRHFNVSVKSD
GTYLHAATLTRVEARNPNGKLRYYYRHTDVEVTAGKDKEIDLGTGSVPGFTQGTKNARSL
KIETKTDELVEDGMGPRLMSHHKSKDLVVNVVVKTTVAVIVQGRKTRPLAVKVTCGGQSL
KALDKMPKCTIHFLKW

High Scoring Gene Products

Symbol, full name Information P value
AT2G46300 protein from Arabidopsis thaliana 3.0e-30
AT1G01453 protein from Arabidopsis thaliana 5.3e-24
AT4G01110 protein from Arabidopsis thaliana 6.8e-24
AT1G17620 protein from Arabidopsis thaliana 5.2e-09
AT1G65690 protein from Arabidopsis thaliana 7.8e-05
AT2G27080 protein from Arabidopsis thaliana 0.00012
AT1G54540 protein from Arabidopsis thaliana 0.00020
EMB3135
AT5G11890
protein from Arabidopsis thaliana 0.00040

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042256
        (196 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2062974 - symbol:AT2G46300 "AT2G46300" species...   334  3.0e-30   1
TAIR|locus:4515102487 - symbol:AT1G01453 "AT1G01453" spec...   275  5.3e-24   1
TAIR|locus:2125093 - symbol:AT4G01110 "AT4G01110" species...   274  6.8e-24   1
TAIR|locus:2007968 - symbol:AT1G17620 "AT1G17620" species...   137  5.2e-09   1
TAIR|locus:2018531 - symbol:AT1G65690 "AT1G65690" species...   109  7.8e-05   1
TAIR|locus:2059274 - symbol:AT2G27080 "AT2G27080" species...   108  0.00012   1
TAIR|locus:2020163 - symbol:AT1G54540 "AT1G54540" species...   106  0.00020   1
TAIR|locus:2143064 - symbol:EMB3135 "AT5G11890" species:3...   105  0.00040   1


>TAIR|locus:2062974 [details] [associations]
            symbol:AT2G46300 "AT2G46300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR004864 EMBL:CP002685
            Pfam:PF03168 EMBL:DQ446625 IPI:IPI00537558 RefSeq:NP_182153.2
            UniGene:At.36527 ProteinModelPortal:Q1PEU2 PRIDE:Q1PEU2
            EnsemblPlants:AT2G46300.1 GeneID:819238 KEGG:ath:AT2G46300
            TAIR:At2g46300 InParanoid:Q1PEU2 OMA:YLWFDPK PhylomeDB:Q1PEU2
            ProtClustDB:CLSN2680282 Genevestigator:Q1PEU2 Uniprot:Q1PEU2
        Length = 252

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 73/170 (42%), Positives = 98/170 (57%)

Query:    30 ALFYLWFDPKLPVFHLQSFSFRHFNVSVKSDGTYLHAATLTRVEARNPNGKLRYYYRHTD 89
             A+FYLWFDPKLP F L SF    F ++   DG  L A  + RVE +NPN KL +YY +T 
Sbjct:    79 AVFYLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVARVEMKNPNSKLVFYYGNTA 138

Query:    90 VEVTAGK-DKEIDLGTGSVPGFTQGTKNARSLKIETKT-DELVEDGMGPRLMSHHKSKDL 147
             V+++ G  + E  +G  ++ GF QG KN+ S+K+ET   ++LVE G+  RL +  +SKDL
Sbjct:   139 VDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQLVERGLAKRLAAKFQSKDL 198

Query:   148 XXXXXXXXXXXXXXQGRKTRPLAVKVTCGGQSLKALDK-MPKCTIHFLKW 196
                            G K   LAV + CGG SL  LD   PKC ++ LKW
Sbjct:   199 VINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSLNKLDTDSPKCILNTLKW 248


>TAIR|locus:4515102487 [details] [associations]
            symbol:AT1G01453 "AT1G01453" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 IPI:IPI00517183 RefSeq:NP_001117208.1
            UniGene:At.68989 ProteinModelPortal:F4HSB6 PRIDE:F4HSB6
            EnsemblPlants:AT1G01453.2 GeneID:6240388 KEGG:ath:AT1G01453
            OMA:FAHAPRS Uniprot:F4HSB6
        Length = 289

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 70/175 (40%), Positives = 92/175 (52%)

