Query 042259
Match_columns 745
No_of_seqs 445 out of 3196
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 07:19:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 3E-119 9E-124 1038.6 49.0 612 120-745 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2E-108 5E-113 952.7 51.9 600 120-744 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 2.6E-80 8.8E-85 744.8 44.7 530 133-743 7-604 (926)
4 3afg_A Subtilisin-like serine 100.0 1E-61 3.4E-66 550.7 38.4 365 31-602 34-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.5E-58 5.1E-63 508.5 18.9 336 32-601 2-391 (395)
6 2p4e_P Proprotein convertase s 100.0 9.1E-59 3.1E-63 528.1 4.3 335 32-570 75-423 (692)
7 3t41_A Epidermin leader peptid 100.0 6.5E-56 2.2E-60 500.1 26.5 333 75-603 65-466 (471)
8 1y9z_A Alkaline serine proteas 100.0 2.1E-55 7.3E-60 490.3 21.6 379 127-622 6-436 (441)
9 1r6v_A Subtilisin-like serine 100.0 8.9E-55 3.1E-59 499.0 23.6 371 29-613 28-450 (671)
10 1r0r_E Subtilisin carlsberg; h 100.0 1.5E-52 5E-57 437.9 19.3 262 127-601 6-274 (274)
11 1dbi_A AK.1 serine protease; h 100.0 4.4E-52 1.5E-56 435.4 22.8 265 126-601 12-279 (280)
12 1gci_A Subtilisin; hydrolase, 100.0 8.2E-52 2.8E-56 430.6 23.7 261 127-601 6-269 (269)
13 1to2_E Subtilisin BPN'; serine 100.0 2E-51 6.8E-56 430.7 22.8 263 127-602 6-276 (281)
14 4h6x_A Thiazoline oxidase/subt 100.0 5.3E-53 1.8E-57 457.8 9.7 292 134-601 22-337 (357)
15 1thm_A Thermitase; hydrolase(s 100.0 9.6E-51 3.3E-55 425.3 24.2 258 132-601 20-278 (279)
16 2ixt_A 36KDA protease; serine 100.0 3E-50 1E-54 429.1 26.4 284 126-597 7-310 (310)
17 2x8j_A Intracellular subtilisi 100.0 1.7E-51 5.9E-56 440.3 16.0 266 126-601 22-310 (327)
18 3zxy_A Subtilisin-like protein 100.0 5.4E-51 1.8E-55 428.7 15.4 263 139-601 3-274 (282)
19 2z30_A TK-subtilisin; thermoco 100.0 2.4E-50 8.2E-55 431.0 16.3 265 126-601 9-316 (320)
20 2iy9_A SUBA; toxin, shiga, pla 100.0 2E-50 6.9E-55 437.1 14.9 266 132-602 32-329 (347)
21 4h6w_A N-terminal cyanobactin 100.0 3.3E-50 1.1E-54 428.2 15.0 269 134-601 12-287 (306)
22 1sh7_A Extracellular subtilisi 100.0 1.9E-48 6.7E-53 408.1 22.9 235 133-570 19-257 (284)
23 1wmd_A Protease; alpha-beta hy 100.0 6.5E-49 2.2E-53 437.7 20.4 287 134-603 12-319 (434)
24 3lxu_X Tripeptidyl-peptidase 2 100.0 7.8E-48 2.7E-52 458.6 25.1 405 144-745 214-653 (1354)
25 3lpc_A APRB2; protease, subtil 100.0 1.6E-48 5.4E-53 421.4 16.7 289 132-602 21-337 (340)
26 2b6n_A Proteinase K; S binding 100.0 2.5E-47 8.7E-52 399.1 23.3 236 133-569 21-260 (278)
27 2pwa_A Proteinase K; structure 100.0 8.4E-48 2.9E-52 402.2 17.5 239 135-596 24-271 (279)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 1.8E-47 6.2E-52 400.4 19.9 237 133-571 21-260 (276)
29 2oxa_A Extracellular serine pr 100.0 3.6E-46 1.2E-50 431.3 25.9 291 133-607 60-430 (600)
30 1p8j_A Furin precursor; prohor 100.0 9.5E-47 3.2E-51 423.8 17.5 287 132-605 27-333 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 5.3E-46 1.8E-50 420.4 19.1 281 132-604 43-344 (503)
32 2qtw_B Proprotein convertase s 100.0 2.1E-45 7E-50 408.1 20.8 267 135-601 18-313 (546)
33 3f7m_A Alkaline serine proteas 100.0 1.8E-45 6.1E-50 385.9 17.9 229 135-570 25-261 (279)
34 3hjr_A Extracellular serine pr 100.0 1.4E-43 4.7E-48 411.3 26.6 311 132-604 59-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 4.5E-25 1.5E-29 249.8 9.9 96 233-333 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 9.5E-22 3.3E-26 212.1 11.3 99 234-333 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 2.8E-10 9.4E-15 127.9 6.9 97 235-333 263-374 (544)
38 2w2n_P Proprotein convertase s 99.0 2.7E-10 9.3E-15 101.0 4.9 80 29-118 34-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.9 2.1E-09 7E-14 89.2 7.2 75 29-122 5-79 (80)
40 2qtw_A Proprotein convertase s 98.8 3.2E-09 1.1E-13 95.2 5.0 80 29-118 44-123 (124)
41 3icu_A E3 ubiquitin-protein li 98.6 1.5E-07 5.1E-12 90.5 11.3 94 376-470 82-187 (194)
42 1v5i_B POIA1, IA-1=serine prot 98.6 4.1E-08 1.4E-12 80.2 6.0 70 33-118 3-75 (76)
43 2z30_B TK-subtilisin; thermoco 97.6 8.1E-05 2.8E-09 58.4 5.5 44 73-117 20-63 (65)
44 2ys4_A Hydrocephalus-inducing 96.3 0.016 5.3E-07 51.5 9.2 74 659-740 40-114 (122)
45 2ek8_A Aminopeptidase; metallo 96.2 0.024 8.1E-07 61.9 11.6 72 385-457 108-182 (421)
46 3iib_A Peptidase M28; YP_92679 95.5 0.056 1.9E-06 59.4 11.0 102 362-470 105-227 (444)
47 3kas_A Transferrin receptor pr 95.2 0.031 1.1E-06 63.9 8.0 69 388-457 128-230 (640)
48 3fed_A Glutamate carboxypeptid 94.5 0.044 1.5E-06 63.4 7.0 71 387-458 150-268 (707)
49 3qbt_B Inositol polyphosphate 89.7 2 6.8E-05 38.7 10.1 83 661-744 44-137 (140)
50 2e6j_A Hydin protein; PAPD, st 88.9 0.87 3E-05 39.1 6.9 68 659-730 25-93 (112)
51 3lxu_X Tripeptidyl-peptidase 2 87.4 0.26 8.9E-06 60.2 3.2 25 138-162 31-55 (1354)
52 2r39_A FIXG-related protein; s 86.8 2.6 8.8E-05 36.7 8.6 55 661-717 32-86 (118)
53 1y9z_A Alkaline serine proteas 86.5 0.43 1.5E-05 52.2 4.1 31 476-514 181-211 (441)
54 2qsv_A Uncharacterized protein 76.8 11 0.00037 36.6 9.7 66 661-730 20-85 (220)
55 3qis_A Inositol polyphosphate 76.5 11 0.00039 39.6 10.5 83 661-744 47-140 (366)
56 3zyz_A Beta-D-glucoside glucoh 69.1 15 0.00051 42.4 9.8 56 661-717 614-676 (713)
57 3idu_A Uncharacterized protein 68.0 24 0.00082 31.0 8.8 53 659-715 32-85 (127)
58 1row_A SSP-19, MSP-domain prot 61.0 32 0.0011 29.3 8.0 50 663-715 18-67 (109)
59 1m1s_A WR4; structural genomic 59.9 36 0.0012 29.3 8.2 51 662-715 25-75 (116)
60 3isy_A Bsupi, intracellular pr 56.4 46 0.0016 28.8 8.3 69 659-728 17-102 (120)
61 1z9l_A Vesicle-associated memb 56.1 26 0.00088 30.7 6.9 52 661-715 28-79 (128)
62 1msp_A MSP, major sperm protei 55.4 33 0.0011 29.9 7.4 52 661-715 26-77 (126)
63 2x41_A Beta-glucosidase; hydro 53.3 13 0.00045 43.0 5.6 57 660-717 615-679 (721)
64 1w8o_A Bacterial sialidase; 3D 52.6 72 0.0025 35.6 11.7 79 649-731 363-442 (601)
65 1wic_A Hypothetical protein ri 50.8 33 0.0011 31.1 6.8 53 661-716 36-88 (152)
66 3abz_A Beta-glucosidase I; gly 48.8 46 0.0016 39.1 9.3 44 525-568 618-662 (845)
67 2cri_A Vesicle-associated memb 46.8 34 0.0012 30.8 6.2 52 661-715 32-83 (147)
68 4ep8_B Urease subunit beta; al 45.6 68 0.0023 26.5 7.0 16 660-675 18-33 (101)
69 2kq1_A BH0266 protein; solutio 44.9 7.3 0.00025 33.8 1.4 56 661-716 54-111 (119)
70 2qsv_A Uncharacterized protein 42.7 58 0.002 31.3 7.7 68 660-730 134-203 (220)
71 1wgl_A TOLL-interacting protei 42.0 16 0.00056 27.3 2.7 37 533-569 3-39 (59)
72 4ubp_B Protein (urease (chain 40.7 74 0.0025 27.4 6.8 17 659-675 23-39 (126)
73 4ac7_B Urease subunit beta; hy 40.7 74 0.0025 27.4 6.8 17 659-675 23-39 (126)
74 3sd2_A Putative member of DUF3 33.2 2.1E+02 0.0071 23.8 8.2 66 652-729 35-100 (101)
75 3q48_A Chaperone CUPB2; IG fol 28.6 3E+02 0.01 27.0 10.3 59 658-719 40-108 (257)
76 1ni7_A ER75, hypothetical prot 24.4 53 0.0018 29.8 3.5 33 528-561 78-110 (155)
77 3d33_A Domain of unknown funct 22.1 3.5E+02 0.012 22.7 9.4 69 652-729 39-107 (108)
78 4ay0_A Chaperone protein CAF1M 20.9 4.6E+02 0.016 24.9 9.7 58 660-720 26-90 (218)
79 3g0m_A Cysteine desulfuration 20.6 51 0.0018 29.4 2.6 33 527-560 70-102 (141)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=2.7e-119 Score=1038.56 Aligned_cols=612 Identities=41% Similarity=0.669 Sum_probs=559.1
Q ss_pred CCCCCCccCccCCCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCC----cccCcceeeeeeCC
Q 042259 120 TTHSPNFLGLHQNSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEG----ANCNNKIIGARNFL 195 (745)
Q Consensus 120 ~~~s~~~~g~~~~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~----~~~n~ki~~~~~~~ 195 (745)
++++|+|+|+.+..++|..+.+|+||+|||||||||++||+|.+.++++++.+|++.|+.+. ..||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 46889999998778899999999999999999999999999999999999999999999876 56999999999997
Q ss_pred CC-----------CCCCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHH
Q 042259 196 NK-----------SEPPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAID 264 (745)
Q Consensus 196 ~~-----------~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~ 264 (745)
++ ..+++|..||||||||||||+.+++.+.+|++.|.+.||||+|+|++||+++ ..++..+++++||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~-~~g~~~~~i~~Ai~ 159 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSF-NEGTFTSDLIAAMD 159 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEE-TTEECHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccC-CCCCCHHHHHHHHH
Confidence 32 2467889999999999999999888888888889899999999999999999 77799999999999
Q ss_pred HHHhCCCcEEEEccCCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeC
Q 042259 265 AAVEEGVDVLSISLGSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLG 344 (745)
Q Consensus 265 ~a~~~g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~ 344 (745)
||+++|+||||||||+...++..+.+..++++|.++|++||+||||+|+...++++.+||+|+|||++.|+.|...+.++
T Consensus 160 ~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lg 239 (649)
T 3i6s_A 160 QAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLG 239 (649)
T ss_dssp HHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEET
T ss_pred HHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeC
Confidence 99999999999999998777888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcc--cceEEEEeeCCCcchhhhhhhHhhcCceEEEE
Q 042259 345 NQETYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDV--KGKVVLCQRGGGTQRIRKGKDVKDAGGAAMIL 422 (745)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~ 422 (745)
+++++.|.++++.... ...+|++|.. ....|.+..+++..+ +|||++| +|+.|.+.+|..+++++|+.|+|+
T Consensus 240 ng~~~~g~sl~~~~~~-~~~~plv~~~----~~~~C~~~~l~~~~vdl~GkIvlc-~~g~~~~~~k~~~~~~~Ga~g~i~ 313 (649)
T 3i6s_A 240 NGLKIRGWSLFPARAF-VRDSPVIYNK----TLSDCSSEELLSQVENPENTIVIC-DDNGDFSDQMRIITRARLKAAIFI 313 (649)
T ss_dssp TSCEEEEECCCSSCBC-EEEEEEECCT----TTTTCCCHHHHTTSSSGGGCEEEE-CCCSCHHHHHHHHHHHTCSEEEEE
T ss_pred CCcEEeeeecccCccc-CcceeeEecc----cccccccccccccccccCCcEEEE-eCCCccHHHHHHHHHhcCceEEEE
Confidence 9999999999887643 6679999977 357899888888877 9999999 999999999999999999999999
Q ss_pred ecCCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceE
Q 042259 423 MNDELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDII 502 (745)
Q Consensus 423 ~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~ 502 (745)
+|+. .....+.+.+|.++|+..+|..|+.|++++.+++++|.+..+..+..+.+.+++||||||+...++++||||+
T Consensus 314 ~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~ 390 (649)
T 3i6s_A 314 SEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDIL 390 (649)
T ss_dssp CCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEE
T ss_pred ecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEE
Confidence 9986 4455678899999999999999999999999999999999999998999999999999999988899999999
Q ss_pred eCCccEEeccCCCCcc----CCC-cccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCccc
Q 042259 503 GPGVSILAAWPFSEEN----ITN-TKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIM 577 (745)
Q Consensus 503 APG~~I~sa~~~~~~~----~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~ 577 (745)
|||++|+++++..... .+. +...|..+||||||||||||+||||||+||+|+|++||++||+||+++++.+.++.
T Consensus 391 APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~ 470 (649)
T 3i6s_A 391 APGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIK 470 (649)
T ss_dssp EECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCE
T ss_pred eCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCccc
Confidence 9999999999885411 111 34689999999999999999999999999999999999999999999999999987
Q ss_pred CCC-CCCCCCcccCCCCCCccCCCCCCcccccccccceeecccCCCCccceeeeeccccc--ccccCcccccccCCCcee
Q 042259 578 NHH-LLPADLFAVGAGHVNPSKANDPGLVYEISHDDYVRYLCGKNYTDQQIEGIVDHDVQ--CSKVSSIAEAELNYPSFS 654 (745)
Q Consensus 578 ~~~-~~~~~~~~~G~G~vn~~~A~~~~lv~d~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ln~ps~~ 654 (745)
+.. +.+++++.||+|+||+.+|++||||||++.+||++|||++||+.++|+.|++..++ |+. ...+||||||+
T Consensus 471 ~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~~lNyPs~~ 546 (649)
T 3i6s_A 471 DSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSADLNYPSFI 546 (649)
T ss_dssp ETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCCCCCCSSEE
T ss_pred ccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chhhcCCCcEE
Confidence 763 77889999999999999999999999999999999999999999999999998887 975 46799999999
Q ss_pred eec-CCcc-----EEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEEE
Q 042259 655 VKL-GSSP-----QTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYLS 728 (745)
Q Consensus 655 ~~~-~~~~-----~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~ 728 (745)
+.+ ..+. ++|+|||||||+...+|+++++.|.|++|+|+|++|+|.+.+|+++|+|||+......+.|.||+|+
T Consensus 547 ~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~ 626 (649)
T 3i6s_A 547 ALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSIT 626 (649)
T ss_dssp EEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEE
T ss_pred eecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEE
Confidence 987 4545 8999999999998999999999999999999999999998899999999999876545578999999
Q ss_pred EEc--CceEEEeeEEEEeC
Q 042259 729 WVS--ATHTVRSPIAIGFE 745 (745)
Q Consensus 729 ~~~--~~~~v~~P~~~~~~ 745 (745)
|+| +.|.||+||+|++.
T Consensus 627 w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 627 WVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEETTSCCEEEEEEEEEEC
T ss_pred EEcCCCCeEEEEeEEEEEc
Confidence 998 99999999999873
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.5e-108 Score=952.74 Aligned_cols=600 Identities=43% Similarity=0.686 Sum_probs=505.0
Q ss_pred CCCCCCccCccCCCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCC-cccCcceeeeeeCCCCC
Q 042259 120 TTHSPNFLGLHQNSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEG-ANCNNKIIGARNFLNKS 198 (745)
Q Consensus 120 ~~~s~~~~g~~~~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~-~~~n~ki~~~~~~~~~~ 198 (745)
++++|+|+||++ .+|....+|+||+|||||||||++||+|.++++++++.+|+|.|+.+. ..||+|++++++|..+.
T Consensus 1 tt~s~~flGl~~--~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~ 78 (621)
T 3vta_A 1 TTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGR 78 (621)
T ss_dssp CCSHHHHTTCCT--TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSS
T ss_pred CCCChhHcCCCc--cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCC
Confidence 578999999964 688999999999999999999999999999999999999999999887 78999999999997653
Q ss_pred -------CCCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHhCCC
Q 042259 199 -------EPPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVEEGV 271 (745)
Q Consensus 199 -------~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~g~ 271 (745)
.+++|++||||||||||||+...+.+..|.+.|.++||||+|+|++||+|+ +.++..+++++||++|+++|+
T Consensus 79 ~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~-~~g~~~~di~~a~~~a~~~g~ 157 (621)
T 3vta_A 79 PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCW-NDGCSDTDILAAYDDAIADGV 157 (621)
T ss_dssp SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEE-TTEECHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeec-CCCCCHHHHHHHHHHHHHhCC
Confidence 456789999999999999998888888888888899999999999999999 888999999999999999999
Q ss_pred cEEEEccCCCC-CCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeee
Q 042259 272 DVLSISLGSPS-LPFFADAMATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYD 350 (745)
Q Consensus 272 dVIn~S~G~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~ 350 (745)
||||||||+.. ..+..++++.++++|.++|+++|+||||+|+...++++.+||+++|++++.++.+...+.++++..+.
T Consensus 158 dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~ 237 (621)
T 3vta_A 158 DIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQ 237 (621)
T ss_dssp SEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEE
T ss_pred CEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceee
Confidence 99999999875 45667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCCCCCceeeEecCCCC------CCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEec
Q 042259 351 GETIFQPKDFPSKQLPLVYPGVKN------SSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMN 424 (745)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n 424 (745)
+.++.... ...+++++..... .....|.+..+++.+++|||++| +++ +..+..+....|+.++++++
T Consensus 238 ~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~-~~~---~~~~~~~~~~~Ga~gvi~~~ 310 (621)
T 3vta_A 238 GVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVC-EAS---FGPHEFFKSLDGAAGVLMTS 310 (621)
T ss_dssp EBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEEC-SSC---CCHHHHHHHHTTCSEEEEEC
T ss_pred eeecccCC---CcccccccccccccccccccccccccccccccccccceEEEE-ecC---CChhHHhhhhcceeEEEEEe
Confidence 88876543 4456666654432 23567888899999999999999 665 34566777888999999998
Q ss_pred CCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeC
Q 042259 425 DELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGP 504 (745)
Q Consensus 425 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~AP 504 (745)
+... ..+.+.+|...++..++..++.|+.....+...+... +.......+.++.||||||+...++++||||+||
T Consensus 311 ~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~-~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~AP 385 (621)
T 3vta_A 311 NTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKS-TTILNASAPVVVSFSSRGPNRATKDVIKPDISGP 385 (621)
T ss_dssp SCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCC-EEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEE
T ss_pred cCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecc-eEeccCCCCceeeecCCCCCCCCCCeeccccccC
Confidence 7543 2456789999999999999999999998888877443 3444567889999999999988889999999999
Q ss_pred CccEEeccCCCC-ccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCC
Q 042259 505 GVSILAAWPFSE-ENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLP 583 (745)
Q Consensus 505 G~~I~sa~~~~~-~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 583 (745)
|++|+|+++... .........|..+||||||||||||+||||||+||+|+|++||++||+||++++..+ .+
T Consensus 386 G~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~--------~~ 457 (621)
T 3vta_A 386 GVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARF--------NP 457 (621)
T ss_dssp CSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTT--------CT
T ss_pred CcceEeecCccccccCcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccC--------CC
Confidence 999999998654 223344578999999999999999999999999999999999999999999876543 45
Q ss_pred CCCcccCCCCCCccCCCCCCcccccccccceeecccCCCCccceeeeecccccccccCcccccccCCCceeeecC---Cc
Q 042259 584 ADLFAVGAGHVNPSKANDPGLVYEISHDDYVRYLCGKNYTDQQIEGIVDHDVQCSKVSSIAEAELNYPSFSVKLG---SS 660 (745)
Q Consensus 584 ~~~~~~G~G~vn~~~A~~~~lv~d~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~---~~ 660 (745)
..++.||+|+||+.+|++||||||+..+||+.|||+++|+.++++.+++....|.........+||||||++.+. ..
T Consensus 458 ~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~ 537 (621)
T 3vta_A 458 QAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTF 537 (621)
T ss_dssp TTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSCCE
T ss_pred CCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEEEccCCCce
Confidence 678999999999999999999999999999999999999999999999999999876666788999999998754 33
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEEEEEcCceEEEeeE
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYLSWVSATHTVRSPI 740 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~~~~~~~v~~P~ 740 (745)
+++++|||||+|....+|+++++.|.|++|+|+|++|+|.+.+|+++|+|||+... .+.++||+|+|+|+.|.||+||
T Consensus 538 ~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~~--~~~~~~g~l~w~d~~h~Vr~Pi 615 (621)
T 3vta_A 538 NQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI--KGFVVSASLVWSDGVHYVRSPI 615 (621)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEECC--CSSEEEEEEEEECSSCCCEEEE
T ss_pred EEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEecC--CCceEEEEEEEEcCCEEEEeCE
Confidence 78999999999999999999999999999999999999999899999999998753 4579999999999999999999
Q ss_pred EEEe
Q 042259 741 AIGF 744 (745)
Q Consensus 741 ~~~~ 744 (745)
+|+.
T Consensus 616 ~v~~ 619 (621)
T 3vta_A 616 TITS 619 (621)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9974
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=2.6e-80 Score=744.79 Aligned_cols=530 Identities=23% Similarity=0.336 Sum_probs=419.9
Q ss_pred CCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccC--------------CcccCcceeeeeeCCCCC
Q 042259 133 SGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELE--------------GANCNNKIIGARNFLNKS 198 (745)
Q Consensus 133 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~--------------~~~~n~ki~~~~~~~~~~ 198 (745)
..+|..+++|+||+|||||||||++||+|.+. ..|++.|... ..+||+|++++++|.++.
T Consensus 7 ~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~ 80 (926)
T 1xf1_A 7 KTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG 80 (926)
T ss_dssp HHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS
T ss_pred HHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccCC
Confidence 34899999999999999999999999999853 3455554321 047999999999998763
Q ss_pred CCCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC--CCHHHHHHHHHHHHhCCCcEEEE
Q 042259 199 EPPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG--CPESIVNAAIDAAVEEGVDVLSI 276 (745)
Q Consensus 199 ~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g--~~~~~i~~ai~~a~~~g~dVIn~ 276 (745)
..+ |..||||||||||||+...+.+. .+.+.||||+|+|+++|+++ ..+ +...++++||+||+++|+|||||
T Consensus 81 ~~~-D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~-~~g~~~~~~~i~~Ai~~Ai~~gvdVIn~ 154 (926)
T 1xf1_A 81 KTA-VDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEI-VNGLADYARNYAQAIRDAINLGAKVINM 154 (926)
T ss_dssp CCC-CSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCC-CSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCC-CCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeec-CCCCCCcHHHHHHHHHHHHHhCCcEEEE
Confidence 333 89999999999999987554322 23468999999999999998 555 55678999999999999999999
Q ss_pred ccCCCC--CCChhhHHHHHHHHHhcCCcEEEEccCCCCCCC---------------CCcccCCCceEEEeecccccceEE
Q 042259 277 SLGSPS--LPFFADAMATAAFTASQKGILVSCSAGNSGPNS---------------STLANEAPWMLTVGASTIDRSIVA 339 (745)
Q Consensus 277 S~G~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~---------------~~~~~~~p~vitVga~~~~~~~~~ 339 (745)
|||+.. ...+.+.+..+++.|.++|++||+||||+|... ...++.+||+|+|||++.++.+..
T Consensus 155 SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~~~ 234 (926)
T 1xf1_A 155 SFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTE 234 (926)
T ss_dssp CCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEEEE
T ss_pred CCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEecccccccccc
Confidence 999864 334567788888899999999999999999632 123345899999999999999888
Q ss_pred EEEe-CCCeeeeeeeccCCCCC-CCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCc
Q 042259 340 LTQL-GNQETYDGETIFQPKDF-PSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGG 417 (745)
Q Consensus 340 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga 417 (745)
.+.+ +++....+.+++....+ ....+++++... .|.+..+ .+++|||++| +|+.|.+.+|..+++++|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------g~~~~~~--~~v~Gkivl~-~rg~~~~~~k~~~~~~~Ga 305 (926)
T 1xf1_A 235 TVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------GTKEDDF--KDVKGKIALI-ERGDIDFKDKIAKAKKAGA 305 (926)
T ss_dssp EEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------SCSTTTT--TTCTTSEEEE-ECCSSCHHHHHHHHHHTTC
T ss_pred ceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------CCCccch--hhcCCeEEEE-ECCCCCHHHHHHHHHhCCC
Confidence 8877 55555555554433222 456799999764 3766655 6899999999 9999999999999999999
Q ss_pred eEEEEecCCCCCcc-ccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceE--ecCCCCCceecccCCCCCCCCC
Q 042259 418 AAMILMNDELFDYG-TVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTV--IGKKSAPEVAVFSSRGPNTASP 494 (745)
Q Consensus 418 ~g~i~~n~~~~~~~-~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~a~fSS~GP~~~~~ 494 (745)
.|+|++|+...... .......+|.+.++..+|..|+. .+..+|++..+. ++....+.++.||||||+. +
T Consensus 306 ~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~--~ 377 (926)
T 1xf1_A 306 VGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLPTASGTKLSRFSSWGLTA--D 377 (926)
T ss_dssp SEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEECSSCSBCCTTSCCCBCT--T
T ss_pred cEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecccCCcceeccccCCCCCC--C
Confidence 99999998654332 23346789999999999998874 345667776643 5556678999999999997 8
Q ss_pred CCccCceEeCCccEEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHH----hhCCCCCHHH----HHHHHhccc
Q 042259 495 GILKPDIIGPGVSILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLK----SAHPDWSPAA----IKSAIMTTA 566 (745)
Q Consensus 495 g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----q~~p~~s~~~----ik~~L~~TA 566 (745)
+++||||+|||++|+++++. +.|..+||||||||||||+||||+ +.||+|+|+| ||++||+||
T Consensus 378 ~~lKPDI~APG~~I~sa~~~---------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA 448 (926)
T 1xf1_A 378 GNIKPDIAAPGQDILSSVAN---------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSA 448 (926)
T ss_dssp SCBSCCEEEECCCEEESSSC---------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHS
T ss_pred CccCceEECCCCCEEeeccC---------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999987 789999999999999999999996 4699999997 999999999
Q ss_pred ccccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCcccccccccceeecccCCCCccceeeeecccccccccCccccc
Q 042259 567 DIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKANDPGLVYEISHDDYVRYLCGKNYTDQQIEGIVDHDVQCSKVSSIAEA 646 (745)
Q Consensus 567 ~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~lv~d~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (745)
+++...+. ...+++++||+|+||+.+|+++.+ |+|..+++...|
T Consensus 449 ~~~~~~~~------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~i------------------- 492 (926)
T 1xf1_A 449 TALYDEDE------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSSKV------------------- 492 (926)
T ss_dssp BCCEEGGG------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCSCE-------------------
T ss_pred CCcccCCC------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCccee-------------------
Confidence 98754321 224678899999999999999843 678765543221
Q ss_pred ccCCCceeeecCCccEEEEEEEEecCCCC--eeEEEEEEC--CCCeEEEEEcCeEEEeeC-------CceEEEEEEEEec
Q 042259 647 ELNYPSFSVKLGSSPQTYNRTVTNVGQDN--SFYTHHIIV--PEGVKIIVQPDKISFTEK-------NQKATFSVTFIRD 715 (745)
Q Consensus 647 ~ln~ps~~~~~~~~~~~~~~tv~n~~~~~--~ty~~~~~~--~~g~~v~v~p~~~~~~~~-------g~~~~~~v~~~~~ 715 (745)
.+.......+++|||||+|+.. .+|++++.. |.+..++|+|..|.+... ||+++|+|||++.
T Consensus 493 -------~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~ 565 (926)
T 1xf1_A 493 -------HLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDAS 565 (926)
T ss_dssp -------EEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECH
T ss_pred -------eccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcC
Confidence 2221123578899999999864 567777654 668888888876655433 9999999999986
Q ss_pred c--------CCCCCeEEEEEEEE--cCceE-EEeeEEEE
Q 042259 716 Q--------NSNASSVQGYLSWV--SATHT-VRSPIAIG 743 (745)
Q Consensus 716 ~--------~~~~~~~~G~~~~~--~~~~~-v~~P~~~~ 743 (745)
. .+.+.++||+|+|+ ++.|. ||+||++.
T Consensus 566 ~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~ 604 (926)
T 1xf1_A 566 RFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGF 604 (926)
T ss_dssp HHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred ccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEE
Confidence 2 23446899999999 56665 99999985
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1e-61 Score=550.70 Aligned_cols=365 Identities=33% Similarity=0.486 Sum_probs=291.7
Q ss_pred CCceEEEEeCCCCCCCCccccccHHHHHHhhcccccccccccccccceEEEecceeeEEEEEeCHHHHHHh---------
Q 042259 31 GLQTYIVHVRKPKQEGNFSIKLDLDNWYRTFLPDNISKSIDAHHRSRMVYGYRNVISGFAARLTAEEVKAM--------- 101 (745)
Q Consensus 31 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L--------- 101 (745)
.+.+|||.|++... .. .+.+++++ .+.++.++|. .++||+++++.+++++|
T Consensus 34 ~~~~~iV~~~~~~~------~~----~~~~~~~~---------~g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~ 93 (539)
T 3afg_A 34 QEVSTIIMFDNQAD------KE----KAVEILDF---------LGAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYF 93 (539)
T ss_dssp CEEEEEEEESSHHH------HH----HHHHHHHH---------HTCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC--
T ss_pred CceEEEEEECCCCC------HH----HHHHHHHh---------cCCeEEEEee-eeeEEEEEeCHHHHHHHHhhcccccc
Confidence 45679999987543 11 12223332 2468889997 79999999999999999
Q ss_pred --hcCCCeEEEEEccccCCCCCCC--CCccCccCCCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCcccccc
Q 042259 102 --ETKSGFISARVENILEPQTTHS--PNFLGLHQNSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKC 177 (745)
Q Consensus 102 --~~~p~V~~v~~~~~~~~~~~~s--~~~~g~~~~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~ 177 (745)
+++|+|++|++++.+++..... ...+.......+|..+++|+||+|||||||||++||+|.+
T Consensus 94 ~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~-------------- 159 (539)
T 3afg_A 94 GNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG-------------- 159 (539)
T ss_dssp -CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT--------------
T ss_pred ccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC--------------
Confidence 8899999999999887753221 1112222356699999999999999999999999999975
Q ss_pred ccCCcccCcceeeeeeCCCCCCCCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCH
Q 042259 178 ELEGANCNNKIIGARNFLNKSEPPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPE 256 (745)
Q Consensus 178 ~~~~~~~n~ki~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~ 256 (745)
++++.++|.++...+.|++||||||||||+|+... ..|.+.||||+|+|+.+|+++ ..+ +..
T Consensus 160 ---------~i~~~~d~~~~~~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~-~~g~~~~ 222 (539)
T 3afg_A 160 ---------KVIGWVDFVNGKTTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLN-GQGSGSI 222 (539)
T ss_dssp ---------TEEEEEETTTCCSSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSC-TTSEEEH
T ss_pred ---------CEeeeEECCCCCCCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeec-CCCCcCH
Confidence 36677888776567789999999999999987432 123358999999999999998 555 788
Q ss_pred HHHHHHHHHHHhC----CCcEEEEccCCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCC--CcccCCCceEEEee
Q 042259 257 SIVNAAIDAAVEE----GVDVLSISLGSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPNSS--TLANEAPWMLTVGA 330 (745)
Q Consensus 257 ~~i~~ai~~a~~~----g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~p~vitVga 330 (745)
+++++||+||+++ |++|||||||........+.+..++.++.++|+++|+||||+|.... ..++.++++|+|||
T Consensus 223 ~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA 302 (539)
T 3afg_A 223 SDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGA 302 (539)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEE
T ss_pred HHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEee
Confidence 9999999999986 89999999998754445677888888999999999999999998643 45678899999999
Q ss_pred cccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhh
Q 042259 331 STIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGK 410 (745)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~ 410 (745)
++.
T Consensus 303 ~~~----------------------------------------------------------------------------- 305 (539)
T 3afg_A 303 VDK----------------------------------------------------------------------------- 305 (539)
T ss_dssp ECT-----------------------------------------------------------------------------
T ss_pred ecC-----------------------------------------------------------------------------
Confidence 521
Q ss_pred hHhhcCceEEEEecCCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCC
Q 042259 411 DVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPN 490 (745)
Q Consensus 411 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~ 490 (745)
.+.+++||||||+
T Consensus 306 -------------------------------------------------------------------~~~~a~fSs~Gp~ 318 (539)
T 3afg_A 306 -------------------------------------------------------------------YDVITDFSSRGPT 318 (539)
T ss_dssp -------------------------------------------------------------------TSCBCSSSCCCCC
T ss_pred -------------------------------------------------------------------CcccccccCCCCC
Confidence 1267899999999
Q ss_pred CCCCCCccCceEeCCccEEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhccccccc
Q 042259 491 TASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVN 570 (745)
Q Consensus 491 ~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 570 (745)
. ++++||||+|||++|+++++............|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 319 ~--~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~ 396 (539)
T 3afg_A 319 A--DNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVK 396 (539)
T ss_dssp T--TCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSS
T ss_pred C--CCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 8 78999999999999999986532111112236999999999999999999999999999999999999999999775
Q ss_pred CCCCcccCCCCCCCCCcccCCCCCCccCCCCC
Q 042259 571 LEGKPIMNHHLLPADLFAVGAGHVNPSKANDP 602 (745)
Q Consensus 571 ~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~ 602 (745)
..+ .+++.||+|+||+.+|++.
T Consensus 397 ~~~----------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 397 PDE----------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp GGG----------CSBTTTBTCBCCHHHHHTG
T ss_pred CCC----------CCccCccCCccCHHHHhhh
Confidence 321 2466899999999999984
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.5e-58 Score=508.50 Aligned_cols=336 Identities=27% Similarity=0.392 Sum_probs=274.3
Q ss_pred CceEEEEeCCCCCCCCccccccHHHHHHhhcccccccccccccccceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEE
Q 042259 32 LQTYIVHVRKPKQEGNFSIKLDLDNWYRTFLPDNISKSIDAHHRSRMVYGYRNVISGFAARLTAEEVKAMETKSGFISAR 111 (745)
Q Consensus 32 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~ 111 (745)
+.+|||.||+... . . ++++ ..+.++.+.|. .+++|+++++++++++|+++|+|++|+
T Consensus 2 ~~~~iV~~~~~~~--~-------~----~~~~---------~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~ 58 (395)
T 2z2z_A 2 TIRVIVSVDKAKF--N-------P----HEVL---------GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVE 58 (395)
T ss_dssp EEEEEEEECTTTC--C-------H----HHHH---------HTTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEE
T ss_pred cEEEEEEECCCcc--H-------H----HHHH---------HcCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEE
Confidence 5789999998742 1 1 1222 23668899998 599999999999999999999999999
Q ss_pred EccccCCCCCCC-----------CCccCccC--CCCCccCCCCCCc--cEEEEecCCCCCCCCCCCCCCCCCCCCccccc
Q 042259 112 VENILEPQTTHS-----------PNFLGLHQ--NSGFWKDSNLGKG--VIIGVLDMGITPGHPSFSDEGMPPPPAKWKGK 176 (745)
Q Consensus 112 ~~~~~~~~~~~s-----------~~~~g~~~--~~~~~~~~~~G~g--v~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~ 176 (745)
+++.++++.... ...|++.. ...+|..+ +|+| |+|+|||||||++||+|.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~------------ 125 (395)
T 2z2z_A 59 FDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------ 125 (395)
T ss_dssp ECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG------------
T ss_pred EeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc------------
Confidence 999887643211 12354433 45689998 9999 99999999999999999853
Q ss_pred cccCCcccCcceeeeeeCCCCC-----CCCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCC
Q 042259 177 CELEGANCNNKIIGARNFLNKS-----EPPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETD 251 (745)
Q Consensus 177 ~~~~~~~~n~ki~~~~~~~~~~-----~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~ 251 (745)
+...++|..+. .+..|+.||||||||||+|.. + ..+ +.||||+|+|+.+|+++ .
T Consensus 126 -----------~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~-n-------~~g-~~GvAp~a~l~~~kv~~-~ 184 (395)
T 2z2z_A 126 -----------IAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALN-N-------DIG-VVGVAPGVQIYSVRVLD-A 184 (395)
T ss_dssp -----------EEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCC-S-------SSS-CCCSSTTCEEEEEECSC-T
T ss_pred -----------cccCccccCCcccCCCCCCCCCCCCHHHHHHHHHeec-C-------CCc-eEEECCCCEEEEEEEec-C
Confidence 33445554331 124688999999999999873 1 111 47999999999999998 5
Q ss_pred CC-CCHHHHHHHHHHHHhC--------------------CCcEEEEccCCCCCCChhhHHHHHHHHHhcCCcEEEEccCC
Q 042259 252 LG-CPESIVNAAIDAAVEE--------------------GVDVLSISLGSPSLPFFADAMATAAFTASQKGILVSCSAGN 310 (745)
Q Consensus 252 ~g-~~~~~i~~ai~~a~~~--------------------g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN 310 (745)
.+ +..+++++||+||+++ +++|||||||+... ...+..++.++.++|+++|+||||
T Consensus 185 ~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN 261 (395)
T 2z2z_A 185 RGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGN 261 (395)
T ss_dssp TSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEECCC
Confidence 55 7788999999999988 99999999998642 244555666888999999999999
Q ss_pred CCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcc
Q 042259 311 SGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDV 390 (745)
Q Consensus 311 ~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 390 (745)
+|.....+|+..+++|+|||++
T Consensus 262 ~g~~~~~~Pa~~~~vi~Vga~~---------------------------------------------------------- 283 (395)
T 2z2z_A 262 EGAPSPSYPAAYPEVIAVGAID---------------------------------------------------------- 283 (395)
T ss_dssp SCCSSCCBTTTSTTEEEEEEEC----------------------------------------------------------
T ss_pred CCCCCCCCccCCCCEEEEEEec----------------------------------------------------------
Confidence 9998888899999999999952
Q ss_pred cceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecc
Q 042259 391 KGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKG 470 (745)
Q Consensus 391 ~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 470 (745)
T Consensus 284 -------------------------------------------------------------------------------- 283 (395)
T 2z2z_A 284 -------------------------------------------------------------------------------- 283 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhC
Q 042259 471 TVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAH 550 (745)
Q Consensus 471 ~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~ 550 (745)
..+.+++||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+|++
T Consensus 284 ------~~~~~a~fS~~G~----------~v~APG~~i~s~~~~---------~~y~~~sGTS~AaP~VaG~aAll~~~~ 338 (395)
T 2z2z_A 284 ------SNDNIASFSNRQP----------EVSAPGVDILSTYPD---------DSYETLMGTAMATPHVSGVVALIQAAY 338 (395)
T ss_dssp ------TTSCBCTTSCSSC----------SEEEECSSEEEEETT---------TEEEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCcccCCCC----------CEEeCCCCeeeecCC---------CceEecCCHHHHHHHHHHHHHHHHHhC
Confidence 1126789999997 679999999999987 789999999999999999999999999
Q ss_pred C-------------CCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCC
Q 042259 551 P-------------DWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKAND 601 (745)
Q Consensus 551 p-------------~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 601 (745)
| .|++.+||++|++||+++... ..+..||||+||+.+|++
T Consensus 339 p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G~vd~~~A~~ 391 (395)
T 2z2z_A 339 YQKYGKILPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQ 391 (395)
T ss_dssp HHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHH
T ss_pred ccccccccccccccCCCHHHHHHHHHhhccccCCC-----------CCCCCccCceeCHHHHHH
Confidence 9 999999999999999987432 345789999999999986
No 6
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=9.1e-59 Score=528.10 Aligned_cols=335 Identities=19% Similarity=0.234 Sum_probs=60.2
Q ss_pred CceEEEEeCCCCCCCCccccccHHHHHHhhcccccccccccccccceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEE
Q 042259 32 LQTYIVHVRKPKQEGNFSIKLDLDNWYRTFLPDNISKSIDAHHRSRMVYGYRNVISGFAARLTAEEVKAMETKSGFISAR 111 (745)
Q Consensus 32 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~ 111 (745)
+++|||+||++..... ...+.+++...+.+. ....++.+.|++.|+||+++++++++++|+++|+|++||
T Consensus 75 pg~YIV~lk~~~~~~~---~~~~~~~l~a~~~~~-------g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Ve 144 (692)
T 2p4e_P 75 PGTYVVVLKEETHLSQ---SERTARRLQAQAARR-------GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIE 144 (692)
T ss_dssp EEEEEEEECTTCCHHH---HHHHHHHHHHHHHHT-------TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEE
T ss_pred CCcEEEEECCCCCHHH---HHHHHHHHHHHHhhc-------ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEE
Confidence 5699999999876433 334444444433322 235689999999999999999999999999999999999
Q ss_pred EccccCCCCCCCCCccCccCC------CCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccC
Q 042259 112 VENILEPQTTHSPNFLGLHQN------SGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCN 185 (745)
Q Consensus 112 ~~~~~~~~~~~s~~~~g~~~~------~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n 185 (745)
+++.++... ..|++.+. ...|..+.+|+||+|+|||||||++||+|.++... ..|+...+
T Consensus 145 pd~~v~~~~----~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~~---~~~~~~~d------- 210 (692)
T 2p4e_P 145 EDSSVFAQS----IPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVMV---TDFENVPE------- 210 (692)
T ss_dssp EEEEEEEC------------------------------------------------------------------------
T ss_pred eccccccCC----CCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceEe---cccccccC-------
Confidence 999875421 12555431 23688888999999999999999999999875210 00100000
Q ss_pred cceeeeeeCCCCCCCCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHH
Q 042259 186 NKIIGARNFLNKSEPPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAID 264 (745)
Q Consensus 186 ~ki~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~ 264 (745)
..+..|. ..+.|.+||||||||||+|+. .||||+|+|+++|+++ ..| ++.+++++||+
T Consensus 211 ---~dg~~~~---~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~-~~G~g~~s~ii~aI~ 269 (692)
T 2p4e_P 211 ---EDGTRFH---RQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLN-CQGKGTVSGTLIGLE 269 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---CCCCccc---CCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeec-CCCCCCHHHHHHHHH
Confidence 0000111 345688999999999999873 6999999999999998 555 78889999999
Q ss_pred HHHhC------CCcEEEEccCCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCCC-cccCCCceEEEeecccccce
Q 042259 265 AAVEE------GVDVLSISLGSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPNSST-LANEAPWMLTVGASTIDRSI 337 (745)
Q Consensus 265 ~a~~~------g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVga~~~~~~~ 337 (745)
|++++ +++|||||||+..+. .+..++.++.++|+++|+||||+|.+... +++..+++|+|||++.+...
T Consensus 270 ~a~~~~~~~~~g~~VINmSlGg~~s~----~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~ 345 (692)
T 2p4e_P 270 FIRKSQLVQPVGPLVVLLPLAGGYSR----VLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhhhhcccCCceEEEecCCCCCcH----HHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc
Confidence 99986 899999999976433 34445557889999999999999987643 47889999999996421100
Q ss_pred EEEEEeCCCeeeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCc
Q 042259 338 VALTQLGNQETYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGG 417 (745)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga 417 (745)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecCCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCc
Q 042259 418 AAMILMNDELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGIL 497 (745)
Q Consensus 418 ~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~ 497 (745)
...-+.||+|||.
T Consensus 346 ------------------------------------------------------------a~~ss~fSn~G~~------- 358 (692)
T 2p4e_P 346 ------------------------------------------------------------VTLGTLGTNFGRC------- 358 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------cccccccCCCCCc-------
Confidence 0001238999984
Q ss_pred cCceEeCCccEEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhccccccc
Q 042259 498 KPDIIGPGVSILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVN 570 (745)
Q Consensus 498 KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 570 (745)
|||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|++||++|++||.+..
T Consensus 359 -vDI~APG~~I~St~~~~~-------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 359 -VDLFAPGEDIIGASSDCS-------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp -------------------------------------------------------------------------
T ss_pred -eeEEecCCcEEeeccCCC-------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 599999999999998632 57899999999999999999999999999999999999999997643
No 7
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=6.5e-56 Score=500.11 Aligned_cols=333 Identities=22% Similarity=0.257 Sum_probs=264.2
Q ss_pred ccceEEEecceeeEEEEEeCHHHHHHhhc-CCCeEEEEEccccCCCCCCCC----------CccCccC---CCCCccCCC
Q 042259 75 RSRMVYGYRNVISGFAARLTAEEVKAMET-KSGFISARVENILEPQTTHSP----------NFLGLHQ---NSGFWKDSN 140 (745)
Q Consensus 75 ~~~v~~~y~~~~~g~s~~l~~~~~~~L~~-~p~V~~v~~~~~~~~~~~~s~----------~~~g~~~---~~~~~~~~~ 140 (745)
+.++.+.|. .+++|+++++++++++|++ +|+|++|++++.+++...... ..|++.. ...+|..+.
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~ 143 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLP 143 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCC
T ss_pred CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhccC
Confidence 567888886 5999999999999999999 999999999988877543221 1344433 236899999
Q ss_pred CCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeee-CCCCCCCCCCCCCChhhhhhhhcccc
Q 042259 141 LGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARN-FLNKSEPPIDNDGHGTHTASTAAGNF 219 (745)
Q Consensus 141 ~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~-~~~~~~~~~d~~gHGThVAGiiag~~ 219 (745)
+|+||+|||||||||++||+|.++... +....- ....+.+... ...+...+.|..||||||||||+|+.
T Consensus 144 ~G~gv~VaViDtGid~~Hp~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g 213 (471)
T 3t41_A 144 KHANTKIAIIDTGVMKNHDDLKNNFST-------DSKNLV---PLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANG 213 (471)
T ss_dssp SSCCCCEEEEESCCCTTCTTTTTTBCT-------TCEECC---CTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBS
T ss_pred CCCCcEEEEEeCCCCCCChhHhcCccc-------CCcccc---cCCCccCCCcccCCCCCCCcCCCCccchhhheeecCC
Confidence 999999999999999999999874211 100000 0000000000 11111356788999999999999863
Q ss_pred cCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCC-------------CCh
Q 042259 220 VNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVEEGVDVLSISLGSPSL-------------PFF 286 (745)
Q Consensus 220 ~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~g~dVIn~S~G~~~~-------------~~~ 286 (745)
. +.||||+|+|+.+|+++ ...+...++++||+||++++++|||||||.... ...
T Consensus 214 ~------------~~GvAp~a~l~~~kv~~-~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~ 280 (471)
T 3t41_A 214 K------------LIGVAPNNKFTMYRVFG-SKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVE 280 (471)
T ss_dssp S------------SBCSSTTSCEEEEECCS-SSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHH
T ss_pred c------------eeEECCCCeEEEEEecc-CCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchh
Confidence 1 47999999999999998 667889999999999999999999999997320 133
Q ss_pred hhHHHHHHHHHhcCCcEEEEccCCCCCCCCC------------------cccCCCceEEEeecccccceEEEEEeCCCee
Q 042259 287 ADAMATAAFTASQKGILVSCSAGNSGPNSST------------------LANEAPWMLTVGASTIDRSIVALTQLGNQET 348 (745)
Q Consensus 287 ~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~------------------~~~~~p~vitVga~~~~~~~~~~~~~~~~~~ 348 (745)
.+.+..++..+.++|++||+||||+|..... +++.++++|+|||++.
T Consensus 281 ~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~--------------- 345 (471)
T 3t41_A 281 YDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ--------------- 345 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT---------------
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCC---------------
Confidence 4667778888889999999999999987542 6678899999998521
Q ss_pred eeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCC
Q 042259 349 YDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELF 428 (745)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 428 (745)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCcc-
Q 042259 429 DYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVS- 507 (745)
Q Consensus 429 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~- 507 (745)
.+.+++||++||+. |||+|||++
T Consensus 346 -------------------------------------------------~~~~a~fS~~G~~~-------~di~APG~~i 369 (471)
T 3t41_A 346 -------------------------------------------------KSNLSEFSNFGMNY-------TDIAAPGGSF 369 (471)
T ss_dssp -------------------------------------------------TSSBCTTCCBCTTT-------CCEEEECCCC
T ss_pred -------------------------------------------------CCCCCCccCCCCCC-------CeEEecCCCc
Confidence 12678999999974 599999987
Q ss_pred ---------------------EEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhCC-CCCHHHHHHHHhcc
Q 042259 508 ---------------------ILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHP-DWSPAAIKSAIMTT 565 (745)
Q Consensus 508 ---------------------I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-~~s~~~ik~~L~~T 565 (745)
|+++++. +.|..++|||||||||||++|||+|++| .++|++||++|++|
T Consensus 370 ~~~~~~g~~~~~~~~~~~~~~i~s~~~~---------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~t 440 (471)
T 3t41_A 370 AYLNQFGVDKWMNEGYMHKENILTTANN---------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQH 440 (471)
T ss_dssp HHHHHHHHHHHHHTTTHHHHSEEEECTT---------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred ccccccccccccccccccCceeEecCCC---------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHh
Confidence 8999887 7899999999999999999999999999 89999999999999
Q ss_pred cccccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCC
Q 042259 566 ADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKANDPG 603 (745)
Q Consensus 566 A~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~ 603 (745)
|++... .++..||||+||+.+|++..
T Consensus 441 A~~~~~------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 441 GTSKNN------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp SBCCSC------------CCHHHHTTCBBCHHHHTTTT
T ss_pred CCCCCC------------CCcCccccChhCHHHHHHHH
Confidence 987532 35678999999999999853
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.1e-55 Score=490.34 Aligned_cols=379 Identities=25% Similarity=0.364 Sum_probs=276.1
Q ss_pred cCccC--CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCC--CCCCC
Q 042259 127 LGLHQ--NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNK--SEPPI 202 (745)
Q Consensus 127 ~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~--~~~~~ 202 (745)
|++.+ ...+|+.+ |+||+|+|||||||++||+|.++ ++..+++... ...+.
T Consensus 6 W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-----------------------~~~~~~~~~~~~~~~~~ 60 (441)
T 1y9z_A 6 WGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-----------------------NVTGTNNSGTGNWYQPG 60 (441)
T ss_dssp HHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-----------------------EEEECCCTTSCCTTCCC
T ss_pred CChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-----------------------cccCcccCCCCCCCCCC
Confidence 44433 45688865 78999999999999999999853 1222223211 13567
Q ss_pred CCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCc--eEEeeecccCCCC-CCHHHHHHHHHHHHhC-CCcEEEEcc
Q 042259 203 DNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLA--HLAIYKVCETDLG-CPESIVNAAIDAAVEE-GVDVLSISL 278 (745)
Q Consensus 203 d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A--~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~-g~dVIn~S~ 278 (745)
|..||||||||||+|... ..+ +.||||+| +|+.+|+++ ..+ +..+++++||+||+++ |++||||||
T Consensus 61 d~~gHGT~vAgiia~~~~--------~~g-~~GvAP~a~~~l~~~kv~~-~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~ 130 (441)
T 1y9z_A 61 NNNAHGTHVAGTIAAIAN--------NEG-VVGVMPNQNANIHIVKVFN-EAGWGYSSSLVAAIDTCVNSGGANVVTMSL 130 (441)
T ss_dssp SSCCHHHHHHHHHHCCCS--------SSB-CCCSSCSSCSEEEEEECEE-TTEECCSSCHHHHHHHHHHTTCCSEEEECC
T ss_pred CCCCcHHHHHHHHhcccC--------CCC-ceEecCCCCCEEEEEEEeC-CCCCcCHHHHHHHHHHHHHhcCCcEEEeCC
Confidence 889999999999999742 122 48999995 999999998 655 7888999999999999 999999999
Q ss_pred CCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceE-------------------E
Q 042259 279 GSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIV-------------------A 339 (745)
Q Consensus 279 G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~-------------------~ 339 (745)
|..... ..+..++.++.++|+++|+||||+|.....+++..+++|+|||++.+.... .
T Consensus 131 G~~~~~---~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i~s 207 (441)
T 1y9z_A 131 GGSGST---TTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILS 207 (441)
T ss_dssp CBSCCB---HHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSEEE
T ss_pred CCCCCC---HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCeec
Confidence 986432 344556668889999999999999998888899999999999987764321 1
Q ss_pred EEEeCCCe----eeeeeeccCCCCCCCCc-ee--eEecCC-----CCCCCCccCCC--CCCCCcccceEEEEeeCCCc--
Q 042259 340 LTQLGNQE----TYDGETIFQPKDFPSKQ-LP--LVYPGV-----KNSSAAFCLPE--TLKSIDVKGKVVLCQRGGGT-- 403 (745)
Q Consensus 340 ~~~~~~~~----~~~~~~~~~~~~~~~~~-~~--~~~~~~-----~~~~~~~c~~~--~~~~~~~~g~ivl~~~~g~~-- 403 (745)
.+..+++. ++.|.+++.....+... ++ +.|... .......|... .+++.+++|||++| +|+.|
T Consensus 208 ~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~-~rg~~~~ 286 (441)
T 1y9z_A 208 TVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLV-ERVGNQG 286 (441)
T ss_dssp ECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEE-ECCSCSS
T ss_pred cccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEE-eccccCc
Confidence 11112221 22333333211100000 00 011000 00123457643 56788999999999 99876
Q ss_pred ---chhhhhhhHhhcCceEEEEecCCCCCc------cccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEec
Q 042259 404 ---QRIRKGKDVKDAGGAAMILMNDELFDY------GTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIG 474 (745)
Q Consensus 404 ---~~~~~~~~~~~~Ga~g~i~~n~~~~~~------~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~ 474 (745)
.+.+|..+++++|+.|+|++|+..... ........+|.+.++..+|..|+.++.+. .+
T Consensus 287 ~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~t--------- 353 (441)
T 1y9z_A 287 SSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----TT--------- 353 (441)
T ss_dssp SSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----EE---------
T ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----cc---------
Confidence 678899999999999999998754211 11223568999999999999999876321 11
Q ss_pred CCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCC
Q 042259 475 KKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWS 554 (745)
Q Consensus 475 ~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s 554 (745)
+ ++... ..|..++|||||||||||++|||+|+||+|+
T Consensus 354 --------------------------~--------~~~~~---------~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s 390 (441)
T 1y9z_A 354 --------------------------V--------SNQGN---------QDYEYYNGTSMATPHVSGVATLVWSYHPECS 390 (441)
T ss_dssp --------------------------E--------EEEEE---------ESEEEECSHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred --------------------------c--------ccccC---------CCceeecccccCCcccchHHHHHHHHCCCCC
Confidence 1 11112 6899999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCcccccccccceeecccCCC
Q 042259 555 PAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKANDPGLVYEISHDDYVRYLCGKNY 622 (745)
Q Consensus 555 ~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~lv~d~~~~d~~~~~~~~~~ 622 (745)
|++||++||+||++++..+ .+..||+|+||+.+|++ |+.|||++++
T Consensus 391 p~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~~-----------~~~~lc~~~~ 436 (441)
T 1y9z_A 391 ASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAKA-----------YLDESCTGPT 436 (441)
T ss_dssp HHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHHH-----------HHHHCTTCC-
T ss_pred HHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHHH-----------HHHhhhcCCC
Confidence 9999999999999886543 35679999999999964 8999999865
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=8.9e-55 Score=498.95 Aligned_cols=371 Identities=22% Similarity=0.285 Sum_probs=272.5
Q ss_pred CCCCceEEEEeCCCCCCCCccccccHHHHHHhhcccccccccccccccceEEEecceeeEEEEEeCH----HHHHHhh--
Q 042259 29 ANGLQTYIVHVRKPKQEGNFSIKLDLDNWYRTFLPDNISKSIDAHHRSRMVYGYRNVISGFAARLTA----EEVKAME-- 102 (745)
Q Consensus 29 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~----~~~~~L~-- 102 (745)
...+++|||.||+... . +++++. .+.++.+++. .+++++++++. +.+++|+
T Consensus 28 ~~~~~~~IV~~k~~~~---------~----~~~~~~---------~g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~ 84 (671)
T 1r6v_A 28 EYTEGKILVGYNDRSE---------V----DKIVKA---------VNGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKAL 84 (671)
T ss_dssp SBCTTEEEEEESSHHH---------H----HHHHHH---------HTCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTS
T ss_pred ccCCccEEEEECCCcC---------H----HHHHHh---------cCCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhc
Confidence 4578999999996421 1 122221 2456777776 68999999864 3356675
Q ss_pred cCCCeEEEEEccccCCCCC----C-----------------------CCCccCccC--CCCC-ccCCCCCCccEEEEecC
Q 042259 103 TKSGFISARVENILEPQTT----H-----------------------SPNFLGLHQ--NSGF-WKDSNLGKGVIIGVLDM 152 (745)
Q Consensus 103 ~~p~V~~v~~~~~~~~~~~----~-----------------------s~~~~g~~~--~~~~-~~~~~~G~gv~VaVIDt 152 (745)
++|+|++|||+..+++... . ....|++.. ...+ |+. .+|+||+||||||
T Consensus 85 ~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDT 163 (671)
T 1r6v_A 85 ALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDT 163 (671)
T ss_dssp CCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEES
T ss_pred cCCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeC
Confidence 4899999999976543210 0 011244332 3445 888 8999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCCCCChhhhhhhhcccccCCCcccCCCCcc
Q 042259 153 GITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDNDGHGTHTASTAAGNFVNGANLFGQANGT 232 (745)
Q Consensus 153 Gid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~ 232 (745)
|||++||+|.++- +.+.... . .... ....+..|.+||||||||||||... ..|
T Consensus 164 GVd~~HpdL~~~~-------~~g~~~~---------~-~~~~-p~~~d~~d~~gHGThVAGiIAa~~n--------g~g- 216 (671)
T 1r6v_A 164 GVDGTHPDLEGQV-------IAGYRPA---------F-DEEL-PAGTDSSYGGSAGTHVAGTIAAKKD--------GKG- 216 (671)
T ss_dssp CCBTTSGGGTTTB-------CCEEEGG---------G-TEEE-CTTCBCCTTCSHHHHHHHHHHCCCS--------SSS-
T ss_pred CCCCCCccccccE-------Eeccccc---------C-CCcC-CCCCCCccCCCcchhhhhhhhccCC--------CCc-
Confidence 9999999998641 1110000 0 0000 0112345678999999999998731 112
Q ss_pred eeeeccCceEEeeecccC-----CCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCCCCChhhHHHHHHHHHhcCCcEEEE
Q 042259 233 AAGMAPLAHLAIYKVCET-----DLG-CPESIVNAAIDAAVEEGVDVLSISLGSPSLPFFADAMATAAFTASQKGILVSC 306 (745)
Q Consensus 233 ~~GvAP~A~l~~~kv~~~-----~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~ 306 (745)
+.||||+|+|+.+|+++. ..+ .....+++||+||+++|++|||||||+.. +...+..++..+.++|+++|+
T Consensus 217 v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~Ai~~A~~~GvlvVa 293 (671)
T 1r6v_A 217 IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEAFDYAMEHGVVMVV 293 (671)
T ss_dssp CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHHHHHHHhCCCEEEE
Confidence 479999999999999983 123 44567999999999999999999999853 234566677788899999999
Q ss_pred ccCCCCCCC-CCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCC
Q 042259 307 SAGNSGPNS-STLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETL 385 (745)
Q Consensus 307 AAGN~g~~~-~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 385 (745)
||||+|... ..+|+..+++|+|||++.+..
T Consensus 294 AAGN~g~~~~~~yPA~~~~VItVgA~d~~g~------------------------------------------------- 324 (671)
T 1r6v_A 294 SAGNNTSDSHHQYPAGYPGVIQVAALDYYGG------------------------------------------------- 324 (671)
T ss_dssp ECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-------------------------------------------------
T ss_pred eCCCCCCCCCccCcccCCCeEEEEEEcCCCC-------------------------------------------------
Confidence 999999875 567888999999999531110
Q ss_pred CCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEE
Q 042259 386 KSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTAS 465 (745)
Q Consensus 386 ~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~ 465 (745)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCcc---------CCCcccceeeeccccchh
Q 042259 466 IVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEEN---------ITNTKSTFTMISGTSMSC 536 (745)
Q Consensus 466 i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~---------~~~~~~~y~~~sGTSmAa 536 (745)
...+++||++||.. ||+|||++|+++++..... .....+.|..++||||||
T Consensus 325 ------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAA 384 (671)
T 1r6v_A 325 ------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAA 384 (671)
T ss_dssp ------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHH
T ss_pred ------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEecCccHHH
Confidence 01478999999976 9999999999998763210 011235799999999999
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCcccccccccc
Q 042259 537 PHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKANDPGLVYEISHDDY 613 (745)
Q Consensus 537 P~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~lv~d~~~~d~ 613 (745)
|||||+||||+|++|++++.+||++|++||+++... ..+..||||+||+.+|++..+..+....+|
T Consensus 385 P~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~-----------g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 385 PHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN-----------GWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp HHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS-----------SCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC-----------CCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 999999999999999999999999999999987543 245689999999999999887776555444
No 10
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.5e-52 Score=437.94 Aligned_cols=262 Identities=32% Similarity=0.508 Sum_probs=220.6
Q ss_pred cCccC--CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCC
Q 042259 127 LGLHQ--NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDN 204 (745)
Q Consensus 127 ~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~ 204 (745)
|++.. ...+|..+++|+||+|+|||||||++||+|+ +..+++|..+.....|.
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-------------------------~~~g~~~~~~~~~~~d~ 60 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-------------------------VVGGASFVAGEAYNTDG 60 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-------------------------EEEEEECSTTCCTTCCS
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-------------------------CCCCccccCCCCCCCCC
Confidence 44433 4458999999999999999999999999994 23456666554556788
Q ss_pred CCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCCC
Q 042259 205 DGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGVDVLSISLGSPSL 283 (745)
Q Consensus 205 ~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~~ 283 (745)
.||||||||||+|... ..+ +.||||+|+|+.+|+++ ..+ +..++++++|+|+++++++|||||||....
T Consensus 61 ~gHGT~vAgiia~~~~--------~~g-~~GvAp~a~l~~~~v~~-~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~ 130 (274)
T 1r0r_E 61 NGHGTHVAGTVAALDN--------TTG-VLGVAPSVSLYAVKVLN-SSGSGSYSGIVSGIEWATTNGMDVINMSLGGASG 130 (274)
T ss_dssp SSHHHHHHHHHHCCSS--------SSB-CCCSSTTSEEEEEECSC-TTSEECHHHHHHHHHHHHHTTCSEEEECEEBSSC
T ss_pred CCCHHHHHHHHHccCC--------CCc-eEEECCCCEEEEEEEEC-CCCCccHHHHHHHHHHHHHcCCCEEEeCCCCCCC
Confidence 9999999999998731 111 47999999999999998 555 778899999999999999999999998642
Q ss_pred CChhhHHHHHHHHHhcCCcEEEEccCCCCCCC----CCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCC
Q 042259 284 PFFADAMATAAFTASQKGILVSCSAGNSGPNS----STLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKD 359 (745)
Q Consensus 284 ~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (745)
...+..++.++.++|+++|+||||+|... ..+|+..+++|+||+.+
T Consensus 131 ---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~--------------------------- 180 (274)
T 1r0r_E 131 ---STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD--------------------------- 180 (274)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEEC---------------------------
T ss_pred ---cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEec---------------------------
Confidence 34566666788899999999999999763 45677889999999952
Q ss_pred CCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccc
Q 042259 360 FPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVL 439 (745)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ 439 (745)
T Consensus 181 -------------------------------------------------------------------------------- 180 (274)
T 1r0r_E 181 -------------------------------------------------------------------------------- 180 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccC
Q 042259 440 PAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENI 519 (745)
Q Consensus 440 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~ 519 (745)
..+.++.||++||.+ ||+|||.+|+++++.
T Consensus 181 -------------------------------------~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~----- 210 (274)
T 1r0r_E 181 -------------------------------------SNSNRASFSSVGAEL--------EVMAPGAGVYSTYPT----- 210 (274)
T ss_dssp -------------------------------------TTSCBCTTCCCSTTE--------EEEEECSSEEEEETT-----
T ss_pred -------------------------------------CCCCcCccCCCCCCc--------eEEeCCCCeEeecCC-----
Confidence 112678999999854 999999999999987
Q ss_pred CCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCC
Q 042259 520 TNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKA 599 (745)
Q Consensus 520 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A 599 (745)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++. ++..||||+||+++|
T Consensus 211 ----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~~~~~~A 272 (274)
T 1r0r_E 211 ----NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG--------------SSFYYGKGLINVEAA 272 (274)
T ss_dssp ----TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--------------CHHHHTTCBCCHHHH
T ss_pred ----CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--------------CCCCcccCccCHHHH
Confidence 78999999999999999999999999999999999999999999762 356899999999999
Q ss_pred CC
Q 042259 600 ND 601 (745)
Q Consensus 600 ~~ 601 (745)
++
T Consensus 273 ~~ 274 (274)
T 1r0r_E 273 AQ 274 (274)
T ss_dssp TC
T ss_pred hC
Confidence 85
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=4.4e-52 Score=435.43 Aligned_cols=265 Identities=30% Similarity=0.437 Sum_probs=216.9
Q ss_pred ccCccC--CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCC
Q 042259 126 FLGLHQ--NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPID 203 (745)
Q Consensus 126 ~~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d 203 (745)
.|++.. ...+|+.+..|+||+|+|||||||++||+|.++ ++..++|.++..++.|
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~-----------------------~~~~~~~~~~~~~~~d 68 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK-----------------------VIKGYDFVDNDYDPMD 68 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT-----------------------EEEEEETTTTBSCCCC
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC-----------------------cccceeccCCCCCCCC
Confidence 355544 356899988888999999999999999999853 5567788766566788
Q ss_pred CCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCC
Q 042259 204 NDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGVDVLSISLGSPS 282 (745)
Q Consensus 204 ~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~ 282 (745)
..+|||||||||+|...+. .+ +.||||+|+|+.+|+++ ..+ +..+++++||+|+++++++|||||||...
T Consensus 69 ~~gHGT~vAgiia~~~~~~-------~g-~~GvAp~a~l~~~kv~~-~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~ 139 (280)
T 1dbi_A 69 LNNHGTHVAGIAAAETNNA-------TG-IAGMAPNTRILAVRALD-RNGSGTLSDIADAIIYAADSGAEVINLSLGCDC 139 (280)
T ss_dssp SSSHHHHHHHHHHCCCSSS-------SS-CCCSSSSCEEEEEECCC-TTSCCCHHHHHHHHHHHHHTTCSEEEECCSSCC
T ss_pred CCCcHHHHHHHHhCcCCCC-------Cc-ceEeCCCCEEEEEEEEC-CCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCC
Confidence 9999999999999875322 11 47999999999999998 544 78889999999999999999999999863
Q ss_pred CCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCC
Q 042259 283 LPFFADAMATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPS 362 (745)
Q Consensus 283 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (745)
. ...+..++..+.++|+++|+||||+|.....+++..+++|+|||++.
T Consensus 140 ~---~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----------------------------- 187 (280)
T 1dbi_A 140 H---TTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ----------------------------- 187 (280)
T ss_dssp C---CHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-----------------------------
T ss_pred C---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-----------------------------
Confidence 2 34556666688899999999999999887788889999999999521
Q ss_pred CceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEE
Q 042259 363 KQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAV 442 (745)
Q Consensus 363 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~ 442 (745)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCc
Q 042259 443 YVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNT 522 (745)
Q Consensus 443 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~ 522 (745)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 188 -----------------------------------~~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~-------- 216 (280)
T 1dbi_A 188 -----------------------------------YDRLASFSNYGTWV--------DVVAPGVDIVSTITG-------- 216 (280)
T ss_dssp -----------------------------------TSCBCTTBCCSTTC--------CEEEECSSEEEEETT--------
T ss_pred -----------------------------------CCCcCCCCCCCCCc--------eEEEecCCeEeecCC--------
Confidence 12678999999865 999999999999987
Q ss_pred ccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCC
Q 042259 523 KSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKAND 601 (745)
Q Consensus 523 ~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 601 (745)
+.|..++|||||||||||++|||++ |++++.+||++|++||+++... ...||||+||+.+|++
T Consensus 217 -~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~-------------~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 217 -NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT-------------GTYFKYGRINSYNAVT 279 (280)
T ss_dssp -TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB-------------TTTBSSEECCHHHHHT
T ss_pred -CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC-------------CCcccCCEECHHHHhc
Confidence 7899999999999999999999987 8999999999999999987422 2479999999999986
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=8.2e-52 Score=430.55 Aligned_cols=261 Identities=34% Similarity=0.530 Sum_probs=222.4
Q ss_pred cCccC--CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCC
Q 042259 127 LGLHQ--NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDN 204 (745)
Q Consensus 127 ~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~ 204 (745)
|++.. .+.+|..+++|+||+|+|||||| .+||+|+ +...++|..+...+.|.
T Consensus 6 W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-------------------------~~~~~~~~~~~~~~~d~ 59 (269)
T 1gci_A 6 WGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-------------------------IRGGASFVPGEPSTQDG 59 (269)
T ss_dssp HHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-------------------------EEEEEECSTTCCSCSCS
T ss_pred cChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-------------------------ccCCcccCCCCCCCCCC
Confidence 44443 35589999999999999999999 8999995 23456676654556789
Q ss_pred CCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCCC
Q 042259 205 DGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGVDVLSISLGSPSL 283 (745)
Q Consensus 205 ~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~~ 283 (745)
.||||||||||+|... ..+ +.||||+|+|+.+|+++ ..+ +..+++++||+|+++++++|||||||....
T Consensus 60 ~gHGT~vAgiia~~~~--------~~~-~~GvAp~a~l~~~~v~~-~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~~~ 129 (269)
T 1gci_A 60 NGHGTHVAGTIAALNN--------SIG-VLGVAPSAELYAVKVLG-ASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPSP 129 (269)
T ss_dssp SSHHHHHHHHHHCCCS--------SSB-CCCSSTTCEEEEEECBC-TTSCBCHHHHHHHHHHHHHTTCSEEEECCCBSSC
T ss_pred CCChHHHHHHHhcCcC--------CCC-cEEeCCCCEEEEEEeEC-CCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCCC
Confidence 9999999999998731 111 47999999999999998 544 788899999999999999999999998642
Q ss_pred CChhhHHHHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCC
Q 042259 284 PFFADAMATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSK 363 (745)
Q Consensus 284 ~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (745)
...+..++.++.++|+++|+||||+|.....+|+..+++|+||+++.
T Consensus 130 ---~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------------ 176 (269)
T 1gci_A 130 ---SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------------------------ 176 (269)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT------------------------------
T ss_pred ---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC------------------------------
Confidence 24566666688899999999999999988888999999999999521
Q ss_pred ceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEE
Q 042259 364 QLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVY 443 (745)
Q Consensus 364 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~ 443 (745)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcc
Q 042259 444 VSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTK 523 (745)
Q Consensus 444 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~ 523 (745)
.+.+++||++||.+ ||+|||++|+++++.
T Consensus 177 ----------------------------------~~~~~~~S~~G~~~--------di~APG~~i~s~~~~--------- 205 (269)
T 1gci_A 177 ----------------------------------NNNRASFSQYGAGL--------DIVAPGVNVQSTYPG--------- 205 (269)
T ss_dssp ----------------------------------TSCBCTTCCCSTTE--------EEEEECSSEEEEETT---------
T ss_pred ----------------------------------CCCCCCCCCCCCCc--------ceEecCCCeEeecCC---------
Confidence 12678999999875 999999999999987
Q ss_pred cceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCC
Q 042259 524 STFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKAND 601 (745)
Q Consensus 524 ~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 601 (745)
+.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. ++..||||+||+++|++
T Consensus 206 ~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 206 STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS--------------CHHHHTTCBCCHHHHTC
T ss_pred CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC--------------CCCCcccCccCHHHHcC
Confidence 78999999999999999999999999999999999999999999762 35689999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2e-51 Score=430.68 Aligned_cols=263 Identities=33% Similarity=0.526 Sum_probs=220.2
Q ss_pred cCccC--CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCC-CCC
Q 042259 127 LGLHQ--NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEP-PID 203 (745)
Q Consensus 127 ~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~-~~d 203 (745)
|++.. ...+|..+++|+||+|+|||||||++||+|+ +..+++|..+... ..|
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-------------------------~~~g~~~~~~~~~~~~d 60 (281)
T 1to2_E 6 YGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLK-------------------------VAGGASMVPSETNPFQD 60 (281)
T ss_dssp HHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-------------------------EEEEEECCTTCCCTTCC
T ss_pred cchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc-------------------------CcCCccccCCCCCCCCC
Confidence 55443 3458999999999999999999999999995 2234555543333 368
Q ss_pred CCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCC
Q 042259 204 NDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGVDVLSISLGSPS 282 (745)
Q Consensus 204 ~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~ 282 (745)
..||||||||||+|... ..+ +.||||+|+|+.+|++. ..+ +..++++++|+|+++++++|||||||...
T Consensus 61 ~~gHGT~vAgiia~~~~--------~~g-~~GvAp~a~l~~~kv~~-~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~ 130 (281)
T 1to2_E 61 NNSHGTHVAGTVAALNN--------SIG-VLGVAPSASLYAVKVLG-ADGSGQYSWIINGIEWAIANNMDVINMSLGGPS 130 (281)
T ss_dssp SSSHHHHHHHHHHCCSS--------SSS-BCCSSTTSEEEEEECSC-TTSEECHHHHHHHHHHHHHTTCSEEEECEEBSC
T ss_pred CCCcHHHHHHHHhccCC--------CCc-ceeeCCCCEEEEEEEeC-CCCCccHHHHHHHHHHHHHCCCcEEEECCcCCC
Confidence 89999999999998731 112 47999999999999998 555 77889999999999999999999999864
Q ss_pred CCChhhHHHHHHHHHhcCCcEEEEccCCCCCCC----CCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCC
Q 042259 283 LPFFADAMATAAFTASQKGILVSCSAGNSGPNS----STLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPK 358 (745)
Q Consensus 283 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (745)
. ...+..++.++.++|+++|+||||+|... ..+|+..+++|+||+++
T Consensus 131 ~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~-------------------------- 181 (281)
T 1to2_E 131 G---SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD-------------------------- 181 (281)
T ss_dssp C---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC--------------------------
T ss_pred C---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec--------------------------
Confidence 2 34566666788899999999999999763 45677889999999842
Q ss_pred CCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCcc
Q 042259 359 DFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHV 438 (745)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~ 438 (745)
T Consensus 182 -------------------------------------------------------------------------------- 181 (281)
T 1to2_E 182 -------------------------------------------------------------------------------- 181 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCcc
Q 042259 439 LPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEEN 518 (745)
Q Consensus 439 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~ 518 (745)
..+.++.||++||.+ ||+|||.+|+++++.
T Consensus 182 --------------------------------------~~~~~~~fS~~G~~~--------di~APG~~i~s~~~~---- 211 (281)
T 1to2_E 182 --------------------------------------SSNQRASFSSVGPEL--------DVMAPGVSIQSTLPG---- 211 (281)
T ss_dssp --------------------------------------TTSCBCTTCCCSTTC--------CEEEECSSEEEEETT----
T ss_pred --------------------------------------CCCCcCCcCCCCCCc--------eEEecCCCeEeecCC----
Confidence 112678999999965 999999999999987
Q ss_pred CCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccC
Q 042259 519 ITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSK 598 (745)
Q Consensus 519 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~ 598 (745)
+.|..++|||||||+|||++|||+|++|+|++.+||++|++||+++. +++.||||+||+.+
T Consensus 212 -----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~v~~~~ 272 (281)
T 1to2_E 212 -----NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG--------------DSFYYGKGLINVQA 272 (281)
T ss_dssp -----TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------------CHHHHTTCBCCHHH
T ss_pred -----CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC--------------CCCCcccceecHHH
Confidence 78999999999999999999999999999999999999999999762 35689999999999
Q ss_pred CCCC
Q 042259 599 ANDP 602 (745)
Q Consensus 599 A~~~ 602 (745)
|+++
T Consensus 273 a~~~ 276 (281)
T 1to2_E 273 AAQH 276 (281)
T ss_dssp HTSS
T ss_pred Hhhh
Confidence 9985
No 14
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=5.3e-53 Score=457.84 Aligned_cols=292 Identities=22% Similarity=0.245 Sum_probs=197.5
Q ss_pred CCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCC---cccCcc-----------eeeeeeCCCCCC
Q 042259 134 GFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEG---ANCNNK-----------IIGARNFLNKSE 199 (745)
Q Consensus 134 ~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~---~~~n~k-----------i~~~~~~~~~~~ 199 (745)
++|+.+..|+||+|||||||||++||+|.+....+....|+..++... ...+.. ......+..+..
T Consensus 22 ~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (357)
T 4h6x_A 22 DLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVIPDTK 101 (357)
T ss_dssp HHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHCTTTH
T ss_pred HHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccccCCCC
Confidence 489999889999999999999999999998777777778877665432 000000 000111111112
Q ss_pred CCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-----CCHHHHHHHHHHHHhCCCcEE
Q 042259 200 PPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-----CPESIVNAAIDAAVEEGVDVL 274 (745)
Q Consensus 200 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-----~~~~~i~~ai~~a~~~g~dVI 274 (745)
++.|.+||||||||||+|+..+ .+.||||+|+|+.+|++....+ ....+++++|+|++++|++||
T Consensus 102 ~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~Vi 171 (357)
T 4h6x_A 102 DRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANII 171 (357)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSEE
T ss_pred CCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCEE
Confidence 3446779999999999987421 2479999999999999762211 345578999999999999999
Q ss_pred EEccCCCC-CCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeeeeee
Q 042259 275 SISLGSPS-LPFFADAMATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGET 353 (745)
Q Consensus 275 n~S~G~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~ 353 (745)
|||||... .....+.+..++.++.++|+++|+||||+|.....+|+..+++|+|||++
T Consensus 172 n~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~--------------------- 230 (357)
T 4h6x_A 172 HCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAK--------------------- 230 (357)
T ss_dssp EEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEEC---------------------
T ss_pred eeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEec---------------------
Confidence 99999764 33445667777778999999999999999998888899999999999952
Q ss_pred ccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCcccc
Q 042259 354 IFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTV 433 (745)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~ 433 (745)
T Consensus 231 -------------------------------------------------------------------------------- 230 (357)
T 4h6x_A 231 -------------------------------------------------------------------------------- 230 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccC
Q 042259 434 ADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWP 513 (745)
Q Consensus 434 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~ 513 (745)
..+.+++|||||+.. .||||+|||++|+++++
T Consensus 231 -------------------------------------------~~~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~ 262 (357)
T 4h6x_A 231 -------------------------------------------VDGTPCHFSNWGGNN-----TKEGILAPGEEILGAQP 262 (357)
T ss_dssp -------------------------------------------TTSSBCTTCC---CT-----TTTEEEEECSSEEECCT
T ss_pred -------------------------------------------cCCcccccccCCCCC-----CccceeecCCCeEeccC
Confidence 123678999999764 58999999999999988
Q ss_pred CCCccCCCcccceeeeccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCccc
Q 042259 514 FSEENITNTKSTFTMISGTSMSCPHLSGIAALLKS----AHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAV 589 (745)
Q Consensus 514 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~ 589 (745)
.. +.|..++|||||||||||++|||++ ++|.|+++|||++|++||++++... ...+..|
T Consensus 263 ~~--------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~---------~~~~~~~ 325 (357)
T 4h6x_A 263 CT--------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV---------VEEPERC 325 (357)
T ss_dssp TC--------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-----------------------C
T ss_pred CC--------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCcccc
Confidence 63 4567899999999999999999995 4678999999999999999875321 2345689
Q ss_pred CCCCCCccCCCC
Q 042259 590 GAGHVNPSKAND 601 (745)
Q Consensus 590 G~G~vn~~~A~~ 601 (745)
|+|+||+.+|++
T Consensus 326 G~G~vn~~~A~~ 337 (357)
T 4h6x_A 326 LRGFVNIPGAMK 337 (357)
T ss_dssp TTCBCCHHHHHH
T ss_pred eeEEecHHHHHH
Confidence 999999999987
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=9.6e-51 Score=425.32 Aligned_cols=258 Identities=32% Similarity=0.508 Sum_probs=220.9
Q ss_pred CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCCCCChhhh
Q 042259 132 NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDNDGHGTHT 211 (745)
Q Consensus 132 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~~gHGThV 211 (745)
...+|+.. +|+||+|+|||||||++||+|.++ ++..++|.++...+.|..||||||
T Consensus 20 ~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~~~~~~~d~~gHGT~v 75 (279)
T 1thm_A 20 APQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK-----------------------VVGGWDFVDNDSTPQNGNGHGTHC 75 (279)
T ss_dssp HHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT-----------------------EEEEEETTTTBSCCCCSSSHHHHH
T ss_pred hHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC-----------------------ccccccccCCCCCCCCCCCcHHHH
Confidence 45588887 799999999999999999999853 556778877656678899999999
Q ss_pred hhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCCCCChhhHH
Q 042259 212 ASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGVDVLSISLGSPSLPFFADAM 290 (745)
Q Consensus 212 AGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~~~~~~~~~ 290 (745)
||||+|...++ .+ +.||||+|+|+.+|+++ ..+ +...++++||+||++++++|||||||.... .+.+
T Consensus 76 Agiia~~~~n~-------~g-~~GvAp~a~l~~~~v~~-~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~---~~~l 143 (279)
T 1thm_A 76 AGIAAAVTNNS-------TG-IAGTAPKASILAVRVLD-NSGSGTWTAVANGITYAADQGAKVISLSLGGTVG---NSGL 143 (279)
T ss_dssp HHHHHCCCSSS-------SS-CCCSSTTCEEEEEECSC-TTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSSC---CHHH
T ss_pred HHHHhCccCCC-------Cc-cEEeCCCCEEEEEEeeC-CCCCccHHHHHHHHHHHHHCCCCEEEEecCCCCC---CHHH
Confidence 99999975332 12 47999999999999998 544 788899999999999999999999998632 3456
Q ss_pred HHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeEec
Q 042259 291 ATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLVYP 370 (745)
Q Consensus 291 ~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (745)
..++.++.++|+++|+||||+|.....+++..+++|+||+++.
T Consensus 144 ~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------------------- 186 (279)
T 1thm_A 144 QQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------------------------------- 186 (279)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-------------------------------------
T ss_pred HHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-------------------------------------
Confidence 6666788899999999999999988888999999999999521
Q ss_pred CCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHhHH
Q 042259 371 GVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAAGE 450 (745)
Q Consensus 371 ~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~ 450 (745)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceeeec
Q 042259 451 RIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTMIS 530 (745)
Q Consensus 451 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~s 530 (745)
.+.++.||++||.+ ||+|||++|+++++. +.|..++
T Consensus 187 ---------------------------~~~~~~fS~~G~~~--------dv~APG~~i~s~~~~---------~~~~~~s 222 (279)
T 1thm_A 187 ---------------------------NDNKSSFSTYGSWV--------DVAAPGSSIYSTYPT---------STYASLS 222 (279)
T ss_dssp ---------------------------TSCBCTTCCCCTTC--------CEEEECSSEEEEETT---------TEEEEEC
T ss_pred ---------------------------CCCcCCcCCCCCce--------EEEEcCCCeEEEeCC---------CCEEEcc
Confidence 12678999999865 999999999999987 7899999
Q ss_pred cccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCC
Q 042259 531 GTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKAND 601 (745)
Q Consensus 531 GTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 601 (745)
|||||||||||++||| ++|.+++++||++|++||+++...+ ..||+|+||+.+|++
T Consensus 223 GTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~-------------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 223 GTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG-------------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp SHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT-------------TTBSSEECCHHHHHH
T ss_pred cHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC-------------ccccCCeeCHHHHhc
Confidence 9999999999999999 5799999999999999999875331 469999999999875
No 16
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3e-50 Score=429.10 Aligned_cols=284 Identities=30% Similarity=0.430 Sum_probs=226.4
Q ss_pred ccCccC--CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCC----C
Q 042259 126 FLGLHQ--NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKS----E 199 (745)
Q Consensus 126 ~~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~----~ 199 (745)
.|++.. ...+|..+++|+||+|+|||||||++||+|.++ +...++|.... .
T Consensus 7 ~W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~-----------------------~~~~~~~~~~~~~~~~ 63 (310)
T 2ixt_A 7 PWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN-----------------------VEQCKDFTGATTPINN 63 (310)
T ss_dssp CHHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT-----------------------EEEEEESSSSSSCEET
T ss_pred CCchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc-----------------------ccccccccCCCCCCCC
Confidence 355543 577999999999999999999999999999853 44456665431 3
Q ss_pred CCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCC-----cE
Q 042259 200 PPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGV-----DV 273 (745)
Q Consensus 200 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~-----dV 273 (745)
...|..||||||||||+|....+ ...+.||||+|+|+.+|++. +.+ +..++++++|+|++++++ +|
T Consensus 64 ~~~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~-~~g~~~~~~~~~ai~~a~~~~~~~~~~~V 135 (310)
T 2ixt_A 64 SCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLL-DSGSGYSDDIAAAIRHAADQATATGTKTI 135 (310)
T ss_dssp CCCCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSC-TTSCCCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEc-CCCCCcHHHHHHHHHHHHHhhhccCCCeE
Confidence 35688999999999999874211 11247999999999999998 554 788899999999999888 99
Q ss_pred EEEccCCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCC--CCCcccCCCceEEEeecccccceEEEEEeCCCeeeee
Q 042259 274 LSISLGSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPN--SSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDG 351 (745)
Q Consensus 274 In~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~ 351 (745)
||||||.... ...+..++.++.++|+++|+||||+|.. ...+++..+++|+||+++...
T Consensus 136 in~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~---------------- 196 (310)
T 2ixt_A 136 ISMSLGSSAN---NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ---------------- 196 (310)
T ss_dssp EEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE----------------
T ss_pred EEEcCCCCCC---CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc----------------
Confidence 9999998642 3455666668889999999999999976 456778889999999953100
Q ss_pred eeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCcc
Q 042259 352 ETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYG 431 (745)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 431 (745)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCC--ceecccCCCCCCCC----CCCccCceEeCC
Q 042259 432 TVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAP--EVAVFSSRGPNTAS----PGILKPDIIGPG 505 (745)
Q Consensus 432 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~GP~~~~----~g~~KPDi~APG 505 (745)
..+ .++.||++||.... .++.||||+|||
T Consensus 197 ---------------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG 231 (310)
T 2ixt_A 197 ---------------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPG 231 (310)
T ss_dssp ---------------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEEC
T ss_pred ---------------------------------------------cCCCeeeccccCCCCccCCccccccCCCeeEECCC
Confidence 001 57889999995421 123599999999
Q ss_pred ccEEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCC
Q 042259 506 VSILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPAD 585 (745)
Q Consensus 506 ~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~ 585 (745)
++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||++++..+. ....+..
T Consensus 232 ~~i~s~~~~---------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~----~~a~~g~ 298 (310)
T 2ixt_A 232 SSVYSTWYN---------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG----YGAAIGD 298 (310)
T ss_dssp SSEEEECTT---------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS----TTCCSSS
T ss_pred CCEeeecCC---------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC----cccccCC
Confidence 999999887 789999999999999999999999999999999999999999998764321 1123567
Q ss_pred CcccCCCCCCcc
Q 042259 586 LFAVGAGHVNPS 597 (745)
Q Consensus 586 ~~~~G~G~vn~~ 597 (745)
+..||||++|++
T Consensus 299 d~~~G~G~~~vq 310 (310)
T 2ixt_A 299 DYASGFGFARVQ 310 (310)
T ss_dssp BTTTBTCBCCC-
T ss_pred ccccccceeecC
Confidence 789999999963
No 17
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.7e-51 Score=440.33 Aligned_cols=266 Identities=30% Similarity=0.468 Sum_probs=217.1
Q ss_pred ccCccC--CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCC----C
Q 042259 126 FLGLHQ--NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKS----E 199 (745)
Q Consensus 126 ~~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~----~ 199 (745)
.|++.. ...+|+.+++|+||+|+|||||||++||+|.++ +..+++|..++ .
T Consensus 22 ~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~-----------------------~~~~~~~~~~~~~~~~ 78 (327)
T 2x8j_A 22 PMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAER-----------------------IIGGVNLTTDYGGDET 78 (327)
T ss_dssp CHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG-----------------------EEEEEECSSGGGGCTT
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc-----------------------ccCCccccCCCCCCCC
Confidence 355543 456899999999999999999999999999853 44556665431 2
Q ss_pred CCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHh------CCCc
Q 042259 200 PPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVE------EGVD 272 (745)
Q Consensus 200 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~------~g~d 272 (745)
...|..||||||||||+|... ..+ +.||||+|+|+.+|+++ ..+ +..+++++||+||++ .+++
T Consensus 79 ~~~d~~gHGT~VAgiia~~~~--------~~g-~~GvAp~a~l~~~kv~~-~~g~~~~~~i~~ai~~a~~~~~~~~~~~~ 148 (327)
T 2x8j_A 79 NFSDNNGHGTHVAGTVAAAET--------GSG-VVGVAPKADLFIIKALS-GDGSGEMGWIAKAIRYAVDWRGPKGEQMR 148 (327)
T ss_dssp CCCCSSSHHHHHHHHHHCCCC--------SSB-CCCSSTTCEEEEEECSC-TTSEECHHHHHHHHHHHHHCCCTTSCCCS
T ss_pred CCCCCCCchHHHHHHHhccCC--------CCC-cEeeCCCCEEEEEEeEC-CCCCcCHHHHHHHHHHHHhhcccccCCce
Confidence 356889999999999998731 112 47999999999999998 555 778899999999999 8999
Q ss_pred EEEEccCCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCCC-----CCcccCCCceEEEeecccccceEEEEEeCCCe
Q 042259 273 VLSISLGSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPNS-----STLANEAPWMLTVGASTIDRSIVALTQLGNQE 347 (745)
Q Consensus 273 VIn~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~ 347 (745)
|||||||.... ...+..++.++.++|+++|+||||+|... ..+|+..+++|+|||++.
T Consensus 149 Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~-------------- 211 (327)
T 2x8j_A 149 IITMSLGGPTD---SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF-------------- 211 (327)
T ss_dssp EEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT--------------
T ss_pred EEEECCCcCCC---CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC--------------
Confidence 99999998642 34566666688899999999999999763 456788899999999531
Q ss_pred eeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCC
Q 042259 348 TYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDEL 427 (745)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 427 (745)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCcc
Q 042259 428 FDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVS 507 (745)
Q Consensus 428 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~ 507 (745)
.+.++.||++||.+ ||+|||++
T Consensus 212 --------------------------------------------------~~~~~~fS~~G~~~--------di~APG~~ 233 (327)
T 2x8j_A 212 --------------------------------------------------DLRLSDFTNTNEEI--------DIVAPGVG 233 (327)
T ss_dssp --------------------------------------------------TCCBSCC---CCCC--------SEEEECSS
T ss_pred --------------------------------------------------CCCCCCccCCCCCc--------eEecCcCc
Confidence 12678999999854 99999999
Q ss_pred EEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhh-----CCCCCHHHHHHHHhcccccccCCCCcccCCCCC
Q 042259 508 ILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSA-----HPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLL 582 (745)
Q Consensus 508 I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~ 582 (745)
|+++++. +.|..++|||||||+|||++|||+|+ +|.+++.+||++|++||+++.
T Consensus 234 i~s~~~~---------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g------------ 292 (327)
T 2x8j_A 234 IKSTYLD---------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG------------ 292 (327)
T ss_dssp EEEECST---------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS------------
T ss_pred eEeecCC---------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC------------
Confidence 9999987 78999999999999999999999999 999999999999999999763
Q ss_pred CCCCcccCCCCCCccCCCC
Q 042259 583 PADLFAVGAGHVNPSKAND 601 (745)
Q Consensus 583 ~~~~~~~G~G~vn~~~A~~ 601 (745)
.++..||+|+||+.+|++
T Consensus 293 -~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 293 -FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp -SCHHHHTTCEECTTHHHH
T ss_pred -CCCCceeeeEECHHHHHH
Confidence 245689999999999988
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=5.4e-51 Score=428.75 Aligned_cols=263 Identities=26% Similarity=0.318 Sum_probs=210.7
Q ss_pred CCCC-CccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCC--CCCCCCChhhhhhhh
Q 042259 139 SNLG-KGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEP--PIDNDGHGTHTASTA 215 (745)
Q Consensus 139 ~~~G-~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~--~~d~~gHGThVAGii 215 (745)
.++| +||+|||||||||++||+|.++ .+..+++...... ..|.+||||||||||
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~-----------------------~~~~~~~~~~~~~~~d~~~~gHGT~VAGii 59 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA-----------------------DLTVLPTLAPTAARSDGFMSAHGTHVASII 59 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC-----------------------EEEECCCSSCCCCCTTCHHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC-----------------------eeecCcCCCCCCCCCCCCCCCcccceeehh
Confidence 3578 7999999999999999999864 1222233322122 223568999999999
Q ss_pred cccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCC-CCChhhHHHHH
Q 042259 216 AGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGVDVLSISLGSPS-LPFFADAMATA 293 (745)
Q Consensus 216 ag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~-~~~~~~~~~~a 293 (745)
+|+..+ .+.||||+|+|+.+|++....+ ....+++++|+||++++++|||||||... .......+..+
T Consensus 60 ag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~a 129 (282)
T 3zxy_A 60 FGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENA 129 (282)
T ss_dssp HCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHH
T ss_pred hccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccHHHHHH
Confidence 987422 2479999999999999863333 67788999999999999999999999753 22334556667
Q ss_pred HHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeEecCCC
Q 042259 294 AFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLVYPGVK 373 (745)
Q Consensus 294 ~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (745)
+..+.++|+++|+||||+|.....++...+++|+|||.+
T Consensus 130 i~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~----------------------------------------- 168 (282)
T 3zxy_A 130 VSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMD----------------------------------------- 168 (282)
T ss_dssp HHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEEC-----------------------------------------
T ss_pred HHHHhhcCceEEEecccCCCccccCccccceeEEEEEEc-----------------------------------------
Confidence 778889999999999999998888889999999999952
Q ss_pred CCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHhHHHHH
Q 042259 374 NSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAAGERIK 453 (745)
Q Consensus 374 ~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~ 453 (745)
T Consensus 169 -------------------------------------------------------------------------------- 168 (282)
T 3zxy_A 169 -------------------------------------------------------------------------------- 168 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceeeecccc
Q 042259 454 AYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTMISGTS 533 (745)
Q Consensus 454 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTS 533 (745)
..+.++.||+||+. ..||||+|||.+|+++++. +.|..++|||
T Consensus 169 -----------------------~~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~---------~~~~~~sGTS 211 (282)
T 3zxy_A 169 -----------------------DHGHPLDFSNWGST-----YEQQGILAPGEDILGAKPG---------GGTERLSGTA 211 (282)
T ss_dssp -----------------------TTSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT---------SCEEEECSHH
T ss_pred -----------------------CCCccccccCCCCC-----ccccceeccCcceeeecCC---------CceeecCCCc
Confidence 12267889999975 4689999999999999988 7899999999
Q ss_pred chhHHHHHHHHHHHhhC----CCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCC
Q 042259 534 MSCPHLSGIAALLKSAH----PDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKAND 601 (745)
Q Consensus 534 mAaP~VAG~aALl~q~~----p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 601 (745)
||||||||++|||++++ |.++|++||++|++||++++.. .+.....||+|+||+.+|++
T Consensus 212 ~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~---------~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 212 FATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD---------APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------------CGGGTTCBCCHHHHHH
T ss_pred ccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC---------CCCccCceeeeEeCHHHHHH
Confidence 99999999999999874 7899999999999999876432 23345689999999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.4e-50 Score=430.97 Aligned_cols=265 Identities=28% Similarity=0.438 Sum_probs=219.8
Q ss_pred ccCccC--CCCCccCCCCCC--ccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCC---
Q 042259 126 FLGLHQ--NSGFWKDSNLGK--GVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKS--- 198 (745)
Q Consensus 126 ~~g~~~--~~~~~~~~~~G~--gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~--- 198 (745)
.|++.. ...+|+.+ +|+ ||+|+|||||||++||+|.++ +...++|..+.
T Consensus 9 ~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~-----------------------~~~~~~~~~~~~~~ 64 (320)
T 2z30_A 9 PWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------IAWCVSTLRGKVST 64 (320)
T ss_dssp CHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG-----------------------EEEEEECGGGCCBC
T ss_pred CCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc-----------------------cccCccccCCccCC
Confidence 355543 56699998 999 999999999999999999853 33444554331
Q ss_pred --CCCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhC------
Q 042259 199 --EPPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEE------ 269 (745)
Q Consensus 199 --~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~------ 269 (745)
.+..|..||||||||||+|... ..+ +.||||+|+|+.+|+++ ..+ +..++++++|+||+++
T Consensus 65 ~~~~~~d~~gHGT~vAgiia~~~n--------~~g-~~GvAp~a~l~~~~v~~-~~g~~~~~~i~~ai~~a~~~~~~~~~ 134 (320)
T 2z30_A 65 KLRDCADQNGHGTHVIGTIAALNN--------DIG-VVGVAPGVQIYSVRVLD-ARGSGSYSDIAIGIEQAILGPDGVAD 134 (320)
T ss_dssp CHHHHBCSSSHHHHHHHHHHCCSS--------SBS-CCCSSTTCEEEEEECSC-TTSEEEHHHHHHHHHHHHHTTTTCSC
T ss_pred CCCCCCCCCCCHHHHHHHHHcccC--------CCc-eEeeCCCCEEEEEEeeC-CCCCccHHHHHHHHHHHHhCcccccc
Confidence 1236789999999999998621 111 47999999999999998 555 7788999999999987
Q ss_pred --------------CCcEEEEccCCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeeccccc
Q 042259 270 --------------GVDVLSISLGSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDR 335 (745)
Q Consensus 270 --------------g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~ 335 (745)
+++|||||||.... ...+..++.++.++|+++|+||||+|.....+++..+++|+|||++.
T Consensus 135 ~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~-- 209 (320)
T 2z30_A 135 KDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS-- 209 (320)
T ss_dssp TTSSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT--
T ss_pred cccccccccccccCCceEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCC--
Confidence 99999999998642 24455566678899999999999999988888999999999999521
Q ss_pred ceEEEEEeCCCeeeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhc
Q 042259 336 SIVALTQLGNQETYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDA 415 (745)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~ 415 (745)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEecCCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCC
Q 042259 416 GGAAMILMNDELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPG 495 (745)
Q Consensus 416 Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g 495 (745)
.+.++.||++||
T Consensus 210 --------------------------------------------------------------~~~~~~~S~~g~------ 221 (320)
T 2z30_A 210 --------------------------------------------------------------NDNIASFSNRQP------ 221 (320)
T ss_dssp --------------------------------------------------------------TSCBCTTSCSSC------
T ss_pred --------------------------------------------------------------CCCcCcccCCCC------
Confidence 126789999996
Q ss_pred CccCceEeCCccEEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhC-------------CCCCHHHHHHHH
Q 042259 496 ILKPDIIGPGVSILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAH-------------PDWSPAAIKSAI 562 (745)
Q Consensus 496 ~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------------p~~s~~~ik~~L 562 (745)
+|+|||++|+++++. +.|..++|||||||||||++|||+|++ |++++.+||++|
T Consensus 222 ----~v~APG~~i~s~~~~---------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L 288 (320)
T 2z30_A 222 ----EVSAPGVDILSTYPD---------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGIL 288 (320)
T ss_dssp ----SEEEECSSEEEEETT---------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHH
T ss_pred ----CEEeCCCCeEEeccC---------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHH
Confidence 789999999999987 789999999999999999999999998 999999999999
Q ss_pred hcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCC
Q 042259 563 MTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKAND 601 (745)
Q Consensus 563 ~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 601 (745)
++||+++... ..+..||||+||+.+|++
T Consensus 289 ~~ta~~~~~~-----------g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 289 HITADDLGPT-----------GWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp HHHSBCCSSS-----------SSBTTTBTCBCCHHHHHH
T ss_pred HhhCccCCCC-----------CCCCCcCCceeCHHHHHH
Confidence 9999987432 345689999999999986
No 20
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=2e-50 Score=437.09 Aligned_cols=266 Identities=21% Similarity=0.149 Sum_probs=218.7
Q ss_pred CCCCccCCCCCC--ccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCC-----CCCCC
Q 042259 132 NSGFWKDSNLGK--GVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSE-----PPIDN 204 (745)
Q Consensus 132 ~~~~~~~~~~G~--gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~-----~~~d~ 204 (745)
...+|+. .+|+ ||+||||||||| +||+|.++ +...++|..+.. .+.|.
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~-----------------------~~~~~~~~~~~~~~~~~~~~d~ 86 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS-----------------------EFAKFSFTQDGSPFPVKKSEAL 86 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC-----------------------EEEEEECBTTCCSSCCSSSHHH
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC-----------------------cccCCcccCCCCCCCCCCCCCC
Confidence 4568988 8999 999999999999 99999853 445566654322 44567
Q ss_pred CCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHhC------CCcEEEEcc
Q 042259 205 DGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVEE------GVDVLSISL 278 (745)
Q Consensus 205 ~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~------g~dVIn~S~ 278 (745)
.||||||||||+|+. | +.||||+|+|+.+|+++ ..+.. ++++||+||+++ +++||||||
T Consensus 87 ~gHGT~vAgiia~~~-------g-----~~GvAp~a~l~~~~v~~-~~~~~--~~~~ai~~a~~~~~~~~~~~~Vin~S~ 151 (347)
T 2iy9_A 87 YIHGTAMASLIASRY-------G-----IYGVYPHALISSRRVIP-DGVQD--SWIRAIESIMSNVFLAPGEEKIINISG 151 (347)
T ss_dssp HHHHHHHHHHHHCSS-------S-----SCCSSTTCEEEEEECCS-SBCTT--HHHHHHHHHHTCTTSCTTEEEEEEESS
T ss_pred CCcHHHHHHHHhccc-------C-----CcccCCCCEEEEEEEec-CCCHH--HHHHHHHHHHhhhhcccCCceEEEecc
Confidence 899999999999871 1 37999999999999998 44433 999999999999 999999999
Q ss_pred CCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCC-------CCCcccCCC----------ceEEEeeccc--ccceEE
Q 042259 279 GSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPN-------SSTLANEAP----------WMLTVGASTI--DRSIVA 339 (745)
Q Consensus 279 G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p----------~vitVga~~~--~~~~~~ 339 (745)
|........+.+..++..+.++|+++|+||||+|.. ...+++..+ ++|+|||++. +...
T Consensus 152 G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~g~~-- 229 (347)
T 2iy9_A 152 GQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGET-- 229 (347)
T ss_dssp CBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCTTSC--
T ss_pred ccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCCCce--
Confidence 976544456677777888899999999999999985 456777888 9999999642 1100
Q ss_pred EEEeCCCeeeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceE
Q 042259 340 LTQLGNQETYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAA 419 (745)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g 419 (745)
T Consensus 230 -------------------------------------------------------------------------------- 229 (347)
T 2iy9_A 230 -------------------------------------------------------------------------------- 229 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccC
Q 042259 420 MILMNDELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKP 499 (745)
Q Consensus 420 ~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KP 499 (745)
....+.++.||++||+ ||
T Consensus 230 -------------------------------------------------------~~~~~~~~~fS~~G~~-------~~ 247 (347)
T 2iy9_A 230 -------------------------------------------------------PVLHGGGITGSRFGNN-------WV 247 (347)
T ss_dssp -------------------------------------------------------CCBCCCSSSCBCBCTT-------TC
T ss_pred -------------------------------------------------------ecccCCCCCCCCCCCC-------CC
Confidence 0001255799999995 67
Q ss_pred ceEeCCccEEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCC
Q 042259 500 DIIGPGVSILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNH 579 (745)
Q Consensus 500 Di~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 579 (745)
||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||+++...+
T Consensus 248 di~APG~~i~s~~~~---------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~------ 312 (347)
T 2iy9_A 248 DIAAPGQNITFLRPD---------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV------ 312 (347)
T ss_dssp SEEEECSSEEEECTT---------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT------
T ss_pred EEEeCCCCeEeecCC---------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC------
Confidence 999999999999987 78999999999999999999999999999999999999999999875431
Q ss_pred CCCCCCCcccCCCCCCccCCCCC
Q 042259 580 HLLPADLFAVGAGHVNPSKANDP 602 (745)
Q Consensus 580 ~~~~~~~~~~G~G~vn~~~A~~~ 602 (745)
...||+|+||+.+|++.
