BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042265
(490 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/487 (65%), Positives = 385/487 (79%), Gaps = 4/487 (0%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLF--LSPCHILTTILYAITTFKPISSASSPTTDPLS-Y 63
I++CK++KQ+HQ+HAH +T GLL+ +LT IL A T P ++AS T L+ Y
Sbjct: 22 IRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALTGY 81
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
ALS+FN IP PSTF YNT+IRAHTL SSPL A+V+F +MR +S+PPD ++FPF L+ACS
Sbjct: 82 ALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKACSL 141
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + SLAQT+HSQ K GF D+FV N+L+HVY V L A ++F+E +DVVS N L
Sbjct: 142 LPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNAL 201
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS-DQCEEAIQLFCNMMDLDIKPD 242
I G++K GD AR+LFD+MP RDAVSWGTL+AGYAQS D C +AIQLF M+ ++PD
Sbjct: 202 IGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVRPD 261
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
NIALVSALSACA+LGELEQGK+IH YI+ N+I +++FLSTGLVD YAKCG I TA EIFE
Sbjct: 262 NIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETAREIFE 321
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
SS +KNLFTWNA+LVGL MHG G LSL YFSRMIEA IKPDGV+ LG LVGC HAGLV E
Sbjct: 322 SSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCE 381
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
AR F EME VY V +ELKHYGCMADLLGRAGLI EA+EMI++MPMGGDVFVW G+LGGC
Sbjct: 382 ARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVLGGC 441
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIHGNVEIAE AAE+VM L PED GVY ++AD+YANA RWEDV +IRR + + ++KKN G
Sbjct: 442 RIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVKKNPG 501
Query: 483 CSLIQLN 489
CSL+QLN
Sbjct: 502 CSLVQLN 508
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 105/291 (36%), Gaps = 51/291 (17%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF + P + F++N ++ + ++ FS+M I PD SF +L C
Sbjct: 316 AREIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGH 375
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE--ILYR---DVV 178
G +C+ A+ F E ++YR ++
Sbjct: 376 A----------------GLVCE-------------------ARNFFQEMEVVYRVPRELK 400
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFR-DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+ D +AG + A ++ +RMP D WG ++ G E A + N+M L
Sbjct: 401 HYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVLGGCRIHGNVEIAEKAAENVMAL 460
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST---------GLVDFY 288
+ + D + + A A G E I R + Q++ + S G V
Sbjct: 461 NPEDDGVYSIMA-DIYANAGRWEDVARIRRLMHSRQVKKNPGCSLVQLNNGVFHGFVAGS 519
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
A YI +E + ++ NA + G A+ RL S M R
Sbjct: 520 ASSSYILNGMETEKGISISSIMACNASIYGSALLLFYRLVYALTSYMFTLR 570
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/493 (64%), Positives = 389/493 (78%), Gaps = 8/493 (1%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPC---HILTTILYAITTFKPISSASSPTT 58
++ I++CKTI Q++Q+HA TKGLL L+ C ILT ILYA+TT S+ S
Sbjct: 29 SIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSL-- 86
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L YA+S F+NI PSTF YN IIR HTL SS L+A+ F QMR S+PPDF+S+PF L
Sbjct: 87 --LHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFAL 144
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+AC+ L SLAQ +HSQV K GF+ D++V+NSL+HVY +F L A ++FDE RDVV
Sbjct: 145 KACAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVV 204
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N L+DG+VKAG+ AR++FD MP RD+VSWG+L+AGYAQ C EAI LF MM L
Sbjct: 205 SYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLK 264
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PDNIALVSALSACA+LGELE+GK IH YI+ N+I+ DSFLSTGLVDFYAK G I+TAI
Sbjct: 265 LEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTAI 324
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++FE S +K+L TWNAML+G+AMHG L L YFSRM+EA IKPDG++ LG LVGCSH G
Sbjct: 325 KVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGG 384
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LVDEA+KLFDEMES+YGV +ELKHYGCMADLL RAGLI+EA+E+ K +PMGGD+FVWSGL
Sbjct: 385 LVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIFVWSGL 444
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK-I 477
LGGCRIHGN+EIAE AA+ VM+LKPEDGGVY +LA+VYANADRWEDVVKIRRS+ + + +
Sbjct: 445 LGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRAV 504
Query: 478 KKNAGCSLIQLNG 490
KKNAG S IQL G
Sbjct: 505 KKNAGRSSIQLGG 517
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/488 (64%), Positives = 387/488 (79%), Gaps = 6/488 (1%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKG-LLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
IK+CKTI Q+HQ+HA+ +T L F S +LT LY +TT + S +T L Y
Sbjct: 21 KLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTLTT----KAKSKSSTSLLHY 76
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A SIFN+I PSTF YNTIIR HTL S P+ A+ F+QMR +S+P D +SFPF L+AC+Q
Sbjct: 77 AKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSHSFPFTLKACAQ 136
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L A+ +H QVLK GF+ D++V+NSL+H Y V DA ++FDE RDVVS N L
Sbjct: 137 LGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKVFDESPQRDVVSYNVL 196
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
IDG+VKAGD+ AR+LFD MP RD+VSW T++AG A+ D CEEAI+LF MMDL+I+PDN
Sbjct: 197 IDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFDFMMDLEIRPDN 256
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ALVS LSACA+LGELE+GK IH YIE N ++VD+FLSTGLVDFYAKCG ++ A++IF+S
Sbjct: 257 VALVSTLSACAQLGELEKGKKIHDYIERNAMKVDTFLSTGLVDFYAKCGCVDIALKIFDS 316
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
S +KNLFTWNAMLVGLAMHG G L L YFSRMIEA +KPDG++ILG LVGCSH+GLVDEA
Sbjct: 317 SSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGISILGVLVGCSHSGLVDEA 376
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
RKLFDEMESVYGV +E KHYGCMADLLGRAGLI++ +EMIK MP GGD+ VWSGLLGGCR
Sbjct: 377 RKLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDMPRGGDMSVWSGLLGGCR 436
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK-IKKNAG 482
IHG+VEIAE AA+H+M+LKP+DGGVY +LA+VYANA+RWEDV+ IRRSL + + + K AG
Sbjct: 437 IHGDVEIAEKAAKHLMELKPDDGGVYSILANVYANAERWEDVMNIRRSLSSNRVVTKIAG 496
Query: 483 CSLIQLNG 490
SLIQL+G
Sbjct: 497 FSLIQLDG 504
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 136/343 (39%), Gaps = 40/343 (11%)
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH---RLRDAQELFDEILYRDVV 178
S +H Q HS ++KL C +H Y + + + L + LY
Sbjct: 4 SSSSNHITPQNYHSIIIKLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLY---- 59
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+ T L +A+ +F+ + + T++ + A+ F M L
Sbjct: 60 TLTTKAKSKSSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLS 119
Query: 239 IKPDNIALVSALSACARLGELEQGKNIH----RYIELNQIRVDSFLSTG----------- 283
+ D+ + L ACA+LG + + +H ++ L+ + V + L G
Sbjct: 120 VPLDSHSFPFTLKACAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAY 179
Query: 284 ----------------LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRL 327
L+D + K G + A E+F+ ++ +WN ++ G A
Sbjct: 180 KVFDESPQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEE 239
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
++ F M++ I+PD V ++ L C+ G +++ +K+ D +E G +
Sbjct: 240 AIELFDFMMDLEIRPDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKVDTFLSTG-LV 298
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
D + G ++ AL++ ++F W+ +L G +HG E+
Sbjct: 299 DFYAKCGCVDIALKIFDS-SSDKNLFTWNAMLVGLAMHGYGEL 340
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 294/484 (60%), Positives = 375/484 (77%), Gaps = 3/484 (0%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
IK+CK+I Q+HQ+HAH +T GLL L IL IL +++ SS S+ YALS
Sbjct: 7 IKQCKSISQLHQVHAHSITTGLLPLHTFPILNNILSTLSSLLTTSSNSNSIIT--FYALS 64
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F++IP PSTFS+NT+IR HTL SPL A+ LFS +R +S+PPDF++FPF+L+A +QL S
Sbjct: 65 LFHSIPNPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLKASAQLHS 124
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
SLAQ++HSQ LK G + D+F LN+L+ VY + HR+ DA +LF E + DVVS N LI G
Sbjct: 125 LSLAQSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHG 184
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
VK ++ AR+LFD MP RD +SWGT++AGY+ C +AI+LF MM L++KPDNIAL
Sbjct: 185 LVKTRQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQAIELFNEMMRLEVKPDNIAL 244
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS LSACA+LGELEQG +H YI+ N+IRVDS+L+TGLVD YAKCG + TA ++FES E
Sbjct: 245 VSVLSACAQLGELEQGSIVHDYIKRNRIRVDSYLATGLVDLYAKCGCVETARDVFESCME 304
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K +FTWNAMLVG A+HG G + L YFSRM+ +KPDGVT+LG LVGCSHAGLV EAR++
Sbjct: 305 KYVFTWNAMLVGFAIHGEGSMVLEYFSRMVSEGVKPDGVTLLGVLVGCSHAGLVLEARRI 364
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
FDEME+VYGV +E KHYGCMAD+L RAGLIEE +EM+K MP GGDVF W GLLGGCRIHG
Sbjct: 365 FDEMENVYGVKREGKHYGCMADMLARAGLIEEGVEMVKAMPSGGDVFAWGGLLGGCRIHG 424
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK-IKKNAGCSL 485
NVE+A+ AA+ VM++KPEDGGVY V+A++YA+ ++W+D+VK+RRSL A K KK G SL
Sbjct: 425 NVEVAKKAAQQVMEIKPEDGGVYSVMANIYAHTEQWDDLVKVRRSLSANKRAKKITGRSL 484
Query: 486 IQLN 489
I+LN
Sbjct: 485 IRLN 488
>gi|15240355|ref|NP_200988.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171532|sp|Q9FLS9.1|PP441_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61800
gi|10176873|dbj|BAB10080.1| unnamed protein product [Arabidopsis thaliana]
gi|332010136|gb|AED97519.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 499
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/491 (54%), Positives = 354/491 (72%), Gaps = 13/491 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLF--LSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+K C+T+K +HQ HA F+T G + + +L+AIT+ P +SAS + +SY
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASK---EVVSY 66
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFS-SPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
A S+F I PSTF +NTIIR TL S L++ F +MR S+PPDF++FPF+ +AC+
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 123 QLCSH--SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ +L +T+H Q L+ G + D+F LN+L+ VY + + A +LFDE RDVV+
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LIDG VKA ++ AR+LFD MP RD VSW +L++GYAQ + C EAI+LF M+ L +K
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PDN+A+VS LSACA+ G+ ++GK IH Y + ++ +DSFL+TGLVDFYAKCG+I+TA+EI
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +K LFTWNAM+ GLAMHG G L++ YF +M+ + IKPDGVT + LVGCSH+GLV
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG----DVFVWS 416
DEAR LFD+M S+Y V++E+KHYGCMADLLGRAGLIEEA EMI++MP G + WS
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWS 426
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG- 475
GLLGGCRIHGN+EIAE AA V L PEDGGVYKV+ ++YANA+RWE+VVK+R +D
Sbjct: 427 GLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDK 486
Query: 476 KIKKNAGCSLI 486
K+KKN G S +
Sbjct: 487 KVKKNVGFSKV 497
>gi|297797141|ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
gi|297312290|gb|EFH42714.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
Length = 1401
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 348/480 (72%), Gaps = 12/480 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLF--LSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+K C+T+K +HQ HA F+T G + L+ + +L+AIT+ P +S S+ +SY
Sbjct: 424 LLKLCRTLKHLHQFHAQFITSGRISSSLNQNSVFANVLFAITSISPSASTSNVV---VSY 480
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSS-PLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
A S+ I PSTF +NTIIR +TL L++ F +MR S+PPDF+++PF+ +AC+
Sbjct: 481 ATSVLRFITNPSTFCFNTIIRIYTLHEPLSLSSQRFFVEMRRRSVPPDFHTYPFVFKACA 540
Query: 123 QLCSH--SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ SL +T+H Q L+ G + D+F LN+L+ Y + + A +LFDE RDVV+
Sbjct: 541 AKKNGDLSLVKTLHCQALRFGLLSDLFTLNTLIRAYSLMAPIGSALQLFDENPQRDVVTY 600
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LIDG VKA ++ AR+LFD MPFRD VSW +L+AGYAQ +QC EAI LF M+ L +K
Sbjct: 601 NVLIDGLVKACEIVRARELFDSMPFRDLVSWNSLIAGYAQMNQCREAISLFDEMIGLGLK 660
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PDN+A+VS LSACA+ G+LE+GK IH Y + ++ +DSFL+TGLVDFYAKCG+I+TA+EI
Sbjct: 661 PDNVAIVSTLSACAQSGDLEKGKAIHDYTKKKRLFIDSFLATGLVDFYAKCGFIDTAMEI 720
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F S +K LFTWNAM+ GLAMHG G L++ YF +M+ + IKPDGV+ + LVGCSH+GLV
Sbjct: 721 FHLSSDKTLFTWNAMITGLAMHGNGELTVDYFHKMVSSGIKPDGVSFISVLVGCSHSGLV 780
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG----DVFVWS 416
EARKLFD+M S+Y V +E+KHYGCMADLLGRAGLIEEA EMI++MP G + WS
Sbjct: 781 GEARKLFDQMRSLYDVDREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGKREKLLAWS 840
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
GLLGGCRIHGN+E+AE AA+ V L PEDGGVYKV+ ++YANA+RWEDVVK+R ++ K
Sbjct: 841 GLLGGCRIHGNIEVAEKAAKRVKALSPEDGGVYKVMVEMYANAERWEDVVKVREMIERDK 900
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/486 (40%), Positives = 304/486 (62%), Gaps = 11/486 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++RC ++++ QIH L GL IL I K ++ +SP + L+YA
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGL-----------ILDEIPASKLLAFCASPNSGSLAYA 71
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
++F+ I P+TF +NT+IR ++ P A++L+ M S+P + Y+FPFLL+ACS +
Sbjct: 72 RTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q IH+ ++K+GF +++ NSL++VY ++ A+ LFD++ RD VS N++I
Sbjct: 132 SASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
DGY K G++ A ++F+ MP R+ +SW ++++G + + +EA+ LF M IK DN+
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
ALVS L ACA LG L+QGK IH YI+ ++I +D L L+D YAKCG + AIE+F
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+EK + W AM+ G A+HG GR +L +F +M A ++P+ +T G L CSHAGLV EA+
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
LF+ ME ++G ++HYGCM DLLGRAGL++EA E+I+ MP+ + +W LL C I
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGN+E+ + + ++++ P GG Y LA ++A A W ++RR + + K GCS
Sbjct: 432 HGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCS 491
Query: 485 LIQLNG 490
+I +NG
Sbjct: 492 VISVNG 497
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/486 (40%), Positives = 304/486 (62%), Gaps = 11/486 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++RC ++++ QIH L GL IL I K ++ +SP + L+YA
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGL-----------ILDEIPASKLLAFCASPNSGSLAYA 71
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
++F+ I P+TF +NT+IR ++ P A++L+ M S+P + Y+FPFLL+ACS +
Sbjct: 72 RTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q IH+ ++K+GF +++ NSL++VY ++ A+ LFD++ RD VS N++I
Sbjct: 132 SALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
DGY K G++ A ++F+ MP R+ +SW ++++G + + +EA+ LF M IK DN+
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
ALVS L ACA LG L+QGK IH YI+ ++I +D L L+D YAKCG + AIE+F
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+EK + W AM+ G A+HG GR +L +F +M A ++P+ +T G L CSHAGLV EA+
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
LF+ ME ++G ++HYGCM DLLGRAGL++EA E+I+ MP+ + +W LL C I
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGN+E+ + + ++++ P GG Y LA ++A A W ++RR + + K GCS
Sbjct: 432 HGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCS 491
Query: 485 LIQLNG 490
+I +NG
Sbjct: 492 VISVNG 497
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/488 (40%), Positives = 303/488 (62%), Gaps = 13/488 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+F + +I ++HQ HAH L GL+ + A +S+ S P YA
Sbjct: 12 SFAEMATSISELHQAHAHILKSGLIH--------STFAASRLIASVSTNSHAQAIP--YA 61
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SIF+ IP P+++ +NTIIRA+ +P A+ +F QM S+ PD Y+F F L++C
Sbjct: 62 HSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSF 121
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ IH VLK G D+F+ N+L+H+Y + DA+ L D +L RDVVS N L+
Sbjct: 122 SGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALL 181
Query: 185 DGYVKAG--DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
Y + G +LA +R++F P ++ VSW ++ GY+ + + E + LF +M +KPD
Sbjct: 182 SAYAERGLMELA-SRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPD 240
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
N LVS LSACA +G L QG+ +H YI+ N I +D F++T LVD Y+KCG I A+E+F
Sbjct: 241 NCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFN 300
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
S K++ TWN+++ GL+ HG G+ +L FS M+ KP+ VT + L CS AGL+DE
Sbjct: 301 SCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDE 360
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R++F+ M V+G+ ++HYGCM DLLGR GL+EEA E+++KMP VW LLG C
Sbjct: 361 GREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGAC 420
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R HGNVE+AE A+ +++L P++ + L+++YA+ RW+DV+++R+ + A ++K+ G
Sbjct: 421 RNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPG 480
Query: 483 CSLIQLNG 490
CS+I+++G
Sbjct: 481 CSMIEVDG 488
>gi|357167426|ref|XP_003581157.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like, partial [Brachypodium distachyon]
Length = 357
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/342 (55%), Positives = 249/342 (72%)
Query: 148 VLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRD 207
V N+L+ +Y A +FDE+ DVVS N L+DGY+KAG L A + F RMP RD
Sbjct: 15 VGNALVSLYAKNALPDSACRVFDEMPAPDVVSYNALMDGYIKAGRLGLATKEFMRMPQRD 74
Query: 208 AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHR 267
AVSWGT+VAG A++ + EEA+ LF M +PD+I L + LS CA+LG LE+G+ +H
Sbjct: 75 AVSWGTVVAGCAKAGRWEEAVLLFDRMRWEGFRPDDIVLAAVLSCCAQLGALEKGREVHE 134
Query: 268 YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRL 327
Y+ ++ R + FL TGLVD YAKCG + A E+F++ E+N+FTWNA++VGLAMHG G +
Sbjct: 135 YVRQSRPRPNVFLCTGLVDLYAKCGCVEIAREVFDTCPERNVFTWNALIVGLAMHGHGTV 194
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
+L YF RM+ +PDGVT LG L+GCSHAGL+D A+++F EME YGVS+ELKHYGCMA
Sbjct: 195 TLKYFDRMLAEGFRPDGVTFLGVLIGCSHAGLIDMAKRIFFEMEMKYGVSRELKHYGCMA 254
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGG 447
DLLGRAGLIEEA+EM+KKMPM GD +VW G+L GCR HGNVE AE AA H+++L PEDGG
Sbjct: 255 DLLGRAGLIEEAMEMVKKMPMEGDTYVWGGILAGCRKHGNVEEAEVAARHLLELNPEDGG 314
Query: 448 VYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
VY V+ +YA+A RWEDV ++R+ +D +N GCS I +
Sbjct: 315 VYSVMTGIYADAGRWEDVARVRKLMDERVGARNVGCSSITTD 356
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 125/314 (39%), Gaps = 12/314 (3%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P P SYN ++ + A F +M D S+ ++ C++
Sbjct: 32 ACRVFDEMPAPDVVSYNALMDGYIKAGRLGLATKEFMRMPQ----RDAVSWGTVVAGCAK 87
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR----DVVS 179
A + ++ GF D VL +++ L +E+ + + +V
Sbjct: 88 AGRWEEAVLLFDRMRWEGFRPDDIVLAAVLSCCAQLGALEKGREVHEYVRQSRPRPNVFL 147
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
C L+D Y K G + AR++FD P R+ +W L+ G A ++ F M+
Sbjct: 148 CTGLVDLYAKCGCVEIAREVFDTCPERNVFTWNALIVGLAMHGHGTVTLKYFDRMLAEGF 207
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAI 298
+PD + + L C+ G ++ K I +E+ G + D + G I A+
Sbjct: 208 RPDGVTFLGVLIGCSHAGLIDMAKRIFFEMEMKYGVSRELKHYGCMADLLGRAGLIEEAM 267
Query: 299 EIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV--TILGALVGCS 355
E+ + E + + W +L G HG + V ++E + GV + G
Sbjct: 268 EMVKKMPMEGDTYVWGGILAGCRKHGNVEEAEVAARHLLELNPEDGGVYSVMTGIYADAG 327
Query: 356 HAGLVDEARKLFDE 369
V RKL DE
Sbjct: 328 RWEDVARVRKLMDE 341
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/519 (39%), Positives = 308/519 (59%), Gaps = 44/519 (8%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ CK+IK + QIHA + SP LT I+T A S DP YALS
Sbjct: 44 LQTCKSIKGLKQIHASIIKT---MPSPDAQLT-----ISTRLSALCAQSLPIDP-RYALS 94
Query: 67 IFNNIPYPSTFSYNTIIRA-HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+ + P+ YN IIR T + + +V++ QM + I PD Y+ PF+L+AC++
Sbjct: 95 LLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESR 154
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + +H Q +K+G DV+V N+LM +Y V +R A+++FD RD+VS T+I
Sbjct: 155 AVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQ 214
Query: 186 GYVK----------------------------------AGDLAHARQLFDRMPFRDAVSW 211
GYVK GD AR++F MP ++ VSW
Sbjct: 215 GYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSW 274
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
++++G AQ Q +E++ +F M L +KPD++ LV+ L++CA LG LE GK +H Y++
Sbjct: 275 NSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDR 334
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
NQIR D F+ LVD YAKCG I+ A +F++ K+++++ AM+VGLAMHG G +L
Sbjct: 335 NQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDL 394
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
FS M + I+PD VT +G L CSH GLV+E RK F++M ++Y + +L+HYGCM DLLG
Sbjct: 395 FSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLG 454
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
RAGLI EA E I+ MP+ D FV LLG C+IHG VE+ E+ + + K++P G Y +
Sbjct: 455 RAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVL 514
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++++Y++A+RW D +K+R+++ ++K GCS I+L+G
Sbjct: 515 MSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDG 553
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/517 (38%), Positives = 302/517 (58%), Gaps = 41/517 (7%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+F + +I ++HQ HAH L GL+ + A +S+ S P YA
Sbjct: 12 SFAEMATSISELHQAHAHILKSGLIH--------STFAASRLIASVSTNSHAQAIP--YA 61
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SIF+ IP P+++ +NTIIRA+ +P A+ +F QM S+ PD Y+F F L++C
Sbjct: 62 HSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSF 121
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL- 183
+ IH VLK G D+F+ N+L+H+Y + DA+ L D +L RDVVS N L
Sbjct: 122 SGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALL 181
Query: 184 ------------------------------IDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
I GYV G L AR++F P ++ VSW
Sbjct: 182 SAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNA 241
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
++ GY+ + + E + LF +M +KPDN LVS LSACA +G L QG+ +H YI+ N
Sbjct: 242 MITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNG 301
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
I +D F++T LVD Y+KCG I A+E+F S K++ TWN+++ GL+ HG G+ +L FS
Sbjct: 302 ISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFS 361
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
M+ KP+ VT + L CS AGL+DE R++F+ M V+G+ ++HYGCM DLLGR
Sbjct: 362 EMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRV 421
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
GL+EEA E+++KMP VW LLG CR HGNVE+AE A+ +++L P++ + L+
Sbjct: 422 GLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLS 481
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++YA+ RW+DV+++R+ + A ++K+ GCS+I+++G
Sbjct: 482 NMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDG 518
>gi|414884311|tpg|DAA60325.1| TPA: hypothetical protein ZEAMMB73_267423 [Zea mays]
Length = 460
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/422 (46%), Positives = 281/422 (66%), Gaps = 15/422 (3%)
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVL-FSQMRTVSIPPDFYSFPFLLRACSQ--LC 125
++ P + +I A++ P AV+L F S+ P +S P + A + L
Sbjct: 38 GHLSLPDPRPHTILIVAYSRLERPFPAVLLLFRSCLRRSLAPTRHSLPLAISAAASAGLR 97
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR-DVVSCNTLI 184
LA ++H+ + + V N+L+ +Y RL DA+ +F+E+ DVVS NTL+
Sbjct: 98 HLPLALSLHAVAVYRNLLPFQHVANALVSLYARHTRLGDARRVFEEMPSAPDVVSYNTLM 157
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
YV G +A AR++F+ MP RDA SWGT++AG A++ Q EEA+ LF M++ +PD++
Sbjct: 158 HAYVNTGSVAVAREVFEGMPVRDATSWGTVIAGSAKAGQLEEAMALFDRMLEEGFRPDDV 217
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
AL + LS CA+LG L++G+ +H ++L++ R + FL TGLVD YAKCG + A E+FE+
Sbjct: 218 ALAAVLSCCAQLGALDKGREVHGLVKLSRPRPNVFLCTGLVDLYAKCGCVEAAREMFEAC 277
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
Q++N++TWNA++VGLAM+G G ++L YF RM+ I+PDG HAGLVD AR
Sbjct: 278 QDRNVYTWNALIVGLAMYGHGTVALEYFHRMVADGIRPDG-----------HAGLVDLAR 326
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++F +MESV+ V +ELKHYGCMADLLGRAGLIEEA+ M++KMPM GD +VW G+L GCR+
Sbjct: 327 RIFHDMESVHNVPRELKHYGCMADLLGRAGLIEEAMNMVRKMPMEGDNYVWGGILAGCRM 386
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGNVE AE AA H+++L P+D GVY +A +YA A RWEDVV+IR+ +D +++N CS
Sbjct: 387 HGNVEAAELAARHLLQLNPDDSGVYSAMAGIYAAAGRWEDVVRIRKLMDERIVRRNVACS 446
Query: 485 LI 486
I
Sbjct: 447 SI 448
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 123/320 (38%), Gaps = 52/320 (16%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
T ++ A +F +P S+ T+I A+ LF +M PD +
Sbjct: 162 NTGSVAVAREVFEGMPVRDATSWGTVIAGSAKAGQLEEAMALFDRMLEEGFRPDDVALAA 221
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L C+QL + + +H V KL R R +
Sbjct: 222 VLSCCAQLGALDKGREVHGLV-KLS-------------------RPRP-----------N 250
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V C L+D Y K G + AR++F+ R+ +W L+ G A A++ F M+
Sbjct: 251 VFLCTGLVDLYAKCGCVEAAREMFEACQDRNVYTWNALIVGLAMYGHGTVALEYFHRMVA 310
Query: 237 LDIKPDNIALVSALSACAR--LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
I+PD A L AR ++E N+ R EL + D + G I
Sbjct: 311 DGIRPDGHA---GLVDLARRIFHDMESVHNVPR--ELKHYGC-------MADLLGRAGLI 358
Query: 295 NTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
A+ + E + + W +L G MHG + + +++ + PD + A+ G
Sbjct: 359 EEAMNMVRKMPMEGDNYVWGGILAGCRMHGNVEAAELAARHLLQ--LNPDDSGVYSAMAG 416
Query: 354 C-SHAGLVDEA---RKLFDE 369
+ AG ++ RKL DE
Sbjct: 417 IYAAAGRWEDVVRIRKLMDE 436
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/485 (38%), Positives = 294/485 (60%), Gaps = 11/485 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++RC +K++ QIH L KG TI +T + S + L+Y
Sbjct: 16 LLERCSNMKELMQIHGQLLKKG-----------TIRNQLTVSTLLVSYARIELVNLAYTR 64
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F++I P+T +NT++RA++ + P A++L+ QM S+P + Y+FPFLL+ACS L
Sbjct: 65 VVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALS 124
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ Q IH+ ++K GF +V+ NSL+ VY + ++ A LF+++ RD+VS N +ID
Sbjct: 125 AFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMID 184
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY+K G+L A ++F MP ++ +SW T++ G+ + +EA+ L M+ IKPD+I
Sbjct: 185 GYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSIT 244
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
L +LSACA LG LEQGK IH YIE N+I++D L L D Y KCG + A+ +F +
Sbjct: 245 LSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLE 304
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+K + W A++ GLA+HG GR +L +F++M +A I P+ +T L CSHAGL +E +
Sbjct: 305 KKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKS 364
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LF+ M SVY + ++HYGCM DL+GRAGL++EA E I+ MP+ + +W LL C++H
Sbjct: 365 LFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLH 424
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
+ E+ + + +++L P+ G Y LA +YA A W VV++R + + + GCS
Sbjct: 425 KHFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSS 484
Query: 486 IQLNG 490
I LNG
Sbjct: 485 ITLNG 489
>gi|116309314|emb|CAH66401.1| OSIGBa0155K12.4 [Oryza sativa Indica Group]
Length = 486
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/429 (45%), Positives = 281/429 (65%), Gaps = 9/429 (2%)
Query: 70 NIPYPSTFSYNTIIRAH-----TLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+P P + +I A+ + +P+ ++LF +S+PP ++ P + A +
Sbjct: 49 TVPAPPHHPHALLILAYARHLASWPRAPIQLLLLFRSSLRLSVPPTRHTLPLAVSAAAAA 108
Query: 125 CSH---SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ LA ++H+ + + V N+L+ +Y A+ +FD + DVVS N
Sbjct: 109 SAGRHLPLALSLHAVAVTRNLLPFPHVSNALISLYARSALPDSARRVFDRMRAPDVVSHN 168
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
L+ GYVKAG L A ++F+ MP RDAVSWGT+VAG A++ + E+A++LF M +P
Sbjct: 169 ALVHGYVKAGRLGLAVRVFEGMPERDAVSWGTVVAGCAKAGRLEKAVRLFDRMRREGYRP 228
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D++AL + LS CA+LG L++G+ +H Y+ + R + +L TG+VD YAKCG + A E+F
Sbjct: 229 DDVALAAVLSCCAQLGALDKGQEVHEYVRRTRPRPNVYLCTGIVDLYAKCGRVEVAREVF 288
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
++ EKN+FTWNA++VGLAMHG G ++L YF RM+ +PDG T LG L+GCSHAGLVD
Sbjct: 289 DACPEKNVFTWNALIVGLAMHGHGTVALDYFDRMLVEGFRPDGTTFLGVLIGCSHAGLVD 348
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
AR++F EM+ +GV +ELKHYGCMADLLGRAGLI+EA+EMI MPM D +VW G+L G
Sbjct: 349 TARRIFYEMQHNHGVPRELKHYGCMADLLGRAGLIDEAMEMISSMPMEADTYVWGGILAG 408
Query: 422 CRIHG-NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+HG NVE AE AA +++L P+DGGVY +A +YA+A RWEDV ++RRS+D +N
Sbjct: 409 CRMHGNNVEFAEVAARRLLELNPDDGGVYSAMAGIYADAGRWEDVARVRRSMDEMVGMRN 468
Query: 481 AGCSLIQLN 489
G S I +
Sbjct: 469 VGRSSIAME 477
>gi|21740620|emb|CAD40778.1| OSJNBb0012E08.2 [Oryza sativa Japonica Group]
Length = 486
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/429 (45%), Positives = 282/429 (65%), Gaps = 9/429 (2%)
Query: 70 NIPYPSTFSYNTIIRAH-----TLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+P P + +I A+ + +P++ ++LF +S+PP ++ P + A +
Sbjct: 49 TVPAPPHHPHALLILAYARHLASWPRAPIHLLLLFRSSLRLSVPPTRHTLPLAVSAAAAA 108
Query: 125 CSH---SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ LA ++H+ + + V N+L+ +Y A+ +FD + DVVS N
Sbjct: 109 SAGRHLPLALSLHAVAVTRNLLPFPHVSNALISLYARSALPDSARRVFDGMRAPDVVSHN 168
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
L+ GYVKAG L A ++F+ MP RDAVSWGT+VAG A++ + E+A++LF M +P
Sbjct: 169 ALVHGYVKAGRLGLAVRVFEGMPERDAVSWGTVVAGCAKAGRLEKAVRLFDRMRREGYRP 228
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D++AL + LS CA+LG L++G+ +H Y+ + R + +L TG+VD YAKCG + A E+F
Sbjct: 229 DDVALAAVLSCCAQLGALDKGQEVHEYVRRTRPRPNVYLCTGIVDLYAKCGRVEVAREVF 288
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
++ EKN+FTWNA++VGLAMHG G ++L YF RM+ +PDG T LG L+GCSHAGLVD
Sbjct: 289 DACPEKNVFTWNALIVGLAMHGHGTVALDYFDRMLVEGFRPDGTTFLGVLIGCSHAGLVD 348
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
AR++F EM+ +GV +ELKHYGCMADLLGRAGLI+EA+EMI MPM D +VW G+L G
Sbjct: 349 TARRIFYEMQHNHGVPRELKHYGCMADLLGRAGLIDEAMEMISSMPMEADTYVWGGILAG 408
Query: 422 CRIHG-NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+HG NVE AE AA +++L P+DGGVY +A +YA+A RWEDV ++RRS+D +N
Sbjct: 409 CRMHGNNVEFAEVAARRLLELNPDDGGVYSAMAGIYADAGRWEDVARVRRSMDEMVGMRN 468
Query: 481 AGCSLIQLN 489
G S I +
Sbjct: 469 VGRSSIAME 477
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/486 (38%), Positives = 294/486 (60%), Gaps = 11/486 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++RC I ++ QIH L KG TI + +T + +++ +S L+YA
Sbjct: 16 SLLERCSNIGELKQIHGQLLKKG-----------TIRHKLTVSRLLTTYASMEFSNLTYA 64
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ I P+T +NT+IRA++ + P A++L+ QM SIP + Y+FPFLL+ACS L
Sbjct: 65 RMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSAL 124
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + IH Q++K GF +V+ NSL+ VY + ++ A LFD + RD+VS NT+I
Sbjct: 125 SALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMI 184
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
DGY+K G++ A ++F MP ++ +SW +++ G+ ++ +EA+ L M+ IKPD I
Sbjct: 185 DGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKI 244
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
L +LSACA LG LEQGK IH YI N+I++D L L+D Y KCG + A+ +F
Sbjct: 245 TLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKL 304
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++K ++TW A++ G A+HG G +L +F++M +A IKP T L CSH GLV+E +
Sbjct: 305 EKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGK 364
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
LF+ M + Y + ++HYGCM DLLGRAG ++EA E ++ MP+ + +W LL C +
Sbjct: 365 SLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHL 424
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H ++E+ + + +++L PE G Y LA ++A A W++ ++R + + GCS
Sbjct: 425 HKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCS 484
Query: 485 LIQLNG 490
I LNG
Sbjct: 485 TITLNG 490
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/484 (40%), Positives = 293/484 (60%), Gaps = 10/484 (2%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++RC +++ QIHA L GL+ S YAIT F SS ++D L YA
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDS---------YAITKFLSFC-ISSTSSDFLPYAQI 70
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ P TF +N +IR + P +++L+ +M S P + Y+FP LL+ACS L +
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
IH+Q+ KLG+ DV+ +NSL++ Y V + A LFD I D VS N++I G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YVKAG + A LF +M ++A+SW T+++GY Q+D +EA+QLF M + D++PDN++L
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ALSACA+LG LEQGK IH Y+ +IR+DS L L+D YAKCG + A+E+F++ ++
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K++ W A++ G A HG GR ++ F M + IKP+ +T L CS+ GLV+E + +
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F ME Y + ++HYGC+ DLLGRAGL++EA I++MP+ + +W LL CRIH
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N+E+ E E ++ + P GG Y A+++A +W+ + RR + + K GCS I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 487 QLNG 490
L G
Sbjct: 491 SLEG 494
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF---YAKCGYINTAIEIFE 302
L +S R + E+ K IH + + DS+ T + F ++ A +F+
Sbjct: 14 LYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFD 73
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ F WN M+ G + SL+ + RM+ + + T L CS+ +E
Sbjct: 74 GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
++ ++ + G ++ + + G + A + ++P DV W+ ++ G
Sbjct: 134 TTQIHAQITKL-GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV-SWNSVIKGY 191
Query: 423 RIHGNVEIA 431
G ++IA
Sbjct: 192 VKAGKMDIA 200
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 306/554 (55%), Gaps = 81/554 (14%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+++CKTI+ +++IHAH L K L L P + +L + P S + YA+S
Sbjct: 31 LEQCKTIRDLNEIHAH-LIKTRLLLKP-KVAENLLESAAILLPTS---------MDYAVS 79
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF I P + +YN +IR TL SP A++LF +M S+ PD ++FP +L+ CS+L +
Sbjct: 80 IFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQA 139
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------------------------- 157
S + IH+ ++K GF FV N+L+H+Y
Sbjct: 140 LSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAG 199
Query: 158 ------------VFHRLRDAQELFDEILYRDVVSC------------------------- 180
+FH + + FDE+ V++
Sbjct: 200 YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGN 259
Query: 181 ----NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
+L+D Y K G + AR+LFD+M RD V+W +++GY+Q+ +C EA+ LF M
Sbjct: 260 PTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQK 319
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+I P+ I +VS LS+CA LG LE GK +H +I+ ++++ L T L+DFYAKCG + +
Sbjct: 320 ANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVES 379
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+IE+F KN+ +W ++ GLA +G G+ +L YF M+E ++P+ VT +G L CSH
Sbjct: 380 SIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSH 439
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGLVDE R LF M +G+ ++HYGCM D+LGRAGLIEEA + IK MP+ + +W
Sbjct: 440 AGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWR 499
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C++H NVEI E + + ++ L+P G Y +L+++YA+ RWED +K+R +
Sbjct: 500 TLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKG 559
Query: 477 IKKNAGCSLIQLNG 490
IKK GCSLI+L+G
Sbjct: 560 IKKTPGCSLIELDG 573
>gi|242072866|ref|XP_002446369.1| hypothetical protein SORBIDRAFT_06g014910 [Sorghum bicolor]
gi|241937552|gb|EES10697.1| hypothetical protein SORBIDRAFT_06g014910 [Sorghum bicolor]
Length = 474
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/389 (48%), Positives = 270/389 (69%), Gaps = 8/389 (2%)
Query: 105 VSIPPDFYSFPFLLRACSQLCSHS-----LAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
VS+ P +S P + A + S LA ++H+ + + V N+L+ +Y
Sbjct: 85 VSVAPTRHSLPLAVSAAAAASSAGRRHLGLAISLHAVAVARNLLPSPHVANALVSLY-AR 143
Query: 160 HRLRDA-QELFDEILYR-DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
H L DA + +F+E+ DVVS N L+ YV AG + AR++F+ MP RDA SWGT++AG
Sbjct: 144 HALPDAARRVFEEMPSAPDVVSYNALMHAYVNAGRVGVAREVFEEMPVRDATSWGTVIAG 203
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
A++ + EEA+ LF M + +PD++ALV+ LS CA+LG L++G+ +H YI+L++ +
Sbjct: 204 CAKAGRLEEAVLLFDRMREEGFRPDSVALVAVLSCCAQLGALDKGQEVHEYIKLSRTSPN 263
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
FL TGLVD YAKCG + A E+FE+ Q++N+FTWNA++VGLAMHG G ++L YF++M+
Sbjct: 264 VFLCTGLVDLYAKCGCVEEAREVFEACQDRNVFTWNALIVGLAMHGHGTVALEYFNQMLA 323
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
I+ DGVT LG L+ CSH GLVD AR++F +MES + V +ELKHYGCMADLLGRAGLIE
Sbjct: 324 DGIQSDGVTFLGVLIACSHNGLVDMARRIFSDMESKHNVHRELKHYGCMADLLGRAGLIE 383
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
EA++M++KMPM GD +VW G+L GCR+H NVE AE AA H+++L P+D GVY +A +YA
Sbjct: 384 EAMDMVRKMPMEGDSYVWGGILAGCRMHRNVEAAEVAAWHLLELNPDDSGVYSAMAGIYA 443
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+ RWEDV +IR +D ++N GCS +
Sbjct: 444 DVGRWEDVTRIRMLMDENIGRRNVGCSSV 472
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/512 (38%), Positives = 298/512 (58%), Gaps = 43/512 (8%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+ C TI + QIHA + KG F S L ++YA +S + ++YA +
Sbjct: 21 RSCTTIGTLKQIHASMIVKG--FNSNTSALRELIYA---------SSIAISGTMAYAHQL 69
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F +I P TF +NT+IR SPLNA+ L+SQM + PD ++FPF+L+AC++LC
Sbjct: 70 FPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWV 129
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLM--HVYC----VFHRLRD----------------- 164
+ +H +V +LGF + FV N+L+ H C V L D
Sbjct: 130 KMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGY 189
Query: 165 --------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
A++LFDE+ +D+VS N +I GY K G++ AR+LFD +P RD V+W ++A
Sbjct: 190 ARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIA 249
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIR 275
GY ++A+++F M + PD + ++S LSAC LG+L+ G+ IH I E+
Sbjct: 250 GYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRD 309
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L L+D YAKCG I A+E+F+ +EK++ TWN++L GLA HG S+ F+ M
Sbjct: 310 LSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEM 369
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
+ +I+PD +T +G LV CSHAG V+E R+ FD M Y + ++HYGCM DLLGRAGL
Sbjct: 370 RKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGL 429
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+ EA + I M + + VW LLG CRIHGNVE+ A ++K++ ++ G Y +L+++
Sbjct: 430 LNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNI 489
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
YA+ W+ V K+R+ +D ++K AGCSLI+
Sbjct: 490 YASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 521
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/503 (40%), Positives = 305/503 (60%), Gaps = 30/503 (5%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
IK CK+++++ Q+HA + G T AI T SA+S D + YALS
Sbjct: 22 IKACKSMRELKQVHAFLVKTG----------QTHDNAIATEILRLSATSDFRD-IGYALS 70
Query: 67 IFNNIPYPSTFSYNTIIRA-HTLFSSPLNAVVLFSQMRT-VSIPPDFYSFPFLLRACSQL 124
+F+ +P + F++NT+IRA L+A+++F QM + ++ P+ ++FP +L+AC+ +
Sbjct: 71 VFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVM 130
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF-------DEI--LYR 175
+ + +H +LK G + D FV+ +L+ +Y + + DA LF D++ L R
Sbjct: 131 ARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVR 190
Query: 176 D-------VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
D VV CN ++DGY + G+L AR+LFDRM R VSW +++GYAQ+ +EAI
Sbjct: 191 DERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAI 250
Query: 229 QLFCNMMDL-DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
++F MM + D+ P+ + LVS L A +RLG LE GK +H Y E N+IR+D L + LVD
Sbjct: 251 EIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDM 310
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
YAKCG I AI++FE + N+ TWNA++ GLAMHG Y SRM + I P VT
Sbjct: 311 YAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTY 370
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
+ L CSHAGLVDE R F++M + G+ +++HYGCM DLLGRAG +EEA E+I MP
Sbjct: 371 IAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMP 430
Query: 408 MGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
M D +W LLG ++H N++I AAE +M++ P D G Y L+++YA++ W+ V
Sbjct: 431 MKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAA 490
Query: 468 IRRSLDAGKIKKNAGCSLIQLNG 490
+R + I+K+ GCS I+++G
Sbjct: 491 VRLMMKDMDIRKDPGCSWIEIDG 513
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/481 (39%), Positives = 292/481 (60%), Gaps = 12/481 (2%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CKT++ + Q+HA +T SP + SA SP L+YA +IF+
Sbjct: 77 CKTLRHLKQVHAQIITH---HNSPFQLSALAS---------LSALSPFPTFLAYAKTIFH 124
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
++ P YN++IRA + +PL A+ L+ M + PD ++PF+++AC++
Sbjct: 125 HLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWF 184
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+H+ V+K GF CD ++++SL+H+Y L A++LF+ RDVVS N +IDGYVK
Sbjct: 185 GLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVK 244
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
++ HAR +FDRM RD +SW T++ GYA + EA+ LF M + +KP +VS
Sbjct: 245 HVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSL 304
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSACA LG L++G ++H YI N+I V+S + T LVD YAKCG I+ A ++F + + K++
Sbjct: 305 LSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDV 364
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
WN ++ G+A+HG + + F M EA ++P+ +T + L CSHAG+VDE +KL D
Sbjct: 365 LAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDC 424
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M S YG+ +++HYGC+ DLL RAG +EEA+E+I MPM + LLGGCRIHGN E
Sbjct: 425 MSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 484
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ E + ++ L+P G Y +L+++YA A +W+D K+R + I K G S+I+L
Sbjct: 485 LGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELK 544
Query: 490 G 490
G
Sbjct: 545 G 545
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/466 (41%), Positives = 280/466 (60%), Gaps = 32/466 (6%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFP 115
+ + L YA S+F+ IP P TF +NT+IRA+ +P ++ LF QMR IP D YS
Sbjct: 50 SANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLS 109
Query: 116 FLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ--------- 166
+++AC +L Q +H+QVLK+G D+FV +L+ +Y F + A+
Sbjct: 110 LVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHP 169
Query: 167 ----------------------ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
+LFD + RD+VS NT+I G+ GD+ A++LFDR
Sbjct: 170 DLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTC 229
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RD +SW +++A YA++ Q EA++LF M ++ PD + +VS LSAC +G L GK
Sbjct: 230 ERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKM 289
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
IH IE N+I +D L T LVD YAKCG I+ ++ +F +++F W+AM++GLA HG
Sbjct: 290 IHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGF 349
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
G L+L +FS+MI IKP+ VT +G L CSH GLVDE F M VY VS +++HYG
Sbjct: 350 GELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYG 409
Query: 385 CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
C+ D+LGRAG ++EA+E+IK MP D VW LLG CRI+ NVEIAE A ++++L+P
Sbjct: 410 CVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPH 469
Query: 445 DGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
G Y +L+++Y+ A W+ VV +RR + I+K G S I+++
Sbjct: 470 VDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDN 515
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/495 (40%), Positives = 300/495 (60%), Gaps = 19/495 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
T +K+ ++ QI QIHA +T GL +L ++++ + L
Sbjct: 57 TFVQLLKKRPSLTQIKQIHAQVVTHGLA--QNTSLLGPLIHSYIGCRN-----------L 103
Query: 62 SYALSIFNNIP-YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP--PDFYSFPFLL 118
S+A +F+ P P T +N +I+A++ S ++ LF QM P D Y+F F+
Sbjct: 104 SFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVF 163
Query: 119 RACSQLCS-HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
ACS+ + + +H V+K G+ D+FV NSL+++Y +F R+ DA+ +FDE+ RDV
Sbjct: 164 TACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDV 223
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
++ +++ GY G+L AR+LFD MP R+ VSW +VAGY EA+Q F +M+
Sbjct: 224 ITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCH 283
Query: 238 D-IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
D +KP+ LVS LSACA LG L+QGK IH YI+ N+I + S +ST L+D YAKCG I+
Sbjct: 284 DEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDC 343
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A +F+ +++L TW +M+ GL+MHGLG L FS M+ KPD +T+LG L GCSH
Sbjct: 344 ARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSH 403
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLV+E +F +M ++G+ +L+HYGC+ DLLGRAG +E A E IK MPM DV W
Sbjct: 404 SGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWR 463
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKP-EDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL CRIHG+V++ E H+ +L P GG Y +L+++YA+ +WE V K+R+++
Sbjct: 464 ALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQR 523
Query: 476 KIKKNAGCSLIQLNG 490
+ GCS I+++G
Sbjct: 524 GSEGCPGCSWIEIDG 538
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/478 (39%), Positives = 285/478 (59%), Gaps = 11/478 (2%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C T+ ++ Q H+ + GL + + F IS + L+YAL +F+
Sbjct: 30 CSTMAELKQYHSQIIRLGL------SADNDAMGRVIKFCAISKSGD-----LNYALEVFD 78
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
IP+P + YNTI R + + N + ++S+M S+ P+ +++P L+RAC +
Sbjct: 79 KIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEE 138
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ IH+ VLK GF D F LN+L+H+Y F L A+ +FD + RDVVS +LI GY +
Sbjct: 139 GKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQ 198
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G + AR++F+ MP R++VSW ++A Y QS++ EA LF M ++ D S
Sbjct: 199 WGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASM 258
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSAC LG LEQGK IH YIE + I +DS L+T ++D Y KCG + A E+F +K +
Sbjct: 259 LSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGI 318
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+WN M+ GLAMHG G ++ F M + PDG+T + L C+H+GLV+E + F
Sbjct: 319 SSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQY 378
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M V G+ ++H+GCM DLLGRAGL+EEA ++I +MP+ D V L+G CRIHGN E
Sbjct: 379 MTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTE 438
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+ E + V++L+P + G Y +LA++YA+A RWEDV K+R+ ++ +KK G S+I+
Sbjct: 439 LGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 496
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/494 (39%), Positives = 301/494 (60%), Gaps = 21/494 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I RCKT + + QIHAHF+ G I + + + + + T + YA
Sbjct: 22 ISRCKTTRHLKQIHAHFIKTG-----------QIHHPLAAAELLKFLTLSTQREIKYARK 70
Query: 67 IFNNIPYPSTFSYNTIIRA------HTLFS-SPLNAVVLFSQMRTVS-IPPDFYSFPFLL 118
F+ I +P+ FS+NTIIRA LF + L A++ FS M T + P+ ++FP +L
Sbjct: 71 FFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVL 130
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDV 177
+AC++L + +H V+KLG + D FV ++L+ VY + ++DA LF + L +V
Sbjct: 131 KACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNV 190
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V N +IDGYV+ GDL +R+LFD MP + VSW +++G AQ+ +EAI++F +M
Sbjct: 191 VLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLG 250
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
D+ P+ + LVS L A +RLG +E GK +H + E N+I +D L + L+D Y+KCG I+ A
Sbjct: 251 DVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKA 310
Query: 298 IEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+++FE +KN TW+A++ GLAMHG R +L +F RM +A + P V +G L CSH
Sbjct: 311 VQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSH 370
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGLV+E R ++ M ++ G+ ++HYGCM DLLGRAG +EEA ++I MP+ D +
Sbjct: 371 AGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILK 430
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG C++HGN+E+ E A+ +M P D G Y L++++A+ WE VVK+R +
Sbjct: 431 ALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELD 490
Query: 477 IKKNAGCSLIQLNG 490
I+K+ GCS I+L+G
Sbjct: 491 IRKDPGCSWIELDG 504
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/518 (37%), Positives = 302/518 (58%), Gaps = 42/518 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+F +R K++ +I Q HA L GL F + +A A++P +SYA
Sbjct: 14 SFTERAKSLLEIQQAHAFMLKTGL-FHDTFSASKLVAFA---------ATNPEPKTVSYA 63
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SI N I P+ F++N++IRA+ S+P A+ +F +M + PD YSF F+L+AC+
Sbjct: 64 HSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAF 123
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRL------------ 162
C + IH +K + DVFV N+L++VY V R+
Sbjct: 124 CGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 183
Query: 163 ---------RDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
+A+ LFDE+ R+V S N +I GY AG + AR++FD MP +D VSW
Sbjct: 184 SAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNA 243
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDI-KPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+V YA E +++F M+D +PD LV+ LSACA LG L QG+ +H YI+ +
Sbjct: 244 MVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKH 303
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
I ++ F++T LVD Y+KCG I+ A+E+F + ++++ TWN+++ GL++HGLG+ +L F
Sbjct: 304 GIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIF 363
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
S M+ KP+G+T +G L C+H GL+D+ARKLF+ M SVYG+ ++HYGCM DLLGR
Sbjct: 364 SEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGR 423
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVL 452
G EEA E++ ++P + LLG C+ G +E AE A +++ P + Y +
Sbjct: 424 MGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQM 483
Query: 453 ADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++YA+ RW++ +++R + A ++KKN GCS+I+++G
Sbjct: 484 SNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDG 521
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 288/488 (59%), Gaps = 10/488 (2%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+ N RC +++ QIHA L GL+ S YAIT F SS ++D L
Sbjct: 46 MPNTETRCSKQEELKQIHARMLKTGLIQDS---------YAITKFLSCC-ISSTSSDFLP 95
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA +F+ P TF +N +IR + P +++L+ +M S P + Y+FP LL+ACS
Sbjct: 96 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACS 155
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + IH+Q+ KLG+ DV+ +NSL++ Y + A LFD I D VS N+
Sbjct: 156 NLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNS 215
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I GY KAG + A LF +M ++A+SW T+++GY Q+ +EA+QLF M + D++PD
Sbjct: 216 VIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPD 275
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
N++L +ALSACA+LG LEQGK IH Y+ +IR+DS L L+D YAKCG + A+E+F+
Sbjct: 276 NVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFK 335
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ Q K++ W A++ G A HG GR ++ F M + IKP+ +T L CS+ GLV+E
Sbjct: 336 NIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEE 395
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ +F ME Y + ++HYGC+ DLL RAGL++EA I++MP+ + +W LL C
Sbjct: 396 GKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 455
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIH N+E+ E E ++ + P GG Y A+++A +W+ + RR + + K G
Sbjct: 456 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPG 515
Query: 483 CSLIQLNG 490
CS I L G
Sbjct: 516 CSTISLEG 523
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/483 (39%), Positives = 287/483 (59%), Gaps = 12/483 (2%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ CKT+K + QIHA +T G+ S + + IL +F +S S + YA
Sbjct: 42 LSSCKTLKDLTQIHAQTITTGIF--SDNFVASRIL----SFAALSPHGS-----IPYARF 90
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQLC 125
+F I P F NT+IRA+ +P++AVV +S+M S+ PD ++FP LL+ACS++
Sbjct: 91 LFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIP 150
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S L + IHS V KLG+ +V V N L+ +Y + A +FD D S N +I
Sbjct: 151 SLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIG 210
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY+K G AR++F+ MP RD VSW ++ GY Q + +E + LF +MM I+P+
Sbjct: 211 GYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESV 270
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LV+ALSACA LG +EQG+ I RY+E +R+ L T L+D Y+KCG + A+E+F +
Sbjct: 271 LVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMK 330
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
EKN+ W+AM+ GLA++G G+ +L FS+M +KP+ VT +G L CSH+ LVDE
Sbjct: 331 EKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCS 390
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F M S+YG+ H+ CM DL GRAG++++A +IK MP + +W LL CRIH
Sbjct: 391 FFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIH 450
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+ E+ E + +++L P GG Y +L+++YA RW+ V ++RR + ++ K GCS
Sbjct: 451 GDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSF 510
Query: 486 IQL 488
I L
Sbjct: 511 IDL 513
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 299/486 (61%), Gaps = 11/486 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + +C T+ I QI +H G LF P + IS + +S+A
Sbjct: 18 SLLDQCVTMAHIKQIQSHLTVSGTLF-DP----------FAAGRIISFCAVSAQGDISHA 66
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F ++P ++F +NT++RA T P + L+ M + P+ Y+F FLL+AC+QL
Sbjct: 67 YLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQL 126
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S +H+Q ++LG+ FV N L+H+Y + + A+ LFD + RDVV+ +I
Sbjct: 127 SDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVI 186
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
+GY K+G + ARQLFD MP ++AVSW ++ GYAQ EA++LF +M +P++
Sbjct: 187 NGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHG 246
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
A+V AL+ACA LG L+QG+ IH Y++ N++ +D L T L+D YAKCG + TA +F+
Sbjct: 247 AIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEM 306
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++++F + +++ GLA HG ++ F+RM + P+ VT + L CS GLV+E
Sbjct: 307 LDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGL 366
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++F M ++YG+ ++HYGC+ DLLGRAG++E+A ++++MP+ D +V LL CR+
Sbjct: 367 RIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRV 426
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HG+VE+ + E + + + GGV+ +L+++YA+A++WEDV K+R+ ++ K+KK GCS
Sbjct: 427 HGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCS 486
Query: 485 LIQLNG 490
LI+++G
Sbjct: 487 LIEVDG 492
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/488 (38%), Positives = 298/488 (61%), Gaps = 20/488 (4%)
Query: 8 KRCKTIKQIHQIHAHFLTKGL----LFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
K C T+K + +IHAH L GL L +SP + F A+SP D ++Y
Sbjct: 32 KHCTTMKDLQKIHAHLLKTGLAKHPLAVSP----------VLAF----CATSPGGD-INY 76
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACS 122
A +F I P+ FS+NTIIR + S+P +A+ LF M VS + P ++P + +A +
Sbjct: 77 AYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYA 136
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
QL +H +V+KLG D F+ N+++++Y L + + F E + D+V+ N+
Sbjct: 137 QLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNS 196
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I G K G++ +R+LFD MP R+ VSW ++++GY ++ + EA+ LF M + IKP
Sbjct: 197 MIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPS 256
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+VS L+A ARLG L+QG+ IH YI N ++ ++ ++D Y KCG I A ++FE
Sbjct: 257 EFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFE 316
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ K L +WN M++GLAM+G ++ FSR+ + ++PD VT +G L C+++GLVD+
Sbjct: 317 MAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDK 376
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
A++ F M Y + +KHY CM D LGRAGL+EEA E+I+ MP+ D +WS LL C
Sbjct: 377 AKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSAC 436
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R HGNVE+A+ AA+H++ L D Y +L+++YA +D++E+ ++ R S+ +I+K G
Sbjct: 437 RKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPG 496
Query: 483 CSLIQLNG 490
CSLI++NG
Sbjct: 497 CSLIEVNG 504
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 297/486 (61%), Gaps = 13/486 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +++C+T+ QI Q+H+H + + + L K IS + + +S+A
Sbjct: 15 SLLEQCRTMSQIKQMHSHLI-----------VSASRLDPFAAGKIISLFAVSSNADISHA 63
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F ++P+ +TF +NTIIR + A+ L+ M P+ Y+F F+LRAC+
Sbjct: 64 YKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDN 123
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
LA H+QV+KLG+ FVLN L+H+Y + + A++LFD RDV++ LI
Sbjct: 124 SPVGLAS--HAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALI 181
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
+GYVK+G + AR+LFD+MP R+ VSW ++ GY EA++LF ++ ++P++
Sbjct: 182 NGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHA 241
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V AL+AC+ LG L+ G+ IH Y++ N +D L T LVD YAKCG I A +FE
Sbjct: 242 GIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKM 301
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+K+ F + +++ GLA HG ++ F RM ++ P+ VT + L CS GLVDE
Sbjct: 302 PDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGL 361
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++F+ M VYG+ ++HYGCM DLLGRAGL+EEA ++++MPM D +V LL CR+
Sbjct: 362 RIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRV 421
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HG+VE+ + E +++ + GGV+ +L+++YA++++W+ VVK+R+ + A K+KK GCS
Sbjct: 422 HGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPGCS 481
Query: 485 LIQLNG 490
I+++G
Sbjct: 482 SIEIDG 487
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 286/484 (59%), Gaps = 9/484 (1%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C + + IHA+ + HI+ + +A + S T + YA
Sbjct: 24 LETCSDLTHLKIIHAYMIR--------THIICDV-FAASRLIAFCVDPSSGTSLIDYASR 74
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF+ I P+ F +N +IR H+ +P A + Q + + PD +FPFL+++C++L
Sbjct: 75 IFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHC 134
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S+ H ++K GF DV+V NSL+H+Y F A +F + Y DVVS ++I G
Sbjct: 135 ISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRG 194
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
+ K GD+ AR+LFD+MP ++ V+W T+++GYAQ++ ++A++LF + ++ + +
Sbjct: 195 FNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVM 254
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS +S+CA LG LE G+ H Y+ N + ++ L T LVD YA+CG I+ A+ +FE E
Sbjct: 255 VSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPE 314
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ +W A++ GLAMHG SL YF+ M+EA + P +T L CSH GLV+ ++
Sbjct: 315 RDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQI 374
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F+ M+ + V L+HYGCM DLLGRAG +EEA + KMP+ + VW LLG CRIH
Sbjct: 375 FESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHK 434
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N EI E + +++L P+ G Y +L+++YANA WE V ++R+ + A +KK G SLI
Sbjct: 435 NAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLI 494
Query: 487 QLNG 490
+L+G
Sbjct: 495 ELDG 498
>gi|125548143|gb|EAY93965.1| hypothetical protein OsI_15743 [Oryza sativa Indica Group]
gi|125590256|gb|EAZ30606.1| hypothetical protein OsJ_14659 [Oryza sativa Japonica Group]
Length = 328
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/315 (54%), Positives = 232/315 (73%), Gaps = 1/315 (0%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
DVVS N L+ GYVKAG L A ++F+ MP RDAVSWGT+VAG A++ + E+A++LF M
Sbjct: 5 DVVSHNALVHGYVKAGRLGLAVRVFEGMPERDAVSWGTVVAGCAKAGRLEKAVRLFDRMR 64
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+PD++AL + LS CA+LG L++G+ +H Y+ + R + +L TG+VD YAKCG +
Sbjct: 65 REGYRPDDVALAAVLSCCAQLGALDKGQEVHEYVRRTRPRPNVYLCTGIVDLYAKCGRVE 124
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A E+F++ EKN+FTWNA++VGLAMHG G ++L YF RM+ +PDG T LG L+GCS
Sbjct: 125 VAREVFDACPEKNVFTWNALIVGLAMHGHGTVALDYFDRMLVEGFRPDGTTFLGVLIGCS 184
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAGLVD AR++F EM+ +GV +ELKHYGCMADLLGRAGLI+EA+EMI MPM D +VW
Sbjct: 185 HAGLVDTARRIFYEMQHNHGVPRELKHYGCMADLLGRAGLIDEAMEMISSMPMEADTYVW 244
Query: 416 SGLLGGCRIHG-NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
G+L GCR+HG NVE AE AA +++L P+DGGVY +A +YA+A RWEDV ++RRS+D
Sbjct: 245 GGILAGCRMHGNNVEFAEVAARRLLELNPDDGGVYSAMAGIYADAGRWEDVARVRRSMDE 304
Query: 475 GKIKKNAGCSLIQLN 489
+N G S I +
Sbjct: 305 MVGMRNVGRSSIAME 319
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 40/325 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A+ +F +P S+ T++ AV LF +MR PD + +L
Sbjct: 22 LGLAVRVFEGMPERDAVSWGTVVAGCAKAGRLEKAVRLFDRMRREGYRPDDVALAAVLSC 81
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL + Q +H V + +V++ ++ +Y R+ A+E+FD ++V +
Sbjct: 82 CAQLGALDKGQEVHEYVRRTRPRPNVYLCTGIVDLYAKCGRVEVAREVFDACPEKNVFTW 141
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LI G G A FDRM LV G+ +
Sbjct: 142 NALIVGLAMHGHGTVALDYFDRM----------LVEGF---------------------R 170
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD + L C+ G ++ + I ++ N G + D + G I+ A+E
Sbjct: 171 PDGTTFLGVLIGCSHAGLVDTARRIFYEMQHNHGVPRELKHYGCMADLLGRAGLIDEAME 230
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHGLG-RLSLVYFSRMIEARIKPDGVTILGALVGC-SH 356
+ S E + + W +L G MHG + V R++E + PD + A+ G +
Sbjct: 231 MISSMPMEADTYVWGGILAGCRMHGNNVEFAEVAARRLLE--LNPDDGGVYSAMAGIYAD 288
Query: 357 AGL---VDEARKLFDEMESVYGVSK 378
AG V R+ DEM + V +
Sbjct: 289 AGRWEDVARVRRSMDEMVGMRNVGR 313
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/503 (36%), Positives = 293/503 (58%), Gaps = 28/503 (5%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CK++ + QIH+ + G+ I I K +S S + YA
Sbjct: 19 SLFETCKSMYHLKQIHSRTIKTGI-----------ICNPIIQNKILSFCCSREFGDMCYA 67
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ IP PS FS+N + + ++ + P V L+ +M ++ PD Y++PFL + ++
Sbjct: 68 RQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRS 127
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ L + +H V+K G +VF N+L+++Y + + A+ +FD DVV+ N +I
Sbjct: 128 VALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMI 187
Query: 185 DGY-----------------VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
GY V G + AR+ F +MP RD VSW ++ GY + + +EA
Sbjct: 188 SGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEA 247
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+ LF M IKPD +VS L+ACA+LG LE G+ I YI+ N+++ D+F+ L+D
Sbjct: 248 LMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDM 307
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y KCG + A+ IF + +++ FTW AM+VGLA++G G +L FS+M++A + PD VT
Sbjct: 308 YFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTY 367
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
+G L C+H G+VDE +K F M + +G+ + HYGCM DLLG+AG ++EA E+IK MP
Sbjct: 368 VGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMP 427
Query: 408 MGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
M + VW LLG CRIH + E+AE A E +++L+P +G VY + ++YA ++W+ + +
Sbjct: 428 MKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRE 487
Query: 468 IRRSLDAGKIKKNAGCSLIQLNG 490
+R+ + IKK GCSLI++NG
Sbjct: 488 LRQVMMDRGIKKTPGCSLIEMNG 510
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/470 (39%), Positives = 281/470 (59%), Gaps = 32/470 (6%)
Query: 50 ISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP 109
I ++S + ++YA +F +I P TF +NT+IR SPLNA+ L+SQM + P
Sbjct: 17 IYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRP 76
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLM--HVYC----VFHRLR 163
D ++FPF+L+AC++LC + +H +V +LGF + FV N+L+ H C V L
Sbjct: 77 DKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALF 136
Query: 164 D-------------------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
D A++LFDE+ +D+VS N +I GY K G++ AR+
Sbjct: 137 DGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARK 196
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
LFD +P RD V+W ++AGY ++A+++F M + PD + ++S LSAC LG+
Sbjct: 197 LFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGD 256
Query: 259 LEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
L+ G+ IH I E+ + L L+D YAKCG I A+E+F+ +EK++ TWN++L
Sbjct: 257 LDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLG 316
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GLA HG S+ F+ M + +I+PD +T +G LV CSHAG V+E R+ FD M Y +
Sbjct: 317 GLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIE 376
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
++HYGCM DLLGRAGL+ EA + I M + + VW LLG CRIHGNVE+ A
Sbjct: 377 PNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQ 436
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
++K++ ++ G Y +L+++YA+ W+ V K+R+ +D ++K AGCSLI+
Sbjct: 437 LLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 486
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 189/484 (39%), Positives = 289/484 (59%), Gaps = 14/484 (2%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C I ++ +IHAH + L LS + L T + + + YA
Sbjct: 14 LRNCPKIAELKKIHAHIVK---LSLSQSNFLVTKMLDLCD----------NLSHVDYATM 60
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLRACSQLC 125
IF + P+ FSYN IIR +T A+ +F+QM T S PD ++FPF++++C+ L
Sbjct: 61 IFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLL 120
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
L Q +H+ V K G N+L+ +Y + A ++++E+ RD VS N+LI
Sbjct: 121 CRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLIS 180
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
G+V+ G + AR++FD MP R VSW T++ GYA+ +A+ +F M + I+PD I+
Sbjct: 181 GHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEIS 240
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
++S L ACA+LG LE GK IH+Y E + ++ + LV+ YAKCG I+ A +F
Sbjct: 241 VISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMI 300
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
EK++ +W+ M+ GLA HG G ++ F M +A + P+GVT +G L C+HAGL +E +
Sbjct: 301 EKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLR 360
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
FD M Y + +++HYGC+ DLLGR+G +E+AL+ I KMPM D W+ LL CRIH
Sbjct: 361 YFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIH 420
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+EIA A E ++KL+PE+ G Y +LA++YA D+WE V +R+ + + +IKK GCSL
Sbjct: 421 HNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSL 480
Query: 486 IQLN 489
I++N
Sbjct: 481 IEVN 484
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 189/501 (37%), Positives = 297/501 (59%), Gaps = 20/501 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL+ I++CK +K+I IH H L +L + L T L +F +S
Sbjct: 21 TLSTLIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYAS--------F 72
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSP------LNAVVLFSQMRTVSIPPDFYSFP 115
+YA ++F+ I YP YN +IR++ A++L+ QM I P+ +FP
Sbjct: 73 NYANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFP 132
Query: 116 FLLRACSQL-CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
FL++ CS+L ++ + IH+ VLK GF+ DVFV NSL+ ++ F ++A+++FDE+
Sbjct: 133 FLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFV 192
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS N+++ GY++ G++ A LF +M R+ ++W +++ G Q+ +E++++F M
Sbjct: 193 RDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEM 252
Query: 235 MDLD----IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
L +KPD I + S LSACA LG ++ GK +H Y+ N I D + T LV+ Y K
Sbjct: 253 QFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGK 312
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
CG + AIEIF EK+ W AM+ A+HG G+ + F M +A +KP+ VT +G
Sbjct: 313 CGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGL 372
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
L CSH+GLV++ R FD M+ VY + ++ HY CM D+L RA L +EAL +I+ MPM
Sbjct: 373 LSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKP 432
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR 470
DV+VW LLGGC++HGN+++ E A +++ L+P + Y L D+Y A +++ +IR
Sbjct: 433 DVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRN 492
Query: 471 SLDAGKIK-KNAGCSLIQLNG 490
S+ I+ K GCS+I++NG
Sbjct: 493 SMKERGIETKIPGCSIIEING 513
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 186/481 (38%), Positives = 287/481 (59%), Gaps = 14/481 (2%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C I Q+ Q+HAH KGL C +L +L +T DP Y +F
Sbjct: 49 CTHINQVKQVHAHIFRKGLE--QCCFVLAKLLRTLTKL-------DVPMDP--YPRLVFQ 97
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ YP+ F + +IR + L + +V+L++ MR I P ++F LL+ACS +L
Sbjct: 98 QVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNL 157
Query: 130 AQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ +H+Q + +G F D++V N+L+ +Y L +FDE+L RDV+S +LI Y
Sbjct: 158 GRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYA 217
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
K G++ A +LFD +P +D V+W +V GYAQ+ + EA+++F M +K D + LV
Sbjct: 218 KVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVG 277
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFESSQE 306
+SACA+LG + + E + S + G L+D YAKCG + A ++FE +E
Sbjct: 278 VISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEE 337
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+N++++++M+VG AMHGL ++ F M++ IKP+ VT +G L CSHAG+V++ ++L
Sbjct: 338 RNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQL 397
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F ME +GV+ HY CM DLLGRAG +EEAL ++K MPM VW LLG CRIHG
Sbjct: 398 FAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHG 457
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N ++A+ AA H+ +L+P G Y +L+++YA+A RW+DV K+R+ + A +KKN GCS +
Sbjct: 458 NPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWV 517
Query: 487 Q 487
+
Sbjct: 518 E 518
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 294/478 (61%), Gaps = 11/478 (2%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+ I QI +H G LF P + IS + +S+A +F ++P
Sbjct: 1 MAHIKQIQSHLTVSGTLF-DP----------FAAGRIISFCAVSAQGDISHAYLLFLSLP 49
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
++F +NT++RA T P + L+ M + P+ Y+F FLL+AC+QL S
Sbjct: 50 RRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGIL 109
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H+Q ++LG+ FV N L+H+Y + + A+ LFD + RDVV+ +I+GY K+G
Sbjct: 110 LHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQ 169
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ ARQLFD MP ++AVSW ++ GYAQ EA++LF +M +P++ A+V AL+A
Sbjct: 170 VVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTA 229
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA LG L+QG+ IH Y++ N++ +D L T L+D YAKCG + TA +F+ ++++F +
Sbjct: 230 CAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAF 289
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
+++ GLA HG ++ F+RM + P+ VT + L CS GLV+E ++F M +
Sbjct: 290 TSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTN 349
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
+YG+ ++HYGC+ DLLGRAG++E+A ++++MP+ D +V LL CR+HG+VE+ +
Sbjct: 350 IYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGK 409
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E + + + GGV+ +L+++YA+A++WEDV K+R+ ++ K+KK GCSLI+++G
Sbjct: 410 ETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDG 467
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 290/490 (59%), Gaps = 17/490 (3%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + + C+++ + QIHAH L L+ H + IL + F +A SP+ D L
Sbjct: 19 LASIAENCQSMNHLKQIHAHSL------LTDLHNHSVILGKMLRF----AAVSPSGD-LP 67
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA +F+ +P P+TF YNTIIR + SSP V LF+QMR + PD ++F FL++A S
Sbjct: 68 YAQRLFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARS 127
Query: 123 QLCS-HSLAQT-----IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
++ H+ T IH V K GF +FV N+L+++Y V A +F+E + D
Sbjct: 128 RVHKVHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVD 187
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
VVS + L+ +V+ G+L ARQ+FD MP +D VSW +V+GY++++ EA++LF M D
Sbjct: 188 VVSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSD 247
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
I+PD + +VS +SAC LG++E G N+H YI N L L++ YAKCG ++
Sbjct: 248 AGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDR 307
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A +F + + K+L TWN+M+ A HG + FS M+ + I PDG+T L L+ +H
Sbjct: 308 AWRVFNNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTH 367
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
GLVDE +LF ME YG+ ++HYGC+ D+LGRAG +EEA E+I MP+ + VW
Sbjct: 368 KGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWG 427
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CRI+G+V + E + +++LKP++GG Y +L D+Y + R + IR+++
Sbjct: 428 ALLAACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESG 487
Query: 477 IKKNAGCSLI 486
KN G S +
Sbjct: 488 AMKNPGYSWV 497
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 296/487 (60%), Gaps = 13/487 (2%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + +K+C +K +HQ H L++GL +IL + + I + SS
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGL---DQDNILLS--------RFIEACSSLGFS--H 90
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
Y+ SIF + P + YNTII+A + A++L++++ + D YS PF+L+A
Sbjct: 91 YSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVV 150
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L + + + IH Q + G + D+ V+ +L+ +Y + +A++LFD + +RDV N
Sbjct: 151 RLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNA 210
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY K GD+ +AR LF+RMP R+ +SW ++AGYAQ D+ EAI +F M +++PD
Sbjct: 211 MVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPD 270
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
IA+++ALSACA LG LE G+ IH YI+ + + L+ L+D YAKCG I A+E+F+
Sbjct: 271 EIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFK 330
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ + K++ TW +M+ GLA+HGLGR +L FS M RIKP+ +T + L C H GLV+
Sbjct: 331 NMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEM 390
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R F M + YG+ +++HYGCM DLLGRAG ++EA E+++ MP + +W LL
Sbjct: 391 GRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAA 450
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIHG+ E+ + A +H++K++P + G Y +L+++YA +W + +R+ + +KK G
Sbjct: 451 RIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPG 510
Query: 483 CSLIQLN 489
S I++N
Sbjct: 511 GSCIEVN 517
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 296/487 (60%), Gaps = 13/487 (2%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + +K+C +K +HQ H L++GL +IL + + I + SS
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGL---DQDNILLS--------RFIEACSSLGFS--H 90
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
Y+ SIF + P + YNTII+A + A++L++++ + D YS PF+L+A
Sbjct: 91 YSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVV 150
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L + + + IH Q + G + D+ V+ +L+ +Y + +A++LFD + +RDV N
Sbjct: 151 RLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNA 210
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY K GD+ +AR LF+RMP R+ +SW ++AGYAQ D+ EAI +F M +++PD
Sbjct: 211 MVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPD 270
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
IA+++ALSACA LG LE G+ IH YI+ + + L+ L+D YAKCG I A+E+F+
Sbjct: 271 EIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFK 330
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ + K++ TW +M+ GLA+HGLGR +L FS M RIKP+ +T + L C H GLV+
Sbjct: 331 NMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEM 390
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R F M + YG+ +++HYGCM DLLGRAG ++EA E+++ MP + +W LL
Sbjct: 391 GRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAA 450
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIHG+ E+ + A +H++K++P + G Y +L+++YA +W + +R+ + +KK G
Sbjct: 451 RIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPG 510
Query: 483 CSLIQLN 489
S I++N
Sbjct: 511 GSCIEVN 517
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/508 (37%), Positives = 294/508 (57%), Gaps = 42/508 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+F +R K++ +I Q HA L GL F + +A A++P +SYA
Sbjct: 44 SFTERAKSLTEIQQAHAFMLKTGL-FHDTFSASKLVAFA---------ATNPEPKTVSYA 93
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SI N I P+ F++N++IRA+ S+P A+ +F +M + PD YSF F+L+AC+
Sbjct: 94 HSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAF 153
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRL--RDA------- 165
C + IH +K G + DVFV N+L++VY V R+ RDA
Sbjct: 154 CGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 213
Query: 166 ------------QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
+ LFDE+ R+V S N +I GY AG + A+++FD MP RD VSW
Sbjct: 214 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 273
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDI-KPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+V YA E +++F M+D KPD LVS LSACA LG L QG+ +H YI+ +
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
I ++ FL+T LVD Y+KCG I+ A+E+F ++ ++++ TWN+++ L++HGLG+ +L F
Sbjct: 334 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 393
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
S M+ KP+G+T +G L C+H G++D+ARKLF+ M SVY V ++HYGCM DLLGR
Sbjct: 394 SEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGR 453
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVL 452
G IEEA E++ ++P + LLG C+ G +E AE A +++L D Y +
Sbjct: 454 MGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQM 513
Query: 453 ADVYANADRWEDVVKIRRSLDAGKIKKN 480
+++YA+ RWE V+ RR++ A ++ ++
Sbjct: 514 SNLYASDGRWEKVIDGRRNMRAERVNRS 541
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/486 (38%), Positives = 296/486 (60%), Gaps = 16/486 (3%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
K C ++K + +IHA + GL I + ++ +SP D ++YA +
Sbjct: 4 KNCTSMKDLQKIHAQLIKTGL-----------AKDTIAASRVLAFCTSPAGD-INYAYLV 51
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS--IPPDFYSFPFLLRACSQL- 124
F I P+ F +NTIIR + S+P NA+ LF M S P ++P + +A +QL
Sbjct: 52 FTQIRNPNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLG 111
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+H AQ +H +V+KLG D F+ N+++++Y L +AQ +FD DVV+ NT+I
Sbjct: 112 LAHEGAQ-LHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMI 170
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
G K G++ +R+LFD+M R+ VSW ++++GY + + EA++LF M + IKP
Sbjct: 171 IGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEF 230
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VS L+ACA LG L QG+ IH YI N ++S + T ++D Y+KCG I+ A+++F+S+
Sbjct: 231 TMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSA 290
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+K L WN++++GLAM G G ++ FS++ + +KPD V+ +G L C+HAG+VD A+
Sbjct: 291 PKKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAK 350
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F M Y + +KHY CM D+LGRAGL+EEA E+IK MP+ D +W LL CR
Sbjct: 351 DYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCRE 410
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+GN+E+A+ AA+ V +L P + + +L++VYA + +E+ ++ R SL ++ K GCS
Sbjct: 411 YGNIEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCS 470
Query: 485 LIQLNG 490
LI++NG
Sbjct: 471 LIEVNG 476
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 189/486 (38%), Positives = 289/486 (59%), Gaps = 16/486 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K C I Q+ +IHAH + L LS + L T + S +SYA
Sbjct: 17 LKNCFKITQLKKIHAHVVK---LSLSQSNFLVTKMLD----------SCDNLGHVSYATL 63
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM---RTVSIPPDFYSFPFLLRACSQ 123
+F + +P+ F+YN IIR + +A+ +F QM T S+ PD ++FPF++++C+
Sbjct: 64 LFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTG 123
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ H L +H V K G N+L+ +Y F L +A ++F+E+ +RDV+S N+L
Sbjct: 124 ILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSL 183
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GYVK G + AR+LFD MP R VSW T++ GY + +A+ +F M + I+PD
Sbjct: 184 IFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDE 243
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I++++ L ACA+LG LE GK IH Y + N + + L++ YAKCG I+ A +F+
Sbjct: 244 ISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQ 303
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
EK++ +W+ M+ GLA HG G ++ F M + R+ P+ +T LG L+ CSH GL DE
Sbjct: 304 LVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEG 363
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
K FD M + Y + E++HYGC+ DLLGR+G + +AL+ I KMP+ D +W+ LL CR
Sbjct: 364 LKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCR 423
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
IH N++IA A + +M+L+PE+ G Y +LA++YA +WEDV IR+ + +IKK G
Sbjct: 424 IHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGS 483
Query: 484 SLIQLN 489
S I++N
Sbjct: 484 SSIEVN 489
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 188/498 (37%), Positives = 289/498 (58%), Gaps = 17/498 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL+ I++CK ++++ + H L L + L T L + +F S
Sbjct: 20 TLSRLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGS--------F 71
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSP-----LNAVVLFSQMRTVSIPPDFYSFPF 116
SYA ++F+ I P +YN +IRA+ S A++L+ QM I P+ +FPF
Sbjct: 72 SYATNVFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPF 131
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
LL+ C+Q + Q IH+QV+K GF+ DV+V NSL+ +Y L +A+++FDE+L D
Sbjct: 132 LLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTD 191
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
VV+ N+++ G ++ G L A LF +M R+ ++W +++ G AQ +E+++LF M
Sbjct: 192 VVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQI 251
Query: 237 LD---IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
L +KPD I + S LSACA+LG ++ GK +H Y+ N I D + T LV+ Y KCG
Sbjct: 252 LSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGD 311
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A EIFE EK+ W M+ A+HGLG + F M +A +KP+ VT +G L
Sbjct: 312 VQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSA 371
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C+H+GLV++ R FD M+ VY + ++ HY CM D+L RA L +E+ +I+ MPM DV+
Sbjct: 372 CAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVY 431
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LLGGC++HGNVE+ E H++ L+P + Y D+YA A ++ +IR +
Sbjct: 432 VWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMK 491
Query: 474 AGKI-KKNAGCSLIQLNG 490
+I KK GCS+I++NG
Sbjct: 492 EKRIEKKIPGCSMIEING 509
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 291/479 (60%), Gaps = 12/479 (2%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+++ ++HAH +T GL H L + T +S ++ L +A +F+ I
Sbjct: 1 MQEAKRLHAHLITSGL------HQQENHLRKLITLY-----TSSSSSSLHHARLLFDAIH 49
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+PST+ YNT+ R + +PL+A++L M PPD Y+FPFLL+ACS L Q
Sbjct: 50 HPSTYLYNTMFRVYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQE 109
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H Q LK G VFV NSL+H+Y + A+ +FD + YRD+ S TL+ Y +
Sbjct: 110 LHCQALKFGLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCS 169
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ AR++FD MP R +S+ ++A Y + ++ EA+ LF + + I+P + ++S L A
Sbjct: 170 VKAARKVFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCA 229
Query: 253 CARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
CA LG L+ G+ ++ Y+ + VDS ++T L+D + KCG I A+ +FE ++EK++
Sbjct: 230 CANLGALDVGRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGE 289
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W AML GLAMHGLG + F +M+++ +KP+GVT + L GCSH+GLV+E FD ME
Sbjct: 290 WTAMLSGLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRME 349
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S +GV ++H+GC+ DLLGRAGLI++A+++I +MP + +W LL CR++ NVEI
Sbjct: 350 SDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIG 409
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E AA+ ++K +P +G +Y L +Y A RW++V K++ + +K GCSLI++ G
Sbjct: 410 ELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGG 468
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 196/497 (39%), Positives = 290/497 (58%), Gaps = 27/497 (5%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CKT++ + Q+HA + K P + + SA S D L YA IF
Sbjct: 21 CKTMQDLKQLHAQMI-KTAQIRDPLAAAELLRF---------SAVSDHRD-LDYARKIFR 69
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCSHS 128
++ P+ FSYNT+IRA + + P +A+++F +M S+ P+ ++FP + +AC +
Sbjct: 70 SMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLR 129
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY-------------- 174
+ +H +K G D FV+++++ +Y + DA LF ++
Sbjct: 130 EGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRV 189
Query: 175 -RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
DVV N +IDGYV+ G+L AR LFD MP R VSW ++AGYAQS +EA+++F
Sbjct: 190 DGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFRE 249
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M ++ P+ + LVS L A +RLG LE GK +H Y N I VD L + L+D YAKCG
Sbjct: 250 MQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGS 309
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
I A+++FE ++N+ TW+ ++ GLAMHG + +L +F M A + P VT +G L
Sbjct: 310 IEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSA 369
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSHAGLV+E R FD M V G+ ++HYGCM DLLGRAGL+EE+ E+I MP+ D
Sbjct: 370 CSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDV 429
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+W LLG C++HGNVE+ + AEH+M+L P D G Y L+++YA+ WE V K+R +
Sbjct: 430 IWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMK 489
Query: 474 AGKIKKNAGCSLIQLNG 490
++K+ GCS I+L+G
Sbjct: 490 EMDVRKDPGCSWIELDG 506
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/486 (38%), Positives = 286/486 (58%), Gaps = 15/486 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+++C T ++ QIHA L GLL P YA+T + ++ SYA
Sbjct: 18 LQKCPTEVELKQIHARMLKSGLL-QDP--------YAMTK----FLSFCLSSSFSSYAHD 64
Query: 67 IF-NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F N P TF +N +IR + P +++L+ +M S P + Y+FPFLL+ACS L
Sbjct: 65 VFFNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLS 124
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH+ + K G+ D++ +NSL++ Y V + A LFD I D VS N++I
Sbjct: 125 AFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIK 184
Query: 186 GYVKAGDLAHARQLFDRMPFRD-AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GYVKAG++ A LF +MP ++ A+SW T+++GY Q+ +EA+QLF M + ++ PDN+
Sbjct: 185 GYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNV 244
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+L SALSAC++LG LEQGK IH Y + R+DS L L+D YAKCG + A+ +F++
Sbjct: 245 SLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNM 304
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+ K++ W A++ G A HGLGR ++ F M +KP+ +T L CS+ GLV+E +
Sbjct: 305 KTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGK 364
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+F+ +E Y + ++HYGCM DLLGRAGL+ EA I+KMP+ + +W LL C+I
Sbjct: 365 SVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQI 424
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H N+E+ E E ++++ GG Y +A+++A +W+ + RR + + K GCS
Sbjct: 425 HKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCS 484
Query: 485 LIQLNG 490
I L G
Sbjct: 485 AISLEG 490
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 293/489 (59%), Gaps = 15/489 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
+L + + C T++ + IHA L F + H +L I F +S L
Sbjct: 184 SLASMAEACLTMQALKLIHA------LAFRANLHHHALVLAKIFRFAAVSPNGC-----L 232
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA +F+ I P+TF YNT+IR ++ SSP +V LF+QMR + PD ++F FLL+
Sbjct: 233 HYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGR 292
Query: 122 SQLCSH----SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
S++ + IH VLKLGF +FV+N+L+H+Y A ++F+E++ DV
Sbjct: 293 SRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADV 352
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VS + L+ +V+AG+L ARQ+F MP RD VSW +V+GYAQ+ + EA++LF M D+
Sbjct: 353 VSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDV 412
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++PD +A+VS +SAC LG+LE G +HRYI+ N L L+D YAKCG ++ A
Sbjct: 413 GVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLA 472
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++F + + K+L TWN+M+ A HG + F+ M+ + I+PDGVT L L +H
Sbjct: 473 WQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHK 532
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
G VD+ LF+ M+ YGV ++HYGCM D+LGRAG +EEA ++I M M + VW
Sbjct: 533 GWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGA 592
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LL CRI+G+VE+ E + +++LKP++GG Y +L D+Y A R + +++RR++D
Sbjct: 593 LLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGA 652
Query: 478 KKNAGCSLI 486
KK GCS +
Sbjct: 653 KKTLGCSWV 661
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 290/479 (60%), Gaps = 13/479 (2%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+++ ++HAH +T GL H L + T + ++ L +A +F+ +
Sbjct: 1 MQEAKRLHAHLITSGL------HQQENHLRKLITLY------TSSSSSLHHARLLFDAVY 48
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+PST+ YNT+ R + +PL+A++L M PPD Y+FPFLL+ACS L Q
Sbjct: 49 HPSTYLYNTMFRVYAASPTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQE 108
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H Q LK G VFV NSL+H+Y R+ A+ +FD + YRD+ S TL+ Y +
Sbjct: 109 LHCQALKFGLGGHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCS 168
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ AR++FD MP R VS+ ++A Y + ++ EA++LF + + I+P + ++S L A
Sbjct: 169 VEAARKVFDEMPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCA 228
Query: 253 CARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
CA LG L+ G+ ++ ++ VDS ++T L+D + KCG I A+ +FE ++EK++
Sbjct: 229 CANLGALDVGRWVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGE 288
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W AML GLAMHGLG + F +M+++ IKPD VT + L GCSH+GLV+E FD ME
Sbjct: 289 WTAMLSGLAMHGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRME 348
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S +GV ++H+GC+ DLLGRAGLI++A+++I +MP + +W LL CR++ NVE+
Sbjct: 349 SDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVG 408
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E AA+ ++K +P +G +Y L +Y A RW++V K++ + +K GCSLI++ G
Sbjct: 409 ELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGG 467
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 193/481 (40%), Positives = 289/481 (60%), Gaps = 15/481 (3%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C T++ + IHA L F + H +L I F +S L YA +F+
Sbjct: 5 CLTMQALKLIHA------LAFRANLHHHALVLAKIFRFAAVSPNGC-----LHYADRLFS 53
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH-- 127
I P+TF YNT+IR ++ SSP +V LF+QMR + PD ++F FLL+ S++
Sbjct: 54 QIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLP 113
Query: 128 --SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH VLKLGF +FV+N+L+H+Y A ++F+E++ DVVS + L+
Sbjct: 114 LIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVV 173
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
+V+AG+L ARQ+F MP RD VSW +V+GYAQ+ + EA++LF M D+ ++PD +A
Sbjct: 174 AHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVA 233
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+VS +SAC LG+LE G +HRYI+ N L L+D YAKCG ++ A ++F + +
Sbjct: 234 MVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME 293
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+L TWN+M+ A HG + F+ M+ + I+PDGVT L L +H G VD+
Sbjct: 294 RKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYG 353
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LF+ M+ YGV ++HYGCM D+LGRAG +EEA ++I M M + VW LL CRI+
Sbjct: 354 LFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIY 413
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+VE+ E + +++LKP++GG Y +L D+Y A R + +++RR++D KK GCS
Sbjct: 414 GDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSW 473
Query: 486 I 486
+
Sbjct: 474 V 474
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 287/507 (56%), Gaps = 45/507 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +++CK+I Q+ QI + + GL I + + I+ + L Y
Sbjct: 55 SLLEKCKSISQLKQIQSQMVLTGL-----------IEDGFASSRLIAFCAISEWRDLDYC 103
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ-MRTVSIPPDFYSFPFLLRACSQ 123
+I N P+TFS+N IR +P AVVL+ + ++ PD Y++P L +AC++
Sbjct: 104 TNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACAR 163
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + I VL LGF D+FV N+++H+ L A+++FD+ RD+VS N++
Sbjct: 164 LSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSM 223
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS---------------------- 221
I+GY G+L AR+LFD M + VSW T+V GYAQS
Sbjct: 224 INGY--CGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWN 281
Query: 222 ---------DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
++ +EA+ LF M ++I PD + +VS LSAC++LG L+ G IH YIE +
Sbjct: 282 AMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKH 341
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
++ ++ L T L+D YAKCG I AI++F+ +N TW A++ GLA+HG ++ YF
Sbjct: 342 ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYF 401
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
S MI+ + PD VT LG L C H GLV+E RK F +M S + +S +LKHY CM DLLGR
Sbjct: 402 SEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGR 461
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVL 452
AGL+EEA E+IK MP+ D VW L CRIHGNV + E AA ++++ P D G+Y +L
Sbjct: 462 AGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLL 521
Query: 453 ADVYANADRWEDVVKIRRSLDAGKIKK 479
A++Y A+ W++ K R+ + ++K
Sbjct: 522 ANMYGEAEMWKEAGKARKLMRQRGVEK 548
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 192/489 (39%), Positives = 291/489 (59%), Gaps = 15/489 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
+L + + C ++ + IHA F + H +L I F +S L
Sbjct: 243 SLASMAEACLAMQALKLIHAR------AFRANLHNHALVLAKIFRFAAVSPNGC-----L 291
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA +F+ I P+TF YNT+IR ++ SSP +V LF+QMR + PD ++F FLL+
Sbjct: 292 HYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGR 351
Query: 122 SQLCSH----SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
S++ + IH VLKLGF +FV+N+L+H+Y A ++F+E++ DV
Sbjct: 352 SRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADV 411
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VS + L+ +V+AG+L ARQ+FD MP RD VSW +V+GYAQ+ + EA++LF M D+
Sbjct: 412 VSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDV 471
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++PD +A+V +SAC LG+LE G +HRYI+ N L L+D YAKCG ++ A
Sbjct: 472 GVRPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLA 531
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++F + + K+L TWN+M+ A HG + F+ M+ + I+PDGVT L L +H
Sbjct: 532 WQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHK 591
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
G VD+ LF+ M+ YGV ++HYGCM D+LGRAG +EEA ++I M M + VW
Sbjct: 592 GWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGA 651
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LL CRI+G+VE+ E + +++LKP++GG Y +L D+Y A R + +++RR++D
Sbjct: 652 LLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGA 711
Query: 478 KKNAGCSLI 486
KK GCS +
Sbjct: 712 KKTLGCSWV 720
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 197/490 (40%), Gaps = 76/490 (15%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
+L + + C ++ + IHA F + H +L I F +S L
Sbjct: 89 SLASMAEACLAMQALKLIHAR------AFRANLHNHALVLAKIFRFAAVSPNGC-----L 137
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA +F+ I P+TF YNT+IR ++ SSP +V LF+QMR + PD ++F FLL+
Sbjct: 138 HYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGR 197
Query: 122 SQLCSHSLAQTIHSQVLKLGFICD------VFVLNSLMHVYCVFHRLRDAQE-------- 167
S++ ++ G D ++ N +MH+ L E
Sbjct: 198 SRMRIDLPLIVASDEIHGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQAL 257
Query: 168 -LFDEILYRDVVSCNTLIDGYV-------KAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
L +R + + L+ + G L +A +LF ++ + + TL+ GY+
Sbjct: 258 KLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYS 317
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL---------------GELEQGKN 264
+S +++QLF M + PD L +R+ L+ G
Sbjct: 318 KSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFC 377
Query: 265 IHRYIE-------------------LNQ-IRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
H ++ N+ + D +GLV + + G + A ++F+
Sbjct: 378 FHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEM 437
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD--- 361
E+++ +W M+ G A R +L F M + ++PD V ++ + C+ G ++
Sbjct: 438 PERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGF 497
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E + DE G + + D+ + G ++ A ++ M + W+ ++
Sbjct: 498 EVHRYIDE----NGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKS-LITWNSMISA 552
Query: 422 CRIHGNVEIA 431
C HGN E A
Sbjct: 553 CANHGNAEDA 562
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 136/344 (39%), Gaps = 38/344 (11%)
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLVAG 217
L A LF +I + NTLI GY K+ + + QLF++M D ++ L+ G
Sbjct: 137 LHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKG 196
Query: 218 YAQ----------SDQCEEA---------IQLFCNMMDLDIKPDNIALVSALSACARLGE 258
++ SD+ A ++ + + + + P + +L S AC +
Sbjct: 197 RSRMRIDLPLIVASDEIHGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQA 256
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--GYINTAIEIFESSQEKNLFTWNAML 316
L K IH + + + + F A G ++ A +F + N F +N ++
Sbjct: 257 L---KLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLI 313
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV--- 373
G + S+ F++M + PDG T L G S + DE+
Sbjct: 314 RGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLK 373
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
G L + L G+ A ++ +M +G DV WSGL+ G +E+
Sbjct: 374 LGFCFHLFVMNALIHLYAARGVPAAAHQVFNEM-VGADVVSWSGLVVAHVRAGELEL--- 429
Query: 434 AAEHVMKLKPEDGGV-YKVLADVYANADRWEDVVKIRRSL-DAG 475
A V PE V + V+ YA A R + +++ R + D G
Sbjct: 430 -ARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVG 472
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 278/468 (59%), Gaps = 33/468 (7%)
Query: 54 SSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYS 113
++P +AL +F++IP P+ F +N +I+ + A+ + +M + P+ ++
Sbjct: 76 ANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFT 134
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
+P L +ACS + + IH V+K G DV + ++ +H+Y F RL DA+++F
Sbjct: 135 YPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-G 193
Query: 174 YRDVVSCNTLIDGYVK-------------------------------AGDLAHARQLFDR 202
DVV NT+IDGY+K G+L AR+LFD
Sbjct: 194 ESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDE 253
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQG 262
M RD +SW ++V GY + + +EA+++F M + +P L S L+AC+ +G ++QG
Sbjct: 254 MSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQG 313
Query: 263 KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
+ +H Y++ N I++D+ L T L+D YAKCG ++ E+FE +E+ +FTWNAM+ GLA+H
Sbjct: 314 RWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIH 373
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G +L FS++ E R+KP+G+T++G L C+HAG VD+ ++F M YGV EL+H
Sbjct: 374 GRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEH 433
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
YGCM DLLGR+GL EA ++I MPM + VW LLG CRIHGN ++AE + +++L+
Sbjct: 434 YGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELE 493
Query: 443 PEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
P++ G Y +L+++YA R++DV KIR+ + IK G S++ LNG
Sbjct: 494 PQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNG 541
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/515 (37%), Positives = 288/515 (55%), Gaps = 48/515 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILT-TILYAITTFKPISSASSPTTDP 60
+L+ + +HQ HAH + GL H T T L A +A SP+
Sbjct: 13 SLSQALTALTATSHLHQAHAHLIVSGL----ASHPFTVTRLLAC-------AALSPSASD 61
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +A +IF + PS F +NTII A S L++V + M PD ++FPFL+++
Sbjct: 62 LPHAKTIFLHTHNPSPFMFNTIIMAS---SRTLDSVTFYVCMLHAGHFPDNFTFPFLIKS 118
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE--------- 171
S + L +H+ V+K G DVFV+N+++ +Y F LR A+++FDE
Sbjct: 119 SSASPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVS 178
Query: 172 -----------------------ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA 208
+ ++ VS N +I GY + + AR+LFD MP RDA
Sbjct: 179 WTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDA 238
Query: 209 VSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHR 267
SW +V+GY+Q C EA+ LF M+ D + P+ ALVSA+SACA+L LE+G+ +H
Sbjct: 239 ASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHS 298
Query: 268 YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRL 327
YI+ ++R++ L T L+D Y KCG I A +F E+N+ +WN+M+ GLA++G G+
Sbjct: 299 YIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKE 358
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
+L F +M P+ +T + L GCSH+GL+ E R LF M VYG+ +LKHYGCM
Sbjct: 359 ALALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMV 418
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGG 447
DLLGRAGL++EAL+ ++KMPM +W L+G CRIHG VE+ E + ++ L+P GG
Sbjct: 419 DLLGRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGG 478
Query: 448 VYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
Y +L +++A A RW+DV +R K+ KN G
Sbjct: 479 RYALLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPG 513
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/480 (39%), Positives = 287/480 (59%), Gaps = 12/480 (2%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
I QI Q HA L GL + I + +L F ISS+S P+ YALSI+N+I
Sbjct: 44 ITQIKQAHARILVLGLA--NDGRITSHLL----AFLAISSSSLPS----DYALSIYNSIS 93
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
+P+ F+ N +IR P +++ L+S M R+ P+ ++ F+L+ACS +
Sbjct: 94 HPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGA 153
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVSCNTLIDGYVKA 190
+ + V+KLGF+ DVFV N+L+H+YC R+ A+++FDE+ RDVVS N++I G+V+
Sbjct: 154 QVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRL 213
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G ++ A++LF MP +D +SWGT+++G Q+ + E+A+ F + + ++P+ LVS L
Sbjct: 214 GQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLL 273
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
+A A+LG LE GK IH + + + L T LVD YAKCG I+ + +F+ EK+ +
Sbjct: 274 AAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKW 333
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+WN M+ GLA HGLG+ +L F + + P VT +G L CS AGLV E + F M
Sbjct: 334 SWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLM 393
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
YG+ E++HYGCM DLL RAG + +A+EMI +MP D +W+ +LG C++HG +E+
Sbjct: 394 TDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIEL 453
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E ++++ P G Y LA ++A +WEDV K+RR + K AG SLI+ G
Sbjct: 454 GEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEG 513
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 290/488 (59%), Gaps = 13/488 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C T++++ QIH L GLL + ++ + +I P + L Y+
Sbjct: 14 SMVEPCTTLRELKQIHTQLLINGLL--NDPQLVGQFVASIALNNP---------NNLHYS 62
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS--IPPDFYSFPFLLRACS 122
+ +N P+ F++N++IRAH+ S+P + +S++ + + PD Y+F FL+R +
Sbjct: 63 NQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSA 122
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
QL +H ++H +K GF D V + L+++Y L +F I D+V
Sbjct: 123 QLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTA 182
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ K GD+ AR+LFD+M +D ++W +++GY Q Q EA+ LF M +K +
Sbjct: 183 MVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVN 242
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+++VS LSAC+ LG L+QG+ H YIE N++R+ L T L+D YAKCG +N A+E+F
Sbjct: 243 EVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFW 302
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+EKN++TW++ + GLAM+G G L FS M + ++P+ +T + L GCS GLV+E
Sbjct: 303 GMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEE 362
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
RK F+ M VYG+ L+HYGCM DL GRAG ++EAL I MP+ V W LL C
Sbjct: 363 GRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNAC 422
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+I+ N+E+ E A+ +++L+ ++ G Y +L+++YA++ W+ V +R++++ ++K G
Sbjct: 423 KIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPG 482
Query: 483 CSLIQLNG 490
CS+I++ G
Sbjct: 483 CSVIEVGG 490
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 296/493 (60%), Gaps = 21/493 (4%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGL----LFLSPCHILTTILYAITTFKPISSASSP 56
+ + + C+ ++QIH L + L LFLS + I + +S
Sbjct: 25 LQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS---------------QFIDACTSL 69
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
SYA SIF+N +P YNT I+A + SSP+NA+ L++++R + PD YS P
Sbjct: 70 GLS--SYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPS 127
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L+A +L + + + IH+Q + DV V SL+ +Y + DA++LFD + ++D
Sbjct: 128 VLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKD 187
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V N ++ GYVK G+L AR++F+ MP R+ +SW TL+AGYAQ+++ EAI+LF M
Sbjct: 188 VALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQL 247
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+++PD IA+++ LSACA LG LE G+ IH YIE + + L L+D YAK G I
Sbjct: 248 EEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRR 307
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A+E+FE+ ++K++ TW+ ++ LA+HGLG ++ F RM +A+++P+ VT + L CSH
Sbjct: 308 ALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSH 367
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
G+VD R FD+M+S+Y + +++HYGCM DLL RAG ++EA +++ MP + +W
Sbjct: 368 VGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWG 427
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL H + E+A+ A +H+ KL+P + G Y +L++ YA +W + +R+ +
Sbjct: 428 SLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAG 487
Query: 477 IKKNAGCSLIQLN 489
+KK G S+I++N
Sbjct: 488 VKKAPGGSVIEIN 500
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 277/468 (59%), Gaps = 33/468 (7%)
Query: 54 SSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYS 113
++P +AL +F++IP P+ F +N +I+ + A+ + +M + P+ ++
Sbjct: 76 ANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFT 134
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
+P L +ACS + + IH V+K G DV + ++ + +Y F RL DA+++F
Sbjct: 135 YPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS-G 193
Query: 174 YRDVVSCNTLIDGYVK-------------------------------AGDLAHARQLFDR 202
DVV NT+IDGY+K G+L AR+LFD
Sbjct: 194 ESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDE 253
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQG 262
M RD +SW ++V GY + + +EA+++F M + +P L S L+AC+ +G ++QG
Sbjct: 254 MSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQG 313
Query: 263 KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
+ +H Y++ N I++D+ L T L+D YAKCG ++ E+FE +E+ +FTWNAM+ GLA+H
Sbjct: 314 RWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIH 373
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G +L FS++ E R+KP+G+T++G L C+HAG VD+ ++F M YGV EL+H
Sbjct: 374 GRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEH 433
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
YGCM DLLGR+GL EA ++I MPM + VW LLG CRIHGN ++AE + +++L+
Sbjct: 434 YGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELE 493
Query: 443 PEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
P++ G Y +L+++YA R++DV KIR+ + IK G S++ LNG
Sbjct: 494 PQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNG 541
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 291/511 (56%), Gaps = 43/511 (8%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
++C + + Q+HA + GL + T++L + I + + + YA +
Sbjct: 21 QKCTNFRSLKQLHAFLIVNGL------NSTTSVLRELIFVSAIVVSGT-----MDYAHQL 69
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F I P F +NT+IR P AV L++QM + PD ++F F+L+AC++L
Sbjct: 70 FAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWV 129
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHV-------------------------------Y 156
L IH +VLK GF + FV N+L++ Y
Sbjct: 130 KLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGY 189
Query: 157 CVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
+L A++LFDE+ +D+VS N +I Y K G++ AR+LFD +P +D V+W ++A
Sbjct: 190 ARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIA 249
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIR 275
GY S +EA+++F M DL +PD++ ++S LSA A LG+LE GK IHR I ++
Sbjct: 250 GYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGD 309
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ LS L+D YAKCG I A+E+F+ ++K+ +WN+++ GLA+HG S+ F M
Sbjct: 310 LSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEM 369
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
+ ++KP+ +T + LV CSHAG V E R F+ M++V+ + +KHYGCM D+LGRAGL
Sbjct: 370 LRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGL 429
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+ EA + I M + + +W LLG CR+HG+VE+ A E ++K++ ++ G Y +L+++
Sbjct: 430 LIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNI 489
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
YA+ W+ V K+R+ +D G +KK G SLI
Sbjct: 490 YASQGEWDGVQKVRKLMDDGGVKKKVGHSLI 520
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/478 (37%), Positives = 285/478 (59%), Gaps = 19/478 (3%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+ Q+ QIHA+ L GL L L + L YA ++F+ IP
Sbjct: 1 MNQLKQIHAYSLRNGL---DHTKFLIEKLLQLPD--------------LPYACTLFDQIP 43
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
PS + YN I+ + P +L+ QM + P+ YSF FL AC+ L + Q
Sbjct: 44 KPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQM 103
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+HS K GF D+F + +L+ +Y LR A++LFDE+ RD+ + N+LI GY ++G
Sbjct: 104 LHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGH 163
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIALVSALS 251
+ A +LF++MP R+ +SW L++GYAQ+ + +A+++F + + KP+ +++ S L
Sbjct: 164 MEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLP 223
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF-ESSQEKNLF 310
AC++LG L+ GK I Y N ++++S +++ +A+CG I A ++F E ++NL
Sbjct: 224 ACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLC 283
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+WN M++GLA+HG +L + +M+ +++PD VT +G L+ C+H G+V E R+LF+ M
Sbjct: 284 SWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESM 343
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
ES + V+ +L+HYGC+ DLLGRAG ++EA +I+ MPM D +W LLG C HGNVE+
Sbjct: 344 ESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVEL 403
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
E AAE + KL+P + G Y +L+++YA A W V ++R+ + G I K AG S I++
Sbjct: 404 GEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEV 461
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 288/488 (59%), Gaps = 18/488 (3%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
++C+++ Q+ Q H+ + GL S H++ ++ A + T+D L+YAL +
Sbjct: 30 EKCQSMSQLRQYHSQIIRLGLS--SHNHLIPPLINF--------CARASTSDALTYALKL 79
Query: 68 FNNIPYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
F++IP P F YNTII+ H+ + ++L+S M S+ P+ ++FP LL AC ++
Sbjct: 80 FDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI- 138
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
H + IH+ + K GF LNSL+H+Y F L +A+ +F I + D VS +LI
Sbjct: 139 QHGM--QIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLIS 196
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNI 244
GY K G + A +F MP +++ SW ++A Y Q+++ EA LF M + + D
Sbjct: 197 GYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKF 256
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+ LSAC LG L+QGK IH YI+ N I +DS L+T +VD Y KCG + A+++F S
Sbjct: 257 VATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSL 316
Query: 305 QE--KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ + +WN M+ GLAMHG G ++ F M R+ PD +T L L C+H+GLV+E
Sbjct: 317 PLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEE 376
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R F M VYG+ ++H+GCM DLLGRAG++ EA ++I +MP+ DV V LLG C
Sbjct: 377 GRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGAC 436
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+ H N+E+ E V++L+P + G Y +LA++YANA +WED K+R+ +D +KK G
Sbjct: 437 KKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPG 496
Query: 483 CSLIQLNG 490
S+I+L G
Sbjct: 497 FSMIELQG 504
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 171/434 (39%), Gaps = 103/434 (23%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS-----P 56
T + + C+ I+ QIHAH G S C L ++++ TF+ + A P
Sbjct: 127 TFPSLLIACRKIQHGMQIHAHLFKFGFGAHSVC--LNSLIHMYVTFQALEEARRVFHTIP 184
Query: 57 TTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ 101
D +S+ A +IF +P ++ S+N ++ A+ + A LF +
Sbjct: 185 HPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDR 244
Query: 102 MRTVSIPP-DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
M+ + D + +L AC+ L + + IH + + G D + +++ +YC
Sbjct: 245 MKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYC--- 301
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF--RDAVSWGTLVAGY 218
K G L A Q+F +P R SW ++ G
Sbjct: 302 ----------------------------KCGCLEKALQVFHSLPLPCRWISSWNCMIGGL 333
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
A E AIQLF M + PD+I ++ L+ACA G +E+G+N Y+ IRV
Sbjct: 334 AMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYM----IRVYG 389
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-- 336
I +E F G + LGR +V +R +
Sbjct: 390 ---------------IEPRMEHF----------------GCMVDLLGRAGMVPEARKLID 418
Query: 337 EARIKPDGVTILGALVGC----SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
E + PD VT+LG L+G + L +E + E+E Y +A+L
Sbjct: 419 EMPVSPD-VTVLGTLLGACKKHRNIELGEEIGRRVIELE-----PNNSGRYVLLANLYAN 472
Query: 393 AGLIEEALEMIKKM 406
AG E+A ++ K M
Sbjct: 473 AGKWEDAAKVRKLM 486
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/513 (35%), Positives = 295/513 (57%), Gaps = 44/513 (8%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
K C + + QIHA + KG F S L +++A + + ++YA +
Sbjct: 21 KNCNNLLALKQIHATLIIKG--FNSNRAALRELIFA---------GAMTISGAINYAHQV 69
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F I P F +NT++R + +P V+L++QM + PD ++F FLL+ C++L
Sbjct: 70 FAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWR 129
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLM--HVYC--------VFHRLRD------------- 164
+H +VLK GF + FV N+L+ H C +F+ L +
Sbjct: 130 KTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGY 189
Query: 165 --------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
A+++FDE+ +D+VS N +I GYVK G++ +AR LFD P +D V+W T++A
Sbjct: 190 ARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIA 249
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIR 275
GY + +A+++F M ++ PD + ++S LSACA LG+L+ G+ +H I E+ +
Sbjct: 250 GYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGD 309
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L LVD YAKCG I A+++F+ +EK++ TWN+++ GLA HG S+ F+ M
Sbjct: 310 LSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEM 369
Query: 336 IEAR-IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
+ IKP+ +T +G +V CSHAG V+E R+ F M Y + + H+GCM DLLGRAG
Sbjct: 370 QALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAG 429
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLAD 454
L+ EA E+I KM + + +W LLG CR+HGNVE+ A E ++KL+ ++ G Y +L++
Sbjct: 430 LLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSN 489
Query: 455 VYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+YA+A W+ ++R+ +D G ++K AG SLI+
Sbjct: 490 IYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIE 522
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/478 (37%), Positives = 285/478 (59%), Gaps = 19/478 (3%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+ Q+ QIHA+ L GL L L + L YA ++F+ IP
Sbjct: 1 MNQLKQIHAYSLRNGL---DHTKFLIEKLLQLPD--------------LPYACTLFDQIP 43
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
PS + YN I+ + P +L+ QM + P+ YSF FL AC+ L + Q
Sbjct: 44 KPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQM 103
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+HS K GF D+F + +L+ +Y LR A++LFDE+ RD+ + N+LI GY ++G
Sbjct: 104 LHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGH 163
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIALVSALS 251
+ A +LF++MP R+ +SW L++GYAQ+ + +A+++F + + KP+ +++ S L
Sbjct: 164 MEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLP 223
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF-ESSQEKNLF 310
AC++LG L+ GK I Y N ++++S +++ +A+CG I A ++F E ++NL
Sbjct: 224 ACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLC 283
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+WN M++GLA+HG +L + +M+ +++PD VT +G L+ C+H G+V E R+LF+ M
Sbjct: 284 SWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESM 343
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
ES + V+ +L+HYGC+ DLLGRAG ++EA +I+ MPM D +W LLG C HGNVE+
Sbjct: 344 ESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVEL 403
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
E AAE + KL+P + G Y +L+++YA A W V ++R+ + G I K AG S I++
Sbjct: 404 GEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEV 461
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 189/514 (36%), Positives = 294/514 (57%), Gaps = 42/514 (8%)
Query: 7 IKRCKTIKQIHQIH-AHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I T+KQIH + + LT + FL +LTT A++ P + T+ + YAL
Sbjct: 11 ITNVGTLKQIHALMIVNGLTSNVGFLRKL-VLTT---AMSMVGP-----NATSAVIRYAL 61
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F IP P TF +NT IR + P++AV L++QM S+ PD ++FPF+L+AC++L
Sbjct: 62 QMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLF 121
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLM--HVYC--------VFHR-------------- 161
+ +H +VL+LGF +V V N+L+ H C +F
Sbjct: 122 WVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIA 181
Query: 162 -------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
L A++LFDE+ RD+VS N +I Y K G++ AR+LFD P +D VSW L
Sbjct: 182 GYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNAL 241
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQ 273
+ GY + EA++LF M + PD + ++S LSACA LG+LE G+ +H + IE+N+
Sbjct: 242 IGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNK 301
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
++ + L LVD YAKCG I A+ +F ++K++ +WN+++ GLA HG SL F
Sbjct: 302 GKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFR 361
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
M ++ PD VT +G L CSHAG VDE + F M++ Y + ++H GC+ D+LGRA
Sbjct: 362 EMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRA 421
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
GL++EA I M + + VW LLG C++HG+VE+A+ A E +++++ + G Y +L+
Sbjct: 422 GLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLS 481
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+VYA+ W+ +R+ +D + KN G S ++
Sbjct: 482 NVYASQGEWDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 181/485 (37%), Positives = 289/485 (59%), Gaps = 10/485 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ +C+TI QI QI H G L P YA + SS LS+A
Sbjct: 16 LLDKCRTISQIKQIQTHLTVSGTL-KDP--------YAAAKIISFCALSS-NQFSLSHAY 65
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F + + STF +NT+IRA + P A++LF M + P+ Y++ FL +AC+ L
Sbjct: 66 RLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLN 125
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ L H Q +KLG+ FV N L+H++ +F + A++LFD RDV++ LI+
Sbjct: 126 NLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALIN 185
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GYV+AG + R+LFD+MP R++VSW ++ GY + EEA++LF M+ P++
Sbjct: 186 GYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAG 245
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V A++ACA LG L+QG+ IH YI+ N++ +D + L+D YAKCG I A IF +
Sbjct: 246 IVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELR 305
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+++ + ++ GLA HG ++ F RM + P+ VT + L CS GLVD+ +
Sbjct: 306 NRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLR 365
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+F+ M +YG +++HYGC+ DLLGRAG +EEA +++K+MPM D +V LL R++
Sbjct: 366 IFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVY 425
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+VE+ E E + +L + GV+ VL+++YA+A++W++V ++RR + K++K GCSL
Sbjct: 426 GDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSL 485
Query: 486 IQLNG 490
I+++G
Sbjct: 486 IKVDG 490
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 180/432 (41%), Positives = 263/432 (60%), Gaps = 6/432 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L YA +FN IP P+TF+ N+IIR +T + P A++ + M + PD ++FP L ++
Sbjct: 28 LPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKS 87
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C LC + +H KLGF D ++ N+LM++Y L A+++FD+++ + VVS
Sbjct: 88 CGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSW 144
Query: 181 NTLIDGYVKAGDLAH-ARQLFDRMPF-RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
T+I Y + DL H A +LF RM + W ++ G+ + EEA+ LF M
Sbjct: 145 ATMIGAYAQ-WDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 203
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+K D + + S L AC LG LE GK +H YIE +I VD L T LVD YAKCG I +A+
Sbjct: 204 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 263
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ EK++ TW A++VGLAM G G +L F M + +KPD +T +G L CSHAG
Sbjct: 264 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 323
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV+E F+ M + YG+ ++HYGCM D+LGRAG I EA ++I+ MPM D FV GL
Sbjct: 324 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 383
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CRIHGN+ +AE AA+ +++L P++GG Y +L+++Y++ WE K+R + IK
Sbjct: 384 LSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK 443
Query: 479 KNAGCSLIQLNG 490
K GCS I++ G
Sbjct: 444 KPPGCSAIEVGG 455
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 37/270 (13%)
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
+G L +AR +F+++P + +++ GY + +AI + MM + PD S
Sbjct: 25 SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 84
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK-- 307
+C G L +GK +H + D+++ L++ Y+ CG + +A ++F+ K
Sbjct: 85 FKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 141
Query: 308 ------------------------------NLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
NLF WN M+ G +L F+ M
Sbjct: 142 VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQL 201
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
+ +K D VT+ L+ C+H G ++ + L +E + ++ + D+ + G IE
Sbjct: 202 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK-EKIEVDVALGTALVDMYAKCGSIE 260
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
A+ + ++MP DV W+ L+ G + G
Sbjct: 261 SAMRVFQEMP-EKDVMTWTALIVGLAMCGQ 289
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 288/490 (58%), Gaps = 18/490 (3%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPC-HILTTILYAITTFK-PISSASSPTTDP 60
L + + C QI Q+HAH + GL S C ++LT ++ +T P+ S
Sbjct: 45 LMSILHDCTLFSQIKQVHAHIIRNGL---SQCSYVLTKLIRMLTKVDVPMGS-------- 93
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
Y L +F + YP+ F + +IR + L + +++MR + P ++F L +A
Sbjct: 94 --YPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKA 151
Query: 121 CSQLCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C + L + +H+Q + +G F D++V NS++ +Y L A+++FDE+ RDVVS
Sbjct: 152 CGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVS 211
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
LI Y K GD+ A LFD +P +D V+W +V GYAQ+ + +EA++ F M D+ +
Sbjct: 212 WTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM 271
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTA 297
+ D + L +SACA+LG ++ I E + + G L+D Y+KCG + A
Sbjct: 272 ETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++FE +E+N+F++++M++G AMHG +L F M++ I+P+ VT +G L CSHA
Sbjct: 332 YKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHA 391
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLV++ R+LF +ME +GV+ HY CM DLLGRAG +EEAL+++K MPM + VW
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGA 451
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG CRIHGN +IA+ AA + KL+P G Y +L+++YA+A RWE+V K+R+ +
Sbjct: 452 LLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGF 511
Query: 478 KKNAGCSLIQ 487
KKN GCS +
Sbjct: 512 KKNPGCSWFE 521
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 296/518 (57%), Gaps = 50/518 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+RC++++QI Q+HA + +G FLS L +++A +S ++A +
Sbjct: 16 RRCRSLRQIKQVHALMVLRG--FLSDPSALRELIFA---------SSVGVRGGTAHARLV 64
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS------IPPDFYSFPFLLRAC 121
F+ IP+P F YNT+IR +P +AV ++++M S + PD +FPF+LRAC
Sbjct: 65 FDRIPHPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRAC 124
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSL--MHVYCV--------------------- 158
+ + + +H+ V+K G D FV N+L MH C
Sbjct: 125 AAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWS 184
Query: 159 -----FHRLRD---AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
F R D A+ELFDE +D+VS N +I Y K GD+A AR+LFD P RD VS
Sbjct: 185 AMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVS 244
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI- 269
W +++GY + ++A++LF M + KPD + ++S LSACA G+++ G+ +HR++
Sbjct: 245 WNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLS 304
Query: 270 -ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
++I + L L+D YAKCG + +A+E+F Q+KN+ TWN+++ GLA+HG +
Sbjct: 305 GRFSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEA 364
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
+ F +M++ +KPD +T + LV CSH G+VD+ + F+ M+ Y + +KHYGCM D
Sbjct: 365 IDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVD 424
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
+L RAGL++EA E I M + + +W LLG CRIHG +E+AE A + ++K + + G
Sbjct: 425 MLSRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGD 484
Query: 449 YKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+ +L+++YA+ W +R+ +D + K AGC+++
Sbjct: 485 FVLLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVV 522
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 282/486 (58%), Gaps = 13/486 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+F++ C T+ + IHAH + +F ++A + IS + L YA
Sbjct: 20 SFLESCTTLSHLKIIHAHLIRAHTIF---------DVFAASCLISIS----INKNLLDYA 66
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F I P+ F YN+ IR + P + + Q + + PD ++PFL++AC+Q
Sbjct: 67 AQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQK 126
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S + H Q+++ GF DV+V NSL+ +Y ++ A +F I DVVS +++
Sbjct: 127 GSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMV 186
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY+K+GD+ AR+LFD+MP ++ V+W +++GYA++ ++AI+L+ + + +
Sbjct: 187 AGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANET 246
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VS +++CA LG LE G+ H YI N++ V+ L T LVD YA+CG I+ AI +F+
Sbjct: 247 VMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQL 306
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++ +W ++ G AMHG +L YFSRM +A + P +T L CSH GLV+
Sbjct: 307 PGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGL 366
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+LF+ M+ Y + L+HYGCM DLLGRAG + EA + + +MPM + +W LLG CRI
Sbjct: 367 ELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRI 426
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H N EIAE A + +++LKPE G Y +L+++YA ++WE+V IR+ + + K G +
Sbjct: 427 HKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYT 486
Query: 485 LIQLNG 490
L +++G
Sbjct: 487 LFEMDG 492
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/488 (37%), Positives = 288/488 (59%), Gaps = 15/488 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ CK++ QI Q HAH +T GL IL+ IT K + + + LSYA
Sbjct: 22 LESCKSMNQIKQTHAHLITTGL-----------ILHPITANKLLKVLIASSFGSLSYAHQ 70
Query: 67 IFNNIPYPSTFSYNTIIRAHTLF-SSPLNAVVLF-SQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ IP P F YNT+I+AH + +S N++ +F S +R P+ Y+F F+ +AC
Sbjct: 71 LFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNG 130
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ I +K+G ++FV N+++ +Y + + +A+ +FD L +D+ S N +I
Sbjct: 131 LGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMI 190
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GYV +G++ A+++FD M RD VSW T++AGY Q +EA+ LF M+ P+
Sbjct: 191 GGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEF 250
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF--E 302
L SAL+ACA L L+QG+ IH YI+ ++I+++ L L+D YAKCG I+ A ++F E
Sbjct: 251 TLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDE 310
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ ++ WNAM+ G AMHG + ++ F +M ++ P+ VT + L CSH LV+E
Sbjct: 311 YGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEE 370
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R F M S YG+ E++HYGCM DLLGR+GL++EA E + MPM D +W LLG C
Sbjct: 371 GRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGAC 430
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIH ++E + + + +L + G + +LA++Y+ + +W++ +R+ ++ KK G
Sbjct: 431 RIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPG 490
Query: 483 CSLIQLNG 490
CS I+LNG
Sbjct: 491 CSSIELNG 498
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/501 (37%), Positives = 292/501 (58%), Gaps = 26/501 (5%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I C+TI+ + QIHA F+ G + L A + +++ D L YA
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQM--------RDTLAAAEILRFCATSDLHHRD-LDYAHK 80
Query: 67 IFNNIPYPSTFSYNTIIR--AHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQ 123
IFN +P + FS+NTIIR + + L A+ LF +M + + P+ ++FP +L+AC++
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF-DEILYRD------ 176
+ IH LK GF D FV+++L+ +Y + ++DA+ LF I+ +D
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 177 -------VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
+V N +IDGY++ GD AR LFD+M R VSW T+++GY+ + ++A++
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 260
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+F M DI+P+ + LVS L A +RLG LE G+ +H Y E + IR+D L + L+D Y+
Sbjct: 261 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG I AI +FE +N+ TW+AM+ G A+HG ++ F +M +A ++P V +
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L CSH GLV+E R+ F +M SV G+ ++HYGCM DLLGR+GL++EA E I MP+
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
D +W LLG CR+ GNVE+ + A +M + P D G Y L+++YA+ W +V ++R
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMR 500
Query: 470 RSLDAGKIKKNAGCSLIQLNG 490
+ I+K+ GCSLI ++G
Sbjct: 501 LRMKEKDIRKDPGCSLIDIDG 521
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 298/490 (60%), Gaps = 18/490 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILT-TILYAITTFKPISSASSPTTDPLSYAL 65
+ +CK++ ++ QIHA + LL H T + L A + +S L YA
Sbjct: 13 LDKCKSLCELRQIHAQMIKTNLL----NHQFTVSRLIAFCSLSGVSGG-------LDYAS 61
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV---SIPPDFYSFPFLLRACS 122
S+F+ I +P++F + +I+ + S+P+ +++L+++M + S +F S P +L+AC
Sbjct: 62 SVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEF-SIPSVLKACG 120
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L + + +H QVLK D FV NS++ +Y F + A+ +FD + RDVVS N+
Sbjct: 121 KLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNS 180
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I GY+KAG++ A+++F+ M +D V+W ++++ Y Q+ +A+ LF M+ L ++PD
Sbjct: 181 MIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPD 240
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDS-FLSTGLVDFYAKCGYINTAIEIF 301
A+VS LSA A LG +E+GK +H Y+ +N+I + S F+ + L+D Y+KCGYI A +F
Sbjct: 241 GPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVF 300
Query: 302 ES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
S S +N+ WN+M+ GLA+HGL R +L F M I+P+ +T LG L CSH GLV
Sbjct: 301 RSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLV 360
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E + F+ M Y + ++HYGCM DL GRAG +E+AL +I+ MP D+ W +L
Sbjct: 361 EEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILS 420
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
HG++EI ++AA ++L P+D Y +L+++YA A RW+DV KIR + +KK
Sbjct: 421 ASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKI 480
Query: 481 AGCSLIQLNG 490
AGCS + +NG
Sbjct: 481 AGCSSMLVNG 490
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 274/486 (56%), Gaps = 59/486 (12%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++RC ++++ QIH L GL IL I K ++ +SP + L+YA
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGL-----------ILDEIPASKLLAFCASPNSGSLAYA 71
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
++F+ I P+TF +NT+IR ++ P A++L+ M S+P + Y+FPFLL+ACS +
Sbjct: 72 RTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q IH+ ++K+GF +++ NSL++V
Sbjct: 132 SALEETQQIHAHIIKMGFGSEIYTTNSLLNV----------------------------- 162
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y K+GD+ AR LFD++ RD EA+ LF M IK DN+
Sbjct: 163 --YSKSGDIKSARLLFDQVDQRDT-----------------EALNLFHRMQTAGIKLDNV 203
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
ALVS L ACA LG L+QGK IH YI+ ++I +D L L+D YAKCG + AIE+F
Sbjct: 204 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 263
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+EK + W AM+ G A+HG GR +L +F +M A ++P+ +T G L CSHAGLV EA+
Sbjct: 264 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 323
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
LF+ ME ++G ++HYGCM DLLGRAGL++EA E+I+ MP+ + +W LL C I
Sbjct: 324 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 383
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGN+E+ + + ++++ P GG Y LA ++A A W ++RR + + K GCS
Sbjct: 384 HGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCS 443
Query: 485 LIQLNG 490
+I +NG
Sbjct: 444 VISVNG 449
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 288/490 (58%), Gaps = 18/490 (3%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPC-HILTTILYAITTFK-PISSASSPTTDP 60
L + + C QI Q+HAH + GL S C ++LT ++ +T P+ S
Sbjct: 45 LMSILHDCTLFSQIKQVHAHIIRNGL---SQCSYVLTKLIRMLTKVDVPMGS-------- 93
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
Y L +F + YP+ F + +IR + L + +++MR + P ++F L +A
Sbjct: 94 --YPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKA 151
Query: 121 CSQLCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C + L + +H+Q + +G F D++V NS++ +Y L A+++FDE+ RDVVS
Sbjct: 152 CGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVS 211
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
LI Y K GD+ A LFD +P +D V+W +V GYAQ+ + +EA++ F M D+ +
Sbjct: 212 WTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM 271
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTA 297
+ D + L +SACA+LG ++ I E + + G L+D Y+KCG + A
Sbjct: 272 ETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++FE +E+N+F++++M++G AMHG +L F M++ I+P+ VT +G L CSHA
Sbjct: 332 YKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHA 391
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLV++ R+LF +ME +GV+ HY CM DLLGRAG +EEAL+++K MPM + VW
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGA 451
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG CRIHGN +IA+ AA + KL+P G Y +L+++YA+A RWE+V K+R+ +
Sbjct: 452 LLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGF 511
Query: 478 KKNAGCSLIQ 487
KKN GCS +
Sbjct: 512 KKNPGCSWFE 521
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 275/437 (62%), Gaps = 11/437 (2%)
Query: 62 SYALSIFNNIPY-PSTFSYNTIIRAHTLFSSPLN---AVVLFSQMRTVSIPPDFYSFPFL 117
SYA S+F +I + P + YN II+A L SSP + ++ L++ ++ + PD YSFPF
Sbjct: 27 SYAYSLFTSITHAPDIYLYNNIIKA--LSSSPTHPKASIFLYNNIQLAGLRPDSYSFPFA 84
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR--LRDAQELFD--EIL 173
L+A ++ S + +HSQ ++ G D+ VL + + +Y F + DA+++FD +
Sbjct: 85 LKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDARKMFDGMSMS 144
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
DV N +++GY K GDL +AR LF+RMP R+ +SW L+ GYAQ+++ +AI LF
Sbjct: 145 TGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRR 204
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCG 292
M +++PD IA++ AL+ACARLG LE G+ I YI+ L + + L+ L+D YAK G
Sbjct: 205 MQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNALIDMYAKSG 264
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
I +A+++FE+ K + TW M+ GLA+HGLG +L FSRM AR+KP+ +T + L
Sbjct: 265 DIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILS 324
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
CSH GLV R F+ M S YG+ +++HYGCM DLLGRAG ++EA ++ +MP +
Sbjct: 325 ACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFEPNA 384
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
+W LL C HG+ E+ E A +H+++L+P++ G Y +L+++YA+ RW + +R+ +
Sbjct: 385 VIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYALLSNIYASRGRWNESRVVRKVM 444
Query: 473 DAGKIKKNAGCSLIQLN 489
+KK G SLI++N
Sbjct: 445 WDAGVKKMPGGSLIEVN 461
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 60/363 (16%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTF---------KPISSASSPT 57
+ R +I+ Q+H+ + GL S H+LT + ++F K S T
Sbjct: 88 VTRFSSIQTGRQLHSQSIRFGLH--SDLHVLTAFVQMYSSFGSGCICDARKMFDGMSMST 145
Query: 58 TD---------------PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM 102
D L A +F +P + S+ +I + + P +A+ LF +M
Sbjct: 146 GDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRRM 205
Query: 103 RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRL 162
+ ++ PD + L AC++L + L + I + +LG + LN
Sbjct: 206 QLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLN------------ 253
Query: 163 RDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
N LID Y K+GD+ A Q+F+ M + ++W T++AG A
Sbjct: 254 ------------------NALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHG 295
Query: 223 QCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGK-NIHRYIELNQIRVDSFLS 281
EA+++F M +KP++I ++ LSAC+ +G ++ G+ +R I I
Sbjct: 296 LGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHY 355
Query: 282 TGLVDFYAKCGYINTAIEIF-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
++D + G++ A + + E N W ++L HG L + ++E +
Sbjct: 356 GCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLE--L 413
Query: 341 KPD 343
+PD
Sbjct: 414 EPD 416
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 291/514 (56%), Gaps = 49/514 (9%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL--SYALSIFN 69
+K + QIHA + G F + + L ++ I+T S PT P +YA +F
Sbjct: 14 NLKTLKQIHALMIING--FNNNVNFLGDLVLTIST-----SLVGPTATPTVTNYAHQLFA 66
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
IP P TF YN +IR + +PL A+ L+++M + D Y+FPF+L+AC++L +
Sbjct: 67 QIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNT 126
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR---------------------------- 161
+H VL+LGF + V N+L+ VFH
Sbjct: 127 GSAVHGMVLRLGFGSNAVVRNTLL----VFHAKCGDLNVATSLFDDSCKGDVVAWSSLIA 182
Query: 162 -------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
L+ A++LF+E+ RD+VS N +I GYVK G++ AR LFD P +D VSW +
Sbjct: 183 GYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAM 242
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQ 273
+AGY ++A++LF M + PD + L+S LSACA LG+LE GK +H + +E++
Sbjct: 243 IAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISM 302
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
++ + L L+D YAKCG I ++++F S +K++ +WN+++VG+A+HG G+ SL F
Sbjct: 303 GKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFK 362
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
M +I P+ +T +G LV CSHAG +DE K FD M S Y + ++H GCM D+LGRA
Sbjct: 363 MMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRA 422
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
GL++EA + I M + + +W LL C++HG+VE+A+ A E + ++ + G Y +++
Sbjct: 423 GLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMS 482
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
++YA+ W+ K+R+ +D + K G S ++
Sbjct: 483 NLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVE 516
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 189/510 (37%), Positives = 291/510 (57%), Gaps = 32/510 (6%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
+ L+ CKT + + Q+HA F+ G I +T + I + + D
Sbjct: 20 LILSKPFTSCKTPRDLKQLHAIFIKTG-----------QIQDPLTAAEVIKFCAFSSRD- 67
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSP---LNAVVLFSQMRTVS-IPPDFYSFPF 116
+ YA ++F +P P+ F +NTI+R + A++LFS M + P+ ++FP
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF------- 169
+L+AC++ + IH ++K GF D FV+++L+ +Y + + DA LF
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187
Query: 170 -----DEILYR----DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
E+ R +VV N +IDG V+ GD+ A+ LFD MP R VSW +++GYAQ
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQ 247
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
+ EAI LF M +I P+ + LVS L A AR+G LE GK IH Y N+I +D L
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVL 307
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
+ LVD Y+KCG I+ A+++FE+ ++N TW+A++ AMHG ++++F M +A +
Sbjct: 308 GSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
P+ V +G L CSHAGLV+E R F M V G+ ++HYGCM DLLGRAG +EEA
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANAD 460
E+I+ MP+ D +W LLG C++H N+++ E AE +M+L P D G Y L+++YA+
Sbjct: 428 ELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLG 487
Query: 461 RWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
WE V ++R + I+K+ GCS I+++G
Sbjct: 488 NWEAVARVRLKMKGMDIRKDPGCSWIEIHG 517
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 292/498 (58%), Gaps = 24/498 (4%)
Query: 3 LNNF----IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
L NF ++ CK I ++ IHAH + L S L T + + T
Sbjct: 13 LENFFVPILQNCKNIVELKSIHAHVIKYSL---SQSSFLVTKMVDVCD----------KT 59
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-------PDF 111
+ L YA +F + P+ + YN +IRAHT A++ + +M + P PD
Sbjct: 60 EDLGYASLLFKQVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDR 119
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
++FPF++++CS L ++L + +H+ + K G ++ + N+L+ +Y L DA ++FD
Sbjct: 120 FTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDG 179
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
++ RD +S N++I G+V G + A LFD MP+R VSW +++GY + +A+ +F
Sbjct: 180 MVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVF 239
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M + ++PD I+++S L ACA+LG LE GK IH Y + N + + + L++ Y+KC
Sbjct: 240 RQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKC 299
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G I A ++F+ + ++ +W+ M+ GLA HG R ++ F RM +A+I+P+G+T LG L
Sbjct: 300 GCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLL 359
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
C+HAG +E FD M Y + E++HYGC+ D+LGRAG + +AL++I+KMPM D
Sbjct: 360 SACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPD 419
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
+W LL CR H N++IA A EH+ +L+P+D G Y +L+++YA+ +W+ V ++R+
Sbjct: 420 SKIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKL 479
Query: 472 LDAGKIKKNAGCSLIQLN 489
+ + +KK G SLI +N
Sbjct: 480 IKSKSMKKTPGSSLIDIN 497
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/549 (35%), Positives = 303/549 (55%), Gaps = 75/549 (13%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ KT QI QIHA +T L I + + S S T + ++YA
Sbjct: 16 SLLQXSKTSSQILQIHAQLITTNL-----------ISDTFAASRLLDSVVSKTLN-VNYA 63
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F I P++F NT+++ +T S+P A+ +++MR + D Y++PF+L+AC +
Sbjct: 64 ELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAM 123
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFH-------------- 160
C + + +K GF DVFV+N L+ +YC VF
Sbjct: 124 CGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSML 183
Query: 161 -------RLRDAQELFDEILYRDVVSCNTLIDGY-VKAGDLAHARQLFDRMPFRDAVSWG 212
+ +AQ +FDE+ RDVVS + +IDGY K G++ AR FD MP RD VSW
Sbjct: 184 GGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWN 243
Query: 213 TLVAGYAQSDQCE-------------------------------EAIQLFCNMMDLDIKP 241
+++ GYA+ + E EA+ LF M+ IKP
Sbjct: 244 SMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKP 303
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D +++V A+SAC++LG L+QG+ IH Y++ N++ +D + T LVD Y KCG + A IF
Sbjct: 304 DRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIF 363
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
S E+N+ +WN M+VGL M+G G+ +L F +M RI D + LG L+ CSHA LV
Sbjct: 364 NSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVT 423
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E +F++M+ VY + +L+HYGC+ DLLGRAG +++ +I+ MPM + +W LL
Sbjct: 424 EGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLA 483
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRIH NV +AE E + +LK +D GVY +++++YA+ WE +++IR+ + K+KK+
Sbjct: 484 CRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDI 543
Query: 482 GCSLIQLNG 490
G S+I+++G
Sbjct: 544 GRSVIEVDG 552
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 280/479 (58%), Gaps = 17/479 (3%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILT-TILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
++ Q+HA + +P IL T + + F P YA IF +
Sbjct: 43 ELRQVHAQIIKTN----APLSILPLTRVGLVCAFTP----------SFHYAQQIFECVEK 88
Query: 74 --PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P TF +N+ ++A SP++A++LF ++R + PD ++ +LRAC L S +
Sbjct: 89 QKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGR 148
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+H V K+GF ++++ N ++H+Y + +A+ LF+++ RDVV+ N +I +K G
Sbjct: 149 ILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQG 208
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
D A LF RMP R+ SW +++AGY Q + +EAI LF M + +K + + +V+ L+
Sbjct: 209 DHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLA 268
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
ACA LG L+ G IH Y + + + +S L+D Y KCG + A ++FE +E+ + +
Sbjct: 269 ACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS 328
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W+AM+ GLAMHG +L FS M + I+P+GVT +G L CSH GL+ E R+ F M
Sbjct: 329 WSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMT 388
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
YG+ +++HYGCM DLL RAGL+ EA E I MPM + VW LLG CR+H NVE+A
Sbjct: 389 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E A +H+++L P + G Y VL+++YA A RWED ++R+ + ++KK G S I ++G
Sbjct: 449 EEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDG 507
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 291/510 (57%), Gaps = 32/510 (6%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
+ L+ CKT + + Q+HA F+ G I +T + I + + D
Sbjct: 20 LILSKPFTSCKTPRDLKQLHAIFIKTG-----------QIQDPLTAAEVIKFCAFSSRD- 67
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSP---LNAVVLFSQMRTVS-IPPDFYSFPF 116
+ YA ++F +P P+ F +NTI+R + A++LFS M + P+ ++FP
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF------- 169
+L+AC++ + IH ++K GF D FV+++L+ +Y + + DA LF
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187
Query: 170 -----DEILYR----DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
E+ R +VV N +IDG V+ GD+ A+ LFD MP R VSW +++GYAQ
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQ 247
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
+ EAI LF M +I P+ + LVS L A AR+G LE GK IH Y N++ +D L
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVL 307
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
+ LVD Y+KCG I+ A+++FE+ ++N TW+A++ AMHG ++++F M +A +
Sbjct: 308 GSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
P+ V +G L CSHAGLV+E R F M V G+ ++HYGCM DLLGRAG +EEA
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANAD 460
E+I+ MP+ D +W LLG C++H N+++ E AE +M+L P D G Y L+++YA+
Sbjct: 428 ELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLG 487
Query: 461 RWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
WE V ++R + I+K+ GCS I+++G
Sbjct: 488 NWEAVARVRLKMKGMDIRKDPGCSWIEIHG 517
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 288/489 (58%), Gaps = 14/489 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + C T+K++ QIHA + KG+L H + +++ + T L YA
Sbjct: 14 SLLNSCTTLKEMKQIHAQLVVKGILNNPHFH-----------GQFVATIALHNTTNLDYA 62
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM---RTVSIPPDFYSFPFLLRAC 121
+ N+ P+ F+ N++IRA++ S+P + ++ + ++ PD Y+F FL+R C
Sbjct: 63 NKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTC 122
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+QL +H +H V+K GF D V L+ +Y L +FD + D+V+
Sbjct: 123 AQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQT 182
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+++ K GD+ AR++FD MP RD V+W ++AGYAQ + EA+ +F M +K
Sbjct: 183 AMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKL 242
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ +++V LSAC L L+ G+ +H Y+E ++R+ L T LVD YAKCG ++ A+++F
Sbjct: 243 NEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVF 302
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+E+N++TW++ + GLAM+G G SL F+ M ++P+G+T + L GCS GLV+
Sbjct: 303 WGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVE 362
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E RK FD M +VYG+ +L+HYG M D+ GRAG ++EAL I MPM V WS LL
Sbjct: 363 EGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHA 422
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR++ N E+ E A +++L+ ++ G Y +L+++YA+ WE V +R+++ A +KK
Sbjct: 423 CRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLP 482
Query: 482 GCSLIQLNG 490
GCS+I+++G
Sbjct: 483 GCSVIEVDG 491
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 280/479 (58%), Gaps = 17/479 (3%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILT-TILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
++ Q+HA + +P IL T + + F P YA IF +
Sbjct: 43 ELRQVHAQIIKTN----APLSILPLTRVGLVCAFTP----------SFHYAQQIFKCVEK 88
Query: 74 --PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P TF +N+ ++A SP++A++LF ++R + PD ++ +LRAC L S +
Sbjct: 89 QKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGR 148
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+H V K+GF ++++ N ++H+Y + +A+ LF+++ RDVV+ N +I +K G
Sbjct: 149 ILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQG 208
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
D A LF RMP R+ SW +++AGY Q + +EAI LF M + +K + + +V+ L+
Sbjct: 209 DHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLA 268
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
ACA LG L+ G IH Y + + + +S L+D Y KCG + A ++FE +E+ + +
Sbjct: 269 ACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS 328
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W+AM+ GLAMHG +L FS M + I+P+GVT +G L CSH GL+ E R+ F M
Sbjct: 329 WSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMT 388
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
YG+ +++HYGCM DLL RAGL+ EA E I MPM + VW LLG CR+H NVE+A
Sbjct: 389 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E A +H+++L P + G Y VL+++YA A RWED ++R+ + ++KK G S I ++G
Sbjct: 449 EEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDG 507
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 280/501 (55%), Gaps = 59/501 (11%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I +C KQ+ QIHA L GL F P + + I++A+ L YA
Sbjct: 40 SLIDQCSETKQLKQIHAQMLRTGLFF-DP----------FSASRLITAAALSPFPSLDYA 88
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF---YSFPFLLRAC 121
+F+ IP+P+ +++NT+IRA+ S+P ++++F +R + PDF ++FPFL++A
Sbjct: 89 QQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIF--LRMLHQSPDFPDKFTFPFLIKAA 146
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S+L + H V+K+ DVF+LNSL+H
Sbjct: 147 SELEELFTGKAFHGMVIKVLLGSDVFILNSLIHF-------------------------- 180
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
Y K G+L ++F P RD VSW +++ + Q EEA++LF M ++KP
Sbjct: 181 -----YAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKP 235
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ I +V LSACA+ + E G+ +H YIE N+I LS ++D Y KCG + A +F
Sbjct: 236 NGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLF 295
Query: 302 ESSQEKNLFTWNAMLVG------------LAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
+ EK++ +W MLVG LAMHG G+ ++ FS+M E ++KP+ VT
Sbjct: 296 DKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTN 355
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L CSH GLV+E R F++ME VYGV +KHY CM D+LGRAGL+EEA+E+I+KMPM
Sbjct: 356 ILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMA 415
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
VW LLG C IH NV +AE A +++L+P + G Y +L+++YA A +W+ V +R
Sbjct: 416 PAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLR 475
Query: 470 RSLDAGKIKKNAGCSLIQLNG 490
+ + +KK GCS I+++G
Sbjct: 476 KLMRDVGLKKEPGCSSIEVDG 496
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 305/551 (55%), Gaps = 79/551 (14%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +++ KT QI QIHA +T L I + + S S T + ++YA
Sbjct: 16 SLLQKSKTSSQILQIHAQLITTNL-----------ISDTFAASRLLDSVVSKTLN-VNYA 63
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F I P++F NT+++ +T S+P A+ +++MR + D Y++PF+L+AC +
Sbjct: 64 ELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAM 123
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLM------------------------------- 153
C + + +K GF DVFV+N L+
Sbjct: 124 CGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSML 183
Query: 154 --HVYCVFHRLRDAQELFDEILYRDVVSC------------------------------- 180
+V+C + +AQ +FDE+ RDVVS
Sbjct: 184 GGYVWC--GEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVS 241
Query: 181 -NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N++IDGY K G++ AR++FD+M ++ +SW ++ GYAQ +EA+ LF M+ I
Sbjct: 242 WNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGI 301
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD +++V A+SAC++LG L+QG+ IH Y++ N++ +D + T LVD Y KCG + A
Sbjct: 302 KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARR 361
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF S E+N+ +WN M+VGL M+G G+ +L F++M RI D + LG L+ CSHA L
Sbjct: 362 IFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANL 421
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V E +F++M+ VY + +L+HYGC+ DLLGRAG +++ +I+ MPM + +W LL
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CRIH NV +AE E + +LK +D GVY +++++YA+ WE +++IR+ + K+KK
Sbjct: 482 LACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKK 541
Query: 480 NAGCSLIQLNG 490
+ G S+I+++G
Sbjct: 542 DIGRSVIEVDG 552
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/480 (37%), Positives = 278/480 (57%), Gaps = 13/480 (2%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+KQ+ QI A + I+T A K ++ +SP L YA +FN I
Sbjct: 1 MKQLKQIQAQMIKTA--------IITEPKLAT---KFLTLCTSPHVGDLLYAQRVFNGIT 49
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P+TF +N IIRA++ P A + + QM + S+P + Y+FPFLLRAC L + A
Sbjct: 50 SPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQ 109
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H V+KLGF DVF LN+L+HVY + + A++LFD I RD VS N +IDGY+K+GD
Sbjct: 110 VHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGD 169
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ A +F MP ++ VSW +L++G ++ Q EA+ L M + + D +A+ S L+A
Sbjct: 170 VKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTA 229
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE--SSQEKNLF 310
CA LG L+QG+ +H Y+ N + VD + LV+ Y KCG + A+ +F +K+++
Sbjct: 230 CANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVY 289
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
W AM+ G A+HG G +L +F+RM I+P+ +T L CS+ GLV+E ++LF M
Sbjct: 290 IWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSM 349
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+ Y V+ ++HYGCM DLLGR+G ++EA E+IKKMPM +W LL C IH + +
Sbjct: 350 KCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLL 409
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
H++++ + G Y LA + A +W++ ++R + + + + G S + LNG
Sbjct: 410 GSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNG 469
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 291/486 (59%), Gaps = 17/486 (3%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C TI HQI+ H + GL L+P I + + ++ +SP+ + ++YA +F
Sbjct: 38 CTTINHFHQIYPHIIKTGLT-LNP----------IASTRALTFCASPSGN-INYAYKLFV 85
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+P P+ +S+NTIIRA + S+P A+ LF M I P + ++P + +A +QL
Sbjct: 86 RMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHY 145
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD----EILYRDVVSCNTLID 185
+H +V+KLG D F+ N+++++Y + +A+ +FD E+ DVV+ N++I
Sbjct: 146 GAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIM 205
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY K G++ +R LFD M R +VSW ++++GY ++ + EA++LF M +
Sbjct: 206 GYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFT 265
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+VS L+ACA LG L+ GK +H YI+ N ++ + T ++D Y KCG + A+E+FE+
Sbjct: 266 MVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCP 325
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGLVDEAR 364
+ L WN++++GLAM+G R + +FS++ ++ +KPD V+ +G L C H G +++AR
Sbjct: 326 RRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKAR 385
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F+ M + Y + +KHY C+ D+LG+AGL+EEA E+IK MP+ D +W LL CR
Sbjct: 386 DYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRK 445
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H NV+IA AA+ V +L P D Y ++++V+A ++++E+ ++ R + +K GCS
Sbjct: 446 HRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCS 505
Query: 485 LIQLNG 490
I+L G
Sbjct: 506 SIELYG 511
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 290/482 (60%), Gaps = 12/482 (2%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C +K + +IHAH + GL + + + ++ +S + D ++YA +F
Sbjct: 34 QCTNMKDLQKIHAHIIKTGLAH-----------HTVAASRVLTFCASSSGD-INYAYLLF 81
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
IP P+ + +NTIIR + S+P A+ LF M S+ P ++P + +A +QL +
Sbjct: 82 TTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGY 141
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H +V+KLG D F+ N+++++Y L +A+ +FDE++ DVV+CN++I G
Sbjct: 142 DGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLA 201
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
K G++ +R+LFD MP R V+W ++++GY ++ + EA++LF M ++P +VS
Sbjct: 202 KCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVS 261
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LSACA LG L+ G+ +H Y++ ++ + T ++D Y KCG I AIE+FE+S +
Sbjct: 262 LLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRG 321
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
L WN++++GLA++G R ++ YFS++ + +KPD V+ +G L C + G V +AR F
Sbjct: 322 LSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFS 381
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M + Y + +KHY CM ++LG+A L+EEA ++IK MP+ D +W LL CR HGNV
Sbjct: 382 LMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNV 441
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
EIA+ AA+ V +L P D Y ++++V A ++++E+ ++ R + +K GCS I+L
Sbjct: 442 EIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIEL 501
Query: 489 NG 490
G
Sbjct: 502 YG 503
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 264/432 (61%), Gaps = 2/432 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA +F+ IP P+ F YN +I+A++ L++QM P+ +SF FL A
Sbjct: 32 IPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSA 91
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L SH + +H+ +K GF CDVF L +L+ +Y L A++ FDE+ RDV +
Sbjct: 92 CASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTW 151
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD-LDI 239
N++I GY + GDL A +LF MP R+ SW +++GYAQ+ Q +A+ +F M + ++
Sbjct: 152 NSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEM 211
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ + L S L ACA LG LE G+ I Y N + ++S L++ YA+CG I+ A
Sbjct: 212 RPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWG 271
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE +NL +WN+M++GLA+HG ++ F +M+ PD VT +G L+ C+H G
Sbjct: 272 VFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGG 331
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V E + F+ ME + ++ +L+HYGCM DLLGRAG + EA ++I +MPM D VW L
Sbjct: 332 MVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTL 391
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG C HG+VE+AE AA + +L+P + G Y +L+++YA A RW+ V ++R+ + GKI
Sbjct: 392 LGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKIT 451
Query: 479 KNAGCSLIQLNG 490
K AG S I+ G
Sbjct: 452 KAAGYSFIEEGG 463
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 41/285 (14%)
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LI ++ + +A +LFD +P + L+ Y+ + L+ M P+
Sbjct: 22 LIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPN 81
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK------------ 290
+ SACA L +QG+ +H + + D F T LVD YAK
Sbjct: 82 EHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFD 141
Query: 291 -------------------CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
CG + A+E+F +N+ +W AM+ G A +G +L
Sbjct: 142 EMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSM 201
Query: 332 FSRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY----GVSKELKHYGCM 386
F M E ++P+ VT+ L C++ G ++ ++ VY G K L +
Sbjct: 202 FLMMEEETEMRPNEVTLASVLPACANLGALEVGERI-----EVYARGNGYFKNLYVSNAL 256
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
++ R G I++A + +++ ++ W+ ++ G +HG + A
Sbjct: 257 LEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEA 301
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 172/431 (39%), Positives = 264/431 (61%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS A +F I S+N++I A + P +A+ LF +M ++ P+ + +L A
Sbjct: 177 LSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSA 236
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ + + S + + G D+ + N+++ +Y + DAQ+LFDE+ RDV S
Sbjct: 237 CAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSW 296
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI- 239
++DGY K GD AR +F+ MP ++ +W L++ Y Q+ + +EA+ +F + I
Sbjct: 297 TIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA 356
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD + LVS LSACA+LG ++ G IH YI+ I ++ L + LVD YAKCG + A+E
Sbjct: 357 KPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALE 416
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F S +E++++ W+AM+ GL MHG G+ ++ F M EA++KP+ VT L CSHAGL
Sbjct: 417 VFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGL 476
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDE R F EME VYGV E+KHY CM D+LGRAG +EEA+E+I +M VW LL
Sbjct: 477 VDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALL 536
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C +H NVE+ E A++ ++KL+P + G +L+++YA RWE V ++R+ + ++KK
Sbjct: 537 GACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKK 596
Query: 480 NAGCSLIQLNG 490
GCS I+ NG
Sbjct: 597 EPGCSSIEANG 607
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 222/458 (48%), Gaps = 77/458 (16%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I +C + KQ+ ++HA L GL F P ++ + S+ SS +T L YA +
Sbjct: 32 IDKCSSSKQLKEVHARMLRTGLFF-DP--------FSASKLFTASALSSFST--LDYARN 80
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF-SQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ IP P+ +++NT+IRA+ S P + V+F + P+ ++FPF+++A S+L
Sbjct: 81 LFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELK 140
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + +H +KL F D+++LNSL+ Y L A+ LF I +DVVS N++I
Sbjct: 141 ASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMI- 199
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
+ +AQ + E+A++LF M ++ P+++
Sbjct: 200 ------------------------------SAFAQGNCPEDALELFLKMERENVMPNSVT 229
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V LSACA+ +LE G+ + YIE I+VD L ++D Y KCG ++ A ++F+
Sbjct: 230 MVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP 289
Query: 306 EKNLFTWNAMLVGLA-------------------------------MHGLGRLSLVYFSR 334
E+++F+W ML G A +G + +L F+
Sbjct: 290 ERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNE 349
Query: 335 MIEARI-KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
+ ++I KPD VT++ L C+ G +D + ++ G+ + D+ +
Sbjct: 350 LQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKR-EGIVLNCHLISSLVDMYAKC 408
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G +E+ALE+ + DV+VWS ++ G +HG + A
Sbjct: 409 GSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGRGKAA 445
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 278/481 (57%), Gaps = 11/481 (2%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + + IHAH L L F ++A + I+ TT+ L YA+ + +
Sbjct: 27 CSNARDLKIIHAHMLRTHLFF---------DVFAASRL--IAFCIDSTTNLLHYAIRVAS 75
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
I P+ F YN +IR + +P N+ + + + PD + PFL++AC+QL + +
Sbjct: 76 QIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPM 135
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
H Q +K GF D +V NSL+H+Y + A+ +F + DVVS +I GY +
Sbjct: 136 GMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHR 195
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD AR+LFDRMP R+ V+W T+++GYA+++ E+A++ F + + + +V
Sbjct: 196 CGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGV 255
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
+S+CA LG L G+ H Y+ N++ ++ L T +VD YA+CG + A+ +FE EK++
Sbjct: 256 ISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDV 315
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
W A++ GLAMHG +L YFS M + P +T L CSHAG+V+ ++F+
Sbjct: 316 LCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFES 375
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M+ +GV L+HYGCM DLLGRAG + +A + + KMP+ + +W LLG CRIH NVE
Sbjct: 376 MKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVE 435
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ E + +++++PE G Y +L+++YA A++W+DV +R+ + ++K G SLI+++
Sbjct: 436 VGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEID 495
Query: 490 G 490
G
Sbjct: 496 G 496
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 287/487 (58%), Gaps = 16/487 (3%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
++C+ +KQ+ + HA LT GL T +A++ ++ S P L +A +
Sbjct: 13 EKCRHMKQLKEAHAQVLTCGL---------GTDSFALSRL--LAFCSHPLHGSLPHAWKL 61
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F I +P+ NT+I+A L +N + ++SQM + PD Y+ P++L+AC+ L S
Sbjct: 62 FQQIQHPTICICNTMIKAFVLKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSC 121
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L ++ H Q +KLGF D+FV N+L+ +Y F +R A+ +FDE+ + VS +I GY
Sbjct: 122 HLGESAHGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGY 181
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
K GD+ AR LFD P +D WG++++GY Q++ +E +Q+F M ++PD LV
Sbjct: 182 AKVGDVETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILV 241
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L ACA LG +E G +HRY++ + LSTGL+D YAKCG ++ A ++F+ ++
Sbjct: 242 SILCACAHLGAMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQR 301
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ WNAM+ G+AM+G G +L FS M +A +KPD +T + CS++G+ EA +L
Sbjct: 302 DTICWNAMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLL 361
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG----DVFVWSGLLGGCR 423
+ M +VY + + +HYGC+ DLLGRAGL++EA E+I KMP W LL C
Sbjct: 362 NSMCTVYNMEPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACC 421
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HG E+AE AA+ + L+ G Y +L+++YA A + + V +IR+ ++ + K GC
Sbjct: 422 SHGQTEVAEDAAQRLFHLE-HHSGAYVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGC 480
Query: 484 SLIQLNG 490
S +++NG
Sbjct: 481 SSVKING 487
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 298/521 (57%), Gaps = 49/521 (9%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILT-TILYAITTFKPISSASSPTTDPLSYAL 65
+ +CK++ ++ QIHA + LL H T + L A + +S L YA
Sbjct: 13 LDKCKSLCELRQIHAQMIKTNLL----NHQFTVSRLIAFCSLSGVSGG-------LDYAS 61
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT---VSIPPDFYSFPFLLRACS 122
S+F+ I +P++F + +I+ + S+P+ +++L+++M + S +F S P +L+AC
Sbjct: 62 SVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEF-SIPSVLKACG 120
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L + + +H QVLK D FV NS++ +Y F + A+ +FD + RDVVS N+
Sbjct: 121 KLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNS 180
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE----------------- 225
+I GY+KAG++ A +LFD MP RD VS ++ GY + +CE
Sbjct: 181 MIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTW 240
Query: 226 --------------EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
+A+ LF M+ L ++PD A+VS LSA A LG +E+GK +H Y+ +
Sbjct: 241 TSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSM 300
Query: 272 NQIRVDS-FLSTGLVDFYAKCGYINTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSL 329
N+I + S F+ + L+D Y+KCGYI A +F S S +N+ WN+M+ GLA+HGL R +L
Sbjct: 301 NKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREAL 360
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F M I+P+ +T LG L CSH GLV+E + F+ M Y + ++HYGCM DL
Sbjct: 361 DIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDL 420
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
GRAG +E+AL +I+ MP D+ W +L HG++EI ++AA ++L P+D Y
Sbjct: 421 FGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSY 480
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+L+++YA A RW+DV KIR + +KK AGCS + +BG
Sbjct: 481 VLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBG 521
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/550 (36%), Positives = 293/550 (53%), Gaps = 84/550 (15%)
Query: 14 KQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
+ + Q+HA + G L SP ++L A +A+SPT P YA+S+F P
Sbjct: 30 RYLPQLHAALIKSGELTGSP-KCFHSLLEA--------AAASPTLLP--YAVSLFRLGPR 78
Query: 74 P--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLRACSQLCSHSLA 130
P ST YN ++RA P +A+ LF +M V S+ PD ++ L++CS++C+ +
Sbjct: 79 PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138
Query: 131 QTIHSQVLKLGFICDVFVLNSL-------------------------------------- 152
+ I + +K G + D FVL+SL
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKN 198
Query: 153 ---MHVYCVFHRLRDAQELFDEILYRDVVSC----------------------------- 180
M V +F + + FDEI VV+
Sbjct: 199 GNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM 258
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
LID Y K G+L AR+LFD M RD V+W +++GY Q+DQC EA+ LF M +++
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE 318
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+++ +VS LSACA LG LE GK +H YI ++ + L T LVDFYAKCG I+ A+E
Sbjct: 319 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEA 378
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FES KN +TW A++ G+A +G GR +L FS M +A I+P VT +G L+ CSH+ LV
Sbjct: 379 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLV 438
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E R+ FD M YG+ +HYGC+ DLLGRAGLI+EA + I+ MP+ + +W LL
Sbjct: 439 EEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C +H NVEI E A + ++ L P G Y +L+++YA+ +W++ IR+ + I+K
Sbjct: 499 SCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKT 558
Query: 481 AGCSLIQLNG 490
GCSLI+L+G
Sbjct: 559 PGCSLIELDG 568
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 291/519 (56%), Gaps = 51/519 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+RC++++QI Q+HA + +G FLS L +++A ++ ++A +
Sbjct: 16 RRCRSLRQIKQVHALMVLQG--FLSDSSALRELIFA---------SAVGVRGGTAHARLV 64
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT-------VSIPPDFYSFPFLLRA 120
F+ IP+P F YNT+IR +P +AV ++++M +++ PD +FPF+LRA
Sbjct: 65 FDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRA 124
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV---------------------- 158
C+ + + +H+ V+K G D FV N+L+ ++
Sbjct: 125 CAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAW 184
Query: 159 ------FHRLRD---AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
F R D A+ELFDE +D+VS N +I Y K GD+A AR+LFD P RD V
Sbjct: 185 SAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVV 244
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW +++GY + ++A++LF M + KPD + ++S LSACA G+L+ G+ +H ++
Sbjct: 245 SWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFL 304
Query: 270 --ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRL 327
++I + L L+D YAKCG + +A+E+F Q+KN+ TWN+++ GLA+HG
Sbjct: 305 SGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATE 364
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
S+ F +M++ +KPD +T + L CSH G+VD+ + F M+ Y + +KHYGCM
Sbjct: 365 SIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMV 424
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGG 447
D+L R GL++EA E I M + + +W LLG CRIHG +E+AE A ++K + + G
Sbjct: 425 DMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASG 484
Query: 448 VYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+ +L+++YA+ W +R+ +D + K AG ++I
Sbjct: 485 DFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVI 523
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/484 (37%), Positives = 289/484 (59%), Gaps = 17/484 (3%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
++C +++ IHAH F + H +L + F +A SP D LSYA ++
Sbjct: 15 EKCISMRNFKLIHAH------AFRTCLHQHAVVLGKLFRF----AAVSPFGD-LSYAHNM 63
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F+ +P P+TF YNT+IRAH+ ++P + + F++MR SI PD +SF FLL+ S+ +
Sbjct: 64 FDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLK--SRSFTM 121
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI----LYRDVVSCNTL 183
L IH V K GF + V N+L+H+Y V A+++F++ L D+VS + L
Sbjct: 122 PLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGL 181
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ + KAG+L AR++FD MP RD VSW +++ Y+++ + E + LF M + PD
Sbjct: 182 LVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDE 241
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++S +SACA LG+ E G+ +H+++E N L L+D Y KCG + A ++F+
Sbjct: 242 VTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDR 301
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
++ K+L TWNAM++ A HG + F MI + + PDGVTIL LV +H G VDE
Sbjct: 302 TKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEG 361
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+LF+ M+ YGV ++HYG + D+LGR+G ++EA ++ MP+ + +W LLG CR
Sbjct: 362 IRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACR 421
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
IHG+V + E + +++LKP++GG Y +L D+Y A R + ++R+++ A +KN GC
Sbjct: 422 IHGDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGC 481
Query: 484 SLIQ 487
S ++
Sbjct: 482 SWVE 485
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 291/519 (56%), Gaps = 51/519 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+RC++++QI Q+HA + +G FLS L +++A ++ ++A +
Sbjct: 16 RRCRSLRQIKQVHALMVLQG--FLSDSSALRELIFA---------SAVGVRGGTAHARLV 64
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT-------VSIPPDFYSFPFLLRA 120
F+ IP+P F YNT+IR +P +AV ++++M +++ PD +FPF+LRA
Sbjct: 65 FDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRA 124
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV---------------------- 158
C+ + + +H+ V+K G D FV N+L+ ++
Sbjct: 125 CAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAW 184
Query: 159 ------FHRLRD---AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
F R D A+ELFDE +D+VS N +I Y K GD+A AR+LFD P RD V
Sbjct: 185 SAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVV 244
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW +++GY + ++A++LF M + KPD + ++S LSACA G+L+ G+ +H ++
Sbjct: 245 SWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFL 304
Query: 270 --ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRL 327
++I + L L+D YAKCG + +A+E+F Q+KN+ TWN+++ GLA+HG
Sbjct: 305 SGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATE 364
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
S+ F +M++ +KPD +T + L CSH G+VD+ + F M+ Y + +KHYGCM
Sbjct: 365 SIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMV 424
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGG 447
D+L R GL++EA E I M + + +W LLG CRIHG +E+AE A ++K + + G
Sbjct: 425 DMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASG 484
Query: 448 VYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+ +L+++YA+ W +R+ +D + K AG ++I
Sbjct: 485 DFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVI 523
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 272/478 (56%), Gaps = 17/478 (3%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS--PTTDPLSYALSIFNNIP 72
++ Q+HAH L SP L P+S +S SYA IF +
Sbjct: 30 ELKQLHAHLLKTN----SPLSSL-----------PLSRVASVCAFNSSFSYAKLIFQLLD 74
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+NT +R+ SP +A+ LF ++R I PD Y+ F+L+ACS+L +
Sbjct: 75 ASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKI 134
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H V KLG ++F+ N ++H+Y + + A+++FD++ RDV++ N +I VK GD
Sbjct: 135 VHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGD 194
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
A +LF MP R+ SW +++ GYAQ + +EAI LF M D + P+ + +V+ L A
Sbjct: 195 AEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVA 254
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA +G L G+ IH + + + + L+D Y KCG + A IF++ +E+ + +W
Sbjct: 255 CADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSW 314
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
+AM+ GLA HG +L F++MI +KP+ VT +G L CSH G+V++ RK F M
Sbjct: 315 SAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTR 374
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
YG+ ++HYGCM DL RAGL++EA E I MP+ + VW LLGGC++H N+++AE
Sbjct: 375 DYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAE 434
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
A H+ KL P + G Y VL+++YA A RWEDV ++R+ + +KK G S I + G
Sbjct: 435 EATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEG 492
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/555 (35%), Positives = 291/555 (52%), Gaps = 79/555 (14%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
R ++ + Q+HA L G + SP + + A SSA LSYA+ +F
Sbjct: 72 RRAALRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAH------LSYAIRLF 125
Query: 69 NNIPYP--STFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLC 125
P+P S SYN +IR+ P +A+ LF +M ++ PD ++ +++CS++C
Sbjct: 126 RLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMC 185
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSL--MHVYC--------VFHRLR------------ 163
S+ + + + K GF+ D FVLNSL M+ C +FH ++
Sbjct: 186 DLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIA 245
Query: 164 ------DAQEL-------------FDEILYRDVVSC------------------------ 180
D +E+ FDE+ V +
Sbjct: 246 GYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLR 305
Query: 181 -----NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
L+D Y K G+L AR+LFDRM RD V+W +++GY QSD+C EA+ +F M
Sbjct: 306 SRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQ 365
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
++ P+++ +VS LSACA LG LE GK +H YI + + L T LVDFYAKCG I
Sbjct: 366 GTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIK 425
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A++ FES +N +TW A++ G+A +G R +L FS M+EA I+P VT +G L+ CS
Sbjct: 426 DAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACS 485
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H LV+E R+ F M YG+ ++HYGCM DLLGRAGLI+EA + I+ MP+ + VW
Sbjct: 486 HGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVW 545
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL C +H NVEI E A + ++ L P G Y +L++ YA+ +W++ +R+ +
Sbjct: 546 RALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEK 605
Query: 476 KIKKNAGCSLIQLNG 490
++K GCSLI+L G
Sbjct: 606 GVEKIPGCSLIELEG 620
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 185/482 (38%), Positives = 282/482 (58%), Gaps = 15/482 (3%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+KQ + H + GL P L I +F SA P+ D + YAL +
Sbjct: 1 MKQFKEAHTQLIINGLTHPPPS------LRPIISF----SALDPSGD-IDYALLLLLRTS 49
Query: 73 YPST-FSYNTIIRAHTLFSSP---LNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
P T F +NT IR + P L++V+LF +M +S+ P+ ++F FL + CS +
Sbjct: 50 TPPTVFLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFD 109
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
L + H V+K F DVFV NS++ Y V RL DA+ +FDE DVVS N++IDG +
Sbjct: 110 LGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCI 169
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+ G++ A LF +M R+ +SW +++GYAQ+ Q +EA+ LF M LD +P++ LVS
Sbjct: 170 RNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVS 229
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LSAC++LG L+ G +H YI +RVDS LS L+D YAKCG I+ A++ F +S++++
Sbjct: 230 VLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRD 289
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ + A + GLAM+G +L F +M I PDGV+ + L CSHAG V++ F
Sbjct: 290 VSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFA 349
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M V+G+ EL HY CM DLLGRAGL+EEA + + MP+ D +W LLG CR++GN
Sbjct: 350 SMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNA 409
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
E+ + +++ G Y +L+++YA + + ED ++R+++ K+ + GCSLI++
Sbjct: 410 EMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEV 469
Query: 489 NG 490
G
Sbjct: 470 AG 471
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 291/499 (58%), Gaps = 27/499 (5%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C TIK++ QIH + G F +L +L + T+ L A
Sbjct: 23 SLLQTCDTIKKLKQIHTQIIVNG--FSQKNFLLVKLL-----------SFYITSGNLLNA 69
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F I PST +N +IR H+ +P V L+++M P+ +++ FL+ C++
Sbjct: 70 HKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARS 129
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV---FHRLRDAQELFDEILYRDVVSCN 181
+ +H +V+ G+ +VFV SL+++Y + + +R A+ +FDEI+ R++VS N
Sbjct: 130 RLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWN 189
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+L+ GYV+ GD+ AR++FD MP R+ VSW T++AG AQ +C++A+ LF M +K
Sbjct: 190 SLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKL 249
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIEL-----NQIRVDSFLSTGLVDFYAKCGYINT 296
D +ALV+ALSACA LG+L+ G IH YI+ NQ + S L+ L+ YA CG I+
Sbjct: 250 DQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVS-LNNSLIHMYASCGVIDK 308
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF---SRMIEARIKPDGVTILGALVG 353
A ++F Q+++ +W +M+ G A G +L F R+ +PDG+T +G L
Sbjct: 309 AYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCA 368
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSHAG VD+ R F+ M +G+ ++HYGCM DLL RAG ++EA +I+ MPM +
Sbjct: 369 CSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDA 428
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHV-MKLKPEDGGVYKV-LADVYANADRWEDVVKIRRS 471
VW LLGGCRIH N E+A A+ + ++LKP+ Y V L++VYA A RW+DV +R+
Sbjct: 429 VWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQK 488
Query: 472 LDAGKIKKNAGCSLIQLNG 490
+ ++K AG S +Q+NG
Sbjct: 489 MVEIGVRKPAGRSWVQING 507
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 265/431 (61%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +F NIP S+N++I A P A+ LF +M T ++ P+ + +L A
Sbjct: 187 LGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSA 246
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ + +HS + + + + N+++ +Y + DA+ LFD++ +D+VS
Sbjct: 247 CAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSW 306
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
T++ GY K G+ A+ +FD MP +D +W L++ Y Q + +EA++LF + +
Sbjct: 307 TTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTA 366
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD + LVS LSACA+LG ++ G IH YI+ ++++ L+T L+D Y KCG + A+
Sbjct: 367 KPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALM 426
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F S + K++F W+AM+ GLAMHG G+ ++ FS+M E ++KP+ VT L CSH GL
Sbjct: 427 VFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL 486
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E R F++ME VYGV +KHY CM D+LGRAGL+EEA+E+I+KMPM VW LL
Sbjct: 487 VEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 546
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C IH NV +AE A +++L+P + G Y +L+++YA A +W+ V +R+ + +KK
Sbjct: 547 GACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKK 606
Query: 480 NAGCSLIQLNG 490
GCS I+++G
Sbjct: 607 EPGCSSIEVDG 617
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 213/462 (46%), Gaps = 89/462 (19%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I +C KQ+ QIHA L GL F P + + I++A+ L YA
Sbjct: 40 SLIDQCSETKQLKQIHAQMLRTGLFF-DP----------FSASRLITAAALSPFPSLDYA 88
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQ 123
+F+ IP+P+ +++NT+IRA+ S+P ++++F +M S PD ++FPFL++A S+
Sbjct: 89 QQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASE 148
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + H V+K+ DVF+LNSL+H Y L +F I RDVVS N++
Sbjct: 149 LEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSM 208
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC-EEAIQLFCNMMDLDIKPD 242
I +V+ G C EEA++LF M ++KP+
Sbjct: 209 ITAFVQGG--------------------------------CPEEALELFQEMETQNVKPN 236
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
I +V LSACA+ + E G+ +H YIE N+I LS ++D Y KCG + A +F+
Sbjct: 237 GITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFD 296
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI---------------------- 340
EK++ +W MLVG A G + F M I
Sbjct: 297 KMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALEL 356
Query: 341 ----------KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC----- 385
KPD VT++ L C+ G +D + VY + K+ C
Sbjct: 357 FHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWI-----HVY-IKKQGMKLNCHLTTS 410
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ D+ + G +++AL M+ DVFVWS ++ G +HG+
Sbjct: 411 LIDMYCKCGDLQKAL-MVFHSVERKDVFVWSAMIAGLAMHGH 451
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 177/423 (41%), Gaps = 58/423 (13%)
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVL-----FSQMRTVSIPPDFYSFPFLLRACSQLC 125
IP P S + R+H+L + N++ L F+ T+S L+ CS+
Sbjct: 3 IPNPCLVS---LPRSHSLPTPNPNSITLNNDRYFANHPTLS----------LIDQCSE-- 47
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ L Q IH+Q+L+ G D F + L+ A F + Y
Sbjct: 48 TKQLKQ-IHAQMLRTGLFFDPFSASRLITAA--------ALSPFPSLDY----------- 87
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK-PDNI 244
A+Q+FD++P + +W TL+ YA S +++ +F M+ PD
Sbjct: 88 ----------AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKF 137
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+ A + L EL GK H + + D F+ L+ FYAKCG + +F +
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI 197
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++ +WN+M+ G +L F M +KP+G+T++G L C+ + R
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR 257
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ +E + + L M D+ + G +E+A + KMP D+ W+ +L G
Sbjct: 258 WVHSYIER-NRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVGYAK 315
Query: 425 HGNVEIAEAAAEHVMKLKP-EDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
G + AA+ + P +D + L Y + ++ +++ L K K
Sbjct: 316 IGEYD----AAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEV 371
Query: 484 SLI 486
+L+
Sbjct: 372 TLV 374
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 164/431 (38%), Positives = 267/431 (61%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ I S+N++I SP A+ LF +M+ + P+ + +L A
Sbjct: 182 LDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSA 241
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ + + + G ++ + N+++ +Y L DA+ LFD++ +D+VS
Sbjct: 242 CAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSW 301
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
T+IDGY K GD AR++FD MP D +W L++ Y Q+ + +EA+ +F + ++ +
Sbjct: 302 TTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNT 361
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KP+ + L S L+ACA+LG ++ G IH YI+ I+++ ++T L+D Y+KCG++ A+E
Sbjct: 362 KPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALE 421
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F S + +++F W+AM+ GLAMHG GR ++ FS+M E ++KP+ VT L CSH+GL
Sbjct: 422 VFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGL 481
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDE R F++M VYGV KHY CM D+LGRAG +EEA+E+I+KMP+ VW LL
Sbjct: 482 VDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALL 541
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CRI+GNVE+AE A +++ + G Y +L+++YA A +W+ V ++R+ + ++K
Sbjct: 542 GACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEK 601
Query: 480 NAGCSLIQLNG 490
GCS I++NG
Sbjct: 602 EPGCSSIEVNG 612
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 214/459 (46%), Gaps = 77/459 (16%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
T+ I +C K + Q+HAH L GL F P + T + SSP++ L
Sbjct: 32 TVPILIDKCANKKHLKQLHAHMLRTGLFFDPP---------SATKLFTACALSSPSS--L 80
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRA 120
YA +F+ IP P+ +++NT+IRA P+ +++F QM S P+ Y+FPF+++A
Sbjct: 81 DYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKA 140
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+++ S Q IH V+K F D+F+ NSL+H Y L A +F +I+ +D+VS
Sbjct: 141 ATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSW 200
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N++I G+V+ G A QLF RM +A +
Sbjct: 201 NSMISGFVQGGSPEEALQLFKRMKMENA-------------------------------R 229
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + +V LSACA+ +LE G+ YIE N I ++ LS ++D Y KCG + A +
Sbjct: 230 PNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRL 289
Query: 301 FESSQEKNLFTWNAMLVGLA-------------------------------MHGLGRLSL 329
F+ +EK++ +W M+ G A +G + +L
Sbjct: 290 FDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEAL 349
Query: 330 VYFSRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
F + + KP+ VT+ L C+ G +D + ++ G+ + D
Sbjct: 350 AIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKK-QGIKLNFHITTSLID 408
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ + G +E+ALE+ + DVFVWS ++ G +HG+
Sbjct: 409 MYSKCGHLEKALEVFYSVER-RDVFVWSAMIAGLAMHGH 446
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 290/490 (59%), Gaps = 30/490 (6%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILT-TILYAITTFKPISSASSPTTDPLSYAL 65
+ +CK++ ++ QIHA + LL H T + L A + +S L YA
Sbjct: 13 LDKCKSLCELRQIHAQMIKTNLL----NHQFTVSRLIAFCSLSGVSGG-------LDYAS 61
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV---SIPPDFYSFPFLLRACS 122
S+F+ I +P++F + +I+ + S+P+ +++L+++M + S +F S P +L+AC
Sbjct: 62 SVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEF-SIPSVLKACG 120
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L + + +H QVLK D FV NS++ +Y F + A+ +FD + RDVVS N+
Sbjct: 121 KLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNS 180
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I GY+KAG++ A +LFD MP RD VS ++ GY + M+ L ++PD
Sbjct: 181 MIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGK------------EMLSLGLRPD 228
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDS-FLSTGLVDFYAKCGYINTAIEIF 301
A+VS LSA A LG +E+GK +H Y+ +N+I + S F+ + L+D Y+KCGYI A +F
Sbjct: 229 GPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVF 288
Query: 302 ES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
S S +N+ WN+M+ GLA+HGL R +L F M I+P+ +T LG L CSH GLV
Sbjct: 289 RSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLV 348
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E + F+ M Y + ++HYGCM DL GRAG +E+AL +I+ MP D+ W +L
Sbjct: 349 EEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILS 408
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
HG++EI ++AA ++L P+D Y +L+++YA A RW+DV KIR + +KK
Sbjct: 409 ASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKI 468
Query: 481 AGCSLIQLNG 490
AGCS + +NG
Sbjct: 469 AGCSSMLVNG 478
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 268/468 (57%), Gaps = 31/468 (6%)
Query: 54 SSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYS 113
++P L++AL +F +P P+ F +N II+ + P A+ + +M P+ ++
Sbjct: 73 ANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFT 132
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
+P L +AC+ + +H+ V+K G DV + ++ + +Y F + A+ + E
Sbjct: 133 YPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDG 192
Query: 174 YRDVVSCNTLIDGYVKAGD-------------------------------LAHARQLFDR 202
DV+ N +IDGY+K G+ + AR+LF+
Sbjct: 193 NSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNE 252
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQG 262
M ++ +SW ++ GY + +EA+++F M +I+P L S L+ACA LG L+QG
Sbjct: 253 MKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQG 312
Query: 263 KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
+ IH Y+ N D+ L T LVD YAKCG ++ A ++FE ++K +FTWNAM+ GL MH
Sbjct: 313 RWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMH 372
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G ++ F +M + + +P+G+T+LG L C+H+G+VDE ++F+ ME VYG+ ++H
Sbjct: 373 GRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEH 432
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
YGC+ DLLGRAGL+ EA E++ MPM VW LLG CR HG+VE+ E + +++L+
Sbjct: 433 YGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELE 492
Query: 443 PEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
P++ G Y +L+++YA A RW+DV +R+ + +K + G S+I +G
Sbjct: 493 PQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDG 540
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/434 (41%), Positives = 262/434 (60%), Gaps = 17/434 (3%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPD 110
SA S D L YA IF ++ P+ FSYNT+IRA + + P +A+++F +M S+ P+
Sbjct: 30 SAVSDHRD-LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPN 88
Query: 111 FYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
++FP + +AC + + +H +K G D FV+++++ +Y + DA LF
Sbjct: 89 CFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFY 148
Query: 171 EILY---------------RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLV 215
++ DVV N +IDGYV+ G+L AR LFD MP R VSW ++
Sbjct: 149 RRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMI 208
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
AGYAQS +EA+++F M ++ P+ + LVS L A +RLG LE GK +H Y N I
Sbjct: 209 AGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIG 268
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
VD L + L+D YAKCG I A+++FE ++N+ TW+ ++ GLAMHG + +L +F M
Sbjct: 269 VDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDM 328
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
A + P VT +G L CSHAGLV+E R FD M V G+ ++HYGCM DLLGRAGL
Sbjct: 329 ERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGL 388
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+EE+ E+I MP+ D +W LLG C++HGNVE+ + AEH+M+L P D G Y L+++
Sbjct: 389 LEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNI 448
Query: 456 YANADRWEDVVKIR 469
YA+ WE V K+R
Sbjct: 449 YASLGNWEGVAKVR 462
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 286/484 (59%), Gaps = 13/484 (2%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++RC ++ Q ++HA K L ++LT +L +T P SY
Sbjct: 15 LERCSSLNQAKEVHAQIYIKNLQ--QSSYVLTKLLRLVTAL--------PHVPLHSYPRL 64
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + P+ F++ +IRA+ L A+ +S MR + P ++F L AC+ +
Sbjct: 65 LFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRH 124
Query: 127 HSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+L +H+Q L LG F D++V N+++ +Y LR A+ +FDE+ RDV+S LI
Sbjct: 125 SALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIV 184
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y + GD+ AR LFD +P +D V+W +V GYAQ+ +A+++F + D ++ D +
Sbjct: 185 AYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVT 244
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRV--DSFLSTGLVDFYAKCGYINTAIEIFES 303
LV +SACA+LG + I E + V + + + L+D Y+KCG + A ++F+
Sbjct: 245 LVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKG 304
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+E+N+F++++M+VG A+HG R ++ F M+E +KP+ VT +G L CSHAGLVD+
Sbjct: 305 MRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQG 364
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++LF ME YGV+ + Y CM DLL RAG +E+AL++++ MPM D VW LLG
Sbjct: 365 QQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASH 424
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+HGN ++AE A++ + +L+P++ G Y +L++ YA+A RW+DV K+R+ L +KKN G
Sbjct: 425 VHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGW 484
Query: 484 SLIQ 487
S ++
Sbjct: 485 SWVE 488
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/417 (39%), Positives = 252/417 (60%), Gaps = 5/417 (1%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS----QLCSHSLAQTIH 134
++ +IRAH P A+ L++ + + P ++ P LL++ + + LA +H
Sbjct: 56 HDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVH 115
Query: 135 SQVLKLGFICDVFVLNSLMHVYC-VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
+ ++LG + V N+L+ V+ + RL DA L D + NTLI + +AG +
Sbjct: 116 AHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRV 175
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A AR LFD MP R+AVSW +V GY Q+ EA+ +F M ++PD+ LV L+AC
Sbjct: 176 ADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAAC 235
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A+LG LEQGK +H Y++ N IR+ FL T LVD YAKCG + +E+FE ++KN+ W
Sbjct: 236 AQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWT 295
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
M+ GLAMHG G SL FS+M + +KPD + +GAL C+H GLVD+ R+LF+ M +
Sbjct: 296 TMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNN 355
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ +++HYGCM DLL R GL+ EA +M++KMPM D +W L+ GCR H NVE+AE
Sbjct: 356 YGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEY 415
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+H ++L+P+ G Y +L ++Y+ + R +IR + ++K GCS +++ G
Sbjct: 416 VIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKG 472
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 146/332 (43%), Gaps = 46/332 (13%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAI--TTFKPISSASSPTTDPLSYALSIFNNIPYPS 75
++HA L + L+ H+L A+ +TF + +A + ++ A S+F+ +P +
Sbjct: 135 RVHAGLLGR----LADAHLLLRTSAAVDASTFNTLITAHA-RAGRVADARSLFDEMPERN 189
Query: 76 TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS 135
S++ ++ + A+ +FSQM+ + PD +L AC+QL + + +H
Sbjct: 190 AVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHG 249
Query: 136 QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
+ VF+ L+D Y K G++
Sbjct: 250 YLKANNIRMTVFL-------------------------------GTALVDMYAKCGEVQL 278
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
++F+ M ++ ++W T++ G A + +++ LF M +KPD+IA + AL AC
Sbjct: 279 GMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTH 338
Query: 256 LGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK-NLFT 311
G +++G+ + + N + +++ + +VD A+ G ++ A ++ E K +
Sbjct: 339 TGLVDKGRELFNSMVNNYGIKPKIEHY--GCMVDLLARNGLLSEARDMVEKMPMKPDALI 396
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
W A++ G H L+ IE ++PD
Sbjct: 397 WGALMAGCRFHKNVELAEYVIKHWIE--LEPD 426
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/490 (36%), Positives = 287/490 (58%), Gaps = 17/490 (3%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
F+ +K HQ+HAH L +GL P ++ + + A ASS D +
Sbjct: 78 QFLTGLNMLKLGHQVHAHMLLRGL---QPTALVGSKMVAFY-------ASSGDIDS---S 124
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+FN I PS+ +N++IRA+ + V + M + D+++FPF+L++ +L
Sbjct: 125 VSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVEL 184
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S + + +H +L++G D++V SL+ +Y + DA ++FD + RDV S N L+
Sbjct: 185 LSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALL 244
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD--IKPD 242
GY K+G + A +F+RMP+R+ VSW T+++GY+QS ++A+ LF M+ D ++P+
Sbjct: 245 AGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPN 304
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ ++S L ACA+L LE+G+ IH + ++ + L YAKCG + A F+
Sbjct: 305 WVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFD 364
Query: 303 --SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
+ EKNL WN M+ A +G G ++ F MI+A I+PD +T G L GCSH+GLV
Sbjct: 365 KLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLV 424
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D K F+ M + Y ++ ++HY C+ADLLGRAG + EA +++ +MPM +W LL
Sbjct: 425 DVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLA 484
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR H N+E+AE AA + L+PE+ G Y +L+++YA A RW++V K+R + + KK+
Sbjct: 485 ACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKS 544
Query: 481 AGCSLIQLNG 490
GCS I++NG
Sbjct: 545 PGCSWIEING 554
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 131/339 (38%), Gaps = 57/339 (16%)
Query: 32 SPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSS 91
+P H+L IL++ + I + P++ P ++S P + + +++
Sbjct: 13 TPSHLLFRILHSYSGSAHIDTVPPPSSPPFKCSIS-----PLTISATLQNLLQ------- 60
Query: 92 PLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNS 151
PL+A PP S+ + + + L L +H+ +L G V +
Sbjct: 61 PLSA----------PGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSK 110
Query: 152 LMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSW 211
++ Y + + +F+ I + N++I Y + G
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYG-------------------- 150
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
E + + +M D L + L + GK +H I
Sbjct: 151 -----------FAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILR 199
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
++ D +++T L+ Y KCG IN A ++F++ +++ +WNA+L G G +L
Sbjct: 200 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAI 259
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
F RM I V+ + G S +GL +A LFDEM
Sbjct: 260 FERMPWRNI----VSWTTMISGYSQSGLAQQALSLFDEM 294
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 248/417 (59%), Gaps = 5/417 (1%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS----QLCSHSLAQTIH 134
+N +IRA + P A+ L++ + P ++ P LL++ + + LA +H
Sbjct: 174 HNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVH 233
Query: 135 SQVLKLGFICDVFVLNSLMHVYC-VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
+ +KLG + V N+L+ V+ + RL DA L D + NTLI Y +AG +
Sbjct: 234 AHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRV 293
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
AR LFD MP R+AVSW +V GY Q+ EA+ LF M ++PD+ LV L+AC
Sbjct: 294 TDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAAC 353
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A+LG LEQGK +H Y++ N IR+ FL T LVD YAKCG + A+E+F+ +EKN+ W
Sbjct: 354 AQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWT 413
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
M+ GLAMHG G +L FS+M +KPD + +GAL C+H GLVD+ R+LFD M
Sbjct: 414 TMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRK 473
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ +++HYGCM DLL R GL+ EA EM++KMPM D +W L+ GCR H NVE+AE
Sbjct: 474 YGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEY 533
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+H ++L+P+ G Y +L ++YA + R +IR + + K GCS +++ G
Sbjct: 534 VVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKG 590
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 33/287 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F+ +P + S++ ++ + A+ LF++M+ + PD +L AC+Q
Sbjct: 296 ARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQ 355
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H + VF+ L
Sbjct: 356 LGVLEQGKWVHGYLKANNIRITVFL-------------------------------GTAL 384
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K G++ A ++F M ++ ++W T++ G A + EA++LF M L +KPD+
Sbjct: 385 VDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDD 444
Query: 244 IALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
IA + AL AC G +++G+ + + I+ +VD A+ G +N A E+ E
Sbjct: 445 IAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVE 504
Query: 303 SSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
K + W A++ G H L+ IE G +L
Sbjct: 505 KMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVL 551
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/494 (37%), Positives = 287/494 (58%), Gaps = 27/494 (5%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C TIK++ QIH + G F +L +L + T+ L A +F
Sbjct: 44 CDTIKKLKQIHTQIIVNG--FSQKNFLLVKLL-----------SFYITSGNLLNAHKVFE 90
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
I PST +N +IR H+ +P V L+++M P+ +++ FL+ C++
Sbjct: 91 RIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLRE 150
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCV---FHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H +V+ G+ +VFV SL+++Y + + +R A+ +FDEI+ R++VS N+L+ G
Sbjct: 151 GEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAG 210
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YV+ GD+ AR++FD MP R+ VSW T++AG AQ +C++A+ LF M +K D +AL
Sbjct: 211 YVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVAL 270
Query: 247 VSALSACARLGELEQGKNIHRYIEL-----NQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
V+ALSACA LG+L+ G IH YI+ NQ + S L+ L+ YA CG I+ A ++F
Sbjct: 271 VAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVS-LNNSLIHMYASCGVIDKAYKVF 329
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF---SRMIEARIKPDGVTILGALVGCSHAG 358
Q+++ +W +M+ G A G +L F R+ +PDG+T +G L CSHAG
Sbjct: 330 IGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAG 389
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
VD+ R F+ M +G+ ++HYGCM DLL RAG ++EA + + MPM + VW L
Sbjct: 390 FVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGAL 449
Query: 419 LGGCRIHGNVEIAEAAAEH-VMKLKPEDGGVYKV-LADVYANADRWEDVVKIRRSLDAGK 476
LGGCRIH N E+A A+ V++LKP+ Y V L++VYA A RW+DV +R+ +
Sbjct: 450 LGGCRIHKNAELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIG 509
Query: 477 IKKNAGCSLIQLNG 490
++K AG S +Q+NG
Sbjct: 510 VRKPAGRSWVQING 523
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 248/417 (59%), Gaps = 5/417 (1%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS----QLCSHSLAQTIH 134
+N +IRA + P A+ L++ + P ++ P LL++ + + LA +H
Sbjct: 174 HNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVH 233
Query: 135 SQVLKLGFICDVFVLNSLMHVYC-VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
+ +KLG + V N+L+ V+ + RL DA L D + NTLI Y +AG +
Sbjct: 234 AHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRV 293
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
AR LFD MP R+AVSW +V GY Q+ EA+ LF M ++PD+ LV L+AC
Sbjct: 294 TDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAAC 353
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A+LG LEQGK +H Y++ N IR+ FL T LVD YAKCG + A+E+F+ +EKN+ W
Sbjct: 354 AQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWT 413
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
M+ GLAMHG G +L FS+M +KPD + +GAL C+H GLVD+ R+LFD M
Sbjct: 414 TMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRK 473
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ +++HYGCM DLL R GL+ EA EM++KMPM D +W L+ GCR H NVE+AE
Sbjct: 474 YGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEY 533
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+H ++L+P+ G Y +L ++YA + R +IR + + K GCS +++ G
Sbjct: 534 VVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKG 590
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 33/287 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F+ +P + S++ ++ + A+ LF++M+ + PD +L AC+Q
Sbjct: 296 ARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQ 355
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H + VF+ +L+ +Y ++ A E+F + ++V++ T+
Sbjct: 356 LGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTM 415
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G G + EA++LF M L +KPD+
Sbjct: 416 IKGLAMHG-------------------------------RGSEALELFSQMERLGVKPDD 444
Query: 244 IALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
IA + AL AC G +++G+ + + I+ +VD A+ G +N A E+ E
Sbjct: 445 IAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVE 504
Query: 303 SSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
K + W A++ G H L+ IE G +L
Sbjct: 505 KMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVL 551
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 285/495 (57%), Gaps = 18/495 (3%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + C +KQ ++I + + G F+S + +L S SP L
Sbjct: 32 LETHLHNCHNLKQFNRILSQMILTG--FISDTFAASRLLKF--------STDSPFIG-LD 80
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
Y+L IF+ I + F +NT++RA+ +S A++L+ M ++ PD Y++P +++AC+
Sbjct: 81 YSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA 140
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ IH VLK+GF DV+V N+L+++Y V +RDA++LFDE D VS N+
Sbjct: 141 VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNS 200
Query: 183 LIDGYVKAGDLAH---ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
++ GYVK GD+ A +LF+ M +D VSW L++GY Q+ EEA+ +F M +
Sbjct: 201 ILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM 260
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV----DFYAKCGYIN 295
+ D + +VS LSACA L ++ GK IH + I L L+ D Y KCG +
Sbjct: 261 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVE 320
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+E+F +EK + +WNA+++GLA++GL SL FS M + P+ +T +G L C
Sbjct: 321 NALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACR 380
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GLVDE R F M +G+ +KHYGCM DLLGRAGL+ EA ++I+ MPM DV W
Sbjct: 381 HMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATW 440
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LLG C+ HG+ E+ E +++L+P+ G + +L++++A+ WEDV+++R +
Sbjct: 441 GALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQ 500
Query: 476 KIKKNAGCSLIQLNG 490
+ K GCSLI+ NG
Sbjct: 501 GVVKTPGCSLIEANG 515
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/483 (37%), Positives = 272/483 (56%), Gaps = 34/483 (7%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ RC ++ Q+ QIHA L L S + ++ A + + ++ A++
Sbjct: 24 LHRCSSLNQVKQIHAQVLKANLHRES--FVGQKLIAAFSLCRQ-----------MTLAVN 70
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN I P YNT+IRAH S PL A +F +M+ + D +++PFLL+ACS
Sbjct: 71 VFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVW 130
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ + IH+QV K+GF D+FV NSL+ Y L +A+ LFDE+ RD VS NT++DG
Sbjct: 131 VRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDG 190
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YVKAG++ A +LF++MP R+ VSW T+ AG +K D+ +
Sbjct: 191 YVKAGEMNAAFELFEKMPARNVVSWSTMEAG---------------------LKFDDGTV 229
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S LSACA G L GK +H IE + + + +S L+D YAKCG + A+ IF
Sbjct: 230 ISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVR 289
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K++ +WNA++ GLAMHG G +L FSRM PD VT +G L C+HAG VDE
Sbjct: 290 KDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHY 349
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F ME YGV E++HYGCM DLLGR G ++EA ++ MP+ + +W LLG CR+H
Sbjct: 350 FHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHS 409
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+AE + ++K + D G +L+++YA A W++ IR + + I+K +G S I
Sbjct: 410 ATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSI 469
Query: 487 QLN 489
+++
Sbjct: 470 EVD 472
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 41/213 (19%)
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
L +S R L Q K IH + + +SF+ L+ ++ C + A+ +F Q
Sbjct: 17 LEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQ 76
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS---------- 355
+ ++ +N ++ + L+ F M ++ + D T L CS
Sbjct: 77 DPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEM 136
Query: 356 -HA------------------------GLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
HA G + EAR+LFDEM VS + + D
Sbjct: 137 IHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVS-----WNTILDGY 191
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+AG + A E+ +KMP +V WS + G +
Sbjct: 192 VKAGEMNAAFELFEKMP-ARNVVSWSTMEAGLK 223
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/515 (35%), Positives = 285/515 (55%), Gaps = 44/515 (8%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ CK+ + + +IHA + G + + T YA++ + YA
Sbjct: 34 LQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSA------------RNIDYAFW 81
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F I YP ++S+ T+IR +P A+ + MR + + ++F F+L+A S
Sbjct: 82 VFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPS 141
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ + +H +++K+GF DVF N+L+H+Y + DA LFDE+ +VV+ NT+I G
Sbjct: 142 YQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITG 201
Query: 187 -------------------------------YVKAGDLAHARQLFDRMPFRDAVSWGTLV 215
Y K G + AR LFD MP RD VSWG+++
Sbjct: 202 CFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMI 261
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
+ Y Q+ + EA++LF MM + D+I + S LSACA++G L+ G+ IH Y++ +++R
Sbjct: 262 SAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLR 321
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
D FL T LVD YAKCG I+TA +F + KNL +WNAML GLA+HG G +L F +M
Sbjct: 322 NDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQM 381
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
+ P+ +T + L CSH G V+E K F++M+ + ++ +++HYGCM D+L R GL
Sbjct: 382 ESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGL 441
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
I EA EMI+ MP+ +V +W LL C++HG + E ++ KL EDGG Y +L+++
Sbjct: 442 INEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNI 501
Query: 456 YANADRWEDVVKIRRSLDA-GKIKKNAGCSLIQLN 489
+A +W +V K R+ + G KK G S I+L+
Sbjct: 502 FAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELD 536
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 51/242 (21%)
Query: 240 KPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGY-INTA 297
K N +SAL +C +L K IH + I QI+ D+F++T V+ YA I+ A
Sbjct: 24 KNSNYKTLSALQSCKSTEDL---KKIHAQLIITGQIK-DTFIATKTVESYAVSARNIDYA 79
Query: 298 IEIFESSQEKNLFTWNAMLVG----------LAMHGLGR-----LSLVYFSRMIEAR-IK 341
+F + ++W M+ G L +GL R L+ F +++A ++
Sbjct: 80 FWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLR 139
Query: 342 P---DGVTILGALVGCS----------------HAGLVDEARKLFDEMESVYGVSKELKH 382
P +G + G LV G + +A LFDEM + V+
Sbjct: 140 PSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMI 199
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
GC G E A + +MP +V W+ ++GG G+V+IA + + L
Sbjct: 200 TGCFG-----CGDTERARRLFGEMPE-RNVGSWNAVVGGYSKLGHVDIARS----LFDLM 249
Query: 443 PE 444
PE
Sbjct: 250 PE 251
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/430 (39%), Positives = 257/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ S+N++I + A+ + +M+ I PD + ++ +
Sbjct: 158 LDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSS 217
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL L + H + + G V + N+LM +Y L A++LFD + + +VS
Sbjct: 218 CAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSW 277
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
T++ GY ++G L A +LFD MP +D V W ++ GY +++ +EA+ LF M ++I
Sbjct: 278 TTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNIN 337
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + +VS LSAC++LG L+ G IH YIE +++ ++ L T L+D YAKCG I AI++
Sbjct: 338 PDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQV 397
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +N TW A++ GLA+HG ++ YFS MI+ + PD VT LG L C H GLV
Sbjct: 398 FQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLV 457
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E RK F +M S + +S +LKHY CM DLLGRAGL+EEA E+IK MP+ D VW L
Sbjct: 458 EEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFF 517
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHGNV + E AA ++++ P D G+Y +LA++Y A+ W++ K R+ + ++K
Sbjct: 518 ACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKT 577
Query: 481 AGCSLIQLNG 490
GCS I++NG
Sbjct: 578 PGCSSIEVNG 587
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 215/461 (46%), Gaps = 76/461 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +++CK+I Q+ QI + + GL I + + I+ + L Y
Sbjct: 11 SLLEKCKSISQLKQIQSQMVLTGL-----------IEDGFASSRLIAFCAISEWRDLDYC 59
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ-MRTVSIPPDFYSFPFLLRACSQ 123
+I N P+TFS+N IR +P AVVL+ + ++ PD Y++P L +AC++
Sbjct: 60 TNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACAR 119
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + I VL LGF D+FV N+++H+ L A+++FD+ RD+VS N++
Sbjct: 120 LSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSM 179
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+GYV+ G W EA+ + M IKPD
Sbjct: 180 INGYVRRG-------------------WAY------------EALNFYREMKVEGIKPDE 208
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++ +S+CA+L +L+ G+ H YIE N +++ L+ L+D Y KCG + +A ++F+S
Sbjct: 209 VTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDS 268
Query: 304 SQEKNLFTWNAMLVGLAMHGL-------------------------------GRLSLVYF 332
K + +W M+VG A GL G+ +L F
Sbjct: 269 MTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALF 328
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
+ M I PD VT++ L CS G +D + +E + +S + + D+ +
Sbjct: 329 NEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAK 387
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
G I +A+++ +++P G + W+ ++ G +HGN A A
Sbjct: 388 CGKITKAIQVFQELP-GRNSLTWTAIISGLALHGNAHGAIA 427
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 280/485 (57%), Gaps = 14/485 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
F++R K+ + +IHA + GL S + T + + + YA
Sbjct: 16 FLQRVKSRNEWKKIHACIIVHGL---SQSSFMVTKMVDLCD----------KLGDMDYAT 62
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQL 124
+FN + P+ F YN+IIRA+T S + + ++ Q+ +I PD ++FPF+ ++C+ L
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASL 122
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S L + +H + K G V N+L+ +Y F L DA ++FDE+ RDV+S N+L+
Sbjct: 123 GSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLL 182
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY + G + A+ LF M + VSW +++GY EA+ F M I+PD I
Sbjct: 183 SGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+L+S L +CA LG LE GK IH Y E + + + L++ Y+KCG ++ AI++FE +
Sbjct: 243 SLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQT 302
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+ K++ +W+ M+ G A HG + F M A++KP+G+T LG L CSH GL +
Sbjct: 303 KGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGL 362
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
K FD M Y + +++HYGC+ D+L RAG +E A+E+ K MP+ D +W LL CR
Sbjct: 363 KYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRT 422
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
GN+++A A +H+++++P+D G Y +LA++YA+ +WEDV ++R+ + +KK GCS
Sbjct: 423 KGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCS 482
Query: 485 LIQLN 489
LI++N
Sbjct: 483 LIEVN 487
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 194/551 (35%), Positives = 288/551 (52%), Gaps = 84/551 (15%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+ +C + Q+ Q+HA L L LF+ P K IS+ S +
Sbjct: 27 LHKCTNLNQVKQLHAQILKSNLHVDLFVVP--------------KLISAFS--LCRQMLL 70
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A + FN + YP+ YNT+IRAH+ S P A F M+ D ++FPFLL+ C+
Sbjct: 71 ATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTG 130
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY-----CVFHRLR--------------- 163
+ +++H+Q+ K GF+ DVFV NSL+ Y C +
Sbjct: 131 NVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSW 190
Query: 164 --------------DAQELFDEILYRDVVSCNTLIDGYV--------------------- 188
+A+++FDE+ +D +S NT++DGYV
Sbjct: 191 NSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVV 250
Query: 189 ----------KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
KAGD+ AR LFD+MP ++ VSW +V+G+A+ EAI LF M
Sbjct: 251 SWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKAC 310
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+K DN ++S L+ACA G L G+ IH I+ N + + +S LVD YAKCG +N A
Sbjct: 311 LKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAY 370
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F + K++ +WNAML GLAMHG G +L F RM E P+ VT++G L C+HAG
Sbjct: 371 DVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAG 430
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+D+ + F ME Y + E++HYGCM DLLGR G +EEA+ +I+ MPM + +W L
Sbjct: 431 LIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTL 490
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG CR+H VE+A +H+++L+P D G + +L+++YA A W V R + + K
Sbjct: 491 LGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTK 550
Query: 479 KNAGCSLIQLN 489
K +G S I++N
Sbjct: 551 KPSGASSIEVN 561
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 283/486 (58%), Gaps = 17/486 (3%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + KT + QIHAHFL GL + IL+ + T+ I YA
Sbjct: 14 HLLHNTKTQTHLPQIHAHFLRHGLHHSN--QILSHFVSVCTSLHQIP-----------YA 60
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLRACSQ 123
+IFN+ +P+ +N+II+AH+ F + F+ M+ T +I PD ++FP LL+A S
Sbjct: 61 TTIFNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSY 120
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + L Q +H+ V LGF V L+ VY ++ DA ++FDE+L+R+VV N +
Sbjct: 121 LRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIM 180
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+G+ K GDL +LF RM R VSW +++ AQ + EA +F M++ +PD+
Sbjct: 181 INGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDD 240
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIF 301
LV+ L CARLG+++ G+ IH Y + + + +S G LVDFY KCG + A ++F
Sbjct: 241 ATLVTVLPVCARLGDVDAGEWIHSYADGKGL-LRKVISVGNSLVDFYCKCGNLEAAWKVF 299
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+KN+ +WNAM+ GL ++G G L + F +M + P T +G L C+HAG VD
Sbjct: 300 NEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVD 359
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ R++FD M + +S +L+HYGC+ DLLGR G ++EA ++I+ MP+ + +W LL
Sbjct: 360 KGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSA 419
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR HG+ E+AE AA+ +++L+P + G Y +L++VYA +W +V K+R + IKKN
Sbjct: 420 CRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNP 479
Query: 482 GCSLIQ 487
G S +Q
Sbjct: 480 GQSALQ 485
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 299/516 (57%), Gaps = 48/516 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+RC++++QI Q+HA + +G FLS L +L+A ++ +++A +
Sbjct: 16 RRCRSLRQIKQVHALMVLRG--FLSDPSALRELLFA---------SAVAVRGAIAHAYLV 64
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVS---IPPDFYSFPFLLRACSQ 123
F+ IP P F YNT+IR ++P +AV L+++M R S + PD +FPF+LRAC+
Sbjct: 65 FDQIPRPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTA 124
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSL--MHVYC--------VFH-RLRD-------- 164
+ + +H+ V+K G D FV N+L MH C +F R R+
Sbjct: 125 MGAGGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAM 184
Query: 165 ------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
A++LFDE +D VS N +I Y K G++A AR LF+R+P RD VSW
Sbjct: 185 ITGCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWN 244
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+++G+ + A++LF M + KPD + ++S LSACA G+++ G+ +H +
Sbjct: 245 AMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEM 304
Query: 273 QIRVD--SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
+R L L+D YAKCG + +A+++F ++K++ TWN+++ GLA+HG S+
Sbjct: 305 FLRTGFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESID 364
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F +M++ +++PD +T + L+ CSH G+VD+ R+ F+ M+ Y + +KHYGCM D+L
Sbjct: 365 VFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDML 424
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
GRAGL++EA E I M + + +W LLG CR+HG +E+AE A ++K + ++ G Y
Sbjct: 425 GRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYV 484
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+L+++YA+A W + K+R+ +D + K AG +++
Sbjct: 485 LLSNIYASAGEWSESEKMRKLMDDSGVNKQAGRTVV 520
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 286/517 (55%), Gaps = 50/517 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+ CK I+ + QIHA + GL+ S ++ ++Y SAS L YA +
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLM--SNLSVVGELIY---------SASLSVPGALKYAHKL 68
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F+ IP P N ++R P V L+++M + PD Y+F F+L+ACS+L
Sbjct: 69 FDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWR 128
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLM--HVYC--------VFH----------------- 160
S H +V++ GF+ + +V N+L+ H C +F
Sbjct: 129 SNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGY 188
Query: 161 ----RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
++ +A LFDE+ Y+D V+ N +I G +K ++ AR+LFDR +D V+W +++
Sbjct: 189 AKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMIS 248
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
GY +EA+ +F M D PD + ++S LSACA LG+LE GK +H YI L V
Sbjct: 249 GYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI-LETASV 307
Query: 277 DSFLSTG------LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
S + G L+D YAKCG I+ AIE+F ++++L TWN ++VGLA+H S+
Sbjct: 308 SSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIE 366
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M ++ P+ VT +G ++ CSH+G VDE RK F M +Y + +KHYGCM D+L
Sbjct: 367 MFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDML 426
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
GRAG +EEA ++ M + + VW LLG C+I+GNVE+ + A E ++ ++ ++ G Y
Sbjct: 427 GRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 486
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+L+++YA+ +W+ V K+R+ D ++KK G SLI+
Sbjct: 487 LLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 268/468 (57%), Gaps = 18/468 (3%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS--PTTDPLSYALSIFNNIP 72
++ Q+HAH L SP L P+S +S SYA IF +
Sbjct: 30 ELKQLHAHLLKTN----SPLSSL-----------PLSRVASVCAFNSSFSYAKLIFQLLD 74
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+NT +R+ SP +A+ LF ++R I PD Y+ F+L+ACS+L +
Sbjct: 75 ASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKI 134
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H V KLG ++F+ N ++H+Y + + A+++FD++ RDV++ N +I VK GD
Sbjct: 135 VHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGD 194
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
A +LF MP R+ SW +++ GYAQ + +EAI LF M D + P+ + +V+ L A
Sbjct: 195 AEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVA 254
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA +G L G+ IH + + + + L+D Y KCG + A IF++ +E+ + +W
Sbjct: 255 CADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSW 314
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
+AM+ GLA HG +L F++MI +KP+ VT +G L CSH G+V++ RK F M
Sbjct: 315 SAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTR 374
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
YG+ ++HYGCM DL RAGL++EA E I MP+ + VW LLGGC++H NV++AE
Sbjct: 375 DYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAE 434
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL-DAGKIKK 479
A H+ KL P + G Y VL+++YA A RWEDV ++R+ + D G +K
Sbjct: 435 EATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGTWEK 482
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/417 (40%), Positives = 252/417 (60%), Gaps = 5/417 (1%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR--ACSQLCSHS--LAQTIH 134
++ +IRA + + P A+ L++ + + P ++ P LL+ A S + LA T+H
Sbjct: 40 HDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVH 99
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVF-HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
+ +KLG V V N+L+ V+ F L D L D + NTLI Y +AG L
Sbjct: 100 THAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRL 159
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A AR LFD MP R+AVSW +V GY Q+ EA+++F M D++PD+ LV L+AC
Sbjct: 160 ADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAAC 219
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A+ G LEQGK +H Y++ + I+++ F T LVD Y+KCG + A+++FE Q KN+ W
Sbjct: 220 AQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWT 279
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
M+ GLAMHG G +++ F++M + I+PD + +G L C+HAGLVD+ R+LFD M
Sbjct: 280 TMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRK 339
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ +++HYGCM DLL R G + EA EMI+KMPM D +W L+ GCR H NVE AE
Sbjct: 340 YGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEY 399
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
A+H + L+P+ G Y +L+++YA + R +IR + + K GCS +++NG
Sbjct: 400 VAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNG 456
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 136/324 (41%), Gaps = 39/324 (12%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
+ L+ F+ + ++H L GLL L T +TF + +A +
Sbjct: 105 LGLDRFVLVSNALIRVHAGFLGSLADGLLLLR-----TAAAVDASTFNTLITAYA-RAGR 158
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A ++F+ +P + S++ ++ + A+ +F++M+ + PD +L A
Sbjct: 159 LADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAA 218
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+Q + + +H + G ++F +L+ +Y ++ A ++F+ + Y++V++
Sbjct: 219 CAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAW 278
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
T+I G G + EA+ LF M I+
Sbjct: 279 TTMIKGLAMHG-------------------------------RGSEAVMLFAQMESSGIR 307
Query: 241 PDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD+IA + L AC G +++G+ + + I+ +VD A+ G++ A E
Sbjct: 308 PDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKE 367
Query: 300 IFES-SQEKNLFTWNAMLVGLAMH 322
+ + E + W A++ G H
Sbjct: 368 MIQKMPMEPDALIWGALMAGCRFH 391
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 301/554 (54%), Gaps = 91/554 (16%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+ +C + ++QIHA L L LF++P ++ A + + ++SA
Sbjct: 28 LHKCTNLDSVNQIHAQVLKANLHQDLFVAP-----KLIAAFSLCRHLASA---------- 72
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSS----PLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+++FN++P+P+ YN+IIRAH SS P NA F QM+ + PD +++PFLL+
Sbjct: 73 -VNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNA---FFQMQKNGLFPDNFTYPFLLK 128
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC------------VF-------- 159
ACS S L + IH+ V K+GF D+FV NSL+ Y +F
Sbjct: 129 ACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDV 188
Query: 160 -------------HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR 206
L+ A +LFDE+ RD+VS NT++DGY KAG++ A +LF+RMP+R
Sbjct: 189 VTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWR 248
Query: 207 DAVSWGTLVAGYAQS----------DQC---------------------EEAIQLFCNMM 235
+ VSW T+V GY++ D+C EA +L+ M
Sbjct: 249 NIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKME 308
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ ++PD+ L+S L+ACA G L GK IH + + R + + +D YAKCG ++
Sbjct: 309 EAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLD 368
Query: 296 TAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A ++F +K++ +WN+M+ G AMHG G +L FS M++ +PD T +G L C
Sbjct: 369 AAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCAC 428
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+HAGLV+E RK F ME VYG+ +++HYGCM DLLGR G ++EA +++ MPM + +
Sbjct: 429 THAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAII 488
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
LL CR+H +V++A A E + KL+P D G Y +L+++YA A W +V +R +
Sbjct: 489 LGTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKN 548
Query: 475 GKIKKNAGCSLIQL 488
+K +G S I++
Sbjct: 549 TGGEKPSGASSIEV 562
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 264/433 (60%), Gaps = 5/433 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN---AVVLFSQMRTVSIPPDFYSFPFL 117
L YA S+F + P P+T+ +NT+IRA +L P A+ ++ ++ + PD ++FPF+
Sbjct: 63 LRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFV 122
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ ++ + IH QV+ GF V V+ L+ +Y L DA+++FDE+L +DV
Sbjct: 123 LKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV 182
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
N L+ GY K G++ AR L + MP R+ VSW +++GYA+S + EAI++F M+
Sbjct: 183 NVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRML 242
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+++PD + L++ LSACA LG LE G+ I Y++ + L+ ++D YAK G I
Sbjct: 243 MENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+++FE E+N+ TW ++ GLA HG G +L F+RM++A ++P+ VT + L CS
Sbjct: 303 KALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACS 362
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H G VD ++LF+ M S YG+ ++HYGCM DLLGRAG + EA E+IK MP + +W
Sbjct: 363 HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIW 422
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL +H ++E+ E A ++KL+P + G Y +LA++Y+N RW++ +R +
Sbjct: 423 GSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGI 482
Query: 476 KIKKNAGCSLIQL 488
+KK AG S I++
Sbjct: 483 GVKKMAGESSIEV 495
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/433 (39%), Positives = 251/433 (57%), Gaps = 2/433 (0%)
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFL 117
P+ A +F+ P S+NT+I + +P A+ LF +M + PD +
Sbjct: 175 PMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAA 234
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ C Q+ L + +H V G C V ++N+LM +Y L A+ +F+ I +R V
Sbjct: 235 VSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTV 294
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VS T+I G+ K G + AR++FD MP RD W L+ GY Q QC+EA+ LF M +
Sbjct: 295 VSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEA 354
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ PD I +V+ L+AC++LG LE G +HRYIE +++ L T L+D YAKCG I A
Sbjct: 355 SVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKA 414
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
I IF+ EKN TW AM+ GLA HG ++ +F MIE KPD +T +G L C HA
Sbjct: 415 IHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHA 474
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLV E R+ F ME+ Y + +++KHY CM DLLGRAG ++EA +++ MPM D VW
Sbjct: 475 GLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGA 534
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
+ CR+ GN+ + E AA ++++ P D G+Y +LA++YA A+ + K+R + +
Sbjct: 535 IFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGV 594
Query: 478 KKNAGCSLIQLNG 490
+K GCS I+LNG
Sbjct: 595 EKVPGCSCIELNG 607
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 213/469 (45%), Gaps = 97/469 (20%)
Query: 18 QIHAHFLTKGLL--FLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPS 75
QIHAH L GLL F S +L TT + +SP + PL +AL++ +++P
Sbjct: 28 QIHAHLLAAGLLQDFSS---LLAAAYALSTTATATDARTSPPS-PLRHALALLSSLP--- 80
Query: 76 TFSYNTIIRAHTLFSS-------------PLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
+YN IRA +L PL +L R+ + PD +FPFLL+AC+
Sbjct: 81 ASAYNAAIRALSLSDDGDRHGHGVVRRCLPLYRALL----RSGTARPDHLTFPFLLKACA 136
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L + VL+LG DVFV+N+ H + + DA+ LFD RD+VS NT
Sbjct: 137 RLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNT 196
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LI GYV+ G+ A A +LF RM DAV ++PD
Sbjct: 197 LIGGYVRRGNPAEALELFWRMVAEDAV-----------------------------VRPD 227
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ +++A+S C ++ +LE G+ +H +++ + + L L+D Y KCG + A +FE
Sbjct: 228 EVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFE 287
Query: 303 SSQEKNLFTWNAMLVGLAMHGL-------------------------------GRLSLVY 331
+ + + +W M+VG A GL + +L
Sbjct: 288 RIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSL 347
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEA---RKLFDEMESVYGVSKELKHYGCMAD 388
F M EA + PD +T++ L CS G ++ + ++ V+ V+ + D
Sbjct: 348 FHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTS----LID 403
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+ + G IE+A+ + K++P + W+ ++ G HG+ A A EH
Sbjct: 404 MYAKCGNIEKAIHIFKEIP-EKNALTWTAMICGLANHGH---ANEAIEH 448
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 290/492 (58%), Gaps = 19/492 (3%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
N R +++ H++H+H + G F S + +++ + F L+ A
Sbjct: 119 NSCARLSSLEPGHEVHSHIIKHG--FESDLFVRNALIHLYSVF-----------GNLNLA 165
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
++F+ SYNT+I+ + + P +A+ LF +M+ I PD ++F L CS L
Sbjct: 166 RTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVL 225
Query: 125 CSHSLAQTIHSQVLK--LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVSCN 181
++ + IH+QV K ++ + ++++ +Y + A+ +F + + + +
Sbjct: 226 NEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWS 285
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+++ GY + G++ AR+LF+ M RD +SW +++GY+Q+ QC EA++LF M L IKP
Sbjct: 286 SMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKP 345
Query: 242 DNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D + LV+ LSACARLG + GK + H+YIE ++ L+ ++D YAKCG I++A+EI
Sbjct: 346 DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEI 405
Query: 301 FE--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
F K F +N+M+ GLA HGLG ++ F +I +KPD VT +G L C H+G
Sbjct: 406 FRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSG 465
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L++E +KLF+ M + YG+ +++HYGCM DLLGR G +EEA ++++KMP + +W L
Sbjct: 466 LIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRAL 525
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR HGNV+I E A + +++++ + G Y +L+++ A+A++WE+ ++R+ ++ I+
Sbjct: 526 LSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIR 585
Query: 479 KNAGCSLIQLNG 490
K G S I+L G
Sbjct: 586 KPPGWSYIELGG 597
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 221/478 (46%), Gaps = 79/478 (16%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ CK+ KQ QIHA + GL H + +I I+ F + S D L ++
Sbjct: 15 LLESCKSFKQGLQIHAQTIVNGLH-----HQIFSISRLISFFSLLGS-----KDGLDHSR 64
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSI-PPDFYSFPFLLRACSQL 124
+F+ I P+ F +NT+IR ++ +P A+VL+ M I PP+ ++FPFLL +C++L
Sbjct: 65 LLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARL 124
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S +HS ++K GF D+FV N+L+H+Y VF L A+ LFDE L RD+VS NT+I
Sbjct: 125 SSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMI 184
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GYA+ +Q E A+ LF M + I PD
Sbjct: 185 K-------------------------------GYAEVNQPESALCLFGEMQNSGILPDEF 213
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIEIFE 302
V+ S C+ L E GK IH + N +DS L + +VD YAKCG IN A +F
Sbjct: 214 TFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFS 273
Query: 303 S--------------------------------SQEKNLFTWNAMLVGLAMHGLGRLSLV 330
+ E+++ +W AM+ G + G +L
Sbjct: 274 TMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALE 333
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M IKPD VT++ L C+ G D ++L+ + ++ + D+
Sbjct: 334 LFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMY 393
Query: 391 GRAGLIEEALEMIKKMPMGGDV-FVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPED 445
+ G I+ ALE+ +++ FV++ ++ G HG E A ++ LKP++
Sbjct: 394 AKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDE 451
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 167/487 (34%), Positives = 272/487 (55%), Gaps = 43/487 (8%)
Query: 34 CHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPL 93
C+++ + A++TF + + YA+ + + P+ F YN +I+ P+
Sbjct: 14 CYLMNQFISALSTF-----------NRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPV 62
Query: 94 NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLM 153
A+ L+ QM ++ P Y+FP L++AC + A+ +H V + GF VFV SL+
Sbjct: 63 QALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLV 122
Query: 154 HVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
Y R+ ++ +FDE+ RDV + T++ G V+ GD++ A +LFD MP R+ +W T
Sbjct: 123 DFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNT 182
Query: 214 LVAGYA-------------------------------QSDQCEEAIQLFCNMMDLDIKPD 242
L+ GYA Q+ + EA+ +F M I PD
Sbjct: 183 LIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPD 242
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ + + +SACA LG L+ GK IH YI + +D ++ + L+D YAKCG ++ ++ +F
Sbjct: 243 EVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFF 302
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+EKNLF WN+++ GLA+HG +L F +M +IKP+GVT + L C+HAGL++E
Sbjct: 303 KLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEE 362
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
RK F M + + ++HYGCM DLL +AGL+EEAL++I+ M + + +W LL GC
Sbjct: 363 GRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGC 422
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL-DAGKIKKNA 481
++H N+EIA+ AA +M L+P + G Y +L ++ A +RW + KIR ++ + G K+
Sbjct: 423 KLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCP 482
Query: 482 GCSLIQL 488
G S I++
Sbjct: 483 GSSWIEM 489
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 64/336 (19%)
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
+D N I + +A + +M + + ++ G+ QS Q +A++L+ M
Sbjct: 12 QDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQM 71
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ ++ P + S + AC + +L + +H ++ N F+ T LVDFY+ G I
Sbjct: 72 LRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRI 131
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLA----MHGLGRL-------SLVYFSRMIE--ARIK 341
++ +F+ E+++F W M+ GL M GRL +L ++ +I+ AR++
Sbjct: 132 EESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLR 191
Query: 342 PDGVTIL-------------GALVGC-SHAGLVDEARKLFDEMESVYGVS---------- 377
V L ++ C S EA +F+EM +G+S
Sbjct: 192 EVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAK-HGISPDEVTMATVI 250
Query: 378 ------------KELKHY-------------GCMADLLGRAGLIEEALEMIKKMPMGGDV 412
KE+ +Y + D+ + G ++ +L M K+ ++
Sbjct: 251 SACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKL-REKNL 309
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
F W+ ++ G +HG E A A + + + K + GV
Sbjct: 310 FCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGV 345
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 266/425 (62%), Gaps = 6/425 (1%)
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP----PDFYSFPFLLRACSQLCSH 127
P P +N +IR ++ + + LF +M T+ P PD Y+F F++ +CS S
Sbjct: 135 PSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISL 194
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+ +H V+K GF +++V NS++++ VF R+ DA+++F+++ RDV S +L+ GY
Sbjct: 195 IYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGY 254
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIAL 246
K G++ A +LF+ MP R+ VSW +++G+ + EA+ FCNM+ D + P+ L
Sbjct: 255 AKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVL 314
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
V LSACA LG L+QG IH YI+ IR S +ST L+D YAKCG I+ A +F +
Sbjct: 315 VCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICK 374
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+++ ++ +M+ GL+ HGLG+ +L F +M++ + P+ +TILG L GCSH+GLV+E +
Sbjct: 375 RDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSI 434
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
MES++G++ +++HYGC DLLGRAG +E ALE++K MPM D+ +W LL RIH
Sbjct: 435 LANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHH 494
Query: 427 NVEIAEAAAEHVMKLKPED-GGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
NV + E H+ +LK D G +L+++YA+ RWE V ++R+ + + + + GCS
Sbjct: 495 NVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSW 554
Query: 486 IQLNG 490
I++NG
Sbjct: 555 IEVNG 559
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/489 (35%), Positives = 286/489 (58%), Gaps = 18/489 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K C I ++ +IHAH + L + + +T + + + T YA
Sbjct: 21 LKNCPNIVELKKIHAHIVKFSL---------SQSSFLVTKMVDVCNHHAET----EYANL 67
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-----IPPDFYSFPFLLRAC 121
+F + P+ F YN +IRA+ + A+ ++ QM S I PD ++FPF++++C
Sbjct: 68 LFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSC 127
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L + L + +H V K G + V NSL+ +Y L DA ++F+E+ RD VS N
Sbjct: 128 AGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWN 187
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
TLI G+V+ G + AR +F+ M + SW +V+GYA+ +A++ F M + I+P
Sbjct: 188 TLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEP 247
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D I+LVS L ACA+LG LE GK IH Y + + + L++ YAKCG I+ +F
Sbjct: 248 DEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLF 307
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ E+++ +W+ M+VGLA HG ++ F M +A+I+P+ +T +G L C+HAGL++
Sbjct: 308 DQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLN 367
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E + F+ M+ Y + ++HYGC+ +LLG +G +++ALE+IKKMPM D +W LL
Sbjct: 368 EGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSS 427
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR H N+EIA A EH+++L+P D G Y +L+++YA+ +W+ V ++R+ + + +KK
Sbjct: 428 CRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTP 487
Query: 482 GCSLIQLNG 490
GCS I+++
Sbjct: 488 GCSSIEVDN 496
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 251/423 (59%), Gaps = 2/423 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F IP S+ TII + A+ ++ M + P+ L+ AC +
Sbjct: 269 ARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGR 328
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S Q H +++ GF C F+ +++H Y + A F+ V S N L
Sbjct: 329 TMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNAL 388
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+V+ G + ARQLFD MP RD SW ++++GY+Q++Q + A+QLF M+ ++P+
Sbjct: 389 ISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNE 448
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I +VS SA A LG L +G+ H YI N I ++ L+ L+D YAKCG I A+++F
Sbjct: 449 ITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYE 508
Query: 304 SQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
Q++ ++ WNA++ GLAMHG +SL FS++ RIKP+ +T +G L C HAGLVD
Sbjct: 509 IQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVD 568
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
K F M+++Y + +KHYGCM DLLGRAG ++EA EMI+KMPM DV +W LL
Sbjct: 569 TGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAA 628
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR HGNVEI E AAE++ KL G +L+++YA+A RW+D +RR++ + ++KK+
Sbjct: 629 CRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSP 688
Query: 482 GCS 484
GCS
Sbjct: 689 GCS 691
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 229/499 (45%), Gaps = 56/499 (11%)
Query: 1 MTLNNFIKRCKTI---KQIHQIHAHFLTKGLL-----------FLSPCHILT---TILYA 43
+TL + +K C ++ Q QIH+ GLL F C +++ ++
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 44 ITTFKPISS----ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF 99
+ P+S A + L A +F +P SY T++ + L A+ +F
Sbjct: 113 CSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVF 172
Query: 100 SQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
MR + P+ + ++ A S + + +H+ KLG V +L+H+YCV
Sbjct: 173 KDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVC 232
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
L +A+ LFDEI R+VV+ N +++GY K+G + AR LF+R+P +D VSWGT++ GY
Sbjct: 233 SSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYV 292
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
Q ++ EA++++ +M+ + P+ + +V +SAC R + +G+ H I F
Sbjct: 293 QIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDF 352
Query: 280 LSTGLVDFYAKCGYINTAI-------------------------------EIFESSQEKN 308
+ ++ FYA CG IN A ++F+ E++
Sbjct: 353 IQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERD 412
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+F+W++M+ G + + L+L F M+ ++P+ +T++ + G + E R +
Sbjct: 413 VFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHE 472
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP-MGGDVFVWSGLLGGCRIHG- 426
+ S + + D+ + G I AL++ ++ V W+ ++ G +HG
Sbjct: 473 YILS-NSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGH 531
Query: 427 -NVEIAEAAAEHVMKLKPE 444
NV + + +++KP
Sbjct: 532 ANVSLKLFSQLQRVRIKPN 550
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 278/485 (57%), Gaps = 14/485 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
F++R K+ + +I+A + GL S + T + + + YA
Sbjct: 16 FLQRVKSRNEWKKINASIIIHGL---SQSSFMVTKMVDFCD----------KIEDMDYAT 62
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQL 124
+FN + P+ F YN+IIRA+T S + + ++ Q+ S PD ++FPF+ ++C+ L
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S L + +H + K G V N+L+ +Y F L DA ++FDE+ RDV+S N+L+
Sbjct: 123 GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY + G + A+ LF M + VSW +++GY EA+ F M I+PD I
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+L+S L +CA+LG LE GK IH Y E + + L++ Y+KCG I+ AI++F
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+ K++ +W+ M+ G A HG ++ F+ M A++KP+G+T LG L CSH G+ E
Sbjct: 303 EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGL 362
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ FD M Y + +++HYGC+ D+L RAG +E A+E+ K MPM D +W LL CR
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRT 422
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
GN+++A A +H+++L+PED G Y +LA++YA+ +WEDV ++R+ + +KK G S
Sbjct: 423 PGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Query: 485 LIQLN 489
LI++N
Sbjct: 483 LIEVN 487
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 285/517 (55%), Gaps = 50/517 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+ CK + + QIHA + GL+ S ++ ++Y SAS L YA +
Sbjct: 20 QNCKNFRTLMQIHAFMVVNGLM--SNLSVVGELIY---------SASLSVPGALKYAHKL 68
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F IP P N ++R P V L+++M + PD Y+F F+L+ACS+L
Sbjct: 69 FEEIPKPDVSICNHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWR 128
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLM--HVYC--------VFH----------------- 160
S IH +V++ GF+ + +V N+L+ H C +F
Sbjct: 129 SNGFAIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGY 188
Query: 161 ----RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
++ +A LFDE+ +D V+ N +I G +K ++ AR+LFDR +D V+W +++
Sbjct: 189 AKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMIS 248
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
GY +EA+ +F M D PD + ++S LSACA LG+LE GK +H YI L V
Sbjct: 249 GYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI-LETASV 307
Query: 277 DSFLSTG------LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
S + G L+D YAKCG I+ AIE+F ++++L TWN ++VGLA+H S+
Sbjct: 308 SSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALHH-AEGSVE 366
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M ++ P+ VT +G ++ CSH+G VDE RK F M +Y + +KHYGCM D+L
Sbjct: 367 MFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDML 426
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
GRAGL+EEA ++ M + + VW LLG C+I+GNVE+ + A E ++ ++ ++ G Y
Sbjct: 427 GRAGLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 486
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+L+++YA+ +W+ V K+R+ D ++KK G SLI+
Sbjct: 487 LLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGISLIE 523
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 282/494 (57%), Gaps = 50/494 (10%)
Query: 2 TLNNFIKRC---KTIKQIHQIHAHFLTKGLLFLSPCHILTTIL--YAITTFKPISSASSP 56
T+ +K C + +++ ++H + GL S ++ T++ YA+
Sbjct: 127 TIPFVLKACAESRAVREGEEVHGQAIKMGLA--SDVYVSNTLMRMYAVC----------- 173
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
D + A +F+ P S+ T+I+ + V LF +M ++ D +
Sbjct: 174 --DVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVI 231
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L +C++L L + +H +++ NS +++ D
Sbjct: 232 VLSSCARLGDLRLGRKLHRYIIR----------NSNVNL--------------------D 261
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V N L+D Y+K GD AR++F MP ++ VSW ++++G AQ Q +E++ +F M
Sbjct: 262 VFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQR 321
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
L +KPD++ LV+ L++CA LG LE GK +H Y++ NQIR D F+ LVD YAKCG I+
Sbjct: 322 LGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQ 381
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A +F++ K+++++ AM+VGLAMHG G +L FS M + I+PD VT +G L CSH
Sbjct: 382 ACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSH 441
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
GLV+E RK F++M ++Y + +L+HYGCM DLLGRAGLI EA E I+ MP+ D FV
Sbjct: 442 VGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLG 501
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG C+IHG VE+ E+ + + K++P G Y +++++Y++A+RW D +K+R+++
Sbjct: 502 ALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERN 561
Query: 477 IKKNAGCSLIQLNG 490
++K GCS I+L+G
Sbjct: 562 LEKTPGCSSIELDG 575
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/427 (31%), Positives = 217/427 (50%), Gaps = 52/427 (12%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ CK+IK + QIHA + SP LT I+T A S DP YALS
Sbjct: 29 LQTCKSIKGLKQIHASIIKT---MPSPDAQLT-----ISTRLSALCAQSLPIDP-RYALS 79
Query: 67 IFNNIPYPSTFSYNTIIRA-HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+ + P+ YN IIR T + + +V++ QM + I PD Y+ PF+L+AC++
Sbjct: 80 LLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESR 139
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + +H Q +K+G DV+V N+LM +Y V +R A+++FD RD+VS T+I
Sbjct: 140 AVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQ 199
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GYVK G F R E + LF M +++ D +
Sbjct: 200 GYVKMG--------FAR-----------------------EGVGLFFEMCGENLQADGMT 228
Query: 246 LVSALSACARLGELEQGKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
LV LS+CARLG+L G+ +HRYI N + +D F+ LVD Y KCG N A ++F+
Sbjct: 229 LVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEM 288
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
KN+ +WN+M+ GLA G + SL F +M +KPD VT++ L C++ G+++ +
Sbjct: 289 PVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGK 348
Query: 365 KLFDEMESVYGVSKELKHYG----CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ Y +++ G + D+ + G I++A + + M DV+ ++ ++
Sbjct: 349 WVH-----AYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNR-KDVYSYTAMIV 402
Query: 421 GCRIHGN 427
G +HG
Sbjct: 403 GLAMHGQ 409
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 263/433 (60%), Gaps = 5/433 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLF---SSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
L YA S+F + P+P+T+ +NT+IRA +L ++ A+ ++ + PD ++FPF+
Sbjct: 63 LRYAYSVFTHQPFPNTYLHNTMIRALSLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFV 122
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ ++ + +H Q + GF V V+ L+ +Y L DA+++FDE+ RDV
Sbjct: 123 LKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDV 182
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
N L+ GY K G++ AR L + MP R+AVSW +++GYA+S + EAI++F M+
Sbjct: 183 NVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRML 242
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
++ PD + L++ LSACA LG LE G+ I Y++ + L+ ++D YAK G I
Sbjct: 243 MENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+E+FES E+N+ TW ++ GLA HG G +LV F RM++A +KP+ VT + L CS
Sbjct: 303 KALEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACS 362
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H G VD + F+ M S YG++ ++HYGCM DLLGRAG + EA E+IK MP + +W
Sbjct: 363 HVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIW 422
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL +H ++++ E A ++KL+P + G Y +LA++Y+N RW++ +R+ +
Sbjct: 423 GSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGI 482
Query: 476 KIKKNAGCSLIQL 488
+KK AG S I++
Sbjct: 483 GVKKLAGESSIEV 495
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 293/502 (58%), Gaps = 19/502 (3%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++F +R + +++I TK + + ++ +++A+ F P S S+ + L
Sbjct: 21 SDFEQRLQAVRRIENKTIGLGTKTKIGAAVAFLVFGLVFALGDFLP--SGSNSSAHHLLS 78
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +I PST +N +IRAH +P ++ F+QM PD +++ FLL AC+
Sbjct: 79 AHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACTS 138
Query: 124 LCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVF-----HRLRDAQELFDEILYRDV 177
S Q +HS+VL G+ +VF+++ L++ Y L A+++FD++ R+V
Sbjct: 139 SLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSERNV 198
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V N+++ GY++ G+L AR++F MP R+ VSW T+++GYA++ +C++A+ LF M
Sbjct: 199 VCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKA 258
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIE-----LNQIRVDSFLSTGLVDFYAKCG 292
++ D + L++AL+ACA LG+L+ G IH YI+ NQ RV L+ L+ YA CG
Sbjct: 259 GVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQ-RVLVSLNNALIHMYASCG 317
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF---SRMIEARIKPDGVTILG 349
I+ A E+F E++ +W +++ A G + L F R+ + +PDG+T +G
Sbjct: 318 MIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIG 377
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L CSHAGLVDE R+LF +M +G+ ++HYGCM DLL RAG ++EA E+I MP+
Sbjct: 378 VLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELIATMPVK 437
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPED--GGVYKVLADVYANADRWEDVVK 467
+ VW LLGGCR + N E+A ++ ++ D G +LA VYA+A++W+DV
Sbjct: 438 PNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYASAEKWQDVAT 497
Query: 468 IRRSLDAGKIKKNAGCSLIQLN 489
+R+ + A +KK AG S +Q+N
Sbjct: 498 VRQKMVAMGVKKPAGQSWVQIN 519
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/517 (34%), Positives = 293/517 (56%), Gaps = 50/517 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+RC++++ I Q+HA +G FLS L +L+A ++ +++A +
Sbjct: 16 RRCRSLRHIKQMHAVMALRG--FLSDPSELRELLFA---------SAVAVRGAIAHAYLV 64
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM----RTVSIPPDFYSFPFLLRACSQ 123
F+ IP P F YNT+IR ++P +AV L+++M + PD +FPF+LRAC+
Sbjct: 65 FDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTA 124
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSL--MHVYC--------VFH-RLRD-------- 164
+ + +H+ V+K G D FV N+L MH C +F R R+
Sbjct: 125 MGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAM 184
Query: 165 ------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
A++LFDE +D+VS N +I Y K GD+A AR+LFD++P RD VSW
Sbjct: 185 ITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWN 244
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+++GY + A++LF M + KPD + ++S LSACA G+L+ G+ +H + +
Sbjct: 245 VMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLS-D 303
Query: 273 QIRVDSF---LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
+ F L L+D YAKCG + +A E+F S ++K++ TWN+++ GLA+HG S+
Sbjct: 304 MFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESI 363
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F +M++ +++PD +T + L+ CSH G+VD+ R+ F+ M+ Y V +KHYGCM D+
Sbjct: 364 DMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDM 423
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
LGRAGL++EA E I M + +W LL CR+HG +E+A+ A ++K + ++ G Y
Sbjct: 424 LGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDY 483
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+L+++YA+ W K+R+ +D + K AG + +
Sbjct: 484 VLLSNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFV 520
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/482 (36%), Positives = 277/482 (57%), Gaps = 16/482 (3%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFK-PISSASSPTTDPLSYALSIF 68
CK + QI Q+HA L GL C++L ++ +T P+ DP Y LSIF
Sbjct: 56 CKNLTQIKQVHARILLNGLD--QSCYVLAKLIRTLTKLNIPV--------DP--YPLSIF 103
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
N + YP+ F YN +IR + + + +S MR + P ++F L +AC
Sbjct: 104 NQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVG 163
Query: 129 LAQTIHSQ-VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L + IH Q +L GF D+ V NS++ +Y L +++FDE+ RDV+S LI Y
Sbjct: 164 LGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAY 223
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
VK+G++ A +LFD +P +D V+W +V+G+AQ+ + EAI F M + ++ D I L+
Sbjct: 224 VKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLI 283
Query: 248 SALSACARLGELEQGKNIHRYIELNQI--RVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+SACA+LG + I E ++ + + + L+D Y+KCG + A +F+ +
Sbjct: 284 GVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMK 343
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E+N++++++M++G AMHG ++ F M++ IKP+ VT +G L CSHAG+V++ +
Sbjct: 344 ERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQ 403
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+F+ ME YG+ HY CM DLLGRAG ++EA E++K MP+ VW LLG CRIH
Sbjct: 404 IFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIH 463
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
+ +IA AA H+ +L+P G Y +LA++YA+ RW DV +R+ + ++KN S
Sbjct: 464 KSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSW 523
Query: 486 IQ 487
I+
Sbjct: 524 IE 525
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 258/430 (60%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A +F+ ++N +I + ++ LF +M + + P + +L A
Sbjct: 170 VSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSA 229
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS+L ++ + +H V L + N+L+ +Y + A +FD + RDV+S
Sbjct: 230 CSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISW 289
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++ G+ G + AR FD+MP RD VSW ++ GY Q ++ +E + LF M +IK
Sbjct: 290 TAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +VS L+ACA LG LE G+ I YI+ N+I++DSF+ L+D Y CG + AI I
Sbjct: 350 PDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRI 409
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + ++ +W A++ GLA++G G +L FS+M++A I PD VT +G L C+H+G+V
Sbjct: 410 FNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMV 469
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ +K F M + +G+ + HYGCM DLLGRAG ++EA E+IK MP+ + VW LLG
Sbjct: 470 DKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLG 529
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+H + E+AE AA+ +++L+PE+G VY +L ++YA +RWE + ++R+ + IKK
Sbjct: 530 ACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKT 589
Query: 481 AGCSLIQLNG 490
GCSLI++NG
Sbjct: 590 PGCSLIEMNG 599
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 213/462 (46%), Gaps = 83/462 (17%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ IK CK++ Q+ QIH+ + GL I I + I+ + YA
Sbjct: 24 SLIKTCKSMAQLKQIHSQTICTGL-----------ISNPIVPAQIIAFCCKHELGDMEYA 72
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ +P P+ F +N +I+ ++ P +AV ++ +M + PD Y++PFLL+ ++
Sbjct: 73 RMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRD 132
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H ++KLGF +VFV N+L+H+Y + + A+ +FD DVV+ N +I
Sbjct: 133 TAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMI 192
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY +S Q +E+++LF M + + P +I
Sbjct: 193 SGY-------------------------------NRSKQFDESMKLFDEMERMRVLPSSI 221
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
LVS LSAC++L +L GK +HRY++ +I L L+D YA CG ++TA+ IF++
Sbjct: 222 TLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNM 281
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--------------------------- 337
+ +++ +W A++ G G L+ YF +M E
Sbjct: 282 KSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFR 341
Query: 338 ----ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK----HYGCMADL 389
A IKPD T++ L C+H G ++ E Y E+K + D+
Sbjct: 342 EMQAANIKPDEFTMVSILTACAHLGALE-----LGEWIKAYIDKNEIKIDSFVGNALIDM 396
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G +E+A+ + MP D W+ ++ G I+G E A
Sbjct: 397 YFNCGNVEKAIRIFNAMPH-RDKISWTAVIFGLAINGYGEEA 437
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/554 (34%), Positives = 298/554 (53%), Gaps = 91/554 (16%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+ +C + ++QIHA L L LF++P ++ A + + ++SA
Sbjct: 28 LHKCSNLDSVNQIHAQVLKANLHQDLFVAP-----KLIAAFSLCRHLASA---------- 72
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSS----PLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+++FN++P+P+ YN+IIRAH +S P NA F QM+ + PD +++PFLL+
Sbjct: 73 -VNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNA---FFQMQKNGLFPDNFTYPFLLK 128
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC--------------VFHRLRD- 164
AC+ S L + IH+ V K GF D+FV NSL+ Y + + RD
Sbjct: 129 ACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDV 188
Query: 165 ------------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR 206
A +LFDE+ RD+VS NT++DGY KAG++ A +LF+RMP R
Sbjct: 189 VTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQR 248
Query: 207 DAVSWGTLVAGYAQS----------DQC---------------------EEAIQLFCNMM 235
+ VSW T+V GY++ D+C EA +L+ M
Sbjct: 249 NIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKME 308
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ ++PD+ L+S L+ACA G L GK IH + + R + + +D YAKCG ++
Sbjct: 309 EAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLD 368
Query: 296 TAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A ++F +K++ +WN+M+ G AMHG G +L FSRM+ +PD T +G L C
Sbjct: 369 AAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCAC 428
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+HAGLV+E RK F ME VYG+ +++HYGCM DLLGR G ++EA +++ MPM + +
Sbjct: 429 THAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAII 488
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
LL CR+H +V+ A A E + K++P D G Y +L+++YA A W +V +R +
Sbjct: 489 LGTLLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMN 548
Query: 475 GKIKKNAGCSLIQL 488
+K +G S I++
Sbjct: 549 TGGQKPSGASSIEV 562
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/547 (35%), Positives = 287/547 (52%), Gaps = 77/547 (14%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ RC ++ Q+ QIHA L L S + ++ A + + ++ A++
Sbjct: 24 LHRCSSLNQVKQIHAQVLKANLHRES--FVGQKLIAAFSLCRQ-----------MTLAVN 70
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN I P YNT+IRAH S PL A +F +M+ + D +++PFLL+ACS
Sbjct: 71 VFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVW 130
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVY--C----------VFH-------------- 160
+ + IH+QV K+GF D+FV NSL+ Y C VF
Sbjct: 131 VRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMI 190
Query: 161 -------RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
L +A+ LFDE+ RD VS NT++DGYVKAG++ A +LF++MP R+ VSW T
Sbjct: 191 GGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWST 250
Query: 214 LV-------------------------------AGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+V +GYA+ ++AI L+ M + +K D
Sbjct: 251 MVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFD 310
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ ++S LSACA G L GK +H IE + + + +S L+D YAKCG + A+ IF
Sbjct: 311 DGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFH 370
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K++ +WNA++ GLAMHG G +L FSRM PD VT +G L C+HAG VDE
Sbjct: 371 GMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDE 430
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
F ME YGV E++HYGCM DLLGR G ++EA ++ MP+ + +W LLG C
Sbjct: 431 GLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGAC 490
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R+H +AE + ++K + D G +L+++YA A W++ IR + + I+K +G
Sbjct: 491 RMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSG 550
Query: 483 CSLIQLN 489
S I+++
Sbjct: 551 GSSIEVD 557
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 163/413 (39%), Positives = 251/413 (60%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
S+N+II + A L+ +M +++ PD + ++ A +QL + +L + +H +
Sbjct: 223 SWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSI 282
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
++G V + N+LM +Y + A+ LF+ + + VVS T++ GY K G L A
Sbjct: 283 EEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAV 342
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
+LF+ MP +D V W L+ G+ Q+ + +EA+ LF M + PD I +V+ LSAC++LG
Sbjct: 343 RLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLG 402
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
L+ G +H Y++ + + ++ L T LVD YAKCG I AI++FE +N TW A++
Sbjct: 403 ALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIIC 462
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GLA+HG ++ YFS MI + PD +T +G L C H GLVD+ R F +M S YG+S
Sbjct: 463 GLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGIS 522
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+LKHY C+ DLLGRAG +EEA E+I+ MP D VW L G RIHGNV + E AA
Sbjct: 523 PKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASK 582
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++L P DGG+Y +LA++Y +A+ WE K+R+ ++ ++K GCS I++NG
Sbjct: 583 LLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNG 635
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 212/459 (46%), Gaps = 76/459 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C ++ ++ +IHA ++ GL+ S L+ ++ F IS + L Y
Sbjct: 59 SLLEACTSMAKMKEIHAQMISTGLI--SDGFALSRLV----AFCAISEWRN-----LDYC 107
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQ 123
I NN + FS+N IR + +P+NAV+L+ M R S PD Y++P L + C+
Sbjct: 108 DKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAG 167
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A I V++LGF D+FV N+++HV L A++LFDE RD+VS N++
Sbjct: 168 FSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSI 227
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+GYV+ G +EA L+ M +L++ PD
Sbjct: 228 INGYVRCG-------------------------------LADEAFDLYYKMGELNVMPDE 256
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++ +SA A+L L G+ +H+ IE + + L+ L+D Y KC I A +FE+
Sbjct: 257 VTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFEN 316
Query: 304 SQEKNLFTWNAMLVGLAMHGL-------------------------------GRLSLVYF 332
+K + +W M++G A GL + +L F
Sbjct: 317 MTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALF 376
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
M + + PD +T++ L CS G +D + ++ + ++ + + D+ +
Sbjct: 377 HEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAK 435
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G I++A+++ ++MP G + W+ ++ G +HG A
Sbjct: 436 CGNIKKAIQVFEEMP-GRNSLTWTAIICGLALHGQPHAA 473
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 141/321 (43%), Gaps = 37/321 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A+ +FN +P +N +I A+ LF +M+ S+ PD + L A
Sbjct: 338 LESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSA 397
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CSQL + L +G MH Y H L +V
Sbjct: 398 CSQLGA-----------LDVGI---------WMHHYVDKHNLT-----------MNVALG 426
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D Y K G++ A Q+F+ MP R++++W ++ G A Q AI F M+ + +
Sbjct: 427 TALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAI 298
PD I + LSAC G ++QG++ + Y ++ + L + LVD + G++ A
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRD-YFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAE 545
Query: 299 EIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
E+ S E + W A+ G +HG + S+++E G+ +L A + A
Sbjct: 546 ELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANM-YGDA 604
Query: 358 GLVDEARKLFDEMESVYGVSK 378
+ ++ARK+ ME GV K
Sbjct: 605 NMWEQARKVRKMMEE-RGVEK 624
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 163/413 (39%), Positives = 251/413 (60%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
S+N+II + A L+ +M +++ PD + ++ A +QL + +L + +H +
Sbjct: 223 SWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSI 282
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
++G V + N+LM +Y + A+ LF+ + + VVS T++ GY K G L A
Sbjct: 283 EEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAV 342
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
+LF+ MP +D V W L+ G+ Q+ + +EA+ LF M + PD I +V+ LSAC++LG
Sbjct: 343 RLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLG 402
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
L+ G +H Y++ + + ++ L T LVD YAKCG I AI++FE +N TW A++
Sbjct: 403 ALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIIC 462
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GLA+HG ++ YFS MI + PD +T +G L C H GLVD+ R F +M S YG+S
Sbjct: 463 GLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGIS 522
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+LKHY C+ DLLGRAG +EEA E+I+ MP D VW L G RIHGNV + E AA
Sbjct: 523 PKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASK 582
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++L P DGG+Y +LA++Y +A+ WE K+R+ ++ ++K GCS I++NG
Sbjct: 583 LLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNG 635
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 212/459 (46%), Gaps = 76/459 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C ++ ++ +IHA ++ GL+ S L+ ++ F IS + L Y
Sbjct: 59 SLLEACTSMAKMKEIHAQMISTGLI--SDGFALSRLV----AFCAISEWRN-----LDYC 107
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQ 123
I NN + FS+N IR + +P+NAV+L+ M R S PD Y++P L + C+
Sbjct: 108 DKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAG 167
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A I V++LGF D+FV N+++HV L A++LFDE RD+VS N++
Sbjct: 168 FSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSI 227
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+GYV+ G +EA L+ M +L++ PD
Sbjct: 228 INGYVRCG-------------------------------LADEAFDLYYKMGELNVMPDE 256
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++ +SA A+L L G+ +H+ IE + + L+ L+D Y KC I A +FE+
Sbjct: 257 VTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFEN 316
Query: 304 SQEKNLFTWNAMLVGLAMHGL-------------------------------GRLSLVYF 332
+K + +W M++G A GL + +L F
Sbjct: 317 MTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALF 376
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
M + + PD +T++ L CS G +D + ++ + ++ + + D+ +
Sbjct: 377 HEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAK 435
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G I++A+++ ++MP G + W+ ++ G +HG A
Sbjct: 436 CGNIKKAIQVFEEMP-GRNSLTWTAIICGLALHGQPHAA 473
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 141/321 (43%), Gaps = 37/321 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A+ +FN +P +N +I A+ LF +M+ S+ PD + L A
Sbjct: 338 LESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSA 397
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CSQL + L +G MH Y H L +V
Sbjct: 398 CSQLGA-----------LDVGI---------WMHHYVDKHNLT-----------MNVALG 426
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D Y K G++ A Q+F+ MP R++++W ++ G A Q AI F M+ + +
Sbjct: 427 TALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAI 298
PD I + LSAC G ++QG++ + Y ++ + L + LVD + G++ A
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRD-YFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAE 545
Query: 299 EIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
E+ S E + W A+ G +HG + S+++E G+ +L A + A
Sbjct: 546 ELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANM-YGDA 604
Query: 358 GLVDEARKLFDEMESVYGVSK 378
+ ++ARK+ ME GV K
Sbjct: 605 NMWEQARKVRKMMEE-RGVEK 624
>gi|224141025|ref|XP_002323875.1| predicted protein [Populus trichocarpa]
gi|222866877|gb|EEF04008.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/448 (39%), Positives = 269/448 (60%), Gaps = 20/448 (4%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C ++ ++ QIHAH L GL H + IL + F +A SP+ D L+YA +F+
Sbjct: 5 CNSMSRLKQIHAHSLLAGL------HDHSIILAKMLRF----AAVSPSGD-LAYAQRLFD 53
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL---CS 126
+P+P+TF YNT+IR + S P ++ L +QMR + PD ++F FL++A S++ +
Sbjct: 54 QLPHPNTFFYNTLIRGYAKSSIPSYSLHLVNQMRQNGVDPDEFTFNFLIKARSRVRVNIN 113
Query: 127 HSLA-----QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+L IH VLKLGF +FV N+L+H+Y A +FDE + DVVS +
Sbjct: 114 RNLPLVVECDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPVVAWRVFDETVGVDVVSWS 173
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
L+ +V+AG+L AR +FD+MP RD VSW T+V+ Y+Q+ EA++L+ M+D ++P
Sbjct: 174 GLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLDKGVRP 233
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D + LVS +SAC LG+L+ G ++H YI+ N R L L+D YAKCG ++ A ++F
Sbjct: 234 DEVTLVSVISACTNLGDLQMGYSVHSYIDENGFRWMVSLCNALIDMYAKCGCMDRAWQVF 293
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
S K+L TWN+M+ A + + FSRM + PDGVT L L +H GLVD
Sbjct: 294 NSMSRKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHVGLVD 353
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E +LF+ M+ +G+ ++HYGC+ ++LG+AG +EEA E+I MP+ + VW LL
Sbjct: 354 EGYRLFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSNDVVWGVLLAA 413
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
CR HG+V + E + +++LK DGG Y
Sbjct: 414 CRKHGDVYMGERVVKKLLELKL-DGGYY 440
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 267/473 (56%), Gaps = 13/473 (2%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTF 77
Q+H H L GL + H +Y + L A +F+ P
Sbjct: 139 QLHGHVLKHGLQYNVFVHTALVQMYLLC-------------GQLDTARGVFDVCPKADVI 185
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
++N II A+ + LF M + P + +L ACS+L + +HS V
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
++ + N+++ +Y + A +F + RD++S T++ G+ G++ AR
Sbjct: 246 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 305
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
FD+MP +D VSW ++ GY +S++ +EA++LF NM ++KPD +VS L+ACA LG
Sbjct: 306 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 365
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
LE G+ I YI+ N+I+ D F+ L+D Y KCG ++ A IF +++ FTW AM+V
Sbjct: 366 ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIV 425
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GLA++G G +L FS M++A I PD +T +G L C+H GLVD+ RK F M S +G+
Sbjct: 426 GLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 485
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+ HYGC+ DLL RAG ++EA E+I+ MP+ + VW LL GCR++ ++AE +
Sbjct: 486 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 545
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++L+P++G VY +L ++YA RW D+ ++R+ + IKK GCSLI++NG
Sbjct: 546 ILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNG 598
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 204/463 (44%), Gaps = 81/463 (17%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + ++ C+++ Q+ Q+H + KGL + + + TF +
Sbjct: 21 LISLLETCESMDQLQQVHCQAIKKGL------NANPVLQNRVMTF-----CCTHEYGDFQ 69
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA +F+ IP P+ F +NT+IR ++ P V L+ +M + PD Y+FPFL + +
Sbjct: 70 YARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 129
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + + +H VLK G +VFV +L+ +Y + +L A+ +FD DV++ N
Sbjct: 130 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 189
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I Y K G EE+ +LF M D + P
Sbjct: 190 IISAYNKVGKF-------------------------------EESRRLFLVMEDKQVLPT 218
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ LV LSAC++L +L GK +H Y++ ++ + L ++D YA CG +++A+ IF
Sbjct: 219 TVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 278
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE------------------------- 337
S +++ +W ++ G G ++ YF +M E
Sbjct: 279 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALEL 338
Query: 338 ------ARIKPDGVTILGALVGCSHAG---LVDEARKLFDEMESVYGVSKELKHYGCMAD 388
+KPD T++ L C+H G L + R D + + +L + D
Sbjct: 339 FRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK----IKNDLFVRNALID 394
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + G +++A + ++M D F W+ ++ G ++G+ E A
Sbjct: 395 MYFKCGDVDKAESIFREMSQ-RDKFTWTAMIVGLAVNGHGEKA 436
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 162/375 (43%), Gaps = 37/375 (9%)
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
S P + LL C S Q +H Q +K G + + N +M +C H
Sbjct: 13 SFSPPTHPLISLLETCE---SMDQLQQVHCQAIKKGLNANPVLQNRVM-TFCCTH----- 63
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE 225
+ GD +AR+LFD +P + W T++ GY++ D +
Sbjct: 64 -----------------------EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQ 100
Query: 226 EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
+ L+ M+ +KPD R LE G+ +H ++ + ++ + F+ T LV
Sbjct: 101 LGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALV 160
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
Y CG ++TA +F+ + ++ TWN ++ G S F M + ++ P V
Sbjct: 161 QMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTV 220
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T++ L CS + +K+ +++ V L M D+ G ++ AL + +
Sbjct: 221 TLVLVLSACSKLKDLRTGKKVHSYVKNC-KVESNLVLENAMIDMYADCGEMDSALGIFRS 279
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
M D+ W+ ++ G G +++A + K+ +D + + D Y ++R+++
Sbjct: 280 MN-NRDIISWTTIVSGFTNLGEIDVAR---NYFDKMPEKDYVSWTAMIDGYIRSNRFKEA 335
Query: 466 VKIRRSLDAGKIKKN 480
+++ R++ A +K +
Sbjct: 336 LELFRNMQATNVKPD 350
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/482 (38%), Positives = 272/482 (56%), Gaps = 34/482 (7%)
Query: 43 AITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM 102
+T K IS + L YA +F+ IP P+ F YN++IR ++ P++AV+LF +M
Sbjct: 20 TLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRM 79
Query: 103 RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV---F 159
+ P+ ++ PF+L+AC ++ A +H +KLG VFV N+L+ VY V
Sbjct: 80 ICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLI 139
Query: 160 H-------------------------------RLRDAQELFDEILYRDVVSCNTLIDGYV 188
H L AQ +FD ++VVS ++I Y
Sbjct: 140 HCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYA 199
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+ G + ARQ+FD+MP ++ VSW ++++ Y + Q EA+ LF M + + PD LVS
Sbjct: 200 QHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVS 259
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L+AC++LG+L GK IH YI N+ L L+D YAKCG + TA++IF KN
Sbjct: 260 ILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKN 319
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
L +WN ++ LA+HG G ++ F M PD +T+ G L CSH+GLVD FD
Sbjct: 320 LVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFD 379
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M +Y V +E++HY CM DLLGR GL+ EA+E+I +MPM DV VW LLG CRIHGNV
Sbjct: 380 RMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNV 439
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
EI + + +++L+P GG+Y +++++Y A RWEDV KIR+ + IKK S I++
Sbjct: 440 EIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEI 499
Query: 489 NG 490
+G
Sbjct: 500 DG 501
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 267/473 (56%), Gaps = 13/473 (2%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTF 77
Q+H H L GL + H +Y + L A +F+ P
Sbjct: 160 QLHGHVLKHGLQYNVFVHTALVQMYLLC-------------GQLDTARGVFDVCPKADVI 206
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
++N II A+ + LF M + P + +L ACS+L + +HS V
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
++ + N+++ +Y + A +F + RD++S T++ G+ G++ AR
Sbjct: 267 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 326
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
FD+MP +D VSW ++ GY +S++ +EA++LF NM ++KPD +VS L+ACA LG
Sbjct: 327 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 386
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
LE G+ I YI+ N+I+ D F+ L+D Y KCG ++ A IF +++ FTW AM+V
Sbjct: 387 ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIV 446
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GLA++G G +L FS M++A I PD +T +G L C+H GLVD+ RK F M S +G+
Sbjct: 447 GLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 506
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+ HYGC+ DLL RAG ++EA E+I+ MP+ + VW LL GCR++ ++AE +
Sbjct: 507 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 566
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++L+P++G VY +L ++YA RW D+ ++R+ + IKK GCSLI++NG
Sbjct: 567 ILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNG 619
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 204/463 (44%), Gaps = 81/463 (17%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + ++ C+++ Q+ Q+H + KGL + + + TF +
Sbjct: 42 LISLLETCESMDQLQQVHCQAIKKGL------NANPVLQNRVMTF-----CCTHEYGDFQ 90
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA +F+ IP P+ F +NT+IR ++ P V L+ +M + PD Y+FPFL + +
Sbjct: 91 YARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 150
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + + +H VLK G +VFV +L+ +Y + +L A+ +FD DV++ N
Sbjct: 151 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 210
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I Y K G EE+ +LF M D + P
Sbjct: 211 IISAYNKVGKF-------------------------------EESRRLFLVMEDKQVLPT 239
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ LV LSAC++L +L GK +H Y++ ++ + L ++D YA CG +++A+ IF
Sbjct: 240 TVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 299
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE------------------------- 337
S +++ +W ++ G G ++ YF +M E
Sbjct: 300 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALEL 359
Query: 338 ------ARIKPDGVTILGALVGCSHAG---LVDEARKLFDEMESVYGVSKELKHYGCMAD 388
+KPD T++ L C+H G L + R D + + +L + D
Sbjct: 360 FRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK----IKNDLFVRNALID 415
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + G +++A + ++M D F W+ ++ G ++G+ E A
Sbjct: 416 MYFKCGDVDKAESIFREMSQ-RDKFTWTAMIVGLAVNGHGEKA 457
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 162/375 (43%), Gaps = 37/375 (9%)
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
S P + LL C S Q +H Q +K G + + N +M +C H
Sbjct: 34 SFSPPTHPLISLLETCE---SMDQLQQVHCQAIKKGLNANPVLQNRVM-TFCCTH----- 84
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE 225
+ GD +AR+LFD +P + W T++ GY++ D +
Sbjct: 85 -----------------------EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQ 121
Query: 226 EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
+ L+ M+ +KPD R LE G+ +H ++ + ++ + F+ T LV
Sbjct: 122 LGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALV 181
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
Y CG ++TA +F+ + ++ TWN ++ G S F M + ++ P V
Sbjct: 182 QMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTV 241
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T++ L CS + +K+ +++ V L M D+ G ++ AL + +
Sbjct: 242 TLVLVLSACSKLKDLRTGKKVHSYVKNC-KVESNLVLENAMIDMYADCGEMDSALGIFRS 300
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
M D+ W+ ++ G G +++A + K+ +D + + D Y ++R+++
Sbjct: 301 MN-NRDIISWTTIVSGFTNLGEIDVAR---NYFDKMPEKDYVSWTAMIDGYIRSNRFKEA 356
Query: 466 VKIRRSLDAGKIKKN 480
+++ R++ A +K +
Sbjct: 357 LELFRNMQATNVKPD 371
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 289/548 (52%), Gaps = 76/548 (13%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ CKT KQ+HQI A + G + +T L I T ++YA
Sbjct: 43 SLLQSCKTSKQVHQIQAQIIANGFQY---NEYITPKLVTICA----------TLKRMTYA 89
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ IP P+ +N++ R + S V LF QM+ + I P+ ++FP +L++C ++
Sbjct: 90 RQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKI 149
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC--------------VFHR--------- 161
+ + +H ++K GF + FV +L+ +Y +F R
Sbjct: 150 NALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMI 209
Query: 162 --------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
L A+ LFD RDVV N ++ GY++ GD+ AR+LF MP RD + W T
Sbjct: 210 NGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNT 269
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDL--------------------------------DIKP 241
++ GYA + E LF M + D+ P
Sbjct: 270 VLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPP 329
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
++ LV+ LSACARLG L+ GK +H Y E + ++ + ++ L+D YAKCG I AI +F
Sbjct: 330 NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVF 389
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
K+L +WN ++ GLAMH G +L F +M A KPDG+T +G L C+H GLV+
Sbjct: 390 RGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVE 449
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ F M Y + +++HYGCM D+L RAG +E+A+ ++KMP+ D +W+GLLG
Sbjct: 450 DGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGA 509
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRI+ NVE+AE A + +++L+P++ Y +L+++Y +A RWEDV +++ ++ KK
Sbjct: 510 CRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLP 569
Query: 482 GCSLIQLN 489
GCSLI++N
Sbjct: 570 GCSLIEVN 577
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 265/442 (59%), Gaps = 9/442 (2%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM----RTVS-----IP 108
+ + YA +F + P+ + YN +IRA T S + + QM R I
Sbjct: 33 NEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLIL 92
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD ++FPF+++AC++L H+L + +H+Q K G + N+L+ +Y L DA L
Sbjct: 93 PDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNL 152
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
FDE+ R +S N +I G+V+ G + AR LFD MP R VSW +++GY + +A+
Sbjct: 153 FDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDAL 212
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
+F M I+PD +++S L ACA+LG LE GK IH + N + + + L++ Y
Sbjct: 213 DVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMY 272
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
KCG I+ A ++F+ + +++ +W+ M+ GLA HG R ++ F RM + IKP+G+T +
Sbjct: 273 TKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFV 332
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L C+HAG +E FD M+ + + E++HYG + DLLGRAG + +AL++++KMPM
Sbjct: 333 GLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPM 392
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D +W LL CR H N+E+A A EH+ +L+P+D G Y +L+++YA+ +W+DV ++
Sbjct: 393 KPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRM 452
Query: 469 RRSLDAGKIKKNAGCSLIQLNG 490
R+ + + ++KK GCSLI++N
Sbjct: 453 RKLVRSKRMKKTPGCSLIEVNN 474
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/428 (39%), Positives = 253/428 (59%), Gaps = 9/428 (2%)
Query: 72 PYPSTFSYNTIIRAHTLF----SSPLNA-VVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
P +F +NT+IRAH + P ++ + +F +MR + PDF++FPFLL++ +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L +++H+Q+L+ G D FV SL+ +Y L A+++FDEI D+ S N++I+
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINA 139
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL---DIKPDN 243
+AG + AR LF MP R+ +SW ++ GY + Q +EA+ LF M L D++P+
Sbjct: 140 NFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 199
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ L+AC RLG LE GK H YI+ + VD L T L+D YAKCG + A +F +
Sbjct: 200 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 259
Query: 304 -SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K++ W+AM+ GLAMHGL + FS+MI ++P+ VT L C H GLV E
Sbjct: 260 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 319
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ M Y + ++HYGCM DL GRAG I+EA ++K MPM DV VW LL G
Sbjct: 320 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGS 379
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R+HG++E E A + +++L+P + G Y +L++VYA RWEDV +R ++ IKK G
Sbjct: 380 RMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPG 439
Query: 483 CSLIQLNG 490
CSLI++ G
Sbjct: 440 CSLIEVGG 447
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 192/530 (36%), Positives = 290/530 (54%), Gaps = 58/530 (10%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
++C +++ + +HA + GL + +T K IS + L YA +
Sbjct: 122 EKCSSMRGLKLLHAQIILHGLTNET-----------LTLGKLISFCAVDDAGDLQYAQRM 170
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F+ IP P+ F YN++IR ++ P++AV+LF +M + P+ ++ PF+L+AC ++
Sbjct: 171 FDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAY 230
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI--- 184
A +H +KLG VFV N+L+ VY V + A++LFD+I + +VS N++I
Sbjct: 231 WEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEIT 290
Query: 185 -------------DGYVKAGDLAH-------------------------------ARQLF 200
D Y K G+L ARQ+F
Sbjct: 291 GVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIF 350
Query: 201 DRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELE 260
D+MP ++ VSW ++++ Y + Q EA+ LF M + + PD LVS L+AC++LG+L
Sbjct: 351 DQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLV 410
Query: 261 QGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLA 320
GK IH YI N+ L L+D YAKCG + TA++IF KNL +WN ++ LA
Sbjct: 411 MGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALA 470
Query: 321 MHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKEL 380
+HG G ++ F M PD +T+ G L CSH+GLVD FD M +Y V +E+
Sbjct: 471 LHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREI 530
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK 440
+HY CM DLLGR GL+ EA+E+I +MPM DV VW LLG CRIHGNVEI + + +++
Sbjct: 531 EHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLE 590
Query: 441 LKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
L+P GG+Y +++++Y A RWEDV KIR+ + IKK S I+++G
Sbjct: 591 LEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDG 640
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 265/430 (61%), Gaps = 7/430 (1%)
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT-VSIPPDFYSFPFLLRACSQL 124
+F +P S+N +I + +AV +F +M+ S+ P+ + L AC L
Sbjct: 188 QVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIAL 247
Query: 125 CSHSLAQTIHSQVL-KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + IH V +LGF + + N+L+ +YC L A+E+F+++ + V+ ++
Sbjct: 248 KMLELGKEIHRYVREQLGFT--IKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSM 305
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GYV G L AR+LF+R P RD V W ++ GY Q ++ ++A+ LF M + PD
Sbjct: 306 VSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDR 365
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LV+ L+ CA+LG LEQGK IH YI+ N+I +D+ + T L++ YAKCG+I ++EIF
Sbjct: 366 FTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNG 425
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+EK+ +W +++ GLAM+G +L F+ M++ +KPD +T +G L CSH GLV+E
Sbjct: 426 LKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEG 485
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP-MGGDVFV--WSGLLG 420
RK F M +VY + +L+HYGC+ DLLGRAG ++EA E+I+K P + +V V + LL
Sbjct: 486 RKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLS 545
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR HGNVE+ E A+ ++ ++ D V+ +LA++YA+ADRWEDV K+RR + +KK
Sbjct: 546 ACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKV 605
Query: 481 AGCSLIQLNG 490
GCS +++NG
Sbjct: 606 PGCSSVEVNG 615
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 210/480 (43%), Gaps = 91/480 (18%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+K CK+++ + QI L G F L + T P+ L YA
Sbjct: 38 LLKNCKSMQHLKQIQTQILRTG--FHQSGDTLNKFMVCCT---------DPSIGNLHYAE 86
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
IFN I P F YN +I+A T S AV+LF Q+R + PD +++PF+ +A L
Sbjct: 87 RIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLG 146
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ ++ V+K G D +V NSLM +Y R+++ +++F+E+ RDVVS N LI
Sbjct: 147 EVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLIS 206
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GYVK A +F RM + + ++P+
Sbjct: 207 GYVKCRRYEDAVDVFRRMQQQSS------------------------------LRPNEAT 236
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI----- 300
+VS LSAC L LE GK IHRY+ Q+ + LVD Y KCG+++ A EI
Sbjct: 237 VVSTLSACIALKMLELGKEIHRYVR-EQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMP 295
Query: 301 --------------------------FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
FE S +++ W AM+ G ++ F
Sbjct: 296 IKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFRE 355
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKL---FDE----MESVYGVSKELKHYGCMA 387
M R+ PD T++ L GC+ G +++ + + DE +++V G + +
Sbjct: 356 MQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTA--------LI 407
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA-EAAAEHVMK-LKPED 445
++ + G IE++LE+ + D W+ ++ G ++G A E AE V +KP+D
Sbjct: 408 EMYAKCGFIEKSLEIFNGLK-EKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDD 466
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 288/550 (52%), Gaps = 76/550 (13%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L ++ CKT KQ+HQI A + G + +T L I T ++
Sbjct: 104 LRENMRSCKTSKQVHQIQAQIIANGFQY---NEYITPKLVTICA----------TLKRMT 150
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA +F+ IP P+ +N++ R + S V LF QM+ + I P+ ++FP +L++C
Sbjct: 151 YARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCG 210
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC--------------VFHR------- 161
++ + + +H ++K GF + FV +L+ +Y +F R
Sbjct: 211 KINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTS 270
Query: 162 ----------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSW 211
L A+ LFD RDVV N ++ GY++ GD+ AR+LF MP RD + W
Sbjct: 271 MINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFW 330
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDL--------------------------------DI 239
T++ GYA + E LF M + D+
Sbjct: 331 NTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 390
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P++ LV+ LSACARLG L+ GK +H Y E + ++ + ++ L+D YAKCG I AI
Sbjct: 391 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 450
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F K+L +WN ++ GLAMH G +L F +M A KPDG+T +G L C+H GL
Sbjct: 451 VFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGL 510
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V++ F M Y + +++HYGCM D+L RAG +E+A ++KMP+ D +W+GLL
Sbjct: 511 VEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLL 570
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CRI+ NVE+AE A + +++L+P++ Y +L+++Y +A RWEDV +++ ++ KK
Sbjct: 571 GACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKK 630
Query: 480 NAGCSLIQLN 489
GCSLI++N
Sbjct: 631 LPGCSLIEVN 640
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 281/481 (58%), Gaps = 13/481 (2%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
T K+I QIHA G L H++ + A+ A S T L YA I +
Sbjct: 26 TFKEIRQIHAKLYVDGTL--KDDHLVGQFVKAV--------ALSDHT-YLDYANQILDRS 74
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS--IPPDFYSFPFLLRACSQLCSHSL 129
P+ F+ N++IRAH P + +S++ + + PD Y+ FL++AC+ L
Sbjct: 75 DKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRET 134
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+H ++ GF D V L+ +Y L ++F+ + Y D V ++ +
Sbjct: 135 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACAR 194
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD+A AR+LF+ MP +D ++W +++GYAQ + EA+ LF M +K + ++++S
Sbjct: 195 CGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISV 254
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSAC +LG L+QG+ H YIE N+I++ L T LVD YAKCG ++ A+E+F +EKN+
Sbjct: 255 LSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNV 314
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+TW++ L GLAM+G G L FS M + + P+ VT + L GCS G VDE +K FD
Sbjct: 315 YTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDS 374
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M + +G+ +L HYGC+ DL RAG +E+A+ +I++MPM VWS LL R++ N+E
Sbjct: 375 MRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLE 434
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ A++ +++L+ + G Y +L+++YA++D W++V +R+S+ + ++K GCS++++N
Sbjct: 435 LGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 494
Query: 490 G 490
G
Sbjct: 495 G 495
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 196/392 (50%), Gaps = 32/392 (8%)
Query: 97 VLFSQMRT-VSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHV 155
VL MR+ V P+ +F ++ AC + IH V+K G + +V V+N+LM++
Sbjct: 622 VLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNL 681
Query: 156 YCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLV 215
Y K GDL + +LF+ + ++ VSW T++
Sbjct: 682 YG-------------------------------KTGDLISSCKLFEDLSVKNLVSWNTMI 710
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
+ Q+ EE + F + +KPD ++ L C +G + + IH I
Sbjct: 711 VIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFN 770
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
++ ++T L+D YAK G + + +F + W AML A HG GR ++ +F M
Sbjct: 771 ANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELM 830
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
+ + PD VT L CSH+GLV+E R F+ M Y + L HY CM DL+GR+GL
Sbjct: 831 VHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGL 890
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+++A +IK+MPM VW LLG CR++ + ++ AA+ + +L+P DG Y +L+++
Sbjct: 891 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNI 950
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
Y+ + W+D +IR + + + +G S I+
Sbjct: 951 YSASGLWKDASRIRNLMKQKGLVRASGYSYIE 982
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 38 TTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVV 97
+ +L + + + T D +S + +F ++ + S+NT+I H +
Sbjct: 666 SGVLEEVKVVNALMNLYGKTGDLIS-SCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLA 724
Query: 98 LFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC 157
F+ R V + PD +F +LR C + L+Q IH ++ GF + + +L+ +Y
Sbjct: 725 YFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYA 784
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
RL D+ +F EI D+++W ++A
Sbjct: 785 KLGRLEDSSTVFLEI-------------------------------TSPDSMAWTAMLAA 813
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL--NQIR 275
YA +AI+ F M+ + PD++ L+AC+ G +E+G+ Y E + R
Sbjct: 814 YATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGR---YYFETMSKRYR 870
Query: 276 VDSFLS--TGLVDFYAKCGYINTAIE-IFESSQEKNLFTWNAML 316
++ L + +VD + G + A I E E + W A+L
Sbjct: 871 IEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALL 914
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 286/496 (57%), Gaps = 22/496 (4%)
Query: 1 MTLNNFIKRCKTIKQI---HQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSAS 54
+TL K C + I +IH H L G LF+S I +YA+
Sbjct: 117 LTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIH---MYAMC--------- 164
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
L +A +F+ + S+NT+I ++ ++ + LF M +I D +
Sbjct: 165 ----GQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTM 220
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
++ ACS L A ++ + + DV++ N+L+ +Y AQ +FD +
Sbjct: 221 VKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRE 280
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
R++VS N L+ G+ K G+L AR+LFD MP RD +SW +++ GY+Q+ Q +A++LF M
Sbjct: 281 RNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEM 340
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
M +KPD + + S LSACA LG+L+ G +H YI + ++ D ++ L+D Y KCG +
Sbjct: 341 MAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMV 400
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A+E+F ++K+ +W +++ GLA++G +L FS+M+ ++P T +G L+ C
Sbjct: 401 EKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLAC 460
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+HAGLV++ + F+ MESV+G+ +KHYGC+ DLL R+G I++A E IKKMP+ DV V
Sbjct: 461 AHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVV 520
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LL C++HGNV +AE A + +++L P D G Y +L++ YA DRW+D +K+R ++
Sbjct: 521 WRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMED 580
Query: 475 GKIKKNAGCSLIQLNG 490
++K +G S I+++G
Sbjct: 581 SDVQKPSGSSSIEVDG 596
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 196/416 (47%), Gaps = 80/416 (19%)
Query: 58 TDPL-------SYALS---------IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ 101
TDP SY+LS +FN I P+ +N +IR + P+ A+ ++++
Sbjct: 47 TDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTR 106
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR 161
M I + + FL +AC+++ + IH LKLGF +FV N+L+H+Y + +
Sbjct: 107 MHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQ 166
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
L AQ++FD +L RD+VS NTLI G Y+Q
Sbjct: 167 LGFAQKMFDGMLDRDLVSWNTLICG-------------------------------YSQY 195
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
++ +E ++LF M +IK D + +V + AC+ LG+ E ++ +YI+ N + +D +L
Sbjct: 196 NKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLG 255
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG-----------------L 324
L+D Y + A +F+ +E+N+ +WNA+++G A G +
Sbjct: 256 NTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVI 315
Query: 325 GRLSLV--------------YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
S++ F M+ A++KPD VT+ L C+H G +D + +
Sbjct: 316 SWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYI 375
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+GV ++ + D+ + G++E+ALE+ +M D W+ ++ G ++G
Sbjct: 376 RR-HGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK-DKDSVSWTSVISGLAVNG 429
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 277/486 (56%), Gaps = 20/486 (4%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
++K + +HA L GL ++L +L F + Y+ IF+
Sbjct: 22 SLKHLKHVHAALLRLGLD--EDSYLLNKVLRFSFNFGNTN-----------YSHRIFHQT 68
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P+ F +NT+I L S ++ ++ MR + PD ++FPFLL+AC++L L
Sbjct: 69 KEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGI 128
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+H V+K G D FV SL+ +Y + +A ++FD+I ++V + +I GY+ G
Sbjct: 129 KLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVG 188
Query: 192 DLAHARQLFDR-------MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
A +F R M +D VSW +++ GYA + +EA+ LF M++ +PD
Sbjct: 189 KCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCY 248
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
A+V L ACARLG LE G ++ N+ + L T L+D YAKCG +++A E+F
Sbjct: 249 AMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGM 308
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++K++ WNA + GLAM G + + F +M ++ I+PDG T +G L C+HAGLVDE R
Sbjct: 309 RKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGR 368
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F+ ME V+ ++ E++HYGCM DLLGRAG ++EA +++K MPM + VW LLGGCR+
Sbjct: 369 QYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRL 428
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H + ++ E + ++ L+P + G Y +L+++Y+ + +WED KIR + IKK G S
Sbjct: 429 HRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYS 488
Query: 485 LIQLNG 490
I+++G
Sbjct: 489 WIEVDG 494
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/491 (36%), Positives = 285/491 (58%), Gaps = 14/491 (2%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + + CK++ ++ +IHA T G+ TI + F SA SP D L
Sbjct: 15 TLISLLDGCKSMFELKRIHALLFTLGI------SQDETIKSKLLLF----SALSPARD-L 63
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
Y+ + N+P P+TF++NT+IRA + +P ++ +F +M + PD+ ++PFL++A
Sbjct: 64 DYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKAT 123
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S+L + L +H ++K G D F+ NSL+H+Y + A+++FDE+ +++V+ N
Sbjct: 124 SKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWN 183
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++DGY K GDL AR++F+ MP +D VSW +L+ GY + EA+ LF M
Sbjct: 184 AMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMA 243
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + LVSAL ACA LG LE G+ +HRYI N++ + L T LVD YAKCG I+ A+ +F
Sbjct: 244 NEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVF 303
Query: 302 E--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
S QE ++ WNA++ GLA HGL + ++ F M I PD +T L L C+H GL
Sbjct: 304 RACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGL 363
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+EA FD + +G+ +++HY CM D L RAG + EA + + +MP+ + LL
Sbjct: 364 VEEAWYFFDCLRK-HGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALL 422
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
GC HG ++IA+ +++L P G Y L+++YA RW+D IR +++ +KK
Sbjct: 423 SGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKK 482
Query: 480 NAGCSLIQLNG 490
+ G S I++ G
Sbjct: 483 SPGFSFIEVYG 493
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/495 (36%), Positives = 278/495 (56%), Gaps = 31/495 (6%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGL--------LFLSPCHILTTILYAITTFKPISSASSPT 57
+ C +K +HQ HA L + L LF+ L LYA + F +
Sbjct: 17 LLNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSL------- 69
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
T P P+ F YNTIIRA +L P ++ LF+++++ + PD YSFPF
Sbjct: 70 THP-------------PNIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFA 116
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI--LYR 175
L+A +L + HSQ ++ G + VL SL+ +Y H + DA++LFD I R
Sbjct: 117 LKAVIRLSATKTGLQFHSQAIRFGLHSHLHVLVSLIRMYSSSH-ISDARKLFDGIPLTAR 175
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
+V N ++ Y K D+ +A+ LFD MP R+ +SW L++GYA ++ +AI +F M
Sbjct: 176 NVALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQ 235
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
++ PD I L++ LSACA+LG LE G+ I YI+++ + + L L+D YAK G I
Sbjct: 236 LQNVVPDEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIK 295
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+ IFES + K + TW M+ GLA+HGLG +L FSRM R+KP+ +T + L CS
Sbjct: 296 RALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACS 355
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GLV AR F M S Y + +++HYGCM DLLGRAG ++EA +++++MP + +W
Sbjct: 356 HVGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIW 415
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL HG+ + E +H+++L+P + G Y +L+++YA+ RW+ +R+ +
Sbjct: 416 GSLLAASYTHGDAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDR 475
Query: 476 KIKKNAGCSLIQLNG 490
+KK G S I++N
Sbjct: 476 GVKKIPGGSFIEVNN 490
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 274/478 (57%), Gaps = 42/478 (8%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C ++ Q+ QIHA + + + YA + +S + + LSYAL +F
Sbjct: 35 KCTSMHQLKQIHAQMIVSARIHDN---------YAASRL--LSFCALSESGDLSYALRLF 83
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
NN P++F +NT+IRAH +P A++L+ MR + + P ++FPFLL+ACS S
Sbjct: 84 NNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQ 143
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H+ VLK G ++ V+N L+ Y V SC
Sbjct: 144 SCIQVHTHVLKFGLDLNLHVVNGLVRAYSV--------------------SC-------- 175
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
D+ +AR++FD + R W T+++GYAQ+ EA++LF M+ ++P+ L S
Sbjct: 176 ---DVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLAS 232
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LSACA+ G L+ G+ IH ++E I V L T LV YAK G I A ++F++ E+N
Sbjct: 233 VLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTISERN 292
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
TWNAM+ GLA+HG + +L F ++ + +I P+ +T +G L C HAGL+ RK+F
Sbjct: 293 TATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFH 352
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M+ VYG+ +++HYGCM DLLGR G + EA E+IK M DV + LLG C+ HGN+
Sbjct: 353 LMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNI 412
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
EIAE + ++ L+P + GVY VL+++YA A RWEDV+++R+ + +G +KK G SL+
Sbjct: 413 EIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLV 470
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/485 (35%), Positives = 281/485 (57%), Gaps = 4/485 (0%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C + + IH L L+ S + + +L A+ S+ PT + L YA
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLI--SDVFVASRLL-ALALCVDDSTFHKPT-NLLGYAY 73
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
IF+ I P+ F +N +IR + + P A ++QM I PD +FPFL++A +++
Sbjct: 74 GIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEME 133
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + HSQ+++ GF DV+V NSL+H+Y + A +F ++ +RDVVS +++
Sbjct: 134 CVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVA 193
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY K G + AR++FD MP R+ +W ++ GYA+++ E+AI LF M + +
Sbjct: 194 GYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETV 253
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+VS +S+CA LG LE G+ H Y+ + + V+ L T LVD Y +CG I AI +FE
Sbjct: 254 MVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELP 313
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+K+ +W++++ GLA+HG ++ YFS+M+ P +T+ L CSH GLVD+ +
Sbjct: 314 DKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLE 373
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+++ M+ YG+ L+HYGC+ D+LGRAG + EA I KMP+ + + LLG C+I+
Sbjct: 374 IYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIY 433
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N E+AE ++++KPE G Y +L+++YA A +WE + +R + +KK G SL
Sbjct: 434 KNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSL 493
Query: 486 IQLNG 490
I+++G
Sbjct: 494 IEIDG 498
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 281/488 (57%), Gaps = 18/488 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K C I ++ +IHAH + LS L T + + YA
Sbjct: 21 LKDCPNIVELKKIHAHIVK---FSLSQSSFLVTKMVDVCNH----------YGETEYANL 67
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-----RTVSIPPDFYSFPFLLRAC 121
+F + P+ F YN +IRA+ + A+ ++ QM I PD ++FPF++++C
Sbjct: 68 LFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSC 127
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L + L + +H V K G + V NSL+ +Y L DA +F+E+ RD VS N
Sbjct: 128 AGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWN 187
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
TLI G+V+ G + AR +F+ M + SW +V+GYA+ +A++ F M + I+P
Sbjct: 188 TLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEP 247
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D I+LVS L CA+LG LE GK IH Y + + + L++ YAKCG I+ +F
Sbjct: 248 DEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLF 307
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ +E+++ +W+ M+VGLA HG R ++ F M +A+I+P +T +G L C+HAGL++
Sbjct: 308 DQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLN 367
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E + F+ M+ Y + ++HYGC+ +LLG +G +++ALE++KKMP D +W LL
Sbjct: 368 EGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSS 427
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR HGN++IA A EH+++L+P D G Y +L+++YA+ +W+ V ++R+ + + +KK
Sbjct: 428 CRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTP 487
Query: 482 GCSLIQLN 489
GCS I+++
Sbjct: 488 GCSSIEVD 495
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 257/433 (59%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
++ + A +F+ + S S+ T++ + ++ LF QMR ++ PD + +
Sbjct: 315 SNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTV 374
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L AC L L +++H+ ++ G + D F+ N+L+ +Y +L +A F+++ +
Sbjct: 375 LSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSA 434
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
S N+++DG+ ++G + AR F+++P +D VSW T+V Y + D E+ ++FC M
Sbjct: 435 ASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSS 494
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++KPD L+S LS+CA++G L G ++ YIE N+I +D+ L T L+D Y KCG + A
Sbjct: 495 NVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMA 554
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
EIF EKN+F W AM+ AM G ++ + M E +KPD VT + L CSH
Sbjct: 555 YEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHG 614
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLVDE K F+++ S Y + + HYGCM DLLGR G +EE ++ I++MP+ DV +WS
Sbjct: 615 GLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSS 674
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
L+ CR H NVE+AE A + ++++ P + G + +L+++YA+A RW+DV K+R L +
Sbjct: 675 LMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGV 734
Query: 478 KKNAGCSLIQLNG 490
K G ++I+ NG
Sbjct: 735 PKQPGFTMIEQNG 747
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 187/401 (46%), Gaps = 39/401 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +F + + S+NT+I + L A+ LF +M + PD + L+
Sbjct: 184 LKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVST 243
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR--DVV 178
C++L + + +H ++ +LN L+ +Y ++ +A L DVV
Sbjct: 244 CAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVV 303
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
TL+ GYVK+ + ARQLFD+M R VSW T+++GY Q E+++LF M +
Sbjct: 304 LWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFEN 363
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ PD +ALV+ LSAC L + + G+++H +I + VD FL L+D YAKCG ++ A+
Sbjct: 364 VIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEAL 423
Query: 299 EIFES-------------------------------SQEKNLFTWNAMLVGLAMHGLGRL 327
FE EK++ +WN M+ H L
Sbjct: 424 RTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNE 483
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA--RKLFDEMESVYGVSKELKHYGC 385
S F +M + +KPD T++ L C+ G ++ ++ E + G+ L
Sbjct: 484 SFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEI-GIDAMLG--TA 540
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ D+ G+ G +E A E+ ++ + +VFVW+ ++ + G
Sbjct: 541 LIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAAYAMEG 580
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 217/510 (42%), Gaps = 84/510 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +K C I++ IHAH +T L+ P I + +L + + + A LSY+
Sbjct: 40 DLLKSCSNIREFSPIHAHLITANLIH-DP-EITSQVLAFLLSVNNLDCAHQI----LSYS 93
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
P + +NT++ P + + M T + D +F FL+ AC +
Sbjct: 94 HE-------PESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKN 146
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
L +H ++LK GF + + N+LM +Y +L++ +LF+++ +RDV+S NT+I
Sbjct: 147 FDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMI 206
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
YV G A LFD M LV+G + PD I
Sbjct: 207 SCYVLKGMYREALDLFDEM----------LVSG---------------------VLPDEI 235
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG------------ 292
+VS +S CA+L +LE GK +H YI N++ + L LVD Y+KCG
Sbjct: 236 TMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRC 295
Query: 293 ---------------------YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
I+ A ++F+ E++L +W M+ G G SL
Sbjct: 296 DESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLEL 355
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F +M + PD V ++ L C H D R + + + YG+ + + DL
Sbjct: 356 FQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVT-YGMLVDGFLGNALLDLYA 414
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGG-CRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
+ G ++EAL +++P W+ +L G CR G + A + K+ +D +
Sbjct: 415 KCGKLDEALRTFEQLPCKSAA-SWNSMLDGFCRSGG----VDKARDFFNKIPEKDIVSWN 469
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKN 480
+ + Y D + + +I + + +K +
Sbjct: 470 TMVNAYVKHDLFNESFEIFCKMQSSNVKPD 499
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 289/521 (55%), Gaps = 45/521 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ CK K + Q+H + L+ + +L + +F + S L+YA
Sbjct: 36 SLLQNCKNPKDLIQLHTLLIKTSLI--KEKYAFGRLLLSFASFDNLGS--------LNYA 85
Query: 65 LSIFNNIPYP-STFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLLRAC 121
+F+ + P ++F Y T+I+A+ F +P A +S+M + P+ ++F ++ AC
Sbjct: 86 QKLFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSAC 145
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR-DAQELFDEILYRDVVSC 180
S+ + H+Q++K F V NSL+ Y + + +FD+I DVVS
Sbjct: 146 SKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSW 205
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA------------- 227
N LI+GYVK+GDL AR+LFD MP RD VSW ++ GYA + EA
Sbjct: 206 NCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLV 265
Query: 228 ------------------IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
++LF M +K D + + + LSACARLG L+QG+ +H YI
Sbjct: 266 SWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYI 325
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
+ + I+VD+ LST L+D Y+KCG I+ A ++F+ + +K +F W++M+ GLAMH G ++
Sbjct: 326 DKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAI 385
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F++MIE I+P +T + L C+H+GLVD ++F+ M ++HYGC+ DL
Sbjct: 386 ELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDL 445
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
LGRAGL+ +A +++ MP+ D +W LL C++H NVE+ E ++K++P++ Y
Sbjct: 446 LGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNY 505
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ ++VYA +RW+ K+RR + ++KN GCS I+LNG
Sbjct: 506 VLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNG 546
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 274/489 (56%), Gaps = 16/489 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ CK+ +QI Q+HA +T GL IL+ I T K + SS P+SYA
Sbjct: 7 LLSSCKSFRQIKQVHARLITTGL-----------ILHPIPTNKLLKQLSS-IFAPISYAH 54
Query: 66 SIFNNIPYPSTFSYNTIIR--AHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+F++ P P F YNTII+ A + SS + S +R + P+ YSF F + C
Sbjct: 55 MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGS 114
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + +KLG ++FV N+L+ +Y + DA+++FD RD+ S N +
Sbjct: 115 GVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIM 174
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY + G + ARQLFD MP +D VSW T+++G Q EA+ +F NM+ + P+
Sbjct: 175 LSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNE 234
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
L S+L+ACA L L+QG+ +H YI+ N I+++ L GL+D YAKCG + A ++F S
Sbjct: 235 YTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNS 294
Query: 304 SQ--EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ ++ ++ WNAM+ G A+HG + ++ F +M ++ P+ VT + L CSH V+
Sbjct: 295 NPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVE 354
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E R F+ M S Y V EL+HYGC+ DLLGRAG ++EA E+I M + DV +W LL
Sbjct: 355 EGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSA 414
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C+IH + E+ E + V +L P G + +LA++Y+ W + +R + KK
Sbjct: 415 CKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTP 474
Query: 482 GCSLIQLNG 490
GCS I+LNG
Sbjct: 475 GCSSIELNG 483
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 273/478 (57%), Gaps = 42/478 (8%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C ++ Q+ QIHA + + + YA + +S + + LSYAL +F
Sbjct: 37 KCTSMHQLKQIHAQMIVSARIHDN---------YAASRL--LSFCALSESGDLSYALRLF 85
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
NN P++F +NT+IRAH +P A++L+ MR + + P ++FPFLL+ACS S
Sbjct: 86 NNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQ 145
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H+ VLK G ++ V+N L+ Y V SC
Sbjct: 146 SCIQVHTHVLKFGLDLNLHVVNGLVRAYSV--------------------SC-------- 177
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
D+ +AR++FD + R W T+++GYAQ+ EA++LF M+ ++P+ L S
Sbjct: 178 ---DVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLAS 234
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LSACA+ G L+ G+ IH ++E I V L T LV YAK G I A ++F+ E+N
Sbjct: 235 VLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXISERN 294
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
TWNAM+ GLA+HG + +L F ++ + +I P+ +T +G L C HAGL+ RK+F
Sbjct: 295 TATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFH 354
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M+ VYG+ +++HYGCM DLLGR G + EA E+IK M DV + LLG C+ HGN+
Sbjct: 355 LMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNI 414
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
EIAE + ++ L+P + GVY VL+++YA A RWEDV+++R+ + +G +KK G SL+
Sbjct: 415 EIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLV 472
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 273/475 (57%), Gaps = 14/475 (2%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
K+ + QIHAHFL GL IL + +F I+ YA +F+
Sbjct: 20 KSRTHLTQIHAHFLRHGLH--QSNQILAHFISVCASFNRIA-----------YADRLFSQ 66
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P+ F +N+II+AH+L +++LFS M+ I PD Y+F LL++C+ LC +SL
Sbjct: 67 SHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLG 126
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
Q + S+V + GF C + ++ +Y ++ DA ++FDE+ +RDVV N +I G+ K
Sbjct: 127 QCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKT 186
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G++ LF +M R VSW T+++ AQ+ + EA++LF M + KPD + +V+ L
Sbjct: 187 GNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTML 246
Query: 251 SACARLGELEQGKNIHRYIELNQIRVD-SFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
C+RLG LE G+ IH Y V + + L+DFY KCG I A IF+ K++
Sbjct: 247 PVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSV 306
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+WN +++G A++G G ++ F M + +KP+ T + L C H+GL+++ R+LF
Sbjct: 307 VSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSS 366
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M Y + +L+H+GCM DLLGR G +EEA ++IK MPM + +W +LG CR HGN++
Sbjct: 367 MAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLK 426
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+AE A + ++ L+P + G Y +L+++ A RWE+V +R+ + +KK G S
Sbjct: 427 LAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 161/415 (38%), Positives = 257/415 (61%), Gaps = 2/415 (0%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
S+N+++ P A+ LF +MR + P+ + ++ AC++ + +L + + +
Sbjct: 310 SWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYI 369
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+ + ++ V N+ + ++ + A+ LFD + RDVVS T+IDGY K + AR
Sbjct: 370 DRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIAR 429
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF--CNMMDLDIKPDNIALVSALSACAR 255
+FD MP +D +W L++GY QS + +EA+ +F + +PD + L+S LSACA+
Sbjct: 430 DIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQ 489
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
LG ++ G+ IH YI+ +I+++ L+T L+D Y+K G + AIE+F S K++F W+AM
Sbjct: 490 LGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAM 549
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
+ GLAMHG G ++ F M E ++KP+ VT L CSH+GLVDE ++LFDEME VYG
Sbjct: 550 IAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYG 609
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
V + KHY CM D+LGRAG +EEAL+ I+ MP+ VW LLG C IHGN+E+AE A
Sbjct: 610 VVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKAC 669
Query: 436 EHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++++P + G Y +L+++YA WE V ++R+ + +KK GCS I+++G
Sbjct: 670 SRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDG 724
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 218/468 (46%), Gaps = 92/468 (19%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++C + KQ+ QIHA L L P YA + ++A+ + L YA
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLH-DP--------YAASEL--FTAAAFSSFSALDYAR 193
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQL 124
+F+ IP P+ +S+N +IRA S P+ +V++F +M S P+ ++FP L++A ++
Sbjct: 194 KVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAER 253
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL--YRDVVSCNT 182
+ + +H +K F DVFVLNSL+H Y L A +F+ I +D+VS N+
Sbjct: 254 RCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNS 313
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ G+V+ G P ++A+ LF M + + P+
Sbjct: 314 MVTGFVQGG-----------YP--------------------DKALDLFERMRNEGVHPN 342
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ +VS +SACA+ L G+ + YI+ N++ ++ + +D + KCG + A +F+
Sbjct: 343 AVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFD 402
Query: 303 SSQEKNLFTWNAMLVGLAM---HGLGR------------------------------LSL 329
+ +++++ +W ++ G A HG+ R L++
Sbjct: 403 NMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAI 462
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG-VSKELKHYG---- 384
++ ++ +PD VT+L L C+ G +D E ++G + KE
Sbjct: 463 FRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG-------EWIHGYIKKERIQLNRNLA 515
Query: 385 -CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ D+ ++G +E+A+E+ + DVFVWS ++ G +HG E A
Sbjct: 516 TSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGRGEAA 562
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 277/523 (52%), Gaps = 74/523 (14%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+K CK+++ + QI L G F L + T P+ L YA
Sbjct: 38 LLKNCKSMQHLKQIQTQILRTG--FHQSGDTLNKFMVCCT---------DPSIGNLHYAE 86
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
IFN I P F YN +I+A T S AV+LF Q+R + PD +++PF+ +A L
Sbjct: 87 RIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLG 146
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ ++ V+K G D +V NSLM +Y R+++ +++F+E+ RDVVS N LI
Sbjct: 147 EVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLIS 206
Query: 186 GYVKA-----------------------------------GDLAHARQLFDRMPFRDAVS 210
GYVK G L AR+LF+R P RD V
Sbjct: 207 GYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVL 266
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W ++ GY Q ++ ++A+ LF M + PD LV+ L+
Sbjct: 267 WTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLT------------------- 307
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
D+ + T L++ YAKCG+I ++EIF +EK+ +W +++ GLAM+G +L
Sbjct: 308 ------DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALE 361
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F+ M++ +KPD +T +G L CSH GLV+E RK F M +VY + +L+HYGC+ DLL
Sbjct: 362 LFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLL 421
Query: 391 GRAGLIEEALEMIKKMP-MGGDVFV--WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGG 447
GRAG ++EA E+I+K P + +V V + LL CR HGNVE+ E A+ ++ ++ D
Sbjct: 422 GRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSS 481
Query: 448 VYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
V+ +LA++YA+ADRWEDV K+RR + +KK GCS +++NG
Sbjct: 482 VHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNG 524
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 287/490 (58%), Gaps = 15/490 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + +RC ++ + +HAH F + H T +L + F +A SP D L
Sbjct: 9 TLAHMAERCTCMRDLKLLHAH------AFRTRLHDHTVVLGKLFRF----AAVSPLGD-L 57
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA +F+ +P+P+TF YNT+IRAH ++P + + F+ MR ++ PD +SF FLL++
Sbjct: 58 RYAHRMFDQMPHPTTFFYNTLIRAHAHSTTPSLSSLSFNLMRQNNVAPDQFSFNFLLKSR 117
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR----DV 177
S+ + +H VLK GF + V N L+H Y A+ +F+++L DV
Sbjct: 118 SRTTPLTHHNDVHGAVLKFGFCRHLHVQNGLIHFYANRGMTLLARRVFEDVLQLGLEVDV 177
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VS + L+ +VKAG+L AR++FD MP RD VSW ++ GY+Q+ + EA++LF M
Sbjct: 178 VSWSGLLVAHVKAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRS 237
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ PD + +VS +SACA LG++E G +HR++E N L L+D Y KCG + A
Sbjct: 238 GVWPDEVTMVSLVSACASLGDMETGMMVHRFVEENGFGWMVALCNALIDMYGKCGCLEEA 297
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F K+L TWN M+ A +G + F M+ + + PD VT+L LV +H
Sbjct: 298 WRVFHGMTRKSLITWNTMVTVCANYGNADEAFRLFEWMVCSGVVPDSVTLLALLVAYAHK 357
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLVDE +LF+ M+ YGV ++HYG + D+LGRAG ++EA +++ +P+ + VW
Sbjct: 358 GLVDEGIRLFESMDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYDLLTNIPIPCNDAVWGA 417
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG CRIHG+VE+ E + +++LKP++GG Y +L D+Y A + + + R+++ A +
Sbjct: 418 LLGACRIHGDVEMGEKLIKKLLELKPDEGGYYILLRDIYVAAGQTVEANETRQAMLASRA 477
Query: 478 KKNAGCSLIQ 487
+KN GCS ++
Sbjct: 478 RKNPGCSWVE 487
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 276/482 (57%), Gaps = 16/482 (3%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
T+K++ QIH + GLL + +L + +I P + L Y+ I +
Sbjct: 21 TLKELKQIHTQLVINGLL--NNRELLGQFVASIAVRNPTN---------LLYSNQILDQC 69
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS--IPPDFYSFPFLLRACSQLCSHSL 129
P+ F+ N++IRA++ +P + ++++ + + PD Y+F FL+R C+Q +
Sbjct: 70 AKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSACEA- 128
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+H ++K GF D V + L+ +Y L +F+ + D+V T++ K
Sbjct: 129 GPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAK 188
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVS 248
GD+ AR LFD MP RD VSW ++AGYAQ Q EA+ LF +M +D +K + ++++S
Sbjct: 189 CGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLF-KLMQMDGVKVNEVSMIS 247
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
++AC LG L+QGK H YIE N+I++ L T LVD Y KCG ++ A+++F EKN
Sbjct: 248 VVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKN 307
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
++TW+ + GLAM+G G+ L FS M I P+ +T + L GCS G VDE R FD
Sbjct: 308 VYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFD 367
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M+ +G+ L+HYGCM DL GRAG +EEAL I MP+ W LL CR++ N+
Sbjct: 368 SMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNM 427
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
E+ E A+ +++++ ++ G Y L+++YA+ W+ V +R+S+ A I K GCS++++
Sbjct: 428 ELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEV 487
Query: 489 NG 490
NG
Sbjct: 488 NG 489
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 181/485 (37%), Positives = 277/485 (57%), Gaps = 18/485 (3%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + + Q LT+GL IL A + S S SYA S+F
Sbjct: 40 CTNLSHLQQTQGFMLTRGL-------DQDDILLARFIYTSASLGLS------SYAYSVFI 86
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ PS F YN +I A + S+P A+ LF+ +R + +PPD YSFPF+L+A L + +
Sbjct: 87 SNHRPSIFFYNNVIWALS-SSNPTRAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHV 145
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ IH Q + G V+ SL+ +Y L A++LFD ++ N ++ GY K
Sbjct: 146 GKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAK 205
Query: 190 AGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
G++++AR LF+ MP RD VSW TL++GY Q+ EAI LF M+ +++PD IA++
Sbjct: 206 VGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAIL 265
Query: 248 SALSACARLGELEQGKNIHRYIEL--NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+ LSACA LG L+ G+ IH YIE N++R L L+D YAK G I+ A ++F++ +
Sbjct: 266 AVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMK 325
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K + TW ++ GLA+HG G+ +L FS M +AR+KP+ VT++ L CSH GLV+ R
Sbjct: 326 HKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRN 385
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+F M S YG+ +++HYGCM DLLGRAG ++EA+E+++ MP + VW LL +
Sbjct: 386 IFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRY 445
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+ +A A H+ L+P + G Y +L++ YA W++ +R+ + +K G S
Sbjct: 446 GDAALAAEALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSF 505
Query: 486 IQLNG 490
++LN
Sbjct: 506 VELNN 510
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 284/499 (56%), Gaps = 28/499 (5%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K C + + + +IHA + G F +IL +L +F + SA
Sbjct: 34 LKSCVSFRNLAKIHAQIVVSG--FSQKNYILNHLLSLYISFGSLGSAQK----------- 80
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F +I PST +N II+ HT + ++ LF +M + + +++ FLL AC +
Sbjct: 81 VFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRL 140
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF-----HRLRDAQELFDEILYRDVVSCN 181
+ IH +VL G+ +++V +L+++Y L+ A+ LFDE+ +VV N
Sbjct: 141 FREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWN 200
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+L+ GYV+ GD AR++FD MP R+ +W +VAG+AQ+ QC+ A+ LF M ++
Sbjct: 201 SLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVEL 260
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELN----QIRVDSFLSTGLVDFYAKCGYINTA 297
D +ALV+ALSACA LG+L GK IH Y+E + V L+ L+ YA CG ++ A
Sbjct: 261 DQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLA 320
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI---EARIKPDGVTILGALVGC 354
++FE ++N +W++++ G A G G ++ F M+ + ++PD +T +GAL C
Sbjct: 321 YKVFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTAC 380
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
SHAGL+ + +LF M +GV +++HYGCM DLL RAGL+ EAL +I+ MPM + V
Sbjct: 381 SHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAV 440
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHV-MKLKPED--GGVYKVLADVYANADRWEDVVKIRRS 471
W LL GCR+H N EI A+H+ ++ P + G + +LA+VYA RW+D +RR+
Sbjct: 441 WGALLSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRN 500
Query: 472 LDAGKIKKNAGCSLIQLNG 490
+ +KK +G S I++NG
Sbjct: 501 MHDIGVKKPSGRSWIEING 519
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 285/550 (51%), Gaps = 83/550 (15%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+ +C I ++HA + + L L+++P K IS+ S ++
Sbjct: 30 LHKCTDFNHIKEVHAQIIKRNLHNDLYVAP--------------KLISAFS--LCHQMNL 73
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+++FN I P+ YNT+IRAH S L A F M+ + D +++PFLL+AC+
Sbjct: 74 AVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNG 133
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC------------VFHRLRD------- 164
Q IH V K GF D+FV NSL+ Y +F + +
Sbjct: 134 KGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWN 193
Query: 165 --------------AQELFDEILYRDVVSCNTLIDGYVKAG------------------- 191
A++LFDE+ RD VS NT++DGYVKAG
Sbjct: 194 SMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVS 253
Query: 192 ------------DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
D+ AR LFD+MPF++ V+W +++G+A+ +EA L+ M +
Sbjct: 254 WSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGL 313
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD+ L+S L+ACA G L GK +H I+ +I+ +S LVD YAKCG ++ A+
Sbjct: 314 KPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALS 373
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF ++L +WN ML GLAMHG G ++ FS+M + KPD VT++ L C+HAG
Sbjct: 374 IFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGF 433
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ F+ ME +G+ ++HYGCM DLLGR G +EEA +++ MPM + +W LL
Sbjct: 434 VDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLL 493
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CR+H V +AE + ++ L+ D G Y +L++++A A W V +R + + ++K
Sbjct: 494 GACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQK 553
Query: 480 NAGCSLIQLN 489
+G S I+L+
Sbjct: 554 PSGASSIELD 563
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/502 (38%), Positives = 291/502 (57%), Gaps = 27/502 (5%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I C+TI+ + QIHA F+ G + L A + +++ D L YA
Sbjct: 23 INTCRTIRDLSQIHAVFIKSGQI--------RDTLAAAEILRFCATSDLHHRD-LDYAHK 73
Query: 67 IFNNIPYPSTFSYNTIIR--AHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQ 123
IFN +P + FS+NTIIR + + L A+ LF +M + I P+ ++FP +L+AC++
Sbjct: 74 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAK 133
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF-DEILYRD------ 176
+ IH LK GF D FV+++L+ +Y + ++DA LF I+ R+
Sbjct: 134 TGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMID 193
Query: 177 -------VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
VV N +IDGY++ GD AR LFD+M R VSW T+++GY+Q+ ++A++
Sbjct: 194 RRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVE 253
Query: 230 LFCNMMD-LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
+F M DI+P+ + LVS L A +RLG LE G+ +H Y E + IR+D L + L+D Y
Sbjct: 254 VFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 313
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+KCG I AI +FE +N+ TW+AM+ G A+HG ++ F +M +A ++P V +
Sbjct: 314 SKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYI 373
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L CSHAGLV+E R+ F +M SV G+ ++HYGCM DLLGR GL++EA E I MP+
Sbjct: 374 NLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPI 433
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D +W LLG CR+H NVE+ + A +M + P D G Y L+++YA+ W +V ++
Sbjct: 434 KPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEM 493
Query: 469 RRSLDAGKIKKNAGCSLIQLNG 490
R + I+K+ GCS I ++G
Sbjct: 494 RLRMKEMDIRKDPGCSWIDIDG 515
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 279/520 (53%), Gaps = 48/520 (9%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I T+ Q+HQIHA L S ++T ++ +SS + L YAL
Sbjct: 46 LIHASNTLPQLHQIHAQIFLHNLF--SNSRVVTQLI-----------SSSCSLKSLDYAL 92
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
SIF +P+ F +N +IR S +V F M +SI PD + PF+L++ + L
Sbjct: 93 SIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALV 152
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVY----------------------------- 156
L + +H V+KLG D FV SL+ +Y
Sbjct: 153 DVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWN 212
Query: 157 ------CVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
C L A LF+ + R+ S N+LI+G+V+ GDL AR+LF +MP ++ VS
Sbjct: 213 VLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVS 272
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W T++ G++Q+ E+A+ +F M++ ++P+++ +VSAL AC ++G L+ G+ IH Y+
Sbjct: 273 WTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLS 332
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
N +++ + T LVD YAKCG I +A +F ++ K+L TW+ M+ G A+HG +L
Sbjct: 333 SNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQ 392
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F +M A I PD V L L CSH+G VD+ F+ M Y + +KHY + DLL
Sbjct: 393 CFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLL 452
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
GRAG ++EAL I+ MP+ D +W L CR H N+E+AE AE +++L+P+ G Y
Sbjct: 453 GRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYV 512
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
L++VYA RWEDV ++R + ++K+ G S I++ G
Sbjct: 513 FLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEG 552
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 287/514 (55%), Gaps = 44/514 (8%)
Query: 7 IKRCKTIKQIHQIH-AHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I T++QIH + + T + FL +LTT A++ P + TT YA+
Sbjct: 11 ITNLGTLRQIHALMIVNGFTSNVGFLRKL-VLTT---AMSMVGP-----AATTAVTQYAV 61
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F IP P TF +NT IR + P++AV L++QM S+ PD ++FP +L+AC++L
Sbjct: 62 QMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLF 121
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLM--HVYC--------VFHR-------------- 161
+ +H +V +LGF +V V N+L+ H C +F
Sbjct: 122 WVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIA 181
Query: 162 -------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
L A++LFDE+ RD+VS N +I Y K G++ AR+LFD P +D VSW +
Sbjct: 182 GYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAM 241
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQ 273
V GY + +EA++LF M ++ PD + ++S LSACA LG+ G+ +H + +ELN+
Sbjct: 242 VGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLGD--XGEKVHAKIMELNK 299
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
++ + L LVD YAKCG I + +F ++K++ +WN+++ GLA HG SL F
Sbjct: 300 GKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFR 359
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
M ++ PD +T +G L CSH G VDE + F M++ Y + ++H GC+ D+L RA
Sbjct: 360 EMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARA 419
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
GL++EA + I M + + VW LLG C++HG+VE+A+ A E +++++ + G Y +L+
Sbjct: 420 GLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLS 479
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+VYA+ W+ +R+ +D + K G S ++
Sbjct: 480 NVYASHGEWDGAENVRKLMDDNGVTKTRGSSFVE 513
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 171/387 (44%), Gaps = 60/387 (15%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ P S+N ++ + L + A+ LF +M V PD + LL AC+
Sbjct: 223 ARRLFDEAPMKDVVSWNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACAD 282
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H+++++L + L++L+ N L
Sbjct: 283 L--GDXGEKVHAKIMEL----NKGKLSTLLG--------------------------NAL 310
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K G++ +F + +D VSW +++ G A EE++ LF M + PD
Sbjct: 311 VDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDE 370
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAIEIF 301
I V L+AC+ G +++G N + Y+ N+ +++ + +VD A+ G + A +
Sbjct: 371 ITFVGVLAACSHTGNVDEG-NRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFI 429
Query: 302 ESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL- 359
S + E N W ++L +HG L+ +++ R+ G +L + V SH
Sbjct: 430 ASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWD 489
Query: 360 -VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+ RKL D+ GV+K R EA I+ P+ G L
Sbjct: 490 GAENVRKLMDD----NGVTKT------------RGSSFVEAYR-IEPNPVNGRT-----L 527
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPED 445
LG C ++G+VE+A+ E +++L+ ++
Sbjct: 528 LGACIVYGDVELAKRVNEELLRLRRDE 554
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 292/548 (53%), Gaps = 76/548 (13%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ CKT+ + ++ A +T G F ++ ++ + K +++A
Sbjct: 30 SLLRSCKTVALLQKVQAQIITHG--FQYNGYVAPNVVTSWVGLKQ-----------MAHA 76
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F++ P P +N I R + + V LF +M+++ + P+ ++FP +L++C+++
Sbjct: 77 RHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKI 136
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC--------------------------- 157
+ + IH +V+K G + FV +L+ VY
Sbjct: 137 GAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMI 196
Query: 158 ----VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
+ +R+ A+ LFD RDVV N ++ GY++ GD+ AR+LFD MP+RD +SW T
Sbjct: 197 SGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNT 256
Query: 214 LVAGYAQSDQCEEAIQLFCNM--------------------------------MDLDIKP 241
++ GYA + E QLF M +D + P
Sbjct: 257 MLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVP 316
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
++ LV+ LSACARLG L+ GK +H Y + ++ L+D Y+KCG I A+E+F
Sbjct: 317 NDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVF 376
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
ES K+L TWN+M+ GLA HG G +L F +M KPDG+T +G L C+H GLV+
Sbjct: 377 ESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVE 436
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E F+ M + Y ++ +++HYGCM DL GRAGL++ A+E +K+MPM D +W+ LLG
Sbjct: 437 EGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGA 496
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRI+ N+++AE A + ++ L+P++ Y +L+++Y + RW+DV +++ + KK
Sbjct: 497 CRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLP 556
Query: 482 GCSLIQLN 489
GCSLI++N
Sbjct: 557 GCSLIEVN 564
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/414 (38%), Positives = 254/414 (61%), Gaps = 2/414 (0%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
++N ++ + + +LF +M + P+ + +L ACS+L + I+ +
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIY-KY 233
Query: 138 LKLGFICDVFVL-NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
+ G + +L N L+ ++ + +AQ +FD + RDV+S +++ G+ G + A
Sbjct: 234 INGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLA 293
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
R+ FD++P RD VSW ++ GY + ++ EA+ LF M ++KPD +VS L+ACA L
Sbjct: 294 RKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHL 353
Query: 257 GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML 316
G LE G+ + YI+ N I+ D+F+ L+D Y KCG + A ++F+ K+ FTW AM+
Sbjct: 354 GALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMI 413
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
VGLA++G G +L FS MIEA I PD +T +G L C+HAG+V++ + F M +G+
Sbjct: 414 VGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGI 473
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
+ HYGCM DLLGRAG +EEA E+I MP+ + VW LLG CR+H NV++AE AA+
Sbjct: 474 KPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAK 533
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++L+PE+G VY +L ++YA RWE++ ++R+ + IKK GCSL++LNG
Sbjct: 534 QILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNG 587
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 218/467 (46%), Gaps = 89/467 (19%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGL----LFLSPCHILTTILYAITTFKPISSASSPTTDP 60
+ +++CK++ Q+ QIH+H + GL LF + I+ + +
Sbjct: 12 SLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQK---------------RVIAFCCAHESGK 56
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA +F+ IP P+ F +NT+I+ ++ + P N V ++ M +I PD ++FPFLL+
Sbjct: 57 MIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKG 116
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ + + + + +K GF ++FV + +H++ + + A+++FD +VV+
Sbjct: 117 FTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTW 176
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ GY + ++ LF M R +
Sbjct: 177 NIMLSGYNRVKQFKKSKMLFIEMEKR-------------------------------GVS 205
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+++ LV LSAC++L +LE GK+I++YI + + L L+D +A CG ++ A +
Sbjct: 206 PNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSV 265
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF---------------------SRMIEA- 338
F++ + +++ +W +++ G A G L+ YF +R IEA
Sbjct: 266 FDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEAL 325
Query: 339 ---------RIKPDGVTILGALVGCSHAGLVD--EARKLFDEMESVYGVSKELKHYG-CM 386
+KPD T++ L C+H G ++ E K + + S+ K G +
Sbjct: 326 ALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSI----KNDTFVGNAL 381
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
D+ + G + +A ++ K+M D F W+ ++ G I+G+ E A A
Sbjct: 382 IDMYFKCGNVGKAKKVFKEMH-HKDKFTWTAMIVGLAINGHGEEALA 427
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 130/293 (44%), Gaps = 7/293 (2%)
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
++G + +ARQ+FD +P W T++ GY++ + + + ++ M+ +IKPD
Sbjct: 53 ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPF 112
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L R L+ GK + + + + F+ + ++ C ++ A ++F+
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ TWN ML G + S + F M + + P+ VT++ L CS ++ + ++
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
+ V + L + D+ G ++EA + M DV W+ ++ G G +
Sbjct: 233 YINGGI-VERNLILENVLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFANIGQI 290
Query: 429 EIAEAAAEHVMKLKPEDGGV-YKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
++A + + PE V + + D Y +R+ + + + R + +K +
Sbjct: 291 DLARKYFDQI----PERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPD 339
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 265/484 (54%), Gaps = 17/484 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I + KTI + QIHA GL + I FK S +S L Y++
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDH-----------HPILNFKLQRSYAS--LGRLDYSV 82
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
++F PS F + II H L A+ ++QM T + P+ ++F +L+ LC
Sbjct: 83 ALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK----LC 138
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ +HSQ +KLGF D++V L+ VY + AQ+LFD + + +VS ++
Sbjct: 139 PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLT 198
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y K G+L AR LFD M RD V W ++ GY Q+ EA+ LF M+ KP+ +
Sbjct: 199 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVT 258
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
++S LSAC +LG LE G+ +H YIE N I+ + + T LVD Y+KCG + A +F+
Sbjct: 259 VLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 318
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+K++ WN+M+VG AMHG + +L F M + P +T +G L C H+G V E
Sbjct: 319 DKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 378
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+F++M+ YG+ +++HYGCM +LLGRAG +E+A E++K M + D +W LLG CR+H
Sbjct: 379 IFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLH 438
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G + + E E ++ + G Y +L+++YA W+ V ++R + +KK GCS
Sbjct: 439 GKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSS 498
Query: 486 IQLN 489
I++N
Sbjct: 499 IEVN 502
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 292/548 (53%), Gaps = 76/548 (13%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ CKT+ + ++ A +T G F ++ ++ + K +++A
Sbjct: 72 SLLRSCKTVALLQKVQAQIITHG--FQYNGYVAPNVVTSWVGLKQ-----------MAHA 118
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F++ P P +N I R + + V LF +M+++ + P+ ++FP +L++C+++
Sbjct: 119 RHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKI 178
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC--------------------------- 157
+ + IH +V+K G + FV +L+ VY
Sbjct: 179 GAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMI 238
Query: 158 ----VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
+ +R+ A+ LFD RDVV N ++ GY++ GD+ AR+LFD MP+RD +SW T
Sbjct: 239 SGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNT 298
Query: 214 LVAGYAQSDQCEEAIQLFCNM--------------------------------MDLDIKP 241
++ GYA + E QLF M +D + P
Sbjct: 299 MLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVP 358
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
++ LV+ LSACARLG L+ GK +H Y + ++ L+D Y+KCG I A+E+F
Sbjct: 359 NDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVF 418
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
ES K+L TWN+M+ GLA HG G +L F +M KPDG+T +G L C+H GLV+
Sbjct: 419 ESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVE 478
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E F+ M + Y ++ +++HYGCM DL GRAGL++ A+E +K+MPM D +W+ LLG
Sbjct: 479 EGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGA 538
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRI+ N+++AE A + ++ L+P++ Y +L+++Y + RW+DV +++ + KK
Sbjct: 539 CRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLP 598
Query: 482 GCSLIQLN 489
GCSLI++N
Sbjct: 599 GCSLIEVN 606
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/428 (37%), Positives = 262/428 (61%), Gaps = 1/428 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F N+P S+N +I A L P A++LF +M + P+ + +L AC++
Sbjct: 227 AHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAK 286
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ I S + GF + + N+++ +Y + DA++LF+++ +D+VS T+
Sbjct: 287 KIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTM 346
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPD 242
+DG+ K G+ A +FD MP + +W L++ Y Q+ + A+ LF M + D KPD
Sbjct: 347 LDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPD 406
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ L+ AL A A+LG ++ G IH YI+ + I ++ L+T L+D YAKCG +N A+E+F
Sbjct: 407 EVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFH 466
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ + K+++ W+AM+ LAM+G G+ +L FS M+EA IKP+ VT L C+HAGLV+E
Sbjct: 467 AVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNE 526
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+LF++ME +YG+ +++HY C+ D+ GRAGL+E+A I+KMP+ VW LLG C
Sbjct: 527 GEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGAC 586
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
HGNVE+AE A +++++L+P + G + +L+++YA A WE V +R+ + +KK
Sbjct: 587 SRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPW 646
Query: 483 CSLIQLNG 490
CS I +NG
Sbjct: 647 CSSIDVNG 654
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 212/464 (45%), Gaps = 87/464 (18%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
FI +C Q+ QIHAH L + F P T K +++ + + L YA
Sbjct: 78 FIDQCTNTMQLKQIHAHML-RTSRFCDP----------YTASKLLTAYAISSCSCLIYAK 126
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQL 124
++FN IP P+ + +NT+IR + S P + ++F M + S P+ ++FPFL +A S+L
Sbjct: 127 NVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRL 186
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
L +H V+K D+F+LNSL++ Y
Sbjct: 187 KVLHLGSVLHGMVIKASLSSDLFILNSLINFY---------------------------- 218
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
G A DLAH ++F MP +D VSW ++ +A ++A+ LF M D+KP+ I
Sbjct: 219 -GSSGAPDLAH--RVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVI 275
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VS LSACA+ +LE G+ I YIE N L+ ++D Y KCG IN A ++F
Sbjct: 276 TMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKM 335
Query: 305 QEKNLFTWNAMLVGLA-------------------------------MHGLGRLSLVYFS 333
EK++ +W ML G A +G R++L F
Sbjct: 336 SEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFH 395
Query: 334 RM-IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC-----MA 387
M + KPD VT++ AL + G +D F VY + K + C +
Sbjct: 396 EMQLSKDAKPDEVTLICALCASAQLGAID-----FGHWIHVY-IKKHDINLNCHLATSLL 449
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
D+ + G + +A+E+ + DV+VWS ++G ++G + A
Sbjct: 450 DMYAKCGNLNKAMEVFHAVER-KDVYVWSAMIGALAMYGQGKAA 492
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 93/224 (41%), Gaps = 34/224 (15%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A+ +F+ + + ++ +I A ++ A+ LFS M I P+ +F +L A
Sbjct: 458 LNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCA 517
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + + Q+ L ++ + H CV
Sbjct: 518 CNHAGLVNEGEQLFEQMEPL-----YGIVPQIQHYVCV---------------------- 550
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPF-RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+D + +AG L A ++MP A WG L+ ++ E A + N+++L+
Sbjct: 551 ---VDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELE- 606
Query: 240 KPDNIALVSALSAC-ARLGELEQGKNIHRYIELNQIRVDSFLST 282
P N LS A+ G+ E+ N+ + + + ++ + + S+
Sbjct: 607 -PCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSS 649
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 281/485 (57%), Gaps = 18/485 (3%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C ++ ++ Q H+ L GL + H ++ I TF +S ++YAL +F
Sbjct: 12 CSSMAEVKQQHSLLLRLGLS--TNNHAMSRIF----TFCSLSKHGD-----INYALKLFT 60
Query: 70 NIPYPSTFSYNTIIRAH-TLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+P P TF YNT+ +A +L +P +++ +S M + P+ ++FP L+RAC
Sbjct: 61 TLPNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKL---EE 117
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
A+ +H+ VLK GF D + LN+L+HVY F L DA+ +F + +VVS +L+ GY
Sbjct: 118 EAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYS 177
Query: 189 KAGDLAHARQLFDRMPFR-DAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNIAL 246
+ G + A ++F+ MP + ++VSW ++A + + ++ EA LF M ++ ++ D
Sbjct: 178 QWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVA 237
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ LSAC +G LEQG IH+Y+E I +DS L+T ++D Y KCG ++ A +F +
Sbjct: 238 ATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKV 297
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDEARK 365
K + +WN M+ G AMHG G ++ F M E A + PD +T + L C+H+GLV+E
Sbjct: 298 KRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWY 357
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F M V+G+ +HYGCM DLL RAG +EEA ++I +MPM D V LLG CRIH
Sbjct: 358 YFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIH 417
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
GN+E+ E V++L PE+ G Y +L ++YA+ +WE V +R+ +D +KK G S+
Sbjct: 418 GNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSM 477
Query: 486 IQLNG 490
I++ G
Sbjct: 478 IEMEG 482
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 160/405 (39%), Gaps = 64/405 (15%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS---PTT 58
T + I+ CK ++ Q+HAH L G F + L +++ F + A +
Sbjct: 105 TFPSLIRACKLEEEAKQLHAHVLKFG--FGGDTYALNNLIHVYFAFGSLDDARRVFCTMS 162
Query: 59 DP-----------------LSYALSIFNNIP-YPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
DP + A +F +P ++ S+N +I + A LF
Sbjct: 163 DPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFR 222
Query: 101 QMRT-VSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
+MR + D + +L AC+ + + IH V K G + D +
Sbjct: 223 RMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKL----------- 271
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
T+ID Y K G L A +F + + SW ++ G+A
Sbjct: 272 --------------------ATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFA 311
Query: 220 QSDQCEEAIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHRY-IELNQIRVD 277
+ E+AI+LF M + + PD+I V+ L+ACA G +E+G RY ++++ I
Sbjct: 312 MHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPT 371
Query: 278 SFLSTGLVDFYAKCGYINTAIEIF-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
+VD A+ G + A ++ E + A+L +HG L +R+I
Sbjct: 372 KEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVI 431
Query: 337 EARIKPDG-VTILGAL-VGCSHAGLVDEARKLFDEMESVYGVSKE 379
E + G ILG + C V RKL D+ GV KE
Sbjct: 432 ELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDR----GVKKE 472
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 293/548 (53%), Gaps = 79/548 (14%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ +C + Q+ Q+HA + + L HI ++ A++ + + A+
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLH--EDLHIAPKLISALSLCRQTN-----------LAVR 72
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN + P+ N++IRAH S P A +FS+M+ + D +++PFLL+ACS
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYC------------VFHR------------- 161
+ + +H+ + KLG D++V N+L+ Y +F +
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
Query: 162 --------LRDAQELFDEILYRDVVSCNTLIDGYV------------------------- 188
LRDA+ LFDE+ RD++S NT++DGY
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWST 252
Query: 189 ------KAGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
KAGD+ AR +FD+MP ++ V+W ++AGYA+ +EA +L M+ +K
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D A++S L+AC G L G IH ++ + + ++++ L+D YAKCG + A ++
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +K+L +WN ML GL +HG G+ ++ FSRM I+PD VT + L C+HAGL+
Sbjct: 373 FNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLI 432
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE F ME VY + +++HYGC+ DLLGR G ++EA+++++ MPM +V +W LLG
Sbjct: 433 DEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLG 492
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+H V+IA+ ++++KL P D G Y +L+++YA A+ WE V IR + + ++K
Sbjct: 493 ACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKP 552
Query: 481 AGCSLIQL 488
+G S ++L
Sbjct: 553 SGASSVEL 560
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 282/480 (58%), Gaps = 15/480 (3%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C T+ Q+HAH L +++T +L ITT I + P +F+
Sbjct: 21 CTTLNHAKQLHAHIYRNNLH--QSSYVITNLLRFITTLPHIPVHTYPHL--------LFS 70
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ P+ F Y+ +IRA+ +++ L++ M ++ P ++F L S L + SL
Sbjct: 71 QVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALF---SLLKNPSL 127
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+H GF+ D++V N+++H+Y F L A+++FDE+ +RDVV+ LI Y +
Sbjct: 128 GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYAR 187
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
+GD+ A +LF +P +D V+W ++V GY+Q+ ++A+Q F M + + D I LV A
Sbjct: 188 SGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGA 247
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIEIFESSQEK 307
+SACA+LG I E ++ S F+ + L+D Y+KCG + A +F+ +E
Sbjct: 248 ISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEM 307
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
N+F++++M+VG A+HG R ++ F M+E IKP+ VT +G CSHAG+V++ ++LF
Sbjct: 308 NVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLF 367
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
M+ YGVS HY CMADLLGRAG +E+AL++++ MPM + VW LLG IHGN
Sbjct: 368 GAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGN 427
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
++AE A+ + +L+P++ G Y +L+ YA A +W+DV ++R+ + +++KN GCS ++
Sbjct: 428 PDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVE 487
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/486 (36%), Positives = 278/486 (57%), Gaps = 26/486 (5%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + QI QIH H L KGL C+ILT ++ +T DP YA +
Sbjct: 59 CINLNQIKQIHGHVLRKGLD--QSCYILTKLIRTLTKL-------GVPMDP--YARRVIE 107
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ + + F + +IR + + A+ ++ MR I P ++F LL+AC + +L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ H+Q +L C V+V N+++ +Y + A+++FDE+ RDV+S LI Y +
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G++ A +LF+ +P +D V+W +V G+AQ+ + +EA++ F M I+ D + +
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDS-----FLSTGLVDFYAKCGYINTAIEIFESS 304
+SACA+LG K R +++ Q S + + L+D Y+KCG + A+ +F S
Sbjct: 288 ISACAQLG---ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEA 363
KN+FT+++M++GLA HG + +L F M+ + IKP+ VT +GAL+ CSH+GLVD+
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM---PMGGDVFVWSGLLG 420
R++FD M +GV HY CM DLLGR G ++EALE+IK M P GG VW LLG
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGG---VWGALLG 461
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIH N EIAE AAEH+ +L+P+ G Y +L++VYA+A W V+++R+ + +KK
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 481 AGCSLI 486
S +
Sbjct: 522 PAVSWV 527
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 276/493 (55%), Gaps = 19/493 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+++CK++K + Q HA T GL +A++ S+ + L+YA
Sbjct: 11 LLEKCKSMKHLKQAHAQVFTTGL---------ENNTFALSRVLAFCSSHKHHHESLTYAC 61
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F I P+ YNT+I+A + + +A+ +F +M + PD Y+ P++L+AC
Sbjct: 62 RVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFH 121
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S + IH KLG + D++V NSLM +YCVF + A+ +FDEI +VVS + +I
Sbjct: 122 DCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMIS 181
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY K GD+ AR FD P +D WG +++GY Q+ +E++ LF M DI PD
Sbjct: 182 GYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESI 241
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSF---LSTGLVDFYAKCGYINTAIEIFE 302
VS LSACA LG LE G IH++ LNQ+++ LST L+D YAKCG + A +F+
Sbjct: 242 FVSILSACAHLGALEIGVWIHQH--LNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFD 299
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
S +++ WNAM+ G+AMHG G+ +L F M + +KPD +T + CS++G+ E
Sbjct: 300 SMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYE 359
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG----DVFVWSGL 418
L D+M SVY + + +HYGC+ DLL RAGL EEA+ MI+K+ + W
Sbjct: 360 GLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAF 419
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPE-DGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
L C HG ++AE AAE V++L GVY +L+++YA + + D ++R +
Sbjct: 420 LSACCNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGT 479
Query: 478 KKNAGCSLIQLNG 490
K GCS ++++G
Sbjct: 480 NKAPGCSSVEIDG 492
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 283/522 (54%), Gaps = 49/522 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I KTI Q+HQIHA + L S ++TT L + SS ++++
Sbjct: 86 SLIHGSKTILQLHQIHAQIIIHNL---SSSSLITTQLIS----------SSSLRKSINHS 132
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
L++FN+ + F++N +IR T S NA+ F M I PD ++PF+L++ + L
Sbjct: 133 LAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGL 192
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE-----------IL 173
S L IH +L+ G D FV SL+ +Y +L A ++FDE +L
Sbjct: 193 FSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALL 252
Query: 174 Y-------------------------RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA 208
+ ++ VS +TLIDG+ K GD+ A +LFD+MP ++
Sbjct: 253 WNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNV 312
Query: 209 VSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRY 268
VSW T+V G++++ E+A+ +F M++ ++P+ +VSALSACA++G LE G IH+Y
Sbjct: 313 VSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKY 372
Query: 269 IELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
I+ N + + L T LVD YAKCG I +A E+F +++K++ TW M+ G A+HG +
Sbjct: 373 IKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQA 432
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
+ F +M+ A IKPD V L L C H+G VD FD M Y + +KHY + D
Sbjct: 433 IACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVD 492
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
+LGR+G ++EAL I++MPM D +W L CR H ++A+ A ++KL+P G
Sbjct: 493 MLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGN 552
Query: 449 YKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
Y L++ YA +WED ++R + + KN+G S I++ G
Sbjct: 553 YIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEG 594
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 242/379 (63%), Gaps = 6/379 (1%)
Query: 118 LRACSQLCSHSLAQTI-----HSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDE 171
LRA ++L SH L +++ HS +L+ G + D V SL+ +YC + DA+ +F E
Sbjct: 80 LRAAARLPSHLLRRSLLGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHE 139
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+ RDVV+ N +I GYVKAGDLAHAR+LFD MP R+ VSW T++ GYAQ + EEA+++F
Sbjct: 140 MAVRDVVAWNVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVF 199
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M I+PD +AL+S LSAC LG ++ G+ +HR++ +R + L ++D Y KC
Sbjct: 200 RRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKC 259
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G I A+E+FE +EK++ TW ++ G A+HGLG ++ F RM + P+ VT L L
Sbjct: 260 GCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAIL 319
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
CSH GL D R F+ M S Y + +++HYGCM DLLGRAG ++EA +++K MP+ +
Sbjct: 320 SACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKAN 379
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
+W LL R HG+ ++ E A H+++L+P + G Y +L++++A +RW+DV K+R++
Sbjct: 380 AAIWGALLAASRTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKA 439
Query: 472 LDAGKIKKNAGCSLIQLNG 490
+ ++ G S I+++G
Sbjct: 440 MKERGLRNVPGASSIEVDG 458
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L++A +F+ +P + S+ T+I + P AV +F +M+ I PD + +L A
Sbjct: 161 LAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSA 220
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L + L + +H V++ G ++ ++NS++ +Y + A E+F+ + + VV+
Sbjct: 221 CGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTW 280
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
TLI AG+A +A+++F M ++
Sbjct: 281 TTLI-------------------------------AGFALHGLGLQAVEMFRRMERENMA 309
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAI 298
P+++ ++ LSAC+ +G + G+ + I ++Q R+ + +VD + G + A
Sbjct: 310 PNDVTFLAILSACSHVGLTDLGR-WYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQ 368
Query: 299 EIFESSQEK-NLFTWNAMLVGLAMHG---LGRLSLVYF 332
++ + K N W A+L HG LG +LV+
Sbjct: 369 DLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHL 406
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 280/483 (57%), Gaps = 24/483 (4%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++Q+ QIH + L G+ IL L I L YA + ++ P
Sbjct: 1 MRQVKQIHGYTLRNGI---DQTKILIEKLLEIPN--------------LHYAHKVLHHSP 43
Query: 73 YPSTFSYNTIIRAHTLFSSPLNA---VVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
P+ F YN +I+A++ S P + L+SQM S P+ ++F FL AC+ L S SL
Sbjct: 44 KPTLFLYNKLIQAYS--SHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSL 101
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
Q +H+ +K GF D+F +L+ +Y L A++LFD++ R V + N ++ G+ +
Sbjct: 102 GQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHAR 161
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNIALVS 248
GD+ A +LF MP R+ VSW T+++GY++S + EA+ LF M + + P+ + L S
Sbjct: 162 FGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLAS 221
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF-ESSQEK 307
A A LG LE G+ + Y N + ++S +++ YAKCG I+ A ++F E +
Sbjct: 222 IFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLR 281
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
NL +WN+M++GLA+HG +L + +M+ PD VT +G L+ C+H G+V++ R +F
Sbjct: 282 NLCSWNSMIMGLAVHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIF 341
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
M + + + +L+HYGCM DLLGRAG + EA E+I++MPM D +W LLG C H N
Sbjct: 342 KSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDN 401
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
VE+AE AAE + L+P + G Y +L+++YA+A +W+ V K+R+ + KI K+AG S I+
Sbjct: 402 VELAEIAAESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIE 461
Query: 488 LNG 490
G
Sbjct: 462 EGG 464
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 262/433 (60%), Gaps = 3/433 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLL 118
++YA IF+ ++N ++ + F + LF +M + + P+ + +L
Sbjct: 187 VNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLML 246
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVL-NSLMHVYCVFHRLRDAQELFDEILYRDV 177
ACS+L + I+++ +K G + +L N+L+ ++ + A+ +FDE+ RDV
Sbjct: 247 SACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDV 306
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+S +++ G+ + AR+ FD+MP RD VSW ++ GY + ++ +E + LF +M
Sbjct: 307 ISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMS 366
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++KPD +VS L+ACA LG LE G+ YI+ N+I+ D+F+ L+D Y KCG + A
Sbjct: 367 NVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKA 426
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+IF Q+K+ FTW AM+VGLA +G G +L FS M+EA + PD +T +G + C+H
Sbjct: 427 KKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHV 486
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLV + + F M +G+ L HYGCM DLLGRAG ++EALE+I MP+ + VW
Sbjct: 487 GLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGS 546
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG CR+H NV++AE AA +++L+PE+G VY +L ++YA +W+++ +R+ + I
Sbjct: 547 LLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGI 606
Query: 478 KKNAGCSLIQLNG 490
KK GCSL+++NG
Sbjct: 607 KKIPGCSLMEMNG 619
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 211/464 (45%), Gaps = 83/464 (17%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C T+ +I+QIH+ + GL S H+ T K I + + + YA
Sbjct: 40 SLLETCNTMYEINQIHSQTIKTGL---SSNHLFLT--------KVIIFCCTKESGDVYYA 88
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ IP PS F +NT+I+ ++ + + V L+ M +I PD ++FPFLL+ ++
Sbjct: 89 RKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKD 148
Query: 125 CSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + + + GF+ ++FV +H++ + + A+++FD +VV+ N +
Sbjct: 149 MALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVV 208
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY + +++LF M +CE C + P++
Sbjct: 209 LSGYNRFKRYEESKRLFIEM-----------------EKKCE------C------VSPNS 239
Query: 244 IALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ LV LSAC++L +L GK I+ +YI+ + + L L+D +A CG ++ A +F+
Sbjct: 240 VTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFD 299
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE------------------------- 337
+ +++ +W +++ G A L+ YF +M E
Sbjct: 300 EMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTL 359
Query: 338 ------ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH----YGCMA 387
+ +KPD T++ L C+H G ++ E Y ++K+ +
Sbjct: 360 FRDMQMSNVKPDEFTMVSILTACAHLGALE-----LGEWAKTYIDKNKIKNDTFIGNALI 414
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
D+ + G +E+A ++ +M D F W+ ++ G +G+ E A
Sbjct: 415 DMYFKCGNVEKAKKIFNEM-QKKDKFTWTAMIVGLANNGHGEEA 457
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 291/487 (59%), Gaps = 21/487 (4%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTF---KPISSASSPTTDPLSYA 64
K C T++ + Q HAH + G AI +F + ++ +SP + + YA
Sbjct: 32 KYCTTMRDLQQFHAHLIKSG--------------QAIESFAASRILAFCASPLGN-MDYA 76
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQ 123
+F + P+ FS+NT+IR + S+P A+ LF M S + P ++P + +A SQ
Sbjct: 77 YLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQ 136
Query: 124 L-CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L +H AQ +H +++KLG D F+ N+++++Y L +A+ +F++ + DVVS N+
Sbjct: 137 LGLAHDGAQ-LHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNS 195
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I G K G++ +R+LFD+MP ++ +SW +++ GY ++ +EA++LF M + I+P
Sbjct: 196 MILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPS 255
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+VS L+A A++G L QG IH YI+ N +++++ + T ++D Y KCG I A+++FE
Sbjct: 256 EFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFE 315
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
++L +WN+M+ GLA++G + +++ F + + +KPD ++ + L C+H +VDE
Sbjct: 316 KIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDE 375
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ F M++ Y + +KHY M D++ RAG +EEA + IK MP+ D +W LL C
Sbjct: 376 GMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSAC 435
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RI+GN E+A+ AAE V +L PE+ Y ++A+++A + + ++ R ++ K++K G
Sbjct: 436 RIYGNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPG 495
Query: 483 CSLIQLN 489
S I+++
Sbjct: 496 GSFIEVD 502
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 255/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS A +FN ++N++I + A+ ++ +M + P+ + ++ +
Sbjct: 209 LSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISS 268
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CSQ+ +L + H + + G + + N+LM +Y L A+ LFD + + +VS
Sbjct: 269 CSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSW 328
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
T++ GY + G L AR++ ++P + V W +++G Q+ Q +EA+ LF M I+
Sbjct: 329 TTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIE 388
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + +V+ LSAC++LG L+ G IH YIE +++ +D L T LVD YAKCG I A+++
Sbjct: 389 PDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQV 448
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE ++N TW A++ GLA+HG + +L YFS+MI I PD +T LG L C H GLV
Sbjct: 449 FEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLV 508
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E RK F EM S + VS +LKHY CM DLLGRAG +EEA E++K MPM D V L
Sbjct: 509 EEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFF 568
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR++GNV+I E A ++++ P+D G Y +LA +Y+ A W++ R+ ++ ++K
Sbjct: 569 ACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKT 628
Query: 481 AGCSLIQLNG 490
GCSL+++NG
Sbjct: 629 PGCSLVEING 638
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 203/459 (44%), Gaps = 76/459 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++RCK++ Q+ QI A ++ GL I + ++ + + L Y
Sbjct: 62 SILERCKSLVQLKQIQAQMVSTGL-----------IENGFAASRLVAFCALSESKELDYC 110
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLRACSQ 123
I I + FS+N IR + +L+ +M ++ PD +++P LL+ C
Sbjct: 111 TRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCG 170
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S L + VLK GF CD+FV N+ + + L A ++F++ RD+V+ N++
Sbjct: 171 QYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSM 230
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G VK G LA EAI+++ M ++P+
Sbjct: 231 ITGCVKRG-LAI------------------------------EAIKIYKEMEAEKVRPNE 259
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I ++ +S+C+++ +L GK H YI+ + + L+ L+D Y KCG + TA +F++
Sbjct: 260 ITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDN 319
Query: 304 SQEKNLFTWNAMLVGLAMHGL-------------------------------GRLSLVYF 332
+K L +W M++G A G G+ +L F
Sbjct: 320 MAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALF 379
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
M I+PD VT++ L CS G +D + +E + +S ++ + D+ +
Sbjct: 380 HEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAK 438
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G I AL++ +++P + W+ ++ G +HGN + A
Sbjct: 439 CGNIARALQVFEEIPQ-RNCLTWTAVICGLALHGNAQDA 476
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 152/415 (36%), Gaps = 117/415 (28%)
Query: 56 PTTDPLSYALSIFNN----IPYPSTFSYNT---IIRAHTLFSSPLNAVVLFSQMRTVSIP 108
PT L +SIF+N P T ++NT +R + L S
Sbjct: 21 PTPQNLGIIISIFHNSSSLSPITKTINWNTTHSFVRENPLLS------------------ 62
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
+L C L + I +Q++ G I + F + L+ F L +++EL
Sbjct: 63 --------ILERCKSLVQ---LKQIQAQMVSTGLIENGFAASRLV----AFCALSESKEL 107
Query: 169 --FDEILYR----DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
ILYR +V S N I GYV++GD+ L+ RM L+ G
Sbjct: 108 DYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRM----------LLGG----- 152
Query: 223 QCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
+KPDN L C G + ++ D F+
Sbjct: 153 ---------------TLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHN 197
Query: 283 GLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKP 342
+ CG ++ A ++F S+ ++L TWN+M+ G GL ++ + M +++P
Sbjct: 198 ASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRP 257
Query: 343 DGVTILGALVGCSHA-----------------------------------GLVDEARKLF 367
+ +T++G + CS G + AR LF
Sbjct: 258 NEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLF 317
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
D M K L + M R G ++ A E++ K+P V W+ ++ GC
Sbjct: 318 DNM-----AQKTLVSWTTMVLGYARFGFLDVAREILYKIPE-KSVVPWNAIISGC 366
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 169/429 (39%), Positives = 250/429 (58%), Gaps = 2/429 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLLRAC 121
A +F+ P S+NT+I + P A+ LF ++ ++ PD + + C
Sbjct: 175 ARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGC 234
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+Q+ L + +H V G C V ++N++M +Y L A+ +F+ I + VVS
Sbjct: 235 AQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWT 294
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
T+I G+ + G + AR LFD MP RD W L+AGY Q+ Q +EAI LF M + + P
Sbjct: 295 TMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDP 354
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ I +V+ LSAC++LG LE G +H YI+ +Q+ + L T LVD YAKCG I AI IF
Sbjct: 355 NEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIF 414
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ +KN TW AM+ GLA HG ++ YF RMI+ ++PD +T +G L C HAGLV
Sbjct: 415 KEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVK 474
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E R+ F M Y + +++KHY CM DLLGRAG ++EA +++ MPM D VW L
Sbjct: 475 EGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFA 534
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR+HGN+ + E AA +++L P D G+Y +LA++YA A+ + K+R + ++K
Sbjct: 535 CRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVP 594
Query: 482 GCSLIQLNG 490
GCS I+LNG
Sbjct: 595 GCSCIELNG 603
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 196/424 (46%), Gaps = 79/424 (18%)
Query: 50 ISSASSPTTDPLSYALSIFNNIPYP--STFSYNTIIRAHTLFSS---------PLNAVVL 98
+S +SP PL +AL+I ++P P S YN RA +L PL +L
Sbjct: 55 LSDPASPR--PLLHALAILASLPSPPDSASPYNAAFRALSLCPHRHLVDRHCLPLYRALL 112
Query: 99 FSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV 158
S S PD +FPFLL+AC++L + V KLGF DVFV+N+ +H + V
Sbjct: 113 CSS----SARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSV 168
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
+ A+ LFDE RDVVS NTLI GYV++G A +LF W + G
Sbjct: 169 SGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELF----------WRLVEDGK 218
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
A ++PD + ++ A+S CA++G+LE GK +H +++ +R
Sbjct: 219 A-------------------VRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTV 259
Query: 279 FLSTGLVDFYAKCGYINTAIEIFE-------------------------------SSQEK 307
L ++D Y KCG + A +FE E+
Sbjct: 260 RLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPER 319
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
++F WNA++ G + G+ ++ F M E+++ P+ +T++ L CS G ++ +
Sbjct: 320 DVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVH 379
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
++ + + + + D+ + G I++A+ + K++P + W+ ++ G HG+
Sbjct: 380 HYIDR-HQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIP-DKNALTWTAMICGLANHGH 437
Query: 428 VEIA 431
+ A
Sbjct: 438 ADEA 441
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 255/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS A +FN ++N++I + A+ ++ +M + P+ + ++ +
Sbjct: 209 LSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISS 268
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CSQ+ +L + H + + G + + N+LM +Y L A+ LFD + + +VS
Sbjct: 269 CSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSW 328
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
T++ GY + G L AR++ ++P + V W +++G Q+ Q +EA+ LF M I+
Sbjct: 329 TTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIE 388
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + +V+ LSAC++LG L+ G IH YIE +++ +D L T LVD YAKCG I A+++
Sbjct: 389 PDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQV 448
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE ++N TW A++ GLA+HG + +L YFS+MI I PD +T LG L C H GLV
Sbjct: 449 FEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLV 508
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E RK F EM S + VS +LKHY CM DLLGRAG +EEA E++K MPM D V L
Sbjct: 509 EEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFF 568
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR++GNV+I E A ++++ P+D G Y +LA +Y+ A W++ R+ ++ ++K
Sbjct: 569 ACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKT 628
Query: 481 AGCSLIQLNG 490
GCSL+++NG
Sbjct: 629 PGCSLVEING 638
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 204/461 (44%), Gaps = 76/461 (16%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + ++RCK++ Q+ QI A ++ GL I + ++ + + L
Sbjct: 60 LLSILERCKSLVQLKQIQAQMVSTGL-----------IENGFAASRLVAFCALSESKELD 108
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLRAC 121
Y I I + FS+N IR + +L+ +M ++ PD +++P LL+ C
Sbjct: 109 YCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGC 168
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S L + VLK GF CD+FV N+ + + L A ++F++ RD+V+ N
Sbjct: 169 CGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWN 228
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++I G VK G LA EAI+++ M ++P
Sbjct: 229 SMITGCVKRG-LAI------------------------------EAIKIYKEMEAEKVRP 257
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ I ++ +S+C+++ +L GK H YI+ + + L+ L+D Y KCG + TA +F
Sbjct: 258 NEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLF 317
Query: 302 ESSQEKNLFTWNAMLVGLAMHGL-------------------------------GRLSLV 330
++ +K L +W M++G A G G+ +L
Sbjct: 318 DNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALA 377
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M I+PD VT++ L CS G +D + +E + +S ++ + D+
Sbjct: 378 LFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMY 436
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G I AL++ +++P + W+ ++ G +HGN + A
Sbjct: 437 AKCGNIARALQVFEEIPQ-RNCLTWTAVICGLALHGNAQDA 476
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 152/415 (36%), Gaps = 117/415 (28%)
Query: 56 PTTDPLSYALSIFNN----IPYPSTFSYNT---IIRAHTLFSSPLNAVVLFSQMRTVSIP 108
PT L +SIF+N P T ++NT +R + L S
Sbjct: 21 PTPQNLGIIISIFHNSSSLSPITKTINWNTTHSFVRENPLLS------------------ 62
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
+L C L + I +Q++ G I + F + L+ F L +++EL
Sbjct: 63 --------ILERCKSLVQ---LKQIQAQMVSTGLIENGFAASRLV----AFCALSESKEL 107
Query: 169 --FDEILYR----DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
ILYR +V S N I GYV++GD+ L+ RM L+ G
Sbjct: 108 DYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRM----------LLGG----- 152
Query: 223 QCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
+KPDN L C G + ++ D F+
Sbjct: 153 ---------------TLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHN 197
Query: 283 GLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKP 342
+ CG ++ A ++F S+ ++L TWN+M+ G GL ++ + M +++P
Sbjct: 198 ASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRP 257
Query: 343 DGVTILGALVGCSHA-----------------------------------GLVDEARKLF 367
+ +T++G + CS G + AR LF
Sbjct: 258 NEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLF 317
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
D M K L + M R G ++ A E++ K+P V W+ ++ GC
Sbjct: 318 DNM-----AQKTLVSWTTMVLGYARFGFLDVAREILYKIPE-KSVVPWNAIISGC 366
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 252/424 (59%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + P + IIRA+ + P A+ LF MR V + PD + ++ AC L
Sbjct: 148 VFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGD 207
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+A+ +H + K G D FV ++L+ Y L A F E +++V NT+I
Sbjct: 208 LGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQ 267
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
V+ +L +QLF MP RD VSW +++ G+A+ Q +EA+ F M + P+ + L
Sbjct: 268 SVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTL 327
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S LSACA G L+ G IH Y++ N + D L + L+D Y+KCG I+ A++IFE S
Sbjct: 328 LSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTR 387
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++LFTW +++ GLAMHG G +L YFS+M EA+++PD VT++G L C+HAGL+D+
Sbjct: 388 RDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWY 447
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F ME V+G+ +++HYGCM DLLGR G ++EA ++I MPM + +W L CR+H
Sbjct: 448 FQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHN 507
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NVE+ E AA ++ L P D +L+++YA +W+ + +R+ + +KK+ GCS I
Sbjct: 508 NVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSI 567
Query: 487 QLNG 490
++NG
Sbjct: 568 EVNG 571
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 185/419 (44%), Gaps = 78/419 (18%)
Query: 75 STFSYNTIIRAHT----LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
+ F +NT+IR + P ++ + Q + P+ ++F +LL+A
Sbjct: 53 NVFVWNTMIRKQVENGLITRDP--PLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEG 110
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ +H+ V++ GF C FV +L+ Y V+C
Sbjct: 111 EEVHASVVRTGFACSEFVSGALLGFY---------------------VAC---------- 139
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G + RQ+FD M V W ++ Y E+A++LF M ++ + PD +A+ + +
Sbjct: 140 GLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVV 199
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
SAC LG+L K +H +IE + I VD+F+S+ L+ Y +CG ++ A F+ + KN+
Sbjct: 200 SACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIV 259
Query: 311 T-------------------------------WNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
WN+M+ G A G + +L +F M +
Sbjct: 260 VWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSG 319
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ P+ +T+L L C+ G +D + ++ ++++ + D+ + G I++A
Sbjct: 320 VSPNALTLLSTLSACASHGALDTGAWIHAYVDK-NDMNRDGSLDSSLIDMYSKCGDIDKA 378
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK-----PEDGGVYKVLA 453
+++ ++ D+F W+ ++ G +HG E A + K+K P+D + VL+
Sbjct: 379 VQIFEE-STRRDLFTWTSIVCGLAMHGR---GEKALHYFSKMKEAQVQPDDVTMVGVLS 433
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 33/278 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +F ++P S+N++I A+ F +M + P+ + L A
Sbjct: 274 LELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSA 333
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + IH+ V K D + +SL+ +Y + A ++F+E RD+
Sbjct: 334 CASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDL--- 390
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+W ++V G A + E+A+ F M + ++
Sbjct: 391 ----------------------------FTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQ 422
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD++ +V LSACA G L+QG + +E V G +VD + G + A +
Sbjct: 423 PDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYD 482
Query: 300 -IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
I E N W A L +H L V R++
Sbjct: 483 LIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLL 520
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 93/233 (39%), Gaps = 4/233 (1%)
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL--DIKPDNIALVSALSACARLGEL 259
R+ + W T++ ++ L M L ++P+ + L A E+
Sbjct: 48 RLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEV 107
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
++G+ +H + F+S L+ FY CG + ++F+ ++ L W ++
Sbjct: 108 KEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAY 167
Query: 320 AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
+L F M E + PD V I + C G + A+ + +E G+ +
Sbjct: 168 VCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKS-GIEVD 226
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
+ G G ++ A ++ PM ++ VW+ ++ H N+E+ +
Sbjct: 227 AFVSSTLISTYGECGSLDYAYRFFQETPM-KNIVVWNTMIHQSVEHNNLELGK 278
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 275/486 (56%), Gaps = 12/486 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+++C +++++ QIH +T GLL H+ +L T SP A
Sbjct: 9 LLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQL------GSPVD-----AQ 57
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+FN+I P S+ +I + S P A +FS + + PD + + AC
Sbjct: 58 KVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRK 117
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S + +H V + D V N+L+ +Y + A +F + +DV S +L++
Sbjct: 118 DLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLN 177
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNI 244
G++K D+ AR++FD MP R++VSW ++ GY Q + ++LF M + P I
Sbjct: 178 GFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVI 237
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ LS CA +G + G ++H Y+ + +D ++ L+D YAK G + A++IF+
Sbjct: 238 TIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEM 297
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++++F+W M+ GLA+HG G +L FS M ++ + P+ VT+L L CSHAGLV E R
Sbjct: 298 PKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGR 357
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
LF +M +G+ +++HYGCM DLLGRAGL+ EA E+I+ MP+ D +W LL C +
Sbjct: 358 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLV 417
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGN+ +AE A + +++L+P+D GVY +L ++Y +A RWED +K R+++ ++KK GCS
Sbjct: 418 HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCS 477
Query: 485 LIQLNG 490
+++NG
Sbjct: 478 WVEVNG 483
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 284/542 (52%), Gaps = 75/542 (13%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + K+ +QIH + GLL L A K + S D + +A+S+F
Sbjct: 69 CGSTKEFNQIHTQLIVSGLL--------QQPLAAGRAVKTLCS----FPDSVQHAVSLFE 116
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAV-VLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ P F NTI+R + + P A+ + QM + P+ Y+FP L++ C ++ S
Sbjct: 117 GLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIG 176
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ---------------------- 166
+ IH+++LK GF D+FV NSL+H+Y V R+ DA+
Sbjct: 177 DGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYV 236
Query: 167 ---------ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
ELF+E+ RD+ S N++I GYV GD+ A LF++MPFRD VSW ++ G
Sbjct: 237 KNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDG 296
Query: 218 YAQSDQCEEAIQLF----------CNMM--------DLD------------IKPDNIALV 247
YAQ E A +LF N+M D D P+ LV
Sbjct: 297 YAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLV 356
Query: 248 SALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S L+ACA LG L++GK IH YI+ N+ I D LST L+ YAKCG ++ A ++F+
Sbjct: 357 SVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSN 416
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+++ +WN+M++G MHG +L F M + P+ T + L C+H+G++ E
Sbjct: 417 RSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWY 476
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
FD M Y + +++HYGCM DLLGRAGL+++ E+I+KMPM G +W LL CR H
Sbjct: 477 FDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHS 536
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N E+AE A+ +++L+P D G Y +L+++YA +W+DV +R+ + + K G S +
Sbjct: 537 NSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWV 596
Query: 487 QL 488
+
Sbjct: 597 HI 598
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/496 (36%), Positives = 282/496 (56%), Gaps = 30/496 (6%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA--LSIFN 69
T++Q+ Q HA GL L +L + KP D YA L++F
Sbjct: 44 TVRQVQQAHARLAVLGLAASRAMPHLLAVLPRLLPDKPRHRGDDGGGDGDHYAYPLALFR 103
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL----------- 118
S F+ N ++R + PL + LFS+ R + +SF FLL
Sbjct: 104 RANSTSAFASNNLLR---VLPHPL-PLTLFSRFRR----RNPHSFTFLLASISNHLNAAG 155
Query: 119 ---RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LY 174
ACS L SH +H+ +K G D+FV N+L+H Y V + + +FDE+
Sbjct: 156 PSASACSFLGSH-----VHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRV 210
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDV++ N ++ GYV+AG + AR++FD MP RD +SW TLV GY + ++ E A+ +F NM
Sbjct: 211 RDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM 270
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
++ ++P+ A+V+ALSA ARLG LE GK +H ++ + + V + LVD YAKCG +
Sbjct: 271 VEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCV 330
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A E+F+ + +++F WNAM+ GLA HGLGR ++ F R I + P VT +G L GC
Sbjct: 331 AVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGC 390
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
S +GLV E R+ F + Y + E++HYGCM DLLGRAGL+ EA+E+I+ M + D +
Sbjct: 391 SRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVL 450
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W +L C+ HG V++ + +++L P G Y +L+ +YA A++W++V ++R+ + +
Sbjct: 451 WGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSS 510
Query: 475 GKIKKNAGCSLIQLNG 490
K+AG SL++ +G
Sbjct: 511 RGTNKSAGWSLMEAHG 526
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 284/482 (58%), Gaps = 16/482 (3%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPIS-SASSPTTDPLSYALSIFNN 70
TI Q+ QI +H + T+ K IS A S L YA +F
Sbjct: 23 TISQLKQIQSHLT-----------VTATLKDPYAAAKIISLHAHSNARSSLFYAERLFLC 71
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
+ STF +NT+++A + + A L+ M + P+ ++F F++RAC + + +
Sbjct: 72 LQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMG 131
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVY--CVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
H QV+K G+ FV N L+H+Y C F L A+ +FD + RDVV+ LI GY+
Sbjct: 132 LCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDL--ARNMFDMSIKRDVVTWTCLISGYL 189
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+G + AR+LFDRMP ++ VSWG L+AGY + +EA+++F +M + + ++V
Sbjct: 190 NSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVG 249
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
AL+ACA LG L+QG+ IH Y++ + + +D L T L+D YAKCG I A +F+ +++
Sbjct: 250 ALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRD 309
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
++ + ++ GLA H ++ F+RM + + P+ VT + L CS G+VDE ++F+
Sbjct: 310 VYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFE 369
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M + Y + +++HYGC+ DLLGRAG IEEA +++++MP+ D + LL CR+HG+V
Sbjct: 370 SMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDV 429
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
++ E + +++ + GGV+ +L+++YA+AD+WED KIR+ ++ I+K GCS I++
Sbjct: 430 QLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSIEV 489
Query: 489 NG 490
NG
Sbjct: 490 NG 491
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 182/496 (36%), Positives = 282/496 (56%), Gaps = 30/496 (6%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA--LSIFN 69
T++Q+ Q HA GL L +L + KP D YA L++F
Sbjct: 44 TVRQVQQAHARLAVLGLAASRAMPHLLAVLPRLLPDKPRHRGDDGGGDGDHYAYPLALFR 103
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL----------- 118
S F+ N ++R + PL + LFS+ R + +SF FLL
Sbjct: 104 RANSTSAFASNNLLR---VLPHPL-PLTLFSRFRR----RNPHSFTFLLASISNHLNAAG 155
Query: 119 ---RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LY 174
ACS L SH +H+ +K G D+FV N+L+H Y V + + +FDE+
Sbjct: 156 PSASACSFLGSH-----VHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRV 210
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDV++ N ++ GYV+AG + AR++FD MP RD +SW TLV GY + ++ E A+ +F NM
Sbjct: 211 RDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM 270
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
++ ++P+ A+V+ALSA ARLG LE GK +H ++ + + V + LVD YAKCG +
Sbjct: 271 VEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCV 330
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A E+F+ + +++F WNAM+ GLA HGLGR ++ F R I + P VT +G L GC
Sbjct: 331 AVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGC 390
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
S +GLV E R+ F + Y + E++HYGCM DLLGRAGL+ EA+E+I+ M + D +
Sbjct: 391 SRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVL 450
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W +L C+ HG V++ + +++L P G Y +L+ +YA A++W++V ++R+ + +
Sbjct: 451 WGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSS 510
Query: 475 GKIKKNAGCSLIQLNG 490
K+AG SL++ +G
Sbjct: 511 RGTNKSAGWSLMEAHG 526
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 283/497 (56%), Gaps = 23/497 (4%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + C +++ Q+HA F K +F P + + ++ S P + L YA
Sbjct: 21 SLFQTCSAPQEVEQLHA-FSLKTAIFNHP----------FVSSRLLALYSDPKINDLGYA 69
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SIF+ I S +NTII+ + + +VLF ++ +P +F + P +++ C++L
Sbjct: 70 RSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDNF-TLPCVIKGCARL 128
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ IH LK+GF DVFV SL+++Y + A+++FD ++ +DVV N+LI
Sbjct: 129 GVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLI 188
Query: 185 DG-----------YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
DG Y+K+GD A +LF +MP D V+W ++AGY + Q +A+++F
Sbjct: 189 DGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFM 248
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M+ L +P + LVS LSA + L L +G+ IH Y+E N +D L T L++ YAKCG
Sbjct: 249 MLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 308
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
I +A+ +F + Q+K + W A++VGL +HG+ +L F M + +KP+ + +G L
Sbjct: 309 IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNA 368
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C+HAGLVD+ R+ FD M + Y + L+HYGC+ D+L RAG +EEA I+ MP+ +
Sbjct: 369 CNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKV 428
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+W LLGG R HG ++I E AA+ V+++ PE G Y +L+++YA + WE V +R +
Sbjct: 429 IWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMY 488
Query: 474 AGKIKKNAGCSLIQLNG 490
+K+ GCS ++ G
Sbjct: 489 KRGFRKDPGCSSVEHKG 505
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 275/522 (52%), Gaps = 46/522 (8%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL N IK C TI ++H + A + + C ++ + A S + +
Sbjct: 41 TLLNRIKNCSTINELHGLCASMIKTNAI--QDCFLVHQFISA-----------SFALNSV 87
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRA 120
Y + F + P+ F YN +I+ P A+ + M S + P Y+F L++A
Sbjct: 88 HYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKA 147
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD---- 176
C+ +C+ L Q +H + K GF +FV +L+ Y L +A+++FDE+ RD
Sbjct: 148 CTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAW 207
Query: 177 ---------------------------VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
+ NT+IDGY + G++ A LF++MP +D +
Sbjct: 208 TAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDII 267
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW T++ Y+Q+ Q ++A+ ++ M I PD + + + SACA +G LE GK IH Y+
Sbjct: 268 SWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYV 327
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
+ +D ++ + LVD YAKCG ++ ++ IF +KNL+ WNA++ GLA+HG +L
Sbjct: 328 MSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKAL 387
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F+ M +I P+GVT + L C+HAGLVDE R F M Y + +++HYGCM D+
Sbjct: 388 RMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDM 447
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
L ++G + EALE+IK M + +W LL GC++HGN EIAE A E +M L+P + G Y
Sbjct: 448 LSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHY 507
Query: 450 KVLADVYANADRWEDVVKIRRSL-DAGKIKKNAGCSLIQLNG 490
+L +YA W +V IR + + G KK G S I+L G
Sbjct: 508 NLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEG 549
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/496 (36%), Positives = 282/496 (56%), Gaps = 30/496 (6%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA--LSIFN 69
T++Q+ Q HA GL L +L + KP D YA L++F
Sbjct: 44 TVRQVQQAHARLAVLGLAASRAMPHLLAVLPRLLPDKPRHRGDDGGGDGDHYAYPLALFR 103
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL----------- 118
S F+ N ++R + PL + LFS+ R + +SF FLL
Sbjct: 104 RANSTSAFASNNLLR---VLPHPL-PLTLFSRFRR----RNPHSFTFLLASISNHLNAAG 155
Query: 119 ---RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LY 174
ACS L SH +H+ +K G D+FV N+L+H Y V + + +FDE+
Sbjct: 156 PSASACSFLGSH-----VHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRV 210
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDV++ N ++ GYV+AG + AR++FD MP RD +SW TLV GY + ++ E A+ +F NM
Sbjct: 211 RDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM 270
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
++ ++P+ A+V+ALSA ARLG LE GK +H ++ + + V + LVD YAKCG +
Sbjct: 271 VEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCV 330
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A E+F+ + +++F WNAM+ GLA HGLGR ++ F R I + P VT +G L GC
Sbjct: 331 AVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGC 390
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
S +GLV E R+ F + Y + E++HYGCM DLLGRAGL+ EA+E+I+ M + D +
Sbjct: 391 SRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVL 450
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W +L C+ HG V++ + +++L P G Y +L+ +YA A++W++V ++R+ + +
Sbjct: 451 WGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSS 510
Query: 475 GKIKKNAGCSLIQLNG 490
K+AG SL++ +G
Sbjct: 511 RGTNKSAGWSLMEAHG 526
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 277/494 (56%), Gaps = 15/494 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TLN+ +K+C+ + Q+ QIHA+ L + L SP I + A T+ P
Sbjct: 13 TLNSLLKKCRALSQLKQIHANLL-QSHLPESPFAIGQLLSLAATSNNP---------SFF 62
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
S+A IF N+ + F YN++IR + L SP A++ + M + + Y+FP L++AC
Sbjct: 63 SHACLIFQNLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKAC 122
Query: 122 SQLCSHS--LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+ L S S + +H+ V+ GF D FV+++L+ Y + + A+ LFD I RDVV
Sbjct: 123 TTLGSSSKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVL 182
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+IDGY K GD+ HAR LF+ MP R+A+SW ++A Y++ +E + LF M +
Sbjct: 183 WTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGT 242
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P+ LVS L+ACA LG L QG +H Y + + L+T LVD Y+KCG + +A+
Sbjct: 243 MPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALS 302
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
F+ K+ WNAM+ G+AM+G SL F++MI +P T + L C+HA L
Sbjct: 303 TFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARL 362
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG---GDVFVWS 416
V E KLF++M S YGV +L+HY C+ DL+ RAG++ EA + I++ G GD VW
Sbjct: 363 VKEGLKLFEQMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWG 422
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
+LG CR +GN+E+ + + + D G + + ++Y A + ++RR +
Sbjct: 423 AMLGACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEAG 482
Query: 477 IKKNAGCSLIQLNG 490
+KK GCS+I+++G
Sbjct: 483 MKKKPGCSIIEVDG 496
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 274/486 (56%), Gaps = 12/486 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+++C +++++ QIH +T GLL H+ +L T SP A
Sbjct: 260 LLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQL------GSPVD-----AQ 308
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+FN+I P S+ +I + S P A +FS + + PD + + AC
Sbjct: 309 KVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRK 368
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S + +H V + D V N+L+ +Y + A +F + +DV S +L++
Sbjct: 369 DLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLN 428
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNI 244
G++K D+ AR++FD MP R++VSW ++ GY Q + ++LF M + P I
Sbjct: 429 GFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVI 488
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ LS CA +G + G ++H Y+ + +D ++ L+D YAK G + A++IF+
Sbjct: 489 TIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEM 548
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++++F+W M+ GLA+HG G +L FS M ++ P+ VT+L L CSHAGLV E R
Sbjct: 549 PKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGR 608
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
LF +M +G+ +++HYGCM DLLGRAGL+ EA E+I+ MP+ D +W LL C +
Sbjct: 609 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLV 668
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGN+ +AE A + +++L+P+D GVY +L ++Y +A RWED +K R+++ ++KK GCS
Sbjct: 669 HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCS 728
Query: 485 LIQLNG 490
+++NG
Sbjct: 729 WVEVNG 734
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 267/475 (56%), Gaps = 39/475 (8%)
Query: 50 ISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP 109
I SAS L YA +F+ IP P N ++R P V L+++M + P
Sbjct: 17 IYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSP 76
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLM--HVYC--------VF 159
D Y+F F+L+ACS+L S H +V++ GF+ + +V N+L+ H C +F
Sbjct: 77 DRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELF 136
Query: 160 H---------------------RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
++ +A LFDE+ Y+D V+ N +I G +K ++ AR+
Sbjct: 137 DDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARE 196
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
LFDR +D V+W +++GY +EA+ +F M D PD + ++S LSACA LG+
Sbjct: 197 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 256
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYINTAIEIFESSQEKNLFTW 312
LE GK +H YI L V S + G L+D YAKCG I+ AIE+F ++++L TW
Sbjct: 257 LETGKRLHIYI-LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTW 315
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
N ++VGLA+H S+ F M ++ P+ VT +G ++ CSH+G VDE RK F M
Sbjct: 316 NTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRD 374
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
+Y + +KHYGCM D+LGRAG +EEA ++ M + + VW LLG C+I+GNVE+ +
Sbjct: 375 MYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGK 434
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
A E ++ ++ ++ G Y +L+++YA+ +W+ V K+R+ D ++KK G SLI+
Sbjct: 435 YANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 489
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 282/499 (56%), Gaps = 28/499 (5%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K C + + + + HA + G F +IL +L +F + SA
Sbjct: 34 LKSCVSFRNLAKTHAQIVVSG--FSQKNYILNHLLSLYISFGSLGSAQK----------- 80
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F +I PST +N II+ HT + ++ LF +M + + +++ FLL AC +
Sbjct: 81 VFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRL 140
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF-----HRLRDAQELFDEILYRDVVSCN 181
+ IH +VL G+ +++V +L+++Y L+ A LFDE+ +VV N
Sbjct: 141 FREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWN 200
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+L+ GYV+ GD AR++FD MP R+ +W +VAG+AQ+ QC+ A+ LF M ++
Sbjct: 201 SLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVEL 260
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELN----QIRVDSFLSTGLVDFYAKCGYINTA 297
D +ALV+ALSACA LG+L GK IH Y+E + V L+ L+ YA CG ++ A
Sbjct: 261 DQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLA 320
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI---EARIKPDGVTILGALVGC 354
++FE ++N +W++++ G A G G ++ F M+ + ++PD +T +GAL C
Sbjct: 321 YKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTAC 380
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
SHAGL+ + +LF M +GV +++HYGCM DLL RAGL+ EAL +I+ MPM + V
Sbjct: 381 SHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAV 440
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHV-MKLKPED--GGVYKVLADVYANADRWEDVVKIRRS 471
W LL GCR+H N EI A+H+ ++ P + G + +LA+VYA RW+D +RR+
Sbjct: 441 WGALLSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRN 500
Query: 472 LDAGKIKKNAGCSLIQLNG 490
+ +KK +G S I++NG
Sbjct: 501 MHDIGVKKPSGRSWIEING 519
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 275/522 (52%), Gaps = 46/522 (8%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL N IK C TI ++H + A + + C ++ + A S + +
Sbjct: 138 TLLNRIKNCSTINELHGLCASMIKTNAI--QDCFLVHQFISA-----------SFALNSV 184
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRA 120
Y + F + P+ F YN +I+ P A+ + M S + P Y+F L++A
Sbjct: 185 HYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKA 244
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD---- 176
C+ +C+ L Q +H + K GF +FV +L+ Y L +A+++FDE+ RD
Sbjct: 245 CTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAW 304
Query: 177 ---------------------------VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
+ NT+IDGY + G++ A LF++MP +D +
Sbjct: 305 TAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDII 364
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW T++ Y+Q+ Q ++A+ ++ M I PD + + + SACA +G LE GK IH Y+
Sbjct: 365 SWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYV 424
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
+ +D ++ + LVD YAKCG ++ ++ IF +KNL+ WNA++ GLA+HG +L
Sbjct: 425 MSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKAL 484
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F+ M +I P+GVT + L C+HAGLVDE R F M Y + +++HYGCM D+
Sbjct: 485 RMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDM 544
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
L ++G + EALE+IK M + +W LL GC++HGN EIAE A E +M L+P + G Y
Sbjct: 545 LSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHY 604
Query: 450 KVLADVYANADRWEDVVKIRRSL-DAGKIKKNAGCSLIQLNG 490
+L +YA W +V IR + + G KK G S I+L G
Sbjct: 605 NLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEG 646
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 265/474 (55%), Gaps = 13/474 (2%)
Query: 17 HQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPST 76
H I H L L +S H + ++A + + A +F+ P
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFA-------------SCGDMENARKVFDESPVRDL 222
Query: 77 FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQ 136
S+N +I + A+ ++ M + + PD + L+ +CS L + + +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
V + G + ++N+LM ++ + +A+ +FD + R +VS T+I GY + G L +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
R+LFD M +D V W ++ G Q+ + ++A+ LF M + KPD I ++ LSAC++L
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 257 GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML 316
G L+ G IHRYIE + ++ L T LVD YAKCG I+ A+ +F Q +N T+ A++
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
GLA+HG ++ YF+ MI+A I PD +T +G L C H G++ R F +M+S + +
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
+ +LKHY M DLLGRAGL+EEA +++ MPM D VW LL GCR+HGNVE+ E AA+
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 582
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++L P D G+Y +L +Y A+ WED + RR ++ ++K GCS I++NG
Sbjct: 583 KLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNG 636
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 206/461 (44%), Gaps = 78/461 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +++CK + + QI A + GL IL + + I+ + + L Y+
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGL-----------ILDPFASSRLIAFCALSESRYLDYS 106
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT---VSIPPDFYSFPFLLRAC 121
+ I I P+ FS+N IR + +P + +L+ QM PD +++P L + C
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L SL I VLKL V N+ +H++ + +A+++FDE RD+VS N
Sbjct: 167 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
LI+GY K G + E+AI ++ M +KP
Sbjct: 227 CLINGYKKIG-------------------------------EAEKAIYVYKLMESEGVKP 255
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D++ ++ +S+C+ LG+L +GK + Y++ N +R+ L L+D ++KCG I+ A IF
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 302 ESSQEKNLFTWNAMLVGLAMHGL-------------------------------GRLSLV 330
++ +++ + +W M+ G A GL G+ +L
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M + KPD +T++ L CS G +D + +E Y +S + + D+
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMY 434
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G I EAL + + + ++ ++GG +HG+ A
Sbjct: 435 AKCGNISEALSVFHGIQT-RNSLTYTAIIGGLALHGDASTA 474
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/488 (37%), Positives = 286/488 (58%), Gaps = 18/488 (3%)
Query: 9 RCKT---IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
RC T ++Q+ +I A + + + P I K I +SS L +++
Sbjct: 30 RCATQLSMRQLFEIQAQIIASPIPSIDP---------NIIAVKFIGVSSSHGN--LRHSV 78
Query: 66 SIFNN-IPYPSTFSYNTIIRAHTLFSSPLNAVVLFS-QMRTVSIP-PDFYSFPFLLRACS 122
IFN+ + +P+ F+YN +++A + ++ + F+ Q+ + P PD Y+F +L+AC+
Sbjct: 79 LIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACA 138
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L Q +H V K G ++FV NSL+ +Y AQ+LFDE++ RDVVS NT
Sbjct: 139 GLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNT 198
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKP 241
LI GY +G + AR +FD M ++ VSW T+++GYA++++ +AI+LF M + + P
Sbjct: 199 LISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAP 258
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+++ LVS LSACA LG L+ GK IHR+I N+I V FL L D YAKCG + A +F
Sbjct: 259 NDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVF 318
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
E+++ +W+ +++GLAM+G + +F+ MIE ++P+ ++ +G L C+HAGLVD
Sbjct: 319 HEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVD 378
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ + FD M VYG++ +++HYGC+ DLL RAG +++A +I MPM +V VW LLGG
Sbjct: 379 KGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRI+ + E E +++L G LA+VYA+ R +D R + K K
Sbjct: 439 CRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTP 498
Query: 482 GCSLIQLN 489
GCS I++N
Sbjct: 499 GCSWIEIN 506
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 290/526 (55%), Gaps = 61/526 (11%)
Query: 9 RCKT---IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
RC T ++Q+ +I A + + + P I K I +SS L +++
Sbjct: 30 RCATQLSMRQLFEIQAQIIASPIPSIDP---------NIIAVKFIGVSSSHGN--LRHSV 78
Query: 66 SIFNN-IPYPSTFSYNTIIRAHTLFSSPLNAVVLFS-QMRTVSIP-PDFYSFPFLLRACS 122
IFN+ + +P+ F+YN +++A + ++ + F+ Q+ + P PD Y+F +L+AC+
Sbjct: 79 LIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACA 138
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY------CVFHRLRDAQELFDEILYRD 176
L Q +H V K G ++FV NSL+ +Y C+ AQ+LFDE++ RD
Sbjct: 139 GLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCI------AQKLFDEMVVRD 192
Query: 177 VVSCNTLIDGY-------------------------------VKAGDLAHARQLFDRMPF 205
VVS NTLI GY + G+L ARQLF+ MP
Sbjct: 193 VVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPM 252
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIALVSALSACARLGELEQGKN 264
R+ VSW ++AGYAQ+++ +AI+LF M + + P+++ LVS LSACA LG L+ GK
Sbjct: 253 RNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKW 312
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
IHR+I N+I V FL L D YAKCG + A +F E+++ +W+ +++GLAM+G
Sbjct: 313 IHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGY 372
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
+ +F+ MIE ++P+ ++ +G L C+HAGLVD+ + FD M VYG++ +++HYG
Sbjct: 373 ANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYG 432
Query: 385 CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
C+ DLL RAG +++A +I MPM +V VW LLGGCRI+ + E E +++L
Sbjct: 433 CVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSN 492
Query: 445 DGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
G LA+VYA+ R +D R + K K GCS I++N
Sbjct: 493 HSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINN 538
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/385 (40%), Positives = 246/385 (63%), Gaps = 2/385 (0%)
Query: 108 PPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
PP+ +F FL AC+ S + IH+ +K GF DV+ L +L+ +Y L A++
Sbjct: 7 PPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQ 66
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
+FDE+ RD+ + N+LI GY ++GD+ A +LF MP R VSW T+++GY+Q+ +A
Sbjct: 67 VFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKA 126
Query: 228 IQLFCNM-MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
+++F M D +++P+ + + S SACA+LG LE G+ I Y N + + ++S L++
Sbjct: 127 LEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLE 186
Query: 287 FYAKCGYINTAIEIF-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
YA+CG I+ A +F E + +NL +WN+M++GLA+HG +L + +M+ I+PD V
Sbjct: 187 MYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDV 246
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T +G ++ C+H GLV + +LF ME+ + + +L+HYGCM DLLGRAG ++EA +++K
Sbjct: 247 TFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKS 306
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
MPM D +W LLG C H NVE AE AAE + +++P + G Y +L ++YA+A RW+ V
Sbjct: 307 MPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGV 366
Query: 466 VKIRRSLDAGKIKKNAGCSLIQLNG 490
K+R+ + G+I K AG S+I+ G
Sbjct: 367 AKLRKLMKGGQITKAAGYSVIEGEG 391
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 134/326 (41%), Gaps = 53/326 (16%)
Query: 19 IHAHFLTKGLLF--------LSPCHILTTILYAITTFKPISSASSPTTDPL--------- 61
IH HF+ G F + L ++ A F ++ PT + L
Sbjct: 32 IHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIAGYSRSGD 91
Query: 62 -SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
AL +F +P S S+ T+I ++ A+ +F +M + + P+ + +
Sbjct: 92 MEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTIASVFS 151
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVV 178
AC++L + + + I S G + +++V N+L+ +Y ++ A+ +F+EI R++
Sbjct: 152 ACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLC 211
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N+++ G H R EA+QL+ M+
Sbjct: 212 SWNSMMMGLA-----VHGRS--------------------------NEALQLYDQMLGEG 240
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTA 297
I+PD++ V + AC G + +G + + +E N V G +VD + G + A
Sbjct: 241 IEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEA 300
Query: 298 IEIFESSQEK-NLFTWNAMLVGLAMH 322
++ +S K + W +L + H
Sbjct: 301 YDLVKSMPMKPDSVIWGTLLGACSFH 326
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 263/463 (56%), Gaps = 36/463 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
++ A S F N+ P+ +N +IR H +S A+V + M ++ P YSF L+
Sbjct: 26 INLAASAFANVQNPNVLVFNALIRGCVHCCYSE--QALVHYMHMLRNNVMPTSYSFSSLI 83
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF------------------- 159
+AC+ L + + +H V K GF VFV +L+ Y F
Sbjct: 84 KACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVF 143
Query: 160 -------HRLRD-----AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRD 207
+RD A LFDE+ ++V + N +IDGY K G+ A LF++MP RD
Sbjct: 144 AWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARD 203
Query: 208 AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHR 267
+SW T++ Y+++ + +E I LF +++D + PD + + + +SACA LG L GK +H
Sbjct: 204 IISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHL 263
Query: 268 YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRL 327
Y+ L +D ++ + L+D YAKCG I+ A+ +F Q KNLF WN ++ GLA HG
Sbjct: 264 YLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEE 323
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
+L F M RI+P+ VT + L C+HAG ++E R+ F M Y ++ +++HYGCM
Sbjct: 324 ALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMV 383
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGG 447
DLL +AGL+E+ALEMI+ M + + F+W LL GC++H N+EIA A +++M L+P + G
Sbjct: 384 DLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSG 443
Query: 448 VYKVLADVYANADRWEDVVKIRRSL-DAGKIKKNAGCSLIQLN 489
Y +L ++YA +RW +V KIR ++ D G K+ G S +++N
Sbjct: 444 HYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEIN 486
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 290/533 (54%), Gaps = 66/533 (12%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGL----LFLSPCHILTTILYAITTFKPISSASSPTTDP 60
+ +++CK++ Q+ QIH+H + GL LF + + I+ + +
Sbjct: 12 SLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRN---------------RVIAFCCAHESGN 56
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA +F+ IP+PS F +NT+I+ ++ S P N V ++ M T +I PD ++FPF L+
Sbjct: 57 MNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKG 116
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ + + + + +K GF ++FV + +H++ + + A ++FD +VV+
Sbjct: 117 FTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTW 176
Query: 181 NTLIDGYVKA-------------------------------------------GDLAHAR 197
N ++ GY + G++ A+
Sbjct: 177 NIMLSGYNRVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQ 236
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
+FD M RD VSW ++ GY + + A+ LF M ++KPD +VS L ACA LG
Sbjct: 237 GVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLG 296
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
LE G+ + I+ N + DSF+ LVD Y KCG + A ++F+ +K+ FTW M+V
Sbjct: 297 ALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIV 356
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GLA++G G +L FS MIEA + PD +T +G L C +VD+ + F M +G+
Sbjct: 357 GLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIK 412
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+ HYGCM DLLG G +EEALE+I MP+ + VW LG CR+H NV++A+ AA+
Sbjct: 413 PTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQ 472
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++L+PE+G VY +L ++YA + +WE++ ++R+ + IKK GCSL++LNG
Sbjct: 473 ILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNG 525
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 248/427 (58%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN + S++ +I + A+V+F +M + D +L AC+
Sbjct: 257 AWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAH 316
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + IH V+++G V + N+L+H+Y + DAQ+LF+ D +S N++
Sbjct: 317 LSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSM 376
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G +K G + AR LFD MP +D VSW +++GYAQ D E + LF M I+PD
Sbjct: 377 ISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDE 436
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVS +SAC L L+QGK +H YI N ++V+ L T L+D Y KCG + A+E+F
Sbjct: 437 TILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNG 496
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+EK + +WNA+++GLA++GL SL FS M + P+ +T +G L C H GLVDE
Sbjct: 497 MEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEG 556
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R F M +G+ +KHYGCM DLLGRAGL+ EA ++I+ MPM DV W LLG C+
Sbjct: 557 RCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACK 616
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HG+ E+ E +++L+P+ G + +L++++A+ WEDV+++R + + K GC
Sbjct: 617 KHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGC 676
Query: 484 SLIQLNG 490
SLI+ NG
Sbjct: 677 SLIEANG 683
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 230/489 (47%), Gaps = 75/489 (15%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + C +KQ ++I + + G F+S + +L S SP L
Sbjct: 44 LETHLHNCHNLKQFNRILSQMILTG--FISDTFAASRLLKF--------STDSPFIG-LD 92
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
Y+L IF+ I + F +NT++RA+ +S A++L+ M ++ PD Y++P +++AC+
Sbjct: 93 YSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA 152
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ IH VLK+GF DV+V N+L+++Y V +RDA++LFDE D VS N+
Sbjct: 153 VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNS 212
Query: 183 LIDGYVKAGDLAHARQLFDRMPFR-------------------------------DAVSW 211
++ GYVK GD+ A+ +FD+MP R D VSW
Sbjct: 213 ILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSW 272
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH----- 266
L++GY Q+ EEA+ +F M ++ D + +VS LSACA L ++ GK IH
Sbjct: 273 SALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIR 332
Query: 267 ----RYIELNQIRVDSFLSTG----------------------LVDFYAKCGYINTAIEI 300
Y+ L + + +G ++ KCG + A +
Sbjct: 333 MGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARAL 392
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ EK++ +W+A++ G A H +L F M +I+PD ++ + C+H +
Sbjct: 393 FDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAAL 452
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + + + G+ + + D+ + G +E ALE+ M G V W+ L+
Sbjct: 453 DQGKWVHAYIRK-NGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKG-VSSWNALII 510
Query: 421 GCRIHGNVE 429
G ++G VE
Sbjct: 511 GLAVNGLVE 519
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 259/427 (60%), Gaps = 5/427 (1%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLC 125
+F+ +P S+N +I + +A+ +F +M+ S + PD + L AC+ L
Sbjct: 194 LFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALK 253
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
L + IH V + + N+L+ +YC L A+ +F+E+ ++V+ T++
Sbjct: 254 RLELGKKIHHYV-RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVS 312
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY G+L AR+LF+ P RD V W ++ GY Q ++ +EA+ LF M +KPD
Sbjct: 313 GYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFI 372
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+VS L+ CA+ G +EQGK IH +I+ N+I +D+ + T L++ YAKCG+I A+EIF +
Sbjct: 373 VVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLR 432
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+ +W +++ GLAM+G +L FS+M +A ++PD +T +G L CSH GLV+E RK
Sbjct: 433 VKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRK 492
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD---VFVWSGLLGGC 422
F+ M Y + +++HYGC+ DLLGRAGL+ EA E+IKK+P V ++ LL C
Sbjct: 493 FFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSAC 552
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RI+GNVE+ E A+ ++K + D V+ +LA++YA ADRWEDV K+RR + +KK G
Sbjct: 553 RIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPG 612
Query: 483 CSLIQLN 489
CS I+++
Sbjct: 613 CSSIEVD 619
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 202/468 (43%), Gaps = 95/468 (20%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+++K CK++ + QIHA GL H L + F + P L+YA
Sbjct: 42 SYLKSCKSMTHLKQIHAQIFRVGL------HQDIVSLNKLMAF-----CTDPFNGNLNYA 90
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F I YP YN II+A + +VLFS++R + PD +++PF+ +A L
Sbjct: 91 EKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYL 150
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S A+ + V K G D +V NSL+ +Y + LFDE+ RDV+S N +I
Sbjct: 151 GEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMI 210
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDN 243
GYVK + E+AI +FC M + + PD
Sbjct: 211 SGYVKC-------------------------------RRFEDAINVFCRMQEESGLMPDE 239
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+VS LSAC L LE GK IH Y+ N ++ + L+D Y KCG ++ A +FE
Sbjct: 240 ATVVSTLSACTALKRLELGKKIHHYVRDN-VKFTPIIGNALLDMYCKCGCLSIARAVFEE 298
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLS-----------------------LVYFSRMIEA-- 338
KN+ W M+ G A G L V F+R EA
Sbjct: 299 MPSKNVICWTTMVSGYA--NCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVA 356
Query: 339 --------RIKPDGVTILGALVGCSHAGLVDEAR---KLFDE----MESVYGVSKELKHY 383
++KPD ++ L GC+ G +++ + + DE +++V G +
Sbjct: 357 LFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTA------ 410
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ ++ + G IE+ALE+ + + D W+ ++ G ++G A
Sbjct: 411 --LIEMYAKCGFIEKALEIFYGLRV-KDTASWTSIICGLAMNGKTSKA 455
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 34/250 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F P + +I + F+ AV LF +M+ + PD + LL
Sbjct: 320 LEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTG 379
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE-ILYRDVVS 179
C+Q + + IH E DE + D V
Sbjct: 380 CAQTGAIEQGKWIH--------------------------------EFIDENRIPIDAVV 407
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
LI+ Y K G + A ++F + +D SW +++ G A + + +A++LF M +
Sbjct: 408 GTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGV 467
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAI 298
+PD+I + LSAC+ G +E+G+ + + QI+ LVD + G +N A
Sbjct: 468 RPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAE 527
Query: 299 EIFESSQEKN 308
E+ + ++N
Sbjct: 528 ELIKKIPDEN 537
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/413 (18%), Positives = 169/413 (40%), Gaps = 54/413 (13%)
Query: 74 PSTFSYNTIIRAHTL-----FSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
P F +I H L FS+ N SQ +S L++C S +
Sbjct: 5 PRNFLLLELISRHGLSRRSKFSTFTNPTTGLSQQSCIS----------YLKSCK---SMT 51
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ IH+Q+ ++G D+ LN LM +C + F+
Sbjct: 52 HLKQIHAQIFRVGLHQDIVSLNKLM-AFCT--------DPFN------------------ 84
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
G+L +A ++F + + + + ++ +A+ + + LF + + + PDN
Sbjct: 85 --GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPF 142
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
A LGE+ + + + + + D+++ L+D YA+ + +F+ +++
Sbjct: 143 VFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRD 202
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +WN M+ G ++ F RM E+ + PD T++ L C+ ++ +K+
Sbjct: 203 VISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIH 262
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ + + + + D+ + G + A + ++MP +V W+ ++ G + N
Sbjct: 263 HYVRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMP-SKNVICWTTMVSG---YAN 316
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
E A E D ++ + + Y +R+++ V + R + K+K +
Sbjct: 317 CGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPD 369
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 274/521 (52%), Gaps = 64/521 (12%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI--P 72
+ ++HA L +GL YA+ P S +F+ I P
Sbjct: 367 HVRELHAQVLKQGLHLNPRAAARLVSAYALLRLLPSSR-------------RVFDAIRDP 413
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+ F NT++RA+ L +P +A+ FS M D +++ FL++A S + +
Sbjct: 414 HADAFLANTMLRAYALGGAPRDALAAFSAMPRR----DSFTYSFLIKALSA-AGVAPVRA 468
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+HS V+KLG + D FV N+L+ Y DA+++FDE+ RDVVS NT + V+ G+
Sbjct: 469 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGE 528
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF------------------CNM 234
LA AR+LFD MP +D VSW T++ GY ++ + E A +LF C
Sbjct: 529 LAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKK 588
Query: 235 MDLD-------------------------IKPDNIALVSALSACARLGELEQGKNIHRYI 269
DL+ ++ D A+VS L+ACA G L GK IHRY+
Sbjct: 589 GDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYV 648
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLS 328
+ + + L+D + KCG +N A +F++ +K+ +WN+++ G AMHG G +
Sbjct: 649 RKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKA 708
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
L F++M + PD VT++ L C+H G VDE R+ F ME YG+ +++HYGCM D
Sbjct: 709 LELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMID 768
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
LLGR GLI+EA+++IK MP + +W LL CR+H NVE AE A + KL+P + G
Sbjct: 769 LLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGN 828
Query: 449 YKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
Y VL+++YA A +W D+ K R + +K AG S ++LN
Sbjct: 829 YAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELN 869
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 275/549 (50%), Gaps = 85/549 (15%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+ Q+ QIHA L GL F P T K ++ S + L YA +F+ IP
Sbjct: 1 MSQLKQIHAQMLRTGLFF-DP----------FTASKIVAFCSLQESGSLQYARLVFSQIP 49
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P++++ N+IIR T + A++ + +M + PD Y+FP L ++C + S +
Sbjct: 50 NPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCR---NSSEGKQ 106
Query: 133 IHSQVLKLGFICDVFVLNSL--MHVYC--------VFHRLRD------------------ 164
IH KLGF D + N+L M+ C VF ++ D
Sbjct: 107 IHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQ 166
Query: 165 ---AQELFDEILY----------------------------------------RDVVSCN 181
A LFD ++ R VV
Sbjct: 167 PNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNT 226
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
L+D Y K G + AR LFD+ ++ SW ++ G+ + EEA+ LF M IK
Sbjct: 227 VLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKG 286
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D + + S L AC LG LE GK +H YI+ +I VD L T LVD YAKCG I TAI++F
Sbjct: 287 DKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVF 346
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
EK++ TW A+++GLAM G +L YF M +KPD +T +G L CSHAG VD
Sbjct: 347 HEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVD 406
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E F+ M YG+ ++HYG + D+LGRAG I EA E+IK MPM D FV GLLG
Sbjct: 407 EGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGA 466
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRIHGN+E AE AA+ ++++ P G Y +L+++Y ++ +WE+ + R + ++K
Sbjct: 467 CRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPP 526
Query: 482 GCSLIQLNG 490
GCS I+++G
Sbjct: 527 GCSQIEVHG 535
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 280/520 (53%), Gaps = 48/520 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I + ++ QIH L C++ ++ +T F ISS SS + + YA
Sbjct: 47 DLIHASNSTHKLRQIHGQ--------LYRCNVFSSS-RVVTQF--ISSCSS--LNSVDYA 93
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+SIF +++ +N +IR S +++ F M I PD +FPF+L++ + L
Sbjct: 94 ISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAAL 153
Query: 125 CSHSLAQTIHSQVLKLGFICDVFV-----------------------------------L 149
+ + + +H +LK G D FV
Sbjct: 154 SNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIW 213
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
N L+H YC L A ELFD + +D S N+LI+G++K GD+ A++LF +MP ++ V
Sbjct: 214 NVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVV 273
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW T+V G++Q+ E+A++ F M++ +P++ +VSALSACA++G L+ G IH Y+
Sbjct: 274 SWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYL 333
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
N +++ + T LVD YAKCG I A ++F ++EK L W+ M+ G A+HG R +L
Sbjct: 334 SGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKAL 393
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
YF M KPD V L L CSH+G V+E K FD M Y + +KHY + D+
Sbjct: 394 QYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDM 453
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
LGRAG ++EAL+ I+ MP+ D VW L CR H NVE+AE A++ +++L+P+ G Y
Sbjct: 454 LGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSY 513
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
L++ YA+ RW+D ++R S+ K+ G S I+++
Sbjct: 514 VFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVD 553
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 250/433 (57%), Gaps = 2/433 (0%)
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT--VSIPPDFYSFPFL 117
P+++A +F+ P S+NT+I + P A+ LF ++ ++ PD +
Sbjct: 171 PMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGA 230
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ C+Q+ L + +H V G C V ++N++M +Y L A +F+ I R
Sbjct: 231 VSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTA 290
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VS T+I G+ + G + AR LFD MP RD W L+AGY Q+ Q +EAI LF M
Sbjct: 291 VSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKS 350
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ P+ I +V+ LSAC++LG LE G +H YI+ +++ + L T LVD YAKCG I A
Sbjct: 351 KVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKA 410
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
I +F +N TW +M+ GLA HG ++ YF RMI+ ++PD +T +G L C HA
Sbjct: 411 ICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHA 470
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLV+ R+ F M + Y + +++KHY CM DLLGRAG ++EA +++ MPM D VW
Sbjct: 471 GLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGA 530
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
L CR+HGN+ + E AA +++L P D G+Y +LA++YA A+ + K+R + +
Sbjct: 531 LFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGV 590
Query: 478 KKNAGCSLIQLNG 490
+K GCS I+LNG
Sbjct: 591 EKVPGCSCIELNG 603
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 209/456 (45%), Gaps = 82/456 (17%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP--S 75
++HAH L GLL H + + + S +SP PL +AL+I ++P P S
Sbjct: 26 KLHAHHLVSGLL---SSHSTSPFIDRLVAAFAHSDPASPR--PLLHALAILASLPSPPDS 80
Query: 76 TFSYNTIIRAHTLFSS---------PLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
F YN RA +L PL +L S S PD +FPFL++AC++L
Sbjct: 81 AFPYNAAFRALSLCPHQHLVDRHCLPLYRALLHSG----SARPDHLTFPFLIKACARLQY 136
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S + V KLGF DVFV+N+ MH + V + A+ LFDE RDVVS NTLI G
Sbjct: 137 RSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGG 196
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YV++G A +LF W G A ++PD + +
Sbjct: 197 YVRSGLPREALELF----------WRLAEDGNA-------------------VRPDEVTV 227
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE---- 302
+ A+S CA++G+LE GK +H +++ +R L ++D Y KCG + A +FE
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISN 287
Query: 303 ---------------------------SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
E+++F WNA++ G + G+ ++ F M
Sbjct: 288 RTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEM 347
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
++++ P+ +T++ L CS G ++ + ++ + + + + D+ + G
Sbjct: 348 QKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HKLHLSVALGTSLVDMYAKCGN 406
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
I++A+ + ++P+ + W+ ++ G HG+ + A
Sbjct: 407 IKKAICVFNEIPV-QNALTWTSMICGLANHGHADEA 441
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 181/490 (36%), Positives = 275/490 (56%), Gaps = 48/490 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+ C ++Q IHA F+ GL H+ + + +F +S++ S LSYA I
Sbjct: 12 QSCSNMRQFKAIHALFIVNGL------HLNNYAISKLISFCALSNSGS-----LSYASLI 60
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCS 126
F+ I P+ F+YNT+IRA++ S+P A+ F M ++ PD ++FPF++ AC+
Sbjct: 61 FSQIQNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLW 120
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L + IH+ VLK G V +S HV L+
Sbjct: 121 MLLGKQIHNWVLKNG------VASSDRHVQ------------------------TALVRF 150
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y + + AR+LFD +P D V W L+ GY + EA+ F NM+ ++PD L
Sbjct: 151 YAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCL 210
Query: 247 VSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+AL CA+LG L+QGK IH Y+ + + D F+ T LVD YAKCG I+ ++E+FE
Sbjct: 211 TTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMT 270
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVDEAR 364
++N+F+W+AM+ G A+HG R ++ RM +E ++PDGV +LG ++ C+HAGL +E +
Sbjct: 271 KRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQ 330
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
L + ME+ YG+ + +HY CM DLL RAG ++EAL++I++MPM VW LL GCR
Sbjct: 331 FLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRT 390
Query: 425 HGNVEIAEAAAEHVMKLKPEDG----GVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
H NV++AE AA ++ + DG G Y L+++Y A + ED +IRR + +IK
Sbjct: 391 HNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTK 450
Query: 481 AGCSLIQLNG 490
GCSLI++ G
Sbjct: 451 PGCSLIEVEG 460
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/493 (35%), Positives = 278/493 (56%), Gaps = 20/493 (4%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
F+ R IK Q HA + GL P L + A+ ++ L A
Sbjct: 85 QFLTRHNFIKLGQQAHAQIVLHGL---QPNAFLAAKMVAMYA----------SSGDLDSA 131
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVL---FSQMRTVSIPPDFYSFPFLLRAC 121
+ +F+ I PS+ YN+IIRA+T +++M + + D ++ PF+L++C
Sbjct: 132 VVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSC 191
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L + + +H Q L++G D +V SL+ +Y + DA++LFD+++ RD+ S N
Sbjct: 192 ADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWN 251
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD--LDI 239
LI GY+K G++ A LF+RM R+ VSW +++GY Q+ E+A+ LF M+ ++
Sbjct: 252 ALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEM 311
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KP+ + +VS L ACA+ LE+G+ IH + + ++S + T L YAKC + A
Sbjct: 312 KPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARC 371
Query: 300 IFE--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
F+ + KNL WN M+ A HG G ++ F M+ A ++PD VT +G L GCSH+
Sbjct: 372 CFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHS 431
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GL+D F++M +++ V ++HY C+ DLLGRAG + EA E+I +MPM VW
Sbjct: 432 GLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGA 491
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LL CR H N+EIAE AA + L+P++ G Y +L+++YA A WE+V K+R L +
Sbjct: 492 LLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGM 551
Query: 478 KKNAGCSLIQLNG 490
KK+ GCS I++NG
Sbjct: 552 KKSPGCSWIEING 564
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 247/413 (59%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
S+N++I + P A+ ++ QM T + PD + ++ AC+QL S L + IH +
Sbjct: 222 SWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYI 281
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+ G + ++N+LM +Y L + LFD + + VVS T+I GY K G L A
Sbjct: 282 EESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAG 341
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
+LF MP ++ V+W ++ Q++ EA++LF M ++KPD + ++ LSAC++LG
Sbjct: 342 KLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLG 401
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
L+ G H YI+ + + +D L T L+D YAKCG + A+++F +N TW A++
Sbjct: 402 ALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIG 461
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GLA++G ++ YFS+MI++ + PD +T LG L C H GLV+E RK FD+M+S + +S
Sbjct: 462 GLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLS 521
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+ KHY CM +LLGRAGL+EEA E+IK MPM D VW L C IH N+ I E AA
Sbjct: 522 PQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASK 581
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++ L P D G+Y +LA++Y A +WE+ IR+ + ++K G S I++NG
Sbjct: 582 LLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNG 634
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 216/459 (47%), Gaps = 76/459 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ CK+ Q+ QI A + GL IL + + IS + + L Y
Sbjct: 58 SLLENCKSFSQLKQIQAQMILTGL-----------ILDGFASSRLISFCAISESRNLDYC 106
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT-VSIPPDFYSFPFLLRACSQ 123
+ I NN+ P+ FS+N +IR +P +VL+ +M T PD Y++ FL + C+
Sbjct: 107 IKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCAN 166
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + I QVLK+GF D+++ N ++H+ A ++FDE RD+VS N+L
Sbjct: 167 LVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSL 226
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+GYV+ R P EA+ ++ M+ +KPD
Sbjct: 227 INGYVRR-----------RQP--------------------REAMGIYQQMITEHVKPDE 255
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++ +SACA+L L+ G+ IHRYIE + + + L L+D Y KCG + +F++
Sbjct: 256 VTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDN 315
Query: 304 SQEKNLFTWNAMLVGLAMHGL----GRL---------------------------SLVYF 332
++K + +W M+VG A +GL G+L +L F
Sbjct: 316 MRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELF 375
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
M + +KPD VT+L L CS G +D + ++ + +S ++ + D+ +
Sbjct: 376 REMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKK-HNLSLDVALGTALIDMYAK 434
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G + +AL++ +MP + W+ ++GG ++GNV A
Sbjct: 435 CGNMTKALQVFNEMPR-RNSLTWTAIIGGLALYGNVNDA 472
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 43/269 (15%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+++P + ++N +I + + A+ LF +M+ ++ PD + L A
Sbjct: 337 LDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSA 396
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CSQL + H+ + K DV + +L+
Sbjct: 397 CSQLGALDTGMWTHNYIKKHNLSLDVALGTALI--------------------------- 429
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
D Y K G++ A Q+F+ MP R++++W ++ G A +AI F M+D +
Sbjct: 430 ----DMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLM 485
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS------TGLVDFYAKCGYI 294
PD I + L+AC G +E+G+ +Y + + R + LS + +V+ + G +
Sbjct: 486 PDEITFLGVLTACCHGGLVEEGR---KYFDQMKSRFN--LSPQPKHYSCMVNLLGRAGLL 540
Query: 295 NTAIEIFES-SQEKNLFTWNAMLVGLAMH 322
A E+ ++ E + W A+ +H
Sbjct: 541 EEAEELIKTMPMEADAMVWGALFFACGIH 569
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 248/430 (57%), Gaps = 15/430 (3%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ S+N++I + A+ + +M+ I PD + ++ +
Sbjct: 130 LDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSS 189
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL L + H + + G V + N+LM +Y L A++LFD + + +VS
Sbjct: 190 CAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSW 249
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
T+ LFD MP +D V W ++ GY +++ +EA+ LF M ++I
Sbjct: 250 TTM---------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNIN 294
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + +VS LSAC++LG L+ G IH YIE +++ ++ L T L+D YAKCG I AI++
Sbjct: 295 PDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQV 354
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +N TW A++ GLA+HG ++ YFS MI+ + PD VT LG L C H GLV
Sbjct: 355 FQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLV 414
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E RK F +M S + +S +LKHY CM DLLGRAGL+EEA E+IK MP+ D VW L
Sbjct: 415 EEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFF 474
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHGNV + E AA ++++ P D G+Y +LA++Y A+ W++ K R+ + ++K
Sbjct: 475 ACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKT 534
Query: 481 AGCSLIQLNG 490
GCS I++NG
Sbjct: 535 PGCSSIEVNG 544
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 192/390 (49%), Gaps = 50/390 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ-MRTVSIPPDFYSFPFLLR 119
L Y +I N P+TFS+N IR +P AVVL+ + ++ PD Y++P L +
Sbjct: 28 LDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFK 87
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC++L + I VL LGF D+FV N+++H+ +VS
Sbjct: 88 ACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHL---------------------LVS 126
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
C GDL AR++FD+ RD VSW +++ GY + EA+ + M I
Sbjct: 127 C----------GDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGI 176
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD + ++ +S+CA+L +L+ G+ H YIE N +++ L+ L+D Y KCG + +A +
Sbjct: 177 KPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARK 236
Query: 300 IFESSQEKNLFT----------------WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+F+S K + + WNAM+ G G+ +L F+ M I PD
Sbjct: 237 LFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPD 296
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
VT++ L CS G +D + +E + +S + + D+ + G I +A+++
Sbjct: 297 EVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAKCGKITKAIQVF 355
Query: 404 KKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+++P G + W+ ++ G +HGN A A
Sbjct: 356 QELP-GRNSLTWTAIISGLALHGNAHGAIA 384
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 281/492 (57%), Gaps = 18/492 (3%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L++ I CK+I QI Q HA+ +T + T + A K ++ AS L+
Sbjct: 182 LSSLIDLCKSINQIKQTHANLITTAQI--------TLPVIANKFLKNVALAS------LT 227
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFS-SPLNAVVLF-SQMRTVSIPPDFYSFPFLLRA 120
YA +F+ IP P F YNT+I++H++ S L+++ +F S +R P+ YSF F A
Sbjct: 228 YAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGA 287
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + + + +K+G +VFV+N+L+ ++ + R+ DA+ +FD + RD S
Sbjct: 288 CGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSW 347
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT+I YV +G++ A++LFD M RD VSW T++AGY Q EA+ F M+ ++K
Sbjct: 348 NTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVK 407
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ +VSAL+AC+ L L+QGK IH YI + I+++ L L+D YAKCG I++A +
Sbjct: 408 PNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSV 467
Query: 301 F-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
F E ++ ++ WNAM+ G AMHG ++ F +M ++ P+ VT + L CSH +
Sbjct: 468 FHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYM 527
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V E + F+ M S YG++ E++HYGCM DLL R+G ++++ EMI MPM DV +W LL
Sbjct: 528 VKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALL 587
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CRI+ ++E + ++ P G +L ++Y+ + RW + +R + +K
Sbjct: 588 NACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRK 647
Query: 480 N-AGCSLIQLNG 490
G S I+LNG
Sbjct: 648 KIPGFSSIELNG 659
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 251/424 (59%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + P + IIRA+ + P A+ LF MR V + PD + ++ AC L
Sbjct: 148 VFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGD 207
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+A+ +H + K G D FV ++L+ Y L A F E +++V NT+I
Sbjct: 208 LGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQ 267
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
V+ +L +QLF MP RD VSW +++ G+A+ Q +EA+ F M + P+ + L
Sbjct: 268 SVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTL 327
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S LSACA G L+ G IH Y++ N + D L + L+D Y+KCG I+ A++IFE S
Sbjct: 328 LSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTR 387
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++LFTW +++ GLAMHG G +L YFS+M EA+++PD VT++G L C+HAGL+D+
Sbjct: 388 RDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWY 447
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F ME V+G+ +++HYG M DLLGR G ++EA ++I MPM + +W L CR+H
Sbjct: 448 FQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHN 507
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NVE+ E AA ++ L P D +L+++YA +W+ + +R+ + +KK+ GCS I
Sbjct: 508 NVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSI 567
Query: 487 QLNG 490
++NG
Sbjct: 568 EVNG 571
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 185/419 (44%), Gaps = 78/419 (18%)
Query: 75 STFSYNTIIRAHT----LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
+ F +NT+IR + P ++ + Q + P+ ++F +LL+A
Sbjct: 53 NVFVWNTMIRKQVENGLITRDP--PLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEG 110
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ +H+ V++ GF C FV +L+ Y V+C
Sbjct: 111 EEVHASVVRTGFACSEFVSGALLGFY---------------------VAC---------- 139
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G + RQ+FD M V W ++ Y E+A++LF M ++ + PD +A+ + +
Sbjct: 140 GLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVV 199
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
SAC LG+L K +H +IE + I VD+F+S+ L+ Y +CG ++ A F+ + KN+
Sbjct: 200 SACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIV 259
Query: 311 T-------------------------------WNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
WN+M+ G A G + +L +F M +
Sbjct: 260 VWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSG 319
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ P+ +T+L L C+ G +D + ++ ++++ + D+ + G I++A
Sbjct: 320 VSPNALTLLSTLSACASHGALDTGAWIHAYVDK-NDMNRDGSLDSSLIDMYSKCGDIDKA 378
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK-----PEDGGVYKVLA 453
+++ ++ D+F W+ ++ G +HG E A + K+K P+D + VL+
Sbjct: 379 VQIFEE-STRRDLFTWTSIVCGLAMHGR---GEKALHYFSKMKEAQVQPDDVTMVGVLS 433
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 33/278 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +F ++P S+N++I A+ F +M + P+ + L A
Sbjct: 274 LELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSA 333
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + IH+ V K D + +SL+ +Y + A ++F+E RD+
Sbjct: 334 CASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDL--- 390
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+W ++V G A + E+A+ F M + ++
Sbjct: 391 ----------------------------FTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQ 422
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD++ +V LSACA G L+QG + +E V G +VD + G + A +
Sbjct: 423 PDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYD 482
Query: 300 -IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
I E N W A L +H L V R++
Sbjct: 483 LIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLL 520
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 93/233 (39%), Gaps = 4/233 (1%)
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL--DIKPDNIALVSALSACARLGEL 259
R+ + W T++ ++ L M L ++P+ + L A E+
Sbjct: 48 RLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEV 107
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
++G+ +H + F+S L+ FY CG + ++F+ ++ L W ++
Sbjct: 108 KEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAY 167
Query: 320 AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
+L F M E + PD V + + C G + A+ + +E G+ +
Sbjct: 168 VCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKS-GIEVD 226
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
+ G G ++ A ++ PM ++ VW+ ++ H N+E+ +
Sbjct: 227 AFVSSTLISTYGECGSLDYAYRFFQETPM-KNIVVWNTMIHQSVEHNNLELGK 278
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/435 (38%), Positives = 259/435 (59%), Gaps = 2/435 (0%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
T L +A +F+ ++ T+I + + A+ LF+ M + + P+ + L
Sbjct: 200 TGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIAL 259
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L ACSQ + +T+H + + C + +LN+++ +Y L A+E+F+ + RDV
Sbjct: 260 LSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDV 319
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
S +L++GY K GDL AR+LFD MP R+ VSW ++AGY+Q+ Q EA++LF NM+D+
Sbjct: 320 FSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDV 379
Query: 238 -DIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ P LV LSA +LG LE G+ IH ++ I+V L ++D YAKCG I+
Sbjct: 380 VGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSID 439
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A ++F S EKNL +WN+M+ A +G + +L F +MI + +KPD +T +G L CS
Sbjct: 440 AAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACS 499
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+ G V E + F+ ME+ +GV + +HY CM DLL R GL++EA E+I +MPM W
Sbjct: 500 YGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGW 559
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL CR HGNVE+A+ A E +++L PED G+Y +LA++ A+ +W+DV +RR +
Sbjct: 560 GALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRER 619
Query: 476 KIKKNAGCSLIQLNG 490
+KK G SLI++ G
Sbjct: 620 GVKKVPGHSLIEIEG 634
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 182/398 (45%), Gaps = 50/398 (12%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA--ITTFKPISSASSPTTDPLSYA 64
++ C ++ Q+ QI AH GL+ I A + F +S + + YA
Sbjct: 59 LQSCSSMFQLKQIQAHITCTGLM--------NQIFPASRLLAFCALSDSGD-----IHYA 105
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
IF+ P+ F +NT+I+ + + P F QM D SF F L+AC Q
Sbjct: 106 HLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQF 165
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ +HS + K GF D+FV N L I
Sbjct: 166 AEKIVGMAVHSVIWKRGFDSDLFVQNGL-------------------------------I 194
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
YV+ G L ARQ+FD +D V+W T++ GYA+++ +EAI LF +M+ D+KP+ +
Sbjct: 195 QNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEV 254
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+++ LSAC++ G+ E GK +H +I I L ++D Y KCG + TA EIF +
Sbjct: 255 TMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNM 314
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+ +++F+W ++L G A +G + F M E I V+ + G S EA
Sbjct: 315 ERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNI----VSWNAMIAGYSQNSQPMEAL 370
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
+LF M V G+ C+ G+ G +E E+
Sbjct: 371 ELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEI 408
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 2/239 (0%)
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
+GD+ +A +FD+ + W T++ GY +++ F M+ + D+ + V A
Sbjct: 99 SGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFA 158
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L AC + E G +H I D F+ GL+ Y + G + A ++F+ S K++
Sbjct: 159 LKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDV 218
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
TW M+ G A + ++ F+ M+ + +KP+ VT++ L CS G + + L +
Sbjct: 219 VTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEH 278
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
+ ++ L M D+ + G + A E+ M DVF W+ LL G +G++
Sbjct: 279 IRR-KDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMER-RDVFSWTSLLNGYAKNGDL 335
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 275/493 (55%), Gaps = 48/493 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + C ++Q IHA F+ GL H+ + + +F +S++ S LSYA
Sbjct: 9 SLAQSCSNMRQFKAIHALFIVNGL------HLNNYAISKLISFCALSNSGS-----LSYA 57
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQ 123
IF+ I P+ F+YNT+IRA++ S+P A+ F M ++ PD ++FPF++ AC+
Sbjct: 58 SLIFSQIQNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTN 117
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + IH+ VLK G V +S HV R
Sbjct: 118 SLWMLLGKQIHNWVLKNG------VASSDRHVQTALVRF--------------------- 150
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
Y + + AR+LFD +P D V W L+ GY + EA+ F NM+ ++PD
Sbjct: 151 ---YAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDE 207
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
L +AL CA+LG L+QGK IH Y+ + + D F+ T LVD YAKCG I+ ++E+FE
Sbjct: 208 FCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFE 267
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVD 361
++N+F+W+AM+ G A+HG R ++ RM +E ++PDGV +LG ++ C+HAGL +
Sbjct: 268 GMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQE 327
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E + L + ME+ YG+ + +HY CM DLL RAG ++EAL++I++MPM VW LL G
Sbjct: 328 EGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSG 387
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDG----GVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
CR H NV++AE AA ++ + DG G Y L+++Y A + ED +IRR + +I
Sbjct: 388 CRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRI 447
Query: 478 KKNAGCSLIQLNG 490
K GCSLI++ G
Sbjct: 448 KTKPGCSLIEVEG 460
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 274/485 (56%), Gaps = 17/485 (3%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I + K++ + QIHA L +GL + +P I FK S ++ L +
Sbjct: 52 SLIDKSKSVAHLLQIHASLLRRGL-YHNP----------ILNFKLQRSYAA--LGRLDCS 98
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+ +FN P+ FS++ II +H A +SQM + + P+ ++F +L++CS
Sbjct: 99 VFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSL- 157
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ +H Q +KLG D++V L+ VY + A++LFD++ R +VS T++
Sbjct: 158 ---ESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTML 214
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y K G+L AR LF+ M RD V W ++ GYAQS E+++LF M+ P+ +
Sbjct: 215 TCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEV 274
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+++ LSAC +LG LE G+ IH YIE I+++ + T L+D Y+KCG + A +F+
Sbjct: 275 TVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRI 334
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++K++ WN+M+VG AMHG + +L F M E KP +T +G L C H GLV+E R
Sbjct: 335 RDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGR 394
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F M YG+ +++HYGCM +LLGRAG +EEA ++K M + D +W LLG CR+
Sbjct: 395 SFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRL 454
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H N+++ E A+ ++ K + G Y +L+++YA WE V K+R + I+K GCS
Sbjct: 455 HVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCS 514
Query: 485 LIQLN 489
I+++
Sbjct: 515 SIEVD 519
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 261/485 (53%), Gaps = 15/485 (3%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
RC ++ + Q+HA + GL I + ++ + P D L YA +
Sbjct: 43 RCVSMAHLRQLHAALVKSGL-----------AKDPIAASRAVAFCAGPGRDVL-YAERLV 90
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ P P++F +NT+IRA + + P AV LF M + PPD SFP LL A ++L
Sbjct: 91 RHHPRPNSFMWNTVIRALSDGARPDAAVALFVDMLSSPTPPDRRSFPSLLAAYARLGRAG 150
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ +H LKLG D +V N+ + +Y R +A LF + DVV+CN++I
Sbjct: 151 DGEALHGMALKLGLAGDAYVRNATIAMYASCGRADEALALFGQCPELDVVACNSVIVALA 210
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+AG + AR +FD MP R +W +V+ YA++ +C EA+ LF M ++P+ LVS
Sbjct: 211 RAGRVDEARSVFDAMPERTVATWSAMVSAYARAARCSEALALFSAMQADGMEPNANVLVS 270
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L CA LG L QG +H YI+ + + +++ + T LVD Y KCG ++ A ++F++++ +
Sbjct: 271 VLGCCASLGALVQGAWVHEYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQG 330
Query: 309 LF---TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
L +WN+M+ GLA+HG R ++ FS + + PD VT + L H+G+ DEA+
Sbjct: 331 LAKLSSWNSMMQGLAVHGQWREAVALFSELKSYGLSPDNVTFIAVLTAYGHSGMPDEAQA 390
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F M S +GV ++HYGC+ D L RAG + EA + I+ MPM D +W LL GCR+H
Sbjct: 391 AFASMSSEHGVEPGIEHYGCLVDALARAGRLREAEDAIRAMPMAPDAAIWGALLSGCRLH 450
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+ E+ AA ++ P D G Y + A V A IR + + K G S+
Sbjct: 451 GDAELGARAAREAVRCDPRDSGAYVLAASVLARGGDPGRGAGIRGRMREAGVGKVPGSSM 510
Query: 486 IQLNG 490
I++NG
Sbjct: 511 IEVNG 515
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 276/481 (57%), Gaps = 13/481 (2%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
T K++ QIHA G L H++ + A+ L YA I +
Sbjct: 18 TFKEVRQIHAKLYVDGTL--KDDHLVGHFVKAVAL---------SDHKYLDYANQILDRS 66
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV--SIPPDFYSFPFLLRACSQLCSHSL 129
P+ F+ N++IRAH P + + ++ + + PD Y+ FL++AC+ L
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+H ++ GF D V L+ +Y L ++F+ I D V ++ +
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD+ AR+LF+ MP RD ++W +++GYAQ + EA+ +F M +K + +A++S
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSAC +LG L+QG+ H YIE N+I++ L+T LVD YAKCG + A+E+F +EKN+
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+TW++ L GLAM+G G L FS M + + P+ VT + L GCS G VDE ++ FD
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M + +G+ +L+HYGC+ DL RAG +E+A+ +I++MPM VWS LL R++ N+E
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ A++ +++L+ + G Y +L+++YA+++ W++V +R+S+ + ++K GCS++++N
Sbjct: 427 LGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 486
Query: 490 G 490
G
Sbjct: 487 G 487
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/413 (37%), Positives = 241/413 (58%), Gaps = 1/413 (0%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL-AQTIHSQV 137
+N +I H A F M P ++ +L AC + L +H +V
Sbjct: 112 WNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRV 171
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+ G + D+ V N+L+ +Y + A +LFD + R VVS +L+ G + G + AR
Sbjct: 172 VGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEAR 231
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
LF RMP RD VSW ++ GY Q+ + EA+++F M ++ D +VS ++ACA+LG
Sbjct: 232 DLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLG 291
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
LE G+ + Y+ I++D+F+ L+D Y+KCG I A+++F+ ++ FTW A+++
Sbjct: 292 ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIIL 351
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GLA++G G ++ F RMI PD VT +G L C+HAGLVD+ R+ F M Y ++
Sbjct: 352 GLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIA 411
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+ HYGC+ DL GRAG I EAL+ I +MPM + +W LL CR+HGN EI E E
Sbjct: 412 PNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTER 471
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++++ PE+ VY +L+++YA +RWEDV ++R ++ IKK GCSLI++NG
Sbjct: 472 LLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNG 524
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 149/354 (42%), Gaps = 44/354 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P T S+ +I + + A+ +F +M+ ++ D ++ ++ AC+Q
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + + + + + G D FV N+L
Sbjct: 290 LGALEMGEWVRVYMSRQGIKMDAFVGNAL------------------------------- 318
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G + A +F M RD +W ++ G A + EEAI++F M+ + PD
Sbjct: 319 IDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDE 378
Query: 244 IALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIE-IF 301
+ + L+AC G +++G+ + E I + ++D + + G I A++ I
Sbjct: 379 VTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAID 438
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC-SHAGLV 360
+ N W +L +HG + + R+++ + P+ T+ L +
Sbjct: 439 QMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQ--MDPENSTVYTLLSNIYAKCNRW 496
Query: 361 DEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
++ R+L ME G+ KE GC L+ G+I E + + PM +++
Sbjct: 497 EDVRRLRHTIMEK--GIKKE---PGC--SLIEMNGIIHEFVAGDQSHPMSKEIY 543
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 152/379 (40%), Gaps = 71/379 (18%)
Query: 88 LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVF 147
L ++ +AV +++M PD Y+FP LL+A ++ S + + +H+ V+K G +
Sbjct: 20 LVAAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAH 79
Query: 148 VLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRD 207
V SL+ Y A+ L E RD
Sbjct: 80 VATSLVTAYAAGGDGAAARALLSE-RERDT------------------------------ 108
Query: 208 AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR-LGELEQGKNIH 266
V W L++G+ + + EA F +M P + VS LSAC + G++ G +H
Sbjct: 109 PVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVH 168
Query: 267 RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
+ + + D + LVD YA+C + +A ++F+ Q +++ +W ++L GL G
Sbjct: 169 GRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVD 228
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME--------------- 371
+ F RM E D V+ + G A EA ++F EM+
Sbjct: 229 EARDLFGRMPER----DTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVI 284
Query: 372 -------------------SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
S G+ + + D+ + G IE AL++ K M D
Sbjct: 285 TACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHH-RDK 343
Query: 413 FVWSGLLGGCRIHGNVEIA 431
F W+ ++ G ++G E A
Sbjct: 344 FTWTAIILGLAVNGYGEEA 362
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 24/290 (8%)
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
HAR+L + +P R LVA E+A+ + M+ PD L A A
Sbjct: 7 HARRLLEGIPRR------CLVAAR------EDAVAGYARMLARGAMPDAYTFPPLLKAVA 54
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
R + +H ++ + ++ ++T LV YA G A + + WNA
Sbjct: 55 RGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNA 114
Query: 315 MLVGLAMHGLGRL---SLVYFSRMIEARIKPDGVTILGALVGCSHA-GLVDEARKLFDEM 370
++ G H R + F M A P VT + L C G V ++ +
Sbjct: 115 LISG---HNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRV 171
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
GV +L+ + D+ +E A ++ M + V W+ LL G G V
Sbjct: 172 VG-SGVLPDLRVENALVDMYAECADMESAWKLFDGMQV-RSVVSWTSLLSGLTRLGRV-- 227
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
+ A + ++ D + + D Y A R+ + +++ R + + +
Sbjct: 228 -DEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSAD 276
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/431 (38%), Positives = 253/431 (58%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
++ A +F+ S+NT+I + P A+ +F +M ++ PD + ++
Sbjct: 171 MAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVS 230
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+QL L + +H V G C V ++N +M +Y L A+ +F+ I + +VS
Sbjct: 231 GSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVS 290
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
T+I GY + G + AR++FD MP RD W L+ GY Q + +EA++LF +M + +
Sbjct: 291 WTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMV 350
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+PD+I +V+ LSAC++LG LE G +H YI+ ++ + L T LVD Y+KCG I AI
Sbjct: 351 EPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIR 410
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ EKN TW AM+ GLA HG +++ YF RMIE ++PD +T +G L C HAGL
Sbjct: 411 VFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGL 470
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V E ++ F M S Y + +++KHY CM DLLGRAG ++EA ++ MPM D VW L
Sbjct: 471 VKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALF 530
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+HGN+ + E AA +++L P D G+Y +LA++YA A+ + K+R + ++K
Sbjct: 531 FACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEK 590
Query: 480 NAGCSLIQLNG 490
GCS I+LNG
Sbjct: 591 VPGCSCIELNG 601
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 203/454 (44%), Gaps = 80/454 (17%)
Query: 18 QIHAHFLTKGLLF-LSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPST 76
Q+HAH LT GL+ SP + + ++ A+ SP + AL P S
Sbjct: 26 QLHAHLLTAGLMSSRSPFPLASRLVEALAHSD--DPRHSPRPLLHALALLASLPTPPDSA 83
Query: 77 FSYNTIIRAHTLFSS--------PLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
YN +RA +L + PL +L S PD +FPFLL+AC++L +
Sbjct: 84 SPYNAALRALSLCTDRGLVTRCLPLYCSLLRSAR------PDHLTFPFLLKACARLQERN 137
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ VL LGF DVFV+N+ MH V + +A++LFD RD+VS NTLI GYV
Sbjct: 138 YGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYV 197
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+ G A ++F RM AV+ PD + ++
Sbjct: 198 RRGVPREALEMFWRMVGDGAVT------------------------------PDEVTMIG 227
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
+S A+L +LE G+ +H Y+E + +R L ++D Y KCG + A +FE +K
Sbjct: 228 VVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKT 287
Query: 309 LFTWNAMLVGLAMHGL-------------------------------GRLSLVYFSRMIE 337
+ +W M+VG A GL G+ +L F M E
Sbjct: 288 IVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQE 347
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
A ++PD +T++ L CS G ++ + ++ VS + + D+ + G IE
Sbjct: 348 AMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDR-RRVSLSVMLGTNLVDMYSKCGNIE 406
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+A+ + K++P + W+ ++ G HG+ ++A
Sbjct: 407 KAIRVFKEIP-EKNALTWTAMISGLANHGHADVA 439
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 284/491 (57%), Gaps = 21/491 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C + + + ++HAH + L ++ T I++ ++ +A
Sbjct: 20 LRACASFRDLLRVHAHAVR--LSLSQSSYLATQIVHLCNAHGRVA-----------HATR 66
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIP------PDFYSFPFLLR 119
+F+ + P+ +N +I+A+ L+A+ ++ +M R P D +++PFLL+
Sbjct: 67 VFSQVREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLK 126
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC L + L + +H V++ G + V NSL+ +Y L A+++FD + RDVVS
Sbjct: 127 ACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVS 186
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
NT+I + + G + AR +F+ MP + VSW LV+GY + A++ F M
Sbjct: 187 WNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGF 246
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+PD++++V+ L ACA+LG LE G+ I+ Y +Q+ ++++ LV+ YAKCG I+ A++
Sbjct: 247 EPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQ 306
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAG 358
+F EK++ +W+ M+ GLA HG + ++ F+ M + +KP+G+T +G L CSHAG
Sbjct: 307 LFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAG 366
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+DE FD M VYG+ ++HYGC+ DLL R+G I+ L++I MP+ D +W +
Sbjct: 367 LLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSV 426
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR HG+V+ A AAE ++ L+PED G +LA+VYA A RW +V R+++ + ++
Sbjct: 427 LNACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMR 486
Query: 479 KNAGCSLIQLN 489
K GCSLI+++
Sbjct: 487 KTPGCSLIEVD 497
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 283/492 (57%), Gaps = 18/492 (3%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + I CK+++QI Q HA +T L I + ++ K + A+ + LS
Sbjct: 19 LVSLIDSCKSMQQIKQTHAQLITTAL-----------ISHPVSANKLLKLAACAS---LS 64
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFS-SPLNAVVLFSQM-RTVSIPPDFYSFPFLLRA 120
YA +F+ IP P F YNT+I+AH+L S N++++F + + + + P+ YSF F A
Sbjct: 65 YAHKLFDQIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSA 124
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + + +K+G +VFV+N+L+ +Y + + ++Q++F + RD+ S
Sbjct: 125 CGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSW 184
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NTLI YV +G+++ A++LFD M RD VSW T++AGY Q EA+ F M+ + K
Sbjct: 185 NTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPK 244
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ LVSAL+AC+ L L+QGK IH YI +I+++ L ++D YAKCG I +A +
Sbjct: 245 PNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRV 304
Query: 301 -FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
FE ++ ++ WNAM+ G AMHG+ ++ F +M +I P+ VT + L CSH +
Sbjct: 305 FFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYM 364
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E + F M S Y ++ E++HYGCM DLL R+GL++EA +MI MPM DV +W LL
Sbjct: 365 VEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALL 424
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CRI+ ++E + + P G + +L+++Y+ + RW + +R + + +K
Sbjct: 425 NACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRDRK 484
Query: 480 N-AGCSLIQLNG 490
GCS I+L G
Sbjct: 485 KIPGCSSIELKG 496
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 264/473 (55%), Gaps = 38/473 (8%)
Query: 51 SSASSPTTDPLSY--ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
S A+ T LS+ +L +F+ + P+ F +N +I+ + P A++L+ +M
Sbjct: 75 SYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFR 134
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
P+ Y++P +L+ACS + +H+ ++K G D +L+S + +Y F RL +A+ +
Sbjct: 135 PNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRI 194
Query: 169 FDEILYR-DVVSCNTLIDGYVKAGDLAHARQLFDRMP----------------------- 204
D+ D V N +IDGY++ G++ AR+LF+ MP
Sbjct: 195 LDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEV 254
Query: 205 ---------FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
RD +SW ++ GY Q EA+++F M I+P L S LSACA
Sbjct: 255 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 314
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
LG L+QG+ IH Y + N I++D L T LVD YAKCG I+ A E+FE K + +WNAM
Sbjct: 315 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 374
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
+ GLAMHG ++ FS+M I P+ +T +G L C+H GLV + +F+ M YG
Sbjct: 375 IGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 431
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
V +++HYGC+ DLLGRAGL+ EA +++ +P VW LLG CR HGNVE+ E
Sbjct: 432 VEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVG 491
Query: 436 EHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ +++L+P++ G Y +L+++YA A RWE+V ++R+ + IK G S+I L
Sbjct: 492 KILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 544
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/518 (32%), Positives = 288/518 (55%), Gaps = 44/518 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + +C ++K QIHA GL P +L+ T +D L YA
Sbjct: 7 SLLSKCSSLKPTKQIHAQICKTGL-HTDPLVFGKLLLHCAITI----------SDALHYA 55
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLRACSQ 123
L +F++ P P TF +NT+IR+ +L +PL+++ F Q+R ++ PD ++F F L+A +
Sbjct: 56 LRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVAN 115
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRLRD--------- 164
+HSQ + GF +FV +L+ +Y VF + +
Sbjct: 116 SRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAV 175
Query: 165 ------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
AQ++F + R++ S N ++ GY KAG+L AR++F MP RD VSW
Sbjct: 176 LTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWS 235
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
T++ G+A + +EA F ++ +I+ + ++L LSACA+ G E GK +H ++E
Sbjct: 236 TMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKA 295
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVY 331
++ L+D Y+KCG + A +F++ +++ +W +++ GLAMHG G ++
Sbjct: 296 GFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQL 355
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M E+ ++PDG+T + L CSH+GLV+E LF +M+++YG+ ++HYGCM DL G
Sbjct: 356 FHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYG 415
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
RA +++A E I +MP+ + +W LLG C IHGN+E+AE + ++ P++ G + +
Sbjct: 416 RAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVL 475
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
L++VYA A +W+DV IRR++ +KK G S+I+++
Sbjct: 476 LSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEID 513
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 277/487 (56%), Gaps = 10/487 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA--ITTFKPISSASSPTTDPLSY 63
++ C + + IH FL H+++ + A + S + T+ L Y
Sbjct: 18 LLQSCSSFSDLKIIHG--------FLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGY 69
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ I P+ F +N +IR + + P A ++QM I PD +FPFL++A S+
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + HSQ+++ GF DV+V NSL+H+Y + A +F ++ +RDVVS ++
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY K G + +AR++FD MP R+ +W ++ GYA+++ E+AI LF M + +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+VS +S+CA LG LE G+ + Y+ + + V+ L T LVD + +CG I AI +FE
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
E + +W++++ GLA+HG ++ YFS+MI P VT L CSH GLV++
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++++ M+ +G+ L+HYGC+ D+LGRAG + EA I KM + + + LLG C+
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
I+ N E+AE ++K+KPE G Y +L+++YA A +W+ + +R + +KK G
Sbjct: 430 IYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGW 489
Query: 484 SLIQLNG 490
SLI+++G
Sbjct: 490 SLIEIDG 496
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 166/427 (38%), Positives = 254/427 (59%), Gaps = 11/427 (2%)
Query: 72 PYPSTFSYNTIIRAHTL--FSSPL--NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
P +F +N +IRA T +P A+ L+ +MR ++ PD ++FPFLL++ + +
Sbjct: 20 PNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSIN---TP 76
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+ +H+Q+L LG D FV SL+++Y A++ FDEI D+ S N +I
Sbjct: 77 HRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHAN 136
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---IKPDNI 244
KAG + AR+LFD+MP ++ +SW ++ GY + + A+ LF ++ L+ ++P+
Sbjct: 137 AKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEF 196
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES- 303
+ S LSACARLG L+ GK +H YI+ +++D L T L+D YAKCG I A IF++
Sbjct: 197 TMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNL 256
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
EK++ W+AM+ +MHGL L F+RM+ ++P+ VT + L C H GLV E
Sbjct: 257 GPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEG 316
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F M + YGVS ++HYGCM DL RAG IE+A ++K MPM DV +W LL G R
Sbjct: 317 NEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGAR 376
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
IHG+VE E A +++L P + Y +L++VYA RW +V +R ++ IKK GC
Sbjct: 377 IHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGC 436
Query: 484 SLIQLNG 490
SL++++G
Sbjct: 437 SLVEVDG 443
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 263/431 (61%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F I S+N++I SP A+ LF +M + + + +L A
Sbjct: 184 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 243
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ + + S + + ++ + N+++ +Y + DA+ LFD + +D V+
Sbjct: 244 CAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 303
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
T++DGY + D AR++ + MP +D V+W L++ Y Q+ + EA+ +F + + +I
Sbjct: 304 TTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNI 363
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
K + I LVS LSACA++G LE G+ IH YI+ N I+++ ++++ L+ Y+KCG + A E
Sbjct: 364 KLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKARE 423
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F S +++++F W+AM+ GLAMHG G ++ F +M EA +KP+GVT CSH GL
Sbjct: 424 VFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 483
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDEA LF +MES YG+ E KHY C+ D+LGR+G +E+A++ I+ MP+ VW LL
Sbjct: 484 VDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 543
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C+IH N+ +AE A +++L+P + G + +L+++YA + +W++V ++R+ + +KK
Sbjct: 544 GACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKK 603
Query: 480 NAGCSLIQLNG 490
GCS I+++G
Sbjct: 604 EPGCSSIEIDG 614
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 222/456 (48%), Gaps = 78/456 (17%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I RC +++Q+ Q HAH + G+ F P + L+AI +S L YA
Sbjct: 36 SLIDRCSSLRQLKQTHAHMIRTGM-FSDP--YSASKLFAIAALSSFAS--------LEYA 84
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP--PDFYSFPFLLRACS 122
+F+ IP P++F++NT+IRA+ P+ ++ F M + P+ Y+FPFL++A +
Sbjct: 85 RKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAA 144
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
++ S SL Q++H +K DVFV NSL+H Y L A ++F I +DVVS N+
Sbjct: 145 EVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 204
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I+G+V+ G ++A++LF M D+K
Sbjct: 205 MINGFVQKGSP-------------------------------DKALELFKKMESEDVKAS 233
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++ +V LSACA++ +LE G+ + YIE N++ V+ L+ ++D Y KCG I A +F+
Sbjct: 234 HVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD 293
Query: 303 SSQEKNLFTWNAMLVGLA-----------MHGLGRLSLVYFSRMIEA------------- 338
+ +EK+ TW ML G A ++ + + +V ++ +I A
Sbjct: 294 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLV 353
Query: 339 --------RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
IK + +T++ L C+ G ++ R + ++ G+ + +
Sbjct: 354 FHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKK-NGIKMNFYVTSALIHMY 412
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ G +E+A E+ + DVFVWS ++GG +HG
Sbjct: 413 SKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHG 447
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 268/475 (56%), Gaps = 49/475 (10%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTIL--YAITTFKPISSASSPTTDPLSYALSIFNNIPYPS 75
QIHAH + GL S + T++ YA++ F + +F+ P+
Sbjct: 159 QIHAHSIKTGLS--SNLFVKNTLMRFYAVSGF-------------IEAVEKVFDQGPHWD 203
Query: 76 TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS 135
S+ T+I+A++ P A+ F +M + D + +L ACSQL +L + I
Sbjct: 204 LISWTTLIQAYSKMGYPSEAIAAFFRMNCTA---DRMTLVVVLSACSQLGDFTLGKKI-- 258
Query: 136 QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
L ++ LFD ++ DV N L+D Y+K G
Sbjct: 259 ----LAYM---------------------DHHLFD--VHSDVFLGNALLDMYLKCGQPHL 291
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
ARQLF MP ++ VSW ++++G A +EA+ +F M + +KPD++ LV L++CA
Sbjct: 292 ARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCAN 351
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
LG+LE GK +H YI+ N ++ D +++ LVD YAKCG I+ A +F++ + K+++++ AM
Sbjct: 352 LGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAM 411
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
+VG AMHG +L FS M ++PD VT++G L CSHAGL++E R+ F +M +Y
Sbjct: 412 IVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYH 471
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
+ + +HYGCM DLLGRAGLI EA KMP+ D VW LLG C+IH VE+ E
Sbjct: 472 LQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVI 531
Query: 436 EHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ +++++PE G Y +++++Y++A+RW D +K R+++ IKK GCS I+++G
Sbjct: 532 QKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDG 586
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 216/457 (47%), Gaps = 49/457 (10%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ CK++++I QIHA + + + ++ IT+ + + L YA
Sbjct: 32 LLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDVHLADSIQNLWYAS 91
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVV-LFSQMRTVSIPPDFYSFPFLLRACSQL 124
S+ N + +N II++ + ++ + L+ QM + + PD Y+ P+LL+ACSQ
Sbjct: 92 SLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQS 151
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ A IH+ +K G ++FV N+LM Y V + +++FD+ + D++S TLI
Sbjct: 152 HAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLI 211
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y K G + A F RM + D +
Sbjct: 212 QAYSKMGYPSEAIAAFFRM----------------------------------NCTADRM 237
Query: 245 ALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
LV LSAC++LG+ GK I Y++ L + D FL L+D Y KCG + A ++F
Sbjct: 238 TLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFH 297
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
KNL +WN+M+ GLA GL + +L F RM +KPD VT++G L C++ G ++
Sbjct: 298 LMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLEL 357
Query: 363 ARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+ + ++ +K G +A D+ + G I++A + + M DV+ ++ +
Sbjct: 358 GKWVHSYID-----KNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKC-KDVYSYTAM 411
Query: 419 LGGCRIHGNVEIAEAAAEHV--MKLKPEDGGVYKVLA 453
+ G +HG + A A + M ++P+ + VL+
Sbjct: 412 IVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLS 448
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 241/385 (62%), Gaps = 3/385 (0%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD YSFPF+L+AC++L + IHS LKLG DVFV N+L+ + + A+ +
Sbjct: 8 PDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAV 67
Query: 169 FDEI--LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
FD + L RDVVS N++I GY+++ A ++FDR+P R+ V W +++AGYAQSD +E
Sbjct: 68 FDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 127
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
AI+LF M D + LSAC G L QG+ IH Y E N I +D L+
Sbjct: 128 AIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIG 187
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGV 345
Y+KCG I A+EIF + ++F+W+A++ GLAM+G +L FS+M + + I+P+ +
Sbjct: 188 MYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEI 247
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T LG L C+H G VD+ F+ M +Y ++ ++HYGCM DLLGRA L+ EA + I+
Sbjct: 248 TFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRT 307
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
+P+ DV +W LL CR HGN+E+AE AA+ + +L+P G +L++VYA+A RW DV
Sbjct: 308 LPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDV 367
Query: 466 VKIRRSLDAGKIKKNAGCSLIQLNG 490
++R+ + +IKK GCS ++++G
Sbjct: 368 KRVRKDMATQRIKKQPGCSFVEIDG 392
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 46/312 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL +F+ IP+ +T + ++I + A+ LF +M+ D + +L AC
Sbjct: 97 ALKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGH 156
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+LAQ +H+YC R++ E+ D+ + N L
Sbjct: 157 W--GALAQ------------------GRWIHLYCE----RNSIEM-------DLNARNAL 185
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPD 242
I Y K GD+ A ++F + D SW +++G A + + ++A+ LF M M DI+P+
Sbjct: 186 IGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPN 245
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
I + L AC G +++G ++ + + QI L+ G+ + + A + E
Sbjct: 246 EITFLGVLCACNHGGFVDKG--LYYFNAMTQIYN---LTPGIEHYGCMVDLLGRANLLVE 300
Query: 303 SSQ-------EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL--GALVG 353
+ + + ++ W ++L HG L+ ++ E + G +L
Sbjct: 301 AEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYAS 360
Query: 354 CSHAGLVDEARK 365
S G V RK
Sbjct: 361 ASRWGDVKRVRK 372
>gi|224141027|ref|XP_002323876.1| predicted protein [Populus trichocarpa]
gi|222866878|gb|EEF04009.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 250/406 (61%), Gaps = 10/406 (2%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF 111
+A SP+ D L+YA +F+ +P+P+TF YNT+IR + S P ++ L +QMR + PD
Sbjct: 5 AAVSPSGD-LAYAQRLFDQLPHPNTFFYNTLIRGYAKSSIPSYSLHLVNQMRQNGVDPDE 63
Query: 112 YSFPFLLRACSQL---CSHSLA-----QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR 163
++F FL++A S++ + +L IH VLKLGF +FV N+L+H+Y
Sbjct: 64 FTFNFLIKARSRVRVNINRNLPLVVECDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPV 123
Query: 164 DAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQ 223
A +FDE + DVVS + L+ +V+AG+L AR +FD+MP RD VSW T+V+ Y+Q+
Sbjct: 124 VAWRVFDETVGVDVVSWSGLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKY 183
Query: 224 CEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG 283
EA++L+ M+D ++PD + LVS +SAC LG+L+ G ++H YI+ N R L
Sbjct: 184 SREALELYVTMLDKGVRPDEVTLVSVISACTNLGDLQMGYSVHSYIDENGFRWMVSLCNA 243
Query: 284 LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
L+D YAKCG ++ A ++F S K+L TWN+M+ A + + FSRM + PD
Sbjct: 244 LIDMYAKCGCMDRAWQVFNSMSRKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPD 303
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
GVT L L +H GLVDE +LF+ M+ +G+ ++HYGC+ ++LG+AG +EEA E+I
Sbjct: 304 GVTFLAVLTAYAHVGLVDEGYRLFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELI 363
Query: 404 KKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
MP+ + VW LL CR HG+V + E + +++LK DGG Y
Sbjct: 364 TSMPLPSNDVVWGVLLAACRKHGDVYMGERVVKKLLELKL-DGGYY 408
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 274/512 (53%), Gaps = 33/512 (6%)
Query: 1 MTLNNFIKRCK------TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSAS 54
+TL N I C + IH I +GL+ +S T ++ A + A
Sbjct: 402 LTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVS-----TNLMRAYCLCSGVGEAR 456
Query: 55 S-----PTTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN 94
P + +S+ A +F +P S+ T+I + L +
Sbjct: 457 RLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHE 516
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+V++ M + + L+ AC +L + +H V+K GF C F+ +++H
Sbjct: 517 ALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIH 576
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
Y + A F+ + S N L+ G++K + AR++FD MP RD SW T+
Sbjct: 577 FYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTM 636
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI 274
++GYAQ+DQ A++LF M+ IKP+ + +VS SA A LG L++G+ H YI I
Sbjct: 637 ISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESI 696
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK--NLFTWNAMLVGLAMHGLGRLSLVYF 332
++ L L+D YAKCG IN+A++ F ++K ++ WNA++ GLA HG + L F
Sbjct: 697 PLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVF 756
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
S M IKP+ +T +G L C HAGLV+ R++F M+S Y V ++KHYGCM DLLGR
Sbjct: 757 SDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGR 816
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVL 452
AGL+EEA EMI+ MPM D+ +W LL CR HG+V I E AAE + L P GG +L
Sbjct: 817 AGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLL 876
Query: 453 ADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+++YA+A RWEDV +RR++ ++++ GCS
Sbjct: 877 SNIYADAGRWEDVSLVRRAIQNQRMERMPGCS 908
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 221/484 (45%), Gaps = 59/484 (12%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSA-----SS 55
+ L + +K C + Q Q+H+ L GL S I +++ I A +
Sbjct: 273 LALVSALKYCSSSSQGRQLHSLVLKLGLH--SNTFIQNSLINMYAKRGSIKDAQLLFDAC 330
Query: 56 PTTDPLS---------------YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
PT +P+S A +F+ +P SY T+I A+ +F
Sbjct: 331 PTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFK 390
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
MR+ + P+ + ++ ACS + IH+ +KL V V +LM YC+
Sbjct: 391 DMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCS 450
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
+ +A+ LFD + ++VS N +++GY KAG + AR+LF+R+P +D +SWGT++ GY
Sbjct: 451 GVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYIL 510
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
++ EA+ ++ M+ + + I +V+ +SAC RL + G +H + +F+
Sbjct: 511 MNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFI 570
Query: 281 STGLVDFYAKCG-------------------------------YINTAIEIFESSQEKNL 309
T ++ FYA CG ++ A +IF+ E+++
Sbjct: 571 QTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDV 630
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
F+W+ M+ G A R++L F +M+ + IKP+ VT++ + G + E R +
Sbjct: 631 FSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEY 690
Query: 370 M--ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM-PMGGDVFVWSGLLGGCRIHG 426
+ ES+ ++ L+ + D+ + G I AL+ ++ V W+ ++ G HG
Sbjct: 691 ICNESI-PLNDNLR--AALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHG 747
Query: 427 NVEI 430
+ +
Sbjct: 748 HASM 751
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 104/261 (39%), Gaps = 76/261 (29%)
Query: 228 IQLFCNM-MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
I +FCN + + +ALVSAL C+ QG+ +H + + ++F+ L++
Sbjct: 256 IGIFCNARLHQNHYECELALVSALKYCS---SSSQGRQLHSLVLKLGLHSNTFIQNSLIN 312
Query: 287 FYAK--------------------------CGY-----INTAIEIFESSQEKNLFTWNAM 315
YAK CGY ++ A ++F+ +K ++ M
Sbjct: 313 MYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTM 372
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL---------------- 359
++GL + R +L F M + P+ +T++ + CSH G
Sbjct: 373 IMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFV 432
Query: 360 -------------------VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
V EAR+LFD M V VS + M + +AGL++ A
Sbjct: 433 EGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVS-----WNVMLNGYAKAGLVDMAR 487
Query: 401 EMIKKMPMGGDVFVWSGLLGG 421
E+ +++P DV W ++ G
Sbjct: 488 ELFERVP-DKDVISWGTMIDG 507
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 258/428 (60%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P S+N+++ + + +F MR + D + ++ A
Sbjct: 128 LGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLA 187
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L +A + + + DV++ N+L+ +Y + A+ +FD++ +R++VS
Sbjct: 188 CTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSW 247
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GY KAG+L AR+LFD M RD +SW ++ Y+Q+ Q EA++LF MM+ +K
Sbjct: 248 NAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVK 307
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I + S LSACA G L+ G+ H YI+ ++ D ++ L+D Y KCG + A+E+
Sbjct: 308 PDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEV 367
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K+ +W +++ GLA++G +L YFSRM+ ++P +G L+ C+HAGLV
Sbjct: 368 FKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLV 427
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F+ ME VYG+ E+KHYGC+ DLL R+G ++ A E IK+MP+ DV +W LL
Sbjct: 428 DKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLS 487
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
++HGN+ +AE A + +++L P + G Y + ++ YA ++RWED VK+R ++ ++K
Sbjct: 488 ASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKP 547
Query: 481 AGCSLIQL 488
+G S I++
Sbjct: 548 SGSSCIEM 555
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 205/438 (46%), Gaps = 74/438 (16%)
Query: 51 SSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPD 110
S A SP+T + A ++F I P+ +N +IR ++ P A+ +++ M + +
Sbjct: 19 SYALSPST--ILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGN 76
Query: 111 FYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
++ FL +AC+++ S TIH++VLKLGF ++V N+L+++Y L AQ++FD
Sbjct: 77 NLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFD 136
Query: 171 EILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
E+ RD+VS N +LV GY Q + E + +
Sbjct: 137 EMPERDLVSWN-------------------------------SLVCGYGQCKRFREVLGV 165
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
F M +K D + +V + AC LGE + YIE N + +D +L L+D Y +
Sbjct: 166 FEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGR 225
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG--------------------------- 323
G ++ A +F+ Q +NL +WNAM++G G
Sbjct: 226 RGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSY 285
Query: 324 --LGRLS--LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
G+ + L F M+E+++KPD +T+ L C+H G +D D ++ Y V +
Sbjct: 286 SQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQK-YDVKAD 344
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM 439
+ + D+ + G++E+ALE+ K+M D W+ ++ G ++G A++A ++
Sbjct: 345 IYVGNALIDMYCKCGVVEKALEVFKEM-RKKDSVSWTSIISGLAVNG---FADSALDYFS 400
Query: 440 KL-----KPEDGGVYKVL 452
++ +P G +L
Sbjct: 401 RMLREVVQPSHGAFVGIL 418
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 280/485 (57%), Gaps = 15/485 (3%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+CK++ ++++IH +T GL P + +F +SS+ + YA
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEP------FVSQTLSFSALSSSGD-----VDYAYKFL 65
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ + P + +N +IR + +P ++ ++ QM + PD ++PFL+++ S+L +
Sbjct: 66 SKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRK 125
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
L ++H V+K G D+F+ N+L+H+Y F A++LFDE+ ++++V+ N+++D Y
Sbjct: 126 LGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYA 185
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPDNIALV 247
K+GD+ AR +FD M RD V+W +++ GY + + +A+++F MM + K + + +V
Sbjct: 186 KSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMV 245
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF--ESSQ 305
S + ACA LG L +GK +HRYI + + L T L+D YAKCG I A +F S +
Sbjct: 246 SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E + WNA++ GLA HG R SL F +M E++I PD +T L L CSH GLV EA
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH 365
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F ++ G + +HY CM D+L RAGL+++A + I +MP+ + LL GC H
Sbjct: 366 FFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINH 424
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
GN+E+AE + +++L+P + G Y LA+VYA ++ +R +++ +KK AG S+
Sbjct: 425 GNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 484
Query: 486 IQLNG 490
+ L+G
Sbjct: 485 LDLDG 489
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 295/548 (53%), Gaps = 79/548 (14%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ +C + Q+ Q+HA + + L HI ++ A++ + + AL
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLH--QDLHIAPKLISALSLCRQTN-----------LALR 72
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN + P+ N++IRAH L S P A +FS+M+ + D +++PFLL+ACS L
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSW 132
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYC------------VFHR------------- 161
+ + +H+ + KLG D++V N+L+ Y +F +
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
Query: 162 --------LRDAQELFDEILYRDVVSCNTLIDGYV------------------------- 188
LRDA++LFDE+ RD++S NT++DGY
Sbjct: 193 GGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWST 252
Query: 189 ------KAGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
KAGD+ AR +FD+MPF ++ V+W ++AGYA+ +EA +L M+ ++
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLR 312
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D A +S L+ACA G L G H I+ + + ++ + L+D YAKCG + A ++
Sbjct: 313 FDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDV 372
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +K+L +WN ML GL +HG G+ ++ FSRM + I PD VT + L C+HAGL+
Sbjct: 373 FNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLI 432
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE F ME VY + +++HYGC+ DLLGR G ++EA+++++ MPM +V +W LLG
Sbjct: 433 DEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLG 492
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+H V+IA+ ++++KL P D G Y +L+++YA A+ WE V IR + + ++K
Sbjct: 493 ACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKP 552
Query: 481 AGCSLIQL 488
+G S ++L
Sbjct: 553 SGASSVEL 560
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 268/487 (55%), Gaps = 16/487 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ K + Q+ QIH H + G + Y T I + + + A
Sbjct: 136 LLQASKFLSQVMQIHCHAIITGSFYYG---------YLQNTLMKIYLEN----EKMGLAY 182
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F + P S+N +I + + A+ +M + + PD ++ LL C +L
Sbjct: 183 QVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLG 242
Query: 126 SHSLAQTIHSQVLKLGFI--CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L +++H+ + + G I ++ + N+L+ +Y LR AQ +F+ I+ +D +S NT+
Sbjct: 243 DAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTM 302
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY K G+L A F+ MP RD VSW +++AGYAQ C +LF NM+ +I PD
Sbjct: 303 IAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDF 362
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +++ +SA A +G L G+ IH ++ Q+++D+FL + +D Y KCG I A +F
Sbjct: 363 VTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFRE 422
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
EK++ W M+ G A HG G +L F M E + P+ VT + L CSH+G V +
Sbjct: 423 VTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQE-YVMPNQVTFVAVLTACSHSGFVSQG 481
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++F+ M+ YG+ ++HYGC+ DLLGR+G E ++I+ MPM +W +L CR
Sbjct: 482 LRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACR 541
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+GN+EIAE A + ++KL+PE G Y +L+++YA + RW+ KIR +++ +KK AGC
Sbjct: 542 AYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGC 601
Query: 484 SLIQLNG 490
S + ++G
Sbjct: 602 SSVVVDG 608
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 169/414 (40%), Gaps = 86/414 (20%)
Query: 55 SPTTDP--LSYALSIF-NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF 111
S T P L A+ +F ++ P+P+ + YNT+I A +L S + ++ + + I P+
Sbjct: 73 SAITHPENLDMAVLLFRHHTPHPNLYIYNTMISALSL--SLNQSFAFYNSLLSSCIYPNR 130
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
+F FLL+A L S IH + G ++ N+LM +Y ++ A ++F +
Sbjct: 131 STFLFLLQASKFL---SQVMQIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQ 187
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+ D VS N +I GY K G EA++
Sbjct: 188 MAAPDAVSFNIMIFGYAKKG-------------------------------HNIEALKFL 216
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS--FLSTGLVDFYA 289
M+ L +KPD ++ L C RLG+ + GK++H +IE + S L+ L+D Y
Sbjct: 217 HEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYV 276
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY------------------ 331
KC + A IF K+ +WN M+ G A +G L + +
Sbjct: 277 KCKELRIAQSIFNVIVRKDTISWNTMIAGYA--KVGNLEIAHNFFEDMPCRDLVSWNSII 334
Query: 332 ---------------FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
F M+ I PD VTI+ + + G + R + + V
Sbjct: 335 AGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHG-----WVV 389
Query: 377 SKELKHYGCMA----DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
++K + D+ + G I+ A M+ + DV VW+ ++ G HG
Sbjct: 390 RMQMKIDAFLGSAFIDMYWKCGSIKRAC-MVFREVTEKDVTVWTTMITGFAFHG 442
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 242/389 (62%)
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR 161
MR + PD ++ F+L+AC +L +TIH KLGF ++F+ N ++++Y +
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
+ DA LF+++ RD V+ N +I K GD+ A F RMP ++ SW ++++G+ Q
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
+ EAI LF + D ++P+ + +VS L+ACA LG+L+ G+ +H Y + + + +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK 341
L+D Y KCG + A +F +E+ + +W+AM+ GLAMHG +L FS MI+ +K
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
P+GVT +G L CSH GL+DE R+ F M + YGV +++HYGC+ DL RAGL+EEA E
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADR 461
I MP+ + VW LLGGC++H N+++AE A +H+ +L P + G Y V++++YA A+R
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAER 360
Query: 462 WEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
WED ++R+ + +KK +G S I +NG
Sbjct: 361 WEDAARVRKLMKDRGVKKTSGWSSITVNG 389
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 33/261 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A F +P + S+ ++I P A+ LF ++ ++ P+ + +L AC+
Sbjct: 95 AYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACAD 154
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L L + +H K GF +V V N+L+ +Y L +A+ +F E+ R VVS
Sbjct: 155 LGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVS---- 210
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
W ++AG A Q EEA+ LF M+ L +KP+
Sbjct: 211 ---------------------------WSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE-IF 301
+ + L AC+ +G +++G+ + + + G +VD +++ G + A E I
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFIL 303
Query: 302 ESSQEKNLFTWNAMLVGLAMH 322
+ N W A+L G +H
Sbjct: 304 SMPIKPNGVVWGALLGGCKVH 324
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 247/412 (59%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N +I H + F M + P ++ +L AC + L +H V+
Sbjct: 91 WNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVV 150
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
G + D+ V N+L+ +Y + A ELF+ + R+ VS ++I G+++ G + AR
Sbjct: 151 ASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQART 210
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
LFD MP RD VSW ++ GY Q+ Q EA+++F M ++ D +VS ++ACA+LG
Sbjct: 211 LFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGA 270
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
LE G+ Y+ + I++D+F+ LVD Y+KCG I A+ +F+ ++ FTW A+++G
Sbjct: 271 LETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILG 330
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
LA++G G ++ F RM+ PD VT +G L C+HAGLVD+ R F M YG++
Sbjct: 331 LAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAP 390
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
+ H+GC+ DLLGRAG ++EALE I MPM + +W LL CR+HGN EI + AAEH+
Sbjct: 391 NVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHL 450
Query: 439 MKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++L E+G VY +L+++YA ++RWEDV ++R+ + IKK GCSLI++NG
Sbjct: 451 LELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNG 502
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 150/358 (41%), Gaps = 68/358 (18%)
Query: 109 PDFYSFPFLLRACSQLCSH-SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
PD Y+FP LL+A + ++ +H+ V+K G + V +SL+ +Y
Sbjct: 16 PDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMYAA--------- 66
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA---VSWGTLVAGYAQSDQC 224
GD A AR L D P R V W L++G+ +S Q
Sbjct: 67 ----------------------RGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQF 104
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
+ F +M+ + P + ++ LSAC + + G +H+ + + + D + L
Sbjct: 105 RLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNAL 164
Query: 285 VDFYAKCGYINTAIEIFESSQ-------------------------------EKNLFTWN 313
+D YA+C ++ A E+FE + E++ +W
Sbjct: 165 IDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWT 224
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
AM+ G G R +L F M ++++ D T++ + C+ G ++ M S
Sbjct: 225 AMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYM-SR 283
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+G+ + + D+ + G I++AL + K+M + D F W+ ++ G ++G+ E A
Sbjct: 284 HGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYI-RDKFTWTAVILGLAVNGHGEEA 340
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 140/352 (39%), Gaps = 40/352 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F+ +P T S+ +I + A+ +F +M+ + D ++ ++ AC+Q
Sbjct: 208 ARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQ 267
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + + + G D FV N+L+ +Y
Sbjct: 268 LGALETGEWARIYMSRHGIKMDTFVGNALVDMYS-------------------------- 301
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
K G + A +F M RD +W ++ G A + EEAI +F M+ + PD
Sbjct: 302 -----KCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDE 356
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE-IF 301
+ + L+AC G +++G++ + + + + G L+D + G + A+E I
Sbjct: 357 VTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIG 416
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
N W +L +HG + + ++E + V IL + + D
Sbjct: 417 NMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWED 476
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
R ME G+ KE GC L+ G I E + + PM +++
Sbjct: 477 VRRLRQVIMEK--GIKKE---PGC--SLIEMNGTIHEFIAGDRSHPMSKEIY 521
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 254/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ FS+N +I + ++ L +M + P + +L A
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS++ L + +H V + + + N+L++ Y + A +F + RDV+S
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 305
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+++ GYV+ G+L AR FD+MP RD +SW ++ GY ++ E++++F M +
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +VS L+ACA LG LE G+ I YI+ N+I+ D + L+D Y KCG A ++
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +++ FTW AM+VGLA +G G+ ++ F +M + I+PD +T LG L C+H+G+V
Sbjct: 426 FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMV 485
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ARK F +M S + + L HYGCM D+LGRAGL++EA E+++KMPM + VW LLG
Sbjct: 486 DQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLG 545
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
R+H + +AE AA+ +++L+P++G VY +L ++YA RW+D+ ++RR + IKK
Sbjct: 546 ASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKT 605
Query: 481 AGCSLIQLNG 490
G SLI++NG
Sbjct: 606 PGFSLIEVNG 615
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 197/467 (42%), Gaps = 83/467 (17%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CKT Q Q+H+ +T+G+ +P L+ S +SYA +F
Sbjct: 44 CKTTDQFKQLHSQSITRGV---APNPTFQKKLFVFWC--------SRLGGHVSYAYKLFV 92
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH-S 128
IP P +N +I+ + V L+ M + PD ++FPFLL + +
Sbjct: 93 KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ +H V+K G +++V N+L+ +Y + + A+ +FD DV S N +I GY
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY- 211
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+RM + EE+I+L M + P ++ L+
Sbjct: 212 ------------NRM------------------KEYEESIELLVEMERNLVSPTSVTLLL 241
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LSAC+++ + + K +H Y+ + L LV+ YA CG ++ A+ IF S + ++
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +W +++ G G +L+ YF +M + RI TI+ + G AG +E+ ++F
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRI---SWTIM--IDGYLRAGCFNESLEIF 356
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
EM+S AG+I + M+ +L C G+
Sbjct: 357 REMQS--------------------AGMIPDEFTMV-------------SVLTACAHLGS 383
Query: 428 VEIAEAAAEHVMKLK-PEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+EI E ++ K K D V L D+Y E K+ +D
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD 430
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 132/287 (45%), Gaps = 6/287 (2%)
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G +++A +LF ++P D V W ++ G+++ D E ++L+ NM+ + PD+
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 250 LSACARL-GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L+ R G L GK +H ++ + + ++ LV Y+ CG ++ A +F+ +++
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+F+WN M+ G S+ M + P VT+L L CS D +++
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH- 259
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
E S L+ + + G ++ A+ + + M DV W+ ++ G GN+
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNL 318
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
++A + ++ D + ++ D Y A + + ++I R + +
Sbjct: 319 KLART---YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 254/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ FS+N +I + ++ L +M + P + +L A
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS++ L + +H V + + + N+L++ Y + A +F + RDV+S
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 305
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+++ GYV+ G+L AR FD+MP RD +SW ++ GY ++ E++++F M +
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +VS L+ACA LG LE G+ I YI+ N+I+ D + L+D Y KCG A ++
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +++ FTW AM+VGLA +G G+ ++ F +M + I+PD +T LG L C+H+G+V
Sbjct: 426 FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMV 485
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ARK F +M S + + L HYGCM D+LGRAGL++EA E+++KMPM + VW LLG
Sbjct: 486 DQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLG 545
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
R+H + +AE AA+ +++L+P++G VY +L ++YA RW+D+ ++RR + IKK
Sbjct: 546 ASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKT 605
Query: 481 AGCSLIQLNG 490
G SLI++NG
Sbjct: 606 PGFSLIEVNG 615
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 197/467 (42%), Gaps = 83/467 (17%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CKT Q Q+H+ +T+G+ +P L+ S +SYA +F
Sbjct: 44 CKTTDQFKQLHSQSITRGV---APNPTFQKKLFVFWC--------SRLGGHVSYAYKLFV 92
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH-S 128
IP P +N +I+ + V L+ M + PD ++FPFLL + +
Sbjct: 93 KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ +H V+K G +++V N+L+ +Y + + A+ +FD DV S N +I GY
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY- 211
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+RM + EE+I+L M + P ++ L+
Sbjct: 212 ------------NRM------------------KEYEESIELLVEMERNLVSPTSVTLLL 241
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LSAC+++ + + K +H Y+ + L LV+ YA CG ++ A+ IF S + ++
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +W +++ G G +L+ YF +M + RI TI+ + G AG +E+ ++F
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRI---SWTIM--IDGYLRAGCFNESLEIF 356
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
EM+S AG+I + M+ +L C G+
Sbjct: 357 REMQS--------------------AGMIPDEFTMV-------------SVLTACAHLGS 383
Query: 428 VEIAEAAAEHVMKLK-PEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+EI E ++ K K D V L D+Y E K+ +D
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD 430
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 132/287 (45%), Gaps = 6/287 (2%)
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G +++A +LF ++P D V W ++ G+++ D E ++L+ NM+ + PD+
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 250 LSACARL-GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L+ R G L GK +H ++ + + ++ LV Y+ CG ++ A +F+ +++
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+F+WN M+ G S+ M + P VT+L L CS D +++
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH- 259
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
E S L+ + + G ++ A+ + + M DV W+ ++ G GN+
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNL 318
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
++A + ++ D + ++ D Y A + + ++I R + +
Sbjct: 319 KLART---YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 251/427 (58%), Gaps = 2/427 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F IP ++ TII + A++++ M + P+ L+ C +
Sbjct: 283 ARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGR 342
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + Q + S V+K+GF C F+ ++++H+Y R+ +A F +V S N L
Sbjct: 343 TMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNAL 402
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GYV+ + A +LF+ MP RD SW T+++GY Q++Q A++LF M+ IKP+
Sbjct: 403 IAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNE 462
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +VS LSA A G L++G+ H Y+ N I V LS ++D YAKCG IN A+E+F
Sbjct: 463 VTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYE 522
Query: 304 SQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+EK + WNA++ GLA+HG LSL FS + IK + +T +G L C H GLV+
Sbjct: 523 IREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVE 582
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
++ F M+S + + ++KHYGCM DLLGRAG +EEA EMI+ MPM DV +W LL
Sbjct: 583 SGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAA 642
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR HGNV++ E AAE++ +L+P G +L+++YA+A +WED +RR++ + ++++
Sbjct: 643 CRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQRLP 702
Query: 482 GCSLIQL 488
G S + L
Sbjct: 703 GYSGVAL 709
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 220/482 (45%), Gaps = 72/482 (14%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L YA +F+ +P SY T+I + AV LF QMR V + P+ + L+ A
Sbjct: 148 LDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSA 207
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
S + +H V+K+ F V V +L+ +YCV L +A+ LFDE+ +++VS
Sbjct: 208 YSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSW 267
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +++GY KAG + AR +F+R+P +D V+WGT++ GY + ++ EA+ ++ +M+ +
Sbjct: 268 NVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWE 327
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT---- 296
P+++ +V +S C R + +G+ + + F+ + ++ YA CG IN
Sbjct: 328 PNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQ 387
Query: 297 ---------------------------AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
A+E+F E+++F+W+ M+ G + L+L
Sbjct: 388 FRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLAL 447
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMAD 388
F +M+ + IKP+ VT++ L + +G + E R + + + VS L + D
Sbjct: 448 ELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLS--AAIID 505
Query: 389 LLGRAGLIEEALEMIKKM-PMGGDVFVWSGLLGGCRIHG--------------------- 426
+ + G I ALE+ ++ V W+ ++ G +HG
Sbjct: 506 MYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNA 565
Query: 427 -----------NVEIAEAAAEHVMKLKPE-----DGGVYKVLADVYANADRWEDVVKIRR 470
+V + E+ H M +K E D Y + D+ A R E+ ++ R
Sbjct: 566 ITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIR 625
Query: 471 SL 472
S+
Sbjct: 626 SM 627
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 217/524 (41%), Gaps = 91/524 (17%)
Query: 44 ITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR 103
I + KP S T P SY S ++ + ST I++ +F N + + +
Sbjct: 2 IPSSKPKSPLHFLITSPFSYPAS---SLKWVST----EILKIPQIFQQQENPFLHLNSLL 54
Query: 104 TVSIPPDFYSFPFLLRACSQLCSHSL----AQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
+++ +L + + CS L + IH V K G + F+ NSL+++Y
Sbjct: 55 NPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKC 114
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
L DA+ +FD D VS N +I GYVK+G L +A +LFD MP + VS+ T++ G++
Sbjct: 115 GLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFS 174
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
Q++ +A++LF M ++ + P+ + + + +SA + G + + +H +
Sbjct: 175 QNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVL 234
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR----- 334
+ST L+ Y C + A +F+ EKN+ +WN ML G + G + V F R
Sbjct: 235 VSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKD 294
Query: 335 --------------------------MIEARIKPDGVTILGALVGCSHAGLVDEARKL-- 366
MI A +P+ V ++ + GC + E ++L
Sbjct: 295 LVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLS 354
Query: 367 ---------FDEMESV-------------------YGVSKELKHYGCMADLLGRAGLIEE 398
+D ++S G + + + + R +I+
Sbjct: 355 AVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDR 414
Query: 399 ALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL-----KPEDGGVYKVLA 453
A+E+ +MP DVF WS ++ G + E A E K+ KP + + VL+
Sbjct: 415 AMELFNEMP-ERDVFSWSTMISG---YTQNEQPNLALELFHKMVASGIKPNEVTMVSVLS 470
Query: 454 DVYANAD----RW------EDVVKIRRSLDAGKIKKNAGCSLIQ 487
+ + RW + + + +L A I A C I
Sbjct: 471 AIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSIN 514
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/547 (33%), Positives = 294/547 (53%), Gaps = 67/547 (12%)
Query: 7 IKRCKTIKQIHQIHAHFL----------TKGLLFLSPCHILTTILYAITTF----KPISS 52
+++CKT K + Q+HAH L T+ +L + + TI YA++ F KP SS
Sbjct: 28 LQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESS 87
Query: 53 ASSPTTDPLSY------ALSIFNNIPYPST----FSYNTIIRAHTLFSSPLNAVVLFSQM 102
A + L++ AL +F + S F+++++++A S + A+ Q+
Sbjct: 88 AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA----CSRMKALREGEQV 143
Query: 103 RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----- 157
+ + F S F+ Q+ ++ + V + NS++ Y
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203
Query: 158 -----VFHRLRDAQELFDEI-----------------------------LYRDVVSCNTL 183
+F ++ + + FD++ L R+ +L
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G + AR+LFD M RD V+W +++GYAQ+D+C+EA+ LF M ++ P+
Sbjct: 264 IDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +VS L +CA LG E GK +H YI+ ++++ L T L+DFYAKCGYI+ ++E+F+
Sbjct: 324 VTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKE 383
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
KN+FTW A++ GLA +G G+++L +FS M+E +KP+ VT +G L CSHA LVD+
Sbjct: 384 MSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQG 443
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R LF+ M + + ++HYGCM D+LGRAG +EEA + I MP + VW LL CR
Sbjct: 444 RHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCR 503
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
H N+E+AE + EH+ +L+P G Y +L++ YA R ED +++R + +IKK GC
Sbjct: 504 AHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGC 563
Query: 484 SLIQLNG 490
SLI+L+G
Sbjct: 564 SLIELDG 570
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 275/486 (56%), Gaps = 26/486 (5%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + QI QIH H L KGL C+ILT ++ +T DP Y +
Sbjct: 60 CINLNQIKQIHGHVLRKGLD--QSCYILTKLIRTLTKL-------GVPMDP--YPRRVIE 108
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ + + F + +IR +T+ A+ ++ MR I P ++F LL+AC + +L
Sbjct: 109 PVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNL 168
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ H+Q +L C V+V N+++ +Y + A+++FDE+ RDV+S LI Y +
Sbjct: 169 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYAR 228
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G++ A LF+ +P +D V+W +V G+AQ+ + +EA++ F M I+ D + +
Sbjct: 229 VGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 288
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDS-----FLSTGLVDFYAKCGYINTAIEIFESS 304
+SACA+LG K R +++ Q S + + L+D Y+KCG + A+ +F S
Sbjct: 289 ISACAQLGA---SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSM 345
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEA 363
KN+F++++M++GLA HG + +L F M+ + IKP+ VT +GAL CSH+GLVD+
Sbjct: 346 NNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQG 405
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM---PMGGDVFVWSGLLG 420
R++F M +GV HY CM DLLGRAG ++EALE+IK M P GG VW LLG
Sbjct: 406 RQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGG---VWGALLG 462
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIH N +IAE AAEH+ +L+P+ G Y +L++VY++A W V+ +R+ + +KK
Sbjct: 463 ACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKT 522
Query: 481 AGCSLI 486
S +
Sbjct: 523 PAVSWV 528
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 264/430 (61%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L YA +F+ + S+N++I ++ + + LF+ MR ++ D + ++ A
Sbjct: 208 LGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILA 267
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS LC + ++ + DV++ NSL+ +Y + A+ +FD + +++VS
Sbjct: 268 CSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSW 327
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ GY AGDL A++LF+ MP R+ +SW +++G AQ++QC +A++LF MMD ++K
Sbjct: 328 NAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVK 387
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I + S LSAC+ LG L+ G+ +H Y+ + I+ D ++ L+D Y KCG ++ A+E+
Sbjct: 388 PDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEV 447
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F ++K+ +W +M++GLA++G FS+M+ ++P + +G L+ C+HAGLV
Sbjct: 448 FHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLV 507
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F+ ME VYG+ E+KHYGC+ DLL R+G ++ A E IK+MP+ DV +W LL
Sbjct: 508 DKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLS 567
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C++H N+ +AE A +++L P + G Y +L++ YA +DRW+D ++R + G ++K
Sbjct: 568 ACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQKP 627
Query: 481 AGCSLIQLNG 490
+ S I++ G
Sbjct: 628 SSWSSIEVIG 637
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 202/434 (46%), Gaps = 76/434 (17%)
Query: 62 SYALS---------IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ-MRTVSIPPDF 111
SYALS F I P+ +N +IR + +P A+V++S M I D
Sbjct: 98 SYALSRSHLNKANFAFIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDN 157
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
+F +L +ACS++ Q H QVLKLGF +F+ NSL+ +Y F L AQ++FD+
Sbjct: 158 LTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDK 217
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+ RD+VS N+LI GY+Q ++ +E + LF
Sbjct: 218 MDDRDLVSWNSLI-------------------------------CGYSQCNRFKEVLDLF 246
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M + ++ D++ +V + AC+ L E ++ +YIE + +D +L L+D Y +
Sbjct: 247 NLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRR 306
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHG----LGRL-------------------- 327
G ++ A +F+ QEKN+ +WNAML G A G +L
Sbjct: 307 GLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCA 366
Query: 328 -------SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKEL 380
+L F M++A +KPD +T+ L CSH GL+D + + + M + + ++
Sbjct: 367 QANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYM-CRHDIKSDV 425
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK 440
+ D+ + G++++ALE+ M D W+ ++ G ++G V+ +++
Sbjct: 426 YVGNALIDMYCKCGVVDKALEVFHDMK-KKDSVSWTSMILGLAVNGFVDNVFELFSQMLR 484
Query: 441 --LKPEDGGVYKVL 452
L+P G +L
Sbjct: 485 DGLQPTHGSFIGIL 498
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 38/318 (11%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
T L A +FN +P + S+ +I + +A+ LF +M ++ PD +
Sbjct: 336 TAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSS 395
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L ACS L QT+H + + DV+V N+L+ +YC
Sbjct: 396 VLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYC------------------- 436
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
K G + A ++F M +D+VSW +++ G A + + +LF M+
Sbjct: 437 ------------KCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLR 484
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYIN 295
++P + + + L AC G +++G +E + +R + +VD ++ G ++
Sbjct: 485 DGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELD 544
Query: 296 TAIE-IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A E I + ++ W +L +H L+ + S+++E G + L+
Sbjct: 545 RAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYV---LLSN 601
Query: 355 SHAG--LVDEARKLFDEM 370
++AG D+A ++ D M
Sbjct: 602 TYAGSDRWDDASRMRDLM 619
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 284/542 (52%), Gaps = 83/542 (15%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+ + ++HA L GL L P + K +SS + P S +F + P
Sbjct: 37 LHHLQELHAQLLKHGL-HLDP----------VAASKLLSSYALHRRLPASRG--VFASFP 83
Query: 73 YP--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P +TF NT++RA+ L + P AV +FS M D +++ FL++A S L
Sbjct: 84 NPHATTFLPNTLLRAYALNALPREAVAVFSAMPHR----DSFTYSFLIKALSSAGVAPL- 138
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRL--RD-------------- 164
+ +HS V+KLG I D +V N+L+ Y VF + RD
Sbjct: 139 RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQ 198
Query: 165 -----AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY- 218
A+ +FDE+L +D VS NTL+DGY KAGD+ A +LF MP R+ VSW T+V+GY
Sbjct: 199 GEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYC 258
Query: 219 ------------------------------AQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
AQ+ EEA +LF M + ++ D A+VS
Sbjct: 259 KKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVS 318
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS-QEK 307
L+ACA G L GK IHRY+ Q+ + + L+D + KCG IN A +F++ EK
Sbjct: 319 ILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEK 378
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +WN ++ G AMHG G +L +F++M PD VT++ L C+H G V+E R+ F
Sbjct: 379 DSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYF 438
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
ME YGV +++HYGCM DLLGR GLI+EA+++IK MP + +W LL CR+H N
Sbjct: 439 ANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKN 498
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
VE AE A + KL+P + G Y VL+ +YA A +W D+ K R + +K++G S I+
Sbjct: 499 VEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWIE 558
Query: 488 LN 489
L+
Sbjct: 559 LD 560
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 283/504 (56%), Gaps = 27/504 (5%)
Query: 1 MTLNN----FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSP 56
+ LNN ++RC + + Q+ A +T G T YA + + A S
Sbjct: 52 LNLNNSVLALLERCIHLNHLKQLQAFLITLGHA--------QTHFYAFKLLRFCTLALSN 103
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFP 115
LSYA IF+++ P+ + Y +I A+ S +A++L+ M P P+ + +P
Sbjct: 104 ----LSYARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYP 159
Query: 116 FLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR-LRDAQELFDEILY 174
+L++C+Q+ A+ +H QVL+ GF V +L+ Y F + A+ LFDE+
Sbjct: 160 HVLKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTE 219
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
R+VVS +I GY + G + +A LF+ MP RD SW L+AGY Q+ EA+ LF M
Sbjct: 220 RNVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRM 279
Query: 235 MDLDI-------KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+ ++ +P+ + V +LSAC G L GK IH Y+ N + +DSF+S LVD
Sbjct: 280 IAVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDM 339
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGV 345
Y KCG + A +F+ + E++L +WN+M+ LA+HG + ++ F M+ + +KPD V
Sbjct: 340 YGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEV 399
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T +G L C+H GLV++ F+ M YG+ +++HYGC+ DLLGRAG EEA+E+++
Sbjct: 400 TFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRG 459
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
M + D +W LL GC+IHG+ ++AE + + ++ + P +GG +LA++Y +W++V
Sbjct: 460 MRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEV 519
Query: 466 VKIRRSLDAGKIKKNAGCSLIQLN 489
K+R+ L K GCS I+++
Sbjct: 520 RKVRKVLKEQNAHKTPGCSWIEID 543
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 250/431 (58%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ ++ T+I + A+ +F M + P+ + ++ A
Sbjct: 308 LKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSA 367
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS + + + + +H +V + C + + N+L+ +Y L DA+ELFD + +DV S
Sbjct: 368 CSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSW 427
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++++GY K GDL AR+ FD+ P ++AV W ++AGY+Q+++ +E+++LF MM+ +
Sbjct: 428 TSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVV 487
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQI-RVDSFLSTGLVDFYAKCGYINTAIE 299
P LVS LSAC +L L G IH+Y + +I + L +VD YAKCG I+ A E
Sbjct: 488 PIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATE 547
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F + E+NL +WN M+ G A +G + ++ F +M +P+ +T + L CSH GL
Sbjct: 548 VFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGL 607
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+ E R+ FD ME YG+ E HY CM DLLGR GL+EEA ++I MPM W LL
Sbjct: 608 ISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALL 667
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+HGNVE+A +A ++++L PED G+Y +LA+ AN +W DV ++R + +KK
Sbjct: 668 NACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKK 727
Query: 480 NAGCSLIQLNG 490
G SLI+++G
Sbjct: 728 IPGYSLIEIDG 738
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 204/460 (44%), Gaps = 82/460 (17%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C T++Q+ QI A G+ I +A + I+ + + L YA +
Sbjct: 164 MESCSTMRQLKQIQARMTLTGI-----------ITHAFPVSRVIAFCALAHSGDLHYAHT 212
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IFN + P+TF +NT+IR + P+ A F M + + D SF F L+AC Q +
Sbjct: 213 IFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFET 272
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
++++ V K+GF C++ V N L+H Y
Sbjct: 273 VFEGESVYCVVWKMGFDCELLVRNGLIHFY------------------------------ 302
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
+ G L +ARQ+FD +D V+W T++ GYA D EEA+++F M+ ++P+ + L
Sbjct: 303 -AERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTL 361
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRV------------------------------ 276
++ +SAC+ +G LE GK +H +E +R
Sbjct: 362 IAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMAT 421
Query: 277 -DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
D + T +V+ YAKCG + +A F+ + KN W+AM+ G + + + SL F M
Sbjct: 422 KDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEM 481
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK----ELKHYGCMADLLG 391
+E + P T++ L C ++ L D + + V K + + D+
Sbjct: 482 MERGVVPIEHTLVSVLSACGQLTCLN----LGDWIHQYFVVGKIIPLSVTLENAIVDMYA 537
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G I+ A E+ MP ++ W+ ++ G +G + A
Sbjct: 538 KCGSIDAATEVFSTMP-ERNLISWNTMIAGYAANGRAKQA 576
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 259/422 (61%), Gaps = 14/422 (3%)
Query: 82 IIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLG 141
+IR H+ +P V L+++M P+ +++ FL+ C++ + +H +V+ G
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 142 FICDVFVLNSLMHVYCV---FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
+ +VFV SL+++Y + + +R A+ +FDEI+ R++VS N+L+ GYV+ GD+ AR+
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+FD MP R+ VSW T++AG AQ +C++A+ LF M +K D +ALV+ALSACA LG+
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 259 LEQGKNIHRYIEL-----NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
L+ G IH YI+ NQ + S L+ L+ YA CG I+ A ++F Q+++ +W
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVS-LNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWT 239
Query: 314 AMLVGLAMHGLGRLSLVYF---SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+M+ G A G +L F R+ +PDG+T +G L CSHAG VD+ R F+ M
Sbjct: 240 SMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECM 299
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+G+ ++HYGCM DLL RAG ++EA +I+ MPM + VW LLGGCRIH N E+
Sbjct: 300 NKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAEL 359
Query: 431 AEAAAEHV-MKLKPEDGGVYKV-LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
A A+ + ++LKP+ Y V L++VYA A RW+DV +R+ + ++K AG S +Q+
Sbjct: 360 ASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQI 419
Query: 489 NG 490
NG
Sbjct: 420 NG 421
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ +P + S+ T+I A+ LF +MR + D + L AC++
Sbjct: 118 ARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAE 177
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L L IHS + + + +L SL N+L
Sbjct: 178 LGDLKLGTWIHSYIDERLHAGNQPLLVSLN---------------------------NSL 210
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL---DIK 240
I Y G + A ++F M R +SW +++ G+A+ EEA+ +F M L + +
Sbjct: 211 IHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGR 270
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD I + L AC+ G ++QG++ + V G +VD ++ G+++ A
Sbjct: 271 PDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHR 330
Query: 300 IFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+ ES K N W A+L G +H L+ + ++ + +KPD
Sbjct: 331 LIESMPMKPNDAVWGALLGGCRIHKNAELA-SHVAQKLALELKPD 374
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 266/459 (57%), Gaps = 39/459 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM----RTVSIPPDFYSFPF 116
+++A +F+ IP P F YNT+IR ++P +AV L+++M + PD +FPF
Sbjct: 28 IAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPF 87
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSL--MHVYC--------VFH-RLRD- 164
+LRAC+ + + +H+ V+K G D FV N+L MH C +F R R+
Sbjct: 88 VLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRARED 147
Query: 165 -------------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
A++LFDE +D+VS N +I Y K GD+A AR+LFD++P
Sbjct: 148 AVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPE 207
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
RD VSW +++GY + A++LF M + KPD + ++S LSACA G+L+ G+ +
Sbjct: 208 RDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRL 267
Query: 266 HRYIELNQIRVDSF---LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
H + + + F L L+D YAKCG + +A E+F S ++K++ TWN+++ GLA+H
Sbjct: 268 HSSLS-DMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALH 326
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G S+ F +M++ +++PD +T + L+ CSH G+VD+ R+ F+ M+ Y V +KH
Sbjct: 327 GHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKH 386
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
YGCM D+LGRAGL++EA E I M + +W LL CR+HG +E+A+ A ++K +
Sbjct: 387 YGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKAR 446
Query: 443 PEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
++ G Y +L+++YA+ W K+R+ +D + K A
Sbjct: 447 NDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEA 485
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 16/249 (6%)
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM----DLDIKPDNIAL 246
G +AHA +FD++P D + TL+ G A + +A+ L+ M+ ++PD +
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
L AC +G + G +H ++ D+F+ L+ +A CG + A +F+
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ W+AM+ G A G + F E +K D V+ + + G + AR+L
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFD---ECPVK-DLVSWNVMITAYAKRGDMALAREL 201
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCR 423
FD++ +++ + M R G ALE+ ++M G D+ LL C
Sbjct: 202 FDQVP-----ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACA 256
Query: 424 IHGNVEIAE 432
G++++ +
Sbjct: 257 DSGDLDVGQ 265
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 277/496 (55%), Gaps = 21/496 (4%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP-- 60
L ++C T+ Q+ Q+HAH L C I T YA+ P+ S + + D
Sbjct: 8 LTTVAQKCNTLTQLKQLHAHILR--------CRINDTP-YALA---PLLSVLATSNDASF 55
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
SYA SIF ++ +TF +NT+IR + SPL+AV + M + + Y+FP L++A
Sbjct: 56 FSYARSIFRHLTNRNTFMHNTMIRGYLQCRSPLHAVSCYLSMLQNGVAVNNYTFPPLIKA 115
Query: 121 CSQLCSHS----LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
C L S + + +H V+K G D +V+++ + Y V + A+ LFDE Y+D
Sbjct: 116 CIALLPSSPSNIVGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSYKD 175
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
VV ++DGY K G++ AR++FD+MP R+AVSW ++A Y++ +E + LF M +
Sbjct: 176 VVLGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQN 235
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+P+ LV+ L+ACA LG L QG +H Y + + L+T LVD Y+KCG + +
Sbjct: 236 EGTEPNESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPILATALVDMYSKCGCVES 295
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A+ +F+ +K+ WNAM+ G A++G SL F +M +R KP+ T + L C+H
Sbjct: 296 ALSVFDCIVDKDAGAWNAMISGEALNGDAGKSLQLFRQMAASRTKPNETTFVAVLTACTH 355
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG---GDVF 413
A +V + LF+EM SVYGV ++HY C+ DLL RAG++EEA + +++ G GD
Sbjct: 356 AKMVQQGLWLFEEMSSVYGVVPRMEHYACVIDLLSRAGMVEEAEKFMEEKMGGLTAGDAN 415
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LL CRIH N+ + + ++ + D G + + ++Y A + K+R ++
Sbjct: 416 VWGALLNACRIHKNIHVGNRVWKKLVDMGVTDCGTHVLTYNIYREAGWDVEANKVRSRIE 475
Query: 474 AGKIKKNAGCSLIQLN 489
+KK GCS+I+++
Sbjct: 476 EVGMKKKPGCSIIEVD 491
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 243/396 (61%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ F M + + D L AC+ L ++ + IHS LK+G + + N+L++
Sbjct: 360 AIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIY 419
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+Y + A++LFDE D++S N++I GY+K + +A+ +FD MP +D VSW ++
Sbjct: 420 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 479
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI 274
++GYAQ+D +E + LF M KPD LVS +SACARL LEQGK +H YI+ N +
Sbjct: 480 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 539
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
++ L T L+D Y KCG + TA+E+F EK + TWNA+++GLAM+GL SL FS
Sbjct: 540 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 599
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M + + P+ +T +G L C H GLVDE + F M + + +KHYGCM DLLGRAG
Sbjct: 600 MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAG 659
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLAD 454
++EA E++ +MPM DV W LLG C+ HG+ E+ +++L+P+ G + +L++
Sbjct: 660 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 719
Query: 455 VYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+YA+ +W+DV++IR + ++ K GCS+I+ NG
Sbjct: 720 IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANG 755
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 192/408 (47%), Gaps = 64/408 (15%)
Query: 84 RAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI 143
RA+ +SP A L+ M + + D Y++P L++ACS S A+ +H+ VLKLGF
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 144 CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRM 203
DV+V N+L++ + V + DA +F+E D VS N+++ GY++ G++ A+ ++ +M
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 204 PFR-------------------------------DAVSWGTLVAGYAQSDQCEEAIQLFC 232
P R D V+W L+A + Q++ EEAI+ F
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIH---------RYIELNQIRVDSFLSTG 283
M + + D + VSALSACA L + GK IH YI L + + G
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 425
Query: 284 ----------------------LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
++ Y KC ++ A IF+S EK++ +W++M+ G A
Sbjct: 426 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQ 485
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
+ L +L F M + KPD T++ + C+ +++ + + ++ G++ +
Sbjct: 486 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR-NGLTINVI 544
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ D+ + G +E ALE+ M G + W+ L+ G ++G VE
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGMIEKG-ISTWNALILGLAMNGLVE 591
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 248/411 (60%), Gaps = 31/411 (7%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
N++IR +T + L++V +++QM I PD +FP +L++ +QLC L + IH +++
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQ 170
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
+GF +V+V +L+++Y +C+++ D ARQ+
Sbjct: 171 MGFESNVYVSTALVNMYG---------------------TCSSVSD----------ARQV 199
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
FD +P R+ VSW L+ GY + + I +F M KP + +V L ACA LG L
Sbjct: 200 FDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGAL 259
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
QG+ I YI+ N++R++ F+ T L+D YAKCG ++ A +IF++ + KN++TWN ++ G
Sbjct: 260 NQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGY 319
Query: 320 AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
AM+G G +L FSRMI + KPD VT LG L C H GLV+E R F M+ +G+
Sbjct: 320 AMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPR 379
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM 439
++HYGCM DLLGRAG ++EA ++I+ M M D +W LLG CRIHGN+++ E A + ++
Sbjct: 380 IEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLL 439
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+L+P +G Y +LA++YA RW+ V ++R +D +++K GCS I+++
Sbjct: 440 ELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDN 490
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 137/266 (51%), Gaps = 5/266 (1%)
Query: 183 LIDGYVKAGDLAHARQLFDRM-PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
LID V + A + LF + F D+ +++ Y S++ ++ ++ M I P
Sbjct: 81 LIDFSVSSHGFAASALLFTQFYGFIDSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFP 140
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D+ + L + A+L E GK IH I + ++ST LV+ Y C ++ A ++F
Sbjct: 141 DSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVF 200
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ ++N+ +WNA++ G + + R + F M A KP VT++G L+ C+H G ++
Sbjct: 201 DEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALN 260
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ R + D ++ + + + D+ + G+++EA ++ K M + +V+ W+ L+ G
Sbjct: 261 QGRWIDDYIDH-NRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRV-KNVYTWNVLISG 318
Query: 422 CRIHGNVEIA-EAAAEHVM-KLKPED 445
++G E A +A + +M K KP++
Sbjct: 319 YAMNGRGESALQAFSRMIMEKFKPDE 344
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 118/285 (41%), Gaps = 37/285 (12%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
T +S A +F+ IP + S+N +I + + +F +M+ P +
Sbjct: 189 TCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVG 248
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L AC+ L + + + I + +VFV +L+ +Y + +A+++F + ++
Sbjct: 249 VLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKN 308
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V + N LI GY G + E A+Q F M+
Sbjct: 309 VYTWNVLISGYAMNG-------------------------------RGESALQAFSRMIM 337
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGY 293
KPD + + L AC G + +G+ ++ + R++ + +VD + G+
Sbjct: 338 EKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHY--GCMVDLLGRAGF 395
Query: 294 INTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
++ A ++ ++ S + + W +L +HG +L +++E
Sbjct: 396 LDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLE 440
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/430 (36%), Positives = 255/430 (59%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F++IP + S+ II + A+ +F ++ +++ PD ++ +L A
Sbjct: 163 LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL + + IH ++++G + +VFV SL
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSL---------------------------- 254
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+D Y K G++ AR +FD MP +D VSWG ++ GYA + +EAI LF M ++K
Sbjct: 255 ---VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVK 311
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +V LSACARLG LE G+ + ++ N+ + L T L+D YAKCG ++ A E+
Sbjct: 312 PDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEV 371
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +EK+ WNA++ GLAM+G ++S F ++ + IKPDG T +G L GC+HAGLV
Sbjct: 372 FKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLV 431
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE R+ F+ M + ++ ++HYGCM DLLGRAGL++EA ++I+ MPM + VW LLG
Sbjct: 432 DEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLG 491
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIH + ++AE A + +++L+P + G Y +L+++Y+ +W++ K+R S++ +I+K
Sbjct: 492 ACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKP 551
Query: 481 AGCSLIQLNG 490
GCS I+++G
Sbjct: 552 PGCSWIEVDG 561
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 11/257 (4%)
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
D + R LF ++ + W T++ G +D ++AI+ + M P+N L
Sbjct: 61 DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLK 120
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
ACARL +L+ G IH + D F+ T LV YAKCGY+ A ++F+ +KN+ +
Sbjct: 121 ACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVS 180
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR---KLFD 368
W A++ G G R ++ F R++E + PD TI+ L C+ G ++ K
Sbjct: 181 WTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM 240
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
EM G+ + + + D+ + G +E+A + MP D+ W ++ G ++G
Sbjct: 241 EM----GMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE-KDIVSWGAMIQGYALNG-- 293
Query: 429 EIAEAAAEHVMKLKPED 445
+ + A + ++++ E+
Sbjct: 294 -LPKEAIDLFLQMQREN 309
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 243/396 (61%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ F M + + D L AC+ L ++ + IHS LK+G + + N+L++
Sbjct: 225 AIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIY 284
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+Y + A++LFDE D++S N++I GY+K + +A+ +FD MP +D VSW ++
Sbjct: 285 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 344
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI 274
++GYAQ+D +E + LF M KPD LVS +SACARL LEQGK +H YI+ N +
Sbjct: 345 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 404
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
++ L T L+D Y KCG + TA+E+F EK + TWNA+++GLAM+GL SL FS
Sbjct: 405 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 464
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M + + P+ +T +G L C H GLVDE + F M + + +KHYGCM DLLGRAG
Sbjct: 465 MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAG 524
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLAD 454
++EA E++ +MPM DV W LLG C+ HG+ E+ +++L+P+ G + +L++
Sbjct: 525 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 584
Query: 455 VYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+YA+ +W+DV++IR + ++ K GCS+I+ NG
Sbjct: 585 IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANG 620
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 64/431 (14%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ Y IFN I + F +N +IRA+ +SP A L+ M + + D Y++P L++A
Sbjct: 28 IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS S A+ +H+ VLKLGF DV+V N+L++ + V + DA +F+E D VS
Sbjct: 88 CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFR-------------------------------DAV 209
N+++ GY++ G++ A+ ++ +MP R D V
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMV 207
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH--- 266
+W L+A + Q++ EEAI+ F M + + D + VSALSACA L + GK IH
Sbjct: 208 TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLS 267
Query: 267 ------RYIELNQIRVDSFLSTG----------------------LVDFYAKCGYINTAI 298
YI L + + G ++ Y KC ++ A
Sbjct: 268 LKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAK 327
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
IF+S EK++ +W++M+ G A + L +L F M + KPD T++ + C+
Sbjct: 328 AIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLA 387
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+++ + + ++ G++ + + D+ + G +E ALE+ M G + W+ L
Sbjct: 388 ALEQGKWVHAYIKR-NGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG-ISTWNAL 445
Query: 419 LGGCRIHGNVE 429
+ G ++G VE
Sbjct: 446 ILGLAMNGLVE 456
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 262/431 (60%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F I S+N++I SP A+ LF +M + + + +L A
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ + + + S + + ++ + N+++ +Y + DA+ LFD + +D V+
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
T++DGY + D AR++ + MP +D V+W L++ Y Q+ + EA+ +F + + ++
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
K + I LVS LSACA++G LE G+ IH YI+ + IR++ +++ L+ Y+KCG + + E
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F S +++++F W+AM+ GLAMHG G ++ F +M EA +KP+GVT CSH GL
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDEA LF +MES YG+ E KHY C+ D+LGR+G +E+A++ I+ MP+ VW LL
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C+IH N+ +AE A +++L+P + G + +L+++YA +WE+V ++R+ + +KK
Sbjct: 542 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 601
Query: 480 NAGCSLIQLNG 490
GCS I+++G
Sbjct: 602 EPGCSSIEIDG 612
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 221/455 (48%), Gaps = 77/455 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I+RC +++Q+ Q H H + G F P + L+A+ +S L YA
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGT-FSDP--YSASKLFAMAALSSFAS--------LEYA 83
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQ 123
+F+ IP P++F++NT+IRA+ P+ ++ F M + S P+ Y+FPFL++A ++
Sbjct: 84 RKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAE 143
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S SL Q++H +K DVFV NSL+H Y L A ++F I +DVVS N++
Sbjct: 144 VSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 203
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+G+V+ G ++A++LF M D+K +
Sbjct: 204 INGFVQKGSP-------------------------------DKALELFKKMESEDVKASH 232
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +V LSACA++ LE G+ + YIE N++ V+ L+ ++D Y KCG I A +F++
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 304 SQEKNLFTWNAMLVGLAM-------------------------------HGLGRLSLVYF 332
+EK+ TW ML G A+ +G +L+ F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 333 SRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
+ ++ +K + +T++ L C+ G ++ R + ++ +G+ + +
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYS 411
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ G +E++ E+ + DVFVWS ++GG +HG
Sbjct: 412 KCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/427 (39%), Positives = 253/427 (59%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F++I + S+N++I + + A +LF +MR + PD ++F LL CSQ
Sbjct: 142 ARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQ 201
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H + G D+ V N+L+ +Y L AQ +FD ++VVS ++
Sbjct: 202 SRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSM 261
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I Y + G + ARQ+FD+MP ++ VSW ++++ Y + Q EA+ LF M + + PD
Sbjct: 262 ISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDE 321
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVS L+AC++LG+L GK IH YI N+ L L+D YAKCG + TA++IF
Sbjct: 322 ATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLE 381
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
KNL +WN ++ LA+HG G ++ F M PD +T+ G L CSH+GLVD
Sbjct: 382 MPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 441
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
FD M +Y V +E++HY CM DLLGR GL+ EA+E+I +MPM DV VW LLG CR
Sbjct: 442 LYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACR 501
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
IHGNVEI + + +++L+P GG+Y +++++Y A RWEDV KIR+ + IKK
Sbjct: 502 IHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAI 561
Query: 484 SLIQLNG 490
S I+++G
Sbjct: 562 SSIEIDG 568
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 204/418 (48%), Gaps = 70/418 (16%)
Query: 43 AITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM 102
+T K IS + L YA +F+ IP P+ F YN++IR ++ P++AV+LF +M
Sbjct: 20 TLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRM 79
Query: 103 RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRL 162
+ P+ ++ PF+L+AC ++ A +H +KLG VFV N+L+ VY V +
Sbjct: 80 ICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLI 139
Query: 163 RDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
A++LFD+I + +VS N++I GY G+ A LF +M WG
Sbjct: 140 HCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMR-----EWG---------- 184
Query: 223 QCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
++PD V+ LS C++ +L+ G+ +H IE+ +++D +
Sbjct: 185 ----------------MEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRN 228
Query: 283 GLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH-------------------- 322
LVD YAKCG +++A IF+ +QEKN+ +W +M+ A H
Sbjct: 229 ALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVS 288
Query: 323 -----------GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM- 370
G R +L F++M +R+ PD T++ L CS G + +K+ + +
Sbjct: 289 WNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYIL 348
Query: 371 --ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ YGV+ Y + D+ + G + AL++ +MP G ++ W+ ++G +HG
Sbjct: 349 SNKGAYGVTL----YNSLIDMYAKCGPVVTALDIFLEMP-GKNLVSWNVIIGALALHG 401
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 37/292 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A IF+ +P + S+N++I + A+ LF++MR + PD + +L A
Sbjct: 271 IEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAA 330
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CSQL + + IH+ +L + + LY
Sbjct: 331 CSQLGDLVMGKKIHNYILS-------------------------NKGAYGVTLY------ 359
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LID Y K G + A +F MP ++ VSW ++ A EAI+LF M
Sbjct: 360 NSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTL 419
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQI-RVDSFLS--TGLVDFYAKCGYINTA 297
PD I L LSAC+ G ++ G ++ + + I RV + +VD + G + A
Sbjct: 420 PDEITLTGLLSACSHSGLVDMG--LYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEA 477
Query: 298 IEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
IE+ K ++ W A+L +HG + +++E G+ +L
Sbjct: 478 IELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVL 529
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 264/473 (55%), Gaps = 38/473 (8%)
Query: 51 SSASSPTTDPLSY--ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
S A+ T LS+ +L +F+ + P+ F +N +I+ + P A++L+ +M
Sbjct: 76 SYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSR 135
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
P+ Y++P +L+ACS + +H+ ++K G D +L+S + +Y F RL +A+ +
Sbjct: 136 PNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRI 195
Query: 169 FDEILYR-DVVSCNTLIDGYVKAGDLAHARQLFDRMP----------------------- 204
D+ D V N +IDGY++ G++ AR+LF+ MP
Sbjct: 196 LDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEV 255
Query: 205 ---------FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
RD +SW ++ GY Q EA+++F M I+P L S LSACA
Sbjct: 256 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 315
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
LG L+QG+ IH Y + N I++D L T LVD YAKCG I+ A E+FE K + +WNAM
Sbjct: 316 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 375
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
+ GLAMHG ++ FS+M I P+ +T +G L C+H GLV + +F+ M YG
Sbjct: 376 IGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 432
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
V +++HYGC+ DLLGRAGL+ EA +++ +P VW LLG CR HGNVE+ E
Sbjct: 433 VEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVG 492
Query: 436 EHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ +++L+P++ G Y +L+++YA A RWE+V ++R+ + IK G S+I L
Sbjct: 493 KILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 545
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 255/427 (59%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F++I + S+N++I ++ A++LF +M + + D ++ LL A S+
Sbjct: 191 ARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSK 250
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
C+ L + +H ++ G D V N+L+ +Y L+ A+ +FD++L +DVVS ++
Sbjct: 251 HCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSM 310
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
++ Y G + +A Q+F+ MP ++ VSW +++ Q Q EA++LF M + PD+
Sbjct: 311 VNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDD 370
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVS LS C+ G+L GK H YI N I V L L+D YAKCG + TAI+IF
Sbjct: 371 ATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFG 430
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
EKN+ +WN ++ LA+HG G ++ F M + + PD +T G L CSH+GLVD
Sbjct: 431 MPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMG 490
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R FD M S + +S ++HY CM DLLGR G + EA+ +I+KMP+ DV VW LLG CR
Sbjct: 491 RYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACR 550
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
I+GN+EIA+ + +++L + G+Y +L+++Y+ + RW+D+ KIR+ +D IKK
Sbjct: 551 IYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAI 610
Query: 484 SLIQLNG 490
S I+++G
Sbjct: 611 SFIEIDG 617
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 215/457 (47%), Gaps = 79/457 (17%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL++ + +C ++K++ +HA + GL + T + S D L
Sbjct: 41 TLHHLLDQCSSMKRLKLVHAQIILHGLA------------AQVVTLGKLLSLCVQEGD-L 87
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA +F+ IP P+ F YN +IR ++ + P+ +++LF QM + P+ ++FPF+L+AC
Sbjct: 88 RYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKAC 147
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + A +H+Q +KLG V N+++ Y + A+++FD+I R +VS N
Sbjct: 148 AAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWN 207
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++I GY K G C+EAI LF M+ L ++
Sbjct: 208 SMIAGYSKMG-------------------------------FCDEAILLFQEMLQLGVEA 236
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY-------- 293
D LVS LSA ++ L+ G+ +H YI + + +DS ++ L+D YAKCG+
Sbjct: 237 DVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVF 296
Query: 294 -----------------------INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
+ A++IF KN+ +WN+++ L G ++
Sbjct: 297 DQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVE 356
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADL 389
F RM + + PD T++ L CS+ G + ++ + +++ VS L + + D+
Sbjct: 357 LFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCN--SLIDM 414
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ G ++ A+++ MP +V W+ ++G +HG
Sbjct: 415 YAKCGALQTAIDIFFGMP-EKNVVSWNVIIGALALHG 450
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 283/483 (58%), Gaps = 14/483 (2%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
RC T++++ QIHA+ + GL I + + ++ + +D +YA +F
Sbjct: 34 RCSTMRELKQIHANLIKTGL-----------ISDTVAASRVLAFCCASPSDR-NYAYLVF 81
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLLRACSQLCS 126
I + + F +NTIIR + S P A+ +F M + S+ P ++P + +A + L
Sbjct: 82 TRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGL 141
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H +V+K G D F+ N+++H+Y L +A LF ++ DVV+ N++I G
Sbjct: 142 ARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMG 201
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
K G + A++LFD MP R+ VSW ++++G+ ++ + ++A+++F M + D+KPD +
Sbjct: 202 LAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTM 261
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS L+ACA LG EQG+ IH+YI N+ ++S + T L+D Y KCG +++FE +
Sbjct: 262 VSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPT 321
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K L WN+M++GLA +G ++ F + ++PD V+ +G L C+H+G V +A +
Sbjct: 322 KQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEF 381
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M Y + +KHY CM ++LG AGL++EA +IKKMP+ GD +WS LL CR +G
Sbjct: 382 FRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNG 441
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NVE+A+ AA + L P++ Y ++++ YA+ +E+ V+ R + +++K GCS I
Sbjct: 442 NVEMAKRAANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Query: 487 QLN 489
+++
Sbjct: 502 EVD 504
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 258/485 (53%), Gaps = 15/485 (3%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
RC ++ + Q+HA + GL I + ++ + P D +SYA +
Sbjct: 42 RCASMAHLRQLHAALVKSGL-----------AKDPIAASRAVAFCAGPGRD-VSYAERLV 89
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ P P++F +NT+IRA + + P AV LF M PP+ + P LL A ++L
Sbjct: 90 RHHPRPNSFMWNTVIRALSDGARPEAAVALFVDMLGSPTPPERRTLPSLLAAYARLGRAG 149
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H LKLG D +V N+ + +Y R +A LF + D V+CN+ I
Sbjct: 150 DGAALHGMALKLGLAGDAYVRNATIAMYASCARADEALALFGQCPEFDAVACNSAIVALA 209
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+AG + AR +FD MP R +W +V+ YA++ +C EA+ LF M ++P+ LVS
Sbjct: 210 RAGRVDEARAVFDGMPERTVATWSAMVSAYARAARCGEALALFSAMQADGVEPNANVLVS 269
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L CA LG L+QG +H YI+ + + +++ + T LVD Y KCG ++ A ++F++++ +
Sbjct: 270 VLGCCASLGALDQGAWVHAYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQG 329
Query: 309 ---LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
L +WN+M+ GLA+HG R ++ FS + + PD VT + L HAG+ DEA+
Sbjct: 330 SAKLSSWNSMMQGLAVHGQWREAVALFSELRSYGLSPDNVTFIAVLTAYGHAGMPDEAQA 389
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F M + + V ++HYGC+ D L RAG + EA + I+ MPM D VW LL GCR+H
Sbjct: 390 AFASMATEHSVEPGIEHYGCLVDALARAGRLREAEDAIRSMPMAPDAAVWGALLSGCRLH 449
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+ E+ AA ++ P D G Y + A V A +R + + K GCS+
Sbjct: 450 GDAELGARAAREAVRCDPRDSGAYVLAASVLARGGNPGRGAGVRGRMREAGVGKVPGCSM 509
Query: 486 IQLNG 490
I++NG
Sbjct: 510 IEVNG 514
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 247/427 (57%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN + S++ +I + A++LF +M I D +L ACS+
Sbjct: 242 ACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSR 301
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H V+K+G V + N+L+H+Y + AQ+LF E D +S N++
Sbjct: 302 LLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSM 361
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GYVK G++ AR LFD MP +D VSW +++GYAQ D+ E + LF M KPD
Sbjct: 362 ISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDE 421
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVS +SAC L L+QGK IH YI N ++++ L T L++ Y K G + A+E+F+
Sbjct: 422 TILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKG 481
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+EK + TWNA+++GLAM+GL SL FS M E + P+ +T + L C H GLVDE
Sbjct: 482 LEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEG 541
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F+ M + + +KHYGCM DLLGRAG+++EA E+I+ MPM DV W LLG C+
Sbjct: 542 HRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACK 601
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+G+ E E +++L P+ G +L+++YA+ W DV+++R + + K GC
Sbjct: 602 KYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGC 661
Query: 484 SLIQLNG 490
S+I+ +G
Sbjct: 662 SMIEAHG 668
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 75/489 (15%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L +++C+ IKQ +QI + + G F + +L T I+ ++
Sbjct: 29 LETHLQKCQNIKQFNQILSQMILSG--FFKDSFAASRLLKFSTELPFIN---------IN 77
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
+ IF++I P+ F NT+++ + +SP A+ ++ M ++ D Y++P L ++CS
Sbjct: 78 QSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCS 137
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + I VLK+GF DV++ N+L+++Y V L DA+++FD D+VS N+
Sbjct: 138 IRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNS 197
Query: 183 LIDGYVKAGDLAHARQLFDRMPFR-------------------------------DAVSW 211
++ GYV G++ A+ ++DRMP R D VSW
Sbjct: 198 MLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSW 257
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH----- 266
L++ Y Q++ EEA+ LF M I D + ++S LSAC+RL + GK +H
Sbjct: 258 SALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVK 317
Query: 267 ----RYIELNQIRVDSFLS----------------------TGLVDFYAKCGYINTAIEI 300
Y+ L + + S ++ Y KCG I A +
Sbjct: 318 VGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARAL 377
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+S +K+ +W+AM+ G A +LV F M KPD ++ + C+H +
Sbjct: 378 FDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAAL 437
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + + + G+ + + ++ + G +E+ALE+ K + G V W+ L+
Sbjct: 438 DQGKWIHAYIRK-NGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKG-VSTWNALIL 495
Query: 421 GCRIHGNVE 429
G ++G V+
Sbjct: 496 GLAMNGLVD 504
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 274/492 (55%), Gaps = 63/492 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ IP P+ +N + R ++ S + +VLF QM+ + + P+ ++FP +L++
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRLRD------ 164
C ++ + + +H V+K GF + FV +L+ +Y VF + +
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 165 ---------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
A+ LFD RD+V NT+I GY++A D+ AR+LFD+MP +D +
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVM 180
Query: 210 SWGTLVAGYAQSDQ---CE----------------------------EAIQLFCNMM-DL 237
SW T++ GYA + CE E + F M+ D
Sbjct: 181 SWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDG 240
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ P++ LV+ LSACARLG L+ GK +H Y E + + + ++ L+D YAKCG + TA
Sbjct: 241 TVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETA 300
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+++F+S K+L +WN ++ GLA+HG G +L FS M A PDG+T +G L C+H
Sbjct: 301 LDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHM 360
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLV++ F M Y + ++HYGC+ DLLGRAGL+ A++ I+KMP+ D +W+
Sbjct: 361 GLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAA 420
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG CR++ NVE+AE A E +++ +P++ Y +L+++Y + RW+DV +++ ++
Sbjct: 421 LLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGF 480
Query: 478 KKNAGCSLIQLN 489
KK GCSLI++N
Sbjct: 481 KKLPGCSLIEVN 492
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 266/459 (57%), Gaps = 39/459 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM----RTVSIPPDFYSFPF 116
+++A +F+ IP P F YNT+IR ++P +AV L+++M + PD +FPF
Sbjct: 28 IAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPF 87
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSL--MHVYC--------VFH-RLRD- 164
+LRAC+ + + +H+ V+K G D FV N+L MH C +F R R+
Sbjct: 88 VLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRARED 147
Query: 165 -------------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
A++LFDE +D+VS N +I Y K GD+A AR+LFD++P
Sbjct: 148 AVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPE 207
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
RD VSW +++GY + A++LF M + KPD + ++S LSACA G+L+ G+ +
Sbjct: 208 RDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRL 267
Query: 266 HRYIELNQIRVDSF---LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
H + + + F L L+D YAKCG + +A E+F S ++K++ TWN+++ GLA+H
Sbjct: 268 HSSLS-DMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALH 326
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G S+ F +M++ +++PD +T + L+ CSH G+VD+ R+ F+ M+ Y V +KH
Sbjct: 327 GHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKH 386
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
YGCM D+LGRAGL++EA E I M + +W LL CR+HG +E+A+ A ++K +
Sbjct: 387 YGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKAR 446
Query: 443 PEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
++ G Y +L+++YA+ W K+R+ +D + K A
Sbjct: 447 NDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEA 485
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 16/249 (6%)
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM----DLDIKPDNIAL 246
G +AHA +FD++P D + TL+ G A + +A+ L+ M+ ++PD +
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
L AC +G + G +H ++ D+F+ L+ +A CG + A +F+
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ W+AM+ G A G + F E +K D V+ + + G + AR+L
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFD---ECPVK-DLVSWNVMITAYAKRGDMALAREL 201
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCR 423
FD++ +++ + M R G ALE+ ++M G D+ LL C
Sbjct: 202 FDQVP-----ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACA 256
Query: 424 IHGNVEIAE 432
G++++ +
Sbjct: 257 DSGDLDVGQ 265
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 245/429 (57%), Gaps = 4/429 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L Y++++F PS F + II H L A+ ++QM T + P+ ++F +L+
Sbjct: 25 LDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK- 83
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
LC + +HSQ +KLGF D++V L+ VY + AQ+LFD + + +VS
Sbjct: 84 ---LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSL 140
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++ Y K G+L AR LFD M RD V W ++ GY Q+ EA+ LF M+ K
Sbjct: 141 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 200
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + ++S LSAC +LG LE G+ +H YIE N I+ + + T LVD Y+KCG + A +
Sbjct: 201 PNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLV 260
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +K++ WN+M+VG AM G + +L F M + P +T +G L C H+G V
Sbjct: 261 FDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWV 320
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
E +F++M+ YG+ +++HYGCM +LLGRAG +E+A E++K M + D +W LLG
Sbjct: 321 TEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 380
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+HG + + E E ++ + G Y +L+++YA W+ V ++R + +KK
Sbjct: 381 ACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKE 440
Query: 481 AGCSLIQLN 489
GCS I++N
Sbjct: 441 PGCSSIEVN 449
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V + L Y G L ++ LF R W ++ G+A E+A+ + M+
Sbjct: 10 VPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQ 69
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++P+ S L C +E GK +H D ++ TGL+D YA+ G + +A
Sbjct: 70 GVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSA 125
Query: 298 IEIFESSQEKNLFT-------------------------------WNAMLVGLAMHGLGR 326
++F++ EK+L + WN M+ G +G+
Sbjct: 126 QQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPN 185
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCM 386
+LV F RM++A+ KP+ VT+L L C G ++ R + +E+ G+ + +
Sbjct: 186 EALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN-NGIQFNVHVGTAL 244
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
D+ + G +E+A + K+ DV W+ ++ G + G
Sbjct: 245 VDMYSKCGSLEDARLVFDKID-DKDVVAWNSMIVGYAMXG 283
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
YA G ++ ++ +F +Q ++F W A++ G A+ GL +L ++++M+ ++P+ T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
L C ++ + L + + G +L + D+ R G + A ++ MP
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKL-GFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 408 MGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA-NADRWEDVV 466
V + + +L HG ++ A + ++ DG + V+ D Y N E +V
Sbjct: 134 EKSLVSL-TAMLTCYAKHGELDAARVLFD---GMEERDGVCWNVMIDGYTQNGMPNEALV 189
Query: 467 KIRRSLDAGKIKKN 480
RR L A K K N
Sbjct: 190 LFRRMLKA-KAKPN 202
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 283/493 (57%), Gaps = 22/493 (4%)
Query: 1 MTLNNFIKRCKTIKQIH---QIHAHFLTKGLL---FLSPCHILTTILYAITTFKPISSAS 54
+T +K C I ++ Q+H H GLL F+S I LYA
Sbjct: 88 LTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIH---LYA----------- 133
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
L YA S+F+ + S+N++I ++ + + + LF M+ + D +
Sbjct: 134 --ACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTM 191
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
++ AC++L +S+A + + DV++ N+L+ + +L+ A+++F +
Sbjct: 192 IKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKV 251
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
R++V+ N +I Y K D+ AR++FD++P +D +SW ++++GY+Q++ +A+++F M
Sbjct: 252 RNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQM 311
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+KPD I + S +S+CA LG L+ GK +H Y+ N I+ D+ + L+D Y KCG
Sbjct: 312 QRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSA 371
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A+++F+ +EK+ +WN++++GLA +G + SL F M+ +P+GVT LG L+ C
Sbjct: 372 KEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIAC 431
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
++A LV+E F+ M+ +Y + ++KHYGC+ DLLGRAG +E+AL I +MP+ D V
Sbjct: 432 ANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVV 491
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LLG C HG+V IAE + + +L+P + G Y +L++ YA+A RW + + +R+ +
Sbjct: 492 WRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMAD 551
Query: 475 GKIKKNAGCSLIQ 487
++K+ GCS ++
Sbjct: 552 TDVRKSPGCSAVE 564
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 209/446 (46%), Gaps = 78/446 (17%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCH-ILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
++ I ++HA+++ GL CH ++ +L + +P L +A +F+ I
Sbjct: 1 MEAIKRLHAYYIVSGLY---NCHYAMSKVLRSYAILQP----------DLVFAHKVFDQI 47
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P+TF +N +IR +P +A+ + + + + PD +FPF+L+AC+++ + + +
Sbjct: 48 EAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGE 107
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+H+ + KLG + D+FV NSL+H+Y L A+ +FDE++ +DVVS N+LI
Sbjct: 108 QMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLI------- 160
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
GY+Q ++ ++ + LF M + +K D + ++ +S
Sbjct: 161 ------------------------CGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVS 196
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF------------------------ 287
AC RLG+ + RYIE I VD +L LVD+
Sbjct: 197 ACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVT 256
Query: 288 -------YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
YAK I +A +IF+ +K+L +W++M+ G + +L F +M A++
Sbjct: 257 MNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKV 316
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
KPD + I + C+H G +D K E + + + D+ + G +EAL
Sbjct: 317 KPDAIVIASVVSSCAHLGALDLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEAL 375
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHG 426
++ K+M D W+ ++ G +G
Sbjct: 376 QVFKEMK-EKDTLSWNSIIIGLANNG 400
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 279/478 (58%), Gaps = 16/478 (3%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
KT Q+ QIHAH L L H IL + F + A D + YA +F+
Sbjct: 20 KTRTQLPQIHAHILRHHL------HQSNQIL---SHFISVCGA----LDKMGYANLVFHQ 66
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P+ +N++I+ ++L N+++LFSQM+ I PD ++F LL++CS +C + +
Sbjct: 67 TQNPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIG 126
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ +H V+ +GF + ++ +Y R+ DA+++FDE+L RDV+ N +I G+ K
Sbjct: 127 KGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKV 186
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
GD+ +LF +M R VSW +++AG QS + EA++LF M D +PD+ +V+ L
Sbjct: 187 GDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTIL 246
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFESSQEKN 308
CARLG ++ G+ IH Y E +++ D F+S G LVDFY KCG + TA +F +KN
Sbjct: 247 PVCARLGAVDVGEWIHSYAESSRLLRD-FISVGNSLVDFYCKCGILETAWRVFNEMPQKN 305
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ +WNAM+ GL +G G L F MI ++P+ T +G L C+HAGLV+ R LF
Sbjct: 306 VVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFT 365
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M + + +L+H+GCM DLL R G +EEA ++++ MPM + +W LL R G+V
Sbjct: 366 SMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDV 425
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+ AE A + +++L+P + G Y +L++VYA +W++V K+R + I+KN G S++
Sbjct: 426 KHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/490 (34%), Positives = 271/490 (55%), Gaps = 17/490 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+++CK + + Q HA T GL T +A++ + ++ S P L+YA
Sbjct: 11 LLEKCKNVNHLKQAHAQVFTTGL---------DTNTFALS--RLLAFCSHPYQGSLTYAC 59
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F I +P+ NTII+ + + +F++M + PD Y+ P++L+AC+ L
Sbjct: 60 RVFERIHHPTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALR 119
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
SL + +H KLG + D+FV NSLM +Y V + A+ +FDE+ VS + +I
Sbjct: 120 DCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMIS 179
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY K GD+ AR FD P +D WG +++GY Q+ +E + LF + + PD
Sbjct: 180 GYAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESI 239
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
VS LSACA LG L+ G IHRY+ + + LST L+D YAKCG + A +F+S
Sbjct: 240 FVSILSACAHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMP 299
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E+++ WNAM+ GLAMHG G +L FS M + IKPD +T + CS++G+ E +
Sbjct: 300 ERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQ 359
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG-----DVFVWSGLLG 420
L D+M S+Y + + +HYGC+ DLL RAGL EA+ MI+++ + W L
Sbjct: 360 LLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLS 419
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C HG ++AE AA+ +++L+ GVY +L+++YA + + D ++R + + K
Sbjct: 420 ACCNHGQAQLAERAAKRLLRLE-NHSGVYVLLSNLYAASGKHSDARRVRNMMRNKGVDKA 478
Query: 481 AGCSLIQLNG 490
GCS ++++G
Sbjct: 479 PGCSSVEIDG 488
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 271/506 (53%), Gaps = 43/506 (8%)
Query: 14 KQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
+ + QIH H + G+ H+ +L + TF+ + YA +F+ IP
Sbjct: 12 RAVRQIHGHLVVGGIAAARLQHLRELLLSCVATFR----------GRMGYARKVFDGIPR 61
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLCSHSLAQT 132
P F +N ++R + +P +A ++ +M S + PD ++F +LLRAC+ L +
Sbjct: 62 PDLFMHNAMVRGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRAGRQ 121
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLR----------------------------- 163
+H V+KLGF+ D +V N+L++++ LR
Sbjct: 122 VHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAARGD 181
Query: 164 --DAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
A+++FDE ++D+V N ++ Y K G++ +AR+LFDR P +D VSW T++ GYA
Sbjct: 182 MAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAAQ 241
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFL 280
+ A+++F M PD +VS LS CA G L+ G+ IH + L + + +
Sbjct: 242 GMLKHALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIHHQLHLERRPWISIVV 301
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
LV YAKCG ++TA+E F + ++ +++TWN+++ GLA HG S+ +F +M+E RI
Sbjct: 302 GNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFKKMLEKRI 361
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
P+ ++ L L CSHAGLV++ +K F M+ YG+ +HY C+ D+LGRAGL++EA
Sbjct: 362 HPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRAGLLDEAY 421
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANAD 460
++ M VW LLG CR HGN+ + + E ++ + + Y +L+ +YA++
Sbjct: 422 AIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADYVLLSGIYASSG 481
Query: 461 RWEDVVKIRRSLDAGKIKKNAGCSLI 486
W V RRS+D I+K AG + I
Sbjct: 482 EWLGVETERRSMDRRGIRKAAGYAQI 507
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 248/416 (59%), Gaps = 39/416 (9%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSI-PPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
+NT+IR ++ +P A+VL+ M I PP+ ++FPFLL +C++L S +HS +
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+K GF D+FV N+L+H+Y VF G+L AR
Sbjct: 62 IKHGFESDLFVRNALIHLYSVF-------------------------------GNLNLAR 90
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
LFD RD VS+ T++ GYA+ +Q E A+ LF M + D + LV+ LSACARLG
Sbjct: 91 TLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQN----SDEVTLVAVLSACARLG 146
Query: 258 ELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE--SSQEKNLFTWNA 314
+ GK + H+YIE ++ L+ ++D YAKCG I++A+EIF K F +N+
Sbjct: 147 AFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNS 206
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
M+ GLA HGLG ++ F +I +KPD VT +G L C H+GL++E +KLF+ M + Y
Sbjct: 207 MIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAY 266
Query: 375 GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAA 434
G+ +++HYGCM DLLGR G +EEA ++++KMP + +W LL CR HGNV+I E A
Sbjct: 267 GIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIA 326
Query: 435 AEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ +++++ + G Y +L+++ A+A++WE+ ++R+ ++ I+K G S I+L G
Sbjct: 327 GQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGG 382
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 164/381 (43%), Gaps = 55/381 (14%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L N R +++ H++H+H + G F S + +++ + F L+
Sbjct: 41 LLNSCARLSSLEPGHEVHSHIIKHG--FESDLFVRNALIHLYSVF-----------GNLN 87
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
A ++F+ SYNT+I+ + + P +A+ LF +M+ D + +L AC+
Sbjct: 88 LARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQN----SDEVTLVAVLSACA 143
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L + L + ++ Q ++ G VF N+++
Sbjct: 144 RLGAFDLGKRLYHQYIENG----VFNQNTILTA--------------------------A 173
Query: 183 LIDGYVKAGDLAHARQLFDRM--PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++D Y K G + A ++F R+ + + +++AG AQ E AI +F ++ +K
Sbjct: 174 VMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLK 233
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAI 298
PD + V L AC G +E+GK + + N + + +VD + G + A
Sbjct: 234 PDEVTFVGVLCACGHSGLIEEGKKLFESM-FNAYGIKPQMEHYGCMVDLLGRYGCLEEAY 292
Query: 299 EIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++ + E N W A+L HG ++ + +++E + +L + + + A
Sbjct: 293 DLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNI-LADA 351
Query: 358 GLVDEARKLFDEMESVYGVSK 378
+EAR++ ME +G+ K
Sbjct: 352 NQWEEARQVRKVMED-HGIRK 371
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 275/507 (54%), Gaps = 43/507 (8%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGL--------LFLSPCHILTTILYAITTFKPISSA 53
+++ +K C T + Q+HA + KGL FL+ C+ L+
Sbjct: 75 SISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSN-------------- 120
Query: 54 SSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYS 113
SY S+FN + PST +NT I+ ++ S V LF +M+ PD ++
Sbjct: 121 -------FSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFT 173
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
+P L++ACS++C H ++ G DVFV+ SL+ +Y + A+++FDE+
Sbjct: 174 YPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMG 233
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
R+VVS +I GY DL AR+LFD MP ++AVSW +++GY + A ++F
Sbjct: 234 ERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDE 293
Query: 234 M-------------MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD-SF 279
M + ++KPD +VS +SAC+++G LE K + Y+ + I V +
Sbjct: 294 MPHRNRDVVAWSALISGNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAH 353
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
+ L+D AKCG ++ A ++FE +++L ++ +M+ GL++HG G ++ FSRM+
Sbjct: 354 VIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEG 413
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ PD V L CS AGLVDE F+ M++ Y + HY CM DLLGRAG ++EA
Sbjct: 414 LTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEA 473
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANA 459
E++K MP+ W LLG C++H ++E+ E A+ + +L+P++ G Y +L+++YA A
Sbjct: 474 YELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAA 533
Query: 460 DRWEDVVKIRRSLDAGKIKKNAGCSLI 486
++W DV +R + I+K GCS I
Sbjct: 534 EQWLDVSLLRNKMRERGIRKIPGCSWI 560
>gi|356507694|ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 535
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 266/485 (54%), Gaps = 51/485 (10%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF 111
SA SP + LS+A S+F ++F NT+IRA S PL A+ +++ M T ++ D
Sbjct: 47 SALSPMGN-LSHAHSLFLQTSMHNSFICNTMIRAFANSSYPLQALYIYNHMHTTNVVSDH 105
Query: 112 YSFPFLLRACSQLCSHSLAQT---------------IHSQVLKLGFICDVFVLNSLMHVY 156
+++ F+L+ACS+ +H AQ +H VLKLG D + NSL+ +Y
Sbjct: 106 FTYNFVLKACSR--AHKFAQEFVKCDEFIIISKGGEVHCTVLKLGLDQDPSIQNSLLCMY 163
Query: 157 CVFHRLRDAQELFDEIL-------------------------------YRDVVSCNTLID 185
+ AQ LFDEI +++VVS NT+I
Sbjct: 164 SQCGLVHVAQHLFDEISNRSLVSWNIMISAYDRVNDSKSADYLLESMPHKNVVSWNTVIG 223
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y++ GD+ AR++F MP RDAVSW +L+AG E A+ LF M + +++P +
Sbjct: 224 RYIRLGDIEGARRVFQIMPQRDAVSWNSLIAGCVSVKDYEGAMGLFSEMQNAEVRPTEVT 283
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
L+S L ACA G LE G IH ++ +++ +L L++ Y+KCG +N+A E+F +
Sbjct: 284 LISVLGACAETGALEMGSKIHESLKACGHKIEGYLGNALLNMYSKCGKLNSAWEVFNGMR 343
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA--RIKPDGVTILGALVGCSHAGLVDEA 363
K L WNAM+VGLA+HG +L FS M ++P+ VT LG L+ CSH GLVD+A
Sbjct: 344 IKTLSCWNAMIVGLAVHGYCEEALQLFSEMESGLDTVRPNRVTFLGVLIACSHKGLVDKA 403
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R FD M Y + ++KHYGC+ DLL R GL+EEA +MIK P+ +W LLG CR
Sbjct: 404 RWNFDHMAKQYKILPDIKHYGCIVDLLSRFGLLEEAHQMIKTAPLQNSAILWRTLLGACR 463
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
GNVE+A+ + + + KL G Y +L+++YA A+RW++V ++R + + K
Sbjct: 464 TQGNVELAKVSFQQLAKLGRLTDGDYVLLSNIYAEAERWDEVERVRSEMIGLHVPKQVAY 523
Query: 484 SLIQL 488
S I +
Sbjct: 524 SQIDM 528
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 282/483 (58%), Gaps = 14/483 (2%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C T++++ QIHA + GL I +T + ++ + +D ++YA +F
Sbjct: 34 QCSTMRELKQIHASLIKTGL-----------ISDTVTASRVLAFCCASPSD-MNYAYLVF 81
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLLRACSQLCS 126
I + + F +NTIIR + S P A+ +F M + S+ P ++P + +A +L
Sbjct: 82 TRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H V+K G D F+ N+++H+Y L +A +F ++ DVV+ N++I G
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
+ K G + A+ LFD MP R+ VSW ++++G+ ++ + ++A+ +F M + D+KPD +
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS L+ACA LG EQG+ IH YI N+ ++S + T L+D Y KCG I + +FE + +
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K L WN+M++GLA +G ++ FS + + ++PD V+ +G L C+H+G V A +
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M+ Y + +KHY M ++LG AGL+EEA +IK MP+ D +WS LL CR G
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NVE+A+ AA+ + KL P++ Y +L++ YA+ +E+ V+ R + +++K GCS I
Sbjct: 442 NVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Query: 487 QLN 489
+++
Sbjct: 502 EVD 504
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 283/493 (57%), Gaps = 22/493 (4%)
Query: 1 MTLNNFIKRCKTIKQIH---QIHAHFLTKGLL---FLSPCHILTTILYAITTFKPISSAS 54
+T +K C I ++ Q+H H GLL F+S I LYA
Sbjct: 553 LTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIH---LYA----------- 598
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
L YA S+F+ + S+N++I ++ + + + LF M+ + D +
Sbjct: 599 --ACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTM 656
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
++ AC++L +S+A + + DV++ N+L+ + +L+ A+++F +
Sbjct: 657 IKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKV 716
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
R++V+ N +I Y K D+ AR++FD++P +D +SW ++++GY+Q++ +A+++F M
Sbjct: 717 RNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQM 776
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+KPD I + S +S+CA LG L+ GK +H Y+ N I+ D+ + L+D Y KCG
Sbjct: 777 QRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSA 836
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A+++F+ +EK+ +WN++++GLA +G + SL F M+ +P+GVT LG L+ C
Sbjct: 837 KEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIAC 896
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
++A LV+E F+ M+ +Y + ++KHYGC+ DLLGRAG +E+AL I +MP+ D V
Sbjct: 897 ANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVV 956
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LLG C HG+V IAE + + +L+P + G Y +L++ YA+A RW + + +R+ +
Sbjct: 957 WRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMAD 1016
Query: 475 GKIKKNAGCSLIQ 487
++K+ GCS ++
Sbjct: 1017 TDVRKSPGCSAVE 1029
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 232/411 (56%), Gaps = 6/411 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ P P ++ +++A++ P +A+ LF R + D Y+F F L+AC+
Sbjct: 47 AHQVFDRRPTP----WHALLKAYSHGPHPQDALQLFRHARWHA-ADDTYAFTFALKACAG 101
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L +H V++ GF +V +L++VY + L D++ F+E+ ++ VS N +
Sbjct: 102 LGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVV 161
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G++ +AR LF+RMP R+ VSW ++ GY ++ + EA+ LF MM I P
Sbjct: 162 ITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSE 221
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF-E 302
I +++ + A + +G++ G+ +H Y E + D + L+D YAK G I ++ +F E
Sbjct: 222 ITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDE 281
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+NL +W +++ G AMHGL ++ F+ M A I+P+ +T L L CSH GLV++
Sbjct: 282 MLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQ 341
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
F M Y ++ ++KH+GC+ D+LGRAG + EA ++I+ P+ + VW LLG C
Sbjct: 342 GVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCC 401
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+G VE+ E + ++ L+ E GG + VL+++ R+ D +R+ +D
Sbjct: 402 SKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVD 452
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 209/446 (46%), Gaps = 78/446 (17%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCH-ILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
++ I ++HA+++ GL CH ++ +L + +P L +A +F+ I
Sbjct: 466 MEAIKRLHAYYIVSGLY---NCHYAMSKVLRSYAILQP----------DLVFAHKVFDQI 512
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P+TF +N +IR +P +A+ + + + + PD +FPF+L+AC+++ + + +
Sbjct: 513 EAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGE 572
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+H+ + KLG + D+FV NSL+H+Y L A+ +FDE++ +DVVS N+LI
Sbjct: 573 QMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLI------- 625
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
GY+Q ++ ++ + LF M + +K D + ++ +S
Sbjct: 626 ------------------------CGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVS 661
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF------------------------ 287
AC RLG+ + RYIE I VD +L LVD+
Sbjct: 662 ACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVT 721
Query: 288 -------YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
YAK I +A +IF+ +K+L +W++M+ G + +L F +M A++
Sbjct: 722 MNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKV 781
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
KPD + I + C+H G +D K E + + + D+ + G +EAL
Sbjct: 782 KPDAIVIASVVSSCAHLGALDLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEAL 840
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHG 426
++ K+M D W+ ++ G +G
Sbjct: 841 QVFKEMK-EKDTLSWNSIIIGLANNG 865
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 152/380 (40%), Gaps = 56/380 (14%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAI--------TTFK--PISSASSPTT--------D 59
Q+H + KG F + H +Y + F+ P+ +A S
Sbjct: 110 QLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWG 169
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+ YA +F +P + S++ +I +T P+ AV LF +M I P + ++
Sbjct: 170 EVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVP 229
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL-YRDVV 178
A S + + + +H K G + DV V NSL+ +Y ++++ +FDE+L R++V
Sbjct: 230 ALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLV 289
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S ++I +G+A +A++LF +M
Sbjct: 290 SWTSII-------------------------------SGFAMHGLSVKAVELFADMRRAG 318
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYI--ELNQIRVDSFLSTGLVDFYAKCGYINT 296
I+P+ I +S L AC+ G +EQG + + E N I D ++D + G +
Sbjct: 319 IRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYN-INPDVKHFGCIIDMLGRAGRLRE 377
Query: 297 AIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM--IEARIKPDGVTILGALVG 353
A +I E N W +L + +G + ++ +E D V + L
Sbjct: 378 AEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTE 437
Query: 354 CSHAGLVDEARKLFDEMESV 373
+ RKL D+ SV
Sbjct: 438 LRRFSDAEIVRKLVDQRNSV 457
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 259/476 (54%), Gaps = 49/476 (10%)
Query: 8 KRCKTIKQIHQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
K+C+++K + Q+HAH + GL LF ++ I F +S S + YA
Sbjct: 59 KQCESMKHLEQLHAHVIQTGLEQNLF---------VMGKIIVFCAVSECGS-----MDYA 104
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
L +F I P F +NT+IR P A + +M+ D +++ FL++ C QL
Sbjct: 105 LRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQL 164
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S L + IH VLK G VFV N+L+H+Y +F
Sbjct: 165 GSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFK------------------------ 200
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
D+ A LF+ MP V+W T++ + +EAI+LF M+ +KPD+
Sbjct: 201 -------DIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDA 253
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
V LSACA LGEL+ G+ +H I+ + +S L+D YAKCG + A EIF
Sbjct: 254 TFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKM 313
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI-KPDGVTILGALVGCSHAGLVDEA 363
+ +N+ +WN M++GLAMHG G +L FS+M+E ++ P+ VT LG L CSH G+V+E
Sbjct: 314 KGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEG 373
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+ FD M Y + +KHYG M D+LGRAGL+EEA +IK MP+ + VW LL CR
Sbjct: 374 RRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACR 433
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
+HGN+E+AE + +++L+P+ Y +LA++YA+A +W V ++R+S+ ++K
Sbjct: 434 VHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQK 489
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 194/542 (35%), Positives = 283/542 (52%), Gaps = 83/542 (15%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+ + ++HA L GL L P + K ISS + P S IF + P
Sbjct: 71 LHHVQELHAQLLKHGL-HLDP----------LAASKLISSYALQRRLPASR--RIFASFP 117
Query: 73 YP--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P +TF NT++RA+ L + P AV LFS M D +++ FL++A S L
Sbjct: 118 NPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQR----DSFTYSFLIKALSSSGLTPL- 172
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRL--RD-------------- 164
+ +HS V+KLG I D +V N+L+ Y VF + RD
Sbjct: 173 RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQ 232
Query: 165 -----AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY- 218
A+ +FDE+ +D VS NT++DGY KAG + A +LF MP R+ VSW T+V+GY
Sbjct: 233 GEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYC 292
Query: 219 ------------------------------AQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
AQ+ EEA +LF M + ++ D A+VS
Sbjct: 293 KKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVS 352
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS-QEK 307
L+ACA G L GK IHRY+ Q+ + + ++D + KCG +N A +F++ EK
Sbjct: 353 ILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEK 412
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +WN ++ G AMHG G +L +F++M +PD VT++ L C+H G V+E R+ F
Sbjct: 413 DSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHF 472
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
ME YG+ +++HYGCM DLLGR GLIEEA+ +IK MP + +W LL CR+H N
Sbjct: 473 SNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKN 532
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
VE AE A + KL+P + G Y VL+++YA A +W D+ K R + +K+AG S I+
Sbjct: 533 VEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIE 592
Query: 488 LN 489
L+
Sbjct: 593 LD 594
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 280/491 (57%), Gaps = 21/491 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C T + + ++H H + L ++ T I++ + ++ +A
Sbjct: 21 LRACVTFRDLLRVHGHVVR--LRISQSSYLATQIVHLCNAHRRVT-----------HAAR 67
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPD------FYSFPFLLR 119
+F + P+ +N +I+A+ +AV ++ +M R + PPD +++PFLL+
Sbjct: 68 VFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLK 127
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC + L + +H+ V++ G V NSL+ +Y L A ++FDE+ RDVVS
Sbjct: 128 ACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVS 187
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N LI + + G + A LF+ MP + V+W +V+GY A+ F +M
Sbjct: 188 WNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGF 247
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+PD++++V+ L ACA+LG LE G+ I+ Y + + + + + L++ YAKCG I+ A++
Sbjct: 248 EPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAG 358
+F+ +K++ +W+ ++ GLA HG ++ F+ M E +++P+ +T +G L CS+AG
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LVDE FD M VYGV ++HYGC+ DLLGR+G I AL++++ MP+ D VW L
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR HG+V+ A AAE +++L+P+D G +LA+VYA A RW DV R+++ + ++
Sbjct: 428 LSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMR 487
Query: 479 KNAGCSLIQLN 489
K GCSLI++
Sbjct: 488 KTPGCSLIEVG 498
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 280/491 (57%), Gaps = 21/491 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C T + + ++H H + L ++ T I++ + ++ +A
Sbjct: 21 LRACVTFRDLLRVHGHVVR--LRISQSSYLATQIVHLCNAHRRVT-----------HAAR 67
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPD------FYSFPFLLR 119
+F + P+ +N +I+A+ +AV ++ +M R + PPD +++PFLL+
Sbjct: 68 VFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLK 127
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC + L + +H+ V++ G V NSL+ +Y L A ++FDE+ RDVVS
Sbjct: 128 ACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVS 187
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N LI + + G + A LF+ MP + V+W +V+GY A+ F +M
Sbjct: 188 WNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGF 247
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+PD++++V+ L ACA+LG LE G+ I+ Y + + + + + L++ YAKCG I+ A++
Sbjct: 248 EPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAG 358
+F+ +K++ +W+ ++ GLA HG ++ F+ M E +++P+ +T +G L CS+AG
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LVDE FD M VYGV ++HYGC+ DLLGR+G I AL++++ MP+ D VW L
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR HG+V+ A AAE +++L+P+D G +LA+VYA A RW DV R+++ + ++
Sbjct: 428 LSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMR 487
Query: 479 KNAGCSLIQLN 489
K GCSLI++
Sbjct: 488 KTPGCSLIEVG 498
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 271/488 (55%), Gaps = 16/488 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C +++ QIHA F+ GLL P + + S S + + YAL
Sbjct: 31 LLQMCHNFQEVRQIHAQFIVSGLLARPP-----------NAGRLLDSYVSMSQ--IYYAL 77
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+FN IP P F+YN +IR TL + P ++++L++++ + PD Y++ F+L+ CS L
Sbjct: 78 LVFNRIPSPDVFAYNAMIRGLTLGNCPYDSLLLYNKLLLGGLTPDNYTYTFVLKVCSHLK 137
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + +H QV+K G D + SL+H+Y L A+ + E +V++ N++I
Sbjct: 138 AIFEGKQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLAECSQENVLAINSMIS 197
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM---DLDIKPD 242
GY+ G + AR +FD+M +DA +W ++ GY ++ EEA+ +F MM + ++P+
Sbjct: 198 GYMSQGHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPN 257
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
ALVS+LSA A LG L+QG+ IH YI ++ L TGLVD YAKCG I+ + ++F
Sbjct: 258 ESALVSSLSATACLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFR 317
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
Q++++ TW M+ G AMHG R F M+ +P+ V + L CSHAG ++
Sbjct: 318 EMQQRDVVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYLEL 377
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
F++M + +G+ ++HYGCM DLLGRAG + EA E+I MP +W LL C
Sbjct: 378 GHHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSAC 437
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIH ++ A +M+L+P G YK+ ++++A E+ + R + +++ G
Sbjct: 438 RIHKDLRRGRRAFRQLMQLEPLRGDRYKLAGQMFSSAGEKEEADNVTRFIKENELETTRG 497
Query: 483 CSLIQLNG 490
S I++NG
Sbjct: 498 SSFIEING 505
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 280/491 (57%), Gaps = 21/491 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C T + + ++H H + L ++ T I++ + ++ +A
Sbjct: 21 LRACVTFRDLLRVHGHVVR--LRISQSSYLATQIVHLCNAHRRVT-----------HAAR 67
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPD------FYSFPFLLR 119
+F + P+ +N +I+A+ +AV ++ +M R + PPD +++PFLL+
Sbjct: 68 VFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLK 127
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC + L + +H+ V++ G V NSL+ +Y L A ++FDE+ RDVVS
Sbjct: 128 ACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVS 187
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N LI + + G + A LF+ MP + V+W +V+GY A+ F +M
Sbjct: 188 WNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGF 247
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+PD++++V+ L ACA+LG LE G+ I+ Y + + + + + L++ YAKCG I+ A++
Sbjct: 248 EPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAG 358
+F+ +K++ +W+ ++ GLA HG ++ F+ M E +++P+ +T +G L CS+AG
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LVDE FD M VYGV ++HYGC+ DLLGR+G I AL++++ MP+ D VW L
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR HG+V+ A AAE +++L+P+D G +LA+VYA A RW DV R+++ + ++
Sbjct: 428 LSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMR 487
Query: 479 KNAGCSLIQLN 489
K GCSLI++
Sbjct: 488 KTPGCSLIEVG 498
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 266/459 (57%), Gaps = 39/459 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM----RTVSIPPDFYSFPF 116
+++A +F+ IP P F YNT+IR ++P +AV L+++M + PD +FPF
Sbjct: 28 IAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPF 87
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSL--MHVYC--------VFH-RLRD- 164
+LRAC+ + + +H+ V+K G D FV N+L MH C +F R R+
Sbjct: 88 VLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRARED 147
Query: 165 -------------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
A++LFDE +D+VS N +I Y K GD+A AR+LFD++P
Sbjct: 148 AVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPE 207
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
RD VSW +++GY + A++LF M + KPD + ++S LSACA G+L+ G+ +
Sbjct: 208 RDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRL 267
Query: 266 HRYIELNQIRVDSF---LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
H + + + F L L+D YAKCG + +A E+F S ++K++ TWN+++ GLA+H
Sbjct: 268 HSSLS-DMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALH 326
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G S+ F +M++ +++PD +T + L+ CSH G+VD+ R+ F+ M+ Y V +KH
Sbjct: 327 GHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKH 386
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
YGC+ D+LGRAGL++EA E I M + +W LL CR+HG +E+A+ A ++K +
Sbjct: 387 YGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKAR 446
Query: 443 PEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
++ G Y +L+++YA+ W K+R+ +D + K A
Sbjct: 447 NDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEA 485
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 16/249 (6%)
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM----DLDIKPDNIAL 246
G +AHA +FD++P D + TL+ G A + +A+ L+ M+ ++PD +
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
L AC +G + G +H ++ D+F+ L+ +A CG + A +F+
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ W+AM+ G A G + F E +K D V+ + + G + AR+L
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFD---ECPVK-DLVSWNVMITAYAKRGDMALAREL 201
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCR 423
FD++ +++ + M R G ALE+ ++M G D+ LL C
Sbjct: 202 FDQVP-----ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACA 256
Query: 424 IHGNVEIAE 432
G++++ +
Sbjct: 257 DSGDLDVGQ 265
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 240/410 (58%), Gaps = 31/410 (7%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
N++IR + + LN++ +F+ M SI PD +FP +L+A +QLC + + IH V++
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
+GFICDV+ +L+H+YC + DA +LFDE+ R+ V+ N LI GY H R+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGY------THNRKF 171
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
+AI F M+ +P +V LSAC+ LG
Sbjct: 172 V-------------------------KAIDAFRGMLADGAQPSERTVVVVLSACSHLGAF 206
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
QGK IH +I N++R++ F+ T L+D YAKCG + ++FE +EKN++TWN ++ G
Sbjct: 207 NQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGY 266
Query: 320 AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
AM+G G +L FSRM+ KPD VT LG L C H GLV E R F M+ +G+
Sbjct: 267 AMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPR 326
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM 439
++HYGCM DLLGRAGL+EEALE+I+ M + D +W LL CR+HGN ++ E + ++
Sbjct: 327 IEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLI 386
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+L+P +G Y +L+++Y+ RW +V K+R ++ I+K GCS I++N
Sbjct: 387 ELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEIN 436
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 41/283 (14%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A +F+ +P + ++N +I +T + A+ F M P + +L A
Sbjct: 140 ISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSA 199
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L + + + IH + +VFV +L+ +Y + + +++F+EI ++V +
Sbjct: 200 CSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTW 259
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LI GY A + Q + A+Q F M+ + K
Sbjct: 260 NVLISGY-------------------------------AMNGQGDAALQAFSRMLMENFK 288
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQI-----RVDSFLSTGLVDFYAKCGYIN 295
PD + + L AC G + +G+ +++ + Q R++ + +VD + G +
Sbjct: 289 PDEVTFLGVLCACCHQGLVTEGR--WQFMSMKQQFGLQPRIEHY--GCMVDLLGRAGLLE 344
Query: 296 TAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
A+E+ +S S E + W A+L +HG +L R+IE
Sbjct: 345 EALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIE 387
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 262/475 (55%), Gaps = 14/475 (2%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
KT + +IH HFL GL IL + + + + YA +F +
Sbjct: 19 KTRSHLTEIHGHFLRHGLQ--QSNQILAHFVSVCASLRRVP-----------YATRLFAH 65
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P+ +N II+AH+L + FS M+T +I PD Y+ L ++ S L + L
Sbjct: 66 THNPNILLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLG 125
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+H+ V++LGF V + + VY R+ DA ++FDE+ DVV N +I G+ K
Sbjct: 126 GCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKM 185
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
GDL ++F +M R VSW +++ A++++ E+A++LF M++ +PD+ +LV+ L
Sbjct: 186 GDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVL 245
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSF-LSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
CARLG ++ G+ IH Y D+ + LVDFY KCG + A IF KN+
Sbjct: 246 PVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNV 305
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+WNAM+ GLA +G G + + F M+ +P+ T +G L C+H GLVD R LF
Sbjct: 306 VSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFAS 365
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M + VS +L+HYGC+ DLLGR G + EA ++I MP+ +W LL CR +G+ E
Sbjct: 366 MSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDRE 425
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
IAE AA+ +++L+P + G Y +L++VYA RW++V K+R + G +KK G S
Sbjct: 426 IAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQS 480
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 255/426 (59%), Gaps = 2/426 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L YA +F++ TF YN +I+A+ + P ++VL++ + + P ++F F+ A
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ S + +HSQ + GF D F +L+ Y L A+ +FDE+ RDV
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 151
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF-CNMMDLDI 239
N +I GY + GD+ A +LFD MP ++ SW T+++G++Q+ EA+++F C D +
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KP++I +VS L ACA LGELE G+ + Y N + ++ ++ Y+KCG I+ A
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE ++NL +WN+M+ LA HG +L F++M+ KPD VT +G L+ C H G
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V + ++LF ME V+ +S +L+HYGCM DLLGR G ++EA ++IK MPM D VW L
Sbjct: 332 MVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 391
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG C HGNVEIAE A+E + KL+P + G +++++YA ++W+ V+++R+ + +
Sbjct: 392 LGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMT 451
Query: 479 KNAGCS 484
K AG S
Sbjct: 452 KAAGYS 457
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 120/278 (43%), Gaps = 55/278 (19%)
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKP--------- 241
+L +AR+LFD + L+ Y Q E+I L+ N++ D ++P
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIF 89
Query: 242 --------------------------DNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
D+ + ++A A+LG L + + + +
Sbjct: 90 AASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP 149
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
V + + TG Y + G + A+E+F+S KN+ +W ++ G + +G +L F M
Sbjct: 150 VWNAMITG----YQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCM 205
Query: 336 IEAR-IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH----YGCMA--D 388
+ + +KP+ +T++ L C++ G ++ R+L G ++E Y C A +
Sbjct: 206 EKDKSVKPNHITVVSVLPACANLGELEIGRRL-------EGYARENGFFDNIYVCNATIE 258
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ + G+I+ A + +++ ++ W+ ++G HG
Sbjct: 259 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 266/487 (54%), Gaps = 12/487 (2%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ + +CKTI+++ +IHA LT GL P + F+ + P
Sbjct: 24 HHLLTQCKTIRELQRIHAQALTHGL---HP----NQQSISCKIFRSYAEFGRPAD----- 71
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ IP+P S+ +++ H A+ +FS PD ++ L A
Sbjct: 72 AGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGG 131
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H + + G ++ V N+L+ +YC + A+ +FD +L +D V+ ++
Sbjct: 132 LGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSM 191
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY+K + A F +MP + VSW L+ G+ Q Q +A++LF M+ +P++
Sbjct: 192 LYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNH 251
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I +V LSACA +G L+ G+ IH Y + + ++ L+D YAK G I +A +FE
Sbjct: 252 ITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEE 311
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
Q K+ FTW M+ + G GR ++ F M+ + I P+ VT + L CSHAGL+ E
Sbjct: 312 VQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEG 371
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+LFD+M VY + L+HYGCM DLLGR GL+EEA +I M + D+ +W LL C
Sbjct: 372 RELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACL 431
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HGN +AE A + ++K +P D GVY +L ++YA ++RW++ + +R+ + + KI K GC
Sbjct: 432 AHGNDRLAEIAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGC 491
Query: 484 SLIQLNG 490
S I+++G
Sbjct: 492 SWIEVDG 498
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 255/426 (59%), Gaps = 2/426 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L YA +F++ TF YN +I+A+ + P ++VL++ + + P ++F F+ A
Sbjct: 25 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 84
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ S + +HSQ + GF D F +L+ Y L A+ +FDE+ RDV
Sbjct: 85 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 144
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF-CNMMDLDI 239
N +I GY + GD+ A +LFD MP ++ SW T+++G++Q+ EA+++F C D +
Sbjct: 145 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 204
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KP++I +VS L ACA LGELE G+ + Y N + ++ ++ Y+KCG I+ A
Sbjct: 205 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 264
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE ++NL +WN+M+ LA HG +L F++M+ KPD VT +G L+ C H G
Sbjct: 265 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 324
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V + ++LF ME V+ +S +L+HYGCM DLLGR G ++EA ++IK MPM D VW L
Sbjct: 325 MVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 384
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG C HGNVEIAE A+E + KL+P + G +++++YA ++W+ V+++R+ + +
Sbjct: 385 LGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMT 444
Query: 479 KNAGCS 484
K AG S
Sbjct: 445 KAAGYS 450
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 120/279 (43%), Gaps = 55/279 (19%)
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKP--------- 241
+L +AR+LFD + L+ Y Q E+I L+ N++ D ++P
Sbjct: 24 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIF 82
Query: 242 --------------------------DNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
D+ + ++A A+LG L + + + +
Sbjct: 83 AASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP 142
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
V + + TG Y + G + A+E+F+S KN+ +W ++ G + +G +L F M
Sbjct: 143 VWNAMITG----YQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCM 198
Query: 336 IEAR-IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH----YGCMA--D 388
+ + +KP+ +T++ L C++ G ++ R+L G ++E Y C A +
Sbjct: 199 EKDKSVKPNHITVVSVLPACANLGELEIGRRL-------EGYARENGFFDNIYVCNATIE 251
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ + G+I+ A + +++ ++ W+ ++G HG
Sbjct: 252 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 290
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 260/436 (59%), Gaps = 4/436 (0%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
T ++YA + + + P + +N +IR + +P ++ ++ Q+ PD ++PFL
Sbjct: 801 TSDVNYAYKLLSKLSNPPDYGWNFVIRGFSNSKNPEKSIRVYIQILRSGFSPDHMTYPFL 860
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L++ S+L + + ++H V+K G D+F+ N+L+H+Y F A++LFDE+ Y+++
Sbjct: 861 LKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMYGSFRDKASARKLFDEMPYKNL 920
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V+ N+++D Y K+GD+ AR +FD M RD V+W +++ GY +S + EA+++F MM +
Sbjct: 921 VTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTWSSMIDGYVKSGEYNEALEIFDQMMRM 980
Query: 238 -DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
K + + +VS L ACA LGEL +GK +HRYI + + L T L+D YAKCG I
Sbjct: 981 GSSKANEVTMVSVLCACAHLGELNRGKVVHRYILDVHLPLTVILQTSLIDMYAKCGSIGD 1040
Query: 297 AIEIF--ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A +F S ++ + WNAM+ GLA HG R SL+ F +M E+ I PD +T L L C
Sbjct: 1041 AWGVFCGASVKKTDALMWNAMIGGLASHGFIRESLLLFHKMRESEIDPDEITFLCLLAAC 1100
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
SH GLV EA F ++ G + +HY CM D+L RAGL+++A + I +M + V
Sbjct: 1101 SHGGLVKEAWHFFTSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMLIKPTGSV 1159
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
L GC HGN+E+AE + +++L+P + G Y LA+VYA ++ +R +++
Sbjct: 1160 LGALFNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFGAARSMREAMEK 1219
Query: 475 GKIKKNAGCSLIQLNG 490
+KK AG S+I+LNG
Sbjct: 1220 KGVKKIAGHSIIKLNG 1235
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 12/289 (4%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
I N PS YN II ++ L ++M+ + P Y+ + ++ C
Sbjct: 465 IVQNGLIPSLMMYNNIIEGMCKEGRSEESLKLLAEMKDAGVEPSQYTLNCIYGCLAERCD 524
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI----LYRDVVSCNT 182
+ A + ++ GF + L+ C + DA + D++ R +VS
Sbjct: 525 FAGALDLLKKMRFYGFEPWIKHTTCLVKKLCENGKAVDACKYIDDVAGEGFLRHMVSYTA 584
Query: 183 LIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
I+G ++ + +LF D +++ L+ ++ + EA LF M+
Sbjct: 585 AIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEMVSKG 644
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KP S + + GE+++G + + ++ D T L+ + AI
Sbjct: 645 LKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASRRPSEAI 704
Query: 299 EIFESSQEK----NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+ + K N T+ A++ GL G +LVYF M E ++PD
Sbjct: 705 SRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYFREMEEKEMEPD 753
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 95 AVVLFSQMRTVSI-PPDFYSFPFLLRACSQLCSHS--LAQTIHSQVLKLGFICDVFVLNS 151
A +F ++R + + P+ Y++ LL A S+ S S L + ++ GF D F L
Sbjct: 160 ASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTP 219
Query: 152 LMHVYCVFHRLRDAQELFDEILYR---DVVSCNTLIDGYVKAGDLAHARQLFDRMPFR-- 206
++ VYC + A +F+EIL R D L+ + K G + A +L + + R
Sbjct: 220 VLQVYCNNGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERHI 279
Query: 207 --DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
+ ++ L+ G+ + + ++A QLF M + + PD IAL L
Sbjct: 280 RLNYKTFCVLIHGFVKESRIDKAFQLFEKMRRMGMNPD-IALYDVL 324
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 259/484 (53%), Gaps = 33/484 (6%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C +++ Q+HA F+ GLL P +L A T I YA S
Sbjct: 20 LRTCHDFQEVKQLHAQFVVSGLLGYHPL-CARRLLEAYVTMSQIY-----------YAFS 67
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF IP P F YNT+IR T+ D +++ F+L+ACS L +
Sbjct: 68 IFERIPSPDVFVYNTMIRGLTM---------------------DNFTYTFVLKACSHLKA 106
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H Q++K G + D + +SL+H+Y + DA+ + E + ++ N +I G
Sbjct: 107 PFEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMISG 166
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y+ G + AR++FD M +DA SW L+ GY ++ EA+ LF +MM I P+ AL
Sbjct: 167 YLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAAL 226
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS LSAC +LG L QG+ IH YI+ ++ + + L+T L+D YAK G I +F+
Sbjct: 227 VSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMAR 286
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+++ TW M+ A+HG F M+ I+P+ V + L CSHAG V+E R+
Sbjct: 287 RDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGRQY 346
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F +ME +G+ ++HYGCM DLLGRAGL+ +A ++I MP + +W LLG CR H
Sbjct: 347 FSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTHN 406
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+++ A E++M+L+P G +K+ ++ANA E+ KIR+ + ++ G S I
Sbjct: 407 DLKRGTWAFENLMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTCGSSFI 466
Query: 487 QLNG 490
++ G
Sbjct: 467 EVEG 470
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 265/504 (52%), Gaps = 74/504 (14%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+++ ++F I P+ FS+N + RA++ S P + L++ M PD YSFPF+L+A
Sbjct: 77 FAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKA 136
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFV-------------------------------- 148
C++L + IHS LKLG DVFV
Sbjct: 137 CARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVV 196
Query: 149 -LNSLMHVYCVFHRLRDAQELFDEIL---------------------------------- 173
NS++ Y HR A ++F E+L
Sbjct: 197 SWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGL 256
Query: 174 ------YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
DV ++LID Y K G + AR++FDR+P R+ V W +++AGYAQSD +EA
Sbjct: 257 FTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEA 316
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
I+LF M D + LSAC G L QG+ IH Y E N I +D L+
Sbjct: 317 IELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGM 376
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVT 346
Y+KCG I A+EIF + ++F+W+A++ GLAM+G +L FS+M + + I+P+ +T
Sbjct: 377 YSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEIT 436
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
LG L C+H G VD+ F+ M +Y ++ ++HYGCM DLLGRA L+ EA + I+ +
Sbjct: 437 FLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTL 496
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
P+ DV +W LL CR HGN+E+AE AA+ + +L+P G +L++VYA+A RW DV
Sbjct: 497 PIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVK 556
Query: 467 KIRRSLDAGKIKKNAGCSLIQLNG 490
++R+ + +IKK GCS ++++G
Sbjct: 557 RVRKDMATQRIKKQPGCSFVEIDG 580
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/417 (37%), Positives = 244/417 (58%), Gaps = 1/417 (0%)
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL-AQTI 133
+ ++N +I H + F M P ++ +L AC + L +
Sbjct: 86 TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQV 145
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H +V+ G + D+ V N+L+ +Y + A ++FD + R VVS +L+ G + G +
Sbjct: 146 HGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQV 205
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
AR LFDRMP RD VSW ++ GY + + EA+++F M ++ D +VS ++AC
Sbjct: 206 DEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITAC 265
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A+LG LE G+ + Y+ I++D+F+ L+D Y+KCG I A+++F+ ++ FTW
Sbjct: 266 AQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWT 325
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
A+++GLA++G ++ F RMI PD VT +G L C+HAGLVD+ R+ F M
Sbjct: 326 AIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEA 385
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
Y ++ + HYGC+ DLLGRAG I EAL+ I +MPM + +W LL CR+HGN EI E
Sbjct: 386 YNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGEL 445
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
AE +++L PE+ VY +L+++YA +RWEDV ++R ++ IKK GCSLI+++G
Sbjct: 446 VAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDG 502
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 145/352 (41%), Gaps = 40/352 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P T S+ +I + + A+ +F +M+ ++ D ++ ++ AC+Q
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + + + + + G D FV N+L
Sbjct: 268 LGALEMGEWVRVYMSRQGIKMDAFVGNAL------------------------------- 296
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G + A +F M RD +W ++ G A + EEAI++F M+ + PD
Sbjct: 297 IDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDE 356
Query: 244 IALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE-IF 301
+ + L+AC G +++G+ IE I + ++D + G I A++ I
Sbjct: 357 VTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTID 416
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ N W +L +HG + + R++E + V IL + + D
Sbjct: 417 QMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWED 476
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
R ME G+ KE GC L+ G+I E + + PM +++
Sbjct: 477 VRRLRHAIMEK--GIKKEP---GC--SLIEMDGIIHEFVAGDQSHPMSKEIY 521
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 159/392 (40%), Gaps = 88/392 (22%)
Query: 94 NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC----SHSLAQTIHSQVLKLGFICDVFVL 149
+AV +++M PD Y+FP LL+A ++ S + A+ +H+ V++LG + V
Sbjct: 2 DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
+SL+ Y A+ L E C+T V
Sbjct: 62 SSLVAAYTAGGDGAAARALVGE--------CDT-------------------------PV 88
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR-LGELEQGKNIHRY 268
+W L++G+ + + E+ F +M P + VS LSAC + ++ G +H
Sbjct: 89 AWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGR 148
Query: 269 IELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
+ + + D + LVD YA+C + +A ++F+ Q +++ +W ++L GLA RL
Sbjct: 149 VVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLA-----RL- 202
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
G VDEAR LFD M VS + M D
Sbjct: 203 -----------------------------GQVDEARDLFDRMPERDTVS-----WTAMID 228
Query: 389 LLGRAGLIEEALEMIKKMP---MGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE- 444
A EALEM ++M + D F ++ C G +E+ E ++ + +
Sbjct: 229 GYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKM 288
Query: 445 DGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
D V L D+Y+ I R+LD K
Sbjct: 289 DAFVGNALIDMYSKCG------SIERALDVFK 314
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 270/474 (56%), Gaps = 19/474 (4%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+ QI Q+HAH L G+ L L I L YA +F+
Sbjct: 1 MNQIKQLHAHCLRTGV---DETKDLLQRLLLIPN--------------LVYARKLFDLHR 43
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P F YN +I+++++ P ++VL++ + I P+ ++F F+ A + S +
Sbjct: 44 NPCIFLYNKLIQSYSVHHQPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRL 103
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+HSQ + GF D F +L+ Y L A+ +FDE+ RDV N +I GY + GD
Sbjct: 104 LHSQFFRSGFESDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGD 163
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF-CNMMDLDIKPDNIALVSALS 251
+ A +LFD MP ++ SW T+++G++Q+ EA+ +F C D +KP++I LVS L
Sbjct: 164 MKAAMELFDSMPNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLP 223
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF-ESSQEKNLF 310
ACA LGELE G+ + Y N + ++ ++ Y+KCG I+ A +F E ++NL
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLI 283
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+WN+M+ LA HG +L +++M++ +PD VT +G L+ C H G+V + ++L M
Sbjct: 284 SWNSMIGSLATHGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSM 343
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
E V+ +S +L+HYGCM DLLGR G ++EA ++IK MPM D VW LLG C HGNVEI
Sbjct: 344 EEVHKISPKLEHYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEI 403
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
AE A+E +MKL+P + G +++++YA ++W+ V+++R+ + + K AG S
Sbjct: 404 AEIASEALMKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 239/410 (58%), Gaps = 31/410 (7%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
N++IR + + LN++ +F+ M SI PD +FP +L+A +QLC + + IH V++
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
+GFICDV+ +L+H+YC + DA +LFDE+ R+ V+ N LI GY H R+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGY------THNRKF 171
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
+AI F M+ +P +V LSAC+ LG
Sbjct: 172 V-------------------------KAIDAFRGMLADGAQPSERTVVVVLSACSHLGAF 206
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
QGK IH +I N++R++ F+ T L+D YAKCG + ++FE +EKN++TWN ++ G
Sbjct: 207 NQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGY 266
Query: 320 AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
AM+G G +L FSRM+ KPD VT LG L C H GLV E R F M+ +G+
Sbjct: 267 AMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPR 326
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM 439
++HYGCM DLLGRAGL+EEALE+I+ M + D +W LL CR+HGN ++ E + ++
Sbjct: 327 IEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLI 386
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+L+P +G Y +L+++Y+ RW +V K+R + I+K GCS I++N
Sbjct: 387 ELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEIN 436
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 41/283 (14%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A +F+ +P + ++N +I +T + A+ F M P + +L A
Sbjct: 140 ISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSA 199
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L + + + IH + +VFV +L+ +Y + + +++F+EI ++V +
Sbjct: 200 CSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTW 259
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LI GY A + Q + A+Q F M+ + K
Sbjct: 260 NVLISGY-------------------------------AMNGQGDAALQAFSRMLMENFK 288
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQI-----RVDSFLSTGLVDFYAKCGYIN 295
PD + + L AC G + +G+ +++ + Q R++ + +VD + G +
Sbjct: 289 PDEVTFLGVLCACCHQGLVTEGR--WQFMSMKQQFGLQPRIEHY--GCMVDLLGRAGLLE 344
Query: 296 TAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
A+E+ +S S E + W A+L +HG +L R+IE
Sbjct: 345 EALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIE 387
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 177/503 (35%), Positives = 282/503 (56%), Gaps = 67/503 (13%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+++C + + Q+HA LT GL F + + L+ +L + F +YA +
Sbjct: 12 LQKCHNLNTLKQVHAQMLTTGLSFQT--YYLSHLLNTSSKFAS------------TYAFT 57
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLN-AVVLFSQMRT-VSIPPDFYSFPFLLRACSQL 124
IFN+IP P+ F YNT+I + T S ++ A L++ + T ++ P+ ++FP L +AC+
Sbjct: 58 IFNHIPNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACA-- 115
Query: 125 CSHSLAQ---TIHSQVLK-LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
SH Q +H+ VLK L D FV NSL++ Y
Sbjct: 116 -SHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFY------------------------ 150
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS-------------DQCEEA 227
K G L +R LFD++ D +W T++A YAQS D EA
Sbjct: 151 -------AKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEA 203
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+ LFC+M IKP+ + LV+ +SAC+ LG L QG H Y+ N ++++ F+ T LVD
Sbjct: 204 LHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDM 263
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y+KCG +N A ++F+ +++ F +NAM+ G A+HG G +L + M + PDG TI
Sbjct: 264 YSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATI 323
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
+ + CSH GLV+E ++F+ M+ V+G+ +L+HYGC+ DLLGRAG ++EA E ++ MP
Sbjct: 324 VVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMP 383
Query: 408 MGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
M + +W LLG ++HGN+E+ EAA +H+++L+PE G Y +L+++YA+ RW DV +
Sbjct: 384 MKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKR 443
Query: 468 IRRSLDAGKIKKNAGCSLIQLNG 490
+R + + K G SL+++NG
Sbjct: 444 VRMLMKDHGVDKLPGFSLVEING 466
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 290/563 (51%), Gaps = 94/563 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLL---FLSPCHILTTILYAITTFKPISSASSPTTDPL 61
+ ++ C T ++HQI A +T GL +++P I + +
Sbjct: 27 SLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFI----------------TACARLGGI 70
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A +F+ P+ ++N + R + + L+ VVLF++M P+ ++FP ++++C
Sbjct: 71 RRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSC 130
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC------------VFHRLRD----- 164
+ + + +H V K GF + FV +L+H+Y VF +RD
Sbjct: 131 ATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFA 190
Query: 165 ----------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA 208
A+ LFD RDVV N ++ GY++ GD+ AR+LFDRMP RD
Sbjct: 191 WTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDV 250
Query: 209 VSWGTLVAGYAQSDQCEEAIQLFCNM---------------------------------- 234
+SW T+++GYA + + E ++LF M
Sbjct: 251 MSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVL 310
Query: 235 --------MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
D + P++ +V+ L+AC+RLG+LE GK +H Y E + + F+ L+D
Sbjct: 311 VEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALID 370
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAKCG I A+++F+ K++ TWN ++ GLAMHG +L F RM A +PDGVT
Sbjct: 371 MYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVT 430
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L C+H GLV F M Y + +++HYGCM DLLGRAGLI++A+++++KM
Sbjct: 431 FVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKM 490
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
PM D +W+ LLG CR++ NVE+AE A + +++L+P + G + +++++Y + R +DV
Sbjct: 491 PMEPDAVIWAALLGACRMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVA 550
Query: 467 KIRRSLDAGKIKKNAGCSLIQLN 489
+++ ++ +K GCS+I N
Sbjct: 551 RLKVAMRDTGFRKVPGCSVIGCN 573
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 284/519 (54%), Gaps = 44/519 (8%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ + C+++K + Q+HA+ GL P +L+ S+ S P D L Y
Sbjct: 9 SSLLTNCRSLKNLKQVHAYVCKTGLD-TDPIIAGKLLLH--------SAVSVP--DALDY 57
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT-VSIPPDFYSFPFLLRACS 122
A +F + P P F +NT+IR +P N+++ F +MR ++ P D +SF FLL+A +
Sbjct: 58 ARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAA 117
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRL---------- 162
S +H Q + G +FV +L+ +Y VF +
Sbjct: 118 SYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNA 177
Query: 163 -----------RDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSW 211
+ A +F+ + +R++ S N ++ GY KAG+L AR+LF MP +D VSW
Sbjct: 178 VVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSW 237
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
T++ G+A + EA F + + ++P+ ++L ALSACA G +E GK +H +IE
Sbjct: 238 STMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEK 297
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLV 330
+ ++ L+D Y+KCG + A +FE EK ++ +W +M+ GLAMHG G ++
Sbjct: 298 SGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQ 357
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M E+ I+PDG+ + L CSHAGL+++ + F +M+ +Y + ++HYGCM DL
Sbjct: 358 LFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLY 417
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
GRAG +++A E I MP+ +W LLG C IHGNV++AE E + +L P + G +
Sbjct: 418 GRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHV 477
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+L+++YA A +W+DV +RRS+ ++ K G S+I+++
Sbjct: 478 LLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVD 516
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 283/527 (53%), Gaps = 59/527 (11%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+++ ++K++ Q +TK LF P ++ I +F +S S L YA +
Sbjct: 119 LQQLSSVKEVEQTQC-LITKSGLFNHP-----FVISKIISFLSLSPLGS-----LVYAQA 167
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL-- 124
IF + + F NT+IRA+ P+ A+ L++ M I D +++PF L+AC+++
Sbjct: 168 IFEDTAMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFTYPFGLKACARVLW 227
Query: 125 -------CSH----SLAQTIHSQVLKLGFICDVFVLNSLMHVY----------CVFHRLR 163
C+ IH ++ +LG D F+ NSL+++Y CVF +
Sbjct: 228 CNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARCVFDEMT 287
Query: 164 D---------------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDR 202
+ A L + ++VVS N LI Y++ G + A+ +F
Sbjct: 288 EKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKVVFQE 347
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQG 262
MP RDAVSW +++AGY Q A+ LF M +++ +I L+S L ACA G LE G
Sbjct: 348 MPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLGACAETGALEIG 407
Query: 263 KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
+ IH ++ + +++ +LS LVD YAKCG++N A E+F + K++ WNAM+V LA+H
Sbjct: 408 RKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVH 467
Query: 323 GLGRLSLVYFSRMIEARI---KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
G +L FS M E + +P+ VT +G L+ CSH GLVDE R F+ M + Y + +
Sbjct: 468 GYCEEALRLFSTM-EMSVDGARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEYKIMPD 526
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM 439
+KHYGCM DLL R GL++EA MIK MP + +W LLG CR+H +V++AE + + +
Sbjct: 527 IKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLG 586
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
K++P G Y +L+++YA A RW DV ++R + + K G S I
Sbjct: 587 KMEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKPGSSHI 633
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 265/487 (54%), Gaps = 12/487 (2%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ + +CKTI+++ +IHA LT GL P + F+ + P
Sbjct: 24 HHLLTQCKTIRELQRIHAQALTHGL---HP----NQQSISCKIFRSYAEFGRPAD----- 71
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ IP+P S+ +++ H A+ +FS PD ++ L A
Sbjct: 72 AGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGG 131
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H + + G ++ V N+L+ +YC + A+ +FD +L +D V+ ++
Sbjct: 132 LGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSM 191
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY+K + A F +MP + VSW L+ G+ Q Q +A++LF M+ +P++
Sbjct: 192 LYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNH 251
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I +V LSACA +G L+ G+ IH Y + + ++ L+D YAK G I +A +FE
Sbjct: 252 ITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEE 311
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
Q K+ FTW M+ + G GR ++ F M+ + I P+ VT + L CSHAGL+ E
Sbjct: 312 VQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEG 371
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+LFD+M VY + L+HYGCM DLLGR GL+EEA +I M + D+ +W LL C
Sbjct: 372 RELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACL 431
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HGN +AE A ++K +P D GVY +L ++YA ++RW++ + +R+ + + KI K GC
Sbjct: 432 AHGNDRLAEIAGMEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGC 491
Query: 484 SLIQLNG 490
S I+++G
Sbjct: 492 SWIEVDG 498
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 260/481 (54%), Gaps = 44/481 (9%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
+ I++ QIHA + G++ + +Y T + S D +F+
Sbjct: 124 QGIREGQQIHARSIKTGMVGFN--------VYVSNTLMRLYSVCGSIHD----VQKVFDE 171
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P+ S+ T+I+A T AV F +M + + D + +L ACS L +L
Sbjct: 172 CPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLG 231
Query: 131 QTIHSQVLK-LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
Q +HS + + DVFV N L+D Y+K
Sbjct: 232 QKVHSYIRHYIDMKADVFV-------------------------------GNALLDMYLK 260
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
DL A ++FD MP ++ V+W +++G A + EA+ F M D +KPD + LV
Sbjct: 261 CDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGV 320
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L++CA LG LE GK +H Y+ N I D F+ L+D YAKCG I+ A +FES + +++
Sbjct: 321 LNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDV 380
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+++ AM+ GLA+HG + FS M I+P+ VT LG L+ CSH GLV E +K F +
Sbjct: 381 YSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQ 440
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M Y + + +HYGCM DLLGRAGL++EA E+I KM + DVF LLG CRIHGNV+
Sbjct: 441 MSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVD 500
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
I E+ + + +L P++ G Y ++ ++Y++ RW+D +KIR+++ K++K GCSLI+++
Sbjct: 501 IGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVD 560
Query: 490 G 490
G
Sbjct: 561 G 561
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 209/430 (48%), Gaps = 48/430 (11%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ CK+I + QIH G+ +P L ++ + F SS+SSP L Y S
Sbjct: 13 LNSCKSISHLKQIH------GVAIKTPSLSLPNLIPKLI-FLSSSSSSSPD---LFYIRS 62
Query: 67 IFNNIPYPSTFSY---NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
I + + F N IIR+ + S L+ + ++M V + PD ++ P +L+A +
Sbjct: 63 ILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALAL 122
Query: 124 LCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ Q IH++ +K G + +V+V N+LM +Y V + D Q
Sbjct: 123 IQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQ---------------- 166
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++FD P RD VSW TL+ + ++ A++ F M DL ++ D
Sbjct: 167 ---------------KVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRAD 211
Query: 243 NIALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
LV LSAC+ LG+L G+ +H YI ++ D F+ L+D Y KC +N+A ++F
Sbjct: 212 GRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVF 271
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ KN+ TWNAM+ GLA G R +L F M + +KPD VT++G L C++ G+++
Sbjct: 272 DEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLE 331
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ + M + ++ + + D+ + G I+EA + + M DV+ ++ ++ G
Sbjct: 332 IGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFRVFESMKR-RDVYSYTAMIFG 389
Query: 422 CRIHGNVEIA 431
+HG A
Sbjct: 390 LALHGEANWA 399
>gi|357120906|ref|XP_003562165.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Brachypodium distachyon]
Length = 529
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 267/490 (54%), Gaps = 20/490 (4%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C T+ ++ Q+H + GL + I + + A K ++YA +
Sbjct: 45 QCATMARLRQLHGALVKSGL---AKDPIAASRVVAFLAGK---------GRDVAYAARLV 92
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ P P+ F +NT IRA + P AV LF M PP+ +FP L + ++L +
Sbjct: 93 RHHPRPNAFMWNTAIRALSDGPGPDAAVALFLDMLRSPTPPERRTFPSLFASYARLGVRA 152
Query: 129 ----LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR-DVVSCNTL 183
+H VLKLG D +V NS++ +Y + R +A L+ + DVV+CN+
Sbjct: 153 DDDGAGAALHGMVLKLGLAGDAYVRNSMIAMYASWGRADEALLLYGQCGQAFDVVACNSA 212
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I +AG + AR++FD MP R +W +V+ Y+++ +C++A++LF M ++P+
Sbjct: 213 IVALTRAGRVDEAREVFDAMPARTVATWSAMVSAYSRAARCQDAVELFSAMQASGVEPNA 272
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVS L CA LG LEQG +H YI+ + + +++ + T LVD Y KCG I+ A +F++
Sbjct: 273 NVLVSVLGCCAALGALEQGAWVHAYIDKHGVAMNALVVTALVDMYCKCGSIHKARHVFDA 332
Query: 304 SQEKNLF---TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
S+ + L +WNAM++GLA+HG + +L FS + + PD VT + L+ H+G+
Sbjct: 333 SRSQGLAKLSSWNAMMLGLAVHGQCQEALALFSELETYGLSPDNVTFITILMAYGHSGMA 392
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DEA+ LF ME Y V+ ++HYGC+ D L RAG + EA ++I+ MPM D +W LL
Sbjct: 393 DEAKALFSAMEREYAVTPGIEHYGCLVDALARAGRLGEAEDVIRTMPMRPDTAIWGALLS 452
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GCR+HG+ E AA M+ P+D G Y + A V A V +R + + K
Sbjct: 453 GCRLHGDAEAGARAASGAMECDPQDSGAYVLAASVLARDGEVGAGVSVRERMRVEGVAKV 512
Query: 481 AGCSLIQLNG 490
GCS+I++NG
Sbjct: 513 PGCSMIEVNG 522
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 278/512 (54%), Gaps = 44/512 (8%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CK ++ + QIH F+ G+ T Y I K I + +D L YA +
Sbjct: 182 CKNLRALTQIHGFFIKSGV---------DTDSYFIG--KLILHCAISISDALPYARRLLL 230
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCSHS 128
P P F +NT++R ++ P N+V +F +M R I PD +SF F+++A + S
Sbjct: 231 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLR 290
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVY----CV-FHR---------------------- 161
+H Q LK G +FV +L+ +Y CV F R
Sbjct: 291 TGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACF 350
Query: 162 ----LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
+ A+E+FD++L R+ S N ++ GY+KAG+L A+++F MP RD VSW T++ G
Sbjct: 351 RGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVG 410
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
++ + E+ F ++ +++P+ ++L LSAC++ G E GK +H ++E +
Sbjct: 411 FSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWI 470
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
++ L+D Y++CG + A +FE QEK ++ +W +M+ GLAMHG G ++ F+ M
Sbjct: 471 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMT 530
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
E+ + PD ++ + L CSHAGL+ E F +M+ VY + ++HYGCM DL GR+G +
Sbjct: 531 ESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKL 590
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
++A I +MP+ VW LLG C HGN+E+AE + + +L P + G +L++VY
Sbjct: 591 QKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVY 650
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
A A +W+DV IR+S+ +IKK SL+++
Sbjct: 651 ATAGKWKDVASIRKSMIVQRIKKITAWSLVEV 682
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 259/432 (59%), Gaps = 7/432 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLRACS 122
A +F+ + + S+N +I + +A+ F +M+ + PD + L AC+
Sbjct: 251 AKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACT 310
Query: 123 QLCSHSLAQTIHSQVLK-LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
L + L IH+ V K LGF + N+L+ +Y L A+ +FDE+ ++V+
Sbjct: 311 ALKNLELGDEIHNYVRKELGFT--TRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWT 368
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++I GY+ GDL AR LFD+ P RD V W ++ GY Q ++A+ LF M IKP
Sbjct: 369 SMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKP 428
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D +V+ L+ CA+LG LEQGK IH Y++ N+I +D + T L++ Y+KCG ++ ++EIF
Sbjct: 429 DKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIF 488
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
++K+ +W +++ GLAM+G +L FS M KPD +T +G L CSH GLV+
Sbjct: 489 YELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVE 548
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV---WSGL 418
E R+ F+ M+ V+ + +++HYGC+ DLLGRAGL++EA E+I+++P+ V + L
Sbjct: 549 EGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGAL 608
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CRIH NV++ E A+ + ++ D ++ +LA++YA+ DRWED K+RR + +K
Sbjct: 609 LSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVK 668
Query: 479 KNAGCSLIQLNG 490
K GCSLI+++G
Sbjct: 669 KMPGCSLIEVDG 680
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 206/479 (43%), Gaps = 91/479 (18%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ CK++ Q+ QI + GL T K ++ + + L YA
Sbjct: 104 LRNCKSMDQLKQIQSQIFRIGLEGDRD-----------TINKLMAFCADSSLGNLRYAEK 152
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IFN + PS F YN +++ + ++LF Q+R + PD +++PF+L+A L
Sbjct: 153 IFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRD 212
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ + ++K G D +V NSL+ +Y + +A++LFDE+ RD VS N +I G
Sbjct: 213 VRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISG 272
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YV+ A F M Q + E KPD +
Sbjct: 273 YVRCRRFEDAINTFREM----------------QQEGNE--------------KPDEATV 302
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS LSAC L LE G IH Y+ ++ + + L+D YAKCG +N A IF+
Sbjct: 303 VSTLSACTALKNLELGDEIHNYVR-KELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSM 361
Query: 307 KNLFTWNAMLVGLAMHGLGRLS-----------LVYFSRMIEA----------------- 338
KN+ W +M+ G G R + +V ++ MI
Sbjct: 362 KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM 421
Query: 339 ---RIKPDGVTILGALVGCSHAGLVDEARKL---FDE----MESVYGVSKELKHYGCMAD 388
+IKPD T++ L GC+ G +++ + + DE M+ V G + + +
Sbjct: 422 QIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA--------LIE 473
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL--KPED 445
+ + G ++++LE+ ++ D W+ ++ G ++G A + ++ KP+D
Sbjct: 474 MYSKCGCVDKSLEIFYELE-DKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDD 531
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 159/431 (36%), Positives = 255/431 (59%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS A + P S+ ++I A++ AV F M + I PD + +L A
Sbjct: 190 LSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSA 249
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVS 179
CSQL L ++HS V + G ++ +L+ +Y A+E+FD + R S
Sbjct: 250 CSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQS 309
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N +IDGY K G + AR LFD+M RD +++ +++ GY S Q EA+ LF NM D+
Sbjct: 310 WNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDL 369
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ DN +VS LSACA LG L QG+ +H IEL + D ++ T L+D Y KCG +N A
Sbjct: 370 RVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATI 429
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ ++++ W AM+ GLA +G+G+ L YF +M +P+ V+ + L CSH+ L
Sbjct: 430 VFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCL 489
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
++E R FDEM +Y + +++HYGCM DLLGR+GL++EA++++K MPM + +W+ +L
Sbjct: 490 LNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASIL 549
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H +++A+ AAEH++K++P++ VY L ++ ++ +WED KIR ++ ++KK
Sbjct: 550 SACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKK 609
Query: 480 NAGCSLIQLNG 490
AG S + + G
Sbjct: 610 TAGYSSVTVAG 620
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 232/474 (48%), Gaps = 59/474 (12%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPC--HILTTILYAITTFKPISSASSPTTDPL--SYALS 66
+T++Q ++HAH T G L P H+L +++ + P +DPL YAL
Sbjct: 10 RTVRQAAELHAHLTTSGRLLHPPSAHHLLNSLVNCL-----------PPSDPLHLRYALH 58
Query: 67 IFNNIPYPSTFSYNTIIRA----HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
+F+ +P STF ++T +RA T P VLF +MR ++ PD ++F FL + S
Sbjct: 59 LFDRMP-ASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSS 117
Query: 123 QLCSHSLAQT-IHSQVLKLGFICDV-FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+L T +H+ L+ FV NSL+H+Y D + FDEI +D VS
Sbjct: 118 SSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSW 177
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+I G K G L+ AR L + P RD +SW +L+A Y+++D+ +EA+ F NM+ I
Sbjct: 178 TMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIA 237
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--------- 291
PD++ ++ LSAC++L +LE G ++H ++ + + L L+D YAKC
Sbjct: 238 PDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREV 297
Query: 292 -----------------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
G+++ A +F+ + +++ T+N+M+ G G R +
Sbjct: 298 FDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREA 357
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
L+ F M ++ D T++ L C+ G + + R L +E + V ++ + D
Sbjct: 358 LLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIE-LRLVETDIYIGTALLD 416
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
+ + G + EA + ++M DV W+ ++ G +G + +A E+ +++
Sbjct: 417 MYMKCGRVNEATIVFQRMG-KRDVHAWTAMIAGLAFNG---MGKAGLEYFYQMR 466
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 191/424 (45%), Gaps = 33/424 (7%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
N+I S+N+I+ + AV QM P SF LL +
Sbjct: 954 LNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDW 1013
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L IH V KLGF C S +HV TLID Y
Sbjct: 1014 QLGVQIHGIVHKLGFSC------SSVHVQ------------------------TTLIDMY 1043
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
K H+ +F+ +P +L+ + + + A+++ M+ + PD++
Sbjct: 1044 GKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFS 1103
Query: 248 SALSACARLGE--LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+ + A + L + +H + +D + + L+ YA G ++++ IFE
Sbjct: 1104 ATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLL 1163
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+ N+ + A++ A +G G ++ F +M+ + +KPD VT L A+ GC AG+ +E R
Sbjct: 1164 DPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRL 1223
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+ + M + + + +H+ CM +LL R G ++EA+EM+++ P+ WS LL C+ H
Sbjct: 1224 VIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAH 1283
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G + + AA ++ + +D +++ + + E ++I+ + ++KK +G SL
Sbjct: 1284 GENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKK-SGHSL 1342
Query: 486 IQLN 489
I+++
Sbjct: 1343 IEVS 1346
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 107/285 (37%), Gaps = 32/285 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+LS+F +P +T N ++R + F MR + + S+ + ++ C Q
Sbjct: 847 SLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQ 906
Query: 124 LCSH-SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ +H VLK G+I L+ N+
Sbjct: 907 NGEWLEQGRQLHGVVLKAGWIPSNIFLS------------------------------NS 936
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y GD + + + D +SW ++++ YA +EA+ M+ P
Sbjct: 937 LVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPS 996
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF-LSTGLVDFYAKCGYINTAIEIF 301
+ VS L+ + G+ + G IH + S + T L+D Y KC + ++ IF
Sbjct: 997 IRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIF 1056
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
L N+++ + +L MI + PD VT
Sbjct: 1057 NEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVT 1101
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+CS A +H +VL LG C+ FV ++L++ Y + LF E+ ++ CN +
Sbjct: 806 VCSTYEALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVV 865
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ G G+L EE I F +M ++ +
Sbjct: 866 LRGL---GNL----------------------------KLTEELICCFLDMRRQYLELNG 894
Query: 244 IALVSALSACARLGE-LEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
++ A+ C + GE LEQG+ +H + + I + FLS LVD Y+ G ++
Sbjct: 895 LSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKAL 954
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
+++ +WN++L A G + ++ Y +M+
Sbjct: 955 NDILSEDVISWNSILSMYADRGHMKEAVYYLKQML 989
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 284/484 (58%), Gaps = 13/484 (2%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
K C T+K + +IH+ + GL T I F +SP D ++YA +
Sbjct: 30 KNCTTMKDLKKIHSQLIKTGL------AKDTNAASRILAF-----CASPAGD-INYAYLV 77
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLRACSQLCS 126
F I P+ F++NTIIR + S P N++ L+ M T + P ++P + +A +QL
Sbjct: 78 FVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDL 137
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S +H +++KLG D F+ N+++ +Y +A+++FD + D+V+ NT+I G
Sbjct: 138 ASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMG 197
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
K G + +R+LFD+M R+AVSW ++++GY ++ + +A++LF M I+P +
Sbjct: 198 VAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTM 257
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS L+ACA LG + QG+ IH Y+ + ++ + T ++D Y+KCG I+ A+++F+S+
Sbjct: 258 VSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPR 317
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+ L WN+M++GLAM+G +L FS + + ++PD V+ + L C H G+VD+A+
Sbjct: 318 RGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDY 377
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M Y + +KH+ CM D+LGRAGL+EEA E+I+ M + D +W LL C +G
Sbjct: 378 FLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYG 437
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N+++A+ AA H+++L P + + ++A+ YA A+ +E+ +K R +L I K GCS I
Sbjct: 438 NIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCI 497
Query: 487 QLNG 490
++ G
Sbjct: 498 EVGG 501
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 280/491 (57%), Gaps = 14/491 (2%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L + + +CK+I ++ Q+HA ++ GL P + I F +S++ +
Sbjct: 16 NLLSLLDKCKSILELKQLHAVVISCGLSQDDP------FISKILCFSALSNSGD-----I 64
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+Y+ +F+ + P+ FS+NTIIR ++ +P+ ++ +F +M + + PD+ ++PFL++A
Sbjct: 65 NYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKAS 124
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
++L + ++H+ ++K G D F+ NSL+H+Y AQ++FD I ++VVS N
Sbjct: 125 ARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWN 184
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+++DGY K G++ A++ F+ M +D SW +L+ GY ++ + EA+ +F M K
Sbjct: 185 SMLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKA 244
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + +VS ACA +G LE+G+ I++YI N + + L T LVD YAKCG I A+ IF
Sbjct: 245 NEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIF 304
Query: 302 E--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
S + ++ WNA++ GLA HGL SL F M I PD VT L L C+H GL
Sbjct: 305 RRVSKSQTDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGL 364
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V EA F+ + S G++ +HY CM D+L RAG + A + I +MP + LL
Sbjct: 365 VKEAWFFFESL-SKCGMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALL 423
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
GC H N+ +AE +++L+P G Y L+++YA RW+D +R +++ +KK
Sbjct: 424 SGCINHRNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKK 483
Query: 480 NAGCSLIQLNG 490
+ G S ++++G
Sbjct: 484 SPGFSFVEISG 494
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 168/489 (34%), Positives = 277/489 (56%), Gaps = 16/489 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ +C + Q+ Q HA L GL H +L + F S S LS+A
Sbjct: 11 LLHKCINMNQLKQAHAQVLKSGL------HNSNFVLSRLLNFCAESRNGS-----LSHAF 59
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F +I +P+ +NT+I+A L LNA+ +FS + I PD Y+ P++L+A +++
Sbjct: 60 KLFQHIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMT 119
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ L ++IH+ +KLG + FV NSL+ +Y F +R A+++FDE+ VS +I
Sbjct: 120 NIHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIY 179
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY GD+ AR+LFD +D WG +++GY Q++ +E + +F M +++PD
Sbjct: 180 GYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAI 239
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ LSACA +G L+ G IHRY+ + + +STGL+D YAKCG+++ A +F
Sbjct: 240 IVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMS 299
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+++ WNAM+ G+AM G G ++ F M +A IKPD +T + L CS++G+VDE +
Sbjct: 300 QRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIR 359
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG----DVFVWSGLLGG 421
+++ M +V+ + + +HYGC+ DLL R G EEA +I+++P + W L
Sbjct: 360 IWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSA 419
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C HG + AE AAE + +L+ G Y +L+++YA + ED ++R + ++K
Sbjct: 420 CCKHGQTQQAEVAAERLFQLERHSGA-YVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVP 478
Query: 482 GCSLIQLNG 490
GCS I++NG
Sbjct: 479 GCSSIKVNG 487
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 281/545 (51%), Gaps = 81/545 (14%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++ + ++HA L +GL P H + ++ + + + P + A N P
Sbjct: 39 LRHVQELHAQLLKQGL-HRDP-HTASKLIASYALLRRV-----PACRCVFSAAVALPNSP 91
Query: 73 YPSTFSYNTII--RAHTLFSSPLNAVVLFSQMRTVSIP---PDFYSFPFLLRACSQLCSH 127
+PS+ + T RA+ L S P A+ +F + +P +++ FL++A +
Sbjct: 92 FPSSTTLLTKTLLRAYALNSLPHAALAVF-----LDVPLRQRGTFTYSFLIKALAA-AGL 145
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT----- 182
+ + H+ V+KLG D FV N+L+ Y L DA+++FDE+ RDVVS NT
Sbjct: 146 TPVRGAHAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAM 205
Query: 183 --------------------------LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
++DGY KAG+ A +LF RMP R+ VSW T+V+
Sbjct: 206 VRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVS 265
Query: 217 GY-------------------------------AQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y AQ EEA +LF MMD I+ D IA
Sbjct: 266 AYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIA 325
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS- 304
+VS L+ACA G L GK IHR++ ++ + + L+D + KCG +N A IF++
Sbjct: 326 VVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEI 385
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
EK+L +WN ++ G AMHG G +L F++M + PD VT++ L C+H GLV+E R
Sbjct: 386 VEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGR 445
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F ME+ YG+ +++HYGCM DLLGR GLI+EA++MIK+MP + +W LL CR+
Sbjct: 446 RFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRL 505
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H NVE AE A + L+P G Y VL+++YA A +W D+ K R + +K AG S
Sbjct: 506 HKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSS 565
Query: 485 LIQLN 489
I+LN
Sbjct: 566 WIELN 570
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 281/545 (51%), Gaps = 81/545 (14%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++ + ++HA L +GL P H + ++ + + + P + A N P
Sbjct: 111 LRHVQELHAQLLKQGL-HRDP-HTASKLIASYALLRRV-----PACRCVFSAAVALPNSP 163
Query: 73 YPSTFSYNTII--RAHTLFSSPLNAVVLFSQMRTVSIP---PDFYSFPFLLRACSQLCSH 127
+PS+ + T RA+ L S P A+ +F + +P +++ FL++A +
Sbjct: 164 FPSSTTLLTKTLLRAYALNSLPHAALAVF-----LDVPLRQRGTFTYSFLIKALAA-AGL 217
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT----- 182
+ + H+ V+KLG D FV N+L+ Y L DA+++FDE+ RDVVS NT
Sbjct: 218 TPVRGAHAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAM 277
Query: 183 --------------------------LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
++DGY KAG+ A +LF RMP R+ VSW T+V+
Sbjct: 278 VRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVS 337
Query: 217 GY-------------------------------AQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y AQ EEA +LF MMD I+ D IA
Sbjct: 338 AYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIA 397
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS- 304
+VS L+ACA G L GK IHR++ ++ + + L+D + KCG +N A IF++
Sbjct: 398 VVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEI 457
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
EK+L +WN ++ G AMHG G +L F++M + PD VT++ L C+H GLV+E R
Sbjct: 458 VEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGR 517
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F ME+ YG+ +++HYGCM DLLGR GLI+EA++MIK+MP + +W LL CR+
Sbjct: 518 RFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRL 577
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H NVE AE A + L+P G Y VL+++YA A +W D+ K R + +K AG S
Sbjct: 578 HKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSS 637
Query: 485 LIQLN 489
I+LN
Sbjct: 638 WIELN 642
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 224/345 (64%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
DVF+ N ++ Y + +A+++FD + RD+VS NT+I GY G++ AR++FD
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RDA SW ++++ YA+S + +EA++L+ M I PD I LVS +SAC+ LG L G
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
+HR++E N+I +D L T L+D YAKCG I +A +F+ EK++ TW++M++GLA HGL
Sbjct: 142 VHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGL 201
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
G SL FS+MI +KP+GVT +G L+ C+H GLV E +K F M V+G+ ++HYG
Sbjct: 202 GHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYG 261
Query: 385 CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
CM DLLGR+G +EEA ++I+ M D +W LLG CRIH NVEIAE A + L P
Sbjct: 262 CMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPL 321
Query: 445 DGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
G Y +L+++YA A+ WE V ++R+++ I++ G S I+ +
Sbjct: 322 GDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWD 366
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 33/261 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ FS++++I A+ A+ L+ +M SI PD + ++ ACS
Sbjct: 73 AREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSD 132
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + ++ +H V D+ + +L+ +Y + AQ +FD
Sbjct: 133 LGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFD------------- 179
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
RMP +D +W +++ G A E++ LF M+ +KP+
Sbjct: 180 ------------------RMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNG 221
Query: 244 IALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ V L AC +G + +GK R + E++ I +VD + G++ A ++
Sbjct: 222 VTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIR 281
Query: 303 S-SQEKNLFTWNAMLVGLAMH 322
S + E + W A+L +H
Sbjct: 282 SMTFEPDTIIWRALLGACRIH 302
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 285/490 (58%), Gaps = 14/490 (2%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + + +CK++ ++ ++HA ++ GL H + I FK +S ++ + +
Sbjct: 16 TLLSLLDKCKSMLELKKLHAIGISYGL-----SHEYSFI------FKILSFSALSNSGDI 64
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
Y+ +F+ I P+ FS+N IIR ++ +P++++ +F +M + PD+ ++PFL++A
Sbjct: 65 DYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKAS 124
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
++L ++H+Q++K G D F+ NSL+H+Y + A ++F+ + +++VS N
Sbjct: 125 ARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWN 184
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+++DGY K G++A A+++F+ M RD SW + + GY ++ + EA+ +F M + K
Sbjct: 185 SMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKA 244
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + +VS LSACA LG L++G+ +H+YI N + + L T LVD YAKCG I A+ +F
Sbjct: 245 NEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVF 304
Query: 302 E--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
S + ++F WNAM+ GLA HGL SL F M A I+ D +T L L C+H GL
Sbjct: 305 RGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGL 364
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V EA F+ + G++ +HY CM D+L RAG + A + I ++P+ + +
Sbjct: 365 VKEAWNFFESLVK-RGMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIF 423
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
GC H N ++AE +++L P + G Y L++VYA RW+D +R +++ +KK
Sbjct: 424 SGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKK 483
Query: 480 NAGCSLIQLN 489
+ G S ++++
Sbjct: 484 SPGFSFVEIS 493
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 273/520 (52%), Gaps = 47/520 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L IK+C T K + A + L C ++ + A T+FK L
Sbjct: 30 NLKKIIKQCSTPKLLESALAAMIKTSLN--QDCRLMNQFITACTSFKR-----------L 76
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A+S + P+ F YN + + S P+ ++ L+ +M S+ P Y++ L++A
Sbjct: 77 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 136
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV--- 178
S + +++ + + K GF V + +L+ Y R+R+A+++FDE+ RD +
Sbjct: 137 S--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWT 194
Query: 179 ----------------------------SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
+ N LI+GY+ G+L A LF++MP +D +S
Sbjct: 195 TMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIIS 254
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W T++ GY+Q+ + EAI +F MM+ I PD + + + +SACA LG LE GK +H Y
Sbjct: 255 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 314
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
N +D ++ + LVD Y+KCG + A+ +F + +KNLF WN+++ GLA HG + +L
Sbjct: 315 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALK 374
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F++M +KP+ VT + C+HAGLVDE R+++ M Y + ++HYG M L
Sbjct: 375 MFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 434
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
+AGLI EALE+I M + +W LL GCRIH N+ IAE A +M L+P + G Y
Sbjct: 435 SKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF 494
Query: 451 VLADVYANADRWEDVVKIR-RSLDAGKIKKNAGCSLIQLN 489
+L +YA +RW DV +IR R + G K G S I+++
Sbjct: 495 LLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 534
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 241/420 (57%), Gaps = 32/420 (7%)
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR 161
M + P ++F L++ACS + + +H + K GF VFV +L+ Y +
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR--------------- 206
+ +A+ +FDE+ RDV + T+I + + GD++ ARQLFD MP R
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 207 ----------------DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
D +SW T++A Y+Q+ Q EA+ +F M I PD + + + +
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
SACA LG L+ GK IH Y +D ++ + L+D YAKCG ++ ++ +F ++KNLF
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLF 240
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
WN+++ GLA+HG +L FSRM +IKP+GVT + L C+HAGLV+E RK F M
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSM 300
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+ + E++HYGCM DLLG+AGL+E+ALE+++ M M + +W LLGGC++H N++I
Sbjct: 301 SRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKI 360
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL-DAGKIKKNAGCSLIQLN 489
A+ A L+P + G Y +L ++YA +RW +V IR ++ + G K + G S I+++
Sbjct: 361 AQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEMD 420
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 68/300 (22%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ---------------- 101
T +S A +F+ +P +T S+N +I ++ + +A +LFSQ
Sbjct: 89 TGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACY 148
Query: 102 ---------------MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDV 146
M+T I PD + ++ AC+ L + L + IH +++GF DV
Sbjct: 149 SQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDV 208
Query: 147 FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR 206
++ + LID Y K G L + +F ++ +
Sbjct: 209 YI-------------------------------GSALIDMYAKCGSLDKSLVVFFKLRKK 237
Query: 207 DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH 266
+ W +++ G A EEA+ +F M IKP+ + +S L AC G +E+G+
Sbjct: 238 NLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRK-- 295
Query: 267 RYIELNQ---IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMH 322
R++ +++ I + +VD K G + A+E+ S + E N W A+L G +H
Sbjct: 296 RFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLH 355
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 260/432 (60%), Gaps = 7/432 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLRACS 122
A +F+ + + S+N +I + +A+ F +M+ + PD + L AC+
Sbjct: 297 AKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACT 356
Query: 123 QLCSHSLAQTIHSQVLK-LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
L + L IH+ V K LGF + N+L+ +Y L A+ +FDE+ ++V+
Sbjct: 357 ALKNLELGDEIHNYVRKELGFT--TRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWT 414
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++I GY+ GDL AR LFD+ P RD V W ++ GY Q ++A+ LF M +KP
Sbjct: 415 SMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKP 474
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D +V+ L+ CA+LG LEQGK IH Y++ N+I +D + T L++ Y+KCG ++ ++EIF
Sbjct: 475 DKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIF 534
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
++K+ +W +++ GLAM+G +L FS M KPD +T +G L CSH GLV+
Sbjct: 535 YELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVE 594
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGL 418
E R+ F+ M+ V+ + +++HYGC+ DLLGRAGL++EA E+I+++P+ V ++ L
Sbjct: 595 EGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGAL 654
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CRIH NV++ E A+ + ++ D ++ +LA++YA+ DRWED K+RR + +K
Sbjct: 655 LSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVK 714
Query: 479 KNAGCSLIQLNG 490
K GCSLI+++G
Sbjct: 715 KMPGCSLIEVDG 726
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 206/479 (43%), Gaps = 91/479 (18%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ CK++ Q+ QI + GL T K ++ + + L YA
Sbjct: 150 LRNCKSMDQLKQIQSQIFRIGLEGDRD-----------TINKLMAFCADSSLGNLRYAEK 198
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IFN + PS F YN +++ + ++LF Q+R + PD +++PF+L+A L
Sbjct: 199 IFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRD 258
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ + ++K G D +V NSL+ +Y + +A++LFDE+ RD VS N +I G
Sbjct: 259 VRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISG 318
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YV+ A F M Q + E KPD +
Sbjct: 319 YVRCRRFEDAINTFREM----------------QQEGNE--------------KPDEATV 348
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS LSAC L LE G IH Y+ ++ + + L+D YAKCG +N A IF+
Sbjct: 349 VSTLSACTALKNLELGDEIHNYVR-KELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSM 407
Query: 307 KNLFTWNAMLVGLAMHGLGRLS-----------LVYFSRMIEA----------------- 338
KN+ W +M+ G G R + +V ++ MI
Sbjct: 408 KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM 467
Query: 339 ---RIKPDGVTILGALVGCSHAGLVDEARKL---FDE----MESVYGVSKELKHYGCMAD 388
R+KPD T++ L GC+ G +++ + + DE M+ V G + + +
Sbjct: 468 QIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA--------LIE 519
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL--KPED 445
+ + G ++++LE+ ++ D W+ ++ G ++G A + ++ KP+D
Sbjct: 520 MYSKCGCVDKSLEIFYELE-DKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDD 577
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/429 (37%), Positives = 242/429 (56%), Gaps = 31/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A +F +P S+N II ++L S A+ F++M+ I P+ + +L A
Sbjct: 272 VNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPA 331
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + Q IH ++ GF + DVV
Sbjct: 332 CAHLFALEQGQQIHGYAIRSGFESN------------------------------DVVG- 360
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N L++ Y K G++ A +LF+RMP ++ V+W +++GY+Q EA+ LF M IK
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIK 420
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD+ A+VS L ACA LEQGK IH Y + + + TGLVD YAKCG +NTA ++
Sbjct: 421 PDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKL 480
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE E+++ +W M++ +HG G +L FS+M E K D + L CSHAGLV
Sbjct: 481 FERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLV 540
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F M+S YG++ +L+HY C+ DLLGRAG ++EA +IK M + D VW LLG
Sbjct: 541 DQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLG 600
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIH N+E+ E AA+H+ +L P++ G Y +L+++YA A RWEDV K+R+ + +KK
Sbjct: 601 ACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQ 660
Query: 481 AGCSLIQLN 489
GCS++ ++
Sbjct: 661 PGCSVVAVH 669
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 180/380 (47%), Gaps = 47/380 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P S+N II ++ P A+ LFS+M+ I P+ + ++
Sbjct: 171 LENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPV 230
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + IH ++ G DV V+N L+++
Sbjct: 231 CAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNM------------------------- 265
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
Y K G++ A +LF+RMP RD SW ++ GY+ + Q EA+ F M IK
Sbjct: 266 ------YAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P++I +VS L ACA L LEQG+ IH Y + + + LV+ YAKCG +N+A ++
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKL 379
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +KN+ WNA++ G + HG +L F M IKPD I+ L C+H +
Sbjct: 380 FERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439
Query: 361 DEARKLFD-------EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
++ +++ E V G + D+ + G + A ++ ++MP DV
Sbjct: 440 EQGKQIHGYTIRSGFESNVVVGTG--------LVDIYAKCGNVNTAQKLFERMPE-QDVV 490
Query: 414 VWSGLLGGCRIHGNVEIAEA 433
W+ ++ IHG+ E A A
Sbjct: 491 SWTTMILAYGIHGHGEDALA 510
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 177/367 (48%), Gaps = 49/367 (13%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ L+ QM+ I PD F +++AC + +H ++ GF DV V +L
Sbjct: 104 ALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALAS 163
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+Y K G L +ARQ+FDRMP RD VSW +
Sbjct: 164 MY-------------------------------TKCGSLENARQVFDRMPKRDVVSWNAI 192
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI 274
+AGY+Q+ Q EA+ LF M IKP++ LVS + CA L LEQGK IH Y + I
Sbjct: 193 IAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI 252
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
D + GLV+ YAKCG +NTA ++FE +++ +WNA++ G +++ +L +F+R
Sbjct: 253 ESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNR 312
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMA 387
M IKP+ +T++ L C+H +++ +++ E V G +
Sbjct: 313 MQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG--------NALV 364
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA--AAEHVMKLKPED 445
++ + G + A ++ ++MP +V W+ ++ G HG+ A A +KP+
Sbjct: 365 NMYAKCGNVNSAYKLFERMPK-KNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDS 423
Query: 446 GGVYKVL 452
+ VL
Sbjct: 424 FAIVSVL 430
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
Query: 207 DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH 266
+AV W + GY ++ +A++L+ M I PD + +S + AC +L+ G+ +H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 267 RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
I D + T L Y KCG + A ++F+ ++++ +WNA++ G + +G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF-DEMESVYGVSKELKHYGC 385
+L FS M IKP+ T++ + C+H +++ +++ + S G+ ++
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS--GIESDVLVVNG 261
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ ++ + G + A ++ ++MP+ DV W+ ++GG
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPI-RDVASWNAIIGG 296
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 256/441 (58%), Gaps = 11/441 (2%)
Query: 61 LSYALSIFNNIPYP-STFSYNTIIRAHTLFSSPL---NAVVLFSQMRTVSIPPDFYSFPF 116
+SYA IF+ +F +N IIRA SP + + ++ +MR + PDF++FPF
Sbjct: 7 ISYANPIFHIRHLKLESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPF 66
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
LL + L Q H+Q+L G D FV SL+++Y L A +FDE + +D
Sbjct: 67 LLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKD 126
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM- 235
+ + N++++ Y KAG + HAR+LFD MP R+ +SW L+ GY + +EA+ LF M
Sbjct: 127 LPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 186
Query: 236 ----DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
++ + P+ + + LSAC RLG LEQGK +H YI+ + +D L T L+D YAKC
Sbjct: 187 PKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKC 246
Query: 292 GYINTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILG 349
G + A +F++ +K++ ++AM+ LAM+GL FS M + I P+ VT +G
Sbjct: 247 GSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVG 306
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L C H GL+++ + F M +G++ ++HYGCM DL GR+GLI+EA I MPM
Sbjct: 307 ILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME 366
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
DV +W LL G R+ G+++ E A + +++L P + G Y +L++VYA RW +V +IR
Sbjct: 367 PDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIR 426
Query: 470 RSLDAGKIKKNAGCSLIQLNG 490
++ IKK GCS +++ G
Sbjct: 427 HEMEVKGIKKVPGCSYVEVEG 447
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 243/397 (61%)
Query: 94 NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLM 153
+A++LF +M+ ++ PD +L AC + + S + IH +++ + D + ++L+
Sbjct: 206 DALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALV 265
Query: 154 HVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
+Y + A LF+++ +++V+ ++ GY K G + +AR +F++M +D V W
Sbjct: 266 TMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSA 325
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
+++GYA+SD +EA+ LF M L IKPD + ++S ++ACA LG L+Q K IH +++ N
Sbjct: 326 MISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNG 385
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
++ L++ YAKCG + A IF+ KN+ +W M+ AMHG +L +F
Sbjct: 386 FGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFH 445
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
+M + I+P+G+T +G L CSHAGLV+E RK+F M + + ++ + HYGCM DL GRA
Sbjct: 446 QMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRA 505
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
L+ EALE+++ MP+ +V +W L+ CR+HG +E+ E AA+ +++L P+ G + L+
Sbjct: 506 NLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLS 565
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++YA A RWEDV ++R+ + I K GCS +LN
Sbjct: 566 NIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNN 602
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 204/459 (44%), Gaps = 80/459 (17%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + + ++ + Q+HA L L T++L + +S + L
Sbjct: 25 TLFSALSSATSLTHLKQVHAQILRSKL------DRSTSLLVKLVI------SSCALSSSL 72
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YALS+FN IP P T N +R + P ++++ +MRT + D +SFP LL+A
Sbjct: 73 DYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKAL 132
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S++ S IH KLGF D FV L+ +Y +C
Sbjct: 133 SRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMY---------------------AAC- 170
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
G +A AR +FD+M RD V+W ++ GY QS +A+ LF M + +++P
Sbjct: 171 ---------GRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEP 221
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D + L + LSAC R G L GK IH +I N I VD L + LV YA CG ++ A+ +F
Sbjct: 222 DEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLF 281
Query: 302 ESSQEKNLFT-------------------------------WNAMLVGLAMHGLGRLSLV 330
E KNL W+AM+ G A + +L
Sbjct: 282 EKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALN 341
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR--KLFDEMESVYGVSKELKHYGCMAD 388
F+ M IKPD VT+L + C+H G +D+A+ LF + G L + +
Sbjct: 342 LFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKN---GFGGALPINNALIE 398
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ + G +E A + KMP +V W+ ++ +HG+
Sbjct: 399 MYAKCGSLERARRIFDKMPR-KNVISWTCMISAFAMHGD 436
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 44/323 (13%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A S+FN + ++ +I + SP A+ LF++M+++ I PD + ++ AC+
Sbjct: 308 ARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAH 367
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + A+ IH V K GF + + N+L+ +Y L A+ +FD++ ++V+S +
Sbjct: 368 LGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCM 427
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I + GD AG A++ F M D +I+P+
Sbjct: 428 ISAFAMHGD-----------------------AG--------SALRFFHQMEDENIEPNG 456
Query: 244 IALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
I V L AC+ G +E+G+ I + I + I +VD + + + A+E+ E
Sbjct: 457 ITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVE 516
Query: 303 SSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ N+ W +++ +HG L R++E DG + + +
Sbjct: 517 AMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVF-------LSNIYA 569
Query: 362 EARKLFDEMESVYGVSKELKHYG 384
+AR+ E V V K +KH G
Sbjct: 570 KARR----WEDVGQVRKLMKHKG 588
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 277/490 (56%), Gaps = 19/490 (3%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
N+ + +T KQ+ QI A +T L L P I ++ A L +A
Sbjct: 17 NYAEHFQT-KQLLQIQAQLITNPPLSLHPNLIAVKLIGACAA-----------NANLYHA 64
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP----PDFYSFPFLLRA 120
IF +P P+ FS+N II+AH + +A+ F+ R +S+P P+ Y + L++A
Sbjct: 65 QLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFN--RQLSLPSAPNPNEYIYTSLIKA 122
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + +H+ V+K G ++ + SL+ +Y F A ++FDE+ RDVVS
Sbjct: 123 CAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSW 182
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-I 239
NT++ GY GDL AR++FD+M RD +SW ++ GY Q+ + +AI++F M + +
Sbjct: 183 NTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGV 242
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD++ LVS LSACA +G L+ G+ I R++ ++ +L L+D YAKCG + A
Sbjct: 243 VPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARR 302
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF+ +E+++ +W+ M+ G HG + Y+S+M+E +KP+ VT +G L CSHAGL
Sbjct: 303 IFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGL 362
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ +LF M Y + ++ HYGC+ DLL RAG ++EA ++I MP+ +V VW LL
Sbjct: 363 VDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALL 422
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
GGCRIH + E A+H+++L E G Y +A A+ R +D + I K
Sbjct: 423 GGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGIIK 482
Query: 480 NAGCSLIQLN 489
+ GCS I+++
Sbjct: 483 DPGCSKIEVH 492
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 271/487 (55%), Gaps = 24/487 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+++C +++++ QIH H +T GL + YA + L YA +
Sbjct: 11 LEQCSSMREMKQIHGHAITHGLARFAFISSKLLAFYARSD--------------LRYAHT 56
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F++IP+P+ F YNTII A SP + + F QM ++ P+ S F L S
Sbjct: 57 LFSHIPFPNLFDYNTIITAF----SPHYSSLFFIQMLNAAVSPN--SRTFSLLLSKSSPS 110
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+HS +++ G + D +V+ SL+ Y R A+ LFD+ Y++V +L+ G
Sbjct: 111 LPFLHQLHSHIIRRGHVSDFYVITSLLAAYSNHGSTRAARRLFDQSPYKNVACWTSLVTG 170
Query: 187 YVKAGDLAHARQLFDRMPFRDA--VSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y G + AR LFD +P R+ VS+ +V+GY ++ E IQLF + D ++KP+N
Sbjct: 171 YCNNGLVNDARNLFDAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNS 230
Query: 245 ALVSALSACARLGELEQGKNIHRYIELN--QIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
L S LSACA +G E+GK IH Y++ N Q + L T L+DFY KCG + A +F
Sbjct: 231 LLASVLSACASVGAFEEGKWIHAYVDQNKSQCYYELELGTALIDFYTKCGCVEPAQRVFG 290
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ + K++ W+AM++GLA++ + +L F M + +P+ VT +G L C+H L E
Sbjct: 291 NMKTKDVAAWSAMVLGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGE 350
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
A KLF M YG+ ++HYGC+ D+L R+G IEEALE IK M + D +W LL GC
Sbjct: 351 ALKLFGYMSDKYGIVASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGSLLNGC 410
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+H N+E+ +++++L+P GG Y +L++VYA +WE V++ R+ + + +G
Sbjct: 411 FLHNNIELGHKVGKYLVELEPGHGGRYVLLSNVYATMGKWEAVLETRKFMKDRGVPAVSG 470
Query: 483 CSLIQLN 489
S I+++
Sbjct: 471 SSFIEIH 477
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 283/541 (52%), Gaps = 77/541 (14%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGL--------LFLSPCHILTTILYAITTFKPISSA 53
+++ +K C T + Q+HA + KGL FL+ C+ L+
Sbjct: 27 SISTLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSN-------------- 72
Query: 54 SSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYS 113
SY S+FN + PST +NT I+ ++ S V LF +M+ PD ++
Sbjct: 73 -------FSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFT 125
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY-------CV-------- 158
+P L++ACS++C H ++ G DVFV+ SL+ +Y C
Sbjct: 126 YPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMG 185
Query: 159 ----------------FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDR 202
F L +A++LFDE+ ++ VS N +I GYVK GDL AR++FD
Sbjct: 186 ERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDE 245
Query: 203 MPFRDAVSWGTLVAGYAQSDQC-------EEAIQ---------LFCNMMDLDIKPDNIAL 246
MP R+ VS+ T++ GYA+S EEA + +F + ++KPD +
Sbjct: 246 MPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIM 305
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVD-SFLSTGLVDFYAKCGYINTAIEIFESSQ 305
VS +SAC+++G LE K + Y+ + I V + + L+D AKCG ++ A ++FE
Sbjct: 306 VSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMP 365
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+++L ++ +M+ GL++HG G ++ FSRM+ + PD V L CS AGLVDE
Sbjct: 366 KRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCY 425
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F+ M++ Y + HY CM DLLGRAG ++EA E++K MP+ W LLG C++H
Sbjct: 426 YFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLH 485
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
++E+ E A+ + +L+P++ G Y +L+++YA A++W DV +R + I+K GCS
Sbjct: 486 CDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSW 545
Query: 486 I 486
I
Sbjct: 546 I 546
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 268/476 (56%), Gaps = 46/476 (9%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
+ QIHA + G+ +P + +++ + +F P+SYA IF+ I P
Sbjct: 55 KFRQIHAFSIRHGVPLTNP-DMGKYLIFTLLSF----------CSPMSYAHQIFSQIQNP 103
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
+ F++NT+IR + +P+ A+ L+ QM I PD +++PFLL+A ++L + +H
Sbjct: 104 NIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVH 163
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
S ++ GF VFV N+L+H+Y +C G
Sbjct: 164 SIAIRNGFESLVFVQNTLVHMY---------------------AAC----------GHAE 192
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
A +LF+ M R+ V+W +++ GYA + + EA+ LF M ++PD +VS LSACA
Sbjct: 193 SAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACA 252
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFESSQEKNLFTW 312
LG L G+ H Y + ++ +D L G L+D YAKCG I A ++F+ +EK++ +W
Sbjct: 253 ELGALALGRRAHVY--MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSW 310
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
+++VGLA++G G+ +L F + + P +T +G L CSH G+VDE F M+
Sbjct: 311 TSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKE 370
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
YG+ +++HYGCM DLLGRAGL+++A E I+ MPM + VW LLG C IHG++ + E
Sbjct: 371 EYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGE 430
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
A +++L+P+ G Y +L+++YA+ RW DV K+RR++ +KK G SL++L
Sbjct: 431 VARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVEL 486
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 273/520 (52%), Gaps = 47/520 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L IK+C T K + A + L C ++ + A T+FK L
Sbjct: 775 NLKKIIKQCSTPKLLESALAAMIKTSLN--QDCRLMNQFITACTSFKR-----------L 821
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A+S + P+ F YN + + S P+ ++ L+ +M S+ P Y++ L++A
Sbjct: 822 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 881
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV--- 178
S + +++ + + K GF V + +L+ Y R+R+A+++FDE+ RD +
Sbjct: 882 S--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWT 939
Query: 179 ----------------------------SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
+ N LI+GY+ G+L A LF++MP +D +S
Sbjct: 940 TMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIIS 999
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W T++ GY+Q+ + EAI +F MM+ I PD + + + +SACA LG LE GK +H Y
Sbjct: 1000 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 1059
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
N +D ++ + LVD Y+KCG + A+ +F + +KNLF WN+++ GLA HG + +L
Sbjct: 1060 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALK 1119
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F++M +KP+ VT + C+HAGLVDE R+++ M Y + ++HYG M L
Sbjct: 1120 MFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 1179
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
+AGLI EALE+I M + +W LL GCRIH N+ IAE A +M L+P + G Y
Sbjct: 1180 SKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF 1239
Query: 451 VLADVYANADRWEDVVKIR-RSLDAGKIKKNAGCSLIQLN 489
+L +YA +RW DV +IR R + G K G S I+++
Sbjct: 1240 LLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 1279
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 277/513 (53%), Gaps = 44/513 (8%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CK++ QIHA+ L GL S I +L+ + +D L YA +F
Sbjct: 15 CKSLTTFKQIHANVLKLGLE--SDPFIAGKLLH---------HCAISLSDSLDYACRLFR 63
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSI-PPDFYSFPFLLRACSQLCSHS 128
P P F +NT+IR P ++++ F +MR S PPD +SF F+++A + L S
Sbjct: 64 YTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVR 123
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVY-------------------------------C 157
+ +H Q L G +FV +L+ +Y C
Sbjct: 124 VGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACC 183
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
++ +ELFD + R+++S N ++ GY KAG+L AR++F MP +D VSW T++ G
Sbjct: 184 RGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVG 243
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
+A + EEA F + ++P+ +L LSACA+ G LE GK +H +IE + +
Sbjct: 244 FAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWI 303
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
++ L+D Y+KCG + A +FE E+N+ +W +M+ LAMHG G ++ F +M
Sbjct: 304 VSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKME 363
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
E+ I+PD + + L CSHAGLV++ + FD+M+ +Y + ++HYGCM DL GRAG +
Sbjct: 364 ESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQL 423
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
++A E + +MP+ +W LLG C +HG+V++AE E + +L P + + +L++ Y
Sbjct: 424 QKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAY 483
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
A A +W+D +RRS+ +I K G S+I+++
Sbjct: 484 AVAGKWKDAASVRRSMTEQRITKTPGWSMIEVD 516
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 281/513 (54%), Gaps = 43/513 (8%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+CK+++ + QI A L C L + Y + + K + + D L YA +F
Sbjct: 14 KCKSLRTVKQIQA-------LIFKTC--LNS--YPLVSGKLLLHCAVTLPDSLHYARRLF 62
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQLCSH 127
+I P F YNT+IR + +P NA+ LF +MR S+ PD +SF FLL+A + +
Sbjct: 63 LDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRAL 122
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYC-----VFHR--------------------- 161
+ +H + G +FV +L+ +Y VF R
Sbjct: 123 TNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAAC 182
Query: 162 -----LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
++DA+++F + R++ S N ++ GY KAG+L AR++F +MP +D VSW T++
Sbjct: 183 FRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIV 242
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
G+A + +A F + ++P+ ++L LSACA+ G E G+ +H ++E +
Sbjct: 243 GFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQ 302
Query: 277 DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
++ L+D Y+KCG ++ A +F++ ++ +W AM+ G+AMHG G ++ F+ M
Sbjct: 303 IISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEME 362
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
E+ IKPD +T + L CSHAGLVD F M + YG+ ++HYGCM DL GRAG +
Sbjct: 363 ESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKL 422
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
++A + + +MP+ + VW LLG C IHGN+ +A + +L PE+ G + +L+++Y
Sbjct: 423 QQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIY 482
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
A A +W+DV +RRS+ ++KK G S+I++N
Sbjct: 483 AVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVN 515
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 276/489 (56%), Gaps = 16/489 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ +C + Q+ Q HA L GL H +L + F S S LS+A
Sbjct: 11 LLHKCINMNQLKQAHAQVLKSGL------HNSNFVLSRLLNFCAESRNGS-----LSHAF 59
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F +I +P+ +NT+I+A L LNA+ +FS + I PD Y+ P++L+A +++
Sbjct: 60 KLFQHIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMT 119
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ L ++IH+ +KLG + FV NSL+ +Y F +R A+++FDE+ VS +I
Sbjct: 120 NIHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIY 179
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY GD+ AR+LFD +D WG +++GY Q++ +E + +F M +++PD
Sbjct: 180 GYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAI 239
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ LSACA +G L+ G IHRY+ + + +STGL+D YAKCG+++ A +F
Sbjct: 240 IVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMS 299
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+++ WNAM+ G+AM G G ++ F M +A IKPD +T + CS++G+VDE +
Sbjct: 300 QRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIR 359
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG----DVFVWSGLLGG 421
+++ M +V+ + + +HYGC+ DLL R G EEA +I+++P + W L
Sbjct: 360 IWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSA 419
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C HG + AE AAE + +L+ G Y +L+++YA + ED ++R + ++K
Sbjct: 420 CCKHGQTQQAEVAAERLFQLE-RHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVP 478
Query: 482 GCSLIQLNG 490
GCS I++NG
Sbjct: 479 GCSSIKVNG 487
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 278/521 (53%), Gaps = 52/521 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I CKT+K + IHA L + + S ++ +L + F TD YA
Sbjct: 7 HIIHNCKTLKSLKSIHARLLIESSV-ASSEFVINKLLRLYSRFG--------ATD---YA 54
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ I P+ + + ++I + A LF QMR I ++ +L+A ++L
Sbjct: 55 HKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARL 114
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
Q ++ D+ N ++ Y R+ A++ FD + R+VVS ++I
Sbjct: 115 TRFKGGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMI 174
Query: 185 DGYVKAGDLAHA--------------------------------RQLFDRMPFRDAVSWG 212
GYVKAGD+A A R LFD+MP ++ V+W
Sbjct: 175 CGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWS 234
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI-HRYIE- 270
T++ GYA++ Q +A++LF + DIKPD ++ +SAC++LG ++ ++I H Y+
Sbjct: 235 TMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGP 294
Query: 271 --LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
L+ +RV T L+D YAKCG I A+++FE + K+L ++ M+ LA HGLGR +
Sbjct: 295 SLLSDLRV----FTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDA 350
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
+ F +M A IKPD VT LG L C+H GLVDE RK F +M +G+ KHY C+ D
Sbjct: 351 IFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVD 410
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
LLGR G +EEA +I+ MP+ VW LL CR+H NV++AE AA + K++P++ G
Sbjct: 411 LLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGN 470
Query: 449 YKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
Y +L+++YA A RW V K+R + +++KN G S I+L+
Sbjct: 471 YILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELS 511
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 237/424 (55%), Gaps = 31/424 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ +N I+ A+ + V +F M V + D + ++ AC ++
Sbjct: 177 VFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGD 236
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L + + V + G L R+ L+D
Sbjct: 237 AKLGKWVAGHVDEEG-------------------------------LARNPKLVTALMDM 265
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G++ AR+LFD M RD V+W +++GY Q+DQC EA+ LF M ++P+++ +
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS LSACA LG LE GK +H Y+ ++ + + L T LVDFYAKCG I+ A+E FES
Sbjct: 326 VSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV 385
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
KN +TW A++ G+A +G GR +L FS M EA I+P VT +G L+ CSH+ LV+E R+
Sbjct: 386 KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRH 445
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
FD M YG+ ++HYGCM DLLGRAGL++EA + I+ MP+ + +W LL C +H
Sbjct: 446 FDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHR 505
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NV I E A + ++ L P G Y +L+++YA+A +W+D +R+ + I+K GCSLI
Sbjct: 506 NVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLI 565
Query: 487 QLNG 490
+L+G
Sbjct: 566 ELDG 569
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 193/388 (49%), Gaps = 53/388 (13%)
Query: 51 SSASSPTTDPLSYALSIFNNIPYP--STFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVS 106
++A+SPT P YA+S+F P P ST YN ++RA P +A+ LF +M +
Sbjct: 58 AAAASPTLLP--YAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASA 115
Query: 107 IPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
P D ++ L++CS++C+ + + + + +K G + D FVL+SL+H+Y
Sbjct: 116 CPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMY---------- 165
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
SC GD+A AR +FD V W +VA Y ++ E
Sbjct: 166 -----------ASC----------GDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWME 204
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
+++F M+++ + D + LVS ++AC R+G+ + GK + +++ + + L T L+D
Sbjct: 205 VVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMD 264
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAKCG I A +F+ Q +++ W+AM+ G R +L FS M AR++P+ VT
Sbjct: 265 MYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVT 324
Query: 347 ILGALVGCSHAGLVDEA-------RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
++ L C+ G ++ R+ + ++ G + + D + G I++A
Sbjct: 325 MVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTA--------LVDFYAKCGCIDDA 376
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+E + MP+ + + W+ L+ G +G
Sbjct: 377 VEAFESMPV-KNSWTWTALIKGMATNGR 403
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 271/490 (55%), Gaps = 54/490 (11%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
F+ +K HQ+HAH L +GL P ++ + + A ASS D +
Sbjct: 78 QFLTGLNMLKLGHQVHAHMLLRGL---QPTALVGSKMVAFY-------ASSGDIDS---S 124
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+FN I D+++FPF+L++ +L
Sbjct: 125 VSVFNGIG-------------------------------------DYFTFPFVLKSSVEL 147
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S + + +H +L++G D++V SL+ +Y + DA ++FD + RDV S N L+
Sbjct: 148 LSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALL 207
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD--IKPD 242
GY K+G + A +F+RMP+R+ VSW T+++GY+QS ++A+ LF M+ D ++P+
Sbjct: 208 AGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPN 267
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ ++S L ACA+L LE+G+ IH + ++ + L YAKCG + A F+
Sbjct: 268 WVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFD 327
Query: 303 --SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
+ EKNL WN M+ A +G G ++ F MI+A I+PD +T G L GCSH+GLV
Sbjct: 328 KLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLV 387
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D K F+ M + Y ++ ++HY C+ADLLGRAG + EA +++ +MPM +W LL
Sbjct: 388 DVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLA 447
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR H N+E+AE AA + L+PE+ G Y +L+++YA A RW++V K+R + + KK+
Sbjct: 448 ACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKS 507
Query: 481 AGCSLIQLNG 490
GCS I++NG
Sbjct: 508 PGCSWIEING 517
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 274/493 (55%), Gaps = 23/493 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C T + + + AH L L ++ T I++ + +A
Sbjct: 17 LRACATFRDL--LRAHGLAVRLCLSQSSYVATQIVHVCNGHGRAA-----------HAAR 63
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPP--------DFYSFPFL 117
+F ++P P+ +N +I+A+ +AV ++ +M R + P D +++PFL
Sbjct: 64 VFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFL 123
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+AC L + L + +H+ V + G V NSL+ +Y L A+++FD + +D
Sbjct: 124 LKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDA 183
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VS NTLI + + G + AR+LF MP + VSW LV+GY A+++F M
Sbjct: 184 VSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQME 243
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+PD++++V+ L ACA+LG LE G+ I+ Y + + ++ L++ YAKCG I A
Sbjct: 244 GFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEA 303
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSH 356
+++F EK++ +W+ + GLA HG R ++ F M E R+ P+G+T +G L CSH
Sbjct: 304 LQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSH 363
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGL+DE + FD M+ YGV ++HYGC+ DLLGR+G I+ AL+ I MP+ D +W
Sbjct: 364 AGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWG 423
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CR H +V+ A AAE +++L+PED G +LA+VYA A RW +V R+ + +
Sbjct: 424 SLLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRS 483
Query: 477 IKKNAGCSLIQLN 489
+K GCS+I+++
Sbjct: 484 TRKTPGCSMIEVD 496
>gi|356570151|ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 465
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 274/488 (56%), Gaps = 47/488 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL +C T+ Q+ Q+HA + ++ P A F S A SP D L
Sbjct: 20 TLALISDKCTTLDQLKQVHAQMIVSAVVATDP-------FAASRLF--FSCALSPFGD-L 69
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
S A IF++ P P++F +NT+IRA T +P +A+ L+ MR ++ P ++FPFLL+AC
Sbjct: 70 SLAFRIFHSTPRPNSFMWNTLIRAQT--HAP-HALSLYVAMRRSNVLPGKHTFPFLLKAC 126
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+++ S + +Q +H V+K G D V+++L+ Y V
Sbjct: 127 ARVRSFTASQQVHVHVIKFGLDFDSHVVDALVRCYSV----------------------- 163
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+G ARQ+FD P + + W T+V GYAQ+ EA++LF +M+ +P
Sbjct: 164 --------SGHCVSARQVFDETPEKISSLWTTMVCGYAQNFCSNEALRLFEDMVGEGFEP 215
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIE 299
L S LSACAR G LE G+ IH ++++ + + L T LV YAK G I A
Sbjct: 216 GGATLASVLSACARSGCLELGERIHEFMKVKGVGLGEGVILGTALVYMYAKNGEIAMARR 275
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAG 358
+F+ E+N+ TWNAM+ GL +G +L F +M E + P+GVT +G L C HAG
Sbjct: 276 LFDEMPERNVVTWNAMICGLGAYGYVDDALGLFEKMKKEGVVVPNGVTFVGVLSACCHAG 335
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+D R++F M+SVYG+ +++HYGC+ DLLGR G + EA+E++K MP DV + L
Sbjct: 336 LIDVGREIFRSMKSVYGIEPKIEHYGCLVDLLGRGGWLLEAVELVKGMPWKADVVILGTL 395
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L RI GN E+AE + ++ L+P++ GV+ L+++YA A +W++V+++R+++ ++K
Sbjct: 396 LAASRISGNTEVAERVVKDILALEPQNHGVHVALSNMYAEAGQWQEVLRLRKTMKEERLK 455
Query: 479 KNAGCSLI 486
K G SL+
Sbjct: 456 KAPGWSLV 463
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 254/431 (58%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS A + P S+ ++I A++ AV F M + I PD + +L A
Sbjct: 128 LSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSA 187
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVS 179
CSQL L ++H V + G ++ +L+ +Y A+E+FD + R S
Sbjct: 188 CSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQS 247
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N +IDGY K G + AR LFD+M RD +++ +++ GY S Q EA+ LF NM D+
Sbjct: 248 WNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDL 307
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ DN +VS LSACA LG L QG+ +H IEL + D ++ T L+D Y KCG +N A
Sbjct: 308 RVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATI 367
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ ++++ W AM+ GLA +G+G+ L YF +M +P+ V+ + L CSH+ L
Sbjct: 368 VFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCL 427
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
++E R FDEM +Y + +++HYGCM DLLGR+GL++EA++++K MPM + +W+ +L
Sbjct: 428 LNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASIL 487
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H +++A+ AAEH++K++P++ VY L ++ ++ +WED KIR ++ ++KK
Sbjct: 488 SACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKK 547
Query: 480 NAGCSLIQLNG 490
AG S + + G
Sbjct: 548 TAGYSSVTVAG 558
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 198/406 (48%), Gaps = 43/406 (10%)
Query: 75 STFSYNTIIRA----HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
STF ++T +RA T P VLF +MR ++ PD ++F FL + S +L
Sbjct: 4 STFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALL 63
Query: 131 QT-IHSQVLKLGFICDV-FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
T +H+ L+ FV NSL+H+Y D + FDEI +D VS +I G
Sbjct: 64 CTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLA 123
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
K G L+ AR L + P RD +SW +L+A Y+++D+ +EA+ F NM+ I PD++ ++
Sbjct: 124 KMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIG 183
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC----------------- 291
LSAC++L +LE G ++H ++ + + L L+D YAKC
Sbjct: 184 VLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGR 243
Query: 292 ---------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
G+++ A +F+ + +++ T+N+M+ G G R +L+ F M
Sbjct: 244 RPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMR 303
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
++ D T++ L C+ G + + R L +E + V ++ + D+ + G +
Sbjct: 304 RHDLRVDNFTVVSLLSACASLGALPQGRALHACIE-LRLVETDIYIGTALLDMYMKCGRV 362
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
EA + ++M DV W+ ++ G +G + +A E+ +++
Sbjct: 363 NEATIVFQRMG-KRDVHAWTAMIAGLAFNG---MGKAGLEYFYQMR 404
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 190/424 (44%), Gaps = 33/424 (7%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
N+I S+N+I+ + AV QM P SF LL +
Sbjct: 892 LNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDW 951
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L IH V KLGF C S +HV TLID Y
Sbjct: 952 QLGVQIHGIVHKLGFSC------SSVHVQ------------------------TTLIDMY 981
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
K H+ +F+ +P +L+ + + A+++ M+ + PD++
Sbjct: 982 GKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFDAALEILHCMIVEGVTPDDVTFS 1041
Query: 248 SALSACARLGE--LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+ + A + L + +H + +D + + L+ YA G ++++ IFE
Sbjct: 1042 ATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLL 1101
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+ N+ + A++ A +G G ++ F +M+ + +KPD VT L A+ GC AG+ +E R
Sbjct: 1102 DPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRL 1161
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+ + M + + + +H+ CM +LL R G ++EA+EM+++ P+ WS LL C+ H
Sbjct: 1162 VIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAH 1221
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G + + AA ++ + +D +++ + + E ++I+ + ++KK +G SL
Sbjct: 1222 GENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKK-SGHSL 1280
Query: 486 IQLN 489
I+++
Sbjct: 1281 IEVS 1284
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 32/285 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
ALS+F +P +T N ++R + F MR + + S+ + ++ C Q
Sbjct: 785 ALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQ 844
Query: 124 LCSH-SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ +H VLK G+I L+ N+
Sbjct: 845 NGEWLEQGRQLHGVVLKAGWIPSNIFLS------------------------------NS 874
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y GD + + + D +SW ++++ YA +EA+ M+ P
Sbjct: 875 LVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPS 934
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF-LSTGLVDFYAKCGYINTAIEIF 301
+ VS L+ + G+ + G IH + S + T L+D Y KC + ++ IF
Sbjct: 935 VRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIF 994
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
L N+++ + +L MI + PD VT
Sbjct: 995 NEIPSIALECCNSLITSSLGCNMFDAALEILHCMIVEGVTPDDVT 1039
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 119/291 (40%), Gaps = 43/291 (14%)
Query: 48 KPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSI 107
+PI S+ +P + S +++ + S N +I A ++ M I
Sbjct: 678 RPIPSSPAPFSLRSSVTMAVRD------VASLNRMITGFIRDGLADRARAVYRWMVASGI 731
Query: 108 PPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
++F +L CS A +H +VL LG C+ FV ++L++ Y A
Sbjct: 732 RETPHTFSTILGVCSTY----EALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALS 787
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
LF E+ ++ CN ++ G G+L EE
Sbjct: 788 LFRELPLQNTAMCNVVLRGL---GNLKLT----------------------------EEL 816
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGE-LEQGKNIHRYI-ELNQIRVDSFLSTGLV 285
I F +M ++ + ++ A+ C + GE LEQG+ +H + + I + FLS LV
Sbjct: 817 ICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLV 876
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
D Y+ G ++ +++ +WN++L A G + ++ Y +M+
Sbjct: 877 DLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQML 927
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 230/358 (64%), Gaps = 1/358 (0%)
Query: 134 HSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
H++++ +C DV N++++ Y + ++ +A+ LFDE+ R++VS N+++ G+VK G+
Sbjct: 279 HARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGN 338
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ A LF MP RD VSW +++A YAQ + EA+ LF M + +KP +VS LSA
Sbjct: 339 VEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSA 398
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA LG L++G ++H YI N+I V+S + T LVD YAKCG I+ A ++F + + K++ W
Sbjct: 399 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 458
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
N ++ G+A+HG + + F M EA ++P+ +T + L CSHAG+VDE +KL D M S
Sbjct: 459 NTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSS 518
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
YG+ +++HYGC+ DLL RAG +EEA+E+I MPM + LLGGCRIHGN E+ E
Sbjct: 519 SYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGE 578
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ ++ L+P G Y +L+++YA A +W+D K+R + I K G S+I+L G
Sbjct: 579 MVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKG 636
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 206/430 (47%), Gaps = 67/430 (15%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CKT++ + Q+HA +T SP + SA SP L+YA +IF+
Sbjct: 106 CKTLRHLKQVHAQIITH---HNSPFQLSALA---------SLSALSPFPTFLAYAKTIFH 153
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
++ P YN++IRA + +PL A+ L+ M + PD ++PF+++AC++
Sbjct: 154 HLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWF 213
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+H+ V+K GF CD ++++SL+H+Y L A++LF+ RDVVS N +IDGYVK
Sbjct: 214 GLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVK 273
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
++ HAR +FDRM RD +SW T++ GYA + +EA +LF M
Sbjct: 274 HVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEM--------------- 318
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
E N + +S L+ + KCG + A +F +++
Sbjct: 319 -------------------PERNLVSWNSMLAG-----FVKCGNVEDAFGLFSEMPCRDV 354
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD- 368
+WN+ML A G +L F +M +KP T++ L C+H G +D+ L
Sbjct: 355 VSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTY 414
Query: 369 ------EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
E+ S+ G + + D+ + G I A ++ M DV W+ ++ G
Sbjct: 415 INDNRIEVNSIVGTA--------LVDMYAKCGKISLATQVFNAME-SKDVLAWNTIIAGM 465
Query: 423 RIHGNVEIAE 432
IHGNV+ A+
Sbjct: 466 AIHGNVKEAQ 475
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 275/519 (52%), Gaps = 47/519 (9%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L IK+C T K + A + C+++ + A ++F + L
Sbjct: 783 LKQIIKQCSTPKLLESALAAMIKTSQT--QNCYLMNQFITACSSF-----------NRLD 829
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
A+S + P+ F YN +I+ S P+ ++ + +M S+ P Y++ L++A +
Sbjct: 830 LAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRSLEFYVRMLRDSVSPSSYTYSSLVQASA 889
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ +++ + + K GF V + +L+ Y R+R+A+++FDE+ RD V+ T
Sbjct: 890 --FASGFGESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTT 947
Query: 183 -------------------------------LIDGYVKAGDLAHARQLFDRMPFRDAVSW 211
LIDGY + G+L A LF++MP +D +SW
Sbjct: 948 MVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISW 1007
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
T++ GY+++ + EAI +F MM+ I PD + + + +SACA LG LE GK +H Y
Sbjct: 1008 TTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQ 1067
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
N +D ++ + LVD Y+KCG + A+ +F + +KNLF WN+++ GLA HG + +L
Sbjct: 1068 NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKM 1127
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F++M +KP+ VT + C+HAGLV+E R+++ M Y + ++HYGCM L
Sbjct: 1128 FAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFS 1187
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
+AGLI EALE+I M + +W LL GCRIH N+EIAE A +M L+P + G Y +
Sbjct: 1188 KAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFL 1247
Query: 452 LADVYANADRWEDVVKIR-RSLDAGKIKKNAGCSLIQLN 489
L +YA +RW DV +IR R + G K G S I+++
Sbjct: 1248 LVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 1286
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 159/371 (42%), Gaps = 56/371 (15%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
P L + Q + L ++ + ++K + +++N + F+RL A ++
Sbjct: 780 LPILKQIIKQCSTPKLLESALAAMIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQ 839
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS----------------------- 210
+V N LI G+V + + + RM RD+VS
Sbjct: 840 KPNVFVYNALIKGFVTCSHPIRSLEFYVRM-LRDSVSPSSYTYSSLVQASAFASGFGESL 898
Query: 211 ----WG-----------TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
W TL+ Y+ S + EA ++F M + D++ + +SA +
Sbjct: 899 QAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPER----DDVTWTTMVSAYRQ 954
Query: 256 LGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
+ +++ ++ ++ E N+ + L+D Y + G + A +F K++ +W
Sbjct: 955 VLDMDSANSLANQMPEKNEATWNC-----LIDGYTRLGNLELAESLFNQMPVKDIISWTT 1009
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
M+ G + + R ++ F +M+E I PD VT+ + C+H G+++ +++ M +V
Sbjct: 1010 MINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV--HMYTVQ 1067
Query: 375 -GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
G ++ + D+ + G +E AL + +P ++F W+ ++ G HG A+
Sbjct: 1068 NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHG---FAQE 1123
Query: 434 AAEHVMKLKPE 444
A + K++ E
Sbjct: 1124 ALKMFAKMEME 1134
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 274/517 (52%), Gaps = 44/517 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CK ++ + QIH F+ G+ T Y T K I + +D L YA
Sbjct: 2 SLLNSCKNLRALTQIHGLFIKYGV---------DTDSY--FTGKLILHCAISISDALPYA 50
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQ 123
+ P P F +NT++R ++ P N+V +F +M R + PD +SF F+++A
Sbjct: 51 RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 110
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY----CV-FHR----------------- 161
S +H Q LK G +FV +L+ +Y CV F R
Sbjct: 111 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 170
Query: 162 ---------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
+ A+E+FD++L R+ S N ++ GY+KAG+L A+++F MP RD VSW
Sbjct: 171 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 230
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
T++ G A + E+ F + + P+ ++L LSAC++ G E GK +H ++E
Sbjct: 231 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 290
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN-LFTWNAMLVGLAMHGLGRLSLVY 331
++ L+D Y++CG + A +FE QEK + +W +M+ GLAMHG G ++
Sbjct: 291 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 350
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F+ M + PDG++ + L CSHAGL++E F EM+ VY + E++HYGCM DL G
Sbjct: 351 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 410
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
R+G +++A + I +MP+ VW LLG C HGN+E+AE + + +L P + G +
Sbjct: 411 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 470
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
L++ YA A +W+DV IR+S+ +IKK SL+++
Sbjct: 471 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 507
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 255/429 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +A +F+ + S+N++I + +V+F +MR + D + ++ A
Sbjct: 846 LGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLA 905
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + + + DV++ N+L+ +Y + A+ +FD + R++VS
Sbjct: 906 CTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSW 965
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GY KAG+L AR+LFD MP RD +SW ++++ Y+Q+ Q +A++LF MM +K
Sbjct: 966 NAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVK 1025
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I + S LSACA +G L+ G+ +H YI + D ++ L+D Y KCG + + +
Sbjct: 1026 PDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSV 1085
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +++ +W +++ GLA++G +L FS M+ ++P T +G L+ C+HAG+V
Sbjct: 1086 FEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVV 1145
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F+ ME VYG++ E+KHYGC+ DLL R+G + A E IK+MPM DV VW LL
Sbjct: 1146 DKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLS 1205
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
++HGN+ +AE A + +++ P + G Y + ++ YA ++RWEDV+K+RR ++ + K
Sbjct: 1206 ASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKP 1265
Query: 481 AGCSLIQLN 489
+ S +++N
Sbjct: 1266 SASSSVEIN 1274
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 200/421 (47%), Gaps = 81/421 (19%)
Query: 58 TDPLS-------YALS---------IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ 101
TDP+S YALS +F IP P+ +N +IR + + P+ A+ ++
Sbjct: 727 TDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNL 786
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR 161
M + ++ + ++PFLL+AC+++ + S T+H++VLKLGF D+FV N+L+H Y F
Sbjct: 787 MYSQALFGNNLTYPFLLKACARISNVS-CTTVHARVLKLGFDSDLFVSNALIHGYAGFCE 845
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
L A+++FDE+ RD+VS N+LI GY +
Sbjct: 846 LGFARKVFDEMSERDLVSWNSLI-------------------------------CGYGRC 874
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
+ E + +F M D+K D + +V + AC LGE + YIE N++ VD +L
Sbjct: 875 RRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLG 934
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG-----------------L 324
L+D Y + ++ A +F+ +++N+ +WNAM++G G +
Sbjct: 935 NTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVI 994
Query: 325 GRLSLV--------------YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
S++ F M+ ++KPD +T+ L C+H G +D + + +
Sbjct: 995 SWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYI 1054
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
Y V+ ++ + D+ + G +E+ L + ++M D W+ ++ G ++G+ +
Sbjct: 1055 RK-YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMG-KRDSVSWTSVIAGLAVNGSADS 1112
Query: 431 A 431
A
Sbjct: 1113 A 1113
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 45/324 (13%)
Query: 168 LFDEILYRDVVSCNTLIDGY-VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
+ E+L D +S L+ Y + ++ A +LF ++P W ++ G++Q++Q E
Sbjct: 720 MIKELLPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIE 779
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
AI+ + M + +N+ L ACAR+ + R ++L D F+S L+
Sbjct: 780 AIRNYNLMYSQALFGNNLTYPFLLKACARISNVSCTTVHARVLKLG-FDSDLFVSNALIH 838
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YA + A ++F+ E++L +WN+++ G LV F M A +K D VT
Sbjct: 839 GYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVT 898
Query: 347 ILGALVGCSHAG-----------------------------------LVDEARKLFDEME 371
++ ++ C+ G +VD AR++FD M
Sbjct: 899 MVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMR 958
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
VS + M G+AG + A ++ MP DV W+ ++ G A
Sbjct: 959 DRNMVS-----WNAMIMGYGKAGNLVAARKLFDDMPH-RDVISWTSMISSYSQAGQFGKA 1012
Query: 432 EAAAEHVM--KLKPEDGGVYKVLA 453
+ +M K+KP++ V VL+
Sbjct: 1013 VRLFQEMMVTKVKPDEITVASVLS 1036
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 168/431 (38%), Positives = 252/431 (58%), Gaps = 11/431 (2%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLC 125
+F +P S+N +I + AV ++ +M T S P+ + L AC+ L
Sbjct: 165 VFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLR 224
Query: 126 SHSLAQTIHSQV---LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ L + IH + L L I + N+L+ +YC + A+E+FD + ++V +
Sbjct: 225 NLELGKEIHDYIASELDLTTI----MGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTS 280
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GYV G L AR LF+R P RD V W ++ GY Q ++ EE I LF M +KPD
Sbjct: 281 MVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPD 340
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+V+ L+ CA+ G LEQGK IH YI+ N+I+VD+ + T L++ YAKCG I + EIF
Sbjct: 341 KFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFN 400
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+EK+ +W +++ GLAM+G +L F M +KPD +T + L CSHAGLV+E
Sbjct: 401 GLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEE 460
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD---VFVWSGLL 419
RKLF M S+Y + L+HYGC DLLGRAGL++EA E++KK+P + V ++ LL
Sbjct: 461 GRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALL 520
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR +GN+++ E A + K+K D ++ +LA +YA+ADRWEDV K+R + IKK
Sbjct: 521 SACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKK 580
Query: 480 NAGCSLIQLNG 490
G S I+++G
Sbjct: 581 VPGYSAIEVDG 591
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 214/492 (43%), Gaps = 91/492 (18%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
T + +K CK++ Q+ QI AH GL L + F SS
Sbjct: 10 TYISLLKSCKSMSQLKQIQAHIFCVGL------QQDRDTLNKLMAFSMDSSLGD-----F 58
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+YA IFN I PS F YN +I+A S +A+ LF Q+R + PD Y++P++L+
Sbjct: 59 NYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGI 118
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + +H+ V+K G D +V NS M +Y + ++F+E+ RD VS N
Sbjct: 119 GCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWN 178
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+I GYV+ A ++ RM + +S++ KP
Sbjct: 179 IMISGYVRCKRFEEAVDVYRRM--------------WTESNE----------------KP 208
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ +VS LSACA L LE GK IH YI +++ + + + L+D Y KCG+++ A EIF
Sbjct: 209 NEATVVSTLSACAVLRNLELGKEIHDYIA-SELDLTTIMGNALLDMYCKCGHVSVAREIF 267
Query: 302 ES----------------------SQEKNLFT---------WNAMLVGLAMHGLGRLSLV 330
++ Q +NLF W AM+ G ++
Sbjct: 268 DAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIA 327
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHY 383
F M +KPD ++ L GC+ +G +++ + + + ++++V G +
Sbjct: 328 LFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTA------ 381
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA--AAEHVMKL 441
+ ++ + G IE++ E+ + D W+ ++ G ++G A A L
Sbjct: 382 --LIEMYAKCGCIEKSFEIFNGLKE-KDTTSWTSIICGLAMNGKPSEALELFKAMQTCGL 438
Query: 442 KPEDGGVYKVLA 453
KP+D VL+
Sbjct: 439 KPDDITFVAVLS 450
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+ IFN + T S+ +II + P A+ LF M+T + PD +F +L ACS
Sbjct: 395 SFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSH 454
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 258/437 (59%), Gaps = 4/437 (0%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
T + YA + + P + +N +IR + +P ++ ++ QM + PD ++PF
Sbjct: 800 VTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPF 859
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
L+++ S+L + L ++H V+K G D+F+ N+L+H+Y F A++LFDE+ +++
Sbjct: 860 LMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKN 919
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
+V+ N+++D Y K+GD+ AR +FD M RD V+W +++ GY + + +A+++F MM
Sbjct: 920 LVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMR 979
Query: 237 L-DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ K + + +VS + ACA LG L +GK +HRYI + + L T L+D YAKCG I
Sbjct: 980 MGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIG 1039
Query: 296 TAIEIF--ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
A +F S +E + WNA++ GLA HG R SL F +M E++I PD +T L L
Sbjct: 1040 DAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAA 1099
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSH GLV EA F ++ G + +HY CM D+L RAGL+++A + I +MP+
Sbjct: 1100 CSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGS 1158
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+ LL GC HGN+E+AE + +++L+P + G Y LA+VYA ++ +R +++
Sbjct: 1159 MLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAME 1218
Query: 474 AGKIKKNAGCSLIQLNG 490
+KK AG S++ L+G
Sbjct: 1219 KKGVKKIAGHSILDLDG 1235
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 113/289 (39%), Gaps = 12/289 (4%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
I N P YN II ++ L +M+ + P ++ + ++ C
Sbjct: 465 IVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCD 524
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI----LYRDVVSCNT 182
A + ++ GF + L+ C R DA + D++ +V+
Sbjct: 525 FVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTA 584
Query: 183 LIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
IDG +K + +LF + D +++ L+ ++ + EA LF M+
Sbjct: 585 AIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKG 644
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KP S + + GE+++G + + ++ D T L+ G + AI
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Query: 299 EIFESSQEK----NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+ + K N T+ A++ GL G +LVYF M E ++PD
Sbjct: 705 FRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPD 753
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 11/220 (5%)
Query: 41 LYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
+YA I S + + + + N+ + S ++ IR A +F
Sbjct: 106 MYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFD 165
Query: 101 QMRTVSI-PPDFYSFPFLLRACSQLCSHS--LAQTIHSQVLKLGFICDVFVLNSLMHVYC 157
++R + + P+ Y++ LL A S+ S S L + ++ GF D F L ++ VYC
Sbjct: 166 RVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYC 225
Query: 158 VFHRLRDAQELFDEILYR---DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA----VS 210
+ A +F+EIL R D L+ + K G + A +L + + RD +
Sbjct: 226 NTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKT 285
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
+ L+ G+ + + ++A QLF M + + D IAL L
Sbjct: 286 YCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD-IALYDVL 324
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 274/517 (52%), Gaps = 44/517 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CK ++ + QIH F+ G+ T Y T K I + +D L YA
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGV---------DTDSY--FTGKLILHCAISISDALPYA 58
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQ 123
+ P P F +NT++R ++ P N+V +F +M R + PD +SF F+++A
Sbjct: 59 RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 118
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY----CV-FHR----------------- 161
S +H Q LK G +FV +L+ +Y CV F R
Sbjct: 119 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 162 ---------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
+ A+E+FD++L R+ S N ++ GY+KAG+L A+++F MP RD VSW
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 238
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
T++ G A + E+ F + + P+ ++L LSAC++ G E GK +H ++E
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN-LFTWNAMLVGLAMHGLGRLSLVY 331
++ L+D Y++CG + A +FE QEK + +W +M+ GLAMHG G ++
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F+ M + PDG++ + L CSHAGL++E F EM+ VY + E++HYGCM DL G
Sbjct: 359 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 418
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
R+G +++A + I +MP+ VW LLG C HGN+E+AE + + +L P + G +
Sbjct: 419 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 478
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
L++ YA A +W+DV IR+S+ +IKK SL+++
Sbjct: 479 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/486 (38%), Positives = 272/486 (55%), Gaps = 21/486 (4%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C T+ + Q H F+ K LF + I + I +S SY++ FN
Sbjct: 23 CTTLTHLQQTHT-FILKHALFQND----------INLSRFIHKTASLNYPSYSYSIFTFN 71
Query: 70 -NIPYPSTFSYNTIIRAHTLFSSPLN-AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
N P+P F YN II A L+SS AV +F +R + + D YS P++L++ L
Sbjct: 72 HNRPFP-IFVYNNIIYA--LYSSNAKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDF 128
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L + IH + G +V V +SL+ +Y + + A++LFDE V N +I Y
Sbjct: 129 GLGKQIHCVGVVTGLDKNVSVCSSLIQMYSCYD-VCSARKLFDEFGGNGCV-LNAMIVAY 186
Query: 188 VKAGDLAHARQLFDRMPFRD--AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
VK GD+++AR+LFD M RD SW +++GY Q+ EAI+LF M ++KPD IA
Sbjct: 187 VKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIA 246
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+++ LSACA LG L G+ IH YIE +++ L L+D YAK G I A+E+FE+ +
Sbjct: 247 ILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMK 306
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVDEAR 364
K + TW M+ GLA+HGLG+ +L FS M E R+KP+ VT + L CSH GLV+ R
Sbjct: 307 HKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGR 366
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F M S YG+ +++HYGCM DLLGRAG ++EA EM+ +MP + +W LL
Sbjct: 367 DYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTR 426
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
G+ E+AE A H+ L+P G Y +L++ YA+ RW + +R+ + ++K G S
Sbjct: 427 CGDAELAEEALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVS 486
Query: 485 LIQLNG 490
I++N
Sbjct: 487 FIEVNN 492
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 256/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A +F++I + S+N++I ++ AV++F +M+ V + PD ++ LL
Sbjct: 185 ITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSV 244
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ + L + +H ++ G D V N+LM +Y L+ A+ +FD++L +DVVS
Sbjct: 245 STKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSW 304
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+I+ Y G + A + F++MP ++ VSW +++ + Q EA+ LF M D +
Sbjct: 305 TCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVM 364
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
++ LV+ LS+C+ +G+L GK H YI N I + + L ++D YAKCG + TA+++
Sbjct: 365 ANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDV 424
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F EKN +WN ++ LA+HG G+ ++ F +M + + PD +T G L CSH+GLV
Sbjct: 425 FFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLV 484
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D + F+ M +G+S +++HY CM DLLGR GL+ EA+ +IKKMP+ DV VWS LLG
Sbjct: 485 DTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLG 544
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR +GN+ I + + +++L + G+Y +L+++Y+ + RW+D+ I + LD IKK
Sbjct: 545 ACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKC 604
Query: 481 AGCSLIQLNG 490
S I+++G
Sbjct: 605 RAISFIEIDG 614
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 213/460 (46%), Gaps = 85/460 (18%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL+ I +C ++KQ+ +HA + GL T +L T + S+S D L
Sbjct: 38 TLHYLIDQCISLKQLKHVHAQIILHGLA--------TQVL----TLGKLVSSSVQLRD-L 84
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA +F+ IP P+ F +N +I+ ++ S P+ +++L+ +M I P+ ++ PF+L+AC
Sbjct: 85 RYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKAC 144
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + L +H+Q KLG V N+++++Y + A+ +FD+I R +VS N
Sbjct: 145 AAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWN 204
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++I+GY K G + EEA+ +F M ++ ++P
Sbjct: 205 SMINGYSKMG-------------------------------RSEEAVLMFREMQEVGLEP 233
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D LV LS + G + G+ +H ++ + I +DS ++ L+D YAKCG + A +F
Sbjct: 234 DVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVF 293
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS---------------------------- 333
+ +K++ +W M+ A HGL +L +F+
Sbjct: 294 DQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVD 353
Query: 334 ---RMIEARIKPDGVTILGALVGCSHAGLVDEARK----LFDEMESVYGVSKELKHYGCM 386
RM ++ + + T++ L CSH G + ++ +FD ++ +
Sbjct: 354 LFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDN-----NITLSATLCNAI 408
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
D+ + G ++ A+++ MP V W+ ++G +HG
Sbjct: 409 IDMYAKCGALQTAMDVFFGMPEKNAV-SWNVIIGALALHG 447
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/426 (37%), Positives = 252/426 (59%), Gaps = 30/426 (7%)
Query: 73 YPSTFS----YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+PS S +N +I ++T + P NA+ +++Q+R + D + P +L+AC Q+
Sbjct: 117 FPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQ 176
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS----CNTLI 184
L + IH VLK G DVFV N+LM +Y + A+ +FD+++ RDVVS L+
Sbjct: 177 LGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALL 236
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
D Y K G L ARQLF+ + + VSW ++AG +S++ EE +LF M + +I P+ I
Sbjct: 237 DMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEI 296
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+++ ++ VD L+T LVD YAKCG IN A +F +
Sbjct: 297 TMLNK----------------------ERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 334
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++ WNA++ G AMHG G +L F+ M +KP+ +T +G L CSHAGLV E +
Sbjct: 335 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 394
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
KLF++M +G+ +++HYGCM DLLGRAGL++EA EMIK MP+ + VW L+ CR+
Sbjct: 395 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 454
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H N ++ E AA +++++PE+ G +++++YA A+RW D +R+++ +KK G S
Sbjct: 455 HKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHS 514
Query: 485 LIQLNG 490
+I++NG
Sbjct: 515 VIEVNG 520
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 253/432 (58%), Gaps = 9/432 (2%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPP-------DFYSFPFLL 118
+F IP P+ +N +I+A+ +AV ++ +M R + P D +++PFLL
Sbjct: 64 VFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLL 123
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+AC L + L + +H+ V + G V NSL+ +Y L A++ FD + +DVV
Sbjct: 124 KACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVV 183
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S NTLI + + G + AR+LF MP + VSW LV+GY A+++F M
Sbjct: 184 SWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEG 243
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+PD++++V+ L ACA+LG LE G+ I+ Y + + ++ L++ YAKCG I A+
Sbjct: 244 FEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEAL 303
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHA 357
++F EK++ +W+ + GLA HG R ++ F M E R+ P+G+T +G L CSHA
Sbjct: 304 QLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHA 363
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLVDE + D+M+ YGV ++HYGC+ DLLGR+G I+ AL+ I+ MP+ D +W
Sbjct: 364 GLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGS 423
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LL CR HG+VE A AAE +++L+P D G +LA+VY A RW +V R+ + +
Sbjct: 424 LLSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRST 483
Query: 478 KKNAGCSLIQLN 489
+K GCS+I+++
Sbjct: 484 RKTPGCSMIEVD 495
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 258/489 (52%), Gaps = 44/489 (8%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
T + K C + + Q+H H + L F S +I T++ + + SA
Sbjct: 142 TFPSLFKSCGVLCEGKQLHCH--STKLGFASDAYIQNTLMNMYSNCGCLVSARK------ 193
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+F+ + S S+ T+I A+ + P A+ LF +M S+ P+ + +L AC
Sbjct: 194 -----VFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTAC 248
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
++ A+ +H + + G + ++LM VYC
Sbjct: 249 ARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYC------------------------ 284
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
K G AR LF++MP ++ W ++ G+ + EEA+ LF M +K
Sbjct: 285 -------KCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKG 337
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D + + S L AC LG LE GK +H YIE +I VD L T LVD YAKCG I +A+ +F
Sbjct: 338 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 397
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ EK++ TW A++VGLAM G G +L F M + +KPD +T +G L CSHAGLV+
Sbjct: 398 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 457
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E F+ M + YG+ ++HYGCM D+LGRAG I EA ++I+ MPM D FV GLL
Sbjct: 458 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 517
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRIHGN+ +AE AA+ +++L P++GG Y +L+++Y++ WE K+R + IKK
Sbjct: 518 CRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPP 577
Query: 482 GCSLIQLNG 490
GCS I++ G
Sbjct: 578 GCSAIEVGG 586
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 209/421 (49%), Gaps = 47/421 (11%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+++C T+ Q+ QIHA L + LF+ P + K ++ + + L YA
Sbjct: 47 LEKCTTMSQLKQIHAQML-RTCLFVDP----------FSASKIVAFCALHDSGSLPYARL 95
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN IP P+TF+ N+IIR +T + P A++ + M + PD ++FP L ++C LC
Sbjct: 96 VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE 155
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H KLGF D ++ N+LM++Y L A+++FD+++ + VVS T+I
Sbjct: 156 ---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMI-- 210
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YAQ D EAI+LF M +KP+ I L
Sbjct: 211 -----------------------------GAYAQWDLPHEAIKLFRRMEIASVKPNEITL 241
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
V+ L+ACAR +LE K +H+YI+ I + L++ L+D Y KCG A ++F E
Sbjct: 242 VNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPE 301
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
KNLF WN M+ G +L F+ M + +K D VT+ L+ C+H G ++ + L
Sbjct: 302 KNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWL 361
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+E + ++ + D+ + G IE A+ + ++MP DV W+ L+ G + G
Sbjct: 362 HVYIEK-EKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP-EKDVMTWTALIVGLAMCG 419
Query: 427 N 427
Sbjct: 420 Q 420
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 146/352 (41%), Gaps = 40/352 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN +P + F +N +I H S A+ LF++M+ + D + LL AC+
Sbjct: 292 ARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACT- 350
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
H L+LG +HVY + E + DV L
Sbjct: 351 ----------HLGALELG---------KWLHVY-----------IEKEKIEVDVALGTAL 380
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K G + A ++F MP +D ++W L+ G A Q +A++LF M ++KPD
Sbjct: 381 VDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDA 440
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
I V L+AC+ G + +G + S G +VD + G I A ++ +
Sbjct: 441 ITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQ 500
Query: 303 S-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ + F +L +HG ++ ++IE K G +L + + S
Sbjct: 501 NMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNW-- 558
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
EA K E+ + K GC A +G G++ E ++ P +++
Sbjct: 559 EAAKKMRELMVERNIKKP---PGCSAIEVG--GVVHEFVKGDVSHPQSSEIY 605
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 277/513 (53%), Gaps = 59/513 (11%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+++ ++K++ Q +TK LF P ++ I +F +S S L YA +
Sbjct: 13 LQQLSSVKEVEQTQC-LITKSGLFNHP-----FVISKIISFLSLSPLGS-----LVYAQA 61
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL-- 124
IF + + F NT+IRA+ P+ A+ L++ M I D + +PF L+AC+++
Sbjct: 62 IFEDTTMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFMYPFGLKACARVLW 121
Query: 125 -------CSH----SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
C+ IH ++ +LG D F+ NSL+++Y L A+ +FDE+
Sbjct: 122 CNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARRVFDEMT 181
Query: 174 YR-------------------------------DVVSCNTLIDGYVKAGDLAHARQLFDR 202
+ +VVS N LI Y++ G + A+ +F
Sbjct: 182 EKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKAVFQE 241
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQG 262
MP RDAVSW +++AGY Q A+ LF M +++ +I L+S L ACA G LE G
Sbjct: 242 MPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLGACAETGALEIG 301
Query: 263 KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
+ IH ++ + +++ +LS LVD YAKCG++N A E+F + K++ WNAM+V LA+H
Sbjct: 302 RKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVH 361
Query: 323 GLGRLSLVYFSRMIEARI---KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
G +L FS M E + +P+ VT +G L+ CSH GLVDE RK F+ M + Y + +
Sbjct: 362 GYCEEALRLFSTM-EMSVDGARPNRVTFIGVLIACSHKGLVDEGRKFFNRMVNEYKIMPD 420
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM 439
+KHYGCM DLL R GL++EA MIK MP + +W LLG CR+H +V++AE + + +
Sbjct: 421 IKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLG 480
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
K++P G Y +L+++YA A RW DV + + L
Sbjct: 481 KMEPLRDGDYVLLSNIYAEAQRWNDVERASKIL 513
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 252/427 (59%), Gaps = 2/427 (0%)
Query: 66 SIFNN-IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
++FN + + FS+N++I + A+ FS MR +S+ P+ +FP +++CS L
Sbjct: 30 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ H Q L GF D+FV ++L+ +Y LRDA+ LFDEI +R++VS ++I
Sbjct: 90 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDN 243
GYV+ D A ++FD M RD +SW +++A YAQ+ E++++F M+ D +I +
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ L + L ACA G GK IH + + + F+ T ++D Y KCG + A + F+
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+EKN+ +W+AM+ G MHG + +L F M A +KP+ +T + L CSHAGL++E
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
F M + V ++HYGCM DLLGRAG ++EA ++IK M + D VW LLG CR
Sbjct: 330 WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACR 389
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H NV++ E +A + +L P++ G Y +L+++YA+A RWEDV ++R + + K G
Sbjct: 390 MHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGF 449
Query: 484 SLIQLNG 490
SL+ + G
Sbjct: 450 SLVDIKG 456
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 230/358 (64%), Gaps = 1/358 (0%)
Query: 134 HSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
H++++ +C DV N++++ Y + ++ +A+ LFDE+ R++VS N+++ G+VK G+
Sbjct: 84 HTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGN 143
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ A LF MP RD VSW +++A YAQ + EA+ LF M + +KP +VS LSA
Sbjct: 144 VEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSA 203
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA LG L++G ++H YI N+I V+S + T LVD YAKCG I+ A ++F + + K++ W
Sbjct: 204 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 263
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
N ++ G+A+HG + + F M EA ++P+ +T + L CSHAG+VDE +KL D M S
Sbjct: 264 NTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSS 323
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
YG+ +++HY C+ DLL RAGL+EEA+E+I MPM + LLGGCRIHGN E+ E
Sbjct: 324 SYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGE 383
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ ++ L+P G Y +L+++YA A +W+D K+R + I K G S+I+L G
Sbjct: 384 MVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKG 441
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 156/327 (47%), Gaps = 55/327 (16%)
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
++PF+++AC++ +H+ V+K GF CD +++NSL+H+Y L A++LF
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
RDVVS N +IDGYVK G++ H R +FDRM RD +SW T++ GYA + +EA +LF
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFD 121
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M E N + +S LS + KCG
Sbjct: 122 EM----------------------------------PERNLVSWNSMLSG-----FVKCG 142
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
+ A +F +++ +WN+ML A G +L F +M +KP T++ L
Sbjct: 143 NVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLS 202
Query: 353 GCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
C+H G +D+ L E+ S+ G + + D+ + G I A ++
Sbjct: 203 ACAHLGALDKGLHLHTYINDNRIEVNSIVGTA--------LVDMYAKCGKISLATQVFNA 254
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAE 432
M DV W+ ++ G IHG+V+ A+
Sbjct: 255 ME-SKDVLAWNTIIAGMAIHGHVKEAQ 280
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 39/319 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+N+++ + P A+ LF QMR V + P + LL AC+
Sbjct: 147 AFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAH 206
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L +L + +H +H Y + D + + + L
Sbjct: 207 LG--ALDKGLH------------------LHTY-----------INDNRIEVNSIVGTAL 235
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K G ++ A Q+F+ M +D ++W T++AG A +EA QLF M + ++P++
Sbjct: 236 VDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPND 295
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEI 300
I V+ LSAC+ G +++G+ + + + + +V+ + ++D A+ G + A+E+
Sbjct: 296 ITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY--DCVIDLLARAGLLEEAMEL 353
Query: 301 FES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+ E N A+L G +HG L + R+I + G IL + + + A
Sbjct: 354 IGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAA-AKK 412
Query: 360 VDEARKLFDEMESVYGVSK 378
D+ARK+ + M+ V G+SK
Sbjct: 413 WDDARKVRNLMK-VNGISK 430
>gi|449434194|ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 436
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 243/397 (61%), Gaps = 7/397 (1%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ +SQM S+P D +S F+L+AC+ + S+ +H+ + KLGF VFV SL+H
Sbjct: 40 ALAFYSQMHRQSVPHDSFSILFMLKACASSNNLSILHHLHAHITKLGFTTHVFVATSLLH 99
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
Y V H + A+ +FDE+ +++ V+ NT+I GY KAGD+ ARQLFDRMP RD SW +
Sbjct: 100 SY-VLHSFQLARLVFDEMPHKNSVTWNTMISGYSKAGDVHTARQLFDRMPSRDLASWSAM 158
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELE--QGKNIHRYIELN 272
+A Y + A+ LF +M+ I PD +A S L+ CA +G L GK++H ++ N
Sbjct: 159 IAAYINNRNYRGALLLFQDMIINGINPDQMAAGSILNGCAHMGSLGLLAGKSVHGFVVKN 218
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
+ ++ L T LVD YAKCG++ A +IF E+N+ TW A++ GLA HG + +LV F
Sbjct: 219 RWELNLELGTVLVDMYAKCGFLKYACQIFNLMSERNVRTWTALICGLAHHGCCKEALVLF 278
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
M ++P+ T G L C HAGLV E RK F+ +E G+ ++HYGC DLLGR
Sbjct: 279 ETMRHEGVEPNEFTFTGVLSACVHAGLVQEGRKYFNMIEEC-GLEIRIQHYGCFVDLLGR 337
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM-KLKPED-GGVYK 450
+GL+EEA +IK M + +V VWS LL C+ H + ++AE E ++ K++P++ GVY
Sbjct: 338 SGLLEEAYGVIKSMRLEPNVIVWSSLLSACKQHKSFDLAERVIEQILEKIEPDNHAGVYS 397
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+++D+Y D+W+D IR L+ ++K SLI+
Sbjct: 398 LVSDLYVLQDKWDDAENIRNLLNQ-HVRKGRAYSLIR 433
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 149/353 (42%), Gaps = 62/353 (17%)
Query: 16 IHQIHAHFLTKGLLFLSPCHILTTILYAIT--------------------TFKPISSASS 55
+H +HAH G F + + T++L++ T+ + S S
Sbjct: 75 LHHLHAHITKLG--FTTHVFVATSLLHSYVLHSFQLARLVFDEMPHKNSVTWNTMISGYS 132
Query: 56 PTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFP 115
D + A +F+ +P S++ +I A+ + A++LF M I PD +
Sbjct: 133 KAGD-VHTARQLFDRMPSRDLASWSAMIAAYINNRNYRGALLLFQDMIINGINPDQMAAG 191
Query: 116 FLLRACSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
+L C+ + S L +++H GF+ +++ EL E+
Sbjct: 192 SILNGCAHMGSLGLLAGKSVH------GFV------------------VKNRWELNLEL- 226
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
L+D Y K G L +A Q+F+ M R+ +W L+ G A C+EA+ LF
Sbjct: 227 ------GTVLVDMYAKCGFLKYACQIFNLMSERNVRTWTALICGLAHHGCCKEALVLFET 280
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN--QIRVDSFLSTGLVDFYAKC 291
M ++P+ LSAC G +++G+ IE +IR+ + VD +
Sbjct: 281 MRHEGVEPNEFTFTGVLSACVHAGLVQEGRKYFNMIEECGLEIRIQHY--GCFVDLLGRS 338
Query: 292 GYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
G + A + +S + E N+ W+++L H L+ +++E +I+PD
Sbjct: 339 GLLEEAYGVIKSMRLEPNVIVWSSLLSACKQHKSFDLAERVIEQILE-KIEPD 390
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 98/236 (41%), Gaps = 38/236 (16%)
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
+A+ + M + D+ +++ L ACA L ++H +I F++T L
Sbjct: 38 HKALAFYSQMHRQSVPHDSFSILFMLKACASSNNLSILHHLHAHITKLGFTTHVFVATSL 97
Query: 285 ------------------------------VDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
+ Y+K G ++TA ++F+ ++L +W+A
Sbjct: 98 LHSYVLHSFQLARLVFDEMPHKNSVTWNTMISGYSKAGDVHTARQLFDRMPSRDLASWSA 157
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG----LVDEARKLFDEM 370
M+ + R +L+ F MI I PD + L GC+H G L ++ F +
Sbjct: 158 MIAAYINNRNYRGALLLFQDMIINGINPDQMAAGSILNGCAHMGSLGLLAGKSVHGF-VV 216
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
++ + ++ EL + D+ + G ++ A ++ M +V W+ L+ G HG
Sbjct: 217 KNRWELNLELG--TVLVDMYAKCGFLKYACQIFNLMS-ERNVRTWTALICGLAHHG 269
>gi|297599623|ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
gi|125582938|gb|EAZ23869.1| hypothetical protein OsJ_07586 [Oryza sativa Japonica Group]
gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa Japonica Group]
Length = 493
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 243/413 (58%), Gaps = 36/413 (8%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD S F L CS+L SH +A +HS ++LG DV+V+N+ Y + A+ L
Sbjct: 69 PDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASAERL 128
Query: 169 F---------------------------------DEILYRDVVSCNTLIDGYVKAGDLAH 195
F D + ++VVS NT++ Y +AG L
Sbjct: 129 FSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGMLPK 188
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
AR+LFDRMP R+A +WG+++ G QSD CEEA+++F +M+ + P+ ALVS +SAC +
Sbjct: 189 ARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVASGVVPNEPALVSTVSACTQ 248
Query: 256 LGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
L +E G +H Y E LN + + L+T +VD Y KCG I A+ +F + +N+++WN
Sbjct: 249 LRWMEHGTWVHGYAERELNGA-MSAVLATAIVDMYGKCGSIRDAVRVFAAMPVRNIYSWN 307
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+M+ GLAM+G R +L F +M A ++P+ +T +G L CSH+GLVDE R LF +M +
Sbjct: 308 SMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYKMVNH 367
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+G+ +HYG M DLLGR+G + EA++ +K MP+ +W L G C+IHG VE+ E
Sbjct: 368 FGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHGEVELGEE 427
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
A+ +++L+P+ G Y +L+++YA ++RW+D+ +RR L K+ K G +++
Sbjct: 428 VAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPKGTGNAIV 480
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 276/492 (56%), Gaps = 22/492 (4%)
Query: 1 MTLNNFIKRCKTI---KQIHQIHAHFLTKGLL---FLSPCHILTTILYAITTFKPISSAS 54
MT +K C K+ Q+H+H + G L F+S I LYA
Sbjct: 411 MTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIH---LYA----------- 456
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
L A SIF+ + S+N++I ++ + + LF M+ + D +
Sbjct: 457 --ACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTM 514
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
++ AC+ L S+A + + + DV++ N+L+ YC +L+ A+++F ++
Sbjct: 515 VKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKD 574
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
++ V+ N +I Y K G+L A+++FD++P +D +SW +++ Y+Q+ ++++LF M
Sbjct: 575 KNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQM 634
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+KPD + + S LSACA LG L+ GK IH Y+ N I+ D+ + L+D +AKCG +
Sbjct: 635 QRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCM 694
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A+++F +EK+ +WN++++GLA +G +L F M+ +P+ VT LG L+ C
Sbjct: 695 QEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIAC 754
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
++ LV E F+ M++V+ + ++KHYGC+ +L RAG +E+A I +MP+ D V
Sbjct: 755 ANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVV 814
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LLG C+ HGNV +AE A + + +L P + G Y +L+++YA+ADRW D + +R+ +
Sbjct: 815 WRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMAD 874
Query: 475 GKIKKNAGCSLI 486
++K+ CS++
Sbjct: 875 TAVRKSPACSVV 886
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 184/313 (58%), Gaps = 1/313 (0%)
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
++VVS N +I G+ G++ +AR LFD+MP R+ VSW L+ GY ++ EA+ LF +M
Sbjct: 4 KNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHM 63
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
M I P I +++ + A + LG + G+ +H Y I D+ + L+D YAK G +
Sbjct: 64 MAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSV 123
Query: 295 NTAIEIF-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
++++F E +NL +W +++ G AMHGL +L F+ M A I+P+ +T L +
Sbjct: 124 QNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINA 183
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSH GLV++ F M Y + E+KH+GC+ D+LGRAG + EA ++I+ +P+ +V
Sbjct: 184 CSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVI 243
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LLG C +G VE+ + A + + L+ E GG + VL++V R+ D + R+ LD
Sbjct: 244 VWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLD 303
Query: 474 AGKIKKNAGCSLI 486
KI K G +L+
Sbjct: 304 ERKIVKVPGLALV 316
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 213/445 (47%), Gaps = 76/445 (17%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++ + ++HAH + GL C YA++ K I S + +D L +A +F I
Sbjct: 324 MEAVKKLHAHLVVSGL---HNCQ------YAMS--KVIRSYALQQSD-LVFAHKVFEQIE 371
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P+TF +NT++R +P +A+V + + + + PD +FPF+L+AC++ + +
Sbjct: 372 SPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQ 431
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+HS V+KLGF+ D+FV NSL+H+Y L A+ +FDE+L +DVVS N+LI
Sbjct: 432 MHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLI-------- 483
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
GY+Q ++ +E + LF M +++ D + +V +SA
Sbjct: 484 -----------------------GGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISA 520
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
C LG+ + RYIE N I VD +L L+D+Y + G + +A ++F ++KN T
Sbjct: 521 CTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTL 580
Query: 313 NAMLVGLAMHG-----------LGRLSLVYFSRMI--------------------EARIK 341
NAM+ A G + L+ +S MI A++K
Sbjct: 581 NAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVK 640
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
PD V I L C+H G +D + + D + + + + D+ + G ++EAL+
Sbjct: 641 PDAVVIASVLSACAHLGALDLGKWIHDYVRR-NNIKTDTIMENSLIDMFAKCGCMQEALQ 699
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHG 426
+ +M D W+ ++ G +G
Sbjct: 700 VFTEME-EKDTLSWNSIILGLANNG 723
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 138/320 (43%), Gaps = 40/320 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA +F+ +P + S+ +I +T AV LF M I P + ++ A
Sbjct: 22 IEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPA 81
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL-YRDVVS 179
S L + + +H +K G + D V NSL+ +Y ++++ ++FDE+L R++VS
Sbjct: 82 ISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVS 141
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
++I +G+A EA++LF M I
Sbjct: 142 WTSII-------------------------------SGFAMHGLSVEALELFAEMRRAGI 170
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTA 297
+P+ I +S ++AC+ G +EQG + + + + +D + ++D + G + A
Sbjct: 171 RPNRITFLSVINACSHGGLVEQGLAFFKSM-VYEYNIDPEIKHFGCIIDMLGRAGRLCEA 229
Query: 298 IEIFES-SQEKNLFTWNAMLVGLAMHG---LGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+I E E N+ W +L + +G +G+ ++ S + E D + L
Sbjct: 230 EQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDL-ERESGGDFAVLSNVLNE 288
Query: 354 CSHAGLVDEARKLFDEMESV 373
++ARKL DE + V
Sbjct: 289 LGRFSDAEQARKLLDERKIV 308
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 272/520 (52%), Gaps = 47/520 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L IK+C T K + A + L C ++ + A T+FK L
Sbjct: 30 NLKKIIKQCSTPKLLESALAAMIKTSLN--QDCRLMNQFITACTSFKC-----------L 76
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A+S + P+ F YN + + S P+ ++ L+ +M S+ P Y++ L++A
Sbjct: 77 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 136
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV--- 178
S + +++ + + K GF V + +L+ Y +R+A+++FDE+ RD +
Sbjct: 137 S--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGGIREARKVFDEMPERDDIAWT 194
Query: 179 ----------------------------SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
+ N LI+GY+ G+L A LF++MP +D +S
Sbjct: 195 TMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIIS 254
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W T++ GY+Q+ + EAI +F MM+ I PD + + + +SACA LG LE GK +H Y
Sbjct: 255 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 314
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
N +D ++ + LVD Y+KCG + A+ +F + +KNLF WN+++ GLA HG + +L
Sbjct: 315 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALK 374
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F++M +KP+ VT + C+HAGLVDE R+++ M Y + ++HYG M L
Sbjct: 375 MFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 434
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
+AGLI EALE+I M + +W LL GCRIH N+ IAE A +M L+P + G Y
Sbjct: 435 SKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF 494
Query: 451 VLADVYANADRWEDVVKIR-RSLDAGKIKKNAGCSLIQLN 489
+L +YA +RW DV +IR R + G K G S I+++
Sbjct: 495 LLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 534
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 283/556 (50%), Gaps = 87/556 (15%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I+ C I+Q+ QIHA + L + I+T I I +F +S A L YA
Sbjct: 12 LIETCTNIQQLKQIHAKSIISSLSYTQ--FIITKI---INSF--LSHAC------LDYAT 58
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLRACSQL 124
+FN P F YN +IRA++ +P A+ ++++MR +I D Y++PF+ +AC+
Sbjct: 59 QVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQ 118
Query: 125 CSHSLAQTIHSQVLKL-----GF----------IC----------------DVFVLNSLM 153
+ + +H ++++ GF +C DV N+L+
Sbjct: 119 FAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALI 178
Query: 154 HVYC----------VFHRLRDAQE-------------------------------LFDEI 172
Y VF + + +E + D +
Sbjct: 179 TGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMV 238
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
L V LI+ YVK G L AR+LFD +P ++ V W +L+ GY Q E I+L
Sbjct: 239 LREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLR 298
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M ++KPD + LSACA++G G +HR+ E I D F+ T L+D YAKCG
Sbjct: 299 EMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIW-DVFIGTALIDMYAKCG 357
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
+I A ++F+ E+N+ TWNA+L G A HG ++ FS M E+ +PD +T L L
Sbjct: 358 FIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLH 417
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C+H+GLV+ ++ FD M Y + ++HYGCM DLLGRAGL++EA E+IK M + +V
Sbjct: 418 ACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNV 477
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
VW LL C IHGN+EI E AA H++KL DGG Y +LA++YA+A R+ V +R +
Sbjct: 478 VVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMM 537
Query: 473 DAGKIKKNAGCSLIQL 488
I K+ GCS+I++
Sbjct: 538 VEKGICKSHGCSMIEI 553
>gi|125540362|gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
Length = 493
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 243/413 (58%), Gaps = 36/413 (8%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD S F L CS+L SH +A +HS ++LG DV+V+N+ Y + A+ L
Sbjct: 69 PDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASAERL 128
Query: 169 F---------------------------------DEILYRDVVSCNTLIDGYVKAGDLAH 195
F D + ++VVS NT++ Y +AG L
Sbjct: 129 FSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGMLPK 188
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
AR+LFDRMP R+A +WG+++ G QSD CEEA+++F +M+ + P+ ALVS +SAC +
Sbjct: 189 ARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVACGVVPNEPALVSTVSACTQ 248
Query: 256 LGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
L +E G +H Y E LN + + L+T +VD Y KCG I A+ +F + +N+++WN
Sbjct: 249 LRWMEHGTWVHGYAERELNGA-MSAVLATAIVDMYGKCGSIRDAVRVFAAMPVRNIYSWN 307
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+M+ GLAM+G R +L F +M A ++P+ +T +G L CSH+GLVDE R LF +M +
Sbjct: 308 SMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYKMVNH 367
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+G+ +HYG M DLLGR+G + EA++ +K MP+ +W L G C+IHG VE+ E
Sbjct: 368 FGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHGEVELGEE 427
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
A+ +++L+P+ G Y +L+++YA ++RW+D+ +RR L K+ K G +++
Sbjct: 428 VAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPKGTGNAIV 480
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 254/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA ++F+ + ++NT+I + F A LF +M+ ++ PD ++ A
Sbjct: 165 INYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSA 224
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + + + I+ +++ D +L +L+ +Y + A E F ++ R++
Sbjct: 225 CGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVS 284
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++ GY KAG L AR +FD+ +D V W T+++ YA+SD +EA+++F M IK
Sbjct: 285 TAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIK 344
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + ++S +SAC LG L++ K +HRY LN + + L++ YAKCG ++ A ++
Sbjct: 345 PDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDV 404
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +N+ +W++M+ AMHG SL F++M + ++P+ VT +G L GCSH+GLV
Sbjct: 405 FEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLV 464
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E +K+F M Y ++ +++HYGCM DL GRA L+ EALE+I+ MPM +V +W L+
Sbjct: 465 EEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMS 524
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+HG +E+ E AA+ ++KL+P+ G +++++YA RW+ V IR ++ K+ K
Sbjct: 525 ACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKE 584
Query: 481 AGCSLIQLNG 490
G S I LNG
Sbjct: 585 KGLSRIDLNG 594
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 204/449 (45%), Gaps = 78/449 (17%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CK++ I Q+HA HIL T++ + + S ++ LSYAL++F+
Sbjct: 25 CKSLNHIKQLHA-------------HILRTVINHKLNSFLFNLSFSSSSINLSYALNLFS 71
Query: 70 NI-PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+I P P + +N+++R + P ++ + ++R V D SFP +L+A S++ +
Sbjct: 72 SISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALF 131
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H K+ + D FV LM +Y R+ A+ +FDE+ RDVV+ NT+I+ Y
Sbjct: 132 EGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYC 191
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+ G L +EA +LF M D ++ PD + L +
Sbjct: 192 RFGLL-------------------------------DEAFKLFEEMKDSNVMPDEMILCN 220
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDS------------------------------ 278
+SAC R G + + I+ ++ N +R+D+
Sbjct: 221 IVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRN 280
Query: 279 -FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
F+ST +V Y+K G ++ A IF+ ++ K+L W M+ A + +L F M
Sbjct: 281 LFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCC 340
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
+ IKPD VT+L + C + G +D+A K + G+ L + ++ + G ++
Sbjct: 341 SGIKPDVVTMLSVISACVNLGTLDKA-KWVHRYTHLNGLESVLPIDNALINMYAKCGGLD 399
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
A ++ +KMP +V WS ++ +HG
Sbjct: 400 AARDVFEKMPT-RNVVSWSSMINAFAMHG 427
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/491 (35%), Positives = 270/491 (54%), Gaps = 14/491 (2%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL ++ C+++ + QI A F+T GL S H + L +F ISS +
Sbjct: 14 TLIALLENCRSMSEFKQIQAFFITSGL---SQHHPFASRLL---SFSAISSWGD-----I 62
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
++ IF IP P+ ++N+IIR + +P +V +F +M + PD ++PF+ +A
Sbjct: 63 DHSYRIFLQIPSPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAV 122
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
++L LA +H ++ K G D F+ NSL+H+Y + A+++FDE+L R+ VS N
Sbjct: 123 ARLSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWN 182
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++DGY K GDL ARQ+F+ MP RD VSW +++ G + + A+ +F M + K
Sbjct: 183 AMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKA 242
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + +VS L ACA LG LEQG+ +H+Y+ N +R L T L+D YAKCG I AI +F
Sbjct: 243 NEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVF 302
Query: 302 ES--SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+ ++ WN ++ GLA HGL SL F M I PD +T L C+H GL
Sbjct: 303 RGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGL 362
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V EA F + G+ + +HY CM D+L RAG + EA + I +MPM + LL
Sbjct: 363 VHEAWHFFKSLGK-QGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALL 421
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
GC H ++AE +++L+P+ G Y L++VYA W++ +R +++ +KK
Sbjct: 422 NGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKK 481
Query: 480 NAGCSLIQLNG 490
+ G S +++ G
Sbjct: 482 SPGFSFVEVLG 492
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 255/433 (58%), Gaps = 5/433 (1%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-----IPPDFYSFPF 116
YA +F + P+ F YN +IRA+ + A+ + QM S PD ++FPF
Sbjct: 37 EYANLLFKRVADPNAFLYNAMIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPF 96
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+++ C+ L ++L + +H K G + + NSL+ +Y L DA +F+E+ RD
Sbjct: 97 VVKXCAGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERD 156
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
VS NTLI G+V+ G + AR +F+ + + SW +V+GYA+ A++ F M
Sbjct: 157 AVSWNTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQM 216
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+DI+ D I+LVS L ACA+LG LE GK IH Y + D + L++ YAK G ++
Sbjct: 217 VDIELDEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDE 276
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+F E+++ +W+ M+VGLA HG R ++ F M +A+++P+ +T +G L C+H
Sbjct: 277 GRRLFHKMNERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAH 336
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGL++E F+ ME + ++HYGC+ +LLG +G +++ALE+IKKMPM D +W
Sbjct: 337 AGLLNEGLGYFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWG 396
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
L CR HGN+EI A EH+++L+P+D G Y L+++YA+ +W+ V ++R+ + +
Sbjct: 397 LLSSSCRSHGNLEIVAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKY 456
Query: 477 IKKNAGCSLIQLN 489
+ K GCS I+++
Sbjct: 457 MNKTPGCSSIEVD 469
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 66/318 (20%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAH-------------------TLFSSPL------ 93
D L A +F + S+NT+I H T+FS
Sbjct: 140 DSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYA 199
Query: 94 ----NAVVL--FSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVF 147
+AV L F +M+ V I D S +L AC+QL + L + IH K GF+ D+
Sbjct: 200 RIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDIC 259
Query: 148 VLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRD 207
V N+L+ VY + + + LF ++ RDV+S +T+I
Sbjct: 260 VCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMI----------------------- 296
Query: 208 AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHR 267
G A + EAI+LF M ++P+ I V LSACA G L +G
Sbjct: 297 --------VGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFE 348
Query: 268 YIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFESSQEK-NLFTWNAMLVGLAMHGLG 325
+E + G LV+ G ++ A+E+ + K + W + HG
Sbjct: 349 SMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNL 408
Query: 326 RLSLVYFSRMIEARIKPD 343
+ + ++E ++PD
Sbjct: 409 EIVAIAMEHLLE--LEPD 424
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/426 (38%), Positives = 249/426 (58%), Gaps = 12/426 (2%)
Query: 76 TFSYNTIIRA--HTLFSSPL--NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
+F +N IIRA H + SSP + + ++ +MR + PDF++FPFLL + L Q
Sbjct: 24 SFLWNIIIRAIVHNV-SSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
H+Q+L G D FV SL+++Y LR AQ +FD+ +D+ + N++++ Y KAG
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-----DLDIKPDNIAL 246
+ AR+LFD MP R+ +SW L+ GY + +EA+ LF M + ++P+ +
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES-SQ 305
+ LSAC RLG LEQGK +H YI+ + +D L T L+D YAKCG + A +F +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSHAGLVDEAR 364
+K++ ++AM+ LAM+GL FS M + I P+ VT +G L C H GL++E +
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F M +G++ ++HYGCM DL GR+GLI+EA I MPM DV +W LL G R+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
G+++ E A + +++L P + G Y +L++VYA RW +V IR ++ I K GCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 485 LIQLNG 490
+++ G
Sbjct: 443 YVEVEG 448
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/485 (35%), Positives = 265/485 (54%), Gaps = 45/485 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
N + C + IHQI A + + L H TTI + T + + L A
Sbjct: 16 NLLTNCCSPCHIHQIQAQLIVQNL------HSNTTIAHHFIT-------ACQSLGLLDSA 62
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
L +F + P F N++IRA + +P +++ M + SI P+ ++FPFLL++ +
Sbjct: 63 LLLFTHHSKPHVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLADF 122
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S Q IH+ V+KLG D++V NSL++VY SC
Sbjct: 123 KGLSEGQCIHTHVVKLGQFDDIYVQNSLLNVY---------------------ASC---- 157
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GD+ ++FD MP RD VSW L+ GY +++ ++A+ F M + P+++
Sbjct: 158 ------GDMGLCMRVFDEMPHRDVVSWTVLITGYRSAERYDDALIAFEQMQYAGVVPNHV 211
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ALSACA G LE G IH +I + D L T L+D Y KCG I + +F S
Sbjct: 212 TMVNALSACADFGALEMGVWIHEFIRRSGWEFDVILGTSLIDMYGKCGRIEEGLVVFRSM 271
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+EKN+FTWN+++ GLA+ G ++ +F RM + IK D VT++ L CSH+G+V R
Sbjct: 272 KEKNVFTWNSLIKGLALARSGAEAVWWFYRMEQEGIKADEVTLIAVLCACSHSGMVQMGR 331
Query: 365 KLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++F M Y +KHY C+ DLL RAG+++EA+E++ +MP + +W L GCR
Sbjct: 332 QIFGSLMNGKYEFFPGVKHYACVIDLLARAGILQEAMEVMTRMPFEPNKVMWGAFLAGCR 391
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HG++E++E AA +++L+P +G Y +L+++YA RW DV K+RR + G + K+ GC
Sbjct: 392 AHGDLELSEFAARKLVELEPGNGAYYVLLSNIYAEMGRWSDVEKVRRLMKEGGLTKDLGC 451
Query: 484 SLIQL 488
S I+L
Sbjct: 452 SSIEL 456
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 266/479 (55%), Gaps = 17/479 (3%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
+T Q+ +IHAHFL GL + L IL + + + ++YA IF
Sbjct: 20 ETRTQLREIHAHFLRHGL------NQLNQILSHFVSI-------CGSLNKMAYANRIFKQ 66
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P+ +N +I+ ++L + LFS M+ I PD Y+ LL+ACS L L
Sbjct: 67 TQNPTIILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLG 126
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ +H +VL +GF + ++ +Y + DA+++FDE+ RDV+ N +I G+ K
Sbjct: 127 KCMHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKR 186
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
GD+ LF +M R VSW +++ AQS + EA+ LF +M+D KPD +V+ L
Sbjct: 187 GDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVL 246
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFESSQEKN 308
CARLG ++ GK IH Y + + + D F++ G LVDFY K G TA +F+ KN
Sbjct: 247 PICARLGSVDVGKWIHSYAKSSGLYRD-FVAVGNALVDFYNKSGMFETARRVFDEMPRKN 305
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ +WN ++ GLA++G G L + M+ ++P+ T +G L C+HAGL + R+L
Sbjct: 306 VISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLA 365
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG-DVFVWSGLLGGCRIHGN 427
M + + +L+HYGCM DLLGR+G + EA ++I+ MP G + +W LL CR HG+
Sbjct: 366 SMVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGD 425
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
VE+A A + ++ L+P + G Y +L+++YA +RW+ V +R + +KK G S+I
Sbjct: 426 VELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKTPGQSVI 484
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 277/482 (57%), Gaps = 19/482 (3%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+KQ QIHAH +T L S +I + IL A SP D YA ++F +IP
Sbjct: 1 MKQTKQIHAHAITNNLTRFS--YISSRILAFF--------ALSPRGD-FRYAETLFTHIP 49
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P+ F YN+II ++T S +F++M +I P+ ++F L++AC L S +
Sbjct: 50 NPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSS---LEQ 106
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+ + +KLG DV+ ++S+++ + + A+++FDE R+VV +L+ GY G
Sbjct: 107 VFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGL 166
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-----IKPDNIALV 247
+ AR +FD+MP R+ S+ +V+GY ++ E +QLF + D +K + LV
Sbjct: 167 VNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLV 226
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L+AC +G E+GK IH Y+E N + D L T L+DFY KCG++ A ++F K
Sbjct: 227 SVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVK 286
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
++ TW+AM++GLA++G +++L F +M + KP+ VT +G L C+H L E+ +LF
Sbjct: 287 DVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLF 346
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
M Y ++ ++HYGC+ D+L R+G +++AL I M + D +W LL GC +HG+
Sbjct: 347 GIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGH 406
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
E+ + +++++ +P+ G Y +LA++YAN +WE V ++R+ + + +G S I+
Sbjct: 407 YELGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIE 466
Query: 488 LN 489
++
Sbjct: 467 ID 468
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 97/234 (41%), Gaps = 14/234 (5%)
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--GYINTAIEIFESSQEKNLFTWNAML 316
++Q K IH + N + S++S+ ++ F+A G A +F N+F +N+++
Sbjct: 1 MKQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSII 60
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
+ F++M+ I+P+ T + C +++ L ++ G
Sbjct: 61 TSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLSMKL----GN 116
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
S ++ + + + I A ++ + +V W+ L+ G + + + A +
Sbjct: 117 SSDVYFVSSVINAFSKHSAIHLARQVFDECS-NRNVVCWTSLVSG---YCSCGLVNEARD 172
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
K+ + Y + Y + + V++ R L KK+ GC+ ++ NG
Sbjct: 173 VFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELK----KKDKGCACLKFNG 222
>gi|297721835|ref|NP_001173281.1| Os03g0169300 [Oryza sativa Japonica Group]
gi|19071631|gb|AAL84298.1|AC073556_15 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108706397|gb|ABF94192.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125585070|gb|EAZ25734.1| hypothetical protein OsJ_09569 [Oryza sativa Japonica Group]
gi|215769145|dbj|BAH01374.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674238|dbj|BAH92009.1| Os03g0169300 [Oryza sativa Japonica Group]
Length = 510
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 284/498 (57%), Gaps = 26/498 (5%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L +F +C T +++ +H L + L P L + F +A SP D L
Sbjct: 13 LVSFAGKCSTKRKLRLLHGALLRRRHLL--PTADAVAALAKLLRF----AAVSPAGD-LR 65
Query: 63 YALSIFN-NIPYPST------FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFP 115
+A ++ + ++P+ S+ F YNT++R SSP A+ LFS MR PD ++F
Sbjct: 66 HAAALLSLHLPFLSSASSHLAFFYNTLMRGLAASSSPAAAIELFSAMRRAGAAPDAFTFT 125
Query: 116 FLLRACSQLCSHS-LAQTIHSQVLKLGFI----CDVFVLNSLMHVYCVFHRLRDAQELFD 170
F L++CS+ S L +H+Q +K G + V V N+L+H Y + DA+ +FD
Sbjct: 126 FALKSCSRCVSQRRLPSDLHAQAIKHGCLGAGSSHVHVHNALLHGYSSRAAVGDARRVFD 185
Query: 171 EILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
E+ RDV+S + L+ ++KA DL AR +FD+MP RD VSW +++ YA++ + +EA+ L
Sbjct: 186 EMPARDVISFSGLLTLHLKANDLDAARVVFDQMPHRDVVSWTAMISAYARARRPQEALAL 245
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
F M ++PD + ++S +SAC LG+L G+ + +Y++ N L L+D YAK
Sbjct: 246 FDAM---PVQPDEVTMLSVVSACTALGDLATGERVCQYVDSNGFGWMVSLRNALMDMYAK 302
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTIL 348
CG + A +F+ ++L +WN + A HG ++ F RM+ +KPDG T+L
Sbjct: 303 CGSLTEARNLFDGMTVRSLASWNTFISAYASHGDVESTVALFHRMLADGKSVKPDGTTLL 362
Query: 349 GALVGCSHAGLVDEARKLFDEMES-VYG-VSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
L +H G V+E R +F+ + S YG V ++HYGCM DLLGRAG +EEA +MI++M
Sbjct: 363 AVLTAYAHKGFVEEGRAMFNAILSGNYGKVDLTIEHYGCMVDLLGRAGQLEEAYKMIEQM 422
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
P+ + VW LLG CR HG++ +AE A + + L PE+GG Y +L+D+YA + R + +
Sbjct: 423 PIPSNSVVWGALLGACRTHGDINMAERAVQKLRSLNPEEGGYYILLSDMYAASGRTTEAM 482
Query: 467 KIRRSLDAGKIKKNAGCS 484
+IRR ++ +K AG S
Sbjct: 483 EIRRIMNQAGARKTAGQS 500
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 265/491 (53%), Gaps = 47/491 (9%)
Query: 5 NFIK-RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+F+K C +I + Q HA L H+L L+ + K IS + + L+Y
Sbjct: 15 DFLKTHCTSISKTKQAHALLLRT--------HLLHNPLF---SSKLISFLALSHSGDLNY 63
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F + P F NT+IR + +P AV L+ M +P D Y++PF+L AC++
Sbjct: 64 ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACAR 123
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + L + H +VLK GF D+FV+N+L
Sbjct: 124 LGAVKLGRRFHCEVLKNGFGSDLFVINAL------------------------------- 152
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPD 242
I Y G A +FD RD V+W ++ + E+A L M LD ++PD
Sbjct: 153 IQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPD 212
Query: 243 NIALVSALSACARLGELEQGKNIHRY---IELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ +VS + ACA+LG LE+GK +H Y ++ +I D L T LVD YAKCG I+ A++
Sbjct: 213 EVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQ 272
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F + +N+FTWNA++ GLAMHG G ++ F +M ++ PD VT + L CSHAGL
Sbjct: 273 VFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGL 332
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDE +F M++ + + ++HYGC+ DLL RA +++AL I+ MP+ + +W+ LL
Sbjct: 333 VDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL 392
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CR G+ ++AE V++L+P+ G Y +L+++YA +W+ +K+R+ + I+K
Sbjct: 393 GACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEK 452
Query: 480 NAGCSLIQLNG 490
GCS I+LNG
Sbjct: 453 TPGCSWIELNG 463
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 263/505 (52%), Gaps = 72/505 (14%)
Query: 49 PISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFS-SPLNAVVLFSQMRTVSI 107
P + +S+ + P + + P PS+ T A T + +P +A+ FS M
Sbjct: 73 PPTRSSASSRPPAASSTRSGTRTPTPSS---PTPCSAPTRWGGAPRDALAAFSAMPRR-- 127
Query: 108 PPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
D +++ FL++A S + + +HS V+KLG + D FV N+L+ Y DA++
Sbjct: 128 --DSFTYSFLIKALS-AAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARK 184
Query: 168 LFDEILYRDVVSCNT-------------------------------LIDGYVKAGDLAHA 196
+FDE+ RDVVS NT ++DGY KAG++ A
Sbjct: 185 VFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAA 244
Query: 197 RQLFDRMPFRDAVSWGTLVAGY-------------------------------AQSDQCE 225
+LF RMP R+ VSW T+V+GY AQ +
Sbjct: 245 FELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVD 304
Query: 226 EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
EA +LF M + ++ D A+VS L+ACA G L GK IHRY+ + + + L+
Sbjct: 305 EAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALI 364
Query: 286 DFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
D + KCG +N A +F++ +K+ +WN+++ G AMHG G +L F++M + PD
Sbjct: 365 DMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDA 424
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
VT++ L C+H G VDE R+ F ME YG+ +++HYGCM DLLGR GLI+EA+++IK
Sbjct: 425 VTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIK 484
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
MP + +W LL CR+H NVE AE A + KL+P + G Y VL+++YA A +W D
Sbjct: 485 SMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSD 544
Query: 465 VVKIRRSLDAGKIKKNAGCSLIQLN 489
+ K R + +K AG S ++LN
Sbjct: 545 MAKARMQMKGTGSQKTAGSSWVELN 569
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/510 (34%), Positives = 268/510 (52%), Gaps = 53/510 (10%)
Query: 2 TLNNFIKRCKTI---KQIHQIHAHFLTKGLLFLSPCHILTTILYAITT---FKPISSASS 55
T +K C + ++ QIH H L GL H +YA + + + S
Sbjct: 134 TFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKS 193
Query: 56 PTTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
D +S+ A +F IP S+N +I + A+ F
Sbjct: 194 SLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQ 253
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
+M+ ++ P+ + +L AC+Q S L + S + G ++ ++N+L
Sbjct: 254 EMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNAL-------- 305
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
ID Y K GDL AR LF+ + +D +SW ++ GY+
Sbjct: 306 -----------------------IDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV-DSF 279
+ +EA+ LF M +++P+++ VS L ACA LG L+ GK IH YI+ + + ++
Sbjct: 343 MNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
L T L+D YAKCG I A ++F + K+L +WNAM+ GLAMHG ++L F +M +
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+PD +T +G L CSHAGLV+ R+ F M Y +S +L+HYGCM DLLGRAGL +EA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANA 459
++K M M D +W LLG CR+HGNVE+ E AA+H+ +L+PE+ G Y +L+++YA A
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Query: 460 DRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
RW+DV +IR L+ +KK GCS I+++
Sbjct: 583 GRWDDVARIRTKLNDKGMKKVPGCSSIEVD 612
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 231/426 (54%), Gaps = 12/426 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ CK+ + + QIH+ + GL H L + F IS + LSYAL
Sbjct: 38 LLSTCKSFQNLKQIHSQIIKTGL------HNTQFALSKLIEFCAISPFGN-----LSYAL 86
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F +I P+ F +NT+IR ++L SSP+ A+ + +M + P+ Y+FPFLL++C+++
Sbjct: 87 LLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVG 146
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + IH VLKLG D FV SL+++Y L A+ +F + RD VS LI
Sbjct: 147 ATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALIT 206
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY G L AR+LF+ +P RDAVSW ++AGYAQS + EEA+ F M ++ P+
Sbjct: 207 GYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNEST 266
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ LSACA+ G LE G + +IE + + + L L+D Y+KCG ++ A ++FE
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
EK++ +WN M+ G + + +L F +M ++ ++P+ VT + L C++ G +D +
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+ ++ + + + D+ + G IE A ++ M + W+ ++ G +H
Sbjct: 387 IHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK-PKSLGSWNAMISGLAMH 445
Query: 426 GNVEIA 431
G+ +A
Sbjct: 446 GHANMA 451
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 271/494 (54%), Gaps = 49/494 (9%)
Query: 2 TLNNFIKRCKTIKQIH--QIHAHFLTKG--LLFLSPCHILTTILYAITTFKPISSASSPT 57
+L++F+ +C T+ H Q+HAH T G L +SP LYA++
Sbjct: 4 SLDSFLSKCTTLSLPHTKQLHAHLFTTGQFRLPISPARSKLLELYALSL----------- 52
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
LS+A+ F+ I PST +N IIR +P NA + M + S D + F+
Sbjct: 53 -GNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFV 111
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+AC+++ + + IH+ +++ GFI D +
Sbjct: 112 LKACARVLARLESIQIHTHIVRKGFIADALL----------------------------- 142
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
TL+D Y K G++ A ++FD M RD SW L++G+AQ + EA+ LF M
Sbjct: 143 --GTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEID 200
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
KP+ I+++ ALSACA+LG+ ++G+ IH YI++ + +++ + ++D YAKCG+++ A
Sbjct: 201 GFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKA 260
Query: 298 IEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+FES S K++ TWN M++ AMHG G +L F +M ++ + PD V+ L L C+H
Sbjct: 261 YLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNH 320
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
GLV+E +LF+ ME+ GV +KHYG + DLLGRAG + EA +++ MP D+ +W
Sbjct: 321 GGLVEEGFRLFNSMENC-GVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQ 379
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG R H NVEIAE + ++++ G + +L++VYA +RW DV ++R ++
Sbjct: 380 TLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRD 439
Query: 477 IKKNAGCSLIQLNG 490
+KK G S I+ NG
Sbjct: 440 VKKVPGLSYIEGNG 453
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 243/423 (57%), Gaps = 2/423 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F IP FS+ +I A++L+S MR + P+ LL AC Q
Sbjct: 278 ARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQ 337
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S + HS ++K GF+C F+ +++ Y R+ A + + S N +
Sbjct: 338 SVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVM 397
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ K G + ARQ+FD MP +D SW T+++GYAQ++ + A+ LF M+D ++P+
Sbjct: 398 IVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNE 457
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I +VS SA A LG+L +G+ H Y+ I ++ LS ++D YAKCG I+TA+++F
Sbjct: 458 ITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQ 517
Query: 304 SQEKN--LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
++K + WNA++ GLAMHG LSL FS + IK + +T LG L C HAGLV+
Sbjct: 518 IKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVE 577
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ F M++ +GV +KHYGC+ DLLGR G + EA E+++ MPM DV +W LL
Sbjct: 578 VGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAS 637
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
R HG VEI E AAE++ +L+P G +L+++YA+A WED +RR++ + ++ ++
Sbjct: 638 SRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSP 697
Query: 482 GCS 484
G S
Sbjct: 698 GYS 700
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 200/404 (49%), Gaps = 35/404 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F +P SY T+I A+ +F MR+ + P+ + ++ A
Sbjct: 143 LENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSA 202
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS + + +H+ V+KL F V + +L+H+YCVF L+D + LF+E+ R+ VS
Sbjct: 203 CSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSW 262
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ GYVK+G + AR+LF+R+P RD SW ++ G+ Q + +A+ L+ M D+
Sbjct: 263 NVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLH 322
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--------- 291
P+ + +V LSAC + +E+G+ H I N F+ ++ FYA C
Sbjct: 323 PNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQ 382
Query: 292 ----------------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
G I+ A +IF+ EK++F+W+ M+ G A + L ++L
Sbjct: 383 YQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVAL 442
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMAD 388
F MI+++++P+ +T++ + G + E R + + V ++ L + D
Sbjct: 443 DLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLS--AAIID 500
Query: 389 LLGRAGLIEEALEMIKKMP-MGGDVFVWSGLLGGCRIHGNVEIA 431
+ + G I+ AL++ +++ V W+ ++ G +HG+ ++
Sbjct: 501 MYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLS 544
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 234/526 (44%), Gaps = 98/526 (18%)
Query: 40 ILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSP--LNAVV 97
++ +I F P P PLS+ ++ + + STFS T+ SSP L +
Sbjct: 2 VVSSIPKFFP-----RPIAIPLSFPPPLY--LKWVSTFS--------TIESSPRPLQNLS 46
Query: 98 LFSQMRTVSIPPDF-YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY 156
F R S D S L+ C+ + S Q IH+ VLK GF + F+LNSL+++Y
Sbjct: 47 SFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMY 106
Query: 157 CVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
L A+ LFD D VSCN ++ GYVK L +ARQLF +MP R VS+ T++
Sbjct: 107 VKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMIL 166
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI------- 269
G AQ+D EAI++F +M + P+ + + S +SAC+ +G + + +H +
Sbjct: 167 GLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFG 226
Query: 270 -----------------------ELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFESSQ 305
N++ V + +S ++ Y K G ++ A E+FE
Sbjct: 227 LVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIP 286
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E+++F+W M+ G R +L+ +S M ++ + P+ V I+ L C + ++E R+
Sbjct: 287 ERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQ 346
Query: 366 L-----------FDEMESV-----------------YGVSKE--LKHYGCMADLLGRAGL 395
FD +++ Y +S + L M + G+
Sbjct: 347 FHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGM 406
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE--HVM---KLKPEDGGVYK 450
I++A ++ MP DVF WS ++ G + E+ + A + H M K++P + +
Sbjct: 407 IDQARQIFDMMP-EKDVFSWSTMISG---YAQNELPDVALDLFHGMIDSKVEPNEITMVS 462
Query: 451 VLADVYA----NADRW------EDVVKIRRSLDAGKIKKNAGCSLI 486
V + + A RW V+ + +L A I A C I
Sbjct: 463 VFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSI 508
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 222/343 (64%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
DVF+ N ++ Y + +A+++FD + RD+VS NT+I GY GD+ AR++FD
Sbjct: 115 DVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTR 174
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RDA SW ++++ YA+ +EA++L+ M + PD I++VS LSAC+ +G L G
Sbjct: 175 DRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAE 234
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
+HR++E N++ VD L T LVD YAKCG I ++++F + K++ TW++M++GLA HGL
Sbjct: 235 VHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGL 294
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
G +L FS MI ++P+ +T +G L+ C+H GLV++ +K F M V+GV ++HYG
Sbjct: 295 GHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYG 354
Query: 385 CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
CM DLLGRAG +EEA+E+I+ M D +W LLG CRIH NVEIAE A + L P
Sbjct: 355 CMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPL 414
Query: 445 DGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
G Y +L+++YA A+ WE V ++R+++ I++ G S I+
Sbjct: 415 ADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIE 457
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 33/261 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ FS++++I A+ A+ L+ +MR + PD S +L ACS
Sbjct: 166 AREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSA 225
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + ++ +H FV ++ + V D+ L
Sbjct: 226 MGALAIGAEVHR-----------FVESNRVEV--------------------DMKLGTAL 254
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K GD+ ++ ++F MP +D ++W +++ G A +A+ LF M+ ++P+
Sbjct: 255 VDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNE 314
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
I + L AC +G + GK + V G +VD + G++ A+E+
Sbjct: 315 ITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIR 374
Query: 303 SSQEK-NLFTWNAMLVGLAMH 322
S K + W +L +H
Sbjct: 375 SMTFKPDPIIWRTLLGACRIH 395
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 287/550 (52%), Gaps = 82/550 (14%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLL---FLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
++ CK +++HQI A +T GL F++P I T + FK I
Sbjct: 18 LLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTC-----SRFKRIH----------- 61
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
+A +F+ IP P+T ++N + R + + VVLF ++ ++ P+ ++FP ++++C
Sbjct: 62 HARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCG 121
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRLRD-------- 164
+L + +H K GF + FV SL+ +Y VF + +
Sbjct: 122 KLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTA 181
Query: 165 -------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSW 211
+ LFD RDVV + LI GY+++ ++A AR+LFD+MP RD +SW
Sbjct: 182 IINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSW 241
Query: 212 GTLVAGYAQSDQCE-------------------------------EAIQLFCNMM-DLDI 239
++ GYA + + E E ++ F M+ + +
Sbjct: 242 NAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHV 301
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P++ LV+ LSAC+RLG L+ GK +H Y E + + F+ L+D YAKCG I A+
Sbjct: 302 IPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVV 361
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F K++ +WN ++ GLA+HG +L F RM +PDGVT +G L C+H GL
Sbjct: 362 VFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGL 421
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V + F M Y + +++HYGCM DLLGRAGL+++AL I+KMP+ D +W+ LL
Sbjct: 422 VKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALL 481
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CR++ NVEIAE A + +++L+P + + +++++Y + R EDV +++ ++ +K
Sbjct: 482 GACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRK 541
Query: 480 NAGCSLIQLN 489
GCS+I+ N
Sbjct: 542 LPGCSVIECN 551
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 243/423 (57%), Gaps = 2/423 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F IP FS+ +I A++L+S MR + P+ LL AC Q
Sbjct: 449 ARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQ 508
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S + HS ++K GF+C F+ +++ Y R+ A + + S N +
Sbjct: 509 SVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVM 568
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ K G + ARQ+FD MP +D SW T+++GYAQ++ + A+ LF M+D ++P+
Sbjct: 569 IVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNE 628
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I +VS SA A LG+L +G+ H Y+ I ++ LS ++D YAKCG I+TA+++F
Sbjct: 629 ITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQ 688
Query: 304 SQEKN--LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
++K + WNA++ GLAMHG LSL FS + IK + +T LG L C HAGLV+
Sbjct: 689 IKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVE 748
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ F M++ +GV +KHYGC+ DLLGR G + EA E+++ MPM DV +W LL
Sbjct: 749 VGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAS 808
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
R HG VEI E AAE++ +L+P G +L+++YA+A WED +RR++ + ++ ++
Sbjct: 809 SRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSP 868
Query: 482 GCS 484
G S
Sbjct: 869 GYS 871
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 200/404 (49%), Gaps = 35/404 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F +P SY T+I A+ +F MR+ + P+ + ++ A
Sbjct: 314 LENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSA 373
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS + + +H+ V+KL F V + +L+H+YCVF L+D + LF+E+ R+ VS
Sbjct: 374 CSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSW 433
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ GYVK+G + AR+LF+R+P RD SW ++ G+ Q + +A+ L+ M D+
Sbjct: 434 NVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLH 493
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--------- 291
P+ + +V LSAC + +E+G+ H I N F+ ++ FYA C
Sbjct: 494 PNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQ 553
Query: 292 ----------------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
G I+ A +IF+ EK++F+W+ M+ G A + L ++L
Sbjct: 554 YQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVAL 613
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMAD 388
F MI+++++P+ +T++ + G + E R + + V ++ L + D
Sbjct: 614 DLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLS--AAIID 671
Query: 389 LLGRAGLIEEALEMIKKMP-MGGDVFVWSGLLGGCRIHGNVEIA 431
+ + G I+ AL++ +++ V W+ ++ G +HG+ ++
Sbjct: 672 MYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLS 715
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 201/445 (45%), Gaps = 80/445 (17%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ C+ + S Q IH+ VLK GF + F+LNSL+++Y L A+ LFD D
Sbjct: 239 LKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDS 298
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VSCN ++ GYVK L +ARQLF +MP R VS+ T++ G AQ+D EAI++F +M
Sbjct: 299 VSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSA 358
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYI---------------------------- 269
+ P+ + + S +SAC+ +G + + +H +
Sbjct: 359 GVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDT 418
Query: 270 --ELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
N++ V + +S ++ Y K G ++ A E+FE E+++F+W M+ G R
Sbjct: 419 KRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLR 478
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL-----------FDEME---- 371
+L+ +S M ++ + P+ V I+ L C + ++E R+ FD ++
Sbjct: 479 KALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATII 538
Query: 372 SVYGVSKE---------------LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
S Y + L M + G+I++A ++ MP DVF WS
Sbjct: 539 SFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP-EKDVFSWS 597
Query: 417 GLLGGCRIHGNVEIAEAAAE--HVM---KLKPEDGGVYKVLADVYA----NADRW----- 462
++ G + E+ + A + H M K++P + + V + + A RW
Sbjct: 598 TMISG---YAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYV 654
Query: 463 -EDVVKIRRSLDAGKIKKNAGCSLI 486
V+ + +L A I A C I
Sbjct: 655 CNKVIPLNDNLSAAIIDMYAKCGSI 679
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 96/244 (39%), Gaps = 72/244 (29%)
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+++VSAL CA + G+ IH + ++F+ L++ Y KCG +++A +F+S
Sbjct: 233 LSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDS 292
Query: 304 SQ-------------------------------EKNLFTWNAMLVGLAMHGLGRLSLVYF 332
E+ ++ M++GLA + ++ F
Sbjct: 293 CSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVF 352
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLV-------------------------------- 360
M A + P+ VT+ + CSH G +
Sbjct: 353 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVF 412
Query: 361 ---DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
+ ++LF+EM VS + M ++GL+++A E+ +++P DVF W+
Sbjct: 413 SSLKDTKRLFNEMPVRNTVS-----WNVMLKGYVKSGLVDQARELFERIP-ERDVFSWAI 466
Query: 418 LLGG 421
++ G
Sbjct: 467 MIDG 470
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 229/396 (57%), Gaps = 33/396 (8%)
Query: 94 NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLM 153
N + ++S+M S+ P+ +++P L+RAC + + IH+ VLK GF D F LN+L+
Sbjct: 77 NCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLI 136
Query: 154 HVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRD--AVSW 211
H+Y F L AR++FD MP RD +VSW
Sbjct: 137 HMYVNFQ-------------------------------SLEQARRVFDNMPQRDRNSVSW 165
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
++A Y QS++ EA LF M ++ D S LSAC LG LEQGK IH YIE
Sbjct: 166 NAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK 225
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
+ I +DS L+T ++D Y KCG + A E+F +K + +WN M+ GLAMHG G ++
Sbjct: 226 SGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIEL 285
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M + PDG+T + L C+H+GLV+E + F M V G+ ++H+GCM DLLG
Sbjct: 286 FKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLG 345
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
RAGL+EEA ++I +MP+ D V L+G CRIHGN E+ E + V++L+P + G Y +
Sbjct: 346 RAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVL 405
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
LA++YA+A RWEDV K+R+ ++ +KK G S+I+
Sbjct: 406 LANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 441
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 151/364 (41%), Gaps = 50/364 (13%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
I++ QIHAH L G F + L +++ F+ + A +F+N+
Sbjct: 109 AIEEGKQIHAHVLKFG--FGADGFSLNNLIHMYVNFQSLEQARR-----------VFDNM 155
Query: 72 PYP--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
P ++ S+N +I A+ + A LF +MR ++ D + +L AC+ L +
Sbjct: 156 PQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 215
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ IH + K G D + +++ +YC L A E+F+E+ + + S N +I
Sbjct: 216 GKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI----- 270
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G A + E AI+LF M + PD I V+
Sbjct: 271 --------------------------GGLAMHGKGEAAIELFKEMEREMVAPDGITFVNV 304
Query: 250 LSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIE-IFESSQEK 307
LSACA G +E+GK+ +Y+ E+ ++ +VD + G + A + I E
Sbjct: 305 LSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNP 364
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA--RK 365
+ A++ +HG L ++IE G +L A + S D A RK
Sbjct: 365 DAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRK 424
Query: 366 LFDE 369
L ++
Sbjct: 425 LMND 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
+GY + I ++ M+ + P+ + AC +E+GK IH ++
Sbjct: 67 SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFES--SQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
D F L+ Y + A +F++ +++N +WNAM+ + F
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
RM + D L C+ G +++ + + +E G+ + K + D+ +
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKC 245
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G +E+A E+ ++P G + W+ ++GG +HG E A
Sbjct: 246 GCLEKASEVFNELPQKG-ISSWNCMIGGLAMHGKGEAA 282
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 280/548 (51%), Gaps = 82/548 (14%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISS-----ASSPTTDPL 61
++ C+++ +++Q+H GL+ S I P+S + P T L
Sbjct: 13 LENCRSLVELNQLH------GLMIKSS---------VIRNVIPLSRLIDFCTTCPETMNL 57
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
SYA S+F +I PS + +N++IR ++ +P A++ + +M PD+++FP++L+AC
Sbjct: 58 SYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKAC 117
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VF------------ 159
S L +H V+K GF +++V L+H+Y VF
Sbjct: 118 SGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWG 177
Query: 160 ---------HRLRDAQELFDE-----------ILYRDVVSC------------------- 180
+R DA E F E I+ +V+C
Sbjct: 178 SLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGFNVILA 237
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+LID Y K GDL AR LFD MP R VSW +++ GY+Q+ EEA+ +F +M+DL I
Sbjct: 238 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 297
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + +S + A G + G++IH Y+ D+ + LV+ YAK G +A +
Sbjct: 298 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 357
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGL 359
FE ++K+ W +++GLA HG G +L F RM E PDG+T LG L CSH GL
Sbjct: 358 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 417
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E ++ F EM ++G+ ++HYGCM D+L RAG EEA ++K MP+ +V +W LL
Sbjct: 418 VEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 477
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
GC IH N+E+ + V + + G+Y +L+++YA A RW DV IR S+ + ++ K
Sbjct: 478 NGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDK 537
Query: 480 NAGCSLIQ 487
G S ++
Sbjct: 538 VLGHSSVE 545
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/496 (34%), Positives = 272/496 (54%), Gaps = 25/496 (5%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+++C + + Q+ ++ G H T FK + + D L YA
Sbjct: 50 LEKCSNLNHLKQLQGFLISHG-------HSQTQFF----AFKLVRFCNLTLAD-LCYARY 97
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLC 125
IF+N+ P+ F Y +I A+ + P A +L+ M R +I P+ + +P +LR+C +
Sbjct: 98 IFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVL 157
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR-LRDAQELFDEILYRDVVSCNTLI 184
+ + +H+QVLK GF V +++ Y F + A+++FDE+L R VVS +I
Sbjct: 158 GSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMI 217
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM--------- 235
GY + G+ A +LF+ MP RD +W L+AG AQ+ EAI LF M+
Sbjct: 218 SGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNN 277
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
D + KP+ L SALSAC G L GK IH Y+ DSF+S L+D Y KCG +
Sbjct: 278 DRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLK 337
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR--IKPDGVTILGALVG 353
A +F+ KNL +WN+++ LA+HG ++ F+ +I +KP+ VT +G L
Sbjct: 338 VARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNA 397
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C+H GLV++ F+ M Y + +++H+GC+ DLLGRAG EEA+E+++ M + D
Sbjct: 398 CTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEV 457
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LL C+IHG ++AE + + ++++ P++GG +LA++YA +W++V K+RR L
Sbjct: 458 VWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLK 517
Query: 474 AGKIKKNAGCSLIQLN 489
K GCS I+++
Sbjct: 518 EKNAYKTPGCSWIEVD 533
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/435 (37%), Positives = 253/435 (58%), Gaps = 15/435 (3%)
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV---SIPPDFYSFPFLLR 119
YAL++F+ + P F ++R L PL +FS +R +P F F F
Sbjct: 90 YALNVFSAVSPPDPFLAAALLRFAFLTQPPLLPFRVFSHLRRAHGAELP--FLPFAFSTL 147
Query: 120 ACSQLCSHSLAQTIHS---QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
A S S SL + VL GF FV NSL+ Y + A+++FDE++ +D
Sbjct: 148 AKSATASRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKD 207
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V+S +++ Y ++GD+ A ++F R P +D V+W +V GYAQ+ +A+++F M +
Sbjct: 208 VISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAE 267
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
L + D ++L A+SACA+LG L + + E + + +GLVD YAKCG I+
Sbjct: 268 LGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDE 327
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCS 355
A ++F QEKN++T+++M+ GLA HG ++ F M+ A ++P+ VT +G L CS
Sbjct: 328 ASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACS 387
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM---PMGGDV 412
HAG+V E R F +M+ YG+ HY CM DLLGRAGL++EAL++++ M P GG
Sbjct: 388 HAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGG-- 445
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
VW LLG CRIHG EIA+ AEH+ KL+PE G Y +L+++ A+A +WE+V K+R +
Sbjct: 446 -VWGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILM 504
Query: 473 DAGKIKKNAGCSLIQ 487
++KK+ SL +
Sbjct: 505 RKQRLKKDPAVSLFE 519
>gi|224136906|ref|XP_002322445.1| predicted protein [Populus trichocarpa]
gi|222869441|gb|EEF06572.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 244/446 (54%), Gaps = 41/446 (9%)
Query: 84 RAHTLFSSPLN----AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
RA F+ N A SQM P ++FP +L++C++ + + +H + K
Sbjct: 46 RAAEFFAKGPNFADYACDFLSQMED-GFLPYMFTFPAVLKSCAKFMAVDEGRQVHGVIAK 104
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS-------------------- 179
+ F+CD++V NSL+H Y V L DA +FDE+L RD VS
Sbjct: 105 MDFVCDIYVENSLVHFYSVCGSLDDASRVFDEMLVRDAVSWTGVIYPGIKGYLILGKGIH 164
Query: 180 --------------CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE 225
N L+D YVK L +Q+FD +P +D VSW +++ G Q +
Sbjct: 165 GLIIERGFGLGLEVSNALMDMYVKCESLPEEKQVFDELPEKDIVSWTSIICGMVQCKFPK 224
Query: 226 EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
E ++LFC++ I+PD I L S LSA A G L+ G+ + YI+ I+ D + T +V
Sbjct: 225 EVLELFCDVQSSGIEPDGIILTSVLSARASPGALDYGRLVREYIDHKAIKWDIQIGTAVV 284
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
D YAKCG I A++IF KN+ TWNAML GLAMHG G+ +L F M+ ++P+ V
Sbjct: 285 DMYAKCGCIEMAMQIFNVMPHKNVLTWNAMLNGLAMHGHGQKALQLFEEMVREGMRPNEV 344
Query: 346 TILGALVGCSHAGLVDEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
T L L C H G V E R+ F M+S Y + L+HYGCM DLL RAGL++EALE+ K
Sbjct: 345 TFLVTLTACCHCGFVGEGRRYFHWMKSQQYNLPPRLEHYGCMVDLLCRAGLLDEALELTK 404
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
MPM DV + LL C+ +GNVE+ + +++ D GVY +L+++ A RW D
Sbjct: 405 AMPMLPDVRIMGALLSTCKANGNVELPREILDRLVEFDSRDSGVYVLLSNILAINQRWAD 464
Query: 465 VVKIRRSLDAGKIKKNAGCSLIQLNG 490
V +IRR + G I+K G S+I+++G
Sbjct: 465 VTRIRRLMKMG-IEKTPGSSVIEVDG 489
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 254/432 (58%), Gaps = 7/432 (1%)
Query: 64 ALSIFNNIP--YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A IFN + S++ ++ + A+VLF +M+ + D L AC
Sbjct: 221 ARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSAC 280
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD---EILYRDVV 178
S++ + + + +H +K+G V + N+L+H+Y + DA+ +FD E+L D++
Sbjct: 281 SRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELL--DLI 338
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N++I GY++ G + A LF MP +D VSW +++GYAQ + EA+ LF M
Sbjct: 339 SWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHG 398
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD ALVSA+SAC L L+ GK IH YI N+++V+ LST L+D Y KCG + A+
Sbjct: 399 VRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENAL 458
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
E+F + +EK + TWNA+++GLAM+G SL F+ M + P+ +T +G L C H G
Sbjct: 459 EVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMG 518
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV++ R F+ M + + +KHYGCM DLLGRAGL++EA E+I MPM DV W L
Sbjct: 519 LVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGAL 578
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG CR H + E+ E +++L+P+ G + +L+++YA+ W +V++IR + +
Sbjct: 579 LGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVV 638
Query: 479 KNAGCSLIQLNG 490
K GCS+I+ NG
Sbjct: 639 KTPGCSMIEANG 650
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 234/494 (47%), Gaps = 78/494 (15%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL++ ++ CK + Q+ + + GL+ T YA + SS S+ T P
Sbjct: 5 TLDSLLQSCKCPRHFKQLLSQTILTGLI---------TDPYAASRLINFSSHST-TLVPF 54
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHT-LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
Y+L IFN++ P+TF++NTI+RAH L +SP A++ + PD Y++P LL+
Sbjct: 55 HYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQC 114
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ S + +H+ + GF DV+V N+LM++Y V + A+ +F+E D+VS
Sbjct: 115 CAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSW 174
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFR---------------------------------D 207
NTL+ GYV+AG++ A ++F+ MP R D
Sbjct: 175 NTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERD 234
Query: 208 AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH- 266
VSW +V+ Y Q++ EEA+ LF M + D + +VSALSAC+R+ +E G+ +H
Sbjct: 235 MVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHG 294
Query: 267 --------RYIELNQIRVDSFLSTG-----------------------LVDFYAKCGYIN 295
Y+ L + + S G ++ Y +CG I
Sbjct: 295 LAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQ 354
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A +F S EK++ +W+AM+ G A H +L F M ++PD ++ A+ C+
Sbjct: 355 DAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACT 414
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H +D + + + S + + + D+ + G +E ALE+ M G V W
Sbjct: 415 HLATLDLGKWIHAYI-SRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKG-VSTW 472
Query: 416 SGLLGGCRIHGNVE 429
+ ++ G ++G+VE
Sbjct: 473 NAVILGLAMNGSVE 486
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 253/428 (59%), Gaps = 5/428 (1%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLC 125
+F +P S+N +I + AV ++ +M+ S P+ + L AC+ L
Sbjct: 165 VFEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLR 224
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ L + IH + + + + N+L+ +YC + A+E+FD ++ ++V +++
Sbjct: 225 NLELGKEIHDYIANELDLTPI-MGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVT 283
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GYV G L AR LF+R P RD V W ++ GY Q + E+AI LF M ++PD
Sbjct: 284 GYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFI 343
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ L+ CA+LG LEQGK IH YI+ N+I++D+ +ST L++ YAKCG I ++EIF +
Sbjct: 344 VVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLK 403
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+ + +W +++ GLAM+G +L F M +KPD +T + L C HAGLV+E RK
Sbjct: 404 DMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRK 463
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD---VFVWSGLLGGC 422
LF M S+Y + L+HYGC DLLGRAGL++EA E++KK+P + V ++ LL C
Sbjct: 464 LFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSAC 523
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R +GN+++ E A + K+K D ++ +LA +YA+ADRWEDV K+R + IKK G
Sbjct: 524 RTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPG 583
Query: 483 CSLIQLNG 490
S I+++G
Sbjct: 584 YSAIEVDG 591
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 217/494 (43%), Gaps = 95/494 (19%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
T + +K CK++ Q+ QI AH GL IL + F SS
Sbjct: 10 TYISLLKSCKSMSQLKQIQAHIFCFGL------QQDRDILNKLMAFSMDSSLGD-----F 58
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+YA IFN+I +PS F YN +I+A S +A+ LF Q+R + PD Y++P++L+
Sbjct: 59 NYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGI 118
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + IH+ V+K G D +V NSLM +Y + ++F+E+ RD VS N
Sbjct: 119 GCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWN 178
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+I GYV+ A ++ RM M+ + KP
Sbjct: 179 IMISGYVRCKRFEEAVDVYRRM------------------------------QMESNEKP 208
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ +VS LSACA L LE GK IH YI N++ + + L+D Y KCG ++ A EIF
Sbjct: 209 NEATVVSTLSACAVLRNLELGKEIHDYIA-NELDLTPIMGNALLDMYCKCGCVSVAREIF 267
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR-----------MIEARIK--------- 341
++ KN+ W +M+ G + G + F R MI ++
Sbjct: 268 DAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIA 327
Query: 342 -----------PDGVTILGALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHY 383
PD ++ L GC+ G +++ + + + +M++V +
Sbjct: 328 LFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTA------ 381
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN----VEIAEAAAEHVM 439
+ ++ + G IE++LE+ + D W+ ++ G ++G +E+ EA
Sbjct: 382 --LIEMYAKCGCIEKSLEIFNGLK-DMDTTSWTSIICGLAMNGKTSEALELFEAM--QTC 436
Query: 440 KLKPEDGGVYKVLA 453
LKP+D VL+
Sbjct: 437 GLKPDDITFVAVLS 450
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 252/473 (53%), Gaps = 66/473 (13%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
NT++RA+ L S P A+ +F M D +++ FL++A + + + H+ V K
Sbjct: 176 NTLLRAYALNSLPHAALAVFVDMPLRQR--DTFTYSFLIKALAT-AGVTPVRAAHTHVFK 232
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT----------------- 182
LG + D FV N+L+ Y L DA+++FDE+ RDVVS NT
Sbjct: 233 LGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSM 292
Query: 183 --------------LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY---------- 218
++DGY KAG+ A +LF RMP R+ VSW T+V+ Y
Sbjct: 293 FDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMAR 352
Query: 219 ---------------------AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
AQ EA +LF M + I+ D +A+VS L+ACA G
Sbjct: 353 VIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESG 412
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS-QEKNLFTWNAML 316
L GK IHR++ ++ + + L+D + KCG +N A IF++ EK+ +WN ++
Sbjct: 413 CLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIII 472
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
G AMHG G +L F++M + PD VT++ L C+H GLV+E R+ F ME+ YG+
Sbjct: 473 GGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGI 532
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
E++HYGCM DLLGR GLI+EA++MIK MP + +W LL CR+H NVE AE AA
Sbjct: 533 KPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELAAN 592
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ L+P + G Y VL+++YA A +W D+ K R + +K AG S I+L+
Sbjct: 593 ELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELD 645
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 275/540 (50%), Gaps = 82/540 (15%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISS-----ASSPTTDPL 61
++ C+++ +++Q+H GL+ S I P+S + P T L
Sbjct: 12 LENCRSMVELNQLH------GLMIKSS---------VIRNVIPLSRLIDFCTTCPETMNL 56
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
SYA S+F +I PS + +N++IR ++ +P A++ + +M PD+++FP++L+AC
Sbjct: 57 SYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKAC 116
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VF------------ 159
S L +H V+K GF +++V L+H+Y VF
Sbjct: 117 SGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLNVVAWG 176
Query: 160 ---------HRLRDAQELFDE-----------ILYRDVVSC------------------- 180
+R DA E F E I+ +V+C
Sbjct: 177 SLISGFVNNNRFSDAIEAFREMQSIGVKPNETIMVDLLVACGRCFDPYCQSKFEFNVILA 236
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+LID Y K GD+ AR LFD MP R+ VSW +++ GY+Q+ EEA+ +F +M+DL I
Sbjct: 237 TSLIDMYAKCGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDMLDLGIA 296
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + S + A G + G+ IH Y+ D+ + LV+ YAK G +A ++
Sbjct: 297 PDKVTFFSVIRASMIQGCSQLGQTIHAYVSKTGFVKDAAIVCALVNMYAKTGNAESAKKM 356
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGL 359
FE ++K+ W +++GLA HG G +L F RM E PDG+T LG L CSH GL
Sbjct: 357 FEDLEKKDTIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLYACSHIGL 416
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E ++ F EM +YG+ ++HYGCM D+L RAG EEA ++K MP+ +W LL
Sbjct: 417 VEEGQRYFAEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQPTANIWGALL 476
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
GC IH N+++A+ V + + G+Y +L+++YA A RW DV IR S+ + ++ K
Sbjct: 477 NGCEIHENLDLADRIRSMVSESEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDK 536
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/413 (37%), Positives = 249/413 (60%), Gaps = 4/413 (0%)
Query: 82 IIRAHTLF-SSPLNAVVLF-SQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
+I+AH + +S N++ +F S +R P+ Y+F F+ +AC + I +K
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 60
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
+G ++FV N+++ +Y + + +A+ +FD L +D+ S N +I GYV +G++ A+++
Sbjct: 61 IGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEM 120
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
FD M RD VSW T++AGY Q +EA+ LF M+ P+ L SAL+ACA L L
Sbjct: 121 FDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVAL 180
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF--ESSQEKNLFTWNAMLV 317
+QG+ IH YI+ ++I+++ L L+D YAKCG I+ A ++F E + ++ WNAM+
Sbjct: 181 DQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIG 240
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
G AMHG + ++ F +M ++ P+ VT + L CSH LV+E R F M S YG+
Sbjct: 241 GYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIE 300
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
E++HYGCM DLLGR+GL++EA E + MPM D +W LLG CRIH ++E + +
Sbjct: 301 PEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKI 360
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ +L + G + +LA++Y+ + +W++ +R+ ++ KK GCS I+LNG
Sbjct: 361 IKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNG 413
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 105/266 (39%), Gaps = 35/266 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ + S+ TII + A+ LF +M PP+ ++ L A
Sbjct: 114 IGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAA 173
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + I HVY ++ + L
Sbjct: 174 CANLVALDQGRWI--------------------HVYIDKSEIKMNERLL----------- 202
Query: 181 NTLIDGYVKAGDLAHARQLF-DRMPFRDAV-SWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+L+D Y K G++ A ++F D + V W ++ GYA + +EAI LF M
Sbjct: 203 ASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEK 262
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTA 297
+ P+ + V+ L+AC+ +E+G+ + + + G +VD + G + A
Sbjct: 263 VSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEA 322
Query: 298 IE-IFESSQEKNLFTWNAMLVGLAMH 322
E +F + W A+L +H
Sbjct: 323 EETVFNMPMAPDATIWGALLGACRIH 348
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 274/485 (56%), Gaps = 16/485 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I + +++ ++ QIHA L LL +L L+ + + + ++L
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHR----------AYASHGKIRHSL 84
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
++F+ P F + I ++ A +L+ Q+ + I P+ ++F LL++CS
Sbjct: 85 ALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS 144
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH+ VLK G D +V L+ VY + AQ++FD + R +VS +I
Sbjct: 145 ----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNI 244
Y K G++ AR LFD M RD VSW ++ GYAQ +A+ LF ++ + KPD I
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ALSAC+++G LE G+ IH +++ ++IR++ + TGL+D Y+KCG + A+ +F +
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDEA 363
K++ WNAM+ G AMHG + +L F+ M ++P +T +G L C+HAGLV+E
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++F+ M YG+ +++HYGC+ LLGRAG ++ A E IK M M D +WS +LG C+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+HG+ + + AE+++ L ++ G+Y +L+++YA+ +E V K+R + I K G
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 484 SLIQL 488
S I++
Sbjct: 501 STIEI 505
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 246/426 (57%), Gaps = 1/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+NT++ AH A+ +S+ R + I + +SF +L C +
Sbjct: 145 ARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVK 204
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L L + +H Q+L GF+ +V + +S++ Y + DA++LFDE+ RDV++ T+
Sbjct: 205 LKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTM 264
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY K GD+ A +LF MP ++ VSW L++GYA++ +A++LF MM ++PD
Sbjct: 265 VSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQ 324
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S L ACA + L+ GK IH Y+ + ++ + + L+D Y+KCG + ++F+
Sbjct: 325 FTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDL 384
Query: 304 SQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K ++ WN ++ LA HG G ++ M+ + KPD +T + L CSH+GLV +
Sbjct: 385 MGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQ 444
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
F+ M YG+ +HY C+ DLLGRAG EE ++ ++KMP D VW+ LLG C
Sbjct: 445 GLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVC 504
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIHG++E+ AAE +++L+P+ Y +L+ +YA RWE V K+R+ ++ ++KK
Sbjct: 505 RIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERA 564
Query: 483 CSLIQL 488
S +++
Sbjct: 565 ISWLEI 570
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 145/317 (45%), Gaps = 32/317 (10%)
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
F+ N L+++Y + +A+++FD++ R++ S N ++ GY K G + AR+LFD+MP
Sbjct: 95 TFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPE 154
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
+D VSW T+V +AQ +EA++ + L I+ + + L+ C +L E+ + +
Sbjct: 155 KDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQV 214
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGY-------------------------------I 294
H I + + LS+ ++D Y KCG +
Sbjct: 215 HGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDM 274
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+A E+F EKN +W A++ G A +G+G +L F++M+ ++PD T L C
Sbjct: 275 KSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCAC 334
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ + +++ + + + D+ + G + ++ M DV +
Sbjct: 335 ASIASLKHGKQIHAYLLRI-NFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVL 393
Query: 415 WSGLLGGCRIHGNVEIA 431
W+ ++ HG E A
Sbjct: 394 WNTIISALAQHGCGEEA 410
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 40/247 (16%)
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI-RVDS 278
+ ++ EA+ N+ ++ D+ L S L CA L +GK +H +++L + R +
Sbjct: 36 KKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGT 95
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
FLS L++ YAKCG A ++F+ +NL++WN ML G A G+ + + F +M E
Sbjct: 96 FLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEK 155
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEMES------------VYGVSKELKHYGCM 386
D V+ ++ + G DEA + + E V V +LK G
Sbjct: 156 ----DVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLT 211
Query: 387 ADLLG----------------------RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ G + GL+ +A ++ +M DV W+ ++ G
Sbjct: 212 RQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMS-ARDVLAWTTMVSGYAK 270
Query: 425 HGNVEIA 431
G+++ A
Sbjct: 271 WGDMKSA 277
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 261/457 (57%), Gaps = 13/457 (2%)
Query: 14 KQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
K+ Q+H H + G FL + +++Y L+ A S+FN +
Sbjct: 957 KEGEQMHNHVIKLG--FLLDIFVSNSLIYLYAA-----------CGALACARSVFNEMLV 1003
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
S+N++I ++ + + LF M+ + D + ++ AC+ L S+A +
Sbjct: 1004 KDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCM 1063
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
+ DV++ N+L+ YC +L+ A+++F ++ ++ V+ N +I Y K G+L
Sbjct: 1064 VRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNL 1123
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A+++FD++P +D +SW +++ Y+Q+ ++++LF M +KPD + + S LSAC
Sbjct: 1124 VSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSAC 1183
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A LG L+ GK IH Y+ N I+ D+ + L+D +AKCG + A+++F +EK+ +WN
Sbjct: 1184 AHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWN 1243
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
++++GLA +G +L F M+ +P+ VT LG L+ C++ LV+E F+ M+SV
Sbjct: 1244 SIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSV 1303
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+ + ++KHYGC+ D+L RAG +E+A+ I +MP+ D VW LLG CR HGNV +AE
Sbjct: 1304 HNLEPQMKHYGCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVAVAEM 1363
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR 470
A + + +L P + +L+++YA+ADRW D + +RR
Sbjct: 1364 ATKKLSELDPGNSADSMLLSNIYASADRWSDAMNVRR 1400
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 248/436 (56%), Gaps = 6/436 (1%)
Query: 45 TTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT 104
++ P+ + + +T P AL +F+ P P + ++A++ PL A+ LF R
Sbjct: 418 SSTAPVPATARSSTPPSRTALKVFDQSPAP----WRAFLKAYSHGPFPLEALHLFKHARQ 473
Query: 105 VSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRD 164
+ D + F F+L+AC+ L H +H+ V++ GF +V +L++VY + L +
Sbjct: 474 -HLADDTFVFTFVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVE 532
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A+++FDE+ ++VVS N +I G+ G++ +AR LFD+MP R+ VSW L+ GY ++
Sbjct: 533 ARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLY 592
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
EA+ L +MM I P I +++ + A + LG + G+ ++ Y E I D+ + L
Sbjct: 593 AEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSL 652
Query: 285 VDFYAKCGYINTAIEIF-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+D YAK G + ++++F E +NL +W +++ G AMHGL +L F+ M A IKP+
Sbjct: 653 IDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPN 712
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
+T L + CSH GLV++ F M Y + E+KH+GC+ D+LGRAG + EA ++I
Sbjct: 713 RITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQII 772
Query: 404 KKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWE 463
+ +PM +V VW LLG C +G V + E A + + L+ E GG + VL++V R+
Sbjct: 773 EGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFS 832
Query: 464 DVVKIRRSLDAGKIKK 479
D + R+ LD KI K
Sbjct: 833 DAEQARKLLDQRKIVK 848
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 206/445 (46%), Gaps = 76/445 (17%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++ + ++HAH + GL LYA+ +S A +F I
Sbjct: 854 MEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVS------------AHKVFKQIE 901
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P+TF +NT++R +P +A+V + + + + PD +FPF+L+AC++ C+ +
Sbjct: 902 SPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQ 961
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H+ V+KLGF+ D+FV NSL+++Y L A+ +F+E+L +DVVS N+LI
Sbjct: 962 MHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLI-------- 1013
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
GY+Q ++ +E + LF M +++ D + +V +SA
Sbjct: 1014 -----------------------GGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISA 1050
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
C LG+ + RYIE N I VD +L L+D+Y + G + +A ++F ++KN T
Sbjct: 1051 CTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTL 1110
Query: 313 NAMLVGLAMHG-----------LGRLSLVYFSRMI--------------------EARIK 341
NAM+ A G + L+ +S MI A++K
Sbjct: 1111 NAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVK 1170
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
PD V I L C+H G +D + + D + + + + D+ + G ++EAL+
Sbjct: 1171 PDAVVIASVLSACAHLGALDLGKWIHDYVRR-NNIKADTIMENSLIDMFAKCGCVQEALQ 1229
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHG 426
+ M D W+ ++ G +G
Sbjct: 1230 VFTDMEE-KDTLSWNSIILGLANNG 1253
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 279/483 (57%), Gaps = 19/483 (3%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
T+KQ QIHAH + L S +I + IL A+SP D YA ++F ++
Sbjct: 36 TMKQTKQIHAHAIANNLTRFS--YISSRILAFF--------AASPRGD-FRYAETLFTHM 84
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P P+ F YN+II ++T S ++ +F++M ++I P+ ++F L+++C L S +
Sbjct: 85 PNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSS---LE 141
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+ + +K G DV+ ++S+++V+ + A+++FDE R+VV +L+ GY G
Sbjct: 142 QVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCG 201
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-----IKPDNIAL 246
+ R +FD+MP R+ S +V+GY ++ E +QLF + D +K + L
Sbjct: 202 LVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALL 261
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS L+AC +G E+GK IH Y+E N + D L T L+DFYAKCG++ A ++F+
Sbjct: 262 VSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLV 321
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K++ TW+AM++GLA++G +++L F +M + KP+ VT +G L C+H L E+ +L
Sbjct: 322 KDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRL 381
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M Y ++ ++HYGC+ D+L R+G +++AL I M + D +W LL GC +HG
Sbjct: 382 FGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHG 441
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+ E+ + +++++ PE G Y +LA++YAN +WE V ++R+ + + G S I
Sbjct: 442 HYELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSFI 501
Query: 487 QLN 489
+++
Sbjct: 502 EID 504
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 257/425 (60%), Gaps = 1/425 (0%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+ + P S+ ++I A++ + AV F M + I PD + +L AC++L
Sbjct: 195 LLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKD 254
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVSCNTLID 185
L +++H V + G ++ +L+ +Y AQ++FD + S N +ID
Sbjct: 255 LELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIID 314
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY K G + AR LFD M RD +++ +++ GY S Q EA+ LF +M D++ DN
Sbjct: 315 GYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFT 374
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ L+ACA LG L+QG+ +H IE + D +L T L+D Y KCG ++ A +F+
Sbjct: 375 VVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMG 434
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++++ TW AM+ GLA +G+G+ +L +F +M +P+ V+ + L CSH+ L++E R
Sbjct: 435 KRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRL 494
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
FDEM +Y + +++HYGCM DLLGR+GL++EA++++K MP+ + +W+ +L CR+H
Sbjct: 495 YFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVH 554
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
++++A+ AAEH++KL+P++ GVY L ++Y ++ +WE+ KIR ++ ++KK AG S
Sbjct: 555 KHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSS 614
Query: 486 IQLNG 490
I + G
Sbjct: 615 ITVAG 619
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 228/472 (48%), Gaps = 56/472 (11%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPC---HILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+T++Q ++HA T G L L P H+L +++ + P L YAL +
Sbjct: 10 RTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCL----------EPHPLHLRYALHL 59
Query: 68 FNNIPYPSTFSYNTIIRAHTLF-SSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC- 125
F+ +P PSTF ++T +RA + S P +LF +MR + PD ++F FL + S
Sbjct: 60 FDRMP-PSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSR 118
Query: 126 SHSL--AQTIHSQVLKLGFICDV-FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
HSL +H+ L+ FV NSL+H+Y DA+ FDEI +D V+
Sbjct: 119 PHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTM 178
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LI G K G L + L + P RD +SW +L+A Y+++++ EA+ F M+ I PD
Sbjct: 179 LISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPD 238
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC----------- 291
+ +++ LSACA+L +LE G+++H +E + L L+D YAKC
Sbjct: 239 EVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFD 298
Query: 292 ---------------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
G+++ A +F+ + +++ T+N+M+ G G R +L+
Sbjct: 299 ALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALL 358
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M ++ D T++ L C+ G + + R L +E V ++ + D+
Sbjct: 359 LFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL-VEADIYLGTALLDMY 417
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
+ G ++EA + ++M DV W+ ++ G +G + +AA EH +++
Sbjct: 418 MKCGRVDEATIVFQRMG-KRDVHTWTAMIAGLAFNG---MGKAALEHFYQMR 465
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 235/420 (55%), Gaps = 32/420 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YAL +F I P F +NT+IR P A + +M+ D +++ FL++
Sbjct: 1 MDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKV 60
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C QL S L + IH VLK G VFV N+L+H+Y +F
Sbjct: 61 CGQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFK-------------------- 100
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
D+ A LF+ MP V+W T++ + +EAI+LF M+ +K
Sbjct: 101 -----------DIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLK 149
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD+ V LSACA LGEL+ G+ +H I+ + +S L+D YAKCG + A EI
Sbjct: 150 PDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEI 209
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI-KPDGVTILGALVGCSHAGL 359
F + +N+ +WN M++GLAMHG G +L FS+M+E ++ P+ VT LG L CSH G+
Sbjct: 210 FNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGM 269
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E R+ FD M Y + +KHYG M D+LGRAGL+EEA +IK MP+ + VW LL
Sbjct: 270 VEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLL 329
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+HGN+E+AE + +++L+P+ Y +LA++YA+A +W VV++R+S+ ++K
Sbjct: 330 AACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVRVRKSMHIRGVQK 389
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 59/334 (17%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTF 77
QIH + L GL + T+++ FK I +A+ +F +P
Sbjct: 72 QIHCNVLKHGLE--EHVFVRNTLVHMYGMFKDIEAATH-----------LFEEMPKSYLV 118
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
++NTII + A+ LF +M + PD +F L AC+ L + + +HS +
Sbjct: 119 AWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCI 178
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
G V V NSL+ +Y + A E+F+++ R++VS NT+I
Sbjct: 179 DHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMI------------- 225
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI-KPDNIALVSALSACARL 256
G A +EA++LF M++ + P+ + + L AC+
Sbjct: 226 ------------------LGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHG 267
Query: 257 GELEQGKNIHRYIELNQIRVDSFLST------GLVDFYAKCGYINTAIEIFESSQ-EKNL 309
G +E+G+ RY ++ +R D + +VD + G + A + +S E N
Sbjct: 268 GMVEEGR---RYFDI--MRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNS 322
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
W +L +HG L+ +++E ++PD
Sbjct: 323 IVWRTLLAACRVHGNLELAEQVRQQLLE--LEPD 354
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 256/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA ++F+ + + ++NT+I + F A LF +M+ ++ PD ++ A
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + + + I+ +++ D +L +L+ +Y + A+E F ++ R++
Sbjct: 222 CGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++ GY K G L A+ +FD+ +D V W T+++ Y +SD +EA+++F M IK
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +++ S +SACA LG L++ K +H I +N + + ++ L++ YAKCG ++ ++
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +N+ +W++M+ L+MHG +L F+RM + ++P+ VT +G L GCSH+GLV
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E +K+F M Y ++ +L+HYGCM DL GRA L+ EALE+I+ MP+ +V +W L+
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHG +E+ + AA+ +++L+P+ G +++++YA RWEDV IRR ++ + K
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 481 AGCSLIQLNG 490
G S I NG
Sbjct: 582 KGLSRIDQNG 591
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 212/454 (46%), Gaps = 78/454 (17%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CK++ I Q+HAH L T I + + +F + + S ++ LSYAL++F+
Sbjct: 22 CKSLNHIKQLHAHILR------------TVINHKLNSF-LFNLSVSSSSINLSYALNVFS 68
Query: 70 NIPY-PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+IP P + +N +R + S P ++ + ++R V D +SF +L+A S++ +
Sbjct: 69 SIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 128
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H K+ +CD FV M +Y R+ A+ +FDE+ +RDVV+ NT+I+ Y
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+ G LV +EA +LF M D ++ PD + L +
Sbjct: 189 RFG----------------------LV---------DEAFKLFEEMKDSNVMPDEMILCN 217
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDS------------------------------ 278
+SAC R G + + I+ ++ N +R+D+
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277
Query: 279 -FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
F+ST +V Y+KCG ++ A IF+ +++K+L W M+ + +L F M
Sbjct: 278 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
+ IKPD V++ + C++ G++D+A+ + + V G+ EL + ++ + G ++
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIH-VNGLESELSINNALINMYAKCGGLD 396
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
++ +KMP +V WS ++ +HG A
Sbjct: 397 ATRDVFEKMPR-RNVVSWSSMINALSMHGEASDA 429
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 257/425 (60%), Gaps = 1/425 (0%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+ + P S+ ++I A++ + AV F M + I PD + +L AC++L
Sbjct: 195 LLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKD 254
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVSCNTLID 185
L +++H V + G ++ +L+ +Y AQ++FD + S N +ID
Sbjct: 255 LELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIID 314
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY K G + AR LFD M RD +++ +++ GY S Q EA+ LF +M D++ DN
Sbjct: 315 GYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFT 374
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ L+ACA LG L+QG+ +H IE + D +L T L+D Y KCG ++ A +F+
Sbjct: 375 VVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMG 434
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++++ TW AM+ GLA +G+G+ +L +F +M +P+ V+ + L CSH+ L++E R
Sbjct: 435 KRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRL 494
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
FDEM +Y + +++HYGCM DLLGR+GL++EA++++K MP+ + +W+ +L CR+H
Sbjct: 495 YFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVH 554
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
++++A+ AAEH++KL+P++ GVY L ++Y ++ +WE+ KIR ++ ++KK AG S
Sbjct: 555 KHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSS 614
Query: 486 IQLNG 490
I + G
Sbjct: 615 ITVAG 619
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 228/472 (48%), Gaps = 56/472 (11%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPC---HILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+T++Q ++HA T G L L P H+L +++ + P L YAL +
Sbjct: 10 RTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCL----------EPHPLHLRYALHL 59
Query: 68 FNNIPYPSTFSYNTIIRAHTLF-SSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC- 125
F+ +P PSTF ++T +RA + S P +LF +MR + PD ++F FL + S
Sbjct: 60 FDRMP-PSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSR 118
Query: 126 SHSL--AQTIHSQVLKLGFICDV-FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
HSL +H+ L+ FV NSL+H+Y DA+ FDEI +D V+
Sbjct: 119 PHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTM 178
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LI G K G L + L + P RD +SW +L+A Y+++++ EA+ F M+ I PD
Sbjct: 179 LISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPD 238
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC----------- 291
+ +++ LSACA+L +LE G+++H +E + L L+D YAKC
Sbjct: 239 EVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFD 298
Query: 292 ---------------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
G+++ A +F+ + +++ T+N+M+ G G R +L+
Sbjct: 299 ALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALL 358
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M ++ D T++ L C+ G + + R L +E V ++ + D+
Sbjct: 359 LFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL-VEADIYLGTALLDMY 417
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
+ G ++EA + ++M DV W+ ++ G +G + +AA EH +++
Sbjct: 418 MKCGRVDEATIVFQRMG-KRDVHTWTAMIAGLAFNG---MGKAALEHFYQMR 465
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 256/441 (58%), Gaps = 20/441 (4%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
SY LS+F S F+ N ++R + PL + LF ++ + +SF FLL +
Sbjct: 78 SYPLSLFRCASCASAFASNHLLR---VLPHPL-PLRLFPRLPRR----NPHSFTFLLASL 129
Query: 122 SQ-----------LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
S + S + +H+ +K G D++V N+L+H Y V + +++FD
Sbjct: 130 SNHLDADPAVAVSIASRLMGAHVHALAVKAGAAGDLYVRNALIHFYGVCGDVAAMRKVFD 189
Query: 171 EI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
E+ L RDVV+ N ++ GYV+AG + AR++FD MP RD VSW T+V GY + + E A+
Sbjct: 190 ELPLVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALG 249
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+F NM+ +K + A+V+ALSA A+LG LEQGK +H I+ + + L LVD Y+
Sbjct: 250 VFKNMVVQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVIKRAGVAMSMNLGAALVDMYS 309
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG + A E+F++ +++F WN+M+ GLA HGLG ++ F + + P +T +G
Sbjct: 310 KCGSVAAAKEVFDAMPWRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFVG 369
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L CS GLVDE R F M YG+ E++HYGCM DLL RAGL++EA+E+I+ M +
Sbjct: 370 VLNACSRTGLVDEGRWYFKLMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIP 429
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
D +W +L C+ HG V++ +++L P G Y +LA +YA A +W++V K+R
Sbjct: 430 PDPVLWGTVLSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVR 489
Query: 470 RSLDAGKIKKNAGCSLIQLNG 490
+ + K+AG SL++ +G
Sbjct: 490 KLMSNRGTSKSAGWSLMEAHG 510
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 237/425 (55%), Gaps = 1/425 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + F++ +I A+ LFS MR P D ++ AC++
Sbjct: 219 ARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACAR 278
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + H + G + V N+L+H+Y F + A+ LFD D S N++
Sbjct: 279 LEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSM 338
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY+K G + A++LF MP +D VSW T+++G Q+DQ EA+ +F NM IKPD
Sbjct: 339 IAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDE 398
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ LVS +SAC + LEQGK++H YI +Q + L T L+D Y KCG + +A+E+F++
Sbjct: 399 VTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDT 458
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI-KPDGVTILGALVGCSHAGLVDE 362
+E+ WNA++VGLAM+GL SL FS M + P+ +T G L C HAGLV+E
Sbjct: 459 MEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEE 518
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ F M+ Y + ++HYGCM DLLGRAG ++EA +I+ MPM DV W LLG C
Sbjct: 519 GQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSC 578
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
HG+ E+ E ++ L P G + +L+++YA+ W+ V +R S+ + K G
Sbjct: 579 WKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPG 638
Query: 483 CSLIQ 487
S+++
Sbjct: 639 SSVVE 643
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 211/489 (43%), Gaps = 78/489 (15%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L+ + RC + + + QIHA F+ GLL + + T P+ P
Sbjct: 7 LDAHLARCSSARHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPL---------PFH 57
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
++L + + + P+ FS N +++A P + L++ M S PD Y+ L AC+
Sbjct: 58 HSLRLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACA 114
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + +H ++ GF ++++ N+LM +Y L DA+++FD D VS NT
Sbjct: 115 TRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNT 174
Query: 183 LIDGYVKAGDLAHARQLFDRMPFR-------------------------------DAVSW 211
++ YV+A D+ A +F RMP R D +W
Sbjct: 175 ILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTW 234
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL-----GELEQG---- 262
+++ + ++ + EA+ LF +M D +V ++ACARL GE+ G
Sbjct: 235 TAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFR 294
Query: 263 ---------KN--IHRYIE-LNQIR----------VDSFLSTGLVDFYAKCGYINTAIEI 300
+N IH Y LN + +D F ++ Y K G + A E+
Sbjct: 295 AGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKEL 354
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +K+ +W M+ G + +L F+ M IKPD VT++ + C++ +
Sbjct: 355 FTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSL 414
Query: 361 DEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
++ + + + + E Y ++ L + D+ + G +E ALE+ M G W+ ++
Sbjct: 415 EQGKSMHEYIREHQYTITVILG--TSLIDMYMKCGCLESALEVFDTMEERGTP-CWNAVI 471
Query: 420 GGCRIHGNV 428
G ++G V
Sbjct: 472 VGLAMNGLV 480
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 286/558 (51%), Gaps = 83/558 (14%)
Query: 5 NFIK-RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+F+K C +I + Q HA L H+L L+ + K IS + + L+Y
Sbjct: 15 DFLKTHCTSISKTKQAHALLLRT--------HLLHNPLF---SSKLISFLALSHSGDLNY 63
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F + P F NT+IR + +P AV L+ M +P D Y++PF+L AC++
Sbjct: 64 ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACAR 123
Query: 124 LCSHSLAQTIHSQVLK----------------------LGFICDVF---------VLNSL 152
L + L + H +VLK G CDVF N +
Sbjct: 124 LGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIM 183
Query: 153 MHVYCVFHRLRDAQELFDEILYRD------------VVSC-------------------- 180
++ + A +L DE+ D V +C
Sbjct: 184 INAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELG 243
Query: 181 --------NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
N ++D Y K D+ A+++F+R+ +D +SW ++++G A+S +EA+ LF
Sbjct: 244 LDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQ 303
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M I+ D I LV LSACA+ G L+QGK IH I+ +I D L T LVD YAKCG
Sbjct: 304 KMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCG 363
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
I+ A+++F + +N+FTWNA++ GLAMHG G ++ F +M ++ PD VT + L
Sbjct: 364 SIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLC 423
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
CSHAGLVDE +F M++ + + ++HYGC+ DLL RA +++AL I+ MP+ +
Sbjct: 424 ACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANS 483
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
+W+ LLG CR G+ ++AE V++L+P+ G Y +L+++YA +W+ +K+R+ +
Sbjct: 484 VLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQM 543
Query: 473 DAGKIKKNAGCSLIQLNG 490
I+K GCS I+LNG
Sbjct: 544 KNKGIEKTPGCSWIELNG 561
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 273/502 (54%), Gaps = 66/502 (13%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+++CKT+ + Q+HAH +T GL+F + Y ++ ISS T ++A
Sbjct: 14 QLLEKCKTLDTLKQVHAHMITTGLIFHT---------YPLSRILLISS-----TIVFTHA 59
Query: 65 LSIFNNIPYPSTFSYNTII------RAHTLFSSPLNAVVLFSQMRT-VSIPPDFYSFPFL 117
LSIFN+IP P+ F YNT+I + HT A L+S++ T ++ P+ ++FP L
Sbjct: 60 LSIFNHIPNPTIFLYNTLISSLANIKPHTHI-----AFSLYSRVLTHTTLKPNGFTFPSL 114
Query: 118 LRACSQLCSHSLAQTIHSQVLK-LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+AC + +H+ VLK L CD FV +L+
Sbjct: 115 FKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALL----------------------- 151
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQ--CE------EAI 228
+ Y K G + R LF+++ D SW ++++ Y + CE E +
Sbjct: 152 --------NYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVL 203
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
LF M IK + + LV+ +SACA LG L QG H Y+ + ++++ F+ T L+D Y
Sbjct: 204 TLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMY 263
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+KCG ++ A ++F+ ++ +NAM+ G A+HG G +L F +M + PD VT++
Sbjct: 264 SKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLV 323
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
+ CSH GLV+E +F+ M+ VYGV +L+HYGC+ DLLGRAG + EA E + MPM
Sbjct: 324 VTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPM 383
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
+ +W LLG R+HGN+EI E +H+++L+PE G Y +L+++YA+ +RW+DV ++
Sbjct: 384 KPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRV 443
Query: 469 RRSLDAGKIKKNAGCSLIQLNG 490
R+ + I K G SL+++ G
Sbjct: 444 RKLMKDHGINKVPGSSLVEVGG 465
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 259/480 (53%), Gaps = 20/480 (4%)
Query: 19 IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFS 78
IH L GLL + H+ T +L A SP +A +F+ +P
Sbjct: 31 IHCLLLKAGLLHVG-AHLPTALLSAYAAL------GSP-----DHARRLFDEMPEQGLVP 78
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC----SQLCSHSLAQTIH 134
+ RAH A+ +F M + PD + L AC S + + IH
Sbjct: 79 RTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIH 138
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+ V+ G + DVFV L+ VY L ++ +FD++ R ++ N ++ Y + G +
Sbjct: 139 ALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVD 198
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---IKPDNIALVSALS 251
A ++F MP RD VSW T++AGY + +C EA+ LF M+ + P+ + + L
Sbjct: 199 TAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILG 258
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS-QEKNLF 310
ACA G LE G +H YIE N++ D +L L+D Y KCG I+ A+++FE + ++K+LF
Sbjct: 259 ACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLF 318
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W ++ GLAMHG +L F M + I PD VT++G L C+H GLVDE F M
Sbjct: 319 SWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSM 378
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
E+ + ++ +++HYGCM DLLGR G ++EA MI+ MPM + +W L C++HGN+E+
Sbjct: 379 EAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMEL 438
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ AAE + +L P+D +L+ +YA A W + + RR +++ ++KK GCS I+L G
Sbjct: 439 GKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKG 498
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 266/488 (54%), Gaps = 49/488 (10%)
Query: 5 NFIKRCKTIK-QIHQIHAHFLTKGLLFLSP---CHILTTILYAITTFKPISSASSPTTDP 60
+ ++ C + K ++ QIHA + G+ +P H++ TI+ + P
Sbjct: 22 SLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIV--------------SLSAP 67
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+SYA ++F I P+ F++NTIIR + +P A + + QM + PD +++PFLL+A
Sbjct: 68 MSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKA 127
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
S+ + + IHS ++ GF VFV NSL+H+Y +C
Sbjct: 128 ISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYA---------------------AC 166
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
GD A ++F+ M RD V+W +++ G+A + + EA+ LF M ++
Sbjct: 167 ----------GDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVE 216
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +VS LSA A LG LE G+ +H Y+ + +S ++ L+D YAKCG I A +
Sbjct: 217 PDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRV 276
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F E+N +W +++VGLA++G G +L F M + P +T +G L CSH G++
Sbjct: 277 FSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGML 336
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE + F M+ G+ ++HYGCM DLL RAGL+++A E I+ MP+ + +W LLG
Sbjct: 337 DEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLG 396
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C IHG++ + E A H++ L+P+ G Y +L+++YA+ RW DV IRRS+ +KK
Sbjct: 397 ACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKT 456
Query: 481 AGCSLIQL 488
G SL++L
Sbjct: 457 PGYSLVEL 464
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 242/412 (58%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N +I H + F M S ++ +L AC + L +H +VL
Sbjct: 129 WNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVL 188
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
+ G + D V N+L+ +Y + A LF+ + R + S ++I G V++G + AR
Sbjct: 189 ESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARD 248
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
LFD MP RD ++W ++ GY Q + +A++ F M ++ D +VS ++ACA+LG
Sbjct: 249 LFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGA 308
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
LE G+ Y+ I++D F+ L+D Y+KCG I A+++F+ ++ FTW A+++G
Sbjct: 309 LETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILG 368
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
LA++G G ++ F RM+ A PD VT +G L C+HAGLVD+ R+ F M Y +S
Sbjct: 369 LAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISP 428
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
+ HYGC+ D+LGRAG ++EAL+ I KMPM + +W LL CR++GN EI E AAE +
Sbjct: 429 TVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERL 488
Query: 439 MKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++L P++ Y +L+++YA ++RW+DV +IR+ + IKK GCS+I++NG
Sbjct: 489 LELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNG 540
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 161/411 (39%), Gaps = 77/411 (18%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR- 119
LS A S+ + IP+ + ++ + H AV + +M PD Y+FP LL+
Sbjct: 5 LSRARSLLDGIPHRRGRAASSSVSGH----GAEEAVAGYVRMLAGGARPDAYTFPSLLKA 60
Query: 120 ----ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
+ + + S+ IH+ V+K G + +SL+ +Y A+
Sbjct: 61 AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMY-------AARGDGAAARAV 113
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
+C G V W L++G+ +S + E + F +M+
Sbjct: 114 LEAACLATGGGA--------------------PVMWNALISGHNRSGRFELSCCSFVDMV 153
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ VS LSAC + +L G +H+ + + + D + LVD YA+CG ++
Sbjct: 154 RASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMD 213
Query: 296 TAIEIFESSQ-------------------------------EKNLFTWNAMLVGLAMHGL 324
A +FE Q E++ W AM+ G G
Sbjct: 214 AAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGR 273
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY----GVSKEL 380
R +L F M +++ D T++ + C+ G ++ E +Y G+ ++
Sbjct: 274 FRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETG-----EWARIYMGRLGIKMDV 328
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ D+ + G IE AL++ K M D F W+ ++ G ++G E A
Sbjct: 329 FVGNALIDMYSKCGSIERALDVFKDMH-NRDKFTWTAIILGLAVNGRGEEA 378
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 144/356 (40%), Gaps = 48/356 (13%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+++P T ++ +I + +A+ F M+ + D ++ ++ AC+Q
Sbjct: 246 ARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQ 305
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + + +LG DVFV N+ L
Sbjct: 306 LGALETGEWARIYMGRLGIKMDVFVGNA-------------------------------L 334
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G + A +F M RD +W ++ G A + + EEAI +F M+ PD
Sbjct: 335 IDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDE 394
Query: 244 IALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ V L+AC G +++G+ E I L+D + G + A++ +
Sbjct: 395 VTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTID 454
Query: 303 SSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT---ILGALVGCSHAG 358
K N W +L ++G + + R++E + PD T +L + S+
Sbjct: 455 KMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLE--LDPDNSTAYILLSNMYAKSNRW 512
Query: 359 L-VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
V R++ E G+ KE GC ++ G+I E + + PM +++
Sbjct: 513 KDVRRIRQIIMEK----GIKKEP---GC--SMIEMNGIIHEFVAADRSHPMNKEIY 559
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 251/426 (58%), Gaps = 1/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+NT++ A+ +A+ + ++R + I + YSF LL C +
Sbjct: 136 ARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVK 195
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ L++ H QVL GF+ ++ + +S++ Y + DA+ LFDE++ RDV++ T+
Sbjct: 196 VKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTM 255
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY + GD+ AR+LFD MP ++ V+W +L+AGYA+ D +A++LF MM L+I+PD
Sbjct: 256 VSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQ 315
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S L A A + L GK IH Y+ IR ++ + + L+D Y+KCG + +F+
Sbjct: 316 FTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDL 375
Query: 304 SQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+K ++ WN ++ LA HG G+ ++ F M+ +KPD +T++ L CSH+GLV E
Sbjct: 376 MGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQE 435
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+L++ + S +GV +HY C+ DLLGRAG + + ++KMP + +W+ LLG C
Sbjct: 436 GLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVC 495
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R+HGN+E AE +++L P+ Y +L+ ++A RWE V +R+ ++ ++K+
Sbjct: 496 RMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDRA 555
Query: 483 CSLIQL 488
S I++
Sbjct: 556 ISWIEI 561
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 165/366 (45%), Gaps = 35/366 (9%)
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDE 171
+ +LL+ C+ S L + +H + G + F+ N L+++Y A ++FDE
Sbjct: 52 TLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDE 111
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+ R++ S N ++ GY K G + AR+LFD+MP +D VSW T+V YA+S C +A++ +
Sbjct: 112 MSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFY 171
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
+ L I + + L+ C ++ ELE K H + + + +S+ ++D YAKC
Sbjct: 172 RELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKC 231
Query: 292 -------------------------------GYINTAIEIFESSQEKNLFTWNAMLVGLA 320
G + A E+F+ EKN W +++ G A
Sbjct: 232 SEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYA 291
Query: 321 MHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKEL 380
H LG +L F++M+ I+PD T L + ++ +++ + +
Sbjct: 292 RHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRT-NIRPNT 350
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK 440
+ D+ + G +E + M DV +W+ ++ HG + A + +++
Sbjct: 351 IVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVR 410
Query: 441 L--KPE 444
L KP+
Sbjct: 411 LGMKPD 416
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/425 (37%), Positives = 238/425 (56%), Gaps = 1/425 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + F++ ++ + A+ +FS MR P D ++ AC++
Sbjct: 222 ARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAK 281
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ H V++ G V V N L+H+Y + A+ LFD D S N++
Sbjct: 282 SGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSM 341
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY+K G + A+ LFD MP +D VSW ++AG ++Q EA+ +F +M +IKPD+
Sbjct: 342 ISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDD 401
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ LVS +SAC+ L LEQGK +H YI Q + L T L+D Y KCG + A+E+F+
Sbjct: 402 VTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDM 461
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVDE 362
+EK WNA++VGLAM+GL SL FS M P+ +T G L C H GLV+E
Sbjct: 462 LEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEE 521
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R+ F M++ Y + ++HYGCM DLLGRAG + EA +MI+ MPM DV W LLG C
Sbjct: 522 GRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGAC 581
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
HG+ E+ E + ++KL P+ G +L+++YA+ W+ V +R S+ + K AG
Sbjct: 582 WKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVAG 641
Query: 483 CSLIQ 487
CS+++
Sbjct: 642 CSMVE 646
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 214/488 (43%), Gaps = 73/488 (14%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L+ + RC + + + QIHA FL GLL + + + +L T+ ++A+ PL
Sbjct: 7 LDAQLSRCCSARHLLQIHAQFLASGLL--ADAYAASRLLLFTTS----ATAARLLPHPLH 60
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
++L +F + P+ F+ NT+++A P L++ M PD Y+ P L AC+
Sbjct: 61 HSLQLFGLVRSPNAFTCNTLLKAALRQGFPHLCFPLYASMPAA---PDTYTHPLLAAACA 117
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+HS +K GF ++++ N+LMH+Y + A+ +FD D VS NT
Sbjct: 118 ARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNT 177
Query: 183 LIDGYVKAGDLAHARQLFDRMP-------------------------------FRDAVSW 211
++ YV+ GD+ A ++F RMP RDA +W
Sbjct: 178 ILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTW 237
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH----- 266
+V+ + ++D EA+ +F +M + D +VS ++ACA+ G ++ G+ H
Sbjct: 238 TAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVR 297
Query: 267 --------------------------RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
R + N +D F ++ Y K G + A +
Sbjct: 298 AGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKAL 357
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +K+ +W+AM+ G + +L F M IKPD VT++ + CS+ +
Sbjct: 358 FDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSAL 417
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++ KL E Y + + + D+ + G +E ALE+ + G W+ ++
Sbjct: 418 EQG-KLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKG-TPCWNAVIV 475
Query: 421 GCRIHGNV 428
G ++G V
Sbjct: 476 GLAMNGLV 483
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 259/480 (53%), Gaps = 20/480 (4%)
Query: 19 IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFS 78
IH L GLL + H+ T +L A SP +A +F+ +P
Sbjct: 31 IHCLLLKAGLLHVG-AHLPTALLSAYAAL------GSP-----DHARRLFDEMPEQGLVP 78
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC----SQLCSHSLAQTIH 134
+ RAH A+ +F M + PD + L AC S + + IH
Sbjct: 79 RTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIH 138
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+ V+ G + DVFV L+ VY L ++ +FD++ R ++ N ++ Y + G +
Sbjct: 139 ALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVD 198
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---IKPDNIALVSALS 251
A ++F MP RD VSW T++AGY + +C EA+ LF M+ + P+ + + L
Sbjct: 199 TAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILG 258
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS-QEKNLF 310
ACA G LE G +H YIE N++ D +L L+D Y KCG I+ A+++FE + ++K+LF
Sbjct: 259 ACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLF 318
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W ++ GLAMHG +L F M + I PD VT++G L C+H GLVDE F M
Sbjct: 319 SWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSM 378
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
E+ + ++ +++HYGCM DLLGR G ++EA MI+ MPM + +W L C++HGN+E+
Sbjct: 379 EAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMEL 438
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ AAE + +L P+D +L+ +YA A W + + RR +++ ++KK GCS I+L G
Sbjct: 439 GKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKG 498
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 248/430 (57%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +A +F+ + S+NT+I ++ ++ + LF M +I D + ++ A
Sbjct: 75 LGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILA 134
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L A ++ + + DV++
Sbjct: 135 CSHLGDWEFADSMVKYIKENNLEIDVYL-------------------------------G 163
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NTLID Y + G+L AR+LFD MP RD +SW +++ GY+Q+ Q +A++LF MM +K
Sbjct: 164 NTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVK 223
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + + S LSACA LG+L+ G +H YI + ++ D ++ L+D Y KCG + A+E+
Sbjct: 224 PDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEV 283
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F ++K+ +W +++ GLA++G +L FS+M+ ++P T +G L+ C+HAGLV
Sbjct: 284 FHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLV 343
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++ + F+ MESV+G+ +KHYGC+ DLL R+G I++A E IKKMP+ DV VW LL
Sbjct: 344 NKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLS 403
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C++HGNV +AE A + +++L P D G Y +L++ YA DRW+D +K+R ++ ++K
Sbjct: 404 ACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKP 463
Query: 481 AGCSLIQLNG 490
+G S I+++G
Sbjct: 464 SGSSSIEVDG 473
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 158/305 (51%), Gaps = 33/305 (10%)
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + + +++ +IH LKLGF +FV N+L+H+Y +
Sbjct: 35 TNINASTISSSIHVHALKLGFESYLFVSNALIHMYAM----------------------- 71
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
G L A+++FD M RD VSW TL+ GY+Q ++ +E ++LF M +IK
Sbjct: 72 --------CGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKA 123
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D + +V + AC+ LG+ E ++ +YI+ N + +D +L L+D Y + G + A ++F
Sbjct: 124 DAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLF 183
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
++ ++++ +W +M+ G + ++ F M+ A++KPD VT+ L C+H G +D
Sbjct: 184 DNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLD 243
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ + +GV ++ + D+ + G++E+ALE+ +M D W+ ++ G
Sbjct: 244 VGWAVHHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK-DKDSVSWTSVISG 301
Query: 422 CRIHG 426
++G
Sbjct: 302 LAVNG 306
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 268/513 (52%), Gaps = 47/513 (9%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
K++ + +IH HFL + + +++L+ +T + + + A +F+
Sbjct: 22 KSLTEAKKIHQHFLK------NTSNADSSVLHKLTRLYL-------SCNQVVLARRLFDE 68
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLN-AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
IP PS +N IIRA+ ++ P + A+ L+ M + + P+ Y++PF+L+ACS L +
Sbjct: 69 IPNPSVILWNQIIRAYA-WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG--- 186
IHS G DVFV +L+ Y L +AQ LF + +RDVV+ N +I G
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187
Query: 187 YVKAGD-----------------------------LAHARQLFDRMPFRDAVSWGTLVAG 217
Y D L +AR++FD M R+ VSW ++ G
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGG 247
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
Y SD +EA+ +F M I PD ++ L AC+ L L+ G H Y+ + D
Sbjct: 248 YVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATD 307
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
+ + L+D Y+KCG I+ A E+F ++ +WNAM++G +HGLG +L F ++
Sbjct: 308 TLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLA 367
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
+KPD +T + L CSH+GLV E R FD M + + ++H CM D+LGRAGLI+
Sbjct: 368 LGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLID 427
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
EA I+ MP DV +WS LL CRIH N+E+ E ++ + L PE G + +L+++Y+
Sbjct: 428 EAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYS 487
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
A RW+D IR + +KK GCS I++NG
Sbjct: 488 AAGRWDDAAHIRITQKDWGLKKIPGCSWIEING 520
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 146/313 (46%), Gaps = 42/313 (13%)
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
++ LL AC Q S + A+ IH LK D VL+ L +Y +++ A+ LFDEI
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
V+ N +I Y G PF + AI L+
Sbjct: 70 PNPSVILWNQIIRAYAWNG------------PF-------------------DGAIDLYH 98
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
+M+ L ++P+ L AC+ L +E G IH + ++ + D F+ T LVDFYAKCG
Sbjct: 99 SMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
+ A +F S +++ WNAM+ G +++GL ++ +M E I P+ TI+G L
Sbjct: 159 ILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG-- 410
C + ARK+FD V GV E+ + M + ++EAL++ + M + G
Sbjct: 219 TCQ---CLLYARKIFD----VMGVRNEVS-WSAMIGGYVASDCMKEALDIFRMMQLSGID 270
Query: 411 -DVFVWSGLLGGC 422
D+ G+L C
Sbjct: 271 PDLTTMLGVLPAC 283
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L AC + L + K IH++ N DS + L Y C + A +F+ ++
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
WN ++ A +G ++ + M+ ++P+ T L CS +++ ++
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ ++G+ ++ + D + G++ EA + M DV W+ ++ GC ++G
Sbjct: 135 AK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYG--- 189
Query: 430 IAEAAAEHVMKLKPE 444
+ + A + +M+++ E
Sbjct: 190 LCDDAVQLIMQMQEE 204
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 283/546 (51%), Gaps = 74/546 (13%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C T ++ +Q+HA + L LYA P + L YA S
Sbjct: 22 LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYA-----------DPRINNLQYAHS 70
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ I P+ S+N +I+ + +A+ LF ++ PD ++ P +L+ C++L +
Sbjct: 71 LFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGA 129
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSL--MHVYC--------VFHRLRD------------ 164
+ IH VLK+GF D FVL+SL M+ C VF R+ D
Sbjct: 130 LQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDG 189
Query: 165 ----------------------------------------AQELFDEILYRDVVSCNTLI 184
A+++FD + R+ VS N +I
Sbjct: 190 YARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMI 249
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
+GY+KAGD A++LFD+MP R V+W +++ GY ++ Q +A++LF M+ DI P+
Sbjct: 250 NGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYT 309
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
++ A+SA + + L G+ +H YI + + D L T L++ Y+KCG + +A+ +F S
Sbjct: 310 TILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSI 369
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+K L W +++VGL MHGL +L F M +KP +T +G L CSHAG ++A
Sbjct: 370 PKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAH 429
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F M YG+ ++HYGC+ D+L RAG +EEA + I++MP+ + +W+ LL G R
Sbjct: 430 RYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRK 489
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGN+ + E AA+H++ L P+ G Y +L+++YA A WE V ++R + +KK+ GCS
Sbjct: 490 HGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCS 549
Query: 485 LIQLNG 490
I+ G
Sbjct: 550 SIEHQG 555
>gi|357473845|ref|XP_003607207.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508262|gb|AES89404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 282/536 (52%), Gaps = 63/536 (11%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + + +I ++ Q+ A GL P LTT L + P + LS+A
Sbjct: 11 SLLNKLSSISELKQLQAIITKSGLHSHIP---LTTKLIFFSALSPFGN--------LSHA 59
Query: 65 LSIF--NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
S+F ++I + F NT+IRA + PL A+++++QM ++ D Y+ F+L+ACS
Sbjct: 60 YSLFQHSSILIHNPFISNTMIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACS 119
Query: 123 Q----------------LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
+ + ++ IH +V+K+GF D V NSL++ Y + A+
Sbjct: 120 RAYKLIQESGSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVAR 179
Query: 167 ELFDEI----------------LYRD---------------VVSCNTLIDGYVKAGDLAH 195
LFD+I L D VVS NTLI Y++ GD+
Sbjct: 180 HLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQA 239
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
AR++F MP R+AVSW +++AG A++LF M + +KP + L+S L ACA
Sbjct: 240 ARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAE 299
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
G LE G I+ +++ + +++S+L LV+ Y KCG ++ A EIF + K + WNAM
Sbjct: 300 TGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAM 359
Query: 316 LVGLAMHGLGRLSLVYFSRMIEA---RIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
++GLA+HG F+ M E+ I+PD VT +G LV CSH GLVD+AR FD M
Sbjct: 360 VIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVK 419
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
Y + + KHYGCM DLL R GL+EEA ++I P V +W LLG CR N E+AE
Sbjct: 420 RYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAE 479
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ + + KLK G Y +L+++YA A RW++V ++R +D + + AG S I +
Sbjct: 480 ISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 535
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 281/522 (53%), Gaps = 40/522 (7%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
LN ++ CKT+ Q+ Q+H GL I +T+ + I+S S +
Sbjct: 28 LNESLRCCKTLNQLKQLHCQITKNGLD-----QIPSTLTKLVNAGAEIASPESLDYARKA 82
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
+ L + + F N++IR ++ A++L+ +M + + P+ Y+FPF+L C+
Sbjct: 83 FELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCT 142
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS--- 179
++ + +H V+K+G DVF+ N L+H Y + ++F+ + R+VVS
Sbjct: 143 KIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTS 202
Query: 180 --------------------------CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
N L+D Y+K G + A++LFD R+ V + T
Sbjct: 203 LICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNT 262
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL-----GELEQGKNIHRY 268
+++ YA+ EA+ + M+ +PD + ++SA+SA A+L G++ G +H Y
Sbjct: 263 ILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTY 322
Query: 269 IELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
IE N I D L+T LVD +A+CG +A+++F E+++ W A + +AM G G +
Sbjct: 323 IEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGA 382
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
F++M+ +KPD V + L CSH G V++ +F ME +G+S +++HYGCM D
Sbjct: 383 TGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVD 441
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
LLGRAGL+ EA ++IK MPM + VW LL CR+H NVE+A AAE + +L P+ GV
Sbjct: 442 LLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGV 501
Query: 449 YKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ +L+++YA+A +W DV ++R +L ++K G S +Q+NG
Sbjct: 502 HVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNG 543
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 273/500 (54%), Gaps = 22/500 (4%)
Query: 2 TLNNFI----KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPT 57
T NN I ++CK+++ + QIHAH L K L SP YAI +++ S
Sbjct: 5 TFNNAISPLLRKCKSVQHLKQIHAHLL-KTYLSQSP--------YAIAPLLEVAATSGCD 55
Query: 58 TDPL-SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
D SYA IF N+ + F YN++IR + L P A++ + + + Y+FP
Sbjct: 56 RDSFFSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPP 115
Query: 117 LLRACSQLCSH--SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
L++AC+ + + +H+ V+ LG+ D FV+++L+ Y +F L+ A+ LFD+
Sbjct: 116 LIKACALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSG 174
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
+DVV ++DGY K GD+ AR LFD MP R+ +SW ++A Y++ E + LF M
Sbjct: 175 KDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQM 234
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+I P++ + S L+ACA LG + QG +H Y + + + L+T LVD Y+KCGYI
Sbjct: 235 QKKNIVPNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYI 294
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+A+E+FE K+ WNAM+ G AM G SL F +MI + + T + L C
Sbjct: 295 ESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAAC 354
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---- 410
+HA +V+ + FD+M VY V + +HY C+ DL+ RAG++E+A + +++ MGG
Sbjct: 355 THAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEE-KMGGFSNV 413
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR 470
D VW +L CR + N+EI + + L DGG + ++++ A R ++R+
Sbjct: 414 DANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRK 473
Query: 471 SLDAGKIKKNAGCSLIQLNG 490
+ KK GCS+I ++G
Sbjct: 474 KFSEARSKKIPGCSVIVVDG 493
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 269/480 (56%), Gaps = 43/480 (8%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
+I ++ QIHA + G+ +S + +++ + + P+ P+SYA +F+ I
Sbjct: 29 SITKLRQIHAFSIRHGV-SISDAELGKHLIFYLVSL--------PSPPPMSYAHKVFSKI 79
Query: 72 PYP-STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLCSHSL 129
P + F +NT+IR + + ++A L+ +MR + PD +++PFL++A + + L
Sbjct: 80 EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRL 139
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+TIHS V++ GF ++V NSL+H+Y
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYA-------------------------------N 168
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD+A A ++FD+MP +D V+W +++ G+A++ + EEA+ L+ M IKPD +VS
Sbjct: 169 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSACA++G L GK +H Y+ + + S L+D YA+CG + A +F+ +KN
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGLVDEARKLFD 368
+W +++VGLA++G G+ ++ F M + P +T +G L CSH G+V E + F
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M Y + ++H+GCM DLL RAG +++A E IK MPM +V +W LLG C +HG+
Sbjct: 349 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 408
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
++AE A +++L+P G Y +L+++YA+ RW DV KIR+ + +KK G SL+++
Sbjct: 409 DLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 468
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 237/425 (55%), Gaps = 1/425 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + F++ +I A+ LFS MR P D ++ AC++
Sbjct: 219 ARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACAR 278
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + H + G + V N+L+H+Y F + A+ LFD D S N++
Sbjct: 279 LEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSM 338
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY+K G + A++LF MP +D VSW T+++G Q+DQ EA+ +F NM IKPD
Sbjct: 339 IAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDE 398
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ LVS +SAC + LEQGK++H YI +Q + L T L+D Y KCG + +A+E+F++
Sbjct: 399 VTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDT 458
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI-KPDGVTILGALVGCSHAGLVDE 362
+E+ WNA++VGLAM+GL SL FS M + P+ +T G L C HAGLV+E
Sbjct: 459 MEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEE 518
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ F M+ Y + ++HYGCM DLLGRAG ++EA +I+ MPM DV W LLG C
Sbjct: 519 GQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSC 578
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
HG+ E+ E ++ L P G + +L+++YA+ W+ V +R S+ + K G
Sbjct: 579 WKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPG 638
Query: 483 CSLIQ 487
S+++
Sbjct: 639 SSVVE 643
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 211/489 (43%), Gaps = 78/489 (15%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L+ + RC + + + QIHA F+ GLL + + T P+ P
Sbjct: 7 LDAHLARCSSARHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPL---------PFH 57
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
++L + + + P+ FS N +++A P + L++ M S PD Y+ L AC+
Sbjct: 58 HSLRLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACA 114
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + +H ++ GF ++++ N+LM +Y L DA+++FD D VS NT
Sbjct: 115 TRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNT 174
Query: 183 LIDGYVKAGDLAHARQLFDRMPFR-------------------------------DAVSW 211
++ YV+A D+ A +F RMP R D +W
Sbjct: 175 ILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTW 234
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL-----GELEQG---- 262
+++ + ++ + EA+ LF +M D +V ++ACARL GE+ G
Sbjct: 235 TAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFR 294
Query: 263 ---------KN--IHRYIE-LNQIR----------VDSFLSTGLVDFYAKCGYINTAIEI 300
+N IH Y LN + +D F ++ Y K G + A E+
Sbjct: 295 AGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKEL 354
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +K+ +W M+ G + +L F+ M IKPD VT++ + C++ +
Sbjct: 355 FTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSL 414
Query: 361 DEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
++ + + + + E Y ++ L + D+ + G +E ALE+ M G W+ ++
Sbjct: 415 EQGKSMHEYIREHQYTITVILG--TSLIDMYMKCGCLESALEVFDTMEERGTP-CWNAVI 471
Query: 420 GGCRIHGNV 428
G ++G V
Sbjct: 472 VGLAMNGLV 480
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 259/480 (53%), Gaps = 20/480 (4%)
Query: 19 IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFS 78
IH L GLL + H+ T +L A SP +A +F+ +P
Sbjct: 32 IHCLLLKAGLLHVG-AHLPTALLSAYAAL------GSP-----DHARRLFDEMPEQGLVP 79
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC----SQLCSHSLAQTIH 134
+ RAH A+ +F M + PD + L AC S + + IH
Sbjct: 80 RTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVALAVALGACHGAGSWTARRNPGKKIH 139
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+ ++ G DVFV L+ VY +L ++ +FD++ R ++ N ++ Y + G +
Sbjct: 140 ALIVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQYARHGKVD 199
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---IKPDNIALVSALS 251
A +LF MP RD VSW T++AGY + +C EA+ LF M+ + P+ + + L
Sbjct: 200 TAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILG 259
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS-QEKNLF 310
ACA G LE G +H YIE N++ D +L L+D Y KCG I+ A+++FE + ++++LF
Sbjct: 260 ACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLF 319
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W ++ GLAMHG +L F M + I PD VT++G L C+H GLVDE F M
Sbjct: 320 SWTTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSM 379
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
E+ + ++ +++HYGCM DLLGR G ++EA MI+ MPM + +W L C++HGN+E+
Sbjct: 380 EAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMEL 439
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ AAE + +L P+D +L+ +YA A W + + RR +++ ++KK GCS I+L G
Sbjct: 440 GKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKG 499
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 262/512 (51%), Gaps = 55/512 (10%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYA----ITTFKPISSAS 54
T + K C I+ H Q+HAH L GL + H +YA + + + S
Sbjct: 130 TFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKS 189
Query: 55 SPTTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF 99
S D +S+ A +F+ IP S+N +I + A+ F
Sbjct: 190 S-MRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFF 248
Query: 100 SQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
+MR + P+ + +L AC+Q S L+LG
Sbjct: 249 EEMRRAKVTPNVSTMLSVLSACAQSGSS----------LQLG------------------ 280
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
+ +R E D L ++ N LID YVK GDL A LF+++ ++ VSW ++ GY
Sbjct: 281 NWVRSWIE--DRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYT 338
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN--QIRVD 277
+EA+ LF MM +I P+++ +S L ACA LG L+ GK +H Y++ N ++
Sbjct: 339 HMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNT 398
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
L T L+D YAKCG + A IF+ K+L TWNAM+ G AMHG +L FSRM
Sbjct: 399 VALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTS 458
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
PD +T +G L C HAGL+ R+ F M Y VS +L HYGCM DL GRAGL +
Sbjct: 459 EGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFD 518
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
EA ++K M M D +W LLG CRIH +E+AE+ A+H+ +L+PE+ Y +L+++YA
Sbjct: 519 EAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYA 578
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
A RWEDV KIR L+ ++KK GCS I+++
Sbjct: 579 GAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVD 610
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 222/428 (51%), Gaps = 14/428 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ CKT++ + QIH+ + GL H L + F A SP D LSYAL
Sbjct: 34 LLSNCKTLQTLKQIHSQIIKTGL------HNTHFALSKLIEF----CAVSPHGD-LSYAL 82
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
S+F I P+ +N +IR + SP A+ + M + P+ Y+FP + ++C+++
Sbjct: 83 SLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIR 142
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ +H+ VLKLG + FV SL+++Y L +A+ +FD+ RD VS LI
Sbjct: 143 GAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALIT 202
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY G L AR+LFD +P RD VSW +++GYAQS + EEA+ F M + P+
Sbjct: 203 GYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVST 262
Query: 246 LVSALSACARLG-ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
++S LSACA+ G L+ G + +IE + + L GL+D Y KCG + A +FE
Sbjct: 263 MLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI 322
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
Q+KN+ +WN M+ G + +L F RM+++ I P+ VT L L C++ G +D +
Sbjct: 323 QDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGK 382
Query: 365 KLFDEME-SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ ++ ++ + + + + D+ + G + A + M + W+ ++ G
Sbjct: 383 WVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKS-LATWNAMISGFA 441
Query: 424 IHGNVEIA 431
+HG+ + A
Sbjct: 442 MHGHTDTA 449
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 237/428 (55%), Gaps = 40/428 (9%)
Query: 72 PYPSTFSYNTIIRAHTLF----SSPLNA-VVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
P +F +NT+IRAH + P ++ + +F +MR + PDF++FPFLL++ +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L +++H+Q+L+ G D FV SL+ +Y S + L+D
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMY----------------------SSSGLVD- 116
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL---DIKPDN 243
AR LF MP R+ +SW ++ GY + Q +EA+ LF M L D++P+
Sbjct: 117 --------MARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 168
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ L+AC RLG LE GK H YI+ + VD L T L+D YAKCG + A +F +
Sbjct: 169 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 228
Query: 304 -SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K++ W+AM+ GLAMHGL + FS+MI ++P+ VT L C H GLV E
Sbjct: 229 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 288
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ M Y + ++HYGCM DL GRAG I+EA ++K MPM DV VW LL G
Sbjct: 289 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGS 348
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R+HG++E E A + +++L+P + G Y +L++VYA RWEDV +R ++ IKK G
Sbjct: 349 RMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPG 408
Query: 483 CSLIQLNG 490
CSLI++ G
Sbjct: 409 CSLIEVGG 416
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 244/424 (57%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + +P ++N II + +A+ LF MR+ + PD +L AC +
Sbjct: 178 LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S +TIH V G+ D + +L+++Y + A++++D + + ++ ++ G
Sbjct: 238 LSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG 297
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G + AR +FD+M RD V W +++GYA+SDQ +EA++LF M+ PD I +
Sbjct: 298 YAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITM 357
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S +SAC+ +G L Q IH Y++ + ++ L+D YAKCG + A E+FE+
Sbjct: 358 LSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPR 417
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
KN+ +W++M+ AMHG ++ F RM E I+P+GVT +G L C HAGLV+E KL
Sbjct: 418 KNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKL 477
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M + +G+S +HYGCM DL RA + +A+E+I+ MP +V +W L+ C++HG
Sbjct: 478 FSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHG 537
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
E+ E AA+ +++L+P+ G VL+++YA RW DV IR+S+ I K S I
Sbjct: 538 EAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRI 597
Query: 487 QLNG 490
++N
Sbjct: 598 EINN 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 195/414 (47%), Gaps = 65/414 (15%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLRACSQLC 125
+F+ IP P T N ++R + S P + L+ +R + + D +SFP LL+A S++
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + IH KLGF+ D F+ L+ +Y R+ DA+ LFD++ + D V+ N +ID
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY + G ++A++LF +M D+KPD++
Sbjct: 196 GYCQNG-------------------------------HYDDALRLFEDMRSSDMKPDSVI 224
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE--S 303
L + LSAC G L G+ IH +++ N +DS L T L++ YA CG ++ A +I++ S
Sbjct: 225 LCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLS 284
Query: 304 SQ-----------------------------EKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
S+ E++L W+AM+ G A + +L F
Sbjct: 285 SKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDE 344
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M++ R PD +T+L + CSH G + +A + ++ G + L + D+ + G
Sbjct: 345 MLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRS-GFGRALSVNNALIDMYAKCG 403
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
+ +A E+ + MP +V WS ++ +HGN + A + ++ E GV
Sbjct: 404 NLVKAREVFENMPR-KNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGV 456
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 256/432 (59%), Gaps = 2/432 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
L++A ++F+ +P S+ T++ + A +F +M + P+ + ++
Sbjct: 192 LAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVS 251
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
A Q+ + + ++ V G V + N+L+ ++ F A+E+FD + +DV S
Sbjct: 252 AMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYS 311
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
T+++ Y K GDL A +LFD MP R+AVSW ++A Y+Q++Q EEA++LF M++ +
Sbjct: 312 WTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGV 371
Query: 240 KPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+P N LVS LSACA+LG L+ G+ I+ Y+ + + L +D YAKCG + A
Sbjct: 372 EPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAAS 431
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F E+N+ +WN+M++ A+HG L F ++ I PD +T LG L CSH+G
Sbjct: 432 KLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSG 491
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV E R+ F EM+ +YG+ + +HY CM DLLG+ GL+EEA E+ K MPM D W L
Sbjct: 492 LVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGAL 551
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR++GNVEI E AA+ +++L P D G+Y +++ +YA+ ++W+ V +R + +K
Sbjct: 552 LNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVK 611
Query: 479 KNAGCSLIQLNG 490
KN GCS I+++G
Sbjct: 612 KNPGCSSIEVDG 623
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 181/435 (41%), Gaps = 77/435 (17%)
Query: 41 LYAITTFKPISSASSPTTDPLSY-ALSIFNNIPY----------PSTFSYNTIIRAHTLF 89
L+A+ T +++ P + L++ ALS + + P+ + T++RA
Sbjct: 56 LHALLTVSGLAAHRFPASRLLAFCALSTPPRVDHAAAILARASAPNAYMLATMMRAFLRA 115
Query: 90 SSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH---SLAQTIHSQVLKLGFICD- 145
P A LF ++ S+P D + F ++A + H S + +H LK G +
Sbjct: 116 RLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGEGVHCVALKWGHVAQS 175
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
V V N+L+H Y L A+ LFDE+ RDVVS TL+DGY + G A ++F RM
Sbjct: 176 VLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRM-- 233
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
+VAG ++P+ + LV+ +SA ++G L G+ +
Sbjct: 234 --------VVAG--------------------GLQPNEVTLVAVVSAMGQMGLLAFGRMV 265
Query: 266 HRY---------IELNQIRVDSFLSTG----------------------LVDFYAKCGYI 294
+RY + L +D F G +V+ YAKCG +
Sbjct: 266 YRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDL 325
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+A +F+ +N +W+ M+ + ++ F MIE ++P ++ L C
Sbjct: 326 ESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSAC 385
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ G +D R ++D + D+ + G + A ++ +M +V
Sbjct: 386 AQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAE-RNVVS 444
Query: 415 WSGLLGGCRIHGNVE 429
W+ ++ +HG E
Sbjct: 445 WNSMIMAHAVHGQSE 459
>gi|242042081|ref|XP_002468435.1| hypothetical protein SORBIDRAFT_01g045890 [Sorghum bicolor]
gi|241922289|gb|EER95433.1| hypothetical protein SORBIDRAFT_01g045890 [Sorghum bicolor]
Length = 506
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 261/448 (58%), Gaps = 18/448 (4%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPST------FSYNTIIRAHTLFSSPLNAVVLFSQMRTV 105
+A SP D ++ + ++P+ S F YNT+IR + SSP + LF+ MR
Sbjct: 52 AAVSPAGDLRHASVLLSLHLPFISAAASHLAFFYNTLIRGFAVSSSPSAGIELFTAMRRA 111
Query: 106 SIPPDFYSFPFLLRACSQLCSHS-LAQTIHSQVLKLGFIC----DVFVLNSLMHVYCVFH 160
PD ++F F+L++CS+ S L +H+Q K G + V V N+L+H Y
Sbjct: 112 GAAPDAFTFTFVLKSCSRCHSPGRLPSDLHAQAFKHGCLSARSEHVHVHNALLHAYASRS 171
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
+ DA +FDE+ RDVVS + L+ ++K L AR +FD+MP RD VSW +++ YA+
Sbjct: 172 AVDDAHRVFDEMPVRDVVSFSGLLTAHLKNNQLDSARMVFDQMPHRDVVSWTAMISAYAR 231
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
+ + ++A+ LF M ++PD + +VS +SAC LG+L G+ + Y++ N L
Sbjct: 232 ASRPQDALALFDAM---PVQPDEVTMVSVVSACTALGDLATGERLRLYVDSNGFGWMVSL 288
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI--EA 338
L+D YAKCG + A E+F+ ++L +WN +++ A HG ++ F +M+ +
Sbjct: 289 RNALMDMYAKCGCLPEARELFDGMAIRSLASWNTLILAYASHGDEESTIALFHQMLAHDN 348
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEME-SVYG-VSKELKHYGCMADLLGRAGLI 396
+KPDGVT+L L +H G V+E R +FD M+ YG V ++HYGCM DLL RAG +
Sbjct: 349 SVKPDGVTLLAVLTMYAHKGCVEEGRTVFDAMQRGDYGKVELTVEHYGCMVDLLSRAGHL 408
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
EEA +MI++M + + VW LLG CR+HGN+++AE A + + L P +GG Y +L D+Y
Sbjct: 409 EEAYKMIEQMSIPSNDVVWGVLLGACRMHGNIDMAEKAVQKLRILNPHEGGYYILLIDMY 468
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCS 484
A R + +++RR+++ + KK G S
Sbjct: 469 TAAGRTAEAMEVRRTMNKTRAKKTTGWS 496
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/485 (35%), Positives = 271/485 (55%), Gaps = 13/485 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ K + ++ QIH H L GLL S L L + + + A
Sbjct: 71 LLQTTKFVAEVKQIHCHALVFGLL--SKEEYLRNSLIK----RYVDNGC------FECAR 118
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ + + SYNT+I + L + LF MR+ + PD ++ LL C QL
Sbjct: 119 QLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLG 178
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
L +++H+Q+ K ++ + N+L+ +Y + L+ A+++FD + +D VS NT+I
Sbjct: 179 ETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIA 238
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY K G+L A LF+++P RD VSW +L++GYAQ+ LF M ++KPD +
Sbjct: 239 GYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVT 298
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ +SA A +G L+QG+ IH ++++F + L+D Y KCG I A IF
Sbjct: 299 IVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIP 358
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
EK++ TW M+ G A HG G +L FS M +A KP+ VT + L CSH+GLVDE K
Sbjct: 359 EKDVTTWTTMITGFAFHGFGNKALELFSVM-QAETKPNDVTFVSVLAACSHSGLVDEGLK 417
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+F M+ Y + ++HYGC+ DLL R+G + +A+ +I+KMPM +W +L CR+H
Sbjct: 418 IFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMH 477
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+E+AE A ++KL+PE G Y +L++VYA RW IR +++ +KK AGCS
Sbjct: 478 RNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSS 537
Query: 486 IQLNG 490
+ ++G
Sbjct: 538 VAVDG 542
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 187/446 (41%), Gaps = 92/446 (20%)
Query: 51 SSASSPTTDPLSYALSIFNNI-PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP 109
S+ S P + L A+ +FN+ PYP+ + +NT+I S A ++ M P
Sbjct: 8 SAVSHP--ENLELAILLFNHFTPYPNLYIFNTMILGFPF--SNEKAFTIYRSMLQNGTYP 63
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQEL 168
D +F +LL+ + + IH L G + + ++ NSL+ Y A++L
Sbjct: 64 DRQTFLYLLQTTKFVAE---VKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQL 120
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
FDE+ R+VVS NT+I G+ K G++ G L
Sbjct: 121 FDEMSDRNVVSYNTMILGFAKVGNIL-----------------GIL-------------- 149
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
+LF +M ++PD+ ++ L C +LGE + GK++H IE + + L L+D Y
Sbjct: 150 ELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMY 209
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV------------------ 330
KC + A ++F+ EK+ +WN ++ G A +G L L
Sbjct: 210 VKCNELKLARKVFDGPMEKDTVSWNTIIAGYA--KVGELELACDLFNQIPTRDIVSWNSL 267
Query: 331 ---------------YFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR-------KLFD 368
F+RM +KPD VTI+ + + G +D+ R K+
Sbjct: 268 ISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLT 327
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
++E+ G + D+ + G IE A + ++P DV W+ ++ G HG
Sbjct: 328 KIEAFSG--------SALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHGFG 378
Query: 429 EIA-EAAAEHVMKLKPEDGGVYKVLA 453
A E + + KP D VLA
Sbjct: 379 NKALELFSVMQAETKPNDVTFVSVLA 404
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/485 (35%), Positives = 271/485 (55%), Gaps = 13/485 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ K + ++ QIH H L GLL S L L + + + A
Sbjct: 136 LLQTTKFVAEVKQIHCHALVFGLL--SKEEYLRNSLIK----RYVDNGC------FECAR 183
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ + + SYNT+I + L + LF MR+ + PD ++ LL C QL
Sbjct: 184 QLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLG 243
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
L +++H+Q+ K ++ + N+L+ +Y + L+ A+++FD + +D VS NT+I
Sbjct: 244 ETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIA 303
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY K G+L A LF+++P RD VSW +L++GYAQ+ LF M ++KPD +
Sbjct: 304 GYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVT 363
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ +SA A +G L+QG+ IH ++++F + L+D Y KCG I A IF
Sbjct: 364 IVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIP 423
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
EK++ TW M+ G A HG G +L FS M +A KP+ VT + L CSH+GLVDE K
Sbjct: 424 EKDVTTWTTMITGFAFHGFGNKALELFSVM-QAETKPNDVTFVSVLAACSHSGLVDEGLK 482
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+F M+ Y + ++HYGC+ DLL R+G + +A+ +I+KMPM +W +L CR+H
Sbjct: 483 IFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMH 542
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+E+AE A ++KL+PE G Y +L++VYA RW IR +++ +KK AGCS
Sbjct: 543 RNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSS 602
Query: 486 IQLNG 490
+ ++G
Sbjct: 603 VAVDG 607
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 204/491 (41%), Gaps = 101/491 (20%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+++C + Q QI H + L+ ++ +L+ S+ S P + L A+
Sbjct: 37 LLEKCNSRTQFKQILGHMMRNNLV--GQTFPMSRLLF-------FSAVSHP--ENLELAI 85
Query: 66 SIFNNI-PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+FN+ PYP+ + +NT+I S A ++ M PD +F +LL+ +
Sbjct: 86 LLFNHFTPYPNLYIFNTMILGFPF--SNEKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFV 143
Query: 125 CSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ IH L G + + ++ NSL+ Y A++LFDE+ R+VVS NT+
Sbjct: 144 AE---VKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTM 200
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ K G++ G L +LF +M ++PD+
Sbjct: 201 ILGFAKVGNIL-----------------GIL--------------ELFHDMRSHGLEPDD 229
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
++ L C +LGE + GK++H IE + + L L+D Y KC + A ++F+
Sbjct: 230 FTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDG 289
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLV--------------------------------- 330
EK+ +WN ++ G A +G L L
Sbjct: 290 PMEKDTVSWNTIIAGYA--KVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKC 347
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR-------KLFDEMESVYGVSKELKHY 383
F+RM +KPD VTI+ + + G +D+ R K+ ++E+ G
Sbjct: 348 LFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSG-------- 399
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA-EAAAEHVMKLK 442
+ D+ + G IE A + ++P DV W+ ++ G HG A E + + K
Sbjct: 400 SALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHGFGNKALELFSVMQAETK 458
Query: 443 PEDGGVYKVLA 453
P D VLA
Sbjct: 459 PNDVTFVSVLA 469
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 219/346 (63%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D V +SL+ +YC + DA+ +FDE+ RDVV+ N +I GYVKAGD AHAR+LFD MP
Sbjct: 112 DAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMP 171
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
R+ VSW T++ GYAQ + E+A+++F M I+ D +AL+S L+AC LG ++ G+
Sbjct: 172 ERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEW 231
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
+HR++ + + L ++D Y KCG I A+E+FE +EK++ TW ++ G A+HGL
Sbjct: 232 VHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGL 291
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
G ++ F RM + P+ VT L L CSH GL D R F+ M S Y + ++HYG
Sbjct: 292 GLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYG 351
Query: 385 CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
CM DLLGRAG ++EA +++K MP+ + +W LL R HG+ + E A H+++L+P
Sbjct: 352 CMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELEPN 411
Query: 445 DGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ G Y +L++++A +RW DV K+R+++ ++ G S I+++G
Sbjct: 412 NSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDG 457
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 35/290 (12%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
++A +F+ +P + S+ T+I + P AV +F +M+ I D + +L AC
Sbjct: 161 AHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAAC 220
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
L + L + +H V++ G ++ ++NS++ +Y + A E+F+ + + VV+
Sbjct: 221 GDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWT 280
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
TLI AG+A +A+++FC M ++ P
Sbjct: 281 TLI-------------------------------AGFALHGLGLQAVEMFCRMERENMAP 309
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAIE 299
+ + ++ LSAC+ +G + G+ + I ++Q R+ + +VD + G + A +
Sbjct: 310 NAVTFLAILSACSHVGLTDLGR-WYFNIMVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQD 368
Query: 300 IFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+ ++ K N W A+L HG L +IE G IL
Sbjct: 369 LVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELEPNNSGNYIL 418
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 259/481 (53%), Gaps = 43/481 (8%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CK I QI Q+HA T +L+ + + +LY K ++ A YAL F+
Sbjct: 1092 CKNICQIKQLHALITTNSVLY-NNLTVANKLLYVYVHHKCLTDA---------YAL--FD 1139
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+P + S++ +I + F ++ + PD Y+ PF+++AC + +
Sbjct: 1140 EMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDM 1199
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ IH VLK G D FV C L+D Y K
Sbjct: 1200 GRLIHCVVLKYGLHLDHFV-------------------------------CAALVDMYAK 1228
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
+ A+ LFD MP +D V+W ++ GYA+ +E++ LF ++ + PD IA+VS
Sbjct: 1229 CKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSI 1288
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
++ACA+LG + + + +H Y+ N+ +D L T ++D YAKCG +++A EIF++ KN+
Sbjct: 1289 VNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNV 1348
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+W+AM+ HG G+ +L F M+ + I P+ +T + L CSHAGLV++ L
Sbjct: 1349 ISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSL 1408
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M +GV ++KH+ CM DLLGRAG + EA I+ M + D +WS LLG CRIH ++
Sbjct: 1409 MWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRID 1468
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+AE AA+ +++L+P++ G Y +L+++YANA +W+DV KIR + K+KK G + I+L
Sbjct: 1469 LAEKAAKSLLELQPQNPGNYILLSNIYANAGQWKDVAKIRDLMTKRKLKKIPGYTWIELK 1528
Query: 490 G 490
Sbjct: 1529 S 1529
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 239/423 (56%), Gaps = 2/423 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F IP S+ TII + A++++ M + + P + L+ AC +
Sbjct: 146 AKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMYRLMVSTGLGPSEVTMIDLISACGR 205
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ Q +H V+K F C FV +++H Y R+ +A + + V S N L
Sbjct: 206 AMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACFQLEFGMKDHVASRNAL 265
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+++ + AR+LF+ MP RD SW T+++GY QSDQ A++LF M+ I+P+
Sbjct: 266 IAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMALELFHRMVTSGIRPNE 325
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +VS SA A LG L++G+ H Y+ N I ++ LS ++D YAKCG INTA+E+F
Sbjct: 326 VTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLSASIIDMYAKCGSINTALEVFYQ 385
Query: 304 SQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
++K + WN ++ GLA HG +LSL +S + IK +T +G L C HAGLV
Sbjct: 386 IRDKASTVSPWNTIICGLATHGHAKLSLEIYSDLQRRHIKLSAITFIGVLSACCHAGLVG 445
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ F M+S Y + +++HYGCM DLLG+AG +EE E+I+ MPM DV +W LL
Sbjct: 446 LGKSYFKSMKSKYNIDPDIRHYGCMVDLLGKAGRLEEVEELIRSMPMKADVVIWGMLLSA 505
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C+ H N+ I E AAE++ KL P G +L+++YA+ RWED +RR + + ++ +
Sbjct: 506 CKTHRNITIGERAAENLAKLDPSHGPSRILLSNLYADVGRWEDAFLVRRVMQSHRMHRLP 565
Query: 482 GCS 484
G S
Sbjct: 566 GYS 568
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 191/413 (46%), Gaps = 53/413 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F +P SY T+I A+ ++ +MR+V + P+ + ++ A
Sbjct: 11 LDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPNEVTMASVISA 70
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C ++ + +H V+K+ F V V +L+++YC L +A+ LFDE+ ++VVS
Sbjct: 71 CCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFDEMQEKNVVSW 130
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +++GY KAG A+++F+ +P +D VSWGT++ GY + ++ EA+ ++ M+ +
Sbjct: 131 NVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMYRLMVSTGLG 190
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI-- 298
P + ++ +SAC R + +G+ +H + F+ ++ FY+ CG IN A
Sbjct: 191 PSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACFQ 250
Query: 299 -----------------------------EIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
E+F E+++F+W+ M+ G ++L
Sbjct: 251 LEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMAL 310
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA-- 387
F RM+ + I+P+ VT++ + G + E R + E HY +
Sbjct: 311 ELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRW-----------AHEYVHYNSIPLN 359
Query: 388 --------DLLGRAGLIEEALEMIKKM-PMGGDVFVWSGLLGGCRIHGNVEIA 431
D+ + G I ALE+ ++ V W+ ++ G HG+ +++
Sbjct: 360 DNLSASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKLS 412
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 134/302 (44%), Gaps = 66/302 (21%)
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I GYVK+G+L AR+LF+ MP + VS+ T++ G+ ++D EAI+++ M + + P+
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF--LSTGLVDFYAKCGYINTAIEI 300
+ + S +SAC R+G + + +H + ++ D F +ST L++ Y + A +
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLV--IKMMFDGFVLVSTNLLNMYCASSSLGEARAL 118
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRL-------------------------------SL 329
F+ QEKN+ +WN ML G + G L +L
Sbjct: 119 FDEMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREAL 178
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL--------FDEMESV-------- 373
+ + M+ + P VT++ + C A + E ++L FD + V
Sbjct: 179 MMYRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFY 238
Query: 374 --------------YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+G+ + + R +I++A E+ +MP DVF WS ++
Sbjct: 239 SACGRINEACFQLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMP-ERDVFSWSTMI 297
Query: 420 GG 421
G
Sbjct: 298 SG 299
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 256/480 (53%), Gaps = 44/480 (9%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C+ + Q+ Q+HA G+L + ++Y + ++ + A +F+
Sbjct: 72 CRNLTQVRQVHAQASVHGML--ENIVVANKLIYFYSYYRALDDA-----------YGLFD 118
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ + S++ ++ +N F ++ PD Y+ PF++RAC L + +
Sbjct: 119 GMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM 178
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ IH V K G D FV C L+D YVK
Sbjct: 179 GRLIHHIVYKFGLDLDHFV-------------------------------CAALVDMYVK 207
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
++ AR LFD+M RD V+W ++ GYA+ + E++ LF M + + PD +A+V+
Sbjct: 208 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 267
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
+ ACA+LG + + + I YI+ + ++D L T ++D YAKCG + +A EIF+ +EKN+
Sbjct: 268 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 327
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+W+AM+ HG GR +L F M+ + + PD +T+ L CSHAGLV+E + F
Sbjct: 328 ISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSS 387
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M Y V ++KHY C+ DLLGRAG ++EAL++IK M + D +W LG CR H +V
Sbjct: 388 MWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVV 447
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+AE AA +++L+ ++ G Y +L+++YANA RWEDV KIR + ++KK G + I+++
Sbjct: 448 LAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVD 507
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 235/429 (54%), Gaps = 31/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ + + S++ ++ +N F ++ PD Y+ PF++RA
Sbjct: 786 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRA 845
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L + + + IH V K G D FV C
Sbjct: 846 CRDLKNLQMGRLIHHIVYKFGLDLDHFV-------------------------------C 874
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D Y K ++ AR LFD+M RD V+W ++ GYA+ E++ LF M + +
Sbjct: 875 AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +A+V+ + ACA+LG + + + I YI+ + ++D L T ++D +AKCG + +A EI
Sbjct: 935 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +EKN+ +W+AM+ HG GR +L F M+ + I P+ +T++ L CSHAGLV
Sbjct: 995 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 1054
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E + F M Y V ++KHY C+ DLLGRAG ++EAL++I M D +W LG
Sbjct: 1055 EEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR H +V +AE AA +++L+P++ G Y +L+++YANA RWEDV KIR + ++KK
Sbjct: 1115 ACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKI 1174
Query: 481 AGCSLIQLN 489
G + I+++
Sbjct: 1175 PGWTWIEVD 1183
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
+ ++++ N L+ Y L A LFD M RD+VSW +V G+A+ F
Sbjct: 766 MLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFR 825
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
++ +PDN L + AC L L+ G+ IH + + +D F+ LVD Y KC
Sbjct: 826 ELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR 885
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
I A +F+ E++L TW M+ G A G SLV F +M E + PD V ++ +
Sbjct: 886 EIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 945
Query: 353 GCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
C+ G + +AR + D +++ + G + M D+ + G +E A E+ +
Sbjct: 946 ACAKLGAMHKARTIDDYIQRKKFQLDVILGTA--------MIDMHAKCGCVESAREIFDR 997
Query: 406 MPMGGDVFVWSGLLGGCRIHGN 427
M +V WS ++ HG
Sbjct: 998 ME-EKNVISWSAMIAAYGYHGQ 1018
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+SAL C L ++ Q +H ++ + + ++ L+ FY+ ++ A +F+
Sbjct: 66 ISALVNCRNLTQVRQ---VHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV 122
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ +W+ M+ G A G F +I +PD T+ + C + R +
Sbjct: 123 RDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLI 182
Query: 367 FDEMESVYGVSKELKHYGCMA--DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
VY +L H+ C A D+ + IE+A + KM D+ W+ ++GG
Sbjct: 183 H---HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKM-QERDLVTWTVMIGG 235
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 270/480 (56%), Gaps = 43/480 (8%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
++ ++ QIHA + G+ +S + +++ + + P+ P+SYA +F+ I
Sbjct: 29 SLTKLRQIHAFSIRNGV-SISDAELGKHLIFYLVSL--------PSPPPMSYAHKVFSKI 79
Query: 72 PYP-STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLCSHSL 129
P + F +NT+IR + + ++AV L+ +MR + PD +++PFLL+A ++ L
Sbjct: 80 EKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRL 139
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+TIHS V++ GF ++V NSL+H+Y
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYA-------------------------------N 168
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD+A A ++FD+MP +D V+W +++ G+A++ + EEA+ L+ M IKPD +VS
Sbjct: 169 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSL 228
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSACA++G L GK H Y+ + + S L+D YA+CG + A +F+ +KN
Sbjct: 229 LSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGLVDEARKLFD 368
+W +++VGLA++GLG+ ++ F M + P +T +G L CSH G+V E + F
Sbjct: 289 VSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M Y + ++H+GCM DLL RAG +++A E I KMPM +V +W LLG C +HG+
Sbjct: 349 RMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDS 408
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
++AE A +++L+P G Y +L+++YA+ RW DV KIR+ + ++K G SL+++
Sbjct: 409 DLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEV 468
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 249/437 (56%), Gaps = 16/437 (3%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
D + A F+ +P + S+ ++I + A VLF M D S+
Sbjct: 179 NNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPV----KDLASWNV 234
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
++ + A+ I ++ I D N ++ +C L A++ FD + ++
Sbjct: 235 MVSGYMDIGDCVNARIIFGKMP----IHDTGSWNIMISGFCKAGELESAKDFFDRMPNKN 290
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V+S ++DGY+K GD AR LFD+MP ++ V+W T++ GYA++ Q +A++LF +
Sbjct: 291 VISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKE 350
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNI-HRYIE---LNQIRVDSFLSTGLVDFYAKCG 292
DIKPD ++ +SAC++LG ++ ++I H Y+ L+ +RV T L+D YAKCG
Sbjct: 351 QDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRV----FTSLIDMYAKCG 406
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
I A+++FE + K+L ++ M+ LA HGLGR ++ F +M A IKPD VT LG L
Sbjct: 407 SIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLT 466
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C+H GLVDE RK F +M +G+ KHY C+ DLLGR G +EEA +I+ MP+
Sbjct: 467 ACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHS 526
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
VW LL CR+H NV++AE AA + K++P++ G Y +L+++YA A RW V K+R +
Sbjct: 527 VVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKI 586
Query: 473 DAGKIKKNAGCSLIQLN 489
+++KN G S I+L+
Sbjct: 587 REHRVRKNRGSSWIELS 603
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 214/452 (47%), Gaps = 51/452 (11%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I CKT+K + IHA L + + S ++ +L + F TD YA
Sbjct: 7 HIIHNCKTLKSLKSIHARLLIESSV-ASSEFVINKLLRLYSRFG--------ATD---YA 54
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ I P+ + + ++I + A LF QMR I ++ +L+A ++L
Sbjct: 55 HKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARL 114
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
Q ++ VLK GF D+ V NS++ ++ ++ A++ FDE+ +D+VS N +I
Sbjct: 115 TRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMI 174
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY + AR+ FDRMP R+ VSW +++ GY ++ EA LF +M D+ N+
Sbjct: 175 SGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNV 234
Query: 245 AL---------VSA------------------LSACARLGELEQGKNIHRYIELNQIRVD 277
+ V+A +S + GELE K+ +++
Sbjct: 235 MVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDF-----FDRMPNK 289
Query: 278 SFLSTG-LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
+ +S G ++D Y K G N A +F+ KNL TW+ M+ G A +G +L F R
Sbjct: 290 NVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFK 349
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS--KELKHYGCMADLLGRAG 394
E IKPD ILG + CS G++D A + + + G S +L+ + + D+ + G
Sbjct: 350 EQDIKPDETFILGIISACSQLGIIDAAESI---IHNYVGPSLLSDLRVFTSLIDMYAKCG 406
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
IE+AL+M +M D+ +S ++ HG
Sbjct: 407 SIEKALQMF-EMAHPKDLLCYSTMIAALANHG 437
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 268/460 (58%), Gaps = 10/460 (2%)
Query: 37 LTTILYAITTFKPIS--SASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLF-SSPL 93
LTT+ +A T F + T L+YA IF++IP +T + +I A+ ++
Sbjct: 29 LTTLGHAHTHFYAFKLIRFCTLTLSNLTYARLIFDHIPSLNTHLFTAMITAYAAHPATHP 88
Query: 94 NAVVLFSQMRTVSIP-PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSL 152
+A+ LF M P P+ + FP L+ C + C+ A+++H+Q++K GF V +L
Sbjct: 89 SALSLFRHMLRSQPPRPNHFIFPHALKTCPESCA---AESLHAQIVKSGFHEYPVVQTAL 145
Query: 153 MHVYC-VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSW 211
+ Y V L +A+++FDE+ R VVS ++ G+ + GD+ A ++F M RD SW
Sbjct: 146 VDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVSGFARVGDVESAVRVFGEMLDRDVPSW 205
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
L+AG Q+ + I+LF M+ +P+ + +V ALSAC +G L+ G+ IH Y+
Sbjct: 206 NALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTVVCALSACGHMGMLQLGRWIHGYVYK 265
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
N + DSF+ LVD Y KCG + A ++FE + EK L +WN+M+ A+HG ++
Sbjct: 266 NGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTSWNSMINCFALHGQSDSAIAI 325
Query: 332 FSRMIEAR--IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F +M+E ++PD VT +G L C+H GLV++ F+ M YG+ +++HYGC+ DL
Sbjct: 326 FEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDL 385
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
LGRAG +EA++++K M M D VW LL GC++HG ++AE AA+ ++++ P +GG
Sbjct: 386 LGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLIEIDPHNGGYR 445
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+LA+VY +W++V + R+L K K GCS I+++
Sbjct: 446 IMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWIEVD 485
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/396 (38%), Positives = 241/396 (60%), Gaps = 4/396 (1%)
Query: 99 FSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV 158
+++M + + D ++ PF+L++C+ L + + +H Q L++G D +V SL+ +Y
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVK 154
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
+ DA++LFD+++ RD+ S N LI GY+K G++ A LF+RM R+ VSW +++GY
Sbjct: 155 CGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGY 214
Query: 219 AQSDQCEEAIQLFCNMMD--LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
Q+ E+A+ LF M+ ++KP+ + +VS L ACA+ LE+G+ IH + + +
Sbjct: 215 TQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHL 274
Query: 277 DSFLSTGLVDFYAKCGYINTAIEIFE--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
+S + T L YAKC + A F+ + KNL WN M+ A HG G ++ F
Sbjct: 275 NSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFEN 334
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M+ A ++PD VT +G L GCSH+GL+D F++M +++ V ++HY C+ DLLGRAG
Sbjct: 335 MLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAG 394
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLAD 454
+ EA E+I +MPM VW LL CR H N+EIAE AA + L+P++ G Y +L++
Sbjct: 395 RLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSN 454
Query: 455 VYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+YA A WE+V K+R L +KK+ GCS I++NG
Sbjct: 455 LYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEING 490
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 33/174 (18%)
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
++ + M L + DN L L +CA L + G+ +H + D ++ L+D
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 288 YAKCGY-------------------------------INTAIEIFESSQEKNLFTWNAML 316
Y KCG I A ++FE + +N+ +W AM+
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 317 VGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
G +G +L F M++ + +KP+ VTI+ L C+ + ++ R++ D
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHD 265
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 248/432 (57%), Gaps = 2/432 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
L A +F+ +P S+ T++ + A LF +M V + P+ + +
Sbjct: 194 LDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVS 253
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
A Q+ + +H V + G V + N+L+ ++ +R A+E+FD + +DV S
Sbjct: 254 AIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYS 313
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
++++ Y K GDL A QLF MP R+ VSW ++A Y+Q +Q EEA+ LF M+ +
Sbjct: 314 WTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGV 373
Query: 240 KPDNIALVSALSACARLGELEQGKNIHR-YIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
P + LVS LSACA+LG L+ G+ I+ YI N+I + L L+D +AKCG + A
Sbjct: 374 DPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEAS 433
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F+ E+N+ +WN M++ A+HG ++ F ++ I PD +T LG L CSH+G
Sbjct: 434 KLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSG 493
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV E R+ F EME Y + ++HY CM DLLG+ GL+EEA E+ + MPM D W L
Sbjct: 494 LVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGAL 553
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR+HGNVEI A+ +++L P D G+Y +++ +YA+ ++W+ V +R ++ +K
Sbjct: 554 LNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVK 613
Query: 479 KNAGCSLIQLNG 490
KN GCS I++ G
Sbjct: 614 KNPGCSSIEVEG 625
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 200/468 (42%), Gaps = 81/468 (17%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + ++ C + +++ Q+HA GL + + + S+P +
Sbjct: 38 LLSLLESCASFRRLLQLHALLTVTGL---------AAHRFPASRLLAFCALSTPPRLAHA 88
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
A+ + P P+ + T++R P A+ LF ++ +P D +F F ++A +
Sbjct: 89 AAILARAS-PGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAA 147
Query: 123 QLC------SHSLAQTIHSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
+ S + IH LK GF+ + V V N+L+H Y L DA ++FDE+ R
Sbjct: 148 AAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPER 207
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
DVVS TL+DGY +AG +EA +LFC M+
Sbjct: 208 DVVSWTTLVDGYARAG-------------------------------LADEAWRLFCRMV 236
Query: 236 DL-DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ ++P+ + LV+A+SA ++G L G +H+Y+ + L LVD + KCG +
Sbjct: 237 VVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCV 296
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHG-----------LGRLSLV------------- 330
A E+F+ + K++++W +M+ A G + R ++V
Sbjct: 297 RYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLN 356
Query: 331 -------YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
F MI A + P T++ L C+ G +D R +++ + +
Sbjct: 357 QPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLG 416
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ D+ + G + EA ++ +M +V W+ ++ +HG E A
Sbjct: 417 NALIDMFAKCGDVGEASKLFDEMAE-RNVVSWNTMIMAHAVHGQSEEA 463
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 269/480 (56%), Gaps = 43/480 (8%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
+I ++ QIHA + G+ +S + +++ + + P+ P+SYA +F+ I
Sbjct: 29 SITKLRQIHAFSIRHGV-SISDAELGKHLIFYLVSL--------PSPPPMSYAHKVFSKI 79
Query: 72 PYP-STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLCSHSL 129
P + F +NT+IR + + ++A L+ +MR + PD +++PFL++A + + L
Sbjct: 80 EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRL 139
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+TIHS V++ GF ++V NSL+H+Y
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLY-------------------------------AN 168
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD+A A ++FD+MP +D V+W +++ G+A++ + EEA+ L+ M IKPD +VS
Sbjct: 169 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSACA++G L GK +H Y+ + + S L+D YA+CG + A +F+ +KN
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGLVDEARKLFD 368
+W +++VGLA++G G+ ++ F M + P +T +G L CSH G+V E + F
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M Y + ++H+GCM DLL RAG +++A E IK MPM +V +W LLG C +HG+
Sbjct: 349 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 408
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
++AE A +++L+P G Y +L+++YA+ RW DV KIR+ + +KK G SL+++
Sbjct: 409 DLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 468
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 275/525 (52%), Gaps = 58/525 (11%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ R IK++ Q A + G P + T L A ++ P+ S L +A +
Sbjct: 6 LHRLSCIKELEQAQAFIVKAGFYNHIP---IITKLIAFSSLSPLGS--------LPHACA 54
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS---- 122
+F +F NT+IRA++ PL A++++++M+ + + D +++ F+LRAC+
Sbjct: 55 LFQETSMDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIK 114
Query: 123 ------QLCSHSL----AQTIHSQVLKLGFICDVFVLNSLMHVYC--------------- 157
Q H + IH+++LKLGF D V NSL+ VY
Sbjct: 115 CTEMDDQCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEM 174
Query: 158 -------------VFHRLRD---AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFD 201
++R+ D A L + + + VS NTL+ Y++ +L AR++F+
Sbjct: 175 TVKTAVSWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFE 234
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQ 261
MP RD VSW ++++GY + A+ LF +M +I+ + +S L ACA LG LE
Sbjct: 235 EMPERDVVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEI 294
Query: 262 GKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
GK IH ++ R++ +L +VD YAKCG + A+E+F + K + WNAM++GLA+
Sbjct: 295 GKKIHDSLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAV 354
Query: 322 HGLGRLSLVYFSRMI--EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
HG +L F M + KP+ +T + L+ CSH GL+ E R F M + Y + +
Sbjct: 355 HGHCERALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPD 414
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM 439
LKHYGCM DLL R G +EEA MIK P +W LLGGCR+H +VE+ E + +
Sbjct: 415 LKHYGCMIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLA 474
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+L+P G Y +L+++YA +RW+DV ++R+ + + K AG S
Sbjct: 475 ELEPGKDGDYVLLSNIYAEEERWDDVERLRKEMINYGVCKKAGSS 519
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 271/492 (55%), Gaps = 48/492 (9%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N +++C + QI Q+ A+ + G S L AI++F LS
Sbjct: 4 FNLLLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSF-----------GDLS 52
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS--IPPDFYSFPFLLRA 120
YAL IF IPYPST +N +IR L S P NAV + M + D + F L+A
Sbjct: 53 YALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKA 112
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ + S A +HSQ+L+ GF DV +
Sbjct: 113 CARALARSEAIQLHSQLLRFGFNADVLLQT------------------------------ 142
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
TL+D Y K GDL A++LFD MP D SW L+AG+AQ + +AI F M +D ++
Sbjct: 143 -TLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNL 201
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ + + AL AC++LG L++G+++H+YI ++ + + ++D YAKCG ++ A
Sbjct: 202 RPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYW 261
Query: 300 IFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE+ + +K+L TWN M++ AMHG G +L F ++ + + PD V+ L L C+HAG
Sbjct: 262 VFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAG 321
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV++ KLF+ M + G+ +KHYG M DLLGRAG ++EA +++ +P ++ +W L
Sbjct: 322 LVEDGLKLFNSM-TQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTL 379
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG CR +G+VE+AE A+ ++++ G + +L++VYA RW+DV ++R ++ +K
Sbjct: 380 LGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVK 439
Query: 479 KNAGCSLIQLNG 490
K G S I++ G
Sbjct: 440 KTPGFSYIEIKG 451
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 259/486 (53%), Gaps = 43/486 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +KRCK++++ Q+HAH L GL + S C ++S + + YA
Sbjct: 36 SLLKRCKSMEEFKQVHAHILKLGLFYDSFC-----------GSNLVASCALSRWGSMEYA 84
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SIF+ I P +F YNT+IR + A++L+ +M I PD +++PF+L+ACS L
Sbjct: 85 CSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLL 144
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ IH+ V K G DVFV N L I
Sbjct: 145 VALKEGVQIHAHVFKAGLEVDVFVQNGL-------------------------------I 173
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDN 243
Y K G + HA +F++M + SW +++ +A + E + L +M + + +
Sbjct: 174 SMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEE 233
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVSALSAC LG G+ IH + N ++ + T L+D Y KCG + + +F++
Sbjct: 234 SILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQN 293
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
KN +++ M+ GLA+HG GR ++ FS M+E + PD V +G L CSHAGLV+E
Sbjct: 294 MAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEG 353
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F+ M+ + + ++HYGCM DL+GRAG+++EA ++IK MP+ + VW LL C+
Sbjct: 354 LQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACK 413
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H N+EI E AAE++ +L + G Y VLA++YA A +W +V +IR + + + G
Sbjct: 414 VHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEMAEKHLVQTPGF 473
Query: 484 SLIQLN 489
SL++ N
Sbjct: 474 SLVEAN 479
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA--KCGYINTAIEIFESSQEK 307
LS R +E+ K +H +I + DSF + LV A + G + A IF +E
Sbjct: 35 LSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFSQIEEP 94
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
F +N M+ G +L+ + M+E I+PD T L CS + E ++
Sbjct: 95 GSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIH 154
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ G+ ++ + + G+ G IE A + ++M V WS ++G H +
Sbjct: 155 AHVFKA-GLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMD-EKSVASWSSIIGA---HAS 209
Query: 428 VEI 430
VE+
Sbjct: 210 VEM 212
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 241/429 (56%), Gaps = 2/429 (0%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
T + A +F+ I S+ T+I + A+ ++ M P+ L
Sbjct: 264 TGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNL 323
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ AC + + +H V+K GF C F+ ++++ Y + A F+ + +
Sbjct: 324 VSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHL 383
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
S N L G++K G + HA + FD+M RD SW T+++GYAQS+ + A++LF M+
Sbjct: 384 ESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAG 443
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
IKP+ + +VS SA A LG L++GK H Y+ I + L L+D YAKCG IN+A
Sbjct: 444 GIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSA 503
Query: 298 IEIFESSQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
++ F +++ ++ WNA++ GLA HG + L FS M IKP+ +T +G L C
Sbjct: 504 LQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACC 563
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAGLV+ +++F M+S Y V ++KHYGCM D+LGRAGL+EEA EMI+ MPM D+ +W
Sbjct: 564 HAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIW 623
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL CR HGNV I E AAE++ +L P GG +L+++YANA +WE+V +R +
Sbjct: 624 GTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQ 683
Query: 476 KIKKNAGCS 484
+ + G S
Sbjct: 684 TMDREPGYS 692
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 188/399 (47%), Gaps = 33/399 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P SY T+I A+ +F MR+ + P+ + ++ ACS
Sbjct: 138 ARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSH 197
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H V+K+ + V V +LMH YC+ +R+A+ LFDE+ R++V+ N +
Sbjct: 198 LGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVM 257
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
++GY K G + AR+LFD + +D +SWGT++ GY Q + EA++++ M+ P+
Sbjct: 258 LNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNE 317
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT------- 296
+ +V+ +SAC R + G +H + +F+ T ++ FYA CG ++
Sbjct: 318 VMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEV 377
Query: 297 ------------------------AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
A++ F+ +++F+W+ M+ G A +++L F
Sbjct: 378 GVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELF 437
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
+M+ IKP+ VT++ + G + E + + M S + + D+ +
Sbjct: 438 HKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRS-ESIPFNDNLRAALIDMYAK 496
Query: 393 AGLIEEALEMIKKM-PMGGDVFVWSGLLGGCRIHGNVEI 430
G I AL+ ++ V W+ ++ G HG+ +
Sbjct: 497 CGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASM 535
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 149/293 (50%), Gaps = 40/293 (13%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L++CS L S + IHS + KLG + F+ NSL+++Y +++AQ LFD D
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VSCN ++ GYV+ G + +AR+LFD MP + VS+ T++ G+ Q+ EA+++F +M
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC 179
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ P+++ LV+ +SAC+ LGE+ + +H + + +ST L+ Y C + A
Sbjct: 180 GVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREA 239
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+ E+NL TWN ML G A
Sbjct: 240 RRLFDEMPERNLVTWNVMLNGYA-----------------------------------KT 264
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
GLVDEAR+LFD + K++ +G M D + G + EALE+ + M G
Sbjct: 265 GLVDEARELFDGI-----CDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTG 312
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 102/261 (39%), Gaps = 73/261 (27%)
Query: 228 IQLFCNMMDLDIKPDN-IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
I +F N + D+ +ALVSAL +C+ L + QG+ IH I + ++F+ L++
Sbjct: 37 IHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLIN 96
Query: 287 FYAKCG-------------------------------YINTAIEIFESSQEKNLFTWNAM 315
YAKCG I+ A ++F+ K ++ M
Sbjct: 97 MYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTM 156
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL---------------- 359
++G +G R +L F M + P+ +T++ + CSH G
Sbjct: 157 IMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFV 216
Query: 360 -------------------VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
V EAR+LFDEM + L + M + + GL++EA
Sbjct: 217 VGLVIVSTNLMHAYCLCSGVREARRLFDEMP-----ERNLVTWNVMLNGYAKTGLVDEAR 271
Query: 401 EMIKKMPMGGDVFVWSGLLGG 421
E+ + DV W ++ G
Sbjct: 272 ELFDGI-CDKDVISWGTMIDG 291
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 261/484 (53%), Gaps = 44/484 (9%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C ++K++ +IHAH + GL H I + F IS + S L+YA
Sbjct: 10 LLQGCNSLKRLRKIHAHVIVSGL------HHHVPIANKLLNFCAISVSGS-----LAYAQ 58
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQL 124
+F+ + P T ++N+IIR SSP++A+V ++QM S PD ++F F+L+AC ++
Sbjct: 59 LLFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERI 118
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H V++ G+ DA DV+ C L+
Sbjct: 119 KAERKCKEVHGSVIRCGY---------------------DA----------DVIVCTNLV 147
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y G + ARQ+FD+MP RD V+W +++ ++Q +EA+Q + M ++ D
Sbjct: 148 KCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDIDGF 207
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
LV +S+CA LG L G +HR+ N + ++ L+D YAKCG ++ AI IF+
Sbjct: 208 TLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRM 267
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
Q K++FTWN+M+VG +HG G ++ F +M+EARI+P+ VT LG L GCSH GLV E
Sbjct: 268 QRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQGLVQEGV 327
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
K F+ M S + + E+KHYGC+ DL GRAG +++ALE++ D +W LLG C+I
Sbjct: 328 KYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSH-NDSVLWRILLGSCKI 386
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H NV I E A + +L G +LA +YA V ++R+ + + K G S
Sbjct: 387 HKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTTPGWS 446
Query: 485 LIQL 488
I++
Sbjct: 447 WIEI 450
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 248/432 (57%), Gaps = 18/432 (4%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P+T +N +IR + +P AV ++ M + PD ++ LL AC++ + +
Sbjct: 4 PTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGEQV 63
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H+ VL G+ +VFV SL+ Y + A+ +FD + R VVS N+++ GYV+ D
Sbjct: 64 HATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCADF 123
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
AR++FD MP R+ VSW T+VAG A++ + +A+ LF M ++ D +ALV+ALSAC
Sbjct: 124 DGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALSAC 183
Query: 254 ARLGELEQGKNIH-----RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
A LG+L+ G+ IH R++ N + L+ L+ YA CG ++ A ++F K+
Sbjct: 184 AELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKS 243
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK-----PDGVTILGALVGCSHAGLVDEA 363
+W +M++ A GLG+ +L F M+ +K PD +T +G L CSHAG VDE
Sbjct: 244 TVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEG 303
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++F M+ +G+S ++HYGCM DLL RAGL++EA +I+ MP+ + +W LLGGCR
Sbjct: 304 HQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGGCR 363
Query: 424 IHGNVEIAEAAAEHVMKLKPE-----DGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
IH N E+A KL PE G +L+++YA RW+DV+ +R+ + +K
Sbjct: 364 IHRNSELASQVEN---KLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMGVK 420
Query: 479 KNAGCSLIQLNG 490
K G S IQ+NG
Sbjct: 421 KPPGRSWIQING 432
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 137/341 (40%), Gaps = 55/341 (16%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS-----PTTDPLSY 63
R +K+ Q+HA L KG + S + T+++ + A P +S+
Sbjct: 53 RGGLVKEGEQVHATVLVKG--YCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSW 110
Query: 64 ---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
A +F+ +P + S+ T++ A++LF +MR +
Sbjct: 111 NSMLAGYVRCADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVE 170
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
D + L AC++L L + IH ++ FV R+ Q+
Sbjct: 171 LDQVALVAALSACAELGDLKLGRWIH------WYVQQRFV-------------ARNWQQ- 210
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
V N LI Y G L A Q+F +MP + VSW +++ +A+ +EA+
Sbjct: 211 ------PSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTVSWTSMIMAFAKQGLGKEAL 264
Query: 229 QLFCNMMDLDIK-----PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG 283
LF M+ +K PD I + L AC+ G +++G I ++ S G
Sbjct: 265 DLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGISPSIEHYG 324
Query: 284 -LVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMH 322
+VD ++ G ++ A + E+ N W A+L G +H
Sbjct: 325 CMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGGCRIH 365
>gi|357142899|ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 237/413 (57%), Gaps = 34/413 (8%)
Query: 108 PPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
PPD S F L +C++L H +A +HS ++LG DV+++N+ + Y + A+
Sbjct: 73 PPDHLSISFSLHSCTRLPCHPIASLLHSFAVRLGHAGDVYIVNAAVSAYFTAADVASAER 132
Query: 168 LF---------------------------------DEILYRDVVSCNTLIDGYVKAGDLA 194
LF D + R+VVS N ++ Y AG L+
Sbjct: 133 LFSDTSKDVADVVTWTTMVAGHARAGDVERARWFFDAMPERNVVSWNAMLGAYASAGMLS 192
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
AR+LFD M R+A +W ++V G QSD CEEA+++F +M+ + P+ LVS +SACA
Sbjct: 193 EARKLFDGMHSRNAATWSSMVTGLVQSDHCEEALRVFSDMVARGVVPNESILVSVISACA 252
Query: 255 RLGELEQGKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
+L LE G +H Y++ + L+T +VD Y KCG I+ AI +F + +N+++WN
Sbjct: 253 QLRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGCIHNAIRVFAAMPVRNIYSWN 312
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+M+ GLAM+G +L F +M A ++P+ +T +G L CSH+GLVDE R LF+ M +
Sbjct: 313 SMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGACSHSGLVDEGRWLFNRMVND 372
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+G+ +HYG M DLLGRAGL++EA++ +K MP+ +W L G C IHG VE+ E
Sbjct: 373 FGIQPVPEHYGLMVDLLGRAGLVKEAVDFVKNMPVEPHPGLWGALAGACNIHGEVELGEE 432
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
A+ +++L+P G Y +L+++Y + RWED+ +RR + K+ K G +++
Sbjct: 433 IAKKLIELEPRHGSRYILLSNIYGTSSRWEDMATVRRLIKERKVSKGTGNAVV 485
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 287/549 (52%), Gaps = 80/549 (14%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ +C I QIHA + CH L+ P AS T+ LS A++
Sbjct: 29 LHKCTNPNHIKQIHAQLIK--------CH-----LHQDPYIAPKLIASYSLTNNLSSAVN 75
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS---QMRTVSIPPDFYSFPFLLRACSQ 123
+FN +P P+ YN +IRA++L + N++ F +M + D +++PFLL+ C+
Sbjct: 76 VFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNG 135
Query: 124 LCSH-SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
S SL + +H+ V KLGF D+FV NSL+ YC + A ++F + RDVVS N+
Sbjct: 136 SSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNS 195
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI--- 239
++ G VK GDL A ++FD MP RD VSW T++ G+ ++ + ++A +LF M + DI
Sbjct: 196 MVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSW 255
Query: 240 -----------------------KPDNIAL-VSALSACARLGELEQGKNIHRYIELNQIR 275
N+ L + +S A G++++ N+ +E + +R
Sbjct: 256 STMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLR 315
Query: 276 V-------------------------DSFLST----------GLVDFYAKCGYINTAIEI 300
+ DSFL + +D YAKCG ++ A +
Sbjct: 316 LDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRV 375
Query: 301 FESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
F + EK+L +WN+M+ G +HG G S+ F+ M+ KPD T +G L C+HAGL
Sbjct: 376 FNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGL 435
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E R F M+ VYG+ +++HYGCM DLLGR G ++EA +++ MP + + LL
Sbjct: 436 VNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLL 495
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CR+H +V++A + ++++ KL P D G + +L+++YA + W +V K+R+ ++ +K
Sbjct: 496 GACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQK 555
Query: 480 NAGCSLIQL 488
+G S I++
Sbjct: 556 PSGVSSIEV 564
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 271/492 (55%), Gaps = 48/492 (9%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N +++C + QI Q+ A+ + G S L AI++F LS
Sbjct: 4 FNLLLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSF-----------GDLS 52
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS--IPPDFYSFPFLLRA 120
YAL IF IPYPST +N +IR L S P NAV + M + D + F L+A
Sbjct: 53 YALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKA 112
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ + S A +HSQ+L+ GF DV +
Sbjct: 113 CARALARSEAIQLHSQLLRFGFNADVLLQT------------------------------ 142
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
TL+D Y K GDL A++LFD MP D SW L+AG+AQ + +AI F M +D ++
Sbjct: 143 -TLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNL 201
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ + + AL AC++LG L++G+++H+YI ++ + + ++D YAKCG ++ A
Sbjct: 202 RPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYW 261
Query: 300 IFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE+ + +K+L TWN M++ AMHG G +L F ++ + + PD V+ L L C+HAG
Sbjct: 262 VFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAG 321
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV++ KLF+ M + G+ +KHYG M DLLGRAG ++EA +++ +P ++ +W L
Sbjct: 322 LVEDGLKLFNSM-TQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTL 379
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG CR +G+VE+AE A+ ++++ G + +L++VYA RW+DV ++R ++ +K
Sbjct: 380 LGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVK 439
Query: 479 KNAGCSLIQLNG 490
K G S I++ G
Sbjct: 440 KTPGFSYIEIKG 451
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 264/484 (54%), Gaps = 41/484 (8%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ +C ++K++ QI A + L + ILT ++ + T +PTT + YA
Sbjct: 33 LPKCTSLKELKQIQAFSIKTHLQ--NDLQILTKLINSCT--------QNPTTASMDYAHQ 82
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F IP P +N++ R ++ ++PL A+ LF + ++ PD Y+FP LL+AC +
Sbjct: 83 LFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKA 142
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H +KLG + +V +L+++Y + + AQ +FDEIL VVS N +I G
Sbjct: 143 FQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITG 202
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YA+S + EA+ LF + +KP+++ +
Sbjct: 203 -------------------------------YARSSRPNEALSLFRQLQARKLKPNDVTV 231
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S LS+CA LG L+ GK IH Y++ N + ++T L+D YAKCG ++ AI +FES
Sbjct: 232 LSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSV 291
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ W+AM+V AMHG G+ + F M A+++PD +T LG L CSH GLVDE +
Sbjct: 292 RDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRY 351
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M VYG+ +KHYGCM DLLGRAGL+ EA + I ++P+ +W LL C HG
Sbjct: 352 FYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHG 411
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N+E+A+ +++L GG Y +L+++ A A +WEDV +R+ + K GCS I
Sbjct: 412 NLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSI 471
Query: 487 QLNG 490
+++
Sbjct: 472 EVDN 475
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 249/419 (59%), Gaps = 7/419 (1%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNA---VVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P+ F YN +I+A++ S P + L+SQ+R P+ ++F FL AC+ L S SL
Sbjct: 9 PTLFLYNKLIQAYS--SHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSLSSSSLG 66
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
Q +H+ +K GF D+F +L+ +Y L A++LFDE+ R V N ++ G +
Sbjct: 67 QMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPRWNAMMAGLARF 126
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNIALVSA 249
GD+ A +LF MP R+ V W T+++GY+ + Q ++A+ LF M + I P+ + LVS
Sbjct: 127 GDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPNAVTLVSI 186
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF-ESSQEKN 308
L ACA L LE G+ + Y N + + S +++ Y KCG I+ A +F E +N
Sbjct: 187 LPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRVFNEIGSLRN 246
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
L +WN+M+VGLA+HG +L + +M+ PD VT +G L+ C+ G+V + R +F
Sbjct: 247 LCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVKKGRHIFK 306
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
+ + + +L+HYGCM DLLGRAG + EA E+I+ M M D +W LLG C HGNV
Sbjct: 307 SKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGACSFHGNV 366
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
E+AE AAE + L+P + G Y +L+++YA+A +W+ V K+R+ + KI K+AG S I+
Sbjct: 367 ELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIE 425
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 265/486 (54%), Gaps = 14/486 (2%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K C+++ + QI A F+T GL S H + L +F ISS + ++
Sbjct: 12 LKNCRSMSEFKQIQAFFITSGL---SQHHPFASRLL---SFSAISSWGD-----IDHSYR 60
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF IP P+ ++N+IIR + +P +V +F +M + PD ++PF+ +A ++L
Sbjct: 61 IFLQIPSPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFVAKAVARLSE 120
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
LA +H ++ K G D F+ NSL+H+Y + A+++FDE+L R+ VS N ++DG
Sbjct: 121 LRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDG 180
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K GDL A Q+F MP RD VSW +++ G + + A+ +F M + K + + +
Sbjct: 181 YAKCGDLDSAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTM 240
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES--S 304
VS L ACA LG LE G+ +H+Y+ N +R L T L+D YAKCG I AI +F
Sbjct: 241 VSVLCACAHLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPM 300
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+ ++ WN ++ GLA HGL SL F M I PD +T L C+H GLV EA
Sbjct: 301 DQTDVLMWNTIIGGLATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAW 360
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F + G+ + +HY CM D+L RAG + EA + I +MPM + LL GC
Sbjct: 361 HFFKSLGK-QGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMN 419
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H ++AE +++L+P+ G Y L++VYA W++ +R +++ +KK+ G S
Sbjct: 420 HRRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFS 479
Query: 485 LIQLNG 490
+++ G
Sbjct: 480 FVEVLG 485
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 252/431 (58%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + P + S+ +I ++ AV F+ M + I PD + LL A
Sbjct: 187 LDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSA 246
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVS 179
C+QL +++H V + G + ++ +L+ +Y + A E+FD + R S
Sbjct: 247 CAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQS 306
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N +IDGY K G + AR LFD+M RD V++ +L+ GY + EA+ LF M D+
Sbjct: 307 WNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDL 366
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ DN +VS L+ACA LG L QG+ +H IE + VD +L T L+D Y KCG + A
Sbjct: 367 RADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASL 426
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F++ +++ TW+AM+ GLA +G+G+ +L YF M +P+ VT + L CSH+ L
Sbjct: 427 VFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCL 486
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+DE R F+EM ++ + ++HYGCM DLLGR+GL++EA+++++ MPM + +W+ +L
Sbjct: 487 LDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASIL 546
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H + +A AAEH++KL+P++ VY L ++Y ++ +WED +IRR ++ +KK
Sbjct: 547 SACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKK 606
Query: 480 NAGCSLIQLNG 490
AG S I + G
Sbjct: 607 AAGYSSITVAG 617
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 232/471 (49%), Gaps = 56/471 (11%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPC--HILTTILYAITTFKPISSASSPTTDPL--SYALS 66
++++Q ++HA + G L P H+L ++ + F P TDPL YAL
Sbjct: 10 RSVRQAAELHAVLVASGRLLHPPSASHLLNSL---VNCFTP--------TDPLHLRYALC 58
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSS-PLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ +P STF ++T +RA SS P + ++L+ +MR + D ++F FL + C++
Sbjct: 59 LFDRMPC-STFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGR 117
Query: 126 SHSL-AQTIHSQVLKLGFICDV-FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+H L Q +H+ + V V N ++H+Y DA+ FD+I +D V+ T+
Sbjct: 118 AHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTV 177
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G K G L A L P R+ +SW L++GY+++ + EA+ F +M+ I+PD
Sbjct: 178 ISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDE 237
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++ LSACA+L +L G+++H+ + + + L L+D YAKCG I A E+F++
Sbjct: 238 VTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDA 297
Query: 304 --------------------------------SQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
++++L T+N+++ G G R +L+
Sbjct: 298 LGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLL 357
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F +M ++ D T++ L C+ G + + R L +E V ++ + D+
Sbjct: 358 FMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRL-VEVDIYLGTALLDMYL 416
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
+ G +EEA + + M + DV WS ++ G +G + +AA E+ +K
Sbjct: 417 KCGRVEEASLVFQAMSV-RDVHTWSAMIAGLAFNG---MGKAALEYFFWMK 463
>gi|326513504|dbj|BAJ87771.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524908|dbj|BAK04390.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 267/448 (59%), Gaps = 18/448 (4%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPST------FSYNTIIRAHTLFSSPLNAVVLFSQMRTV 105
+A SP D A + ++P+ S+ F YNT++R SSP +A+ LF+ MR
Sbjct: 54 AAVSPAGDLRQAAAILSAHLPFISSASSHPAFFYNTLMRGLAASSSPGDAIGLFAAMRRA 113
Query: 106 SIPPDFYSFPFLLRACSQLCS-HSLAQTIHSQVLKLGFICDV----FVLNSLMHVYCVFH 160
PD ++F F+L++CS+ S L +H+Q ++ G + ++ V N+L+H Y
Sbjct: 114 GAAPDAFTFTFVLKSCSRCPSGRRLPSDLHAQAIRHGCLGELSAHTHVHNALLHAYACRA 173
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
+ DA +F+EI RDVVS + L+ ++KA DL AR +FD+MP RD VSW +++ YA+
Sbjct: 174 AVDDACRVFEEIPVRDVVSFSGLLTAHLKANDLHAARLVFDQMPHRDVVSWTAMISAYAK 233
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
+ + +EA+ LF M ++PD + +VS +SAC LG+L G+ + R+I+ L
Sbjct: 234 ACRPQEALALFDAM---PMQPDEVTMVSIVSACTTLGDLATGERVRRHIDSLGFGWMVSL 290
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG-LGRLSLVYFSRMIEAR 339
L+D YAKCG + A +F+ ++L +WN ++ A HG L V++ + E
Sbjct: 291 RNALMDMYAKCGSLPEARALFDGMTVRSLASWNTLISAYASHGDLDNTIAVFYQMLAEGN 350
Query: 340 -IKPDGVTILGALVGCSHAGLVDEARKLFDEME-SVYG-VSKELKHYGCMADLLGRAGLI 396
+KPDGVT+L L+ +H G V+E R +F+ M+ +G V ++HYGC+ D+LGRAG +
Sbjct: 351 TVKPDGVTLLALLIAYTHKGCVEEGRAMFNAMQRGNFGKVELTVEHYGCVVDMLGRAGKL 410
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
EEA ++I++MP+ + +W LLG CR HG++++AE A + + L PE+GG Y +L+D+Y
Sbjct: 411 EEAYQVIEQMPIPSNAVIWGALLGACRTHGDIDMAERAVKELRNLNPEEGGYYILLSDMY 470
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCS 484
A+A R + +IR +++ ++K G S
Sbjct: 471 ASAGRIAEATEIRHAMNERGVQKTTGRS 498
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 247/466 (53%), Gaps = 68/466 (14%)
Query: 87 TLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDV 146
L +P +A+ FS M D +++ FL++A S + + +HS V+KLG + D
Sbjct: 416 ALGGAPRDALAAFSAMPRR----DSFTYSFLIKALS-AAGVAPVRAVHSHVVKLGSVEDT 470
Query: 147 FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT------------------------ 182
FV N+L+ Y DA+++FDE+ RDVVS NT
Sbjct: 471 FVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEK 530
Query: 183 -------LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY----------------- 218
++DGY KAG++ A +LF RMP R+ VSW T+V+GY
Sbjct: 531 DTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMP 590
Query: 219 --------------AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
AQ +EA +LF M + ++ D A+VS L+ACA G L GK
Sbjct: 591 SKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKR 650
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHG 323
IHRY+ + + + L+D + KCG +N A +F++ +K+ +WN+++ G AMHG
Sbjct: 651 IHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 710
Query: 324 LGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
G +L F++M + PD VT++ L C+H G VDE R+ F ME YG+ +++HY
Sbjct: 711 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHY 770
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKP 443
GCM DLLGR GLI+EA+++IK MP + +W LL CR+H NVE AE A + KL+P
Sbjct: 771 GCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQP 830
Query: 444 EDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ G Y VL+++YA A +W D+ K R + +K AG S ++LN
Sbjct: 831 SNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELN 876
>gi|357477477|ref|XP_003609024.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510079|gb|AES91221.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 544
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 284/538 (52%), Gaps = 65/538 (12%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + + ++ ++ Q+ A GL P LTT L + P + LS+A
Sbjct: 11 SLLNKLSSMSELKQLQAIITKSGLHSHIP---LTTKLIFFSALSPFGN--------LSHA 59
Query: 65 LSIF--NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
S+F ++I + F NT+IRA + PL A+++++QM ++ D Y+ F+L+ACS
Sbjct: 60 YSLFQHSSILIHNPFISNTMIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACS 119
Query: 123 Q------------------LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC------- 157
+ + ++ IH +V+K+GF D V NSL++ Y
Sbjct: 120 RAYKLIQESGSCDDDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSV 179
Query: 158 ---VFHRLRDAQ-----------------ELFDEILY----RDVVSCNTLIDGYVKAGDL 193
+F +++D EL D +L + V+S NTLI Y++ GD+
Sbjct: 180 ARYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDV 239
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
AR++F MP R+AVSW +++AG A++LF M + +KP + L+S L AC
Sbjct: 240 QAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGAC 299
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A G LE G I+ +++ + +++S+L LV+ Y KCG ++ A EIF + K + WN
Sbjct: 300 AETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWN 359
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEA---RIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
AM++GLA+HG F+ M E+ I+PD VT +G LV CSH GLVD+AR FD M
Sbjct: 360 AMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHM 419
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
Y + + KHYGCM DLL R GL+EEA ++I P V +W LLG CR N E+
Sbjct: 420 VKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTEL 479
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
AE + + + KLK G Y +L+++YA A RW++V ++R +D + + AG S I +
Sbjct: 480 AEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 537
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 295/554 (53%), Gaps = 73/554 (13%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + ++ C + Q HA LT G L SP + +L A+ + SA+
Sbjct: 12 TLLSRLRACSSASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAAD------ 65
Query: 62 SYALSIFNNIPYPST---FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+A S+F ++ ++ F +NT++R H +SP +++ FS+MR V++ PD Y+FP +L
Sbjct: 66 -HADSVFAHLAEEASRHAFPWNTLVRLHAA-ASPRRSLLYFSRMRRVAVAPDAYTFPAVL 123
Query: 119 RACSQLCSHSLAQTIHSQVLKLG-------------FIC-----------------DVFV 148
+AC + +H + ++ G F C D+
Sbjct: 124 KACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGVRDLVS 183
Query: 149 LNSLMHVYC----------VFHRLRD----------------------AQELFDEILYRD 176
NS++ Y +F +R A+ELFD++ RD
Sbjct: 184 WNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRD 243
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
+V N++IDGY + G + AR LF+ MP R+ +SW ++ GY + + EA++ F M+
Sbjct: 244 LVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLS 303
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
IKPD +A V A++ACA+LG LEQG+ +H Y+E ++ D + T L+D Y KCG ++
Sbjct: 304 CGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDL 363
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A IFES +K++ TWN M+VGL HG G ++ F++M R D +++L L C+H
Sbjct: 364 AKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTSCTH 423
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGLV E +F ME G+ +++HYG + DLLGRAG +++A I+ MPM +W
Sbjct: 424 AGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWG 483
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CR H VE+AE + E + L +D GVY +L+++YA+ W+DV +IR+ + A
Sbjct: 484 SLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEG 543
Query: 477 IKKNAGCSLIQLNG 490
+KKN G S+I+++G
Sbjct: 544 MKKNIGRSVIEVDG 557
>gi|242078691|ref|XP_002444114.1| hypothetical protein SORBIDRAFT_07g008510 [Sorghum bicolor]
gi|241940464|gb|EES13609.1| hypothetical protein SORBIDRAFT_07g008510 [Sorghum bicolor]
Length = 718
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 228/394 (57%), Gaps = 24/394 (6%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS----LAQTIH 134
++ +IRA + + P A+ L++ + + P ++ P LL++ + + LA T+H
Sbjct: 40 HDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAAPGVAVLALTVH 99
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVF-HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
+ +KLG V V N+L+ V+ F RL D L D + NTLI Y +AG +
Sbjct: 100 AHAVKLGLERFVLVSNALIRVHAGFLGRLADGLLLLRTAAAVDASTFNTLITAYARAGRV 159
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A AR LFD MP R+AVSW +V GY Q+ EA+Q+F M D++PD+ LV L+AC
Sbjct: 160 ADARALFDEMPVRNAVSWSAMVNGYVQAGDAREALQIFAQMQAEDVRPDDTVLVGVLAAC 219
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A+ G LEQGK +H Y++ + IR+ F T LVD Y+KCG + A+E+FE ++KN+ W
Sbjct: 220 AQHGALEQGKWVHGYLKAHGIRITVFFGTALVDMYSKCGEVQLAMEVFERMEDKNVLAWT 279
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
M+ LAMHG G +L+ F++M+ +GLVD+ R+LFD M
Sbjct: 280 TMIKSLAMHGRGSEALMLFTQMVS-------------------SGLVDKGRELFDSMVRK 320
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ +++HYGCM DLL R G ++EA EMI+KMPM D +W L+ GCR H NVE+AE
Sbjct: 321 YGIKPKIEHYGCMVDLLARNGFLDEAKEMIQKMPMKPDALIWGALMAGCRFHKNVELAEY 380
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
H + L+P+ G Y +LA++YA + D K
Sbjct: 381 VVRHWILLEPDKSGAYVLLANIYAASADGRDTYK 414
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 125/287 (43%), Gaps = 43/287 (14%)
Query: 18 QIHAHFLTK---GLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
++HA FL + GLL L T +TF + +A + ++ A ++F+ +P
Sbjct: 119 RVHAGFLGRLADGLLLLR-----TAAAVDASTFNTLITAYA-RAGRVADARALFDEMPVR 172
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
+ S++ ++ + A+ +F+QM+ + PD +L AC+Q + + +H
Sbjct: 173 NAVSWSAMVNGYVQAGDAREALQIFAQMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVH 232
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG-------- 186
+ G VF +L+ +Y ++ A E+F+ + ++V++ T+I
Sbjct: 233 GYLKAHGIRITVFFGTALVDMYSKCGEVQLAMEVFERMEDKNVLAWTTMIKSLAMHGRGS 292
Query: 187 --------YVKAGDLAHARQLFDRMPFRDAVS-----WGTLVAGYAQSDQCEEAIQLFCN 233
V +G + R+LFD M + + +G +V A++ +EA ++
Sbjct: 293 EALMLFTQMVSSGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLDEAKEMIQK 352
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
M +KPD AL+ G L G H+ +EL + V ++
Sbjct: 353 M---PMKPD--ALI--------WGALMAGCRFHKNVELAEYVVRHWI 386
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 261/484 (53%), Gaps = 44/484 (9%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C ++K++ +IHAH + GL H I + F IS + S L+YA
Sbjct: 10 LLQGCNSLKRLRKIHAHVIVSGL------HHHVPIANKLLNFCAISVSGS-----LAYAQ 58
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQL 124
+F+ + P T ++N+IIR SSP++A+V ++QM S PD ++F F+L+AC ++
Sbjct: 59 LLFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERI 118
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H V++ G+ DA DV+ C L+
Sbjct: 119 KAERKCKEVHGSVIRCGY---------------------DA----------DVIVCTNLV 147
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y G + ARQ+FD+MP RD V+W +++ ++Q +EA+Q + M ++ D
Sbjct: 148 KCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDVDGF 207
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
LV +S+CA LG L G +HR+ N + ++ L+D YAKCG ++ AI IF+
Sbjct: 208 TLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRM 267
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
Q K++FTWN+M+VG +HG G ++ F +M+EARI+P+ VT LG L GCSH GLV E
Sbjct: 268 QRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQGLVQEGV 327
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
K F+ M S + + E+KHYGC+ DL GRAG +++ALE++ D +W LLG C+I
Sbjct: 328 KYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSH-NDSVLWRILLGSCKI 386
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H NV I E A + +L G +LA +YA V ++R+ + + K G S
Sbjct: 387 HKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTTPGWS 446
Query: 485 LIQL 488
I++
Sbjct: 447 WIEI 450
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 228/390 (58%), Gaps = 32/390 (8%)
Query: 130 AQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
A ++H++ LK GF D+FV +L+ Y R A+ FDE RDV CN ++ YV
Sbjct: 58 AASLHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYV 117
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---------- 238
G++A AR++FD M RD VSW T++ GYA + + + A ++F M D D
Sbjct: 118 TRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSA 177
Query: 239 ---------------------IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
+ PD +VS LSAC+ +G L G +H+++E N + +D
Sbjct: 178 YTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELD 237
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
L T L+D YAKCG I ++ +F S K++ TW++M++GLA HG G +L FSRM+
Sbjct: 238 VKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLS 297
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
++P+ VT +G L+ C+H GLV + +K F M V+GV+ +++HYGCM DLLGR+G IE
Sbjct: 298 EGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIE 357
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
EA ++I+ MP D +W LLG CRI+ NVE+AE A + L P G Y +L+++YA
Sbjct: 358 EAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYA 417
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
A+ WE V ++RR+L +I++ G S I+
Sbjct: 418 QANSWEGVAEMRRTLRRERIQRIPGRSSIE 447
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 33/255 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN + FS+++++ A+T +A+ L+ +MR + PD + +L ACS
Sbjct: 156 AREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSD 215
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + ++ +H V G DV + L
Sbjct: 216 MGALAVGAEVHQFVESNGVELDVKL-------------------------------GTAL 244
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K GD+ ++ ++F MP +D ++W +++ G A +A+ LF M+ ++P+
Sbjct: 245 IDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNE 304
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
+ + L +C LG + GK + + G +VD + G+I A ++
Sbjct: 305 VTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIR 364
Query: 303 SSQ-EKNLFTWNAML 316
E + W A+L
Sbjct: 365 DMPFEPDAVIWRALL 379
>gi|357132191|ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Brachypodium distachyon]
Length = 656
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 241/433 (55%), Gaps = 15/433 (3%)
Query: 61 LSYALSIFNNIPYPSTFSY----NTIIRAHTLFSSPLNAVVLFSQMRT---VSIPPDFYS 113
+ A +F IP S+ + IRA + + V + +++ T V++ DF
Sbjct: 226 IDMAAEMFERIPERDVVSWLVMIDGYIRADCISEALRTYVAMMAEVDTRGNVALLVDFQ- 284
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
+AC++ + Q +H+ +LK GF +FV +L+H Y L A+ F
Sbjct: 285 -----KACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYGSCDLLDLAKMQFKLSD 339
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
+ S N + G V+ + ARQLFD MP +D +SW TL++GY QS + A+QLFC
Sbjct: 340 KSHIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCL 399
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M+ +KP++I L S LSA A G LEQG+ IH YI I + L GL+D YAKCG
Sbjct: 400 MLGAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTDNLIAGLIDMYAKCGS 459
Query: 294 INTAIEIFESSQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
+ A+ +F +EK +L WNAM+ LA+HG +SL FS++ + IKP+ +T +G L
Sbjct: 460 VADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSNIKPNSITYIGVL 519
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
C HAG+V E + F+ M YG+ +KHYGCM DLLGRAG +EEA +IK MP+ D
Sbjct: 520 NACCHAGMVTEGKHHFESMRREYGIPPTIKHYGCMVDLLGRAGYLEEAERLIKTMPVKSD 579
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
V +W +L R HGNV + E AAE + KL P G L ++YA+A RW +V +R+
Sbjct: 580 VVIWGSILAAARSHGNVALGEKAAEELAKLDPNHGASKVALCNIYADAGRWNNVSVVRKE 639
Query: 472 LDAGKIKKNAGCS 484
L +++ +G S
Sbjct: 640 LRYENLERLSGSS 652
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 189/408 (46%), Gaps = 42/408 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +A + +P T S+ T++ A +A+ +F M +PP+ + ++ A
Sbjct: 94 LDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVFRGMLAQDVPPNEVTLAGVITA 153
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ + + +H ++ G V V +L+H Y ++ A+ +F+ + ++ V+
Sbjct: 154 LARDWAPAPLGMVHGVSVQRGLDGFVIVATNLVHAYAAAAQVGFARAVFEWMPDKNTVTW 213
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDI 239
N +++GYVKAG + A ++F+R+P RD VSW ++ GY ++D EA++ + MM ++D
Sbjct: 214 NAMLNGYVKAGAIDMAAEMFERIPERDVVSWLVMIDGYIRADCISEALRTYVAMMAEVDT 273
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN---- 295
+ + LV ACAR + +G+ +H I + F+ L+ FY C ++
Sbjct: 274 RGNVALLVDFQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYGSCDLLDLAKM 333
Query: 296 ---------------------------TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
A ++F++ EK+ +W+ +L G G ++
Sbjct: 334 QFKLSDKSHIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMA 393
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKEL----KHYG 384
L F M+ A +KP+ +T+ L +++G +++ R + D Y +SK +
Sbjct: 394 LQLFCLMLGAGVKPNHITLASTLSAVANSGTLEQGRWIHD-----YIISKSIHLTDNLIA 448
Query: 385 CMADLLGRAGLIEEALEMIKKMPMG-GDVFVWSGLLGGCRIHGNVEIA 431
+ D+ + G + +A+ + + + W+ ++ IHG+ ++
Sbjct: 449 GLIDMYAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMS 496
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 122/254 (48%), Gaps = 26/254 (10%)
Query: 131 QTIHSQVLKLGF-ICDVFVLNSLMHVYCVF---HRLRDAQELFDEI--LYRDVVSCNTLI 184
+ +H+ K G + ++FV NSL+ Y H A LFDEI RD + NTL+
Sbjct: 26 EQLHALAAKSGLLVSNLFVRNSLLAFYSRLPSSHAPALAHHLFDEIPLALRDAAAHNTLL 85
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
+ G L HA+++ MP RD VS+ T++ A++ E+A+ +F M+ D+ P+ +
Sbjct: 86 AALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVFRGMLAQDVPPNEV 145
Query: 245 ALVSALSACAR------LGELEQGKNIHRYIELNQIRVDSF--LSTGLVDFYAKCGYINT 296
L ++A AR LG + G ++ R + D F ++T LV YA +
Sbjct: 146 TLAGVITALARDWAPAPLG-MVHGVSVQRGL-------DGFVIVATNLVHAYAAAAQVGF 197
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A +FE +KN TWNAML G G ++ F R+ E D V+ L + G
Sbjct: 198 ARAVFEWMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERIPER----DVVSWLVMIDGYIR 253
Query: 357 AGLVDEARKLFDEM 370
A + EA + + M
Sbjct: 254 ADCISEALRTYVAM 267
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 256/485 (52%), Gaps = 15/485 (3%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C T+ + Q+HA + GL P I + ++ + D +YA I
Sbjct: 41 QCATMAHLRQLHAALVKSGL-SKDP----------IAASRAVAFCAGEGRDA-AYAARIV 88
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
P P++F +NT IRA + P AV LF M PP+ +FP L A ++L
Sbjct: 89 RYHPRPNSFMWNTAIRALSDGPGPDAAVALFVDMLRSPTPPERRTFPSLFAAYARLGRAD 148
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H VLKLG D + N+ + +Y R +A LF + DVV+CN+ I
Sbjct: 149 DGAALHGMVLKLGLAGDAYTRNTTIAMYASSGRADEALALFGQCQVFDVVACNSAIVALS 208
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+AG + AR +FD MP R +W +V+ Y+++ + +A+ LF M ++P+ LVS
Sbjct: 209 RAGRVDEARAVFDGMPSRTVATWSAMVSAYSRAARFHDAVDLFSAMQVDGVEPNANVLVS 268
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L CA LG LEQG +H YI+ + +++ + LVD Y KCG I+ A ++F++S+ +
Sbjct: 269 VLGCCASLGALEQGAWVHAYIDKQDVGMNALVVIALVDMYCKCGSIHKARQVFDTSRSQG 328
Query: 309 LF---TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
L +WNAM++GLA HG + +L FS + ++PD VT + L+ H+G+ DEA+
Sbjct: 329 LAKLSSWNAMMLGLAAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYGHSGMADEAKA 388
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LF M YGV+ ++HYGC+ D L RAG + EA + I+ MPM D +W LL GCR+H
Sbjct: 389 LFASMAREYGVTPGIEHYGCLVDALARAGRLREAEDTIRAMPMKPDAAIWGALLSGCRLH 448
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+ E AA ++ P D G Y + A V A + +R + + K GCS+
Sbjct: 449 GDAEAGARAARGAVECDPRDSGAYVLAASVLARDGEVGRGLGVRGKMREEGVAKVPGCSM 508
Query: 486 IQLNG 490
I+++G
Sbjct: 509 IEVDG 513
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 242/397 (60%), Gaps = 1/397 (0%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ +F+ M + PD S + +CSQL + ++ H VL+ GF + N+L+
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+Y HR A +FD + + VV+ N+++ GYV+ G++ A + F+ MP ++ VSW T+
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
++G Q EEAI++FC+M + + D + ++S SAC LG L+ K I+ YIE N
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
I++D L T LVD +++CG +A+ IF S +++ W A + +AM G ++ F
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
MIE +KPDGV +GAL CSH GLV + +++F M ++GVS E HYGCM DLLGRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
GL+EEA+++I+ MPM + +W+ LL CR+ GNVE+A AAE + L PE G Y +L+
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+VYA+A RW D+ K+R S+ ++K G S IQ+ G
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 179/352 (50%), Gaps = 43/352 (12%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K CKTI ++ H +GL + ++TI + S T + LS+A
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLD-----NDVSTITKLVA-----RSCELGTRESLSFAKE 88
Query: 67 IF-NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F N+ Y + F YN++IR + A++LF +M I PD Y+FPF L AC++
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH ++K+G+ D+FV NSL+H Y L A+++FDE+ R+VVS ++I
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI- 207
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNI 244
GYA+ D ++A+ LF M+ D ++ P+++
Sbjct: 208 ------------------------------CGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V +SACA+L +LE G+ ++ +I + I V+ + + LVD Y KC I+ A +F+
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
NL NAM GL R +L F+ M+++ ++PD +++L A+ CS
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACS 122
A F +P + S+NTII S A+ +F M++ + D + + AC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + LA+ I+ + K G DV RL T
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDV--------------RLG-----------------TT 510
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D + + GD A +F+ + RD +W + A + E AI+LF +M++ +KPD
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 243 NIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+A V AL+AC+ G ++QGK I + ++L+ + + +VD + G + A+++
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 302 ES-SQEKNLFTWNAMLVGLAMHG 323
E E N WN++L + G
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQG 653
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 42/165 (25%)
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY---INTAIEIF 301
A S+L C + EL K HR + + D T LV + G ++ A E+F
Sbjct: 34 ATPSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVF 90
Query: 302 ESSQE-KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD----------------- 343
E+S+ F +N+++ G A GL +++ F RM+ + I PD
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 344 --GVTILGALVGCSHA----------------GLVDEARKLFDEM 370
G+ I G +V +A G +D ARK+FDEM
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEM 195
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 273/498 (54%), Gaps = 21/498 (4%)
Query: 1 MTLNNFIKRCKTIKQIHQ---IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPT 57
+T + + C T + +++ IH+H +GL I+ L IT + +S
Sbjct: 259 VTFVSLLNSCNTPEALNRGRRIHSHISERGL---ETDMIVANAL--ITMYCKCNS----- 308
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLF-----SSPLNAVVLFSQMRTVSIPPDFY 112
+ A IF+ + S++ +I + S L +MR + P+
Sbjct: 309 ---VQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKV 365
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
+F +LRAC+ + + IH+++ K+GF D + ++ ++Y + +A+++F ++
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
++VV+ + + Y+K GDL+ A ++F MP R+ VSW ++AGYAQ+ + +L
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLS 485
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
+M +PD + +++ L AC L LE+GK +H + D+ ++T L+ Y+KCG
Sbjct: 486 SMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCG 545
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
+ A +F+ ++ WNAML G HG G ++ F RM++ R+ P+ +T+ +
Sbjct: 546 QVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVIS 605
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
CS AGLV E R++F M+ + ++ +HYGCM DLLGRAG ++EA E I+ MP D+
Sbjct: 606 ACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDI 665
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
VW LLG C+ H NV++AE AA H+++L+P VY L+++YA A RW+D K+RR +
Sbjct: 666 SVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVM 725
Query: 473 DAGKIKKNAGCSLIQLNG 490
D +KK+ G S I+++G
Sbjct: 726 DDRGLKKDRGESSIEIDG 743
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 2/246 (0%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
D+ N+LI+ Y K D+A A Q+F RM RD V+W +++A YA ++ +A F M
Sbjct: 90 DIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT 149
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
D +I+P+ I +S L AC LE+G+ IH ++ + D ++T L+ Y+KCG I+
Sbjct: 150 DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A E+F E+N+ +W A++ A H + + +M++A I P+ VT + L C+
Sbjct: 210 VACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
++ R++ + S G+ ++ + + + ++EA E+ +M DV W
Sbjct: 270 TPEALNRGRRIHSHI-SERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK-RDVISW 327
Query: 416 SGLLGG 421
S ++ G
Sbjct: 328 SAMIAG 333
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 163/366 (44%), Gaps = 38/366 (10%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ ++ A +F + +++++I A+ + P A F +M +I P+ +F +L
Sbjct: 105 EDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSIL 164
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+AC+ + IH+ V +G DV V +L+ +Y
Sbjct: 165 KACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYS--------------------- 203
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
K G+++ A ++F +M R+ VSW ++ AQ + EA +L+ M+
Sbjct: 204 ----------KCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAG 253
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
I P+ + VS L++C L +G+ IH +I + D ++ L+ Y KC + A
Sbjct: 254 ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAR 313
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV-----YFSRMIEARIKPDGVTILGALVG 353
EIF+ ++++ +W+AM+ G A G + RM + P+ VT + L
Sbjct: 314 EIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRA 373
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C+ G +++ R++ E+ V G + + ++ + G I EA ++ KM +V
Sbjct: 374 CTAHGALEQGRQIHAELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVV 431
Query: 414 VWSGLL 419
W+ L
Sbjct: 432 AWTSFL 437
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 101/200 (50%), Gaps = 2/200 (1%)
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
++ + EAIQL + + ++ + CA+ E GK +H+ ++ + +D +
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
L L++FY+K + +A ++F +++ TW++M+ A + + F RM +A
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
I+P+ +T L L C++ ++++ RK+ ++++ G+ ++ + + + G I A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAM-GMETDVAVATALITMYSKCGEISVA 211
Query: 400 LEMIKKMPMGGDVFVWSGLL 419
E+ KM +V W+ ++
Sbjct: 212 CEVFHKMTE-RNVVSWTAII 230
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 230/382 (60%)
Query: 107 IPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
+ P+ ++ +++AC+ + S + H+ ++K+GF DV V +L+H+Y L DA
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
+FD++ R + N +I G+ + D+ A +LF M RD VSW ++AGYAQ+ +E
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
++ +F M +K D + S LSACA L LE G+ H Y+ + +D + + LVD
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVD 185
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAK G + A ++F+ ++N +WN+++ G A HG G +++ F +M++A IKP+ ++
Sbjct: 186 MYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEIS 245
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L CSH GLV+E R F+ M YG+ ++ HY CM DLLGRAG ++EA I M
Sbjct: 246 FVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGM 305
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
P+ DV VW LLG CRIHGN E+A+ AEH++ ++ + G+Y +L+++YA A +W+D
Sbjct: 306 PVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAA 365
Query: 467 KIRRSLDAGKIKKNAGCSLIQL 488
K+R+ + + K G S I++
Sbjct: 366 KVRKLMKDRGVMKQPGYSWIEV 387
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 169/401 (42%), Gaps = 56/401 (13%)
Query: 2 TLNNFIKRCKTIKQIHQ-IHAHFLTKGLLFLSPCHILTTILY----------AITTFKPI 50
TL+ +K C +I + Q AH + F S + T +++ A F +
Sbjct: 12 TLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKM 71
Query: 51 SSASSPTTDPL----------SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
S S+ T + + AL +F + S+ +I + ++ +F+
Sbjct: 72 SERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFN 131
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
QMR + D + +L AC+ L + L + H+ V++ GF D+ V ++L+ +Y
Sbjct: 132 QMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSG 191
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
+ DA ++FD++ R+ VS N++I G AQ
Sbjct: 192 SMEDACQVFDKMPQRNEVSWNSII-------------------------------TGCAQ 220
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN-QIRVDSF 279
+ +A+ LF M+ IKP+ I+ V LSAC+ G + +G+ + N I D
Sbjct: 221 HGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVS 280
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
T ++D + G ++ A E ++ W A+L +HG L+ ++
Sbjct: 281 HYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGM 340
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
++ G+ +L + + + AG D+A K+ M+ GV K+
Sbjct: 341 EVQIAGIYVLLSNIYAA-AGQWDDAAKVRKLMKD-RGVMKQ 379
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 35/245 (14%)
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M+ +KP+ L + + ACA + LEQGK H YI D + T LV YA+CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 294 INTAIEIFESSQEKNLFTWNAMLV-------------------------------GLAMH 322
+ A +F+ E++ TWNAM+ G A +
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G G SL F++M + +K D + L C+ ++ R+ F G + ++
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVV 179
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK-- 440
+ D+ ++G +E+A ++ KMP +V W+ ++ GC HG A E +++
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEV-SWNSIITGCAQHGRGNDAVLLFEQMLQAG 238
Query: 441 LKPED 445
+KP +
Sbjct: 239 IKPNE 243
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 284/526 (53%), Gaps = 46/526 (8%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ ++ C ++ + IH+ T+G L +P H L + I + + S T
Sbjct: 29 DHLLQCCTSLTTLKLIHSSLSTRGFLLHTP-HFLARL---IILYSKLGDLHSARTLFDHR 84
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+ P++F NT++RA+ A+ L+ M+ + + + +++PF+L+ C+
Sbjct: 85 HHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ +H QV++ GF D+FV +L+ +Y + DA E+FD +L RDVV +
Sbjct: 145 ELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAM 204
Query: 184 IDGYVKA-----------------------------------GD----LAHARQLFDRMP 204
I Y +A GD ++ AR +FDRM
Sbjct: 205 ITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRME 264
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
R+ +SW ++++GY Q+ + +A+ LF M + P+ + + +SAC+ LG G+
Sbjct: 265 ERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRK 324
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ--EKNLFTWNAMLVGLAMH 322
+H ++ +++ +D+ L ++D Y KCG ++TA+E+F + + E+++ +WN ++ G +H
Sbjct: 325 LHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVH 384
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G G+ +L FSRM ++P+ +T L CSHAGL+DE RK F +M + V E+KH
Sbjct: 385 GHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKH 443
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
Y CM D+LGRAG + EA +IKK+P VW LL CRIHGN E+ E AA ++ +L+
Sbjct: 444 YACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLE 503
Query: 443 PEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
PE G Y +++++YA +++W++V +R+++ + +KK A S+I+
Sbjct: 504 PEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEF 549
>gi|115441803|ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa Japonica Group]
Length = 589
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 294/554 (53%), Gaps = 73/554 (13%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + ++ C + Q HA LT G L SP + +L A+ + SA+
Sbjct: 12 TLLSRLRACSSASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAAD------ 65
Query: 62 SYALSIFNNIPYPST---FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+A S+F ++ ++ F +NT++R H +SP +++ FS+MR ++ PD Y+FP +L
Sbjct: 66 -HADSVFAHLAEEASRHAFPWNTLVRLHAA-ASPRRSLLYFSRMRRAAVAPDAYTFPAVL 123
Query: 119 RACSQLCSHSLAQTIHSQVLKLG-------------FIC-----------------DVFV 148
+AC + +H + ++ G F C D+
Sbjct: 124 KACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGVRDLVS 183
Query: 149 LNSLMHVYC----------VFHRLRD----------------------AQELFDEILYRD 176
NS++ Y +F +R A+ELFD++ RD
Sbjct: 184 WNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRD 243
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
+V N++IDGY + G + AR LF+ MP R+ +SW ++ GY + + EA++ F M+
Sbjct: 244 LVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLR 303
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
IKPD +A V A++ACA+LG LEQG+ +H Y+E ++ D + T L+D Y KCG ++
Sbjct: 304 CGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDL 363
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A IFES +K++ TWN M+VGL HG G ++ F++M R D ++IL L C+H
Sbjct: 364 AKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTH 423
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGLV E +F ME G+ +++HYG + DLLGRAG +++A I+ MPM +W
Sbjct: 424 AGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWG 483
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CR H VE+AE + E + L +D GVY +L+++YA+ W+DV +IR+ + A
Sbjct: 484 SLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEG 543
Query: 477 IKKNAGCSLIQLNG 490
+KKN G S+I+++G
Sbjct: 544 MKKNIGRSVIEVDG 557
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 269/486 (55%), Gaps = 16/486 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
FI ++ ++ QIHA L LL +L L+ + + + ++L
Sbjct: 33 FIDNSHSVDEVLQIHAAILRHNLLIHPRYPVLNLKLHR----------AYASHGKIRHSL 82
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
++F+ P F + I ++ A +L+ Q+ + I P+ ++F +L++CS
Sbjct: 83 ALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKS 142
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH+ VLK G D +V L+ +Y + AQ++FD + R +VS +I
Sbjct: 143 ----GKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 198
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNI 244
Y K G++ AR LFDRM RD VSW ++ GY+Q +A+ LF ++ D KPD I
Sbjct: 199 CYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEI 258
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ALSAC+++G LE G+ IH ++ ++IR++ + T L+D Y+KCG + A+ +F +
Sbjct: 259 TVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDT 318
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDEA 363
K++ WNAM+ G AMHG + +L F M ++P +T +G L C+HAGLV+E
Sbjct: 319 PRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEG 378
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++F+ M YG+ +++HYGC+ LLGRAG ++ A E+IK M M D +WS +LG C+
Sbjct: 379 IQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCK 438
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+HG + + AE+++ + G+Y +L+++YA +E V K+R + I K G
Sbjct: 439 LHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGI 498
Query: 484 SLIQLN 489
S I+++
Sbjct: 499 STIEID 504
>gi|125573086|gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japonica Group]
Length = 616
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 294/554 (53%), Gaps = 73/554 (13%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + ++ C + Q HA LT G L SP + +L A+ + SA+
Sbjct: 12 TLLSRLRACSSASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAAD------ 65
Query: 62 SYALSIFNNIPYPST---FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+A S+F ++ ++ F +NT++R H +SP +++ FS+MR ++ PD Y+FP +L
Sbjct: 66 -HADSVFAHLAEEASRHAFPWNTLVRLHAA-ASPRRSLLYFSRMRRAAVAPDAYTFPAVL 123
Query: 119 RACSQLCSHSLAQTIHSQVLKLG-------------FIC-----------------DVFV 148
+AC + +H + ++ G F C D+
Sbjct: 124 KACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGVRDLVS 183
Query: 149 LNSLMHVYC----------VFHRLRD----------------------AQELFDEILYRD 176
NS++ Y +F +R A+ELFD++ RD
Sbjct: 184 WNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRD 243
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
+V N++IDGY + G + AR LF+ MP R+ +SW ++ GY + + EA++ F M+
Sbjct: 244 LVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLR 303
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
IKPD +A V A++ACA+LG LEQG+ +H Y+E ++ D + T L+D Y KCG ++
Sbjct: 304 CGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDL 363
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A IFES +K++ TWN M+VGL HG G ++ F++M R D ++IL L C+H
Sbjct: 364 AKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTH 423
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGLV E +F ME G+ +++HYG + DLLGRAG +++A I+ MPM +W
Sbjct: 424 AGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWG 483
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CR H VE+AE + E + L +D GVY +L+++YA+ W+DV +IR+ + A
Sbjct: 484 SLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEG 543
Query: 477 IKKNAGCSLIQLNG 490
+KKN G S+I+++G
Sbjct: 544 MKKNIGRSVIEVDG 557
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 242/397 (60%), Gaps = 1/397 (0%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ +F+ M + PD S + +CSQL + ++ H VL+ GF + N+L+
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+Y HR A +FD + + VV+ N+++ GYV+ G++ A + F+ MP ++ VSW T+
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
++G Q EEAI++FC+M + + D + ++S SAC LG L+ K I+ YIE N
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
I++D L T LVD +++CG +A+ IF S +++ W A + +AM G ++ F
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
MIE +KPDGV +GAL CSH GLV + +++F M ++GVS E HYGCM DLLGRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
GL+EEA+++I+ MPM + +W+ LL CR+ GNVE+A AAE + L PE G Y +L+
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+VYA+A RW D+ K+R S+ ++K G S IQ+ G
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 179/352 (50%), Gaps = 43/352 (12%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K CKTI ++ H +GL + ++TI + S T + LS+A
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLD-----NDVSTITKLVA-----RSCELGTRESLSFAKE 88
Query: 67 IF-NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F N+ Y + F YN++IR + A++LF +M I PD Y+FPF L AC++
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH ++K+G+ D+FV NSL+H Y L A+++FDE+ R+VVS ++I
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI- 207
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNI 244
GYA+ D ++A+ LF M+ D ++ P+++
Sbjct: 208 ------------------------------CGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V +SACA+L +LE G+ ++ +I + I V+ + + LVD Y KC I+ A +F+
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
NL NAM GL R +L F+ M+++ ++PD +++L A+ CS
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACS 122
A F +P + S+NTII S A+ +F M++ + D + + AC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + LA+ I+ + K G DV RL T
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDV--------------RLG-----------------TT 510
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D + + GD A +F+ + RD +W + A + E AI+LF +M++ +KPD
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 243 NIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+A V AL+AC+ G ++QGK I + ++L+ + + +VD + G + A+++
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 302 ES-SQEKNLFTWNAMLVGLAMHG 323
E E N WN++L + G
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQG 653
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 42/172 (24%)
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY---INTAIEIF 301
A S+L C + EL K HR + + D T LV + G ++ A E+F
Sbjct: 34 ATPSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVF 90
Query: 302 ESSQE-KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD----------------- 343
E+S+ F +N+++ G A GL +++ F RM+ + I PD
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 344 --GVTILGALVGCSHA----------------GLVDEARKLFDEMESVYGVS 377
G+ I G +V +A G +D ARK+FDEM VS
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
>gi|326496937|dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/444 (35%), Positives = 253/444 (56%), Gaps = 35/444 (7%)
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
S S N+++RA + P +L + +PPD S F L +C++ S +A +H
Sbjct: 39 SCASVNSLLRAARI---PAAYALLLRFLLLHRLPPDHLSLSFSLHSCTRSPSLPVASLLH 95
Query: 135 SQVLKLGFICDVFVLNSLMHVYC----------VFHRLRD-------------------- 164
S ++LG DV+VL++ + Y +F +D
Sbjct: 96 SFAVRLGHARDVYVLSAAVSAYFRATDVASAERLFSYTKDVADVVTWTTMVTGHANTGDL 155
Query: 165 --AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
A+ FD + R+VVS N ++ Y AG L+ AR+LFD MP R+A SW ++V G +S+
Sbjct: 156 ERARWFFDAMPERNVVSWNAMLGAYASAGMLSKARKLFDIMPSRNAASWSSMVTGLVRSN 215
Query: 223 QCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
+CEEA+++F M+ + + P+ ALVSA+SAC+ L LE G +H Y + + L+T
Sbjct: 216 RCEEALRVFSEMIGMGVVPNESALVSAVSACSLLRSLEHGVWVHAYAKRELQGMSLVLAT 275
Query: 283 GLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKP 342
+VD Y KCG I+ A+ +F + KN+++WN+M+ GLAM+G +L F +M A ++P
Sbjct: 276 AIVDMYGKCGGIHNAVRVFAAMPVKNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVRP 335
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
+ +T +G L CSH+GLVDE R LF+ M + +G+ +HYG M DLLGRAG + EA++
Sbjct: 336 NDITFIGLLGACSHSGLVDEGRWLFNMMVNGFGIQPVQEHYGLMVDLLGRAGHVREAVDF 395
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRW 462
+ MP+ +W L G C+IHG VE+ E A+ +++L+P G Y +L+++Y ++RW
Sbjct: 396 VNSMPVEPHPGLWGALAGACKIHGEVELGEEIAKKLIELEPRHGSRYILLSNIYGASNRW 455
Query: 463 EDVVKIRRSLDAGKIKKNAGCSLI 486
+D+ +RR L K+ K G +++
Sbjct: 456 DDMATVRRLLKDRKVPKGTGNAMV 479
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 275/502 (54%), Gaps = 28/502 (5%)
Query: 3 LNNFIK----RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
LN FI + + + + Q+ + + GL S H L L T + +
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGL---SHSHFLCFKLLRFCTLRLCN------- 72
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV---SIP-PDFYSF 114
LSYA IF+ +P+T Y ++ A++ S PL+A FS R + S+P P+ + +
Sbjct: 73 --LSYARFIFDRFSFPNTHLYAAVLTAYSS-SLPLHASSAFSFFRLMVNRSVPRPNHFIY 129
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC--VFHRLRDAQELFDEI 172
P +L++ L S +H+ + K GF V V +L+H Y V H + A++LFDE+
Sbjct: 130 PLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSH-ITLARQLFDEM 188
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
R+VVS ++ GY ++GD+++A LF+ MP RD SW ++A Q+ EA+ LF
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 233 NMM-DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M+ + I+P+ + +V LSACA+ G L+ K IH + + D F+S LVD Y KC
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC 308
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI---KPDGVTIL 348
G + A +F+ + +K+L WN+M+ A+HG ++ F M++ I KPD +T +
Sbjct: 309 GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L C+H GLV + R FD M + +G+ ++HYGC+ DLLGRAG +EALE++ M M
Sbjct: 369 GLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKM 428
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D +W LL C+IHG++++AE A ++++ L P +GG ++A++Y WE+ +
Sbjct: 429 KADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRA 488
Query: 469 RRSLDAGKIKKNAGCSLIQLNG 490
R+ + K G S I+++
Sbjct: 489 RKMIKHQNAYKPPGWSRIEIDN 510
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 266/487 (54%), Gaps = 45/487 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C +++++H+IHAH L G +P +I + F +S + S L+YA
Sbjct: 28 SLLQGCNSMRKLHKIHAHILINGYQH-NP-----SISEKLLNFCAVSVSGS-----LAYA 76
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLN--AVVLFSQMRTVS-IPPDFYSFPFLLRAC 121
+F+ I P T ++N++IR + SPL A+V ++ M + S PD Y+F FLL+AC
Sbjct: 77 QLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKAC 136
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + +H +++ G+ +DVV C
Sbjct: 137 EEAKEEGKCREVHGFIIRFGYD-------------------------------QDVVLCT 165
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
LI Y G + A ++F+ MP RD VSW ++++ Y Q+ EEA++++ M ++
Sbjct: 166 NLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGF 225
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D LVS LS+CA +G L G +HR+ ++ + F+ L+D YAKCG + +A+ IF
Sbjct: 226 DGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIF 285
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
S ++++FTWN+M+VG +HG G ++ +F M+ A ++P+ +T LG L GCSH GLV
Sbjct: 286 NSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVK 345
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E + F M S + + +KHYGCM DL GRAG ++EALE+I+ P D +W LLG
Sbjct: 346 EGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGS 405
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C+IH NVEI E A ++++L G +L+ +YA A + V ++R+ + + IK
Sbjct: 406 CKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTP 465
Query: 482 GCSLIQL 488
G S I++
Sbjct: 466 GWSWIEV 472
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 262/486 (53%), Gaps = 17/486 (3%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + C T ++ ++HA + KGL YA + L ++
Sbjct: 29 SLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYA-------------ASGRLDHS 75
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
L++ P+T Y + I AH+ L + L S M + + P ++ L AC L
Sbjct: 76 LTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGL 135
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
SL + +H+ KL D +V +L+ +Y A+ LFDE+ VVS ++
Sbjct: 136 ---SLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAML 192
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y G L AR+LFD +P +D + W ++ GY Q + EA+QLF M+ +PD +
Sbjct: 193 TCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEV 252
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+V LSA A+LG +E GK +H Y++ ++ ++++ ++T LVD Y KCG + A+ +F
Sbjct: 253 TVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHG 312
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K++ WNAM+ G AMHG R +L F ++ + + P +T +G L CSH+GLV+E
Sbjct: 313 IGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEG 372
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R F ME YG+ +++HYGCM DLLGRAGLIEEA +++ + + D +W LL CR
Sbjct: 373 RSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACR 432
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H N+ + + A+ ++ + G+Y +L+++YA +WE+V ++R + A I+K GC
Sbjct: 433 LHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGC 492
Query: 484 SLIQLN 489
S I+++
Sbjct: 493 SAIEID 498
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 261/500 (52%), Gaps = 53/500 (10%)
Query: 2 TLNNFIKRCKTI---KQIHQIHAHFLTKGLLFLSPCHILTTILYAITT---FKPISSASS 55
T +K C + ++ QIH H L GL H +YA + + + S
Sbjct: 134 TFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKS 193
Query: 56 PTTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
D +S+ A +F IP S+N +I + A+ F
Sbjct: 194 SLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQ 253
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
+M+ ++ P+ + +L AC+Q S L + S + G ++ ++N+L
Sbjct: 254 EMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNAL-------- 305
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
ID Y K GDL AR LF+ + +D +SW ++ GY+
Sbjct: 306 -----------------------IDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV-DSF 279
+ +EA+ LF M +++P+++ VS L ACA LG L+ GK IH YI+ + + ++
Sbjct: 343 MNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
L T L+D YAKCG I A ++F + K+L +WNAM+ GLAMHG ++L F +M +
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+PD +T +G L CSHAGLV+ R+ F M Y +S +L+HYGCM DLLGRAGL +EA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANA 459
++K M M D +W LLG CR+HGNVE+ E AA+H+ +L+PE+ G Y +L+++YA A
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Query: 460 DRWEDVVKIRRSLDAGKIKK 479
RW+DV +IR L+ +KK
Sbjct: 583 GRWDDVARIRTKLNDKGMKK 602
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 231/426 (54%), Gaps = 12/426 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ CK+ + + QIH+ + GL H L + F IS + LSYAL
Sbjct: 38 LLSTCKSFQNLKQIHSQIIKTGL------HNTQFALSKLIEFCAISPFGN-----LSYAL 86
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F +I P+ F +NT+IR ++L SSP+ A+ + +M + P+ Y+FPFLL++C+++
Sbjct: 87 LLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVG 146
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + IH VLKLG D FV SL+++Y L A+ +F + RD VS LI
Sbjct: 147 ATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALIT 206
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY G L AR+LF+ +P RDAVSW ++AGYAQS + EEA+ F M ++ P+
Sbjct: 207 GYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNEST 266
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V+ LSACA+ G LE G + +IE + + + L L+D Y+KCG ++ A ++FE
Sbjct: 267 MVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
EK++ +WN M+ G + + +L F +M ++ ++P+ VT + L C++ G +D +
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+ ++ + + + D+ + G IE A ++ M + W+ ++ G +H
Sbjct: 387 IHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK-PKSLGSWNAMISGLAMH 445
Query: 426 GNVEIA 431
G+ +A
Sbjct: 446 GHANMA 451
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 266/487 (54%), Gaps = 45/487 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C +++++H+IHAH L G +P +I + F +S + S L+YA
Sbjct: 10 SLLQGCNSMRKLHKIHAHILINGYQH-NP-----SISEKLLNFCAVSVSGS-----LAYA 58
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLN--AVVLFSQMRTVS-IPPDFYSFPFLLRAC 121
+F+ I P T ++N++IR + SPL A+V ++ M + S PD Y+F FLL+AC
Sbjct: 59 QLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKAC 118
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + +H +++ G+ +DVV C
Sbjct: 119 EEAKEEGKCREVHGFIIRFGYD-------------------------------QDVVLCT 147
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
LI Y G + A ++F+ MP RD VSW ++++ Y Q+ EEA++++ M ++
Sbjct: 148 NLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGF 207
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D LVS LS+CA +G L G +HR+ ++ + F+ L+D YAKCG + +A+ IF
Sbjct: 208 DGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIF 267
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
S ++++FTWN+M+VG +HG G ++ +F M+ A ++P+ +T LG L GCSH GLV
Sbjct: 268 NSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVK 327
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E + F M S + + +KHYGCM DL GRAG ++EALE+I+ P D +W LLG
Sbjct: 328 EGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGS 387
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C+IH NVEI E A ++++L G +L+ +YA A + V ++R+ + + IK
Sbjct: 388 CKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTP 447
Query: 482 GCSLIQL 488
G S I++
Sbjct: 448 GWSWIEV 454
>gi|357153087|ref|XP_003576334.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 531
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 273/529 (51%), Gaps = 65/529 (12%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+ + R + HQ+HA GLL L A+ + P SSAS+ L+
Sbjct: 19 SRLLPRRGSAAAGHQLHAVLFKHGLLHH------PAFLRALLSRLPPSSAST-----LAL 67
Query: 64 ALSIFNNIPYPSTFS---YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS PS S Y+ I A P ++ +F+++ +S+P +FP LL++
Sbjct: 68 LLSA-----APSALSPPLYSPAISALASSPCPAASLAVFNRVSRLSLPTPLPAFPALLKS 122
Query: 121 CSQ---LCSH---------SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
C++ LC+ S +H +VLKLG D +V N+L+ +Y RL DA+++
Sbjct: 123 CARAFGLCAAADGGGEGFVSKGMELHGRVLKLGCGGDRYVQNALVSMYGKLGRLGDARKV 182
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDL-----------------------AHAR-------- 197
FD + R+ VS N L+ + GDL HAR
Sbjct: 183 FDGMPARNAVSWNALVAAHGATGDLHGVELLSREMPERSVSWWNAEITRHARVGDMEAAA 242
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
++F MP RDAVSW +L+ GY + + +A+++F M D ++P + LVS L ACA +G
Sbjct: 243 RVFREMPGRDAVSWNSLIGGYTKLGRYVQALEVFREMQDSGVEPTELTLVSVLGACAEIG 302
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
ELE GK +H YI + D ++ LVD YAKCG + A ++FES +++ WNAM+V
Sbjct: 303 ELELGKGVHGYIGSKGVVADGYVGNALVDMYAKCGSLELARQLFESMSTRDITCWNAMIV 362
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
G ++HG R +L F M R++PD VT LG L+ CSH GLVDE R F M Y +
Sbjct: 363 GFSVHGYSRKALELFDAM---RVEPDHVTFLGVLIACSHGGLVDEGRVYFRSMTEDYKIV 419
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+KHYGCM D+L R G + EA +MI MP+ + +W +L CR+HG++++A A
Sbjct: 420 PGVKHYGCMVDMLCRCGKVAEAYQMINHMPVKANCVLWKMVLAACRVHGHIDLANKAFHE 479
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+ +L P D G +++VYA A RW+ V +R + + K+A S +
Sbjct: 480 LHQLMPIDDGDVITVSNVYAEAKRWDVVEHLRTKVIEPGVWKHAAHSQV 528
>gi|125542569|gb|EAY88708.1| hypothetical protein OsI_10183 [Oryza sativa Indica Group]
Length = 510
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 265/449 (59%), Gaps = 20/449 (4%)
Query: 52 SASSPTTDPLSYALSIFN-NIPYPST------FSYNTIIRAHTLFSSPLNAVVLFSQMRT 104
+A SP D L +A ++ + ++P+ S+ F YNT++R SSP A+ LF+ MR
Sbjct: 56 AAVSPAGD-LRHAAALLSLHLPFLSSASSHLAFFYNTLMRGLAASSSPAAAIELFAAMRR 114
Query: 105 VSIPPDFYSFPFLLRACSQLCSHS-LAQTIHSQVLKLGFI----CDVFVLNSLMHVYCVF 159
PD ++F F L++CS+ S L +H+Q +K G + V V N+L+H Y
Sbjct: 115 AGAAPDAFTFTFALKSCSRCVSQRRLPSDLHAQAIKHGCLGAGSSHVHVHNALLHGYSSR 174
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
+ DA+ +FDE+ RDV+S + L+ ++KA DL AR +FD+MP RD VSW +++ YA
Sbjct: 175 AAVGDARRVFDEMPARDVISFSGLLTLHLKANDLDAARVVFDQMPHRDVVSWTAMISAYA 234
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
++ + EA+ LF M ++PD + ++S +SAC LG+L G+ + +Y++ N
Sbjct: 235 RARRPREALALFDAM---PVQPDEVTMLSVVSACTALGDLATGERVCQYVDSNGFGWMVS 291
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-- 337
L L+D YAKCG + A +F+ ++L +WN + A HG ++ F RM+
Sbjct: 292 LRNALMDMYAKCGSLTEARNLFDGMTVRSLASWNTFISAYASHGDVESTVALFHRMLADG 351
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES-VYG-VSKELKHYGCMADLLGRAGL 395
+KPDG T+L L +H G V+E R +F+ + S YG V ++HYGCM DLLGRAG
Sbjct: 352 KSVKPDGTTLLAVLTAYAHKGFVEEGRAMFNAILSGNYGKVDLTIEHYGCMVDLLGRAGQ 411
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+EEA +MI++MP+ + VW LLG CR HG++ +AE A + + L PE+GG Y +L+D+
Sbjct: 412 LEEAYKMIEQMPIPSNSVVWGALLGACRTHGDINMAERAVQKLRSLNPEEGGYYILLSDM 471
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCS 484
YA + R + ++IRR ++ +K AG S
Sbjct: 472 YAASGRTTEAMEIRRIMNQAGAQKTAGQS 500
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 253/470 (53%), Gaps = 45/470 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
+S + F+ IP +++N++I A+ A+ F Q+ VS I PDFY+FP +L+
Sbjct: 67 VSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLK 126
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC L + IH KLGF +VFV SL+H+Y F A+ LFD++ +RD+ S
Sbjct: 127 ACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 183
Query: 180 CNTLIDGYVKAGDLAHARQLFDRM------------------------------------ 203
N +I G ++ G+ A A + D M
Sbjct: 184 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVF 243
Query: 204 ---PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPDNIALVSALSACARLGEL 259
P +D +SW TL+ GYAQ+ EAI+++ M + +I P+ VS L A A +G L
Sbjct: 244 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 303
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
+QG IH + + +D F++T L+D Y KCG + A+ +F +++ TWNA++
Sbjct: 304 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 363
Query: 320 AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
+HG +L F M++ +KPD VT + L CSH+G V+E + F M+ YG+
Sbjct: 364 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPS 422
Query: 380 LKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM 439
LKHYGCM DLLGRAG +E A + IK MP+ D +W LLG CRIHGN+E+ + A++ +
Sbjct: 423 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 482
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
++ ++ G Y +L+++YAN +WE V K+R +KK G S I++N
Sbjct: 483 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVN 532
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 27/265 (10%)
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKP 241
L++ Y GD++ +R FD++P +D +W ++++ Y + EAI F ++ + +I+P
Sbjct: 57 LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 116
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D L AC G L G+ IH + + + F++ L+ Y++ G+ A +F
Sbjct: 117 DFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 173
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV----GCSHA 357
+ +++ +WNAM+ GL +G +L M IK + VT++ L +
Sbjct: 174 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKL 233
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF---- 413
GL+D A K+F+ + K++ + + + GL EA+E+ K M ++
Sbjct: 234 GLLDSAHKVFEIIP-----VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 288
Query: 414 VWSGLL----------GGCRIHGNV 428
W +L G +IHG V
Sbjct: 289 TWVSILPAYAHVGALQQGMKIHGRV 313
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL-VYFSRMIE 337
F+ST LV+ YA G ++ + F+ +K+++ WN+M+ +G ++ ++ ++
Sbjct: 52 FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLV 111
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
+ I+PD T L C G + + RK+ + G + + + R G
Sbjct: 112 SEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKL-GFQWNVFVAASLIHMYSRFGFTG 167
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
A + MP D+ W+ ++ G +GN A
Sbjct: 168 IARSLFDDMPF-RDMGSWNAMISGLIQNGNAAQA 200
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/490 (33%), Positives = 262/490 (53%), Gaps = 24/490 (4%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I K+ + QIHA L +GL + I FK S +S L +++
Sbjct: 29 LIDNSKSTHHLLQIHAALLRRGLHH-----------HPILNFKLQRSYAS--LGHLHHSV 75
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
++F+ P P+ F + II AH F +A+ +SQM T I P+ ++ LL+AC+
Sbjct: 76 TLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTL-- 133
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
A+ +HS +K G ++V L+ Y + AQ+LFD + R +VS ++
Sbjct: 134 --HPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLT 191
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF-------CNMMDLD 238
Y K G L AR LF+ M +D V W ++ GYAQ EA+ F +
Sbjct: 192 CYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGK 251
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++P+ I +V+ LS+C ++G LE GK +H Y+E N I+V+ + T LVD Y KCG + A
Sbjct: 252 VRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDAR 311
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F+ + K++ WN+M++G +HG +L F M +KP +T + L C+HAG
Sbjct: 312 KVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAG 371
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV + ++FD M+ YG+ +++HYGCM +LLGRAG ++EA ++++ M + D +W L
Sbjct: 372 LVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTL 431
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CRIH NV + E AE ++ G Y +L+++YA A W V K+R + ++
Sbjct: 432 LWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVE 491
Query: 479 KNAGCSLIQL 488
K GCS I++
Sbjct: 492 KEPGCSSIEV 501
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 270/509 (53%), Gaps = 44/509 (8%)
Query: 11 KTIKQIHQIHAHFLTKGLLF-LSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
+ + + QIH + + KG+ L P L +L + +F + YA +F+
Sbjct: 8 RNPRSLKQIHGNLVVKGITSRLQPLREL--LLACVASF----------NGGMDYARKVFD 55
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
I +P F +N ++R + ++P A VL+ ++ + PD ++F +LLRAC+ L
Sbjct: 56 GISHPDLFMHNVMVRGYAHSAAPAAAFVLYRRIEAARLKPDSFTFCYLLRACAGLPGSCA 115
Query: 130 AQTIHSQVLKLGFICDVFVLNSL--MHVYC----VFHRLRD------------------- 164
+H V+KLG+ D FV N+L MH C V L D
Sbjct: 116 GYQVHGAVVKLGYFKDAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAA 175
Query: 165 ------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
A++LFDE ++D+V N ++ Y K G++ AR L DR P +D VSW T++ GY
Sbjct: 176 KGELDIARQLFDECQHKDLVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSWNTIITGY 235
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
+EA+++ M + + PD +VS LS CA LG L G+ IH + +
Sbjct: 236 TAKGLLKEALEVLDEMRCVGLMPDEATIVSLLSCCANLGSLGTGRMIHSLHLEGRPCISI 295
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
LV YAKCG + A+E+F +E++++TWN+++ GLA HG S+ +F++M++
Sbjct: 296 LPGNALVSMYAKCGDVQAAMEVFSRMKERDVWTWNSIIGGLAFHGQAEQSVQFFNKMLDE 355
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEE 398
+ P+ ++ L L CSHAGLV++ ++ F M + Y + +HY C+ D+LGR+GL++E
Sbjct: 356 GLCPNEISFLCVLGACSHAGLVEDGQRYFSLMINRYRIEPNARHYSCIVDMLGRSGLLDE 415
Query: 399 ALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYAN 458
A ++ M V +W LLG CRIHG+V + + A E ++K+ + G Y +L+ +YA+
Sbjct: 416 AFAIVSSMRCEPAVVIWRTLLGACRIHGDVALGKLARERLLKMNEDASGDYVLLSGIYAS 475
Query: 459 ADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
D W V +R S+D I+K AG + ++
Sbjct: 476 CDEWFGVETVRGSMDERGIRKVAGYAQVE 504
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 258/441 (58%), Gaps = 19/441 (4%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
+ A +F+ IP S+N +I ++ +A+ +F +MR S + D + L
Sbjct: 165 MEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLS 224
Query: 120 ACSQLCSHSLAQTIHSQV-------LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
ACS L + + + IH V K+G N+L+ +YC + A+ +FDE+
Sbjct: 225 ACSVLRNQEVGEEIHRYVDAELEMTTKIG--------NALLDMYCKCGCVDKARAIFDEM 276
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
++V+ +++ GY G L AR+LF+R P RD V W ++ GY Q + +EA++LF
Sbjct: 277 GNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFR 336
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M ++PDN LV+ L CA+ G LEQGK +H YI N I +D + T LVD YAKCG
Sbjct: 337 KMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKCG 396
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
+ A+E+F +E++ +W +++ GLA++G+ +L +FS+M EA +PD +T +G L
Sbjct: 397 CVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLT 456
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM-GGD 411
C+H GLV+E R+ FD M Y + + +HY C+ DLL RAGL++EA +++ +P+ D
Sbjct: 457 ACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIPIESSD 516
Query: 412 VFV--WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
+ V + LL CR +GN++++E + +++ +D V+ +LA VYA+A+RWEDV +R
Sbjct: 517 IVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASANRWEDVTTVR 576
Query: 470 RSLDAGKIKKNAGCSLIQLNG 490
R + I+K GCS I++NG
Sbjct: 577 RKMKELGIRKFPGCSSIEVNG 597
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 196/460 (42%), Gaps = 91/460 (19%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C+++ + QIHA GL LT I+ T P+ + YA
Sbjct: 21 DLLQSCESMAHLTQIHAKIFRVGLQ--DNMDTLTKIVLFCT---------DPSRGSIRYA 69
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+ + P YN +I+A + +VLFS++R + PD ++ P + +A L
Sbjct: 70 ERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCL 129
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ +H V+K GF D V NS+M +Y ++ A+++FDEI RDVVS N LI
Sbjct: 130 GKVVEGEKVHGYVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLI 187
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
YV A +F RM + ++K D
Sbjct: 188 SSYVGHRKFEDAIAVFRRM------------------------------RRESNLKADEA 217
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VS LSAC+ L E G+ IHRY++ ++ + + + L+D Y KCG ++ A IF+
Sbjct: 218 TVVSTLSACSVLRNQEVGEEIHRYVDA-ELEMTTKIGNALLDMYCKCGCVDKARAIFDEM 276
Query: 305 QEKNLFTWNAMLVGLAMHG-------------------------------LGRLSLVYFS 333
KN+ W +M+ G A +G L +L F
Sbjct: 277 GNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFR 336
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCM 386
+M R++PD ++ L GC+ G +++ + L ++ V G + +
Sbjct: 337 KMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTA--------L 388
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
D+ + G +E+ALE+ +M D W+ ++ G ++G
Sbjct: 389 VDVYAKCGCVEKALEVFYEMK-ERDTASWTSVIYGLAVNG 427
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 234/393 (59%)
Query: 98 LFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC 157
L +MR + P+ +F +L+ACS + + IH+++ K+GF D + ++ ++Y
Sbjct: 373 LLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYA 432
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
+ +A+++F ++ ++VV+ +L+ Y+K GDL A ++F M R+ VSW ++AG
Sbjct: 433 KCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAG 492
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
YAQS + +L +M +PD + ++S L AC L LE+GK +H + D
Sbjct: 493 YAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESD 552
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
+ ++T L+ Y+KCG + A +F+ ++ WNAML G HG+G ++ F RM++
Sbjct: 553 TVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLK 612
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
R+ P+ +T + C AGLV E R++F M+ + + +HYGCM DLLGRAG ++
Sbjct: 613 ERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQ 672
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
EA E I++MP D+ VW LLG C+ H NV++AE AA H+++L+P + VY L+++YA
Sbjct: 673 EAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYA 732
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
A RW+D K+R+ +D +KK+ G S I+++G
Sbjct: 733 QAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDG 765
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 135/254 (53%), Gaps = 3/254 (1%)
Query: 169 FDEI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
DE+ L D+ N+LI+ Y K GD+A Q+F RM RD V+W +++A YA ++ +A
Sbjct: 104 LDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKA 163
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
F M D +I+P+ I +S L AC LE+ + IH ++ + + D ++T L+
Sbjct: 164 FDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITM 223
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y+KCG I+ A EIF+ +E+N+ +W A++ A H + + +M++A I P+ VT
Sbjct: 224 YSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTF 283
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
+ L C+ ++ R++ + S G+ ++ + + + I++A E +M
Sbjct: 284 VSLLNSCNTPEALNRGRRIHSHI-SERGLETDVVVANALITMYCKCNCIQDARETFDRMS 342
Query: 408 MGGDVFVWSGLLGG 421
DV WS ++ G
Sbjct: 343 K-RDVISWSAMIAG 355
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 162/358 (45%), Gaps = 38/358 (10%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F + +++++I A+ + P A F +M+ +I P+ +F +L+AC+
Sbjct: 135 VFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSM 194
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
A+ IH+ V G DV V +L+ +Y
Sbjct: 195 LEKAREIHTVVKASGMETDVAVATALITMYS----------------------------- 225
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
K G+++ A ++F +M R+ VSW ++ AQ + EA +L+ M+ I P+ +
Sbjct: 226 --KCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTF 283
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS L++C L +G+ IH +I + D ++ L+ Y KC I A E F+ +
Sbjct: 284 VSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSK 343
Query: 307 KNLFTWNAMLVGLAMHGLG---RLSLVY--FSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+++ +W+AM+ G A G L V+ RM + P+ VT + L CS G ++
Sbjct: 344 RDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALE 403
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+ R++ E+ V G + + ++ + G I EA ++ KM +V W+ LL
Sbjct: 404 QGRQIHAEISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLL 459
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 133/315 (42%), Gaps = 39/315 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ + + S+N +I + L S M+ PD + +L A
Sbjct: 468 LTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEA 527
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L + + +H++ +KLG D V SL+ +Y + +A+ +FD+I RD V+
Sbjct: 528 CGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAW 587
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ GY Q EA+ LF M+ +
Sbjct: 588 NAMLAGY-------------------------------GQHGIGPEAVDLFKRMLKERVP 616
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAIE 299
P+ I + +SAC R G +++G+ I R ++ + +++ +VD + G + A E
Sbjct: 617 PNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEE 676
Query: 300 IFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC-SHA 357
+ E ++ W+A+L H + L ++ R++P ++ L + A
Sbjct: 677 FIQRMPCEPDISVWHALLGACKSH--DNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQA 734
Query: 358 GLVDEA---RKLFDE 369
G D++ RK+ D+
Sbjct: 735 GRWDDSTKVRKVMDD 749
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 104/200 (52%), Gaps = 2/200 (1%)
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
++ + +EAIQL + + ++ + CA+L E GK +H+ ++ + +D +
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
L L++FY+K G + + ++F +++ TW++M+ A + + F RM +A
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
I+P+ +T L L C++ ++++AR++ +++ G+ ++ + + + G I A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKA-SGMETDVAVATALITMYSKCGEISLA 233
Query: 400 LEMIKKMPMGGDVFVWSGLL 419
E+ +KM +V W+ ++
Sbjct: 234 CEIFQKMKE-RNVVSWTAII 252
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 254/428 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ + S+N+II + F+ + LF +M+ +++ D + + A
Sbjct: 164 LAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISA 223
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
L + + + + G + D+++ N+L+ +Y + A +F ++ +++VS
Sbjct: 224 TCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSW 283
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GY K G+L A++LF+ MP RD +SW +++ GY+ + Q EA++LF MM +K
Sbjct: 284 NAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVK 343
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I + +ALSACA LG L+ G+ +H YI + I+ D F+ L+D Y KCG + A+++
Sbjct: 344 PDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQV 403
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + ++ +W +++ GLA++G +L F +M++ I P T +G L+ C+H GLV
Sbjct: 404 FNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLV 463
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F ME+ Y ++ E+KHYGC+ DLL R+G ++ A IKKMP+ DV +W LL
Sbjct: 464 DKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLS 523
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C++HGN+ +AE ++ ++ L P + G Y + + YA +DRW+DV+KIR+ ++ ++K
Sbjct: 524 ACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKP 583
Query: 481 AGCSLIQL 488
S I++
Sbjct: 584 CAYSSIEV 591
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 218/479 (45%), Gaps = 78/479 (16%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I ++ I ++HA L + + + P I I + A SP + P ++
Sbjct: 21 ISNSTSLNSIKELHAQ-LVRAQMHIDPSSISEVIKHY---------ALSPQSLPKAHF-- 68
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN I P+ +N +I + P +A+ ++ M I +F FL ++C+++
Sbjct: 69 VFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSD 128
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
Q + +KLGF +FV N+L+H+Y F
Sbjct: 129 VRQGQMVRVHSMKLGFESYLFVSNALIHMYVCF--------------------------- 161
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
G+LA A+++FD M RD VSW +++ GY Q ++ ++ + LF M ++++ D++ +
Sbjct: 162 ----GELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTM 217
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ A+SA L E E G + +YI+ + + VD +L L+D Y + G I+ A +F +E
Sbjct: 218 MKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKE 277
Query: 307 KNLFTWNAMLVGLAMHG-----------------LGRLSLV--------------YFSRM 335
KN+ +WNAM++G A G + S++ F M
Sbjct: 278 KNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEM 337
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
+ + +KPD +T+ AL C+H G +D + D + + + ++ + D+ + G+
Sbjct: 338 MVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDIKSDVFVGNSLIDMYCKCGV 396
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPEDGGVYKVL 452
+E+AL++ M D W+ ++ G ++G E A + ++K + P G VL
Sbjct: 397 VEKALQVFNDMKT-RDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVL 454
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 264/490 (53%), Gaps = 62/490 (12%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSA-----SSPTTDPLSY 63
+C+ I QI Q+HA T G++ + +LY K + +A DP+S+
Sbjct: 12 KCRNIFQIKQVHAQVTTTGII--HDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSW 69
Query: 64 ALSI---FNNIPYPSTF-SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
++ I N Y F ++ +IRA + PD +S PF+++
Sbjct: 70 SVMIGGFVKNGDYERCFQTFRELIRAGS--------------------KPDNFSLPFVIK 109
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC + + IHS VLK G D FV
Sbjct: 110 ACRDTMGLIMGRLIHSTVLKNGLHLDNFV------------------------------- 138
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
C+TL+D Y K G + +A+QLFDRMP +D V+ ++AGYA+ + E+ LF M
Sbjct: 139 CSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGF 198
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD +A+V+ ++ACA+LG + + + +H Y+ + +D L T ++D YAKCG I+++ E
Sbjct: 199 VPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSRE 258
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF+ ++KN+ +W+AM+ HG GR +L F M+ + I P+ +T + L CSHAGL
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ +LF M YGV ++KHY CM DLLGRAG +++AL +I+ M + D +W L
Sbjct: 319 VDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFL 378
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CRIH V++AE AA+ ++ L+ ++ G Y +L+++YANA RW+DV KIR + ++KK
Sbjct: 379 GACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKK 438
Query: 480 NAGCSLIQLN 489
G + I+++
Sbjct: 439 IPGYTWIEVD 448
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 271/487 (55%), Gaps = 43/487 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I++C++++ + QIHA LT + P ++ L I F A SP D + YA
Sbjct: 63 LIRKCRSMRVLRQIHARLLTHAM----PISSISFGLCKIIGF----CALSPYGD-IDYAR 113
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSP-LNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQ 123
+F+ I P+ FS+N++IR + +P V+LF +M P P+ ++ F+L+ACS
Sbjct: 114 KLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSI 173
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + Q +H+ VLK GF FV +L
Sbjct: 174 VSALEEGQQVHANVLKSGFGSSPFVETAL------------------------------- 202
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
++ Y K D+ A ++FD + R+ V+W T+++GYA+ EA+ LF +M + PD
Sbjct: 203 VNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDE 262
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +VS +SACA G L+ GK +H YI I D LST LV+ YAKCG I A E+F++
Sbjct: 263 VTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDA 322
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K+ W++M+VGLA++GL +L F RM EA++KP+ VT +G L C+H+GLV E
Sbjct: 323 MPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEG 382
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+ + M +G+ ++ YGCM DLL RA L+E+A +++ MP+ + +W LL GC+
Sbjct: 383 RRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCK 441
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
N++ +E A+ +++L+P + Y +L+++YA+ +WE + ++R+ + IK GC
Sbjct: 442 KSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGC 501
Query: 484 SLIQLNG 490
S I+++G
Sbjct: 502 SSIEVDG 508
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 261/490 (53%), Gaps = 32/490 (6%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
+ +HAH + G L SP H+ + AS +++ LSYA + P
Sbjct: 21 HLRALHAHLVVSGRL-ASPSHLAAFL------------ASLASSNHLSYARLVLPQRP-A 66
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA-------------- 120
+ ++N IRA P A F+ R + +PPD YS FL+RA
Sbjct: 67 TLLAHNAFIRALARGPRPCLA---FAAFRDLPLPPDHYSLNFLVRAATALVASAAEEKHV 123
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+++ + A + H ++ G D V + ++ +Y + ++ F EI DVV
Sbjct: 124 SAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCV 183
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++ GD+ AR LFD MP RD V+W ++AGY + EA+ LF M+
Sbjct: 184 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTT 243
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
LVS L+ACA++G L++GK +H Y+ +++ L T LVD Y+KCG + TA+E+
Sbjct: 244 VGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEV 303
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FES E+N++TW + + GLAM+G+G L F RM A I+P+GV+ + L GCS AGLV
Sbjct: 304 FESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLV 363
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE R FD M+ YGV +HYGCM DL GRAG +++A+ I MPM VW LL
Sbjct: 364 DEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLN 422
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
RIH +V++ + A + ++ ++ E+ + L+++YA + W+ V ++R + A +KK
Sbjct: 423 ASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKV 482
Query: 481 AGCSLIQLNG 490
G S I+++G
Sbjct: 483 PGWSTIEVDG 492
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 262/490 (53%), Gaps = 46/490 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +K C +IK ++QIH+ GL T ++ + F S+ SP+ D LSYA
Sbjct: 669 SLLKLCSSIKHLYQIHSQIQVSGL------QGDTFLVTQLIKF----SSLSPSKD-LSYA 717
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SI ++ +P +N +IR + ++P +A+ ++ MR I P+ +FPFLL+AC+
Sbjct: 718 QSILDHSVHPVPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAAC 777
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H +V+K G CDV+V N+L++ Y SC ++
Sbjct: 778 FATKEGKQVHVEVIKYGLDCDVYVNNNLVNFYG---------------------SCKKIL 816
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
D A ++FD MP R VSW ++ +S + EAI+ F M D +PD
Sbjct: 817 D----------ACKVFDEMPERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGT 866
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V L CA +G L G+ IH + + ++ L T LVD YAK G + A +F+
Sbjct: 867 TMVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRM 926
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGLVDEA 363
+EKN++TW+AM++GLA HG + L F M+ + I P+ VT LG L CSHAGLV +
Sbjct: 927 KEKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIHPNYVTFLGVLCACSHAGLVSDG 986
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F EM YG+ + HYG M D+LGRAGL++EA I KMP D VW LL C
Sbjct: 987 FRYFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACS 1046
Query: 424 IH---GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
IH + +A + +++L+P G + ++A++YA+A WE K+RR + G +KK
Sbjct: 1047 IHDVKDSTGVAYKVRKRLLELEPRRSGNFVMVANMYADAGMWEKAAKVRRVMRDGGLKKK 1106
Query: 481 AGCSLIQLNG 490
AG S ++L+G
Sbjct: 1107 AGESCVELSG 1116
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 149/306 (48%), Gaps = 13/306 (4%)
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S+ S AQ + L L +C +S+ H+Y + +++ + D L ++ +
Sbjct: 652 SEFTDISGAQVERTPCLSLLKLC-----SSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFS 706
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+L + DL++A+ + D + W L+ GYA S+ ++A+ ++ NM + I+P
Sbjct: 707 SL----SPSKDLSYAQSILDHSVHPVPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRP 762
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+++ L ACA ++GK +H + + D +++ LV+FY C I A ++F
Sbjct: 763 NSLTFPFLLKACAACFATKEGKQVHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVF 822
Query: 302 ESSQEKNLFTWNAMLVG-LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
+ E+ + +WNA++ + LG ++ YF +M + +PDG T++ LV C+ G +
Sbjct: 823 DEMPERTVVSWNAVITSCVESLKLGE-AIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNL 881
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
R + ++ G+ + + D+ ++G + A + +M +V+ WS ++
Sbjct: 882 GLGRWIHSQVIE-RGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKE-KNVWTWSAMIL 939
Query: 421 GCRIHG 426
G HG
Sbjct: 940 GLAQHG 945
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 258/483 (53%), Gaps = 42/483 (8%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
IKRC + + I AH + L T L T K I S++ + ++YA
Sbjct: 14 IKRCTRVGDLKAIQAHMVRANL-------TQDTFL----TSKLIESSAVTLSGHVAYAHR 62
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF+ +P+ F +NTIIR +++ SP+ A+ L+ M I P+ Y+F F+L+AC +L
Sbjct: 63 IFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLR 122
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
Q +HSQ++K+G + ++N L+ +Y
Sbjct: 123 LCEGQELHSQIVKVGLDFETPLVNGLIKLYAA---------------------------- 154
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
G + +A +FD MP D+ SW T+V+GYAQ+ Q EA++LF M ++ D L
Sbjct: 155 ---CGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTL 211
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S + C LG L+ GK +H Y++ +++D L T LV Y+KCG ++ A+++F+ E
Sbjct: 212 ASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAE 271
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+++ W+ M+ G A+HG G +L F M ++ P+ VT L CSH+GLV++ ++
Sbjct: 272 RDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQI 331
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F+ M + Y ++ ++KHYGCM DL RAG++ A + I+ MP+ +V +W LLG C+ HG
Sbjct: 332 FETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHG 391
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
++ E + ++KL P Y ++++VYA+ RW V ++R + KK G S I
Sbjct: 392 YKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSI 451
Query: 487 QLN 489
++N
Sbjct: 452 EIN 454
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 9/187 (4%)
Query: 239 IKP--DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--GYI 294
+KP D +LV+A+ C R+G+L K I ++ + D+FL++ L++ A G++
Sbjct: 1 MKPMLDQGSLVAAIKRCTRVGDL---KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHV 57
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A IF + NLF WN ++ G ++ ++ + M I P+ T L C
Sbjct: 58 AYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKAC 117
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ E ++L ++ V G+ E + L G ++ A M +MP D
Sbjct: 118 CKLLRLCEGQELHSQIVKV-GLDFETPLVNGLIKLYAACGCMDYACVMFDEMP-EPDSAS 175
Query: 415 WSGLLGG 421
WS ++ G
Sbjct: 176 WSTMVSG 182
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 262/479 (54%), Gaps = 14/479 (2%)
Query: 13 IKQIHQIHAHFLTKGLL-FLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
+ ++ Q+HA F+ GLL S C +L + T IS YA SIF I
Sbjct: 1 MHEVRQLHAQFVVSGLLNHHSLCG--RRLLESYVTMSEIS-----------YARSIFERI 47
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
PY F YNT+IR L P ++++LF+++ + PD Y++ F+L+ACS + +
Sbjct: 48 PYLDVFVYNTMIRGLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGK 107
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+H Q++K G + + +SL+H+Y + +A+ + E + ++ N++I GY+ G
Sbjct: 108 QVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKG 167
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
+ AR +FD+M +D SW ++ G ++ EA+ LF +MM P+ ALVS LS
Sbjct: 168 HVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLS 227
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
ACA LG L QG+ IH YI+ + LST L+D YAKCG I + + F +++ T
Sbjct: 228 ACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVT 287
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W A++ G A++G + F M+ I P+GV + L CSHAG V+E + F++M
Sbjct: 288 WGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMM 347
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G+ ++HYGCM DLLGRAG ++EA E I MP + +W +L CR H ++
Sbjct: 348 VDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNRG 407
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
A H+++L+P G YK+ ++ NA ++ KIR+ ++ ++ +G S I+++G
Sbjct: 408 SWAFRHLIELEPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEVDG 466
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 254/428 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ + S+N+II + F+ + LF +M+ +++ D + + A
Sbjct: 123 LAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISA 182
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
L + + + + G + D+++ N+L+ +Y + A +F ++ +++VS
Sbjct: 183 TCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSW 242
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GY K G+L A++LF+ MP RD +SW +++ GY+ + Q EA++LF MM +K
Sbjct: 243 NAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVK 302
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I + +ALSACA LG L+ G+ +H YI + I+ D F+ L+D Y KCG + A+++
Sbjct: 303 PDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQV 362
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + ++ +W +++ GLA++G +L F +M++ I P T +G L+ C+H GLV
Sbjct: 363 FNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLV 422
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F ME+ Y ++ E+KHYGC+ DLL R+G ++ A IKKMP+ DV +W LL
Sbjct: 423 DKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLS 482
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C++HGN+ +AE ++ ++ L P + G Y + + YA +DRW+DV+KIR+ ++ ++K
Sbjct: 483 ACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKP 542
Query: 481 AGCSLIQL 488
S I++
Sbjct: 543 CAYSSIEV 550
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 196/419 (46%), Gaps = 66/419 (15%)
Query: 53 ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFY 112
A SP + P ++ +FN I P+ +N +I + P +A+ ++ M I
Sbjct: 16 ALSPQSLPKAHF--VFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHL 73
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
+F FL ++C+++ Q + +KLGF FV N+L+H+Y F
Sbjct: 74 TFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCF------------- 120
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
G+LA A+++FD M RD VSW +++ GY Q ++ ++ + LF
Sbjct: 121 ------------------GELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFR 162
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M ++++ D++ ++ A+SA L E E G + +YI+ + + VD +L L+D Y + G
Sbjct: 163 EMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRG 222
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHG-----------------LGRLSLV----- 330
I+ A +F +EKN+ +WNAM++G A G + S++
Sbjct: 223 MIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSL 282
Query: 331 ---------YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
F M+ + +KPD +T+ AL C+H G +D + D + + + ++
Sbjct: 283 AKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDIKSDVF 341
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK 440
+ D+ + G++E+AL++ M D W+ ++ G ++G E A + ++K
Sbjct: 342 VGNSLIDMYCKCGVVEKALQVFNDMKT-RDSVSWTSIISGLAVNGFAESALNVFDQMLK 399
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 256/486 (52%), Gaps = 43/486 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +KRCK++++ ++HAH L GL + S C ++S + + YA
Sbjct: 36 SLLKRCKSMEEFKKVHAHILKLGLFYDSFC-----------GSNLVASCALSRWGSMEYA 84
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SIF I P +F YNT+IR + A++L+ +M I PD +++PF+L+ACS L
Sbjct: 85 CSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLL 144
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ IH+ V G DVFV N L I
Sbjct: 145 VALKEGVQIHAHVFNAGLEVDVFVQNGL-------------------------------I 173
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDN 243
Y K G + HA +F++M + SW +++ +A + E + L +M + + +
Sbjct: 174 SMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEE 233
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVSALSAC LG G+ IH + N ++ + T L+D Y KCG + + +F++
Sbjct: 234 SILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQN 293
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
KN +++ M+ GLA+HG GR +L FS M+E + PD V +G L CSHAGLV E
Sbjct: 294 MAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEG 353
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F+ M+ + + ++HYGCM DL+GRAG+++EA ++IK MP+ + VW LL C+
Sbjct: 354 FQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACK 413
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H N+EI E AA+++ KL + G Y VLA++YA A +W +V +IR + + + G
Sbjct: 414 VHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLVQTPGF 473
Query: 484 SLIQLN 489
SL++ N
Sbjct: 474 SLVEAN 479
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 7/183 (3%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA--KCGYINTAIEIFESSQEK 307
LS R +E+ K +H +I + DSF + LV A + G + A IF +E
Sbjct: 35 LSLLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEEP 94
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
F +N M+ G +L+ + M+E I+PD T L CS + E ++
Sbjct: 95 GSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIH 154
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ + G+ ++ + + G+ G IE A + ++M V WS ++G H +
Sbjct: 155 AHVFNA-GLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMD-EKSVASWSSIIGA---HAS 209
Query: 428 VEI 430
VE+
Sbjct: 210 VEM 212
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 244/436 (55%), Gaps = 8/436 (1%)
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC- 121
+A +F+ +P S + + RAH + A+ LF M PD + +L AC
Sbjct: 64 HARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFMPDNVALAVVLAACH 123
Query: 122 ---SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
S S + +H+ ++ G DVFV L+ VY + A+ +FD + + +
Sbjct: 124 GAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTI 183
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD-- 236
+ NT++ YV+ D+ A +LF MP RD VSW T++AGY +C+EA+ LF M+
Sbjct: 184 AWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPS 243
Query: 237 -LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ P+ + + LSACA G LE G +H YI+ NQ+ + L L+D YAKCG I+
Sbjct: 244 SCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSID 303
Query: 296 TAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A+++FE + +++L++W ++ GLAMHG L FS M ++ + PD VT +G L C
Sbjct: 304 KALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNAC 363
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+H GLVDE F M+ Y ++ +++HYGCM DLLGR G + EA MI+ MPM ++ +
Sbjct: 364 AHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVI 423
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W L C++H +VE+ E AA V +L P+D +++ +YA A W + + RR +++
Sbjct: 424 WGAFLSACKVHSSVELGEIAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARERREMNS 483
Query: 475 GKIKKNAGCSLIQLNG 490
++KK GCS + L+G
Sbjct: 484 LQMKKTPGCSSVALDG 499
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 47/289 (16%)
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+ Y G HAR LFD MP + V+ + +A S Q +A+ LF +M+
Sbjct: 50 TALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFM 109
Query: 241 PDNIALVSALSACARLGEL----EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
PDN+AL L+AC G G+ +H +I I D F+ST L+ Y + G +
Sbjct: 110 PDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTV 169
Query: 297 AIEIFESSQEKNLFTWNAM-------------------------------LVGLAMHGLG 325
A +F+S K+ WN M + G + G
Sbjct: 170 ARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRC 229
Query: 326 RLSLVYFSRMIEAR---IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
+ +L F +M+ + P+G T+ L C+ AG ++ + +Y ++
Sbjct: 230 KEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVH-----LYIDKNQMND 284
Query: 383 YG----CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
G C+ D+ + G I++AL++ +K P D++ W+ ++ G +HG
Sbjct: 285 NGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGR 333
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 259/475 (54%), Gaps = 43/475 (9%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
++ QIHA + G+ +P +++A+ + + P+S+A IFN I P
Sbjct: 50 KLKQIHAFSIRHGVPPQNP-DFNKHLIFALVSL----------SAPMSFAAQIFNQIQAP 98
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLCSHSLAQTI 133
+ F++NT+IR +P AV LFSQM S I PD ++FPFL +A ++L SL + I
Sbjct: 99 NIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGI 158
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
HS V++ GF FV NSL+H+Y V G L
Sbjct: 159 HSVVVRNGFDSLRFVQNSLVHMYSVL-------------------------------GSL 187
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A Q+F+ M +RD V+W +++ G+A + EA+ L+ M ++PD +VS LSAC
Sbjct: 188 XSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSAC 247
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
LG L G+ +H Y+ + + S L+D Y+KCG A ++F+ +E+++ +W
Sbjct: 248 VELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWT 307
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+++VGLA++GLG +L F + +KP +T +G L CSH G++DE F M+
Sbjct: 308 SLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEE 367
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ ++H+GCM DLL RAG + +A + I+ MP+ + +W LLG C IHG++E+ E
Sbjct: 368 YGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEV 427
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
A + +L+ G + +L+++YA+ RW DV +R+ + +KK G SL++L
Sbjct: 428 ARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVEL 482
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 254/436 (58%), Gaps = 10/436 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA +F+ + S++T+IR+ + A+ L +M + + P + ++
Sbjct: 175 VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL 234
Query: 121 CSQLCSHSLAQTIHSQVLK------LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
+ + + + +H+ V++ +G V +L+ +Y L A++LF+ +
Sbjct: 235 FADTANMRMGKAMHAYVIRNSNNEHMG----VPTTTALLDMYAKCGHLGLARQLFNGLTQ 290
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
+ VVS +I G +++ L AR LFD RD + W +++ YAQ++ ++A LF M
Sbjct: 291 KTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM 350
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
++P + +VS LS CA G L+ GK +H YI+ ++ VD L+T LVD YAKCG I
Sbjct: 351 RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDI 410
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
N A +F + +++ WNA++ G AMHG G +L F+ M +KP+ +T +G L C
Sbjct: 411 NAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHAC 470
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
SHAGLV E +KLF++M +G+ +++HYGCM DLLGRAGL++EA EMIK MP+ + V
Sbjct: 471 SHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV 530
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W L+ CR+H N ++ E AA +++++PE+ G +++++YA A+RW D +R+++
Sbjct: 531 WGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKT 590
Query: 475 GKIKKNAGCSLIQLNG 490
+KK G S+I++NG
Sbjct: 591 VGMKKEPGHSVIEVNG 606
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 176/401 (43%), Gaps = 80/401 (19%)
Query: 73 YPSTFS----YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+PS S +N +I ++T + P NA+ +++Q+R + D + P +L+AC Q+
Sbjct: 82 FPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQ 141
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
L + IH VLK G DVFV N+LM +Y + A+ +FD+++ RDVVS
Sbjct: 142 LGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVS--------- 192
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
W T++ +++ + + A++L M + ++P +A+VS
Sbjct: 193 ----------------------WSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVS 230
Query: 249 ALSACARLGELEQGKNIHRYI--ELNQIRVDSFLSTGLVDFYAKCGYINTAIE------- 299
++ A + GK +H Y+ N + +T L+D YAKCG++ A +
Sbjct: 231 MVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQ 290
Query: 300 ------------------------IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+F+S+Q +++ W AML A + F +M
Sbjct: 291 KTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM 350
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC-----MADLL 390
+ ++P VTI+ L C+ AG +D + + + KE C + D+
Sbjct: 351 RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY------IDKERVEVDCILNTALVDMY 404
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G I A + + + D+ +W+ ++ G +HG E A
Sbjct: 405 AKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHGYGEEA 444
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/489 (33%), Positives = 263/489 (53%), Gaps = 45/489 (9%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+++ I++C T+ I Q+ AH LT G L T +L A SP+ L
Sbjct: 4 MDSIIQKCTTLSHIKQVQAHLLTTGQFNLRISPSRTRLLE--------HCALSPSPAYLP 55
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA I +IP+PST +N ++R P +A+ S + + PD +F F L A +
Sbjct: 56 YAAHIHRHIPHPSTNDFNALLRGLARGPHPTHALTFLSTI----LHPDALTFSFSLIASA 111
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + S IHS +L+ G + D++ T
Sbjct: 112 RALALSETSQIHSHLLRRG-------------------------------CHADILLGTT 140
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LID Y K GDL A+++FD +P RD +W L+AG AQ + EA+ LF M K +
Sbjct: 141 LIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEKIN 200
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
I+++ AL+AC++LG L G+ +H + + ++ + ++D YAKCG+ + +F
Sbjct: 201 EISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFS 260
Query: 303 S-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ + K++ TWN M++ AMHG G +L F M + +++ D VT L L C+HAGLV+
Sbjct: 261 TMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAGLVE 320
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E +LFDEM GV++ +KHYG + DLLGRAG + EA +I MP+ DV +W LLG
Sbjct: 321 EGVRLFDEMVG-RGVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLLGA 379
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C+ +GNVE+AE A+ ++++ G + +L++VYA +RWEDV ++R ++ + ++K
Sbjct: 380 CKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVP 439
Query: 482 GCSLIQLNG 490
G S I++ G
Sbjct: 440 GFSYIEVEG 448
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/443 (36%), Positives = 238/443 (53%), Gaps = 64/443 (14%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D +++ FL++A S + + +HS V+KLG + D FV N+L+ Y DA+++F
Sbjct: 5 DSFTYSFLIKALSA-AGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVF 63
Query: 170 DEILYRDVVSCNT-------------------------------LIDGYVKAGDLAHARQ 198
DE+ RDVVS NT ++DGY KAG++ A +
Sbjct: 64 DEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFE 123
Query: 199 LFDRMPFRDAVSWGTLVAGY-------------------------------AQSDQCEEA 227
LF RMP R+ VSW T+V+GY AQ +EA
Sbjct: 124 LFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEA 183
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+LF M + ++ D A+VS L+ACA G L GK IHRY+ + + + L+D
Sbjct: 184 GKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDM 243
Query: 288 YAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
+ KCG +N A +F++ +K+ +WN+++ G AMHG G +L F++M + PD VT
Sbjct: 244 FCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVT 303
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
++ L C+H G VDE R+ F ME YG+ +++HYGCM DLLGR GLI+EA+++IK M
Sbjct: 304 MINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSM 363
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
P + +W LL CR+H NVE AE A + KL+P + G Y VL+++YA A +W D+
Sbjct: 364 PWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMA 423
Query: 467 KIRRSLDAGKIKKNAGCSLIQLN 489
K R + +K AG S ++LN
Sbjct: 424 KARMQMKGTGSQKTAGSSWVELN 446
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A IF+ +P + ++ ++ A A LF+QM+ S+ D + +L A
Sbjct: 149 LEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAA 208
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD-EILYRDVVS 179
C++ S SL + IH V K V N+L+ ++C + A +FD E + +D VS
Sbjct: 209 CAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVS 268
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N++I G+A ++A++LF M
Sbjct: 269 WNSII-------------------------------GGFAMHGHGDKALELFAQMKQQGF 297
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAI 298
PD + +++ LSAC +G +++G+ +E + + G ++D + G I A+
Sbjct: 298 NPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAV 357
Query: 299 EIFES-SQEKNLFTWNAMLVGLAMH 322
++ +S E N W ++L +H
Sbjct: 358 DLIKSMPWEPNEVIWGSLLSACRLH 382
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 243/424 (57%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + + ++N +I ++ + + + L+ +M+T PD +L AC+ +
Sbjct: 173 LFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGN 232
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S + IH + GF + SL+++Y + A+E++D++ + +V ++ G
Sbjct: 233 LSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSG 292
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G + AR +FDRM +D V W +++GYA+S Q EA+QLF M I PD I +
Sbjct: 293 YAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITM 352
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S +SACA +G L Q K IH Y + N ++ L+D YAKCG + A E+FE+
Sbjct: 353 LSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPR 412
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
KN+ +W++M+ AMHG ++ F RM E I+P+GVT +G L CSHAGLV+E +K
Sbjct: 413 KNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKF 472
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M + + +S + +HYGCM DL RA + +A+E+I+ MP +V +W L+ C+ HG
Sbjct: 473 FSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHG 532
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+E+ E AA +++L+P+ G VL+++YA RW+DV +R+ + + K CS I
Sbjct: 533 EIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRI 592
Query: 487 QLNG 490
++N
Sbjct: 593 EVNN 596
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 217/471 (46%), Gaps = 73/471 (15%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CKT++ + QIHA L + ++L L P SP+ L YALS+F+
Sbjct: 22 CKTLRHVKQIHAQILRSKM---DNSNLLLLKLVLCCCTLP-----SPSPSALDYALSLFS 73
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+IP P T N ++R + +P N + L+ +R P D +SFP LL+A S+L + +L
Sbjct: 74 HIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNL 133
Query: 130 AQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
IH K GF D F+ ++L+ +Y +C ++D
Sbjct: 134 GLEIHGLASKFGFFHADPFIQSALIAMY---------------------AACGRIMD--- 169
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
AR LFD+M RD V+W ++ GY+Q+ + ++L+ M +PD I L +
Sbjct: 170 -------ARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCT 222
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LSACA G L GK IH++I+ N RV S + T LV+ YA CG ++ A E+++ K+
Sbjct: 223 VLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKH 282
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEA------------------------------ 338
+ AML G A G+ + + F RM+E
Sbjct: 283 MVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQR 342
Query: 339 -RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
RI PD +T+L + C++ G + +A+ + + G + L + D+ + G +
Sbjct: 343 RRIVPDQITMLSVISACANVGALVQAKWIHTYADK-NGFGRTLPINNALIDMYAKCGNLV 401
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
+A E+ + MP +V WS ++ +HG+ + A A + + E GV
Sbjct: 402 KAREVFENMPR-KNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGV 451
>gi|357140545|ref|XP_003571826.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Brachypodium distachyon]
Length = 489
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/390 (39%), Positives = 235/390 (60%), Gaps = 10/390 (2%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQE 167
P +FPFL RA ++L S LA ++HS L+LG + CD+ + NS +H+Y A+
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHSHPLRLGLLPCDLHIANSFVHMYAACALPDLARR 117
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
LFDEI + VS N L+DGY K DL+ AR++FDRMP RD VSW ++ G + + EA
Sbjct: 118 LFDEIPRPNPVSWNALLDGYAKCRDLSAAREVFDRMPHRDVVSWSAMIDGCVKCGEYREA 177
Query: 228 IQLFCNMMDL-----DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
+ LF MM+ ++ +++ ++S L ACA LG+L +G+ +HRY++ ++ L+T
Sbjct: 178 LALF-EMMEAAATGHGVRANDVTMISMLGACAHLGDLRRGRQMHRYLQERGFLLNLRLAT 236
Query: 283 GLVDFYAKCGYINTAIEIFESSQ--EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
LVD YAKCG I+ A+E+F + ++ WNAM+ GLA+HG+G ++ F M + +
Sbjct: 237 SLVDMYAKCGAISEALEVFRAVPVASTDVLMWNAMIGGLAVHGMGMETVELFQEMQHSGV 296
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
PD +T LG L C H GLVDEA + F +E+ G+ ++HY C+ D+L RAG +EEA
Sbjct: 297 VPDEITYLGLLSACVHGGLVDEAWRFFCSLEA-QGLRPHVEHYACLVDVLSRAGRLEEAY 355
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANAD 460
++K MPM V V +L C +HG VE+ E +++L+P+ G Y L+++YA A
Sbjct: 356 GVVKSMPMEPSVSVLGAILNACHLHGWVELGEVVGRQLVRLQPDHDGRYIGLSNIYAVAK 415
Query: 461 RWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
RW++ K R+ + +KK G S I + G
Sbjct: 416 RWQEAKKARKVMSERGLKKIPGFSEIDVGG 445
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 139/340 (40%), Gaps = 37/340 (10%)
Query: 19 IHAHFLTKGLLFLSPC--HILTTI--LYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
+H+H L GLL PC HI + +YA + A +F+ IP P
Sbjct: 82 LHSHPLRLGLL---PCDLHIANSFVHMYAACALPDL-------------ARRLFDEIPRP 125
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH----SLA 130
+ S+N ++ + A +F +M D S+ ++ C + + +L
Sbjct: 126 NPVSWNALLDGYAKCRDLSAAREVFDRMPHR----DVVSWSAMIDGCVKCGEYREALALF 181
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR----DVVSCNTLIDG 186
+ + + G + + S++ LR +++ + R ++ +L+D
Sbjct: 182 EMMEAAATGHGVRANDVTMISMLGACAHLGDLRRGRQMHRYLQERGFLLNLRLATSLVDM 241
Query: 187 YVKAGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y K G ++ A ++F +P D + W ++ G A E ++LF M + PD I
Sbjct: 242 YAKCGAISEALEVFRAVPVASTDVLMWNAMIGGLAVHGMGMETVELFQEMQHSGVVPDEI 301
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES- 303
+ LSAC G +++ +E +R LVD ++ G + A + +S
Sbjct: 302 TYLGLLSACVHGGLVDEAWRFFCSLEAQGLRPHVEHYACLVDVLSRAGRLEEAYGVVKSM 361
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
E ++ A+L +HG L V +++ R++PD
Sbjct: 362 PMEPSVSVLGAILNACHLHGWVELGEVVGRQLV--RLQPD 399
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 248/433 (57%), Gaps = 4/433 (0%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
+D L +++ P P+T Y + I AH+ L A+ L S+M + P ++
Sbjct: 80 SDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSS 139
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L AC L +L + +H+ KL D +V +L+ +Y A+ LFDE+ V
Sbjct: 140 LPACHGL---ALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHV 196
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V ++ Y K G L AR+LFD MP +D + W ++ GY Q + EA++LF M+
Sbjct: 197 VPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRS 256
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINT 296
+ PD +A++ ALSA A+LG E G+ +H Y++ ++ +++++ + T L+D Y KCG +
Sbjct: 257 GVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLED 316
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A+ +F S +K++ WNAM+ G AMHG R +L FS++ + P +T +G L CSH
Sbjct: 317 AVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSH 376
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLVDE + F ME Y + +++HYGCM DLLGRAGLIEEA +++ M + D +W
Sbjct: 377 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWV 436
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CR+H N+ + + A++++ + G+Y +L+++YA WE+V ++R + A
Sbjct: 437 SLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASG 496
Query: 477 IKKNAGCSLIQLN 489
I+K GCS I++
Sbjct: 497 IQKEPGCSAIEVG 509
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 248/433 (57%), Gaps = 4/433 (0%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
+D L +++ P P+T Y + I AH+ L A+ L S+M + P ++
Sbjct: 79 SDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSS 138
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L AC L +L + +H+ KL D +V +L+ +Y A+ LFDE+ V
Sbjct: 139 LPACHGL---ALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHV 195
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V ++ Y K G L AR+LFD MP +D + W ++ GY Q + EA++LF M+
Sbjct: 196 VPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRS 255
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINT 296
+ PD +A++ ALSA A+LG E G+ +H Y++ ++ +++++ + T L+D Y KCG +
Sbjct: 256 GVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLED 315
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A+ +F S +K++ WNAM+ G AMHG R +L FS++ + P +T +G L CSH
Sbjct: 316 AVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSH 375
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLVDE + F ME Y + +++HYGCM DLLGRAGLIEEA +++ M + D +W
Sbjct: 376 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWV 435
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CR+H N+ + + A++++ + G+Y +L+++YA WE+V ++R + A
Sbjct: 436 SLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASG 495
Query: 477 IKKNAGCSLIQLN 489
I+K GCS I++
Sbjct: 496 IQKEPGCSAIEVG 508
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 254/491 (51%), Gaps = 53/491 (10%)
Query: 10 CKTIKQIHQIHAHFLTKGLL--------FLSPCHILTTILYAIT-TFKPISSASSPTTDP 60
C T+ ++ QIHA L GL F S L +I YA + F P + S+PT
Sbjct: 28 CNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPT--- 84
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHT-LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
P F +NT+IRA++ S N+ + + M + P+ ++FPF+L+
Sbjct: 85 -----------PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLK 133
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C+ + S L + +H V+K GF DV VLN+L+H+YC
Sbjct: 134 GCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGE------------------ 175
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
DG+ A ++FD P D V+W ++AG+ + A+ LF M + +
Sbjct: 176 -----DGF------EFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGV 224
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD I +VS LSACA LG LE GK + Y+E I L L+D +AKCG ++ AI+
Sbjct: 225 CPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIK 284
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F + + +W +++ GLAMHG G ++ F M+E I PD V +G L CSH+GL
Sbjct: 285 LFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGL 344
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ R F ME + + +++HYGCM DLL R G ++EA E ++KMP + +W ++
Sbjct: 345 VDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTII 404
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C G +++ E+ ++ ++K +P Y +L+++YA +WE K+R +D +KK
Sbjct: 405 TACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKK 464
Query: 480 NAGCSLIQLNG 490
G ++I++N
Sbjct: 465 VPGSTMIEVNN 475
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 264/503 (52%), Gaps = 55/503 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSA-----SSPTTDPLSY 63
+ K K+ QIH H L G ++ T+++ + A SP D +SY
Sbjct: 103 KSKAFKEGQQIHGHVLKLGCDL--DLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSY 160
Query: 64 ---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
A +F+ IP S+N +I + + A+ LF M ++
Sbjct: 161 TALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 220
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD + ++ AC+Q S L + +HS + GF ++ ++N+L
Sbjct: 221 PDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNAL---------------- 264
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
ID Y K G+L A LF+ +P++D +SW TL+ GY + +EA+
Sbjct: 265 ---------------IDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEAL 309
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVD 286
LF M+ P+++ ++S L ACA LG ++ G+ IH YI+ L + S L T L+D
Sbjct: 310 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLID 369
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAKCG I A ++F S K+L +WNAM+ G AMHG S FSRM + I+PD +T
Sbjct: 370 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDIT 429
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L CSH+G++D R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI M
Sbjct: 430 FVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTM 489
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
M D +W LL C++HGNVE+ E+ A++++K++PE+ G Y +L+++YA A RW +V
Sbjct: 490 EMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVA 549
Query: 467 KIRRSLDAGKIKKNAGCSLIQLN 489
R L+ +KK GCS I+++
Sbjct: 550 NTRALLNDKGMKKVPGCSSIEID 572
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 234/420 (55%), Gaps = 12/420 (2%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
+ ++ + IHA + GL H L + F +S P D L YA+S+F
Sbjct: 1 QILQSLRMIHAQMIKTGL------HNTNYALSKLIEFCILS----PHFDGLPYAISVFET 50
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
I P+ +NT+ R H L S P++A+ L+ M ++ + P+ Y+FPFLL++C++ +
Sbjct: 51 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 110
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
Q IH VLKLG D++V SL+ +Y RL DA ++FDE +RDVVS LI GY
Sbjct: 111 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASR 170
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G + +A+++FD +P +D VSW +++GYA++ +EA++LF +MM +++PD +V+ +
Sbjct: 171 GYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 230
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
SACA+ G +E G+ +H +I+ + + + L+D Y+KCG + TA +FE K++
Sbjct: 231 SACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVI 290
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+WN ++ G L + +L+ F M+ + P+ VT+L L C+H G +D R + +
Sbjct: 291 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 350
Query: 371 ES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ + GV+ + D+ + G IE A ++ + + + W+ ++ G +HG +
Sbjct: 351 DKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRAD 409
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 279/557 (50%), Gaps = 90/557 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +K+C + K + QIH + ++ H +L+ K ++AS
Sbjct: 36 SLLKQCTSTKSLQQIHTQ------MIINAIHKPNFLLHRFIDLKDFNNASL--------- 80
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS-QMRTVSIPPDFYSFPFLLRACSQ 123
+F+ IPYP+ +++N +IR T N + F QM+ I P+ +++PF+ AC+
Sbjct: 81 --LFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACAN 138
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFV-------------------------------LNSL 152
L + Q HS VLK G D V NS+
Sbjct: 139 LLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSM 198
Query: 153 MHVYC----------VFHRLRDAQELFDEILYRDVV-SCNTL--------IDGYV----- 188
+ Y +F +RDA DE+ ++ +C L I+G+V
Sbjct: 199 ISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEM 258
Query: 189 ---------------KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
K GDL+ AR++FDRM +D V+W ++ GYAQ+ +EAI LF
Sbjct: 259 DLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSG 318
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M + + PD I LV LSACA +G L+ GK + Y ++ D ++ST L+D YAKCG
Sbjct: 319 MRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGS 378
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTILGAL 351
++ A+ +FE +KN +WNAM+ LA HG + SL F RM + ++P+ ++ +G L
Sbjct: 379 LDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVL 438
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
C HAGLVDE R+LFD M S +G+ +++H+ CM DLL RAG + EA + I+KMP D
Sbjct: 439 SACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPD 498
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
V LLG C+ NV+++E +++++P + G Y + + ++AN RW+D ++R
Sbjct: 499 EVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVL 558
Query: 472 LDAGKIKKNAGCSLIQL 488
+ + K GCS I++
Sbjct: 559 MRQRGVTKTPGCSWIEI 575
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 260/491 (52%), Gaps = 17/491 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL ++ I Q+ QIH C + T L++ + +
Sbjct: 68 TLLYLLQAVNFISQVKQIH-------------CQAIVTGLFSFGYLQNTLIKVYLENGLV 114
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A +F +P P S+N +I + L A+ LF +M + + PD ++ LL +C
Sbjct: 115 RLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSC 174
Query: 122 SQLCSHSLAQTIHS--QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
QL + + +H + K ++ + N+L+ +Y ++ A F + +D+VS
Sbjct: 175 GQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVS 234
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N ++ G K G+L AR F +MP RD VSW +LV GYA +L +M+ +
Sbjct: 235 WNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKV 294
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + ++S +SA G L+QG+ H ++ QI++D+FL + L+D Y KCG I A
Sbjct: 295 IPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASR 354
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ +K++ W M+ GLA HG G +L FS M E + PD VT + L CSH+GL
Sbjct: 355 VFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQE-DVSPDDVTFVSVLSACSHSGL 413
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ K+F M YG+ ++HYGC+ DLL R+G + EA ++I +MPM +W +L
Sbjct: 414 VDQGIKVFSSMTD-YGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAML 472
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C+ G+VE+AE A+ ++ L PE+ G Y +L+++YA + RW KIR ++++ +KK
Sbjct: 473 NACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKK 532
Query: 480 NAGCSLIQLNG 490
AGCS + ++G
Sbjct: 533 TAGCSSVVVDG 543
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 204/454 (44%), Gaps = 92/454 (20%)
Query: 44 ITTFKPISSASSPTTDPLSYALSIFNNI-PYPSTFSYNTIIRAHTLFSS--PLNAVVLFS 100
++ F S+ S P D L A+++FN+ P P+ F YNT+I A FSS + + L++
Sbjct: 1 MSRFIYFSAVSHP--DNLDLAITLFNHFTPNPNLFIYNTLISA---FSSLKKIESFYLYN 55
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
+ + PD + +LL+A + + S + IH Q + G ++ N+L+ VY
Sbjct: 56 VLLSSGECPDKQTLLYLLQAVNFI---SQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENG 112
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
+R A ++F+++ D+VS N +I GY K G +G
Sbjct: 113 LVRLAHQVFEKMPSPDIVSFNVMIVGYAKKG-------------------FGL------- 146
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS-- 278
EA++LF M+ L ++PD ++ L +C +LG ++ GK +H ++E + + S
Sbjct: 147 -----EAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNL 201
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR---- 334
L L+D Y KC + A+ F + +EK++ +WN ++ G A G + ++F +
Sbjct: 202 ILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCR 261
Query: 335 ---------------------------MIEARIKPDGVTILGALVGCSHAGLVDEAR--- 364
M+ ++ PD VT++ + + +G +D+ R
Sbjct: 262 DIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAH 321
Query: 365 ----KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++ ++++ G + D+ + G IE A + K++ DV VW+ ++
Sbjct: 322 GWVIRMQIKLDAFLG--------SALIDMYCKCGSIERASRVFKEINK-KDVTVWTTMIT 372
Query: 421 GCRIHGNVEIA-EAAAEHVMKLKPEDGGVYKVLA 453
G HG A E +E + P+D VL+
Sbjct: 373 GLAFHGYGSKALELFSEMQEDVSPDDVTFVSVLS 406
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 266/474 (56%), Gaps = 20/474 (4%)
Query: 33 PCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY---PSTFSYNTIIRAHTLF 89
P H T + F P +S P ++P N P+ S F+ N++ L+
Sbjct: 5 PSHTATPSQLQLPPFTP---SSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSV-DPIVLW 60
Query: 90 SSPL----------NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL--AQTIHSQV 137
+S L A F++MR + P+ +F LL AC+ S S A ++H
Sbjct: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
Query: 138 LKLGF-ICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
K G V V +L+ +Y +L A+++F + ++ VS NT+++G+++ G++ A
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
QLFD MP RDA+SW L+ G + E+A++ F M + D +++++ L+ACA L
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 257 GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML 316
G L G +HR++ + + + +S L+D Y++CG I A ++F ++ L +WN+++
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
VG A++G SL +F M + KPDGV+ GAL CSHAGLV++ +LFD M+SV+ +
Sbjct: 301 VGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
+ ++HYGC+ DL GRAG +E+AL MI++MPM + V LL CR HG+V +AE +
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
H+ KL PE Y +L+++YA +W+ +RR++ A ++K G S ++++G
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDG 474
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 217/359 (60%), Gaps = 1/359 (0%)
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL-YRDVVSCNTLIDGYVKAG 191
+HS +++ G D SL+ YC + A+ +FDE Y DVVS N +IDGYVK+G
Sbjct: 93 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKSG 152
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
DLA AR+LFD MP R+ VSW ++ YAQ Q EEAI++F M I+PD +AL+S LS
Sbjct: 153 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLS 212
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
AC LG ++ G+ +HR++ + + L ++D Y KCG + A+E+FE ++K++ T
Sbjct: 213 ACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVT 272
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W M+ G A+HGLG ++ F RM + + P+ +T L L CSH GL D R F M
Sbjct: 273 WTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMV 332
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S Y + ++HYGCM DLLGRAG + EA +I+ MP + +W LL R HG+ E+
Sbjct: 333 SQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELG 392
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E A H+++L+P + G Y +L+++YA +RW+ V ++R S+ ++ G S I ++G
Sbjct: 393 EQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDG 451
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ +P + S+ +I A+ P A+ +F +M+ I PD + +L A
Sbjct: 154 LARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSA 213
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L L + +H VL+ G ++ ++N+++ +Y ++ A E+F+ + + +V+
Sbjct: 214 CGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTW 273
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
T+I G+ G EA++LF M ++
Sbjct: 274 TTMIAGFALHG-------------------------------LGSEAVELFRRMEKENVS 302
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAI 298
P++I ++ LS C+ +G + G+ + + ++Q ++ + ++D + G + A
Sbjct: 303 PNDITFLAVLSVCSHVGLTDLGRWYFKTM-VSQYKIKPRVEHYGCMIDLLGRAGCLMEAR 361
Query: 299 EIFESSQEK-NLFTWNAMLVGLAMHG---LGRLSLVYF 332
+ + K N W A+L HG LG +L++
Sbjct: 362 GLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHL 399
>gi|115436706|ref|NP_001043111.1| Os01g0390600 [Oryza sativa Japonica Group]
gi|21328171|dbj|BAC00748.1| pentatricopeptide (PPR) repeat-containing-like protein [Oryza
sativa Japonica Group]
gi|113532642|dbj|BAF05025.1| Os01g0390600 [Oryza sativa Japonica Group]
Length = 657
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 243/433 (56%), Gaps = 5/433 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
++ A +F IP S+ T+I + L A+ + M TV I + L++
Sbjct: 225 INMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVK 284
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
ACS+ + S Q +H+ +LK GF FV +L+H Y + AQ F V S
Sbjct: 285 ACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFKLSDKSHVAS 344
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N L+ ++ + ARQLFD MP RD +SW TL++GY QS A+Q+FC+M+D +
Sbjct: 345 WNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGV 404
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ I L SALSA A G L Q + IH YI I++ LS GL++ YAKCG I A++
Sbjct: 405 EPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQ 464
Query: 300 IFESSQEKNLFT--WNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSH 356
+F ++K++ WN+++ LA+HG +SL FS++ IKP+ +T LG L C H
Sbjct: 465 LFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQSTTHIKPNSITYLGVLNACCH 524
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AG+V E ++ F+ M YG+ E+KHYGCM DLL RAG +EEA +IK MPM DV W
Sbjct: 525 AGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWG 584
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
+L R GNV + E AAE + KL P G L+++YA+A W +V +R+ L
Sbjct: 585 CILAAARTQGNVALGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRKELQNEN 644
Query: 477 IKKNAGCS-LIQL 488
+++ G S ++QL
Sbjct: 645 LERLTGSSGILQL 657
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 192/411 (46%), Gaps = 47/411 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + +P S+ T+I A + P A+ +F M T ++ P+ + +L A
Sbjct: 92 LERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAVFRDMLTEAVQPNEVTLAEVLTA 151
Query: 121 CSQLCSHSLAQTI---HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ C H + H ++ G V V +L+H Y ++ A+ +F+ + R+
Sbjct: 152 MA--CDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYGAVSQVPSARSIFELMPDRNT 209
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-D 236
V+ NT+++ YVKAG + A ++F +P RD VSW T++ GY +D +A++ + M+
Sbjct: 210 VTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGT 269
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN- 295
+ I+ + + LV + AC+R + +G+ +H I N +F+ L+ +Y C +I+
Sbjct: 270 VGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDH 329
Query: 296 ------------------------------TAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
A ++F+ E++ +W+ ++ G G
Sbjct: 330 AQMQFKLSDKSHVASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNS 389
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKEL----K 381
++L F M++A ++P+ +T+ AL +++G + +AR + D Y +S+ + K
Sbjct: 390 NMALQIFCSMLDAGVEPNEITLASALSAVANSGTLGQARWIHD-----YIISRSIQLTDK 444
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGG-DVFVWSGLLGGCRIHGNVEIA 431
+ ++ + G I EA+++ + V W+ ++ IHG V ++
Sbjct: 445 LSAGLINVYAKCGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMS 495
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 156/383 (40%), Gaps = 76/383 (19%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYC-VFHRLRDAQELFDEI--L 173
L++ + SH + +H+ K G + ++FV NSL+ Y V L A LFDEI L
Sbjct: 17 LKSAAARLSH--GEQLHALAAKSGLLTSNLFVRNSLLAFYSRVAPSL--AYHLFDEIPPL 72
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
RD + N L+ +AG L A+ L MP RDAVS+ T+++ ++S E A+ +F +
Sbjct: 73 LRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAVFRD 132
Query: 234 MMDLDIKPDNIALVSALSACA---------------------------------RLGELE 260
M+ ++P+ + L L+A A G +
Sbjct: 133 MLTEAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYGAVS 192
Query: 261 QGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLA 320
Q + EL R ++ +++ Y K G IN A E+F E++ +W M+ G
Sbjct: 193 QVPSARSIFELMPDR-NTVTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYM 251
Query: 321 MHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKL--------FDEME 371
+L + M+ I+ + V ++G + CS V E ++L FD
Sbjct: 252 CADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHA 311
Query: 372 SV-------YGVSKELKHY----------------GCMADLLGRAGLIEEALEMIKKMPM 408
V YG + H MA LL R L+ EA ++ MP
Sbjct: 312 FVQATLIHYYGSCDFIDHAQMQFKLSDKSHVASWNALMASLL-RRNLVHEARQLFDDMP- 369
Query: 409 GGDVFVWSGLLGGCRIHGNVEIA 431
D WS L+ G GN +A
Sbjct: 370 ERDTISWSTLISGYVQSGNSNMA 392
>gi|125570503|gb|EAZ12018.1| hypothetical protein OsJ_01900 [Oryza sativa Japonica Group]
Length = 657
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 243/433 (56%), Gaps = 5/433 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
++ A +F IP S+ T+I + L A+ + M TV I + L++
Sbjct: 225 INMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVK 284
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
ACS+ + S Q +H+ +LK GF FV +L+H Y + AQ F V S
Sbjct: 285 ACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFKLSDKSHVAS 344
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N L+ ++ + ARQLFD MP RD +SW TL++GY QS A+Q+FC+M+D +
Sbjct: 345 WNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGV 404
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ I L SALSA A G L Q + IH YI I++ LS GL++ YAKCG I A++
Sbjct: 405 EPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQ 464
Query: 300 IFESSQEKNLFT--WNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSH 356
+F ++K++ WN+++ LA+HG +SL FS++ IKP+ +T LG L C H
Sbjct: 465 LFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQSTTHIKPNSITYLGVLNACCH 524
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AG+V E ++ F+ M YG+ E+KHYGCM DLL RAG +EEA +IK MPM DV W
Sbjct: 525 AGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWG 584
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
+L R GNV + E AAE + KL P G L+++YA+A W +V +R+ L
Sbjct: 585 CILAAARTQGNVALGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRKELQNEN 644
Query: 477 IKKNAGCS-LIQL 488
+++ G S ++QL
Sbjct: 645 LERLTGSSGILQL 657
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 192/411 (46%), Gaps = 47/411 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + +P S+ T+I A + P A+ +F M T ++ P+ + +L A
Sbjct: 92 LERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAVFRDMLTEAVQPNEVTLAEVLTA 151
Query: 121 CSQLCSHSLAQTI---HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ C H + H ++ G V V +L+H Y ++ A+ +F+ + R+
Sbjct: 152 MA--CDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYGAVSQVPSARSIFELMPDRNT 209
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-D 236
V+ NT+++ YVKAG + A ++F +P RD VSW T++ GY +D +A++ + M+
Sbjct: 210 VTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGT 269
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN- 295
+ I+ + + LV + AC+R + +G+ +H I N +F+ L+ +Y C +I+
Sbjct: 270 VGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDH 329
Query: 296 ------------------------------TAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
A ++F+ E++ +W+ ++ G G
Sbjct: 330 AQMQFKLSDKSHVASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNS 389
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKEL----K 381
++L F M++A ++P+ +T+ AL +++G + +AR + D Y +S+ + K
Sbjct: 390 NMALQIFCSMLDAGVEPNEITLASALSAVANSGTLGQARWIHD-----YIISRSIQLTDK 444
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGG-DVFVWSGLLGGCRIHGNVEIA 431
+ ++ + G I EA+++ + V W+ ++ IHG V ++
Sbjct: 445 LSAGLINVYAKCGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMS 495
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 156/383 (40%), Gaps = 76/383 (19%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYC-VFHRLRDAQELFDEI--L 173
L++ + SH + +H+ K G + ++FV NSL+ Y V L A LFDEI L
Sbjct: 17 LKSAAARLSH--GEQLHALAAKSGLLTSNLFVRNSLLAFYSRVAPSL--AYHLFDEIPPL 72
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
RD + N L+ +AG L A+ L MP RDAVS+ T+++ ++S E A+ +F +
Sbjct: 73 LRDATAQNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAVFRD 132
Query: 234 MMDLDIKPDNIALVSALSACA---------------------------------RLGELE 260
M+ ++P+ + L L+A A G +
Sbjct: 133 MLTEAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYGAVS 192
Query: 261 QGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLA 320
Q + EL R ++ +++ Y K G IN A E+F E++ +W M+ G
Sbjct: 193 QVPSARSIFELMPDR-NTVTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYM 251
Query: 321 MHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKL--------FDEME 371
+L + M+ I+ + V ++G + CS V E ++L FD
Sbjct: 252 CADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHA 311
Query: 372 SV-------YGVSKELKHY----------------GCMADLLGRAGLIEEALEMIKKMPM 408
V YG + H MA LL R L+ EA ++ MP
Sbjct: 312 FVQATLIHYYGSCDFIDHAQMQFKLSDKSHVASWNALMASLL-RRNLVHEARQLFDDMP- 369
Query: 409 GGDVFVWSGLLGGCRIHGNVEIA 431
D WS L+ G GN +A
Sbjct: 370 ERDTISWSTLISGYVQSGNSNMA 392
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 262/487 (53%), Gaps = 73/487 (14%)
Query: 71 IPYPST---FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
+P P++ F +NT+IR H +SP NA+ F+ MR ++ PD Y+FP +L+AC+ C
Sbjct: 70 LPGPASRDAFPWNTLIRLHAP-ASPRNALAYFACMRRAAVEPDAYTFPAVLKACA--CG- 125
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L +H++ ++ G D+F N+L+ YC R +++FD RD+VS N+++ GY
Sbjct: 126 VLGLPVHAEAVRTGMDGDLFTRNALVSFYCRIGDCRSGRKVFDHG-ARDLVSWNSMVAGY 184
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGT--------------------------------LV 215
V G+L A++LFD MP RDA SW T ++
Sbjct: 185 VACGELELAQELFDGMPLRDAFSWATMIDAYGKRSGGVDRARELFDETPNRDLVCWCSMI 244
Query: 216 AGYAQSDQCEEAIQLFCNMMDLD-------------------------------IKPDNI 244
GYA+ + +EA LF M + + IKPD +
Sbjct: 245 DGYARQGRMDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLRCGIKPDRV 304
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
A V A +ACA+LG LEQG+ +H Y+E ++ D + T L+D Y KCG ++ IFES
Sbjct: 305 AAVGAFTACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDLGKLIFESM 364
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKP-DGVTILGALVGCSHAGLVDEA 363
+K++ TWN M++GL H G ++ F +M EA P D +++L L C+HAGL+ E
Sbjct: 365 PDKSVVTWNVMIIGLGTHSCGLHAVKLFYQM-EAEGAPIDDLSVLAVLTACTHAGLISEG 423
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+F M +G+ +++HYG + DLLGRAG ++ A I+ MPM +W LL CR
Sbjct: 424 LGIFHRMRKDFGMDPKVEHYGALVDLLGRAGHLDHARHAIETMPMEPTPELWGSLLAACR 483
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
H VE+AE + E + L +D GVY +L+++YA+ W+ V +IRR + A +KK+ G
Sbjct: 484 SHRCVELAELSVERLASLGADDFGVYVLLSNIYADEGMWDGVFRIRRLMSAEGMKKDIGR 543
Query: 484 SLIQLNG 490
S+I+++G
Sbjct: 544 SVIEVDG 550
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 117/292 (40%), Gaps = 37/292 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A ++F +P + S++ ++ + P A+ LF +M I PD + A
Sbjct: 253 MDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLRCGIKPDRVAAVGAFTA 312
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL + + +HS + K + DV V +L
Sbjct: 313 CAQLGALEQGRWLHSYLEKKKVLFDVVVQTAL---------------------------- 344
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
ID Y+K G L + +F+ MP + V+W ++ G A++LF M
Sbjct: 345 ---IDMYMKCGRLDLGKLIFESMPDKSVVTWNVMIIGLGTHSCGLHAVKLFYQMEAEGAP 401
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTA 297
D++++++ L+AC G + +G I + + +V+ + LVD + G+++ A
Sbjct: 402 IDDLSVLAVLTACTHAGLISEGLGIFHRMRKDFGMDPKVEHY--GALVDLLGRAGHLDHA 459
Query: 298 IEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
E+ E W ++L H L+ + R+ GV +L
Sbjct: 460 RHAIETMPMEPTPELWGSLLAACRSHRCVELAELSVERLASLGADDFGVYVL 511
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/503 (34%), Positives = 262/503 (52%), Gaps = 55/503 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSA-----SSPTTDPLSY 63
+ K ++ QIH H L G + ++ T+++ + A S D +SY
Sbjct: 78 KSKAFEEGQQIHGHVLKLG--YEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSY 135
Query: 64 ---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
A +F+ IP S+N +I + S A+ LF +M ++
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD + +L AC+Q S L + +HS + GF ++ ++N+L
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNAL---------------- 239
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
ID Y K G + A LF+ + +D VSW TL+ GY + +EA+
Sbjct: 240 ---------------IDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEAL 284
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVD 286
LF M+ P+++ +VS L ACA LG ++ G+ IH YI+ L + L T L+D
Sbjct: 285 LLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLID 344
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAKCG I A ++F S K+L +WNAM+ G AMHG FSRM + I+PD +T
Sbjct: 345 MYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDIT 404
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L CSH+G +D R +F M Y ++ +L+HYGCM DLLG +GL +EA EMIK M
Sbjct: 405 FVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTM 464
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
PM D +W LL CR HGN+E+AE+ A ++MK++PE+ G Y +L+++YA A W++V
Sbjct: 465 PMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVA 524
Query: 467 KIRRSLDAGKIKKNAGCSLIQLN 489
K+R L+ +KK GCS I+++
Sbjct: 525 KVRALLNGKGMKKVPGCSSIEID 547
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 218/379 (57%), Gaps = 14/379 (3%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
SP D YA+S+F I P+ +NT++R + L S P++A+ L+ M ++ + P+ Y+F
Sbjct: 10 SPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTF 69
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
PFLL++C++ + Q IH VLKLG+ D++V SL+ +Y RL DA ++FD +
Sbjct: 70 PFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSH 129
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS LI GY +G++ A+++FD +P +D VSW +++GYA++ +EA++LF M
Sbjct: 130 RDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEM 189
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
M +++PD +V+ LSACA+ +E G+ +H +I+ + + + L+D Y+KCG +
Sbjct: 190 MKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQV 249
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
TA +FE K++ +WN ++ G L + +L+ F M+ + P+ VTI+ L C
Sbjct: 250 ETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPAC 309
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHY-------GCMADLLGRAGLIEEALEMIKKMP 407
+H G +D R + VY + K+LK + D+ + G IE A ++ M
Sbjct: 310 AHLGAIDIGRWIH-----VY-IDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM- 362
Query: 408 MGGDVFVWSGLLGGCRIHG 426
+ + W+ ++ G +HG
Sbjct: 363 LHKSLSSWNAMIFGFAMHG 381
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 262/475 (55%), Gaps = 43/475 (9%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
++ QIHA + G+ +P +++A+ + + P+S+A IFN I P
Sbjct: 50 KLKQIHAFSIRHGVPPQNP-DFNKHLIFALVSL----------SAPMSFAAQIFNQIQAP 98
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLCSHSLAQTI 133
+ F++NT+IR +P AV LFSQM S I PD ++FPFL +A ++L SL + I
Sbjct: 99 NIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGI 158
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
HS V++ GF FV NSL+H+Y VF G+ ++
Sbjct: 159 HSVVVRNGFDSLRFVQNSLVHMYSVF--------------------------GFAES--- 189
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A Q+F+ M +RD V+W +++ G+A + EA+ L+ M ++PD +VS LSAC
Sbjct: 190 --AYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSAC 247
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
LG L G+ +H Y+ + + S L+D Y+KCG A ++F+ +E+++ +W
Sbjct: 248 VELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWT 307
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+++VGLA++GLG +L F + +KP +T +G L CSH G++DE F M+
Sbjct: 308 SLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEE 367
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ ++H+GCM DLL RAG + +A + I+ MP+ + +W LLG C IHG++E+ E
Sbjct: 368 YGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEV 427
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
A + +L+ G + +L+++YA+ RW DV +R+ + +KK G SL++L
Sbjct: 428 ARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVEL 482
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 243/434 (55%), Gaps = 7/434 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + + S+N++I + A+ +F M + PD + ++ AC+
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACAS 265
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + + Q +H +V+K + D+ + N+ + +Y R+++A+ +FD + R+V++ +
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I GY A AR +F +M R+ VSW L+AGY Q+ + EEA+ LFC + + P
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDS------FLSTGLVDFYAKCGYINT 296
+ + + L ACA L EL G H ++ + + S F+ L+D Y KCG +
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+F E++ +WNAM++G A +G G +L F M+E+ KPD +T++G L C H
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGH 505
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AG V+E R F M +GV+ HY CM DLLGRAG +EEA MI++MPM D +W
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C++H N+ + + AE +++++P + G Y +L+++YA +WEDV+ +R+S+
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEG 625
Query: 477 IKKNAGCSLIQLNG 490
+ K GCS I++ G
Sbjct: 626 VTKQPGCSWIKIQG 639
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 158/301 (52%), Gaps = 3/301 (0%)
Query: 110 DFYSFPFLLRAC--SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
D F LL +C S+L S + +H+ V+K GF ++F+ N L+ Y L D ++
Sbjct: 18 DSSPFAKLLDSCIKSKL-SAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
+FD++ R++ + N+++ G K G L A LF MP RD +W ++V+G+AQ D+CEEA
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+ F M + + S LSAC+ L ++ +G +H I + D ++ + LVD
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y+KCG +N A +F+ ++N+ +WN+++ +G +L F M+E+R++PD VT+
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
+ C+ + +++ + + ++ D+ + I+EA + MP
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 408 M 408
+
Sbjct: 317 I 317
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 36/308 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A S+F ++P ++N+++ A+ F+ M + YSF +L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L + +HS + K F+ DV++ ++L+ +Y + DAQ +FDE+ R+VVS
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI + + G EA+ +F M++ ++
Sbjct: 222 NSLITCFEQNGPAV-------------------------------EALDVFQMMLESRVE 250
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + L S +SACA L ++ G+ +H R ++ +++R D LS VD YAKC I A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF+S +N+ +M+ G AM + + + F++M E + V+ + G + G
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGE 366
Query: 360 VDEARKLF 367
+EA LF
Sbjct: 367 NEEALSLF 374
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 267 RYIELNQIRV----DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
RY+ + I+ + F+ L+D Y+KCG + ++F+ ++N++TWN+++ GL
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G + F M E D T + G + +EA F M V L
Sbjct: 100 GFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV---LNE 152
Query: 383 YGCMADLLGRAGLIE-----EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
Y + L +GL + + +I K P DV++ S L+ GNV A+
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQ 207
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 248/428 (57%), Gaps = 2/428 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P + +N ++R + AV L QM + PD + + ACS+
Sbjct: 103 ARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSR 162
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
SL + IH + + F ++ V N+L+ +Y L +A +LF+++ R+++S L
Sbjct: 163 ARDLSLGRRIHVYMDNV-FGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTIL 221
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY AG L AR LF++ +D + W ++ Q EEA+ LF +M ++PD
Sbjct: 222 VSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDR 281
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+V+ L+ CA LG L+QG+ IH+Y E ++++D+ L T L+D Y+KCG+I ++E+F
Sbjct: 282 FTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWR 341
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
Q ++ W A++ GLA +G +L F M +++KPDGVT +G L C H GLVDE
Sbjct: 342 MQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEG 401
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF-VWSGLLGGC 422
RK F M VY + ++HY C+ +LLGRAGL++EA +I +P+ D ++ LL C
Sbjct: 402 RKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTAC 461
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+ HGNVE++E + + + + V ++++VYA A RWEDV+++R + +KKNAG
Sbjct: 462 KAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAG 521
Query: 483 CSLIQLNG 490
CSLI++ G
Sbjct: 522 CSLIEVKG 529
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 178/409 (43%), Gaps = 83/409 (20%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
N +IR S + ++ +R + D +++PF+LRA L + H+ +K
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVK 77
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
GF D + +SLM +Y + R+ A+++FDE+ R +V N ++ Y++ G
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCG-------- 129
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
W + A A S+Q E + + PD + LV+A++AC+R +L
Sbjct: 130 -----------WYS--AAVALSEQMERS----------GVTPDRVTLVTAVTACSRARDL 166
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE----------------- 302
G+ IH Y++ N + ++ L+D Y K + A+++FE
Sbjct: 167 SLGRRIHVYMD-NVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGY 225
Query: 303 --------------SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+EK+L W AM+ HG +L F M R++PD T++
Sbjct: 226 GLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVV 285
Query: 349 GALVGCSHAGLVD---------EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
L C++ G +D E RK+ ++++V G + + D+ + G IE++
Sbjct: 286 TLLTCCANLGALDQGEWIHQYAEQRKM--KIDAVLGTA--------LIDMYSKCGHIEKS 335
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
LE+ +M G D W+ ++ G +G A + + + K + GV
Sbjct: 336 LEVFWRM-QGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGV 383
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 36/240 (15%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +FN + +I A A+ LF M+ + PD ++ LL
Sbjct: 231 LDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTC 290
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + IH + M + D V
Sbjct: 291 CANLGALDQGEWIHQ-----------YAEQRKMKI--------------------DAVLG 319
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
LID Y K G + + ++F RM RDA +W ++ G A + Q A++LF +M +K
Sbjct: 320 TALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVK 379
Query: 241 PDNIALVSALSACARLGELEQG-KNIHRYIELNQI--RVDSFLSTGLVDFYAKCGYINTA 297
PD + + LSAC G +++G K H E+ QI RV+ + + LV+ + G ++ A
Sbjct: 380 PDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHY--SCLVNLLGRAGLLDEA 437
>gi|449434472|ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like [Cucumis sativus]
Length = 575
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 279/511 (54%), Gaps = 39/511 (7%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ ++ C++++++ Q H H +T GL + +L + F I Y
Sbjct: 53 HSLLQSCQSVRELFQFHGHLITSGLF--NDHFWANRVLLQASEFGDIV-----------Y 99
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+ IF +I P+TF N +I+A++L + PL AV ++ + + PD Y+F L AC+
Sbjct: 100 TVLIFRHIKVPNTFCVNRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACAS 159
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + H Q K G + + NSL+H+Y + +++FDE+ +D+VS N++
Sbjct: 160 FGCGASGRKCHGQAFKNGVDSVMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLVSWNSI 219
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ Y + GDL A +FD MP R+ VSW +++ Y + A++LF NM+++ I+ +N
Sbjct: 220 VTAYARVGDLYTAHDMFDVMPERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNN 279
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+V+ LSAC+R L +G+++H ++ ++ F++T LVD Y+KC ++ A +F+
Sbjct: 280 TTMVNVLSACSRSARLNEGRSVHGFMYRASMKFCVFINTALVDMYSKCHRVSVARRVFDR 339
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI---------------------EARIKP 342
+NL TWNAM++G ++HG + L F M+ + ++ P
Sbjct: 340 LMIRNLVTWNAMILGHSLHGNPKDGLELFEEMVGELREINEETGNGKKFKQDEGKRKVFP 399
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
D +T +G L C+ AGL+ +A FDEM +V+ V HY C+A++ GLIE+A+E+
Sbjct: 400 DQITFIGVLCACARAGLLKDAENYFDEMINVFLVRPNFGHYWCLANVYVAVGLIEQAVEI 459
Query: 403 IKKMPMGGDVF-----VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
++ MP + F VW LL CR G+V + E A++++ ++P++ Y++L ++YA
Sbjct: 460 LRNMPEDNEDFSSESVVWIDLLTTCRFVGDVSLGEQIAKYLIDMEPKNDSYYRLLLNIYA 519
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
A RWEDV +I+ + ++ +GC L+ L
Sbjct: 520 VAGRWEDVSRIKLLMKEKRLGTMSGCRLVDL 550
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/431 (37%), Positives = 239/431 (55%), Gaps = 2/431 (0%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
T + A +F+ + F++ +I + A+ +FS MR P D +
Sbjct: 216 TGMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSV 275
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ AC++ + H V++ G V V N+L+H+Y + A+ LFD D
Sbjct: 276 VAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDH 335
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
S N++I GY+K G + A+ LF+ MP +D VSW ++AG Q++Q EA+ +F NM
Sbjct: 336 FSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAH 395
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+IKPD + LVS +SAC L LEQGK +H YI Q + L T L+D Y KCG + A
Sbjct: 396 EIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAA 455
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK-PDGVTILGALVGCSH 356
+E+F+ +EK WNA++VGLAM+GL SL FS M + I P +T G L C H
Sbjct: 456 LEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACRH 515
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
GLV+E R+ F M++ Y + ++HYGCM DLLGRAG + EA ++I+ MPM DV W
Sbjct: 516 GGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAWG 575
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG C H + E+ E + ++KL P G +L+++YA+ W+ V +R S+
Sbjct: 576 ALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVKDLRGSMKQ-H 634
Query: 477 IKKNAGCSLIQ 487
+ K AGCS+++
Sbjct: 635 VAKVAGCSVVE 645
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 185/401 (46%), Gaps = 44/401 (10%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L+ + RC++ + + +IHA FL GLL + + + +L T+ ++A+ PL
Sbjct: 7 LDAQLSRCRSARHLLEIHAQFