BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042263
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKD9|SINL6_ARATH Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis
thaliana GN=At5g37870 PE=3 SV=1
Length = 281
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 10 TSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCV-MLRSRVMD 68
++ ++D D+ DCPI YQALK+PV Q NGH+ CSSC K+ NKCPAC V +R R M+
Sbjct: 34 SAMLTDLDILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAME 93
Query: 69 IALE--------------KTMSFGENKDHERNCQCAPCACPLLDCNFLGSASQLYLYF-- 112
LE KT+ +G HE+ C +PC+CP+ CN+ GS LY ++
Sbjct: 94 RVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDL 153
Query: 113 SWKNGKTFVSFTYKKRVKVTLNVNDSVFLFRQQKNGHLFSLK 154
+ G T SF + + ++D + + R + LF ++
Sbjct: 154 THSTGSTAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQ 195
>sp|Q9FKD7|SINL7_ARATH E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana
GN=At5g37890 PE=2 SV=1
Length = 286
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 TSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVML-RSRVMD 68
++ + D ++ DCPI Y+A +P+ Q NGH+ CSSC K+NNKCPAC S V R R M+
Sbjct: 40 STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAME 99
Query: 69 IALE--------------KTMSFGENKDHERNCQCAPCACPLLDCNFLGSASQLYLYFSW 114
LE K +S+G+ HE+ C + CACP LDCN+ S LY ++
Sbjct: 100 SVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRI 159
Query: 115 KNGKT--FVSFTYKKRVKVTLNVNDSVFLFRQQKNGHLFSLK 154
+ + +F + V +N++ + + + HLF+++
Sbjct: 160 THMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQ 201
>sp|Q84K34|SIL10_ARATH E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana
GN=At5g37930 PE=2 SV=1
Length = 349
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 15/158 (9%)
Query: 12 TISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCV-MLRSRVMDIA 70
T+ D D+ DCPI + LK+P+ Q NGH+ C+ C KV N+CP+C + +R R M+
Sbjct: 104 TLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKV 163
Query: 71 LE--------------KTMSFGENKDHERNCQCAPCACPLLDCNFLGSASQLYLYFSWKN 116
+E ++ S+G HE+ C PC+CP+LDC++ G L + ++
Sbjct: 164 IEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEH 223
Query: 117 GKTFVSFTYKKRVKVTLNVNDSVFLFRQQKNGHLFSLK 154
+SF + R+ ++L++N + +++ +GH+ ++
Sbjct: 224 KDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQ 261
>sp|Q9C6H3|SINL2_ARATH E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana
GN=At1g66620 PE=2 SV=1
Length = 313
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 10 TSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVM-LRSRVMD 68
+ T+ + DL DCPI AL P+ Q NGHI CSSC K+ NKCP+C + RSR+M+
Sbjct: 33 SGTLFELDLLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIME 92
Query: 69 IALEKTM--------------SFGENKDHERNCQCAPCACPLLDCNFLGSASQLYLYFSW 114
+E M S+G+ HE++C+ A C CP +CN+ G LY +F
Sbjct: 93 RVVEAVMVTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYV 152
Query: 115 KNGKTFVSFTYKKRVKVTLNVNDSVFLFRQQKNGHLFSLK 154
+ T+ L +++ + + Q G L +++
Sbjct: 153 NHYDTWNQIGCGNFAGAWLRISEKILVL-QYGQGPLIAVQ 191
>sp|Q9FM14|SIL11_ARATH E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana
GN=At5g62800 PE=2 SV=2
Length = 314
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 22/171 (12%)
Query: 5 KNGSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPAC-------- 56
+N + ++ + D D+ DCP+ ++ L +P Q +GHI+C+ C AKV+NKCP
Sbjct: 27 ENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGN 86
Query: 57 RSCVMLRSRVMDIAL----------EKTMSFGENKDHERNCQCAPCACPLLDCNFLGSAS 106
+ C + RV++ A K++S+ + HE+ C + C+CP L+CN+ GS +
Sbjct: 87 KRCFAME-RVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYN 145
Query: 107 QLYLYFSWKN--GKTFVSFTYK-KRVKVTLNVNDSVFLFRQQKNGHLFSLK 154