T Consensus 313 ------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 313 ------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp ------TTSGGGEECCHHHHHHH
T ss_pred ------CccccCCEecHHHHHHH
Confidence 25899999999999984
No 21
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=3.3e-50 Score=428.22 Aligned_cols=269 Identities=25% Similarity=0.334 Sum_probs=217.3
Q ss_pred CCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCC-CCCCCCCCChhhhh
Q 042259 134 GFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKS-EPPIDNDGHGTHTA 212 (745)
Q Consensus 134 ~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~-~~~~d~~gHGThVA 212 (745)
++|+....++||+|||||||||++||+|.++. +....++..+. ....|..|||||||
T Consensus 12 ~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~----------------------~~~~~~~~~~~~~~~~d~~gHGThVA 69 (306)
T 4h6w_A 12 KLWSETRGDPKICVAVLDGIVDQNHPCFIGAD----------------------LTRLPSLVSGEANANGSMSTHGTHVA 69 (306)
T ss_dssp HHHHHCSCCTTCEEEEESSCCCTTSGGGTTCE----------------------EEECC----------CCCCHHHHHHH
T ss_pred HHHhhhCCCCCCEEEEEcCCCCCCChhHcCCc----------------------ccCCCcccCCCCCCCCCCCCchHHHH
Confidence 49999877799999999999999999998642 22233333322 23446789999999
Q ss_pred hhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCC-CCChhhHH
Q 042259 213 STAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGVDVLSISLGSPS-LPFFADAM 290 (745)
Q Consensus 213 Giiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~-~~~~~~~~ 290 (745)
|||+|+... .+.||||+|+|+.+|++.+..+ .....++++|+||++++++|||+|||... .......+
T Consensus 70 Giiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~~~~~~~~~ 139 (306)
T 4h6w_A 70 SIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTDAGEADTWL 139 (306)
T ss_dssp HHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHH
T ss_pred HHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeeccccccccCCCccHHH
Confidence 999987421 2479999999999999873333 67888999999999999999999999643 23344556
Q ss_pred HHHHHHHhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeEec
Q 042259 291 ATAAFTASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLVYP 370 (745)
Q Consensus 291 ~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (745)
..++..+.++|+++|+||||+|.....+++..+++|+|||++.
T Consensus 140 ~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~------------------------------------- 182 (306)
T 4h6w_A 140 EKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD------------------------------------- 182 (306)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-------------------------------------
T ss_pred HHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-------------------------------------
Confidence 6777788999999999999999988888889999999999521
Q ss_pred CCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHhHH
Q 042259 371 GVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAAGE 450 (745)
Q Consensus 371 ~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~ 450 (745)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceeeec
Q 042259 451 RIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTMIS 530 (745)
Q Consensus 451 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~s 530 (745)
.+.+++||++|+. ..||||+|||++|+++++. +.|..++
T Consensus 183 ---------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~---------~~~~~~s 221 (306)
T 4h6w_A 183 ---------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDILGAKPN---------GGTIRLS 221 (306)
T ss_dssp ---------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSEEEECTT---------SCEEEEC
T ss_pred ---------------------------CCCccccccccCC-----cCcceeecCCcCcccccCC---------CceeccC
Confidence 1266789999965 4689999999999999988 7899999
Q ss_pred cccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCC
Q 042259 531 GTSMSCPHLSGIAALLKSA----HPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKAND 601 (745)
Q Consensus 531 GTSmAaP~VAG~aALl~q~----~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 601 (745)
|||||||||||++|||+++ +|.++|+|||++|++||+++...+ ......||+|+||+.+|++
T Consensus 222 GTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~---------~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 222 GTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD---------TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT---------CSCGGGGTTCBCCHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCCCCcceeecCHHHHHH
Confidence 9999999999999999864 699999999999999999875443 1234579999999999997
No 22
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.9e-48 Score=408.09 Aligned_cols=235 Identities=29% Similarity=0.421 Sum_probs=204.0
Q ss_pred CCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCCCCChhhhh
Q 042259 133 SGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDNDGHGTHTA 212 (745)
Q Consensus 133 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~~gHGThVA 212 (745)
..+|..+++|+||+|+|||||||++||+|.++ +...++|.++...+.|..|||||||
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~~~~~~~d~~gHGT~vA 75 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR-----------------------SVSGYDFVDNDADSSDCNGHGTHVA 75 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC-----------------------EEEEEETTTTBSCCCCSSSHHHHHH
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC-----------------------ccccccccCCCCCCCCCCCcHHHHH
Confidence 45899999999999999999999999999853 4556778766556788999999999
Q ss_pred hhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhC--CCcEEEEccCCCCCCChhhH
Q 042259 213 STAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEE--GVDVLSISLGSPSLPFFADA 289 (745)
Q Consensus 213 Giiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~--g~dVIn~S~G~~~~~~~~~~ 289 (745)
|||+|.. .||||+|+|+.+|+++ ..+ +..+++++||+|++++ +++|||||||.... ..
T Consensus 76 giia~~~--------------~GvAp~a~l~~~kv~~-~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~~~----~~ 136 (284)
T 1sh7_A 76 GTIGGSQ--------------YGVAKNVNIVGVRVLS-CSGSGTTSGVISGVDWVAQNASGPSVANMSLGGGQS----TA 136 (284)
T ss_dssp HHHHCTT--------------TCSSTTCEEEEEECBC-TTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBSCC----HH
T ss_pred HHHhccc--------------CCcCCCCEEEEEEeeC-CCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCCCC----HH
Confidence 9999873 5999999999999998 544 7888999999999974 79999999998743 45
Q ss_pred HHHHHHHHhcCCcEEEEccCCCCCCCC-CcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeE
Q 042259 290 MATAAFTASQKGILVSCSAGNSGPNSS-TLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLV 368 (745)
Q Consensus 290 ~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (745)
+..++.++.++|+++|+||||+|.... .+++..+++|+||+++.
T Consensus 137 ~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~----------------------------------- 181 (284)
T 1sh7_A 137 LDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS----------------------------------- 181 (284)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT-----------------------------------
T ss_pred HHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC-----------------------------------
Confidence 556666888999999999999997653 45788899999999521
Q ss_pred ecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHh
Q 042259 369 YPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAA 448 (745)
Q Consensus 369 ~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~ 448 (745)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceee
Q 042259 449 GERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTM 528 (745)
Q Consensus 449 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~ 528 (745)
.+.++.||++||.+ ||+|||++|+++++. +.|..
T Consensus 182 -----------------------------~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~---------~~~~~ 215 (284)
T 1sh7_A 182 -----------------------------SDSRSSFSNWGSCV--------DLFAPGSQIKSAWYD---------GGYKT 215 (284)
T ss_dssp -----------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTT---------SSEEE
T ss_pred -----------------------------CCCcCcccCCCCcc--------EEEeccCCeEEecCC---------CCEEE
Confidence 12678999999976 999999999999887 68999
Q ss_pred eccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhccccccc
Q 042259 529 ISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVN 570 (745)
Q Consensus 529 ~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 570 (745)
++|||||||||||++|||+|++|+|+++|||++|++||++..
T Consensus 216 ~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 216 ISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred ccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 999999999999999999999999999999999999998764
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=6.5e-49 Score=437.69 Aligned_cols=287 Identities=28% Similarity=0.359 Sum_probs=224.0
Q ss_pred CCcc-CCCCCCccEEEEecCCCCC------CCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCCCC
Q 042259 134 GFWK-DSNLGKGVIIGVLDMGITP------GHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDNDG 206 (745)
Q Consensus 134 ~~~~-~~~~G~gv~VaVIDtGid~------~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~~g 206 (745)
.+|. .+++|+||+|||||||||+ .||+|.++ +...++|.+. ..+.|..|
T Consensus 12 ~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~-----------------------i~~~~~~~~~-~~~~d~~g 67 (434)
T 1wmd_A 12 VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK-----------------------ITALYALGRT-NNANDTNG 67 (434)
T ss_dssp HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC-----------------------EEEEEETTTT-TCCCCSSS
T ss_pred hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC-----------------------EeeeccccCC-CCCCCCCC
Confidence 4887 7999999999999999999 79999753 5556677654 46778999
Q ss_pred ChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCC---CHHHHHHHHHHHHhCCCcEEEEccCCCCC
Q 042259 207 HGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGC---PESIVNAAIDAAVEEGVDVLSISLGSPSL 283 (745)
Q Consensus 207 HGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~---~~~~i~~ai~~a~~~g~dVIn~S~G~~~~ 283 (745)
|||||||||+|+.. + +.||||+|+|+.+|+++ ..+. ...++.++|++++++|++|||||||....
T Consensus 68 HGT~VAgiiag~g~----------~-~~GvAp~a~l~~~~v~~-~~g~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~ 135 (434)
T 1wmd_A 68 HGTHVAGSVLGNGS----------T-NKGMAPQANLVFQSIMD-SGGGLGGLPSNLQTLFSQAYSAGARIHTNSWGAAVN 135 (434)
T ss_dssp HHHHHHHHHHCCSS----------S-SCCSSTTSEEEEEECCC-TTSSCTTSCSSHHHHHHHHHHTTCSEEEECCCBCCT
T ss_pred cHHHHHHHHHcCCC----------C-ceeeCCCCEEEEEEeec-CCCccccccHHHHHHHHHHHhcCCeEEEecCCCCcC
Confidence 99999999998631 1 47999999999999998 5542 45679999999999999999999998642
Q ss_pred CChhhHHHHHHHHH-hcCCcEEEEccCCCCCCC--CCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCC
Q 042259 284 PFFADAMATAAFTA-SQKGILVSCSAGNSGPNS--STLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDF 360 (745)
Q Consensus 284 ~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~--~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (745)
..+ +....++.++ .++|+++|+||||+|... ...++.++++|+|||++..+..
T Consensus 136 ~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~----------------------- 191 (434)
T 1wmd_A 136 GAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPS----------------------- 191 (434)
T ss_dssp TCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGG-----------------------
T ss_pred CcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcc-----------------------
Confidence 211 2223333344 589999999999999864 4567889999999996422100
Q ss_pred CCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCcccc
Q 042259 361 PSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLP 440 (745)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p 440 (745)
.+.
T Consensus 192 ---------------------------------------~~~-------------------------------------- 194 (434)
T 1wmd_A 192 ---------------------------------------FGS-------------------------------------- 194 (434)
T ss_dssp ---------------------------------------GCG--------------------------------------
T ss_pred ---------------------------------------cCc--------------------------------------
Confidence 000
Q ss_pred EEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCcc--
Q 042259 441 AVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEEN-- 518 (745)
Q Consensus 441 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~-- 518 (745)
-....+.+++|||+||+. ++++||||+|||++|+++++.....
T Consensus 195 ---------------------------------~~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s~~~~~~~~~~ 239 (434)
T 1wmd_A 195 ---------------------------------YADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDSS 239 (434)
T ss_dssp ---------------------------------GGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTCCGGG
T ss_pred ---------------------------------ccCCCCccccccCCCCCC--CCCCCceEEcCCCCeEecCCCCCCCcc
Confidence 001234789999999998 7999999999999999998642100
Q ss_pred -CCCcccceeeeccccchhHHHHHHHHHHHhhCCCC-----CHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCC
Q 042259 519 -ITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDW-----SPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAG 592 (745)
Q Consensus 519 -~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~-----s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G 592 (745)
.....+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++.. .+++..||||
T Consensus 240 ~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-----------~~~~~~~G~G 308 (434)
T 1wmd_A 240 FWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-----------GYPNGNQGWG 308 (434)
T ss_dssp SSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS-----------CSSCTTTTTC
T ss_pred cccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC-----------CCCCccCCcC
Confidence 00113689999999999999999999999998865 899999999999987521 2466789999
Q ss_pred CCCccCCCCCC
Q 042259 593 HVNPSKANDPG 603 (745)
Q Consensus 593 ~vn~~~A~~~~ 603 (745)
++|+.+|++..
T Consensus 309 ~vd~~~a~~~~ 319 (434)
T 1wmd_A 309 RVTLDKSLNVA 319 (434)
T ss_dssp BCCHHHHHTCE
T ss_pred eEeHHHhcccc
Confidence 99999999754
No 24
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=7.8e-48 Score=458.57 Aligned_cols=405 Identities=21% Similarity=0.244 Sum_probs=266.5
Q ss_pred ccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCC---CCCCCCCChhhhhhhhccccc
Q 042259 144 GVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSE---PPIDNDGHGTHTASTAAGNFV 220 (745)
Q Consensus 144 gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~---~~~d~~gHGThVAGiiag~~~ 220 (745)
+|+|||||||+|.+|++..-- ..|+...+.+. + .+.+-+..++.++.. ...|++||||||||||||..
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l------~~Y~~~~dyg~-F-~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~- 284 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRI------GEYSRTHETRN-V-DDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNH- 284 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEE------ECTTTTCCCCE-E-SSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCC-
T ss_pred CEEEEEEeCCCCCCccccccc------ccccccccccc-c-ccccCCCCccCCCCCccccCCCCCCcHHHHHHHHhcCC-
Confidence 699999999998766654310 01111111000 0 112223333332211 12478899999999999985
Q ss_pred CCCcccCCCCcceeeeccCceEEeeecccCCCC--CCHHHHHHHHHHHHh-----CCCcEEEEccCCCCCCChhhHHHHH
Q 042259 221 NGANLFGQANGTAAGMAPLAHLAIYKVCETDLG--CPESIVNAAIDAAVE-----EGVDVLSISLGSPSLPFFADAMATA 293 (745)
Q Consensus 221 ~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g--~~~~~i~~ai~~a~~-----~g~dVIn~S~G~~~~~~~~~~~~~a 293 (745)
++ ..+.||||+|+|+.+|+++...+ .....++.+|.+|++ .|++|||||||........+.+..+
T Consensus 285 N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~~~~~l~~a 356 (1354)
T 3lxu_X 285 SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGEL 356 (1354)
T ss_dssp SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCCSCSSCCHHHHH
T ss_pred CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCCCCCccHHHHHH
Confidence 21 12479999999999999983223 256678888888777 7999999999987543334455666
Q ss_pred HHHHh-cCCcEEEEccCCCCCCCCC--ccc--CCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeE
Q 042259 294 AFTAS-QKGILVSCSAGNSGPNSST--LAN--EAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLV 368 (745)
Q Consensus 294 ~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~--~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (745)
+.++. ++|+++|+||||+|..... +++ .++++|+|||++.+......
T Consensus 357 I~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~---------------------------- 408 (1354)
T 3lxu_X 357 MNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAE---------------------------- 408 (1354)
T ss_dssp HHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----------------------------
T ss_pred HHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccc----------------------------
Confidence 66765 8999999999999986544 455 48999999996432210000
Q ss_pred ecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHh
Q 042259 369 YPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAA 448 (745)
Q Consensus 369 ~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~ 448 (745)
|.
T Consensus 409 ys------------------------------------------------------------------------------ 410 (1354)
T 3lxu_X 409 YA------------------------------------------------------------------------------ 410 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceee
Q 042259 449 GERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTM 528 (745)
Q Consensus 449 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~ 528 (745)
......+.+++|||+||+. ++++||||+|||++|+++..... +.|..
T Consensus 411 ------------------------~~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~-------~~y~~ 457 (1354)
T 3lxu_X 411 ------------------------MREKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM-------SKSQL 457 (1354)
T ss_dssp -------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC----------------------C
T ss_pred ------------------------cccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCC-------Cceec
Confidence 0001124789999999998 78999999999999999865422 67899
Q ss_pred eccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCccCCCCCCc
Q 042259 529 ISGTSMSCPHLSGIAALLKS----AHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNPSKANDPGL 604 (745)
Q Consensus 529 ~sGTSmAaP~VAG~aALl~q----~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~l 604 (745)
++|||||||||||++|||++ .+|+|++.+||++|++||+++.. .+++.||||+||+.+|++..+
T Consensus 458 ~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------------~~~~~~G~GlLDa~~AV~~a~ 525 (1354)
T 3lxu_X 458 MNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------------VDPFAQGHGLLNVEKAFEHLT 525 (1354)
T ss_dssp CCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT------------SCTTTSSSSBCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC------------CCcccccCCEeCHHHHHHHHH
Confidence 99999999999999999986 79999999999999999998743 245689999999999999999
Q ss_pred ccccccccceeecccCCCC-ccceeeeecccccccccCcccccccCCCceeeecCCccEEEEEEEEecC-------CC-C
Q 042259 605 VYEISHDDYVRYLCGKNYT-DQQIEGIVDHDVQCSKVSSIAEAELNYPSFSVKLGSSPQTYNRTVTNVG-------QD-N 675 (745)
Q Consensus 605 v~d~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~tv~n~~-------~~-~ 675 (745)
.|+....+++.|+|..+.. ...|.+. .. .. ....+++++|+.+= .. .
T Consensus 526 ~~~~~p~~~v~f~~~v~~~~~rgIylR--~~------------~~----------~~~~~~tv~V~p~f~~~~~~~~~~~ 581 (1354)
T 3lxu_X 526 EHRQSKDNMLRFSVRVGNNADKGIHLR--QG------------VQ----------RNSIDYNVYIEPIFYNDKEADPKDK 581 (1354)
T ss_dssp TTTTCGGGGEEEEEEETTTTBSSEEEC--SS------------CC----------CSCEEEEEEEEEEESSCSCSSSTTC
T ss_pred hcCCCCccceEEEEEecCCCCCceEEe--cc------------cc----------CCceEEEEEEeeeecCcccCChhhc
Confidence 9999999999999998743 2222221 00 00 11233334332211 11 1
Q ss_pred eeE--EEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEEEEEc-----CceEEEeeEEEEeC
Q 042259 676 SFY--THHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYLSWVS-----ATHTVRSPIAIGFE 745 (745)
Q Consensus 676 ~ty--~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~~~-----~~~~v~~P~~~~~~ 745 (745)
..| ++.+.... --|+ -|..|.+ .++.++|.|++.+...+. ..+++.|...| .+..+|+||.|.-|
T Consensus 582 i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~~L~~-G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 582 FNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPTGLQP-GVHSAVIRAYDTDCVQKGSLFEIPVTVVQP 653 (1354)
T ss_dssp SCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGGGCCS-EEEEEEEEEEESSCTTSCCSEEEEEEEEEC
T ss_pred cceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCCCCCC-cceeEEEEEEEcCCcccCceEEeeEEEEee
Confidence 111 22222211 1222 3666666 378899999999998766 78999998775 47999999988754
No 25
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=1.6e-48 Score=421.42 Aligned_cols=289 Identities=28% Similarity=0.360 Sum_probs=216.6
Q ss_pred CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccc----c-CCcccCcceeeeeeCC----CC----C
Q 042259 132 NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCE----L-EGANCNNKIIGARNFL----NK----S 198 (745)
Q Consensus 132 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~----~-~~~~~n~ki~~~~~~~----~~----~ 198 (745)
...+|+.+++|+||+|+||||||+ +||+|.++-.. .|+-... . +.............+. .+ .
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPDPR 95 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTTCGG
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCccccccccccccccCCCCcc
Confidence 456999999999999999999998 99999864221 1110000 0 0000000000000000 00 0
Q ss_pred CCCCCCCCChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHh----------
Q 042259 199 EPPIDNDGHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVE---------- 268 (745)
Q Consensus 199 ~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~---------- 268 (745)
....|..||||||||||+|...+.. + +.||||+|+|+.+|++. ..++...+++++|+|+++
T Consensus 96 ~~~~d~~gHGT~vAgiia~~~~~~~-------g-~~GvAp~a~l~~~~v~~-~~~~~~~~~~~ai~~a~~~~~~~~~~~~ 166 (340)
T 3lpc_A 96 KERSDSSWHGSHVAGTIAAVTNNRI-------G-VAGVAYGAKVVPVRALG-RCGGYDSDISDGLYWAAGGRIAGIPENR 166 (340)
T ss_dssp GSCBCCCCHHHHHHHHHHCCCSSSS-------S-CCCTTTTSEEEEEECCB-TTBCCHHHHHHHHHHHHTCCCTTSCCCS
T ss_pred cCCCCCCCCHHHHHHHHHccCCCCC-------c-ceeecCCCEEEEEEEec-CCCCcHHHHHHHHHHHhccccccccccc
Confidence 2346788999999999999753322 2 47999999999999998 666888999999999998
Q ss_pred CCCcEEEEccCCCCCCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCC-CcccCCCceEEEeecccccceEEEEEeCCCe
Q 042259 269 EGVDVLSISLGSPSLPFFADAMATAAFTASQKGILVSCSAGNSGPNSS-TLANEAPWMLTVGASTIDRSIVALTQLGNQE 347 (745)
Q Consensus 269 ~g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~ 347 (745)
.+++|||||||.... ....+..++.++.++|+++|+||||+|.... .+++..+++|+|||++
T Consensus 167 ~~~~Vin~S~G~~~~--~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~--------------- 229 (340)
T 3lpc_A 167 NPAKVINMSLGSDGQ--CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATT--------------- 229 (340)
T ss_dssp SCCSEEEECCCEESC--CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEEC---------------
T ss_pred CCCeEEEeCcCCCCC--cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCC---------------
Confidence 889999999997532 2234555666888999999999999997754 4678889999999952
Q ss_pred eeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCC
Q 042259 348 TYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDEL 427 (745)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 427 (745)
T Consensus 230 -------------------------------------------------------------------------------- 229 (340)
T 3lpc_A 230 -------------------------------------------------------------------------------- 229 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCcc
Q 042259 428 FDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVS 507 (745)
Q Consensus 428 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~ 507 (745)
..+.++.||++||. |||+|||.+
T Consensus 230 -------------------------------------------------~~~~~~~~S~~g~~--------~di~ApG~~ 252 (340)
T 3lpc_A 230 -------------------------------------------------SRGIRASFSNYGVD--------VDLAAPGQD 252 (340)
T ss_dssp -------------------------------------------------TTSSBCTTCCBSTT--------CCEEEECSS
T ss_pred -------------------------------------------------CCCCcCCCCCCCCC--------ceEEecCCC
Confidence 11267899999974 599999999
Q ss_pred EEeccCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhh-C---CCCCHHHHHHHHhcccccccCCCCcccCCCCCC
Q 042259 508 ILAAWPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSA-H---PDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLP 583 (745)
Q Consensus 508 I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 583 (745)
|+++++.... ......|..++|||||||||||++|||+|+ + |.+++++||++|++||+++..
T Consensus 253 i~s~~~~~~~--~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~------------ 318 (340)
T 3lpc_A 253 ILSTVDSGTR--RPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG------------ 318 (340)
T ss_dssp EEEEEESCSS--SCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS------------
T ss_pred eecccCCCCc--CCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC------------
Confidence 9999876331 112256999999999999999999999998 5 999999999999999997632
Q ss_pred CCCcccCCCCCCccCCCCC
Q 042259 584 ADLFAVGAGHVNPSKANDP 602 (745)
Q Consensus 584 ~~~~~~G~G~vn~~~A~~~ 602 (745)
.+...||||+||+.+||+.
T Consensus 319 ~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 319 RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp CCSSCCCSSBCCHHHHHHH
T ss_pred CCCCCcccceecHHHHHHH
Confidence 2456899999999999873
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=2.5e-47 Score=399.14 Aligned_cols=236 Identities=32% Similarity=0.424 Sum_probs=202.7
Q ss_pred CCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCCCCChhhhh
Q 042259 133 SGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDNDGHGTHTA 212 (745)
Q Consensus 133 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~~gHGThVA 212 (745)
..+|..+++|+||+|+|||||||++||+|.++ +..+++|.++..++.|..|||||||
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~-----------------------~~~~~d~~~~~~~~~d~~gHGT~vA 77 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR-----------------------ASSGYDFIDNDYDATDCNGHGTHVA 77 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC-----------------------EEEEEETTTTBSCCCCSSSHHHHHH
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc-----------------------cccCeecCCCCCCCCCCCCcHHHHH
Confidence 35799999999999999999999999999853 4456777765456788999999999
Q ss_pred hhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHh--CCCcEEEEccCCCCCCChhhH
Q 042259 213 STAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVE--EGVDVLSISLGSPSLPFFADA 289 (745)
Q Consensus 213 Giiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~--~g~dVIn~S~G~~~~~~~~~~ 289 (745)
|||+|.. .||||+|+|+.+|+++ +.+ +..++++++|+|+++ .+++|||||||.... +.
T Consensus 78 giia~~~--------------~GvAp~a~i~~~~v~~-~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~~----~~ 138 (278)
T 2b6n_A 78 GTIGGST--------------YGVAKNVNVVGVRVLN-CSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGAS----QA 138 (278)
T ss_dssp HHHHCTT--------------TCSSTTCEEEEEECSC-TTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEECC----HH
T ss_pred HHHHCCC--------------cCCCCCCeEEEEEEEC-CCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCcC----HH
Confidence 9999862 5999999999999998 544 788899999999997 599999999998653 44
Q ss_pred HHHHHHHHhcCCcEEEEccCCCCCCCC-CcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeE
Q 042259 290 MATAAFTASQKGILVSCSAGNSGPNSS-TLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLV 368 (745)
Q Consensus 290 ~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (745)
+..++.++.++|+++|+||||+|.... .+|+..+++|+||+++.
T Consensus 139 ~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~----------------------------------- 183 (278)
T 2b6n_A 139 TDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS----------------------------------- 183 (278)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-----------------------------------
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC-----------------------------------
Confidence 555666888999999999999998754 35778899999999521
Q ss_pred ecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHh
Q 042259 369 YPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAA 448 (745)
Q Consensus 369 ~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~ 448 (745)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceee
Q 042259 449 GERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTM 528 (745)
Q Consensus 449 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~ 528 (745)
.+.++.||++||.. ||+|||++|+++++... ..|..
T Consensus 184 -----------------------------~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~-------~~~~~ 219 (278)
T 2b6n_A 184 -----------------------------NDSRSSFSNYGTCL--------DIYAPGSSITSSWYTSN-------SATNT 219 (278)
T ss_dssp -----------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTTST-------TCEEE
T ss_pred -----------------------------CCCcCCcCCCCCCC--------eEEeCCCCeECcccCCC-------CCEEE
Confidence 12678999999865 99999999999987532 67899
Q ss_pred eccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccc
Q 042259 529 ISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIV 569 (745)
Q Consensus 529 ~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~ 569 (745)
++|||||||||||++|||+|++|+|++.+||++|++||++.
T Consensus 220 ~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 220 ISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred eCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 99999999999999999999999999999999999999865
No 27
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=8.4e-48 Score=402.24 Aligned_cols=239 Identities=32% Similarity=0.450 Sum_probs=203.3
Q ss_pred CccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCCCCChhhhhhh
Q 042259 135 FWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDNDGHGTHTAST 214 (745)
Q Consensus 135 ~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~~gHGThVAGi 214 (745)
.|.. .+|+||+|+|||||||++||+|.++ +...++|. ..+.|..|||||||||
T Consensus 24 ~~~~-~~G~gv~VaViDsGvd~~H~~l~~~-----------------------~~~~~~~~---~~~~d~~gHGT~vAgi 76 (279)
T 2pwa_A 24 YYDE-SAGQGSCVYVIDTGIEASHPEFEGR-----------------------AQMVKTYY---YSSRDGNGHGTHCAGT 76 (279)
T ss_dssp ECCT-TTTTTEEEEEEESCCCTTCGGGTTC-----------------------EEEEEESS---SCSSCSSSHHHHHHHH
T ss_pred cccC-CCCCCCEEEEEeCCCCCCChhHhCc-----------------------cccccCCC---CCCCCCCCCHHHHHHH
Confidence 3443 7899999999999999999999853 44566776 2467889999999999
Q ss_pred hcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhCCC-------cEEEEccCCCCCCCh
Q 042259 215 AAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEEGV-------DVLSISLGSPSLPFF 286 (745)
Q Consensus 215 iag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~g~-------dVIn~S~G~~~~~~~ 286 (745)
|+|+. .||||+|+|+.+|+++ ..+ +..++++++|+|++++++ +|||||||...
T Consensus 77 ia~~~--------------~GvAp~a~i~~~~v~~-~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~~---- 137 (279)
T 2pwa_A 77 VGSRT--------------YGVAKKTQLFGVKVLD-DNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGY---- 137 (279)
T ss_dssp HHCTT--------------TCSSTTCEEEEEECSC-TTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEEC----
T ss_pred HHhcc--------------cccCCCCEEEEEEeEc-CCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCCC----
Confidence 99862 6999999999999998 555 788999999999999887 99999999753
Q ss_pred hhHHHHHHHHHhcCCcEEEEccCCCCCCCC-CcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCce
Q 042259 287 ADAMATAAFTASQKGILVSCSAGNSGPNSS-TLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQL 365 (745)
Q Consensus 287 ~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (745)
.+.+..++.++.++|+++|+||||+|.... .+|+..+++|+|||++.
T Consensus 138 ~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-------------------------------- 185 (279)
T 2pwa_A 138 SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR-------------------------------- 185 (279)
T ss_dssp CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--------------------------------
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC--------------------------------
Confidence 345666666888999999999999998653 45788899999999521
Q ss_pred eeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEc
Q 042259 366 PLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVS 445 (745)
Q Consensus 366 ~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~ 445 (745)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccc
Q 042259 446 YAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKST 525 (745)
Q Consensus 446 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~ 525 (745)
.+.++.||++||.+ ||+|||++|+++++. +.
T Consensus 186 --------------------------------~~~~~~~S~~G~~~--------di~APG~~i~s~~~~---------~~ 216 (279)
T 2pwa_A 186 --------------------------------YDRRSSFSNYGSVL--------DIFGPGTDILSTWIG---------GS 216 (279)
T ss_dssp --------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEEETT---------TE
T ss_pred --------------------------------CCCcCCcCCCCCcc--------eEEEecCCeEEeecC---------CC
Confidence 12678999999975 999999999999987 68
Q ss_pred eeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCCCCCCc
Q 042259 526 FTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGAGHVNP 596 (745)
Q Consensus 526 y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~ 596 (745)
|..++|||||||||||++|||+|+ |++++.+||++|++||++... ..+|+|.+|+
T Consensus 217 ~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~---------------~~~~~g~~n~ 271 (279)
T 2pwa_A 217 TRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL---------------SNIPFGTVNL 271 (279)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC---------------BSCCTTSCCE
T ss_pred EEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc---------------CCCCCCCccE
Confidence 999999999999999999999999 999999999999999987522 2467888777
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.8e-47 Score=400.43 Aligned_cols=237 Identities=32% Similarity=0.439 Sum_probs=203.2
Q ss_pred CCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCCCCChhhhh
Q 042259 133 SGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDNDGHGTHTA 212 (745)
Q Consensus 133 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~~gHGThVA 212 (745)
..+|..+.+|+||+|+|||||||++||+|.++ +...++|.. ....|..|||||||
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~--~~~~d~~gHGT~vA 75 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR-----------------------ARVGYDALG--GNGQDCNGHGTHVA 75 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC-----------------------EEEEEETTS--SCSCCSSSHHHHHH
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC-----------------------eeccccCCC--CCCCCCCCCHHHHH
Confidence 45899999999999999999999999999753 445566665 45678899999999
Q ss_pred hhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHhC--CCcEEEEccCCCCCCChhhHH
Q 042259 213 STAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVEE--GVDVLSISLGSPSLPFFADAM 290 (745)
Q Consensus 213 Giiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~--g~dVIn~S~G~~~~~~~~~~~ 290 (745)
|||+|.. .||||+|+|+.+|+++........+++++++|++++ +++|||||||.... ..+
T Consensus 76 giiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~~~----~~~ 137 (276)
T 4dzt_A 76 GTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGVS----TAL 137 (276)
T ss_dssp HHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEECC----HHH
T ss_pred HHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCCCC----HHH
Confidence 9999872 699999999999999833348889999999999987 89999999997643 455
Q ss_pred HHHHHHHhcCCcEEEEccCCCCCCCCCc-ccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCceeeEe
Q 042259 291 ATAAFTASQKGILVSCSAGNSGPNSSTL-ANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLPLVY 369 (745)
Q Consensus 291 ~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (745)
..++.++.++|+++|+||||+|...... ++..+++|+||+.+
T Consensus 138 ~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~------------------------------------- 180 (276)
T 4dzt_A 138 DNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATT------------------------------------- 180 (276)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-------------------------------------
T ss_pred HHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEEC-------------------------------------
Confidence 6666688899999999999999876543 78889999999942
Q ss_pred cCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEchHhH
Q 042259 370 PGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSYAAG 449 (745)
Q Consensus 370 ~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g 449 (745)
T Consensus 181 -------------------------------------------------------------------------------- 180 (276)
T 4dzt_A 181 -------------------------------------------------------------------------------- 180 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccceeee
Q 042259 450 ERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTFTMI 529 (745)
Q Consensus 450 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y~~~ 529 (745)
..+.+++||++||.. ||+|||++|+++++... ..|..+
T Consensus 181 ---------------------------~~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~-------~~~~~~ 218 (276)
T 4dzt_A 181 ---------------------------SSDARASFSNYGSCV--------DLFAPGASIPSAWYTSD-------TATQTL 218 (276)
T ss_dssp ---------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECTTSS-------SCEEEE
T ss_pred ---------------------------CCCCcCCcCCCCCCc--------eEEeCCCCeEccccCCC-------CceEEe
Confidence 122678999999976 99999999999988643 579999
Q ss_pred ccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccC
Q 042259 530 SGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNL 571 (745)
Q Consensus 530 sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~ 571 (745)
+|||||||+|||++|||+|++|++++++||++|++||++...
T Consensus 219 sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 219 NGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred eEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 999999999999999999999999999999999999998643
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=3.6e-46 Score=431.30 Aligned_cols=291 Identities=24% Similarity=0.275 Sum_probs=204.2
Q ss_pred CCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCC--CCCCC-CCCChh
Q 042259 133 SGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKS--EPPID-NDGHGT 209 (745)
Q Consensus 133 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~--~~~~d-~~gHGT 209 (745)
..+|..+++|+||+|||||||||++||+|.++- ..+.++|..+. ..+.| +.||||
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~----------------------~~~~~~~~~~~~d~~p~d~~~gHGT 117 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV----------------------RPGSKNVVTGSDDPTPTDPDTGHGT 117 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB----------------------CSCCBCTTTCSSCCCCCSTTCCHHH
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc----------------------ccCceeccCCCCCCCCCCCCCCCcc
Confidence 458999999999999999999999999998541 11234554432 22344 789999
Q ss_pred hhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCC-H-HHHHHHHHHHHhCCCcEEEEccCCCCC----
Q 042259 210 HTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCP-E-SIVNAAIDAAVEEGVDVLSISLGSPSL---- 283 (745)
Q Consensus 210 hVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~-~-~~i~~ai~~a~~~g~dVIn~S~G~~~~---- 283 (745)
||||||||. .++. + +.||||+|+|+.+|+++ ..+.. . ..+++....+..++++|||||||....
T Consensus 118 ~vAGiiaa~-~n~~-------g-~~GVAp~A~l~~vkv~~-~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~~~~~~~~ 187 (600)
T 2oxa_A 118 SVSGIIAAV-DNAI-------G-TKGIAPRAQLQGFNLLD-DNSQQLQKDWLYALGDSNASRDNRVFNHSYRMSVVDPRS 187 (600)
T ss_dssp HHHHHHHCC-SSSS-------S-CCCSSTTCEEEEECTTS-TTCCCCHHHHHHHTTTSHHHHTCSEEEECCCCCCSSCCC
T ss_pred HHHHHhhcc-cCCC-------c-ceEEccCCceEEEeeec-CcccchHHHHHHHHhhhhcccCCeEEEEeccCCCCCccc
Confidence 999999998 2211 1 37999999999999998 55433 2 334444344677899999999998642
Q ss_pred -CChhhHHHHHHHH---HhcCCcEEEEccCCCCCCCC----------------------CcccCCCceEEEeecccccce
Q 042259 284 -PFFADAMATAAFT---ASQKGILVSCSAGNSGPNSS----------------------TLANEAPWMLTVGASTIDRSI 337 (745)
Q Consensus 284 -~~~~~~~~~a~~~---a~~~Gi~vV~AAGN~g~~~~----------------------~~~~~~p~vitVga~~~~~~~ 337 (745)
......+..++.. +.++|++||+||||+|.... ..++.++|+|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA~------ 261 (600)
T 2oxa_A 188 ANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSAL------ 261 (600)
T ss_dssp SCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEEE------
T ss_pred cCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEecc------
Confidence 1122333333322 55889999999999986421 111223345555542
Q ss_pred EEEEEeCCCeeeeeeeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCc
Q 042259 338 VALTQLGNQETYDGETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGG 417 (745)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga 417 (745)
T Consensus 262 -------------------------------------------------------------------------------- 261 (600)
T 2oxa_A 262 -------------------------------------------------------------------------------- 261 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecCCCCCccccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCc
Q 042259 418 AAMILMNDELFDYGTVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGIL 497 (745)
Q Consensus 418 ~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~ 497 (745)
...+.+++||++||+.
T Consensus 262 ----------------------------------------------------------~~~g~~a~fS~~G~~v------ 277 (600)
T 2oxa_A 262 ----------------------------------------------------------NADGVRSSYSSVGSNI------ 277 (600)
T ss_dssp ----------------------------------------------------------CTTSSBCTTCCBCTTE------
T ss_pred ----------------------------------------------------------cCCCCcCCcCCCCCCe------
Confidence 2234788999999987
Q ss_pred cCceEeCCccEEeccCCCC-------c------------------cCCCcccceeeeccccchhHHHHHHHHHHHhhCCC
Q 042259 498 KPDIIGPGVSILAAWPFSE-------E------------------NITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPD 552 (745)
Q Consensus 498 KPDi~APG~~I~sa~~~~~-------~------------------~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ 552 (745)
||+|||++|.+..+.-. . ..+...+.|..++|||||||||||+||||+|++|+
T Consensus 278 --dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s~~P~ 355 (600)
T 2oxa_A 278 --FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPD 355 (600)
T ss_dssp --EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTT
T ss_pred --EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHHhCCC
Confidence 99999999655443210 0 00011234899999999999999999999999999
Q ss_pred CCHHHHHHHHhcccccccCCCCcc--------------------cCCCCCCCCCcccCCCCCCccCCCCCCcccc
Q 042259 553 WSPAAIKSAIMTTADIVNLEGKPI--------------------MNHHLLPADLFAVGAGHVNPSKANDPGLVYE 607 (745)
Q Consensus 553 ~s~~~ik~~L~~TA~~~~~~g~~~--------------------~~~~~~~~~~~~~G~G~vn~~~A~~~~lv~d 607 (745)
|++++||++|++||++++..+.++ .........++.||||+||+.+|++.+..+.
T Consensus 356 lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 356 LSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp SCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHhcc
Confidence 999999999999999987553221 1111222345789999999999998554443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=9.5e-47 Score=423.75 Aligned_cols=287 Identities=18% Similarity=0.191 Sum_probs=215.3
Q ss_pred CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCC------CCCCCC
Q 042259 132 NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSE------PPIDND 205 (745)
Q Consensus 132 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~------~~~d~~ 205 (745)
...+|+.+++|+||+|||||||||++||+|.++-.. ...++|.++.. .+.|..
T Consensus 27 ~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~---------------------~~~~d~~~~~~~p~~~~~~~d~~ 85 (471)
T 1p8j_A 27 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDP---------------------GASFDVNDQDPDPQPRYTQMNDN 85 (471)
T ss_dssp CHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBCG---------------------GGCEETTTTBSCCCCCCCTTCTT
T ss_pred hHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccCc---------------------cCcccccCCCCCCCCccCCCCCC
Confidence 456999999999999999999999999999864110 01344543321 345789
Q ss_pred CChhhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHh-CCCcEEEEccCCCCCC
Q 042259 206 GHGTHTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVE-EGVDVLSISLGSPSLP 284 (745)
Q Consensus 206 gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~-~g~dVIn~S~G~~~~~ 284 (745)
+|||||||||+|...++. + +.||||+|+|+.+|+++ +..+++++|++++++ ++++|||||||.....
T Consensus 86 gHGT~vAGiiaa~~~n~~-------g-~~GvAp~a~i~~~rv~~----g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~ 153 (471)
T 1p8j_A 86 RHGTRCAGEVAAVANNGV-------C-GVGVAYNARIGGVRMLD----GEVTDAVEARSLGLNPNHIHIYSASWGPEDDG 153 (471)
T ss_dssp CHHHHHHHHHHCCSSSSS-------S-CCCTTTTSEEEEEECSS----SCCCHHHHHHHHTSCTTTCCEEEECCBSCCSS
T ss_pred CcHHHHHHHHHeeccCCC-------C-CEEECCCCeEEEEEccC----CchhHHHHHHHhhhccCCCeEEEeccCcCCCC
Confidence 999999999999753321 1 37999999999999997 346789999999999 8999999999975321
Q ss_pred ----ChhhHHHHHHHHHh-----cCCcEEEEccCCCCCCCCC----cccCCCceEEEeecccccceEEEEEeCCCeeeee
Q 042259 285 ----FFADAMATAAFTAS-----QKGILVSCSAGNSGPNSST----LANEAPWMLTVGASTIDRSIVALTQLGNQETYDG 351 (745)
Q Consensus 285 ----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~~----~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~ 351 (745)
.....+..++.++. .+|+++|+||||+|..... ....++++|+|||++.
T Consensus 154 ~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~------------------ 215 (471)
T 1p8j_A 154 KTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ------------------ 215 (471)
T ss_dssp SCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT------------------
T ss_pred CcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC------------------
Confidence 11222333333443 4799999999999976432 1234588999999521
Q ss_pred eeccCCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCcc
Q 042259 352 ETIFQPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYG 431 (745)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 431 (745)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEec
Q 042259 432 TVADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAA 511 (745)
Q Consensus 432 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa 511 (745)
.+.+++||++||.. ....+|...+||..|+++
T Consensus 216 ----------------------------------------------~g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~st 247 (471)
T 1p8j_A 216 ----------------------------------------------FGNVPWYSEACSST--LATTYSSGNQNEKQIVTT 247 (471)
T ss_dssp ----------------------------------------------TSCCCTTCCBCTTC--CEEEECCCSTTSCCEEEE
T ss_pred ----------------------------------------------CCCcccccCCCCcc--eEEeCCCCCCCCCCEEEe
Confidence 22678999999987 344556666667899999
Q ss_pred cCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCcccCCCCCCCCCcccCC
Q 042259 512 WPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIMNHHLLPADLFAVGA 591 (745)
Q Consensus 512 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~ 591 (745)
.... ..|..++|||||||||||++|||+|++|+|++++||++|++||++++.....+............|||
T Consensus 248 ~~~~--------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~~G~ 319 (471)
T 1p8j_A 248 DLRQ--------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGY 319 (471)
T ss_dssp ETTT--------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTTTBT
T ss_pred eCCC--------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCCCCC
Confidence 7642 56899999999999999999999999999999999999999999876543333222212234568999
Q ss_pred CCCCccCCCCCCcc
Q 042259 592 GHVNPSKANDPGLV 605 (745)
Q Consensus 592 G~vn~~~A~~~~lv 605 (745)
|+||+.+|++....
T Consensus 320 G~vda~~Av~~a~~ 333 (471)
T 1p8j_A 320 GLLDAGAMVALAQN 333 (471)
T ss_dssp CBCCHHHHHHHHHT
T ss_pred EEEcHhHHHHHhhc
Confidence 99999999985433
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=5.3e-46 Score=420.36 Aligned_cols=281 Identities=17% Similarity=0.195 Sum_probs=214.3
Q ss_pred CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCC---CCCCCCCh
Q 042259 132 NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEP---PIDNDGHG 208 (745)
Q Consensus 132 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~---~~d~~gHG 208 (745)
...+|..+++|+||+|||||||||++||+|.++-. ..+.++|.++... ..|..|||
T Consensus 43 ~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~---------------------~~~~~d~~~~~~~~~p~~d~~gHG 101 (503)
T 2id4_A 43 VLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFC---------------------AEGSWDFNDNTNLPKPRLSDDYHG 101 (503)
T ss_dssp CHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBC---------------------GGGCEETTTTBSCCCCCSTTTTHH
T ss_pred hHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhccc---------------------ccCcccCCCCCCCCCCCCCCCChH
Confidence 34589999999999999999999999999986411 0124556544322 25788999
Q ss_pred hhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCC----C
Q 042259 209 THTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVEEGVDVLSISLGSPSL----P 284 (745)
Q Consensus 209 ThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~g~dVIn~S~G~~~~----~ 284 (745)
|||||||+|...++ .+ +.||||+|+|+.+|+++ .. +...++++||+|+++++ +|||||||.... .
T Consensus 102 T~vAGiiaa~~~n~-------~~-~~GvAp~a~i~~~rv~~-~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~~~~~~ 170 (503)
T 2id4_A 102 TRCAGEIAAKKGNN-------FC-GVGVGYNAKISGIRILS-GD-ITTEDEAASLIYGLDVN-DIYSCSWGPADDGRHLQ 170 (503)
T ss_dssp HHHHHHHHCCSSSS-------SS-CCCTTTTSEEEEEECTT-SC-CCHHHHHHHTTTTTTTC-SEEEECEESCCSSSCCB
T ss_pred HHHHHHHHhccCCC-------CC-cEEECCCCEEEEEEeeC-CC-CChHHHHHHHHhHhhcC-CEEEeCCCcCCCCcccc
Confidence 99999999975322 11 37999999999999997 33 57788999999999988 999999997631 1
Q ss_pred ChhhHHHHHHHHHh-----cCCcEEEEccCCCCCCCC--Ccc--cCCCceEEEeecccccceEEEEEeCCCeeeeeeecc
Q 042259 285 FFADAMATAAFTAS-----QKGILVSCSAGNSGPNSS--TLA--NEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIF 355 (745)
Q Consensus 285 ~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~--~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (745)
.....+..++.++. .+|+++|+||||+|.... .++ ..++++|+|||++
T Consensus 171 ~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~----------------------- 227 (503)
T 2id4_A 171 GPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAID----------------------- 227 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEEC-----------------------
T ss_pred CchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeC-----------------------
Confidence 12234444444554 489999999999997542 233 2567899999852
Q ss_pred CCCCCCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCcccccc
Q 042259 356 QPKDFPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVAD 435 (745)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~ 435 (745)
T Consensus 228 -------------------------------------------------------------------------------- 227 (503)
T 2id4_A 228 -------------------------------------------------------------------------------- 227 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEe----CCccEEec
Q 042259 436 NHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIG----PGVSILAA 511 (745)
Q Consensus 436 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~A----PG~~I~sa 511 (745)
..+.+++||++||.. |++| ||..|+++
T Consensus 228 -----------------------------------------~~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st 258 (503)
T 2id4_A 228 -----------------------------------------HKDLHPPYSEGCSAV--------MAVTYSSGSGEYIHSS 258 (503)
T ss_dssp -----------------------------------------TTSCCCTTCCCCTTE--------EEEEECSBTTBCEEEE
T ss_pred -----------------------------------------CCCCcCCcCCCCCcc--------eEeecCCCCCCceEee
Confidence 122678999999987 8887 89999999
Q ss_pred cCCCCccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCC-CCcccCCCCCCCCCcccC
Q 042259 512 WPFSEENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLE-GKPIMNHHLLPADLFAVG 590 (745)
Q Consensus 512 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~-g~~~~~~~~~~~~~~~~G 590 (745)
.... ..|..++|||||||||||++|||+|++|+|++.+||++|++||+++... ...+............||
T Consensus 259 ~~~~--------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~~~~~~G 330 (503)
T 2id4_A 259 DING--------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHRYG 330 (503)
T ss_dssp CSTT--------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBTTTB
T ss_pred cCCC--------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCccCcccC
Confidence 5431 6899999999999999999999999999999999999999999987643 111111111123456899
Q ss_pred CCCCCccCCCCCCc
Q 042259 591 AGHVNPSKANDPGL 604 (745)
Q Consensus 591 ~G~vn~~~A~~~~l 604 (745)
||+||+++|++...
T Consensus 331 ~G~vda~~Av~~a~ 344 (503)
T 2id4_A 331 FGKIDAHKLIEMSK 344 (503)
T ss_dssp TCBCCHHHHHHHHT
T ss_pred CcEecHHHHHHHHh
Confidence 99999999998543
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=2.1e-45 Score=408.15 Aligned_cols=267 Identities=22% Similarity=0.270 Sum_probs=200.2
Q ss_pred CccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCC-CCC-----CCCCCCCCCh
Q 042259 135 FWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFL-NKS-----EPPIDNDGHG 208 (745)
Q Consensus 135 ~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~-~~~-----~~~~d~~gHG 208 (745)
.|..+++|+||+|+|||||||++||+|.++. ....+++. +.+ ..+.|..|||
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~----------------------~~~~~~~v~~~dg~~f~~~~~D~~GHG 75 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV----------------------MVTDFENVPEEDGTRFHRQASKCDSHG 75 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE----------------------EEEEEECCCCCC-------CTTTTHHH
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc----------------------cccCcccccCCCCccccCCCCCCCChH
Confidence 7888999999999999999999999998641 01111211 111 2356889999
Q ss_pred hhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCC-CCHHHHHHHHHHHHhC------CCcEEEEccCCC
Q 042259 209 THTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLG-CPESIVNAAIDAAVEE------GVDVLSISLGSP 281 (745)
Q Consensus 209 ThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g-~~~~~i~~ai~~a~~~------g~dVIn~S~G~~ 281 (745)
|||||||+|+. .||||+|+|+.+|+++ ..+ +..+++++||+|+++. +++|||||||+.
T Consensus 76 ThVAGIIag~~--------------~GVAP~A~L~~vkVl~-~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~ 140 (546)
T 2qtw_B 76 THLAGVVSGRD--------------AGVAKGASMRSLRVLN-CQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG 140 (546)
T ss_dssp HHHHHHHHCTT--------------TCSSTTCEEEEEECSC-TTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEE
T ss_pred HHHHHHHhccC--------------CCcCCCCEEEEEEEEC-CCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCC
Confidence 99999999873 5999999999999998 555 7788999999999974 899999999975
Q ss_pred CCCChhhHHHHHHHHHhcCCcEEEEccCCCCCCCC-CcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCC
Q 042259 282 SLPFFADAMATAAFTASQKGILVSCSAGNSGPNSS-TLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDF 360 (745)
Q Consensus 282 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (745)
. ...+..++.++.++|+++|+||||+|.+.. .+|+..+++|+|||++.+.
T Consensus 141 ~----s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g------------------------- 191 (546)
T 2qtw_B 141 Y----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQD------------------------- 191 (546)
T ss_dssp C----CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTS-------------------------
T ss_pred C----cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCC-------------------------
Confidence 3 345566666888999999999999998653 4578899999999963211
Q ss_pred CCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCcccc
Q 042259 361 PSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLP 440 (745)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p 440 (745)
T Consensus 192 -------------------------------------------------------------------------------- 191 (546)
T 2qtw_B 192 -------------------------------------------------------------------------------- 191 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCcee----cccCCCCCCCCCCCccCceEeCCccEEeccCCCC
Q 042259 441 AVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVA----VFSSRGPNTASPGILKPDIIGPGVSILAAWPFSE 516 (745)
Q Consensus 441 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a----~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~ 516 (745)
.++ .||++||. |||+|||++|+++++...
T Consensus 192 ---------------------------------------~~a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~ 224 (546)
T 2qtw_B 192 ---------------------------------------QPVTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS 224 (546)
T ss_dssp ---------------------------------------CBCEETTEECCBSTT--------CCEEEECSSEEEECTTST
T ss_pred ---------------------------------------CcccccCCcCCCCCc--------ceEEecCccEEeeccCCC
Confidence 111 28999974 499999999999988633
Q ss_pred ccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCCccc------CCC---CCCCCCc
Q 042259 517 ENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGKPIM------NHH---LLPADLF 587 (745)
Q Consensus 517 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~------~~~---~~~~~~~ 587 (745)
..|..++|||||||||||++|||+|++|+|+++|||++|++||.+.......+. ..+ ..+....
T Consensus 225 -------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~ 297 (546)
T 2qtw_B 225 -------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTH 297 (546)
T ss_dssp -------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTC
T ss_pred -------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhccCCccc
Confidence 578999999999999999999999999999999999999999976432211000 000 1122455
Q ss_pred ccCCCC--CCccCCCC
Q 042259 588 AVGAGH--VNPSKAND 601 (745)
Q Consensus 588 ~~G~G~--vn~~~A~~ 601 (745)
.+|+|+ .++..+..
T Consensus 298 ~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 298 GAGWQLFCRTVWSAHS 313 (546)
T ss_dssp C--CCCEEEEEECCCC
T ss_pred ccCCCcchhchhccCC
Confidence 678888 77777765
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.8e-45 Score=385.95 Aligned_cols=229 Identities=30% Similarity=0.407 Sum_probs=195.8
Q ss_pred CccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCCCCCCCCCChhhhhhh
Q 042259 135 FWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSEPPIDNDGHGTHTAST 214 (745)
Q Consensus 135 ~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~d~~gHGThVAGi 214 (745)
+|+.. +|+||+|+|||||||++||+|.++ +...++|..+ ..|..|||||||||
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~~---~~d~~gHGT~vAgi 77 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR-----------------------AKQIKSYAST---ARDGHGHGTHCAGT 77 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC-----------------------EEEEEECSSS---SSCSSSHHHHHHHH
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc-----------------------cccccCCCCC---CCCCCCcHHHHHHH
Confidence 56665 999999999999999999999853 4455666643 33889999999999
Q ss_pred hcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHhCC-------CcEEEEccCCCCCCChh
Q 042259 215 AAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVEEG-------VDVLSISLGSPSLPFFA 287 (745)
Q Consensus 215 iag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~~g-------~dVIn~S~G~~~~~~~~ 287 (745)
|+|+. .||||+|+|+.+|+++....+...+++++++|+++++ ++|||||||... .
T Consensus 78 i~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~~----~ 139 (279)
T 3f7m_A 78 IGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGGY----S 139 (279)
T ss_dssp HHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEEC----C
T ss_pred HhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcCc----c
Confidence 99862 6999999999999998333488899999999999876 899999999753 3
Q ss_pred hHHHHHHHHHhcCCcEEEEccCCCCCCCCC-cccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCCCCCCcee
Q 042259 288 DAMATAAFTASQKGILVSCSAGNSGPNSST-LANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKDFPSKQLP 366 (745)
Q Consensus 288 ~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (745)
+.+..++.++.++|+++|+||||+|..... +++..+++|+|||++
T Consensus 140 ~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~---------------------------------- 185 (279)
T 3f7m_A 140 AALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATD---------------------------------- 185 (279)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC----------------------------------
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecC----------------------------------
Confidence 556666668889999999999999987544 378889999999952
Q ss_pred eEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccccEEEEch
Q 042259 367 LVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVLPAVYVSY 446 (745)
Q Consensus 367 ~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~ 446 (745)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 3f7m_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCCCCccCCCcccce
Q 042259 447 AAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPFSEENITNTKSTF 526 (745)
Q Consensus 447 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~~~~~~~~~~~~y 526 (745)
..+.+++||++||.. ||+|||++|+++++. +.|
T Consensus 186 ------------------------------~~~~~~~~S~~g~~~--------di~ApG~~i~s~~~~---------~~~ 218 (279)
T 3f7m_A 186 ------------------------------SNDVRSTFSNYGRVV--------DIFAPGTSITSTWIG---------GRT 218 (279)
T ss_dssp ------------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECGG---------GCE
T ss_pred ------------------------------CCCCCCCCCCCCCCC--------eEEECCCCeEeecCC---------CCE
Confidence 113678999999966 999999999999987 779
Q ss_pred eeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhccccccc
Q 042259 527 TMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVN 570 (745)
Q Consensus 527 ~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 570 (745)
..++|||||||+|||++|||+|++|+ ++++||++|++||++..
T Consensus 219 ~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 219 NTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred EEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 99999999999999999999999999 99999999999998753
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.4e-43 Score=411.33 Aligned_cols=311 Identities=21% Similarity=0.220 Sum_probs=200.2
Q ss_pred CCCCccCCCCCCccEEEEecCCCCCCCCCCCCCCCCCCCCccccccccCCcccCcceeeeeeCCCCCC---CCCCCCCCh
Q 042259 132 NSGFWKDSNLGKGVIIGVLDMGITPGHPSFSDEGMPPPPAKWKGKCELEGANCNNKIIGARNFLNKSE---PPIDNDGHG 208 (745)
Q Consensus 132 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~---~~~d~~gHG 208 (745)
...+|..+++|+||+|||||||||++||||.++- ..+.++|..+.. +..|+++||
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~----------------------~~~~~~~~~~~~dp~p~~~~~gHG 116 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV----------------------RPGSKNVVTGSDDPTPTDPDTAHG 116 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB----------------------CSCCBCTTTSSSCCCCCSTTCCHH
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc----------------------ccCcceeecCCCCCCCCCCCCChH
Confidence 3458999999999999999999999999998641 112334443322 234578999
Q ss_pred hhhhhhhcccccCCCcccCCCCcceeeeccCceEEeeecccCCCCCCHHHHHHHH-HHHHhCCCcEEEEccCCCC-C---
Q 042259 209 THTASTAAGNFVNGANLFGQANGTAAGMAPLAHLAIYKVCETDLGCPESIVNAAI-DAAVEEGVDVLSISLGSPS-L--- 283 (745)
Q Consensus 209 ThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai-~~a~~~g~dVIn~S~G~~~-~--- 283 (745)
|||||||||.. +..| +.||||+|+|+.+|+++....+..++++.++ +++..++++|||+|||... .
T Consensus 117 ThVAGiIAa~~--------n~~g-~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~~~~~~ 187 (600)
T 3hjr_A 117 TSVSGIIAAVD--------NAIG-TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMSVVDPRS 187 (600)
T ss_dssp HHHHHHHHCCS--------SSSS-CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCCCSSCCC
T ss_pred HHHHHHHhEeC--------CCCC-cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCccccCCcc
Confidence 99999999862 1222 3799999999999999833347777877776 6677889999999999753 1
Q ss_pred --CChhhHHHHHHHH--HhcCCcEEEEccCCCCCCCCCcccCCCceEEEeecccccceEEEEEeCCCeeeeeeeccCCCC
Q 042259 284 --PFFADAMATAAFT--ASQKGILVSCSAGNSGPNSSTLANEAPWMLTVGASTIDRSIVALTQLGNQETYDGETIFQPKD 359 (745)
Q Consensus 284 --~~~~~~~~~a~~~--a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (745)
......+..++.. ...+|+++|+||||.+....... +.+.+. +++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~~------------g~~~------------ 237 (600)
T 3hjr_A 188 ANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNRT------------GNGP------------ 237 (600)
T ss_dssp SCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEEE------------SSCC------------
T ss_pred CCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------cccccC------------CCCC------------
Confidence 1112222222222 23689999999999764311000 000000 0000
Q ss_pred CCCCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCccccccCccc
Q 042259 360 FPSKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYGTVADNHVL 439 (745)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ 439 (745)
....+.|.... +......|.|.
T Consensus 238 --------------~~~~~~~~~d~--~~~~~~~IsVg------------------------------------------ 259 (600)
T 3hjr_A 238 --------------KLPFENSNLDP--SNSNFWNLVVS------------------------------------------ 259 (600)
T ss_dssp --------------CCCSSBTTSSG--GGGSSSEEEEE------------------------------------------
T ss_pred --------------CCCcccccccC--ccccCcceEEe------------------------------------------
Confidence 00000010000 00000111111
Q ss_pred cEEEEchHhHHHHHHHHhcCCCCeEEEEecceEecCCCCCceecccCCCCCCCCCCCccCceEeCCccE--------Eec
Q 042259 440 PAVYVSYAAGERIKAYINSTSSPTASIVFKGTVIGKKSAPEVAVFSSRGPNTASPGILKPDIIGPGVSI--------LAA 511 (745)
Q Consensus 440 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I--------~sa 511 (745)
.....+.++.||++|+.. +++|||..+ .+.
T Consensus 260 ----------------------------------A~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~ 297 (600)
T 3hjr_A 260 ----------------------------------ALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTD 297 (600)
T ss_dssp ----------------------------------EECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEEC
T ss_pred ----------------------------------eecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeec
Confidence 023345788999999987 899998763 222
Q ss_pred cCCCC-----------------ccCCCcccceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccccCCCC
Q 042259 512 WPFSE-----------------ENITNTKSTFTMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIVNLEGK 574 (745)
Q Consensus 512 ~~~~~-----------------~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~ 574 (745)
.++.. .........|..++|||||||||||++|||+|++|+|+++|||++|++||++++....
T Consensus 298 ~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~ 377 (600)
T 3hjr_A 298 LPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQ 377 (600)
T ss_dssp CSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCC
T ss_pred CCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCC
Confidence 22211 0011223568899999999999999999999999999999999999999999987665
Q ss_pred ccc--------------------CCC-CCCCCCcccCCCCCCccCCCCCCc
Q 042259 575 PIM--------------------NHH-LLPADLFAVGAGHVNPSKANDPGL 604 (745)
Q Consensus 575 ~~~--------------------~~~-~~~~~~~~~G~G~vn~~~A~~~~l 604 (745)
|+. .+. |.. ....||||+||+.+|++.+.
T Consensus 378 p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~-~s~~yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 378 PVMVSYTSSTGKVRDVKGLEGWERNAAGMW-FSPTYGFGLIDVNKALELAA 427 (600)
T ss_dssp CEEEEEECTTSCEEEEEEECCSEECTTSCE-EBTTTBTCBCCHHHHHHHHT
T ss_pred cccccccccccccccccccCCcccccCCce-EccccCCceecHHHHHHHhh
Confidence 421 111 222 34579999999999987443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=4.5e-25 Score=249.80 Aligned_cols=96 Identities=29% Similarity=0.431 Sum_probs=78.4
Q ss_pred eeeeccCceEEeeecccCCCCCCHHHHHHHHHHHHh---CCCcEEEEccCCCCCC---ChhhHHHHHHHHHhcCCcEEEE
Q 042259 233 AAGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVE---EGVDVLSISLGSPSLP---FFADAMATAAFTASQKGILVSC 306 (745)
Q Consensus 233 ~~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~---~g~dVIn~S~G~~~~~---~~~~~~~~a~~~a~~~Gi~vV~ 306 (745)
+.||||+|+|+.|++.+ ...+++++|+||++ ++++|||||||..... .+.+.+..++.+|..+||+||+
T Consensus 274 ~~gvAp~a~i~~~~~~~-----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~ 348 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAPN-----TDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLA 348 (552)
T ss_dssp HHHHCTTSEEEEEECCS-----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhccCCCCeEEEEEcCC-----CCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEE
Confidence 47999999999999754 45789999999998 7899999999986422 2344566666788899999999
Q ss_pred ccCCCCCCC--------CCcccCCCceEEEeeccc
Q 042259 307 SAGNSGPNS--------STLANEAPWMLTVGASTI 333 (745)
Q Consensus 307 AAGN~g~~~--------~~~~~~~p~vitVga~~~ 333 (745)
||||+|... ..+++.+|++++||+++.
T Consensus 349 AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 349 AAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp ECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred ecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 999999653 356688999999999754
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=9.5e-22 Score=212.12 Aligned_cols=99 Identities=19% Similarity=0.249 Sum_probs=80.5
Q ss_pred eeeccCceEEeeecccCCCCCCHHHHHHHHHHHHh-CCCcEEEEccCCCCC----CChhhHHHHHHHHHhcCCcEEEEcc
Q 042259 234 AGMAPLAHLAIYKVCETDLGCPESIVNAAIDAAVE-EGVDVLSISLGSPSL----PFFADAMATAAFTASQKGILVSCSA 308 (745)
Q Consensus 234 ~GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~~-~g~dVIn~S~G~~~~----~~~~~~~~~a~~~a~~~Gi~vV~AA 308 (745)
..+||+++++.|++.+ ..++..++++++|+||++ ++++|||||||.... ..+.+.+..++.++..+||+||+||
T Consensus 90 g~~aP~a~~~~~~~~~-~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~As 168 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMAD-QSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSS 168 (372)
T ss_dssp HHTTSCEEEEEEEEEC-TTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcCCCCcEEEEEeCC-CCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 3578999999999987 545677899999999998 899999999997631 1234567777778889999999999
Q ss_pred CCCCCCCC-------------CcccCCCceEEEeeccc
Q 042259 309 GNSGPNSS-------------TLANEAPWMLTVGASTI 333 (745)
Q Consensus 309 GN~g~~~~-------------~~~~~~p~vitVga~~~ 333 (745)
||+|...+ .+++.+|++++||+++.
T Consensus 169 Gd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 169 GDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp CSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 99997642 45678999999999754
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.00 E-value=2.8e-10 Score=127.91 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=63.0
Q ss_pred eeccCceEEeeecccCCCCCCHHHHHHHHHHHH--hCCCcEEEEccCCCCC---CChhhHHHHHHHHHhcCCcEEEEccC
Q 042259 235 GMAPLAHLAIYKVCETDLGCPESIVNAAIDAAV--EEGVDVLSISLGSPSL---PFFADAMATAAFTASQKGILVSCSAG 309 (745)
Q Consensus 235 GvAP~A~l~~~kv~~~~~g~~~~~i~~ai~~a~--~~g~dVIn~S~G~~~~---~~~~~~~~~a~~~a~~~Gi~vV~AAG 309 (745)
+++++..++.|.... . ......++..+++.. .+-++||++|||.... ..+.+.+...+.++..+||.|++|+|
T Consensus 263 a~~~~i~~~~~~~~g-~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASG 340 (544)
T 3edy_A 263 SAGANISTWVYSSPG-R-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASG 340 (544)
T ss_dssp HHSTTSEEEEECCCS-C-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCceEEEEecCC-c-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence 444555555554322 1 112233444444433 2458999999998742 23344556666678899999999999
Q ss_pred CCCCCC----------CCcccCCCceEEEeeccc
Q 042259 310 NSGPNS----------STLANEAPWMLTVGASTI 333 (745)
Q Consensus 310 N~g~~~----------~~~~~~~p~vitVga~~~ 333 (745)
|+|... ..+++.+|||++||+++.
T Consensus 341 D~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 341 DSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp SSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999742 246688999999999764
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.98 E-value=2.7e-10 Score=100.97 Aligned_cols=80 Identities=6% Similarity=0.073 Sum_probs=68.0
Q ss_pred CCCCceEEEEeCCCCCCCCccccccHHHHHHhhcccccccccccccccceEEEecceeeEEEEEeCHHHHHHhhcCCCeE
Q 042259 29 ANGLQTYIVHVRKPKQEGNFSIKLDLDNWYRTFLPDNISKSIDAHHRSRMVYGYRNVISGFAARLTAEEVKAMETKSGFI 108 (745)
Q Consensus 29 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~ 108 (745)
...+++|||+|++...... ...|.+|+.+++.+. ..+.++.|+|++.|+||+++|+++++++|+++|+|.
T Consensus 34 ~~ip~~YIV~lk~~~~~~~---~~~h~~~l~s~~~~~-------~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~ 103 (114)
T 2w2n_P 34 WRLPGTYVVVLKEETHLSQ---SERTARRLQAQAARR-------GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVD 103 (114)
T ss_dssp GEEEEEEEEEECTTCCHHH---HHHHHHHHHHHHHHT-------TCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEE
T ss_pred cCCCCcEEEEECCCCCHHH---HHHHHHHHHHHhhhc-------ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCcc
Confidence 4578999999998875433 567888999887653 356799999999999999999999999999999999
Q ss_pred EEEEccccCC
Q 042259 109 SARVENILEP 118 (745)
Q Consensus 109 ~v~~~~~~~~ 118 (745)
+||+++.++.
T Consensus 104 ~VE~D~~v~~ 113 (114)
T 2w2n_P 104 YIEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEEE
T ss_pred EEEeCceEec
Confidence 9999987753
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.91 E-value=2.1e-09 Score=89.21 Aligned_cols=75 Identities=11% Similarity=0.248 Sum_probs=57.7
Q ss_pred CCCCceEEEEeCCCCCCCCccccccHHHHHHhhcccccccccccccccceEEEecceeeEEEEEeCHHHHHHhhcCCCeE
Q 042259 29 ANGLQTYIVHVRKPKQEGNFSIKLDLDNWYRTFLPDNISKSIDAHHRSRMVYGYRNVISGFAARLTAEEVKAMETKSGFI 108 (745)
Q Consensus 29 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~ 108 (745)
...+++|||.||++..... . ..++++. .+.++.++|++ |+||+++++++++++|+++|+|.
T Consensus 5 ~~i~~~YIV~~k~~~~~~~------~---~~~~~~~---------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~ 65 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSCA------K---KEDVISE---------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVA 65 (80)
T ss_dssp ---CCEEEEEECTTCCSHH------H---HHHHHHT---------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEE
T ss_pred ccCCCCEEEEECCCCChHH------H---HHHHHHH---------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCcc
Confidence 3468999999998875321 1 1222222 35689999998 99999999999999999999999
Q ss_pred EEEEccccCCCCCC
Q 042259 109 SARVENILEPQTTH 122 (745)
Q Consensus 109 ~v~~~~~~~~~~~~ 122 (745)
+||+++.++++++.
T Consensus 66 ~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 66 YVEEDKLYRALSAT 79 (80)
T ss_dssp EEEECCEEEECCC-
T ss_pred EEEeCcEEEEeeec
Confidence 99999999887654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.80 E-value=3.2e-09 Score=95.17 Aligned_cols=80 Identities=6% Similarity=0.073 Sum_probs=63.1
Q ss_pred CCCCceEEEEeCCCCCCCCccccccHHHHHHhhcccccccccccccccceEEEecceeeEEEEEeCHHHHHHhhcCCCeE
Q 042259 29 ANGLQTYIVHVRKPKQEGNFSIKLDLDNWYRTFLPDNISKSIDAHHRSRMVYGYRNVISGFAARLTAEEVKAMETKSGFI 108 (745)
Q Consensus 29 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~ 108 (745)
...+++|||+||++..... ...+.+++.+++++. ..+.++.|+|++.|+||+++++++++++|+++|+|.
T Consensus 44 ~~Ip~~YIV~~K~~~~~~~---~~~~~~~l~~~~~~r-------~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~ 113 (124)
T 2qtw_A 44 WRLPGTYVVVLKEETHLSQ---SERTARRLQAQAARR-------GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVD 113 (124)
T ss_dssp GEEEEEEEEEECTTCCHHH---HHHHHHHHHHHHHHT-------TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEE
T ss_pred cCCCCCEEEEECCCCCHHH---HHHHHHHHHHHHhhc-------ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCc
Confidence 4578999999999876333 344445555443332 246789999999999999999999999999999999
Q ss_pred EEEEccccCC
Q 042259 109 SARVENILEP 118 (745)
Q Consensus 109 ~v~~~~~~~~ 118 (745)
+|++++.++.
T Consensus 114 ~VE~D~~v~a 123 (124)
T 2qtw_A 114 YIEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEEE
T ss_pred EEEeCceEec
Confidence 9999987753
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.63 E-value=1.5e-07 Score=90.54 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=74.4
Q ss_pred CCCccCCCCCCCCc-------ccceEEEEeeCCC-cchhhhhhhHhhcCceEEEEecCCCCCcc--cc--ccCccccEEE
Q 042259 376 SAAFCLPETLKSID-------VKGKVVLCQRGGG-TQRIRKGKDVKDAGGAAMILMNDELFDYG--TV--ADNHVLPAVY 443 (745)
Q Consensus 376 ~~~~c~~~~~~~~~-------~~g~ivl~~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~--~~--~~~~~~p~~~ 443 (745)
...+|.+....... .++||+|+ +||. |.|.+|..+++++||.++|+||+...+.. .. .....||+++
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV-~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~ 160 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALI-QRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIM 160 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEE-ESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEE-ECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEE
Confidence 46789877653322 47899999 9999 99999999999999999999998533221 11 2235799999
Q ss_pred EchHhHHHHHHHHhcCCCCeEEEEecc
Q 042259 444 VSYAAGERIKAYINSTSSPTASIVFKG 470 (745)
Q Consensus 444 i~~~~g~~l~~~~~~~~~~~~~i~~~~ 470 (745)
|+..+|+.|++.+..+...+++|++..
T Consensus 161 Is~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 161 IGNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp ECHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred ECHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 999999999999999887777776654
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.62 E-value=4.1e-08 Score=80.20 Aligned_cols=70 Identities=14% Similarity=0.198 Sum_probs=55.0
Q ss_pred ceEEEEeCCCCCCCCccccccHHHHHHhhcccccccccccccccceEEEec-ceeeEEEEEeCHHHHHHhhcC--CCeEE
Q 042259 33 QTYIVHVRKPKQEGNFSIKLDLDNWYRTFLPDNISKSIDAHHRSRMVYGYR-NVISGFAARLTAEEVKAMETK--SGFIS 109 (745)
Q Consensus 33 ~~yIV~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~y~-~~~~g~s~~l~~~~~~~L~~~--p~V~~ 109 (745)
+.|||.||++..... ...+.+++.+ .+.++.+.|+ ..|+||+++++++.+++|+++ |.|.+
T Consensus 3 ~sYIV~lk~~~~~~~---~~~~~~~~~~-------------~gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~ 66 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDK---IRETKDEVIA-------------EGGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDS 66 (76)
T ss_dssp EEEEEEECTTCCHHH---HHHHHHHHHH-------------HTCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEE
T ss_pred ceEEEEECCCCCHHH---HHHHHHHHHh-------------hCCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcE
Confidence 789999998875333 3334444332 2457889994 799999999999999999999 89999
Q ss_pred EEEccccCC
Q 042259 110 ARVENILEP 118 (745)
Q Consensus 110 v~~~~~~~~ 118 (745)
||+++.++.
T Consensus 67 VE~D~~v~~ 75 (76)
T 1v5i_B 67 IEEDHVAHA 75 (76)
T ss_dssp EEECCEEEC
T ss_pred EcCCcEEeC
Confidence 999987753
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.59 E-value=8.1e-05 Score=58.43 Aligned_cols=44 Identities=14% Similarity=0.285 Sum_probs=40.3
Q ss_pred ccccceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEEccccC
Q 042259 73 HHRSRMVYGYRNVISGFAARLTAEEVKAMETKSGFISARVENILE 117 (745)
Q Consensus 73 ~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~ 117 (745)
..+.++.++|. .+++++++|+++.++.|+++|+|++||+|...+
T Consensus 20 ~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 20 GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 45889999997 899999999999999999999999999998664
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.31 E-value=0.016 Score=51.54 Aligned_cols=74 Identities=15% Similarity=0.194 Sum_probs=56.9
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEEEEE-cCceEEE
Q 042259 659 SSPQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYLSWV-SATHTVR 737 (745)
Q Consensus 659 ~~~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~~-~~~~~v~ 737 (745)
+...+.+++|+|.|+.+..|++....| .+++|....+.+ |+++.++|+|.+... ..+.+.|.+. ++...+.
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L~p-g~~~~i~V~F~P~~~---g~~~~~l~v~~~~g~~~~ 111 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTLNV-GESMQLEVEFEPQSV---GDHSGRLIVCYDTGEKVF 111 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEECT-TCEEEEEEEECCSSS---BCCCCBCEEEESSSCEEC
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEECC-CCEEEEEEEEEcCCC---ccEEEEEEEEECCCCEEE
Confidence 347888899999999988888775432 567899999988 999999999999864 4566777766 5555555
Q ss_pred eeE
Q 042259 738 SPI 740 (745)
Q Consensus 738 ~P~ 740 (745)
+++
T Consensus 112 v~L 114 (122)
T 2ys4_A 112 VSL 114 (122)
T ss_dssp CEE
T ss_pred EEE
Confidence 543
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.16 E-value=0.024 Score=61.94 Aligned_cols=72 Identities=22% Similarity=0.356 Sum_probs=58.7
Q ss_pred CCCCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCCcc-cc--ccCccccEEEEchHhHHHHHHHHh
Q 042259 385 LKSIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFDYG-TV--ADNHVLPAVYVSYAAGERIKAYIN 457 (745)
Q Consensus 385 ~~~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~-~~--~~~~~~p~~~i~~~~g~~l~~~~~ 457 (745)
+...+++|||+|+ .||.|.|.+|..+++++||.|+|++++...... .. .....+|.+.++..+++.|+.++.
T Consensus 108 ~~~~dv~GkIvlv-~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 108 VAGKDLNGKIALI-QRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTSCCTTSEEEE-ECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCCCCcCceEEEE-eCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 3345899999999 999999999999999999999999998532111 11 134678999999999999999984
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.47 E-value=0.056 Score=59.36 Aligned_cols=102 Identities=10% Similarity=0.053 Sum_probs=69.7
Q ss_pred CCceeeEecCCCCCCCCccCCCCCCCCcccceEEEEeeCCCcc---------hhhh----hhhHhhcCceEEEEecCCCC
Q 042259 362 SKQLPLVYPGVKNSSAAFCLPETLKSIDVKGKVVLCQRGGGTQ---------RIRK----GKDVKDAGGAAMILMNDELF 428 (745)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~~~ 428 (745)
+..-++++..+. ..|.. ..+.+++|||||+ .|+.|. +..| ..++.++||+|+|++++...
T Consensus 105 ~vta~lV~v~~~----~~~~~--~~~~dvkGKIVlv-~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~ 177 (444)
T 3iib_A 105 GLSATIVRFDTL----QDLQN--AEAGSLNDKIAFI-DAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTD 177 (444)
T ss_dssp CEEEEEEEESSH----HHHHT--SCTTTTTTCEEEE-CCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSC
T ss_pred CeEEEEEecCCH----HHHhh--ccccccCccEEEE-eCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCc
Confidence 345677776421 22322 2356899999999 998874 3344 35689999999999987432
Q ss_pred Cc-------cc-cccCccccEEEEchHhHHHHHHHHhcCCCCeEEEEecc
Q 042259 429 DY-------GT-VADNHVLPAVYVSYAAGERIKAYINSTSSPTASIVFKG 470 (745)
Q Consensus 429 ~~-------~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 470 (745)
.. .. ......+|++.|+..+++.|+..+..+...++++....
T Consensus 178 ~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 178 HDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred ccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 21 11 11245799999999999999999987766666665443
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.20 E-value=0.031 Score=63.95 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=55.4
Q ss_pred CcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCCC-c-----------------ccc----------------
Q 042259 388 IDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELFD-Y-----------------GTV---------------- 433 (745)
Q Consensus 388 ~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~-~-----------------~~~---------------- 433 (745)
.+++|||||+ .+|.|.+.+|..++.++||.|+|++++.... . ...
T Consensus 128 vdv~GkIvlv-~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~ 206 (640)
T 3kas_A 128 TPVNGSIVIV-RAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRS 206 (640)
T ss_dssp SCCTTSEEEE-ESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSS
T ss_pred cccCCcEEEE-ecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCcccccccccccccc
Confidence 4799999999 9999999999999999999999999875321 0 000
Q ss_pred ccCccccEEEEchHhHHHHHHHHh
Q 042259 434 ADNHVLPAVYVSYAAGERIKAYIN 457 (745)
Q Consensus 434 ~~~~~~p~~~i~~~~g~~l~~~~~ 457 (745)
.....||+..|+..++..|+..+.
T Consensus 207 ~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 207 SGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cCCCCCCEEecCHHHHHHHHHHcc
Confidence 012368999999999999988764
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.53 E-value=0.044 Score=63.38 Aligned_cols=71 Identities=27% Similarity=0.350 Sum_probs=56.8
Q ss_pred CCcccceEEEEeeCCCcchhhhhhhHhhcCceEEEEecCCCC----C------------------cc----cccc-----
Q 042259 387 SIDVKGKVVLCQRGGGTQRIRKGKDVKDAGGAAMILMNDELF----D------------------YG----TVAD----- 435 (745)
Q Consensus 387 ~~~~~g~ivl~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~----~------------------~~----~~~~----- 435 (745)
..+++|||+|+ ++|.|.+.+|..++.++||+|+|+|++... + .. ..++
T Consensus 150 ~~~v~GkIvlv-~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG 228 (707)
T 3fed_A 150 GINCTGKIVIA-RYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPG 228 (707)
T ss_dssp CCCCTTCEEEE-ECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTT
T ss_pred CCCCCCeEEEE-ECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCC
Confidence 45799999999 999999999999999999999999986320 0 00 0011
Q ss_pred -----------------CccccEEEEchHhHHHHHHHHhc
Q 042259 436 -----------------NHVLPAVYVSYAAGERIKAYINS 458 (745)
Q Consensus 436 -----------------~~~~p~~~i~~~~g~~l~~~~~~ 458 (745)
...||++.|+..++..|+..+..
T Consensus 229 ~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 229 YPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp SCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 24789999999999999998764
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=89.74 E-value=2 Score=38.75 Aligned_cols=83 Identities=12% Similarity=0.078 Sum_probs=62.5
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECC----CCeEEEEEcCeEEEeeCCceEEEEEEEEeccC------CCCCeEEEEEEEE
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVP----EGVKIIVQPDKISFTEKNQKATFSVTFIRDQN------SNASSVQGYLSWV 730 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~----~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~------~~~~~~~G~~~~~ 730 (745)
..+-+++|+|.|.-+.+|++..... ..--++++|..-++.| |++.+++|++..+.. .....++--|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~P-ge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEP-NETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECT-TCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCC-CCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 5677899999999999999974321 1123667899999988 999999999997442 1113456678887
Q ss_pred -cCceEEEeeEEEEe
Q 042259 731 -SATHTVRSPIAIGF 744 (745)
Q Consensus 731 -~~~~~v~~P~~~~~ 744 (745)
.++....+|+-..|
T Consensus 123 Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 123 LDRGKDYFLTISGNY 137 (140)
T ss_dssp ETTSCEEEEEEEEEE
T ss_pred eecCCcEEEEEeccc
Confidence 78888999987765
No 50
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.93 E-value=0.87 Score=39.12 Aligned_cols=68 Identities=10% Similarity=0.124 Sum_probs=50.4
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEEC-CCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEEEEE
Q 042259 659 SSPQTYNRTVTNVGQDNSFYTHHIIV-PEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYLSWV 730 (745)
Q Consensus 659 ~~~~~~~~tv~n~~~~~~ty~~~~~~-~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~~ 730 (745)
+...+.+++++|.|+.+..|++.... +.+...+++|..-.+.+ |++++++|+|.+... ..+.=.|++.
T Consensus 25 g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~p-g~~~~i~V~f~~~~~---g~f~~~i~v~ 93 (112)
T 2e6j_A 25 GSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEP-SGVQAIQISFSSIIL---GNFEEEFLVN 93 (112)
T ss_dssp SCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECT-TBCCEEEEEECCCCC---EEEEEEECEE
T ss_pred CCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECC-CCEEEEEEEEECCCc---ceEEEEEEEE
Confidence 34688889999999999999883211 11234677899999988 999999999999753 2344556666
No 51
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=87.40 E-value=0.26 Score=60.15 Aligned_cols=25 Identities=24% Similarity=0.500 Sum_probs=23.2
Q ss_pred CCCCCCccEEEEecCCCCCCCCCCC
Q 042259 138 DSNLGKGVIIGVLDMGITPGHPSFS 162 (745)
Q Consensus 138 ~~~~G~gv~VaVIDtGid~~Hp~f~ 162 (745)
..+.|+||+|||+|||||+.+|.|.
T Consensus 31 P~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 31 PEYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TTCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCCccEEEEEeCCCCCCCCcce
Confidence 3578999999999999999999997
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=86.85 E-value=2.6 Score=36.70 Aligned_cols=55 Identities=16% Similarity=0.163 Sum_probs=45.4
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccC
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQN 717 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~ 717 (745)
...+++.|.|....+.+|.+++....++.+. .+..+.+++ |+..++.|.+..+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~~-g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVEP-GEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEECT-TCEEEEEEEEEECGG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEECC-CCEEEEEEEEEEChH
Confidence 5788899999999999999999987776543 355688877 999999999988764
No 53
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=86.54 E-value=0.43 Score=52.21 Aligned_cols=31 Identities=32% Similarity=0.453 Sum_probs=26.8
Q ss_pred CCCCceecccCCCCCCCCCCCccCceEeCCccEEeccCC
Q 042259 476 KSAPEVAVFSSRGPNTASPGILKPDIIGPGVSILAAWPF 514 (745)
Q Consensus 476 ~~~~~~a~fSS~GP~~~~~g~~KPDi~APG~~I~sa~~~ 514 (745)
...+.++.||++||.. ||+|||++|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 4456899999999866 999999999999875
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=76.82 E-value=11 Score=36.61 Aligned_cols=66 Identities=9% Similarity=0.045 Sum_probs=48.3
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEEEEE
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYLSWV 730 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~~ 730 (745)
..+.+++++|.|+.+.+++... .|...++. +..-.+.+ |++.+++|++.......-....+.|++.
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~--~~~~~I~P-G~~g~I~vt~~~~~~~~~G~~~~~i~v~ 85 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVS-LPSFVSLD--DRAFRLQA-REPRELNLSLAVPRNMPPGMKDEPLVLE 85 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEE-CCTTEECS--CCEEEECS-SSCEEEEEEECCCTTCCSEEEEEEEEEE
T ss_pred cceEEEEEEeCCCCceEEEecc-CCCceEee--eCcceeCC-CCceEEEEEEcchhcccCCceeeEEEEE
Confidence 5667899999999988888653 36665554 33345566 9999999999887764335667778876
No 55
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=76.52 E-value=11 Score=39.65 Aligned_cols=83 Identities=12% Similarity=0.108 Sum_probs=61.1
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECCCCe----EEEEEcCeEEEeeCCceEEEEEEEEeccCC------CCCeEEEEEEEE
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVPEGV----KIIVQPDKISFTEKNQKATFSVTFIRDQNS------NASSVQGYLSWV 730 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~~g~----~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~------~~~~~~G~~~~~ 730 (745)
..+-++||+|.|..+.+|++.-...... -++++|..-++.+ |++.+++|++..+... .....+--|++.
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~P-ge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL~ 125 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEP-NETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 125 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECT-TCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEEE
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECC-CCEEEEEEEEEECHHHHHHHhcCccccceEEEEE
Confidence 6778899999999999999865433221 1678899999988 9999999999887621 113455667777
Q ss_pred -cCceEEEeeEEEEe
Q 042259 731 -SATHTVRSPIAIGF 744 (745)
Q Consensus 731 -~~~~~v~~P~~~~~ 744 (745)
.+++...+|+-..|
T Consensus 126 ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 126 LDRGKDYFLTISGNY 140 (366)
T ss_dssp ETTSCEEEEEEEEEE
T ss_pred EeCCCcEEEEecccc
Confidence 67777777776654
No 56
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=69.08 E-value=15 Score=42.45 Aligned_cols=56 Identities=20% Similarity=0.177 Sum_probs=37.7
Q ss_pred cEEEEEEEEecCCCCeeEEEEE--ECCCC-----eEEEEEcCeEEEeeCCceEEEEEEEEeccC
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHI--IVPEG-----VKIIVQPDKISFTEKNQKATFSVTFIRDQN 717 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~--~~~~g-----~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~ 717 (745)
..+++++|||.|+......+++ ..|.+ .+.-.-=.++.+.+ ||+++++++++..+.
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~p-Ges~~V~~~l~~~~l 676 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLTP-GQSGTATFNIRRRDL 676 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEECT-TCEEEEEEEEEGGGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeCC-CCeEEEEEEEcHHHe
Confidence 5789999999999887777665 44432 11111222344656 999999999988653
No 57
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=68.02 E-value=24 Score=30.96 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=37.2
Q ss_pred CccEEEEEEEEecCCCC-eeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEec
Q 042259 659 SSPQTYNRTVTNVGQDN-SFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRD 715 (745)
Q Consensus 659 ~~~~~~~~tv~n~~~~~-~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 715 (745)
+...+++.+|+|.|... ..|++.+-. .|-.+.-. ...+.+ |+++++++++.+.
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~La~-G~s~tv~f~~~~~ 85 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSLGP-KEEKVLTFNWTPT 85 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEECT-TCEEEEEEEECCS
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--EeccCC-CCeEEEEEEEEcC
Confidence 44799999999999864 567777654 45444332 345666 9999988888753
No 58
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=61.04 E-value=32 Score=29.25 Aligned_cols=50 Identities=8% Similarity=0.046 Sum_probs=41.4
Q ss_pred EEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEec
Q 042259 663 TYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRD 715 (745)
Q Consensus 663 ~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 715 (745)
+.+.+|+|.++....|++....|.-+. |.|..=.+.+ |++.++.|+..+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I~P-~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFVDP-SGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEECT-TEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEECC-CCeEEEEEEeCCC
Confidence 567899999999999999988887654 5788766666 9999999998874
No 59
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=59.94 E-value=36 Score=29.26 Aligned_cols=51 Identities=10% Similarity=0.079 Sum_probs=41.8
Q ss_pred EEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEec
Q 042259 662 QTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRD 715 (745)
Q Consensus 662 ~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 715 (745)
.+.+++|+|.++....|++....|.-+. |.|..=.+.+ |++.++.|+..+.
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~Yr--VrP~~G~I~P-g~~~~I~I~~q~~ 75 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEHYR--VRPVYGFVDA-KGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTTEE--EECSEEEECT-TCEEEEEEEECSC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCceE--EcCCceEECC-CCeEEEEEEeCCC
Confidence 4677999999999999999888887654 5788666666 9999999999875
No 60
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=56.37 E-value=46 Score=28.79 Aligned_cols=69 Identities=9% Similarity=0.082 Sum_probs=41.0
Q ss_pred CccEEEEEEEEecCCCCee--------EEEEEECCCCeEEEE---------EcCeEEEeeCCceEEEEEEEEeccCCCCC
Q 042259 659 SSPQTYNRTVTNVGQDNSF--------YTHHIIVPEGVKIIV---------QPDKISFTEKNQKATFSVTFIRDQNSNAS 721 (745)
Q Consensus 659 ~~~~~~~~tv~n~~~~~~t--------y~~~~~~~~g~~v~v---------~p~~~~~~~~g~~~~~~v~~~~~~~~~~~ 721 (745)
++...++++|+|.++.+.+ |.+.+....|-.|.- -....++.+ ||+++|+.++...-.+..-
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~p-GE~~~f~~~w~~~~~pG~Y 95 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLES-GETYDFSDVWKEVPEPGTY 95 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECT-TCEEEEEEEESSCCCSEEE
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECC-CCEEEEEEEeCCCCCCccE
Confidence 4478899999999986544 344444445544430 112345666 9999999999842222223
Q ss_pred eEEEEEE
Q 042259 722 SVQGYLS 728 (745)
Q Consensus 722 ~~~G~~~ 728 (745)
.+.++++
T Consensus 96 tl~a~l~ 102 (120)
T 3isy_A 96 EVKVTFK 102 (120)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 4455544
No 61
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=56.10 E-value=26 Score=30.66 Aligned_cols=52 Identities=17% Similarity=0.137 Sum_probs=43.7
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEec
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRD 715 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 715 (745)
.++-.++|+|.++...-|++....|.-+ .|.|..=.+.+ |++..+.|++.+.
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~y--~VrP~~G~i~P-~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGVIDP-GSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGGE--EEESCEEEECT-TCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCce--EEeCCCcEECC-CCeEEEEEEECcC
Confidence 5777899999999999999998888654 46788777777 9999999999874
No 62
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=55.39 E-value=33 Score=29.91 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=43.5
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEec
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRD 715 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 715 (745)
.++-.++|+|.++...-|++....|.-+ .|.|..=.+.+ |++..+.|++.+-
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii~P-~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVLDP-KEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEECT-TCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEECC-CCEEEEEEEecCC
Confidence 4566799999999999999999888765 56788877877 9999999998883
No 63
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=53.25 E-value=13 Score=43.01 Aligned_cols=57 Identities=9% Similarity=0.093 Sum_probs=36.3
Q ss_pred ccEEEEEEEEecCCCCeeEEEEE--ECCCC-----eEEEEEcCeE-EEeeCCceEEEEEEEEeccC
Q 042259 660 SPQTYNRTVTNVGQDNSFYTHHI--IVPEG-----VKIIVQPDKI-SFTEKNQKATFSVTFIRDQN 717 (745)
Q Consensus 660 ~~~~~~~tv~n~~~~~~ty~~~~--~~~~g-----~~v~v~p~~~-~~~~~g~~~~~~v~~~~~~~ 717 (745)
...+++++|||.|+......+++ ..|.+ ++.-.-=.++ .+.+ ||+++++++++..+.
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~p-Ges~~V~~~l~~~~l 679 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNP-GESEEVVLEIPVRDL 679 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCT-TCEEEEEEEEEGGGG
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCC-CCeEEEEEEECHHHh
Confidence 46889999999999876666654 44422 1111111223 3445 999999999988653
No 64
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=52.60 E-value=72 Score=35.62 Aligned_cols=79 Identities=11% Similarity=0.020 Sum_probs=49.8
Q ss_pred CCCceeeecCCccEEEEEEEEecCCCCeeE-EEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEE
Q 042259 649 NYPSFSVKLGSSPQTYNRTVTNVGQDNSFY-THHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYL 727 (745)
Q Consensus 649 n~ps~~~~~~~~~~~~~~tv~n~~~~~~ty-~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~ 727 (745)
..|.+++.-+ .+.+++.+|+|-+.....- ++++..|.+..++. ....+.+ |++.+++++|+.+.......|.=-+
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~t~~~~vt~~~~~~~g~y~l~~ 438 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLMP-GRQAKGQVTITVPAGTTPGRYRVGA 438 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBCT-TCEEEEEEEEECCTTCCCEEEEEEE
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccCC-CCceEEEEEEecCCCCCCCcEEeeE
Confidence 3466665544 4788999999976543222 44466688888776 2344555 9999998899987643323443334
Q ss_pred EEEc
Q 042259 728 SWVS 731 (745)
Q Consensus 728 ~~~~ 731 (745)
.+..
T Consensus 439 ~~~~ 442 (601)
T 1w8o_A 439 TLRT 442 (601)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5554
No 65
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=50.81 E-value=33 Score=31.06 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=43.8
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEecc
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQ 716 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~ 716 (745)
.++-.++|+|.++...-|++....|.-+. |.|..=.+.+ |++.+++|++.+..
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI~P-~~s~~V~V~lq~~~ 88 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEKYR--VKPSNSSCDP-GASIDIIVSPHGGL 88 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTTEE--EESSEEEECT-TCEEEEEEEECSSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCcee--ecCCCcEECC-CCeEEEEEEecCcc
Confidence 34667999999999999999998887554 5788877777 99999999998753
No 66
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=48.78 E-value=46 Score=39.14 Aligned_cols=44 Identities=20% Similarity=0.157 Sum_probs=31.5
Q ss_pred ceeeeccccchhHHHHHHHHHHHhhCCCCC-HHHHHHHHhccccc
Q 042259 525 TFTMISGTSMSCPHLSGIAALLKSAHPDWS-PAAIKSAIMTTADI 568 (745)
Q Consensus 525 ~y~~~sGTSmAaP~VAG~aALl~q~~p~~s-~~~ik~~L~~TA~~ 568 (745)
-...++|..++-|.+.-+.|+|...+|..- ...|-++|.--..+
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNP 662 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVP 662 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence 345677888887887777888888888665 56777777665544
No 67
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=46.77 E-value=34 Score=30.76 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=43.4
Q ss_pred cEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEec
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRD 715 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 715 (745)
.++-.++|+|.++...-|++....|.-+. |.|..=.+.+ +++..+.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI~P-~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGIIDP-GSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSEE--EESSEEECCT-TCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccEE--EcCCCcEECC-CCeEEEEEEECCC
Confidence 45667999999999999999998887654 5788777767 9999999999874
No 68
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=45.56 E-value=68 Score=26.53 Aligned_cols=16 Identities=25% Similarity=0.231 Sum_probs=13.2
Q ss_pred ccEEEEEEEEecCCCC
Q 042259 660 SPQTYNRTVTNVGQDN 675 (745)
Q Consensus 660 ~~~~~~~tv~n~~~~~ 675 (745)
+..+++++|+|.|+.+
T Consensus 18 gr~~~~l~V~NtGDRP 33 (101)
T 4ep8_B 18 GRATCRVVVENHGDRP 33 (101)
T ss_dssp TCCEEEEEEEECSSSC
T ss_pred CCCEEEEEEEeCCCcc
Confidence 4568889999999976
No 69
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=44.90 E-value=7.3 Score=33.80 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=37.2
Q ss_pred cEEEEEEEEecCCCCeeEEEEEE-CCCCeEEEEEcCeEEEee-CCceEEEEEEEEecc
Q 042259 661 PQTYNRTVTNVGQDNSFYTHHII-VPEGVKIIVQPDKISFTE-KNQKATFSVTFIRDQ 716 (745)
Q Consensus 661 ~~~~~~tv~n~~~~~~ty~~~~~-~~~g~~v~v~p~~~~~~~-~g~~~~~~v~~~~~~ 716 (745)
...+..-|+|.+.+..+..+.++ .|.|+.++++|..+++.- .-.+++|.|++....
T Consensus 54 ~i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 54 SYEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp CCEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred CEEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 34555666777655545556666 789999999999877663 244666666665543
No 70
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=42.72 E-value=58 Score=31.26 Aligned_cols=68 Identities=9% Similarity=0.091 Sum_probs=43.2
Q ss_pred ccEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCe--EEEEEEEE
Q 042259 660 SPQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASS--VQGYLSWV 730 (745)
Q Consensus 660 ~~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~--~~G~~~~~ 730 (745)
...+.+++++|.|+.+...+ .++..-|..+ ++...-.+.+ ||+.++.|++.+...+...| ....|++.
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~scgct~-~~~~~~~i~P-Ge~~~i~v~~~~~~~~g~~~~~~~~~i~v~ 203 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTRNPALT-AVPDRTEIKP-GGSTLLRIAVDPQVMKAEGWQSIAADISII 203 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEECSTTEE-EEESCSEECT-TCEEEEEEEECHHHHHHTTCSEEEEEEEEE
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeCCCCEe-eecCCccCCC-CCEEEEEEEEecCCCCCcccceeccEEEEE
Confidence 46888999999999876654 2333333322 2333345556 99999999999865422112 55677666
No 71
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=42.01 E-value=16 Score=27.31 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=27.7
Q ss_pred cchhHHHHHHHHHHHhhCCCCCHHHHHHHHhcccccc
Q 042259 533 SMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADIV 569 (745)
Q Consensus 533 SmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~ 569 (745)
|-..|..--....|++.||+++...|+..|...-..+
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 3333444456678999999999999999998865544
No 72
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=40.66 E-value=74 Score=27.44 Aligned_cols=17 Identities=18% Similarity=0.264 Sum_probs=13.6
Q ss_pred CccEEEEEEEEecCCCC
Q 042259 659 SSPQTYNRTVTNVGQDN 675 (745)
Q Consensus 659 ~~~~~~~~tv~n~~~~~ 675 (745)
.+..+++++|+|.|+.+
T Consensus 23 ~gr~~~~l~V~NtGDRP 39 (126)
T 4ubp_B 23 AGREKTTIRVSNTGDRP 39 (126)
T ss_dssp TTSCEEEEEEEECSSSC
T ss_pred CCCcEEEEEEEeCCCCC
Confidence 34567889999999976
No 73
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=40.66 E-value=74 Score=27.44 Aligned_cols=17 Identities=18% Similarity=0.264 Sum_probs=13.6
Q ss_pred CccEEEEEEEEecCCCC
Q 042259 659 SSPQTYNRTVTNVGQDN 675 (745)
Q Consensus 659 ~~~~~~~~tv~n~~~~~ 675 (745)
.+..+++++|+|.|+.+
T Consensus 23 ~gr~~~~l~V~NtGDRP 39 (126)
T 4ac7_B 23 AGREKTTIRVSNTGDRP 39 (126)
T ss_dssp TTSCEEEEEEEECSSSC
T ss_pred CCCcEEEEEEEeCCCCC
Confidence 34567889999999976
No 74
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=33.22 E-value=2.1e+02 Score=23.79 Aligned_cols=66 Identities=14% Similarity=0.237 Sum_probs=46.6
Q ss_pred ceeeecCCccEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEEEE
Q 042259 652 SFSVKLGSSPQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYLSW 729 (745)
Q Consensus 652 s~~~~~~~~~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~ 729 (745)
.+++.|......++++|+|...+...|.=.+..|. .+++ .+.. .++-++.|.+.... .++.|...+
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~--~i~I-----dLng-e~sG~Y~IeI~~~~----~~LtG~F~i 100 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTS--IVMI-----DMSS-CEKGEYTIHIILND----CLLEGTFTV 100 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCS--EEEE-----ECTT-SCSEEEEEEEEETT----EEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCc--EEEE-----EcCC-CcCceEEEEEEeCC----cEEEEEEEe
Confidence 56677777677888999998888889987776654 3333 2332 44788888888865 577887654
No 75
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=28.58 E-value=3e+02 Score=26.95 Aligned_cols=59 Identities=14% Similarity=0.112 Sum_probs=40.9
Q ss_pred CCccEEEEEEEEecCCCCeeEEEEE--ECCC--------CeEEEEEcCeEEEeeCCceEEEEEEEEeccCCC
Q 042259 658 GSSPQTYNRTVTNVGQDNSFYTHHI--IVPE--------GVKIIVQPDKISFTEKNQKATFSVTFIRDQNSN 719 (745)
Q Consensus 658 ~~~~~~~~~tv~n~~~~~~ty~~~~--~~~~--------g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~ 719 (745)
..+....+++|+|.++. .|-+++ +... ..-+.++|..+.+.+ |+++.+.|..+....+.
T Consensus 40 ~~~~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~p-g~~q~lRI~~~~~~LP~ 108 (257)
T 3q48_A 40 PASEREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEP-NGGAVLRIAYLKAPLPT 108 (257)
T ss_dssp ETTCSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECT-TEEEEEEEEECCCCCCS
T ss_pred eCCCcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECC-CCceEEEEEECCCCCCC
Confidence 33456788999998865 565553 3211 234788999999988 99999998776654333
No 76
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=24.42 E-value=53 Score=29.79 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.3
Q ss_pred eeccccchhHHHHHHHHHHHhhCCCCCHHHHHHH
Q 042259 528 MISGTSMSCPHLSGIAALLKSAHPDWSPAAIKSA 561 (745)
Q Consensus 528 ~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~ 561 (745)
.+.|-| =|+.|-|.+||+++.+-..+|++|.+.
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 344555 479999999999999999999998753
No 77
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=22.13 E-value=3.5e+02 Score=22.68 Aligned_cols=69 Identities=12% Similarity=0.235 Sum_probs=48.5
Q ss_pred ceeeecCCccEEEEEEEEecCCCCeeEEEEEECCCCeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCCCeEEEEEEE
Q 042259 652 SFSVKLGSSPQTYNRTVTNVGQDNSFYTHHIIVPEGVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNASSVQGYLSW 729 (745)
Q Consensus 652 s~~~~~~~~~~~~~~tv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~~~~ 729 (745)
.+.+.|...-..++++|+|...+...|.=.+..+.+-.+.++= .. -.+-.+.+.++.... .++.|...+
T Consensus 39 ~L~I~F~~~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L-----~~-~~~G~Y~L~i~~~~~---~~l~G~F~i 107 (108)
T 3d33_A 39 LLTLKNASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITISI-----AN-FPAEEYKLEITGTPS---GHLTGYFTK 107 (108)
T ss_dssp EEEEEESSCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEEC-----TT-SCSEEEEEEEEEESS---CEEEEEEEE
T ss_pred EEEEEECCcCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEc-----CC-ccCceEEEEEEeCCC---CEEEEEEEe
Confidence 4567777667888999998887888999888777655555432 21 236788888887632 688887654
No 78
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=20.94 E-value=4.6e+02 Score=24.93 Aligned_cols=58 Identities=9% Similarity=0.015 Sum_probs=39.5
Q ss_pred ccEEEEEEEEecCCCCeeEEEEE--ECC---C--CeEEEEEcCeEEEeeCCceEEEEEEEEeccCCCC
Q 042259 660 SPQTYNRTVTNVGQDNSFYTHHI--IVP---E--GVKIIVQPDKISFTEKNQKATFSVTFIRDQNSNA 720 (745)
Q Consensus 660 ~~~~~~~tv~n~~~~~~ty~~~~--~~~---~--g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~ 720 (745)
+...++++|+|.++. .|-++. ... . ..-+-++|..+.+.+ |+++.+.|..+....+.+
T Consensus 26 ~~k~~sl~l~N~~~~--p~LvQswv~~~~~~~~~~~pFivtPPl~Rl~p-~~~q~lRI~~~~~~LP~D 90 (218)
T 4ay0_A 26 DAAGVMVSVKNTQDY--PVLIQSRIYDENKEKESEDPFVVTPPLFRLDA-KQQNSLRIAQAGGVFPRD 90 (218)
T ss_dssp TCSCEEEEEECCSSS--CEEEEEEEECTTSCCCSSCSEEEESSEEEECT-TCEEEEEEEECSCCCCSS
T ss_pred CCcEEEEEEEcCCCC--CEEEEEEEecCCCCccccCCEEECCCeEEeCC-CCceEEEEEecCCCCCcC
Confidence 346777999998765 465543 221 1 123678999999988 999999988776554443
No 79
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=20.55 E-value=51 Score=29.38 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=27.8
Q ss_pred eeeccccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 042259 527 TMISGTSMSCPHLSGIAALLKSAHPDWSPAAIKS 560 (745)
Q Consensus 527 ~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~ 560 (745)
..+.|-| =|+.|-|.+||+.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4555666 47999999999999999999999865
Done!