Query:    28 AGALFYLWFDPKLPVFHLQSFSFRHFNVSV-KSDG--TYLHAATLTRVEARNPNGKLRYY 84
             A A+F+LW+ PKLPV  L SF   +FN S  KSD   ++L A T + ++ RNPNGKL +Y
Sbjct:    88 AVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTTSVLDFRNPNGKLTFY 147

Query:    85 YRHTDVEVTAG-KDKEIDLGTGSVPGFTQGTKNARSLKIETKTDEL-VEDGMGPRLMSHH 142
             Y  TDV V  G KD E +L +  V GF +   N  ++ + T   +  V+D    RL    
Sbjct:   148 YGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRKRQVDDPTAKRLQVEL 207

Query:   143 KSKDLXXXXXXXXXXXXXXQGRKTRPLAVKVTCGGQSLKALD-KMPKCTIHFLKW 196
             KSK L                RK   + V + CGG  L+ LD KM +CTI  LKW
Sbjct:   208 KSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKMAQCTIKMLKW 262


>TAIR|locus:2125093 [details] [associations]
            symbol:AT4G01110 "AT4G01110" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002687 ProtClustDB:CLSN2680282 EMBL:AY735632
            IPI:IPI00535259 RefSeq:NP_192020.2 UniGene:At.19620
            UniGene:At.68764 UniGene:At.71291 ProteinModelPortal:Q5XV90
            EnsemblPlants:AT4G01110.1 GeneID:827897 KEGG:ath:AT4G01110
            TAIR:At4g01110 eggNOG:NOG328533 InParanoid:Q5XV90 OMA:CITVAIV
            PhylomeDB:Q5XV90 Genevestigator:Q5XV90 Uniprot:Q5XV90
        Length = 261

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 68/174 (39%), Positives = 93/174 (53%)

Query:    30 ALFYLWFDPKLPVFHLQSFSFRHFNVS--VKSDG-TYLHAATLTRVEARNPNGKLRYYYR 86
             ++F+L++ P+LPV  L SF   +FN S     DG + L A    R++ RNPNGKLRYYY 
Sbjct:    84 SVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLTAEATARLDFRNPNGKLRYYYG 143

Query:    87 HTDVEVTAGKDK-EIDLGTGSVPGFTQ--GTKNARSLKIETKTDELVEDGMGPRLMSHHK 143
             + DV V+ G+D  E  LG+  V GF +  G +    + I+ K  + V+D    RL +  K
Sbjct:   144 NVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIVPIKVKKQQ-VDDPTVKRLRADMK 202

Query:   144 SKDLXXXXXXXXXXXXXXQGRKTRPLAVKVTCGGQSLKALD-KMPKCTIHFLKW 196
             SK L                RK   + V ++CGG  L+ LD KM KCTI  LKW
Sbjct:   203 SKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVRLQTLDSKMSKCTIKMLKW 256


>TAIR|locus:2007968 [details] [associations]
            symbol:AT1G17620 "AT1G17620" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] [GO:0009506 "plasmodesma"
            evidence=IDA] InterPro:IPR004864 EMBL:CP002684 GO:GO:0005886
            GO:GO:0009506 EMBL:AC022492 Pfam:PF03168 EMBL:AY052685
            EMBL:AF446896 EMBL:AK227288 IPI:IPI00528113 RefSeq:NP_564029.1
            UniGene:At.22670 ProteinModelPortal:Q9LNP3 STRING:Q9LNP3
            PRIDE:Q9LNP3 EnsemblPlants:AT1G17620.1 GeneID:838339
            KEGG:ath:AT1G17620 TAIR:At1g17620 InParanoid:Q9LNP3 OMA:TAAHSCK
            PhylomeDB:Q9LNP3 ProtClustDB:CLSN2917017 Genevestigator:Q9LNP3
            Uniprot:Q9LNP3
        Length = 264

 Score = 137 (53.3 bits), Expect = 5.2e-09, P = 5.2e-09
 Identities = 44/156 (28%), Positives = 67/156 (42%)

Query:    28 AGALFYLWFDPKLPVFHLQSFSFRHFNVSVKSDGTYLHAATLTRVEARNPNGKLRYYYRH 87
             A A+ YL + P+ P F +        N +       L  A    V ARNPN  + + Y  
Sbjct:    79 ASAVVYLIYRPQRPSFTVSELKISTLNFT---SAVRLTTAISLSVIARNPNKNVGFIYDV 135

Query:    88 TDV---EVTAGKDKEIDLGTGSVPGFTQGTKNARSLK--IETKTDELVEDGMGPRLMSHH 142
             TD+   + + G D ++ +G G++  F+ G KN  +L+  I +  DEL E   G +L    
Sbjct:   136 TDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDELDEISAG-KLKGDL 194

Query:   143 KSKDLXXXXXXXXXXXXXXQGR-KTRPLAVKVTCGG 177
             K+K                 G  KT    ++VTC G
Sbjct:   195 KAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCEG 230


>TAIR|locus:2018531 [details] [associations]
            symbol:AT1G65690 "AT1G65690" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006865 "amino acid transport" evidence=RCA]
            [GO:0009627 "systemic acquired resistance" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] InterPro:IPR004864 EMBL:CP002684 Pfam:PF03168
            EMBL:AY086125 IPI:IPI00518796 RefSeq:NP_564862.1 UniGene:At.35855
            ProteinModelPortal:Q8LD98 EnsemblPlants:AT1G65690.1 GeneID:842880
            KEGG:ath:AT1G65690 TAIR:At1g65690 eggNOG:NOG301283
            InParanoid:Q8LD98 OMA:SSCKFRL PhylomeDB:Q8LD98
            ProtClustDB:CLSN2686710 Genevestigator:Q8LD98 Uniprot:Q8LD98
        Length = 252

 Score = 109 (43.4 bits), Expect = 7.8e-05, P = 7.8e-05
 Identities = 30/93 (32%), Positives = 44/93 (47%)

Query:    31 LFYLWFDPKLPVFHLQSFSFRHFNVSVKSDGTYLHAATLTRVEARNPNGKLRYYYRHTDV 90
             + YL F PKLP + +       F ++  S  T     T+T   A+NPN K+  YY     
Sbjct:    86 ILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTIT---AKNPNEKIGIYYEDGS- 141

Query:    91 EVTAGKDKEIDLGTGSVPGFTQGTKNARSLKIE 123
             ++T     E  L  GS+P F QG +N   + +E
Sbjct:   142 KITVWY-MEHQLSNGSLPKFYQGHENTTVIYVE 173


>TAIR|locus:2059274 [details] [associations]
            symbol:AT2G27080 "AT2G27080" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA]
            InterPro:IPR004864 GO:GO:0009506 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC005623 Pfam:PF03168
            HOGENOM:HOG000238384 UniGene:At.68415 EMBL:AF370591 EMBL:AY052291
            EMBL:AY061921 EMBL:AK227800 IPI:IPI00543432 PIR:E84668
            RefSeq:NP_565634.1 RefSeq:NP_973540.1 ProteinModelPortal:Q9ZVD2
            IntAct:Q9ZVD2 EnsemblPlants:AT2G27080.1 EnsemblPlants:AT2G27080.2
            GeneID:817250 KEGG:ath:AT2G27080 TAIR:At2g27080 eggNOG:NOG235771
            InParanoid:Q9ZVD2 OMA:GSVKTWT PhylomeDB:Q9ZVD2
            ProtClustDB:CLSN2688462 ArrayExpress:Q9ZVD2 Genevestigator:Q9ZVD2
            Uniprot:Q9ZVD2
        Length = 260

 Score = 108 (43.1 bits), Expect = 0.00012, P = 0.00012
 Identities = 35/148 (23%), Positives = 63/148 (42%)

Query:    30 ALFYLWFDPKLPVFHLQSFSFRHFNVSVKSDGTYLHAATLTRVEARNPNGKLRYYY-RHT 88
             A+ YL + P+ P + ++ FS    N++  S    +  +    V +RN NGK+  YY + +
Sbjct:    94 AVLYLIYRPEAPKYSIEGFSVSGINLNSTSP---ISPSFNVTVRSRNGNGKIGVYYEKES 150

Query:    89 DVEVTAGKDKEIDLGTGSVPGFTQGTKNARSLKIETKTDEL-VEDGMGPRLMSHHKSKDL 147
              V+V      ++D+  G +P F Q  KN   +K+     ++ +  GM   + +    K +
Sbjct:   151 SVDVYYN---DVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTV 207

Query:   148 XXXXXXXXXXXXXXQGRKTRPLAVKVTC 175
                              KT  + V V C
Sbjct:   208 PFKLKIKAPVKIKFGSVKTWTMIVNVDC 235


>TAIR|locus:2020163 [details] [associations]
            symbol:AT1G54540 "AT1G54540" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC005287 Pfam:PF03168
            HOGENOM:HOG000238384 EMBL:AY600530 EMBL:AY649288 IPI:IPI00537856
            PIR:D96587 RefSeq:NP_175856.1 UniGene:At.50731
            ProteinModelPortal:Q9SLI0 PaxDb:Q9SLI0 PRIDE:Q9SLI0
            EnsemblPlants:AT1G54540.1 GeneID:841896 KEGG:ath:AT1G54540
            TAIR:At1g54540 eggNOG:NOG326861 InParanoid:Q9SLI0 OMA:YYEKGGH
            PhylomeDB:Q9SLI0 ProtClustDB:CLSN2914189 ArrayExpress:Q9SLI0
            Genevestigator:Q9SLI0 Uniprot:Q9SLI0
        Length = 239

 Score = 106 (42.4 bits), Expect = 0.00020, P = 0.00020
 Identities = 32/95 (33%), Positives = 44/95 (46%)

Query:    28 AGALFYLWFDPKLPVFHLQSFSFRHFNVSVKSDGTYLHAATLTRVEARNPNGKLRYYYRH 87
             A A+ Y  F PKLP + + S   R  N+ +  D + L A     + ARNPN K+  YY  
Sbjct:    71 AVAVVYFVFHPKLPSYEVNSL--RVTNLGINLDLS-LSAEFKVEITARNPNEKIGIYYEK 127

Query:    88 TDVEVTAGKDKEIDLGTGSVPGFTQGTKNARSLKI 122
                 +    DK   L  G +P F QG +N   L +
Sbjct:   128 GG-HIGVWYDKT-KLCEGPIPRFYQGHRNVTKLNV 160


>TAIR|locus:2143064 [details] [associations]
            symbol:EMB3135 "AT5G11890" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 EMBL:CP002688 EMBL:AL163812 IPI:IPI00527138
            PIR:T48548 RefSeq:NP_196750.1 UniGene:At.28027
            ProteinModelPortal:Q9LYI4 PRIDE:Q9LYI4 EnsemblPlants:AT5G11890.1
            GeneID:831062 KEGG:ath:AT5G11890 TAIR:At5g11890 InParanoid:Q9LYI4
            OMA:CRRICCC PhylomeDB:Q9LYI4 ProtClustDB:CLSN2916471
            Genevestigator:Q9LYI4 Uniprot:Q9LYI4
        Length = 287

 Score = 105 (42.0 bits), Expect = 0.00040, P = 0.00040
 Identities = 39/157 (24%), Positives = 60/157 (38%)

Query:    28 AGALFYLWFDPKLPVFHLQSFSFRHFNVSVKSDGTYLHAATLTRVE--ARNPNGKLRYYY 85
             A    Y+ + P+ P F + S      N++  SD +  H ++       + NPN  L + Y
Sbjct:   100 AATAMYVIYHPRPPSFSVPSIRISRVNLTTSSDSSVSHLSSFFNFTLISENPNQHLSFSY 159

Query:    86 RHTDVEVTAGKDKEIDLGTGSVPGFTQGTKNARSLKIETKTDELVEDGMGPRLMSHHKSK 145
                 V V + K   + LG G+VP F     N  S      T     + + P    H +S 
Sbjct:   160 DPFTVTVNSAKSGTM-LGNGTVPAFFSDNGNKTSFHGVIATSTAARE-LDPDEAKHLRS- 216

Query:   146 DLXXXXXXXXXXXXXX----QGR-KTRPLAVKVTCGG 177
             DL                   G+ K+  + +KVTC G
Sbjct:   217 DLTRARVGYEIEMRTKVKMIMGKLKSEGVEIKVTCEG 253


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      196       160   0.00097  106 3  11 22  0.36    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  147 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.49u 0.10s 13.59t   Elapsed:  00:00:01
  Total cpu time:  13.49u 0.10s 13.59t   Elapsed:  00:00:01
  Start:  Mon May 20 23:02:25 2013   End:  Mon May 20 23:02:26 2013

Back to top