+Y +F ++ T VS + V V +N+ + V + + + LF ++
Sbjct: 146 IIYGHFMRRHLYNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQ 196
>sp|Q9FKD5|SINL9_ARATH Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis
thaliana GN=At5g37910 PE=3 SV=1
Length = 276
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 15 DQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCV-MLRSRVMDIALE- 72
D D+ DCPI +AL P+ Q NGH+ C SC K++NKCPAC V RSR M+ LE
Sbjct: 32 DLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLES 91
Query: 73 -------------KTMSFGENKDHERNCQCAPCACPLLDCNFLGSASQLYLYFSWKNGKT 119
K+ +G+ HE+ C + C+CP C++ GS LY ++ +
Sbjct: 92 ILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHSTN 151
Query: 120 FVSFTYKKRVK------VTLNVNDSVFLFRQQKNGHLFSLK 154
F KR + ++ ++D + + R + L +++
Sbjct: 152 I--FWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQ 190
>sp|Q9FKD6|SINL8_ARATH E3 ubiquitin-protein ligase SINA-like 8 OS=Arabidopsis thaliana
GN=At5g37900 PE=1 SV=2
Length = 263
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 10 TSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMD- 68
++T+ D D+ DCPI + L P+ Q NGH+ CSSC K+ NKCPAC +L S ++
Sbjct: 24 SATLLDLDILDCPICCEGLTCPIFQCENGHLACSSCCPKLRNKCPACPMENILESILVTC 83
Query: 69 ----IALEKTMSFGENKDHERNCQCAPCACPLLDCNFLGSASQLYLYFSWKNGK----TF 120
++ +G+ HE C + C+CP LDC + G LY ++ + T
Sbjct: 84 PNDMFGCTESFLYGKKSTHEEECIFSLCSCPSLDCEYSGRYEDLYDHYKLTHISNSYWTT 143
Query: 121 VSFTYKKRVKVTLNVNDSVFLFRQQKNGHLFSLK 154
F K + ++D + + R + LF+++
Sbjct: 144 NCFRSSIPYKAPMLISDKIQITRVYEKKILFAVQ 177
>sp|Q9C9M0|SINL4_ARATH E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana
GN=At1g66650 PE=2 SV=1
Length = 329
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 25/183 (13%)
Query: 1 LRSCKNGSITS----TISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPAC 56
LR+C+ ++S T+ + ++ +CP + LK P+ Q NGH+ C C K+ +C C
Sbjct: 62 LRTCRKRRVSSPKSVTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFC 121
Query: 57 RSCVM-LRSRVMDIAL--------------EKTMSFGEN-KDHERNCQCAPCACPLLDCN 100
+ + +R R M+ + +++ ++G + HE+ C APC+CP+ DCN
Sbjct: 122 KLPIGDVRCRAMEKVIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCN 181
Query: 101 FLGSASQLYLYFSWKNGKT---FVSFTYKKRVKVTLNVN--DSVFLFRQQKNGHLFSLKN 155
++G L +F + + SF + + V L+++ D + +F ++K G+LF ++
Sbjct: 182 YIGFYKDLINHFRATHKVSPGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFVVQG 241
Query: 156 VVA 158
+
Sbjct: 242 FIG 244
>sp|Q9C6H2|SINL3_ARATH E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana
GN=At1g66630 PE=2 SV=1
Length = 303
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 10 TSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCV-MLRSRVMD 68
++T+ + DL DCPI Y L P+ Q NGHI CSSC KV KCP C + RSR+++
Sbjct: 38 SATLLELDLLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKYKCPYCSLRIGFFRSRILE 97
Query: 69 IALEKTM------SFG----------ENKDHERNCQCAPCACPLLDCNFLGSASQLYLYF 112
+E + +G HER C+ C CP +C + G + LY ++
Sbjct: 98 KIVEAVVVSCPNAKYGCTEKIPYDNESESAHERVCEFTLCYCPEPECKYTGVYTDLYRHY 157
>sp|Q7XA77|SINL5_ARATH E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana
GN=At1g66660 PE=2 SV=2
Length = 328
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 13 ISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVM-LRSRVMDIAL 71
+ D+ DCP + LK P+ Q NGH+ CSSC K+N KC CR + +R R M+ +
Sbjct: 78 LQSSDVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVI 137
Query: 72 E--------------KTMSFGENKDHERNCQCAPCACPLLDCNFLGSASQLYLY-----F 112
E +T ++ HE+ C+ C+CP+ +CN++ S S L +
Sbjct: 138 EASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPVSNCNYVSSYSNLKSHACSTAH 197
Query: 113 SWKNGKTFVSFTYKKRVKVTLNVN-DSVFLFRQQKNGHLFSLK 154
W + +N+ +F+++K G L ++
Sbjct: 198 VWGEDDIHFQLVIDRPRIFNMNLGRKKTVVFKEEKEGDLIVVQ 240
>sp|Q84JL3|SINA3_ARATH E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana
GN=SINAT3 PE=2 SV=1
Length = 326
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 6 NGSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRS------C 59
+G + +T S +L +CP+ ++ P+ Q NGH +CS+C A+V+N+CP CR C
Sbjct: 48 SGLLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRC 107
Query: 60 VMLRSRVMDIALE-KTMSFG--------ENKDHERNCQCAPCACP 95
+ L + L K MS G HE C P +CP
Sbjct: 108 LALEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCP 152
>sp|Q9C6H4|SINL1_ARATH E3 ubiquitin-protein ligase SINA-like 1 OS=Arabidopsis thaliana
GN=At1g66610 PE=2 SV=1
Length = 366
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 25/145 (17%)
Query: 10 TSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDI 69
+ T+S DL DCP+ +ALK+ + Q S LAK N C
Sbjct: 150 SGTLSQLDLLDCPVCSKALKISIFQQ-------SLFLAKRQNGC---------------- 186
Query: 70 ALEKTMSFGENKDHERNCQCAPCACPLLDCNFLGSASQLYLYFSWKNGKTFVSFTYKKRV 129
+T S+G HE+ C A C CP +CN+ G LY +++ + K + F+ +
Sbjct: 187 --TETFSYGNELVHEKKCSFALCYCPAPNCNYAGVYKDLYSHYAANHKKLWTRFSCGYSM 244
Query: 130 KVTLNVNDSVFLFRQQKNGHLFSLK 154
V ++ + +Q +G L L+
Sbjct: 245 HVCMDFESKSLVLQQYSDGPLVVLQ 269
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 10 TSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVM-LRSRVMD 68
+ T+ + DL DCPI AL +P+ Q GHI CSSC V+NKCP C + RSR+M+
Sbjct: 45 SGTLFELDLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIME 104
Query: 69 IALE 72
+E
Sbjct: 105 RVVE 108
>sp|Q8T3Y0|SINAL_DROME Probable E3 ubiquitin-protein ligase sinah OS=Drosophila
melanogaster GN=sinah PE=1 SV=2
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 35/144 (24%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEKT--- 74
L +CP+ + + P+ Q GH+ICS+C +K+ CP CR + + + +A+EK
Sbjct: 103 LLECPVCFGYIMPPIMQCPRGHLICSTCRSKL-TICPVCR---VFMTNIRSLAMEKVASK 158
Query: 75 ---------------MSFGENKDHERNCQCAPCACPLLD--CNFLGSASQLYLYFSWKNG 117
+S+ E HE +C+C P CP D C++ G +Y + +
Sbjct: 159 LIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHE 218
Query: 118 KTFVSFTYKKRVKVTLNVNDSVFL 141
+T+ ND +FL
Sbjct: 219 NV-----------ITMEGNDIIFL 231
>sp|Q86MW9|SINA_SCHMA E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA
PE=1 SV=1
Length = 371
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 35/157 (22%)
Query: 5 KNGSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRS 64
N S +S+I LF+CP+ P+ Q +GHI+C+SC +K+++ CP CR +
Sbjct: 110 HNTSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSKLSS-CPTCRGNL---D 165
Query: 65 RVMDIALEK------------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGS 104
+ ++A+EK T + +HE C+ P C CP C +LG
Sbjct: 166 NIRNLAMEKLASSVLFPCKYSTSGCPETFHYTSKSEHEAACEYRPYDCPCPGASCKWLGE 225
Query: 105 ASQLYLYFSWKNGKTFVSFTYKKRVKVTLNVNDSVFL 141
Q+ + + + TL D VFL
Sbjct: 226 LEQVMPH-----------LVHHHKSITTLQGEDIVFL 251
>sp|Q8I147|SINA_DROWI E3 ubiquitin-protein ligase sina OS=Drosophila willistoni GN=sina
PE=3 SV=1
Length = 331
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 24/106 (22%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEKTMS- 76
LF+CP+ + + P+ Q +GH++C SC +K+ CP CR + + + ++A+EK S
Sbjct: 87 LFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTC-CPTCRGPL---ANIRNLAMEKVASN 142
Query: 77 -----------------FGENKDHERNCQCAP--CACPLLDCNFLG 103
+ E +HE C+C P C CP C + G
Sbjct: 143 VKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQG 188
>sp|P21461|SINA_DROME E3 ubiquitin-protein ligase sina OS=Drosophila melanogaster GN=sina
PE=1 SV=2
Length = 314
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 24/106 (22%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEKTMS- 76
LF+CP+ + + P+ Q +GH++C SC +K+ CP CR + + + ++A+EK S
Sbjct: 70 LFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTC-CPTCRGPL---ANIRNLAMEKVASN 125
Query: 77 -----------------FGENKDHERNCQCAP--CACPLLDCNFLG 103
+ E +HE C+C P C CP C + G
Sbjct: 126 VKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQG 171
>sp|P61093|SINA_DROER E3 ubiquitin-protein ligase sina OS=Drosophila erecta GN=sina PE=3
SV=1
Length = 314
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 24/106 (22%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEKTMS- 76
LF+CP+ + + P+ Q +GH++C SC +K+ CP CR + + + ++A+EK S
Sbjct: 70 LFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTC-CPTCRGPL---ANIRNLAMEKVASN 125
Query: 77 -----------------FGENKDHERNCQCAP--CACPLLDCNFLG 103
+ E +HE C+C P C CP C + G
Sbjct: 126 VKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQG 171
>sp|Q8IUQ4|SIAH1_HUMAN E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1
SV=2
Length = 282
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 35/156 (22%)
Query: 6 NGSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSR 65
G+ S LF+CP+ + + P+ Q +GH++CS+C K+ CP CR +
Sbjct: 26 TGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTC-CPTCRGPL---GS 81
Query: 66 VMDIALEK------------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGSA 105
+ ++A+EK T+ E DHE C+ P C CP C + GS
Sbjct: 82 IRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSL 141
Query: 106 SQLYLYFSWKNGKTFVSFTYKKRVKVTLNVNDSVFL 141
+ + ++ + TL D VFL
Sbjct: 142 DAVMPH-----------LMHQHKSITTLQGEDIVFL 166
>sp|Q8S3N1|SINA5_ARATH E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana
GN=SINAT5 PE=1 SV=2
Length = 309
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 9 ITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRS------CVML 62
I+ S +L +CP+ ++ P+ Q NGH +CS+C ++V+N+CP CR C+ L
Sbjct: 34 ISPATSVYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLAL 93
Query: 63 RSRVMDIALE-KTMSFG--------ENKDHERNCQCAPCACP 95
+ L K + G HE C P +CP
Sbjct: 94 EKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCP 135
>sp|P29304|SINA_DROVI E3 ubiquitin-protein ligase sina OS=Drosophila virilis GN=sina PE=3
SV=1
Length = 314
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 24/106 (22%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEKTMS- 76
LF+CP+ + + P+ Q +GH++C SC +K+ CP CR + + + ++A+E+ S
Sbjct: 70 LFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTC-CPTCRGPL---ANIRNLAMEEVASN 125
Query: 77 -----------------FGENKDHERNCQCAP--CACPLLDCNFLG 103
+ E +HE C+C P C CP C + G
Sbjct: 126 VKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQG 171
>sp|Q9M2P4|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana
GN=SINAT2 PE=2 SV=1
Length = 308
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 8 SITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACR------SCVM 61
I S +L +CP+ + P+ Q NGH +CS+C +V N CP CR C+
Sbjct: 47 GIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLA 106
Query: 62 LRS---------RVMDIALEKTMSFGENKDHERNCQCAPCACPLL--DCNFLGSASQLYL 110
L R ++ + HE++C+ P CP +C+ G L +
Sbjct: 107 LEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVV 166
Query: 111 YF 112
+
Sbjct: 167 HL 168
>sp|Q920M9|SIAH1_RAT E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1
PE=1 SV=2
Length = 282
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 35/156 (22%)
Query: 6 NGSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSR 65
G+ S LF+CP+ + + P+ Q +GH++CS+C K+ CP CR +
Sbjct: 26 TGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTC-CPTCRGPL---GS 81
Query: 66 VMDIALEK------------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGSA 105
+ ++A+EK T+ E +HE C+ P C CP C + GS
Sbjct: 82 IRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSL 141
Query: 106 SQLYLYFSWKNGKTFVSFTYKKRVKVTLNVNDSVFL 141
+ + ++ + TL D VFL
Sbjct: 142 DAVMPH-----------LMHQHKSITTLQGEDIVFL 166
>sp|P61092|SIA1A_MOUSE E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1
SV=1
Length = 282
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 35/156 (22%)
Query: 6 NGSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSR 65
G+ S LF+CP+ + + P+ Q +GH++CS+C K+ CP CR +
Sbjct: 26 TGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTC-CPTCRGPL---GS 81
Query: 66 VMDIALEK------------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGSA 105
+ ++A+EK T+ E +HE C+ P C CP C + GS
Sbjct: 82 IRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSL 141
Query: 106 SQLYLYFSWKNGKTFVSFTYKKRVKVTLNVNDSVFL 141
+ + ++ + TL D VFL
Sbjct: 142 DAVMPH-----------LMHQHKSITTLQGEDIVFL 166
>sp|Q9I8X5|SIAH2_XENLA E3 ubiquitin-protein ligase siah2 OS=Xenopus laevis GN=siah2 PE=2
SV=1
Length = 313
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 39/158 (24%)
Query: 9 ITSTISDQ-----DLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLR 63
IT +S Q LF+CP+ + + P+ Q GH++C+ C K++ CP CR+ L
Sbjct: 52 ITGPLSQQHQELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSC-CPTCRA--SLT 108
Query: 64 SRVMDIALEKTMS------------------FGENKDHERNCQCAP--CACPLLDCNFLG 103
+ ++A+EK S E +HE C+ P C CP C + G
Sbjct: 109 PSIRNLAMEKVASAVLFPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQG 168
Query: 104 SASQLYLYFSWKNGKTFVSFTYKKRVKVTLNVNDSVFL 141
S + + T+ + TL D VFL
Sbjct: 169 SLENVMQH-----------LTHSHKSITTLQGEDIVFL 195
>sp|Q9STN8|SINA4_ARATH E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana
GN=SINAT4 PE=2 SV=1
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 17/104 (16%)
Query: 17 DLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRS------CVMLRS------ 64
+L +CP+ ++ P+ Q NGH +CS+C +V+N+CP CR C+ L
Sbjct: 60 ELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLE 119
Query: 65 ---RVMDIALEKTMSFGENKDHERNCQCAPCACPLL--DCNFLG 103
+ ++ + + HE C P +CP +C +G
Sbjct: 120 LPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVG 163
>sp|P93748|SINA1_ARATH Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana
GN=SINAT1 PE=3 SV=1
Length = 305
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 7 GSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACR------SCV 60
G S+ +L +CP+ + P+ Q NGH +CSSC +V N CP CR C+
Sbjct: 43 GKFHSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCL 102
Query: 61 MLRS---------RVMDIALEKTMSFGENKDHERNCQCAPCACPLL--DCNFLGSASQL 108
L R ++ + + HE++C+ +CP +C+ G L
Sbjct: 103 ALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTL 161
>sp|Q7ZVG6|SIAH1_DANRE E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2
Length = 282
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 35/156 (22%)
Query: 6 NGSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSR 65
+G+ S LF+CP+ + + P+ Q +GH++CS+C K+ CP CR +
Sbjct: 26 SGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTC-CPTCRGPL---GS 81
Query: 66 VMDIALEK------------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGSA 105
+ ++A+EK T+ + +HE C+ P C CP C + GS
Sbjct: 82 IRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSL 141
Query: 106 SQLYLYFSWKNGKTFVSFTYKKRVKVTLNVNDSVFL 141
+ + ++ + TL D VFL
Sbjct: 142 DAVMPH-----------LLHQHKSITTLQGEDIVFL 166
>sp|Q7SYL3|SIAH2_DANRE E3 ubiquitin-protein ligase Siah2 OS=Danio rerio GN=siah2l PE=2
SV=2
Length = 331
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEKTMS- 76
LF+CP+ + + P+ Q GH++C+ C K++ CP CR L + ++A+EK S
Sbjct: 86 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSC-CPTCRG--PLTPSIRNLAMEKVAST 142
Query: 77 -----------------FGENKDHERNCQCAP--CACPLLDCNFLGSASQLYLYFSWKNG 117
E +HE C+ P C CP C + GS ++ +
Sbjct: 143 LPFPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPH------ 196
Query: 118 KTFVSFTYKKRVKVTLNVNDSVFL 141
+ + TL D VFL
Sbjct: 197 -----LMHAHKSITTLQGEDIVFL 215
>sp|Q8R4T2|SIAH2_RAT E3 ubiquitin-protein ligase SIAH2 OS=Rattus norvegicus GN=Siah2
PE=1 SV=2
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEK---- 73
LF+CP+ + + P+ Q GH++C+ C K++ CP CR L + ++A+EK
Sbjct: 78 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSC-CPTCRG--ALTPSIRNLAMEKVASA 134
Query: 74 --------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGSASQLYLYFSWKNG 117
T+ E +HE C+ P C CP C + GS + +
Sbjct: 135 VLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSH------ 188
Query: 118 KTFVSFTYKKRVKVTLNVNDSVFL 141
+ + TL D VFL
Sbjct: 189 -----LMHAHKSITTLQGEDIVFL 207
>sp|Q06986|SIAH2_MOUSE E3 ubiquitin-protein ligase SIAH2 OS=Mus musculus GN=Siah2 PE=1
SV=2
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEK---- 73
LF+CP+ + + P+ Q GH++C+ C K++ CP CR L + ++A+EK
Sbjct: 78 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSC-CPTCRG--ALTPSIRNLAMEKVASA 134
Query: 74 --------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGSASQLYLYFSWKNG 117
T+ E +HE C+ P C CP C + GS + +
Sbjct: 135 VLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSH------ 188
Query: 118 KTFVSFTYKKRVKVTLNVNDSVFL 141
+ + TL D VFL
Sbjct: 189 -----LMHAHKSITTLQGEDIVFL 207
>sp|O43255|SIAH2_HUMAN E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1
SV=1
Length = 324
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEK---- 73
LF+CP+ + + P+ Q GH++C+ C K++ CP CR L + ++A+EK
Sbjct: 77 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSC-CPTCRG--ALTPSIRNLAMEKVASA 133
Query: 74 --------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGSASQLYLYFSWKNG 117
T+ E +HE C+ P C CP C + GS + +
Sbjct: 134 VLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSH------ 187
Query: 118 KTFVSFTYKKRVKVTLNVNDSVFL 141
+ + TL D VFL
Sbjct: 188 -----LMHAHKSITTLQGEDIVFL 206
>sp|Q06985|SIA1B_MOUSE E3 ubiquitin-protein ligase SIAH1B OS=Mus musculus GN=Siah1b PE=2
SV=2
Length = 282
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 38/154 (24%)
Query: 11 STISDQDL---FDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVM 67
+T S+ DL F+CP+ + + P+ Q +GH++CS+C K+ CP CR + +
Sbjct: 28 TTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTC-CPTCRGPL---GSIR 83
Query: 68 DIALEK------------------TMSFGENKDHERNCQCAP--CACPLLDCNFLGSASQ 107
++A+EK T+ + +HE C+ P C CP C + GS
Sbjct: 84 NLAVEKVANSVLFPCKYSASGCEITLPHTKKAEHEELCEFRPYSCPCPGASCKWQGSLDA 143
Query: 108 LYLYFSWKNGKTFVSFTYKKRVKVTLNVNDSVFL 141
+ + ++ + TL D VFL
Sbjct: 144 VMPH-----------LMHQHKSITTLQGEDIVFL 166
>sp|A8X679|SIAH1_CAEBR E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis briggsae
GN=siah-1 PE=3 SV=2
Length = 434
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 35/155 (22%)
Query: 7 GSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRV 66
G+ S+ +F+CP+ + + P Q +GH++CS+C K+ CP CR V
Sbjct: 157 GADDSSAEILSVFECPVCLEYMLPPYMQCPSGHLVCSNCRPKLQC-CPTCRGPT---PSV 212
Query: 67 MDIALEK---TMSFG---------------ENKDHERNCQCAP--CACPLLDCNFLGSAS 106
++ LEK T+ F + DHE C+ P C CP C + G+ +
Sbjct: 213 RNLGLEKIANTVRFPCKFSNSGCPLNFHHIDKMDHEELCEYRPYSCPCPGASCKWQGALA 272
Query: 107 QLYLYFSWKNGKTFVSFTYKKRVKVTLNVNDSVFL 141
+ + K S T TL D VFL
Sbjct: 273 DVMDHLK----KVHKSIT-------TLQGEDIVFL 296
>sp|Q965X6|SIAH1_CAEEL E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis elegans
GN=siah-1 PE=1 SV=3
Length = 419
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 35/144 (24%)
Query: 18 LFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEK---T 74
+F+CP+ + + P Q +GH++CS+C K+ CP CR V ++ LEK T
Sbjct: 153 VFECPVCLEYMLPPYMQCSSGHLVCSNCRPKL-QCCPTCRGPT---PSVRNLGLEKIANT 208
Query: 75 MSF---------------GENKDHERNCQCAP--CACPLLDCNFLGSASQLYLYFSWKNG 117
+ F + +HE C+ P C CP C + G S + +
Sbjct: 209 VRFPCKFSTSGCPLNFHHADKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLK---- 264
Query: 118 KTFVSFTYKKRVKVTLNVNDSVFL 141
K S T TL D VFL
Sbjct: 265 KIHKSIT-------TLQGEDIVFL 281
>sp|Q864U1|BRCA1_BOVIN Breast cancer type 1 susceptibility protein homolog OS=Bos taurus
GN=BRCA1 PE=1 SV=1
Length = 1849
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRS 64
Q + +CPI + +K PVS + HI C C+ K+ N +CP C++ + RS
Sbjct: 19 QKILECPICLELIKEPVSTKCD-HIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
>sp|P38398|BRCA1_HUMAN Breast cancer type 1 susceptibility protein OS=Homo sapiens
GN=BRCA1 PE=1 SV=2
Length = 1863
Score = 37.7 bits (86), Expect = 0.028, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRS 64
Q + +CPI + +K PVS + HI C C+ K+ N +CP C++ + RS
Sbjct: 19 QKILECPICLELIKEPVSTKCD-HIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
>sp|O54952|BRCA1_RAT Breast cancer type 1 susceptibility protein homolog OS=Rattus
norvegicus GN=Brca1 PE=1 SV=1
Length = 1817
Score = 37.4 bits (85), Expect = 0.034, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRS 64
Q + +CPI + +K PVS + HI C C+ K+ N +CP C++ + RS
Sbjct: 19 QKILECPICLELIKEPVSTQCD-HIFCKFCMLKLLNQKKGPSQCPLCKNEITKRS 72
>sp|P48754|BRCA1_MOUSE Breast cancer type 1 susceptibility protein homolog OS=Mus
musculus GN=Brca1 PE=1 SV=3
Length = 1812
Score = 37.4 bits (85), Expect = 0.035, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRS 64
Q + +CPI + +K PVS + HI C C+ K+ N +CP C++ + RS
Sbjct: 19 QKILECPICLELIKEPVSTKCD-HIFCKFCMLKLLNQKKGPSQCPLCKNEITKRS 72
>sp|Q99PD2|RN138_RAT E3 ubiquitin-protein ligase RNF138 OS=Rattus norvegicus GN=Rnf138
PE=2 SV=1
Length = 209
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNK----CPACRSCVMLRSRV---MD 68
+D F CP+ + LK PV + H+ C C + CP CR V R R
Sbjct: 13 EDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRERACPERA 72
Query: 69 IALEKTM 75
I LE M
Sbjct: 73 IDLENIM 79
>sp|Q8WVD3|RN138_HUMAN E3 ubiquitin-protein ligase RNF138 OS=Homo sapiens GN=RNF138 PE=1
SV=1
Length = 245
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 11 STISDQDLFDCPIWYQALKVPVSQSINGHIICSSC----LAKVNNKCPACRSCVMLRSRV 66
+T +D F CP+ + LK PV + H+ C C + + CP CR V R R
Sbjct: 8 ATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRERA 67
>sp|Q9CQE0|RN138_MOUSE E3 ubiquitin-protein ligase RNF138 OS=Mus musculus GN=Rnf138 PE=2
SV=1
Length = 245
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 11 STISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNK----CPACRSCVMLRSRV 66
+T +D F CP+ + LK PV + H+ C C + CP CR V R R
Sbjct: 8 ATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRERA 67
>sp|Q1L8G6|AKIB1_DANRE Ankyrin repeat and IBR domain-containing protein 1 OS=Danio rerio
GN=ankib1 PE=3 SV=1
Length = 1060
Score = 36.6 bits (83), Expect = 0.075, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 22 PIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCVMLRSRVMDIALEKTMSFGENK 81
P+ + LK P GH+ C CL + C C + M +V ++ E+ E
Sbjct: 444 PLSFPLLKAPAVDCGKGHLFCWECLGDAHEPCD-CETWKMWLQKVSEMKPEELAGVSEAY 502
Query: 82 DHERNC--------QCAPCACPLLD---CNFLGSASQLYLYFSW 114
+ NC CA C P+ CN + A Y F W
Sbjct: 503 EDAANCLWLLSNSKPCANCKSPIQKNEGCNHMQCAKCKY-DFCW 545
>sp|Q32LN5|RN138_BOVIN E3 ubiquitin-protein ligase RNF138 OS=Bos taurus GN=RNF138 PE=2
SV=1
Length = 245
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 11 STISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNK----CPACRSCVMLRSRV 66
+T +D F CP+ + LK PV + H+ C C + CP CR V R R
Sbjct: 8 ATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVTRRERA 67
>sp|Q810I1|TRI50_RAT E3 ubiquitin-protein ligase TRIM50 OS=Rattus norvegicus GN=Trim50
PE=2 SV=1
Length = 483
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRSRVMDI 69
QD CPI + K P+ GH C +CL ++ +CP CR V S ++
Sbjct: 11 QDQLQCPICLEVFKEPLMLQC-GHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSSSPPNV 69
Query: 70 ALEKTM 75
+L + +
Sbjct: 70 SLARVI 75
>sp|Q86XT4|TRI50_HUMAN E3 ubiquitin-protein ligase TRIM50 OS=Homo sapiens GN=TRIM50 PE=1
SV=1
Length = 487
Score = 34.3 bits (77), Expect = 0.31, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 11 STISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRS 64
S + +D CPI + K P+ GH C CL ++ +CP CR V S
Sbjct: 6 SLLELEDWLQCPICLEVFKEPLMLQC-GHSYCKGCLVSLSCHLDAELRCPVCRQAVDGSS 64
Query: 65 RVMDIALEKTM 75
+ +++L + +
Sbjct: 65 SLPNVSLARVI 75
>sp|Q3MV19|TRF6A_XENLA TNF receptor-associated factor 6-A OS=Xenopus laevis GN=traf6-a
PE=1 SV=1
Length = 556
Score = 34.3 bits (77), Expect = 0.35, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 21/104 (20%)
Query: 19 FDCPIWYQALKVPVSQSINGHIICSSCLAK----VNNKCP----------------ACRS 58
++CPI AL+ V Q+ GH C +C+ K +KCP A R
Sbjct: 70 YECPICLMALREAV-QTPCGHRFCKACILKSLRNAGHKCPVDNEILMEKQLFPDNFAKRE 128
Query: 59 CVMLRSRVMDIALEKTMSFGENKDHERNCQCAPCACPLLDCNFL 102
+ LR + ++ TM + H CQ A C +FL
Sbjct: 129 ILSLRVKCPNLGCTDTMELRHLEHHLVQCQFASVECSQCQGSFL 172
>sp|Q6J6I8|BRCA1_GORGO Breast cancer type 1 susceptibility protein homolog OS=Gorilla
gorilla gorilla GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRS 64
Q + +CPI + +K PVS + HI C C+ K+ N +CP C++ + RS
Sbjct: 19 QKILECPICLELIKEPVSTKCD-HIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
>sp|Q9GKK8|BRCA1_PANTR Breast cancer type 1 susceptibility protein homolog OS=Pan
troglodytes GN=BRCA1 PE=2 SV=2
Length = 1863
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRS 64
Q + +CPI + +K PVS + HI C C+ K+ N +CP C++ + RS
Sbjct: 19 QKILECPICLELIKEPVSTKCD-HIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
>sp|Q6J6J0|BRCA1_PONPY Breast cancer type 1 susceptibility protein homolog OS=Pongo
pygmaeus GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 16 QDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNN------KCPACRSCVMLRS 64
Q + +CPI + +K PVS + HI C C+ K+ N +CP C++ + RS
Sbjct: 19 QKILECPICLELIKEPVSTKCD-HIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
>sp|Q9P2G1|AKIB1_HUMAN Ankyrin repeat and IBR domain-containing protein 1 OS=Homo sapiens
GN=ANKIB1 PE=1 SV=3
Length = 1089
Score = 33.5 bits (75), Expect = 0.62, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)
Query: 1 LRSCKNGSITSTISDQDLFDCPIWYQALKVPVSQSINGHIICSSCLAKVNNKCPACRSCV 60
+R K GS TS D P+ L+ P GH+ C CL + + C C++
Sbjct: 431 VRLTKQGSNTS---GSDTLSFPL----LRAPAVDCGKGHLFCWECLGEAHEPCD-CQTWK 482
Query: 61 MLRSRVMDIALEKTMSFGENKDHERNC--------QCAPCACPLLD---CNFLGSASQLY 109
++ ++ E+ + E + NC CA C P+ CN + A Y
Sbjct: 483 NWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKY 542
Query: 110 LYFSW 114
F W
Sbjct: 543 -DFCW 546
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.135 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,248,566
Number of Sequences: 539616
Number of extensions: 1974157
Number of successful extensions: 6225
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 6128
Number of HSP's gapped (non-prelim): 139
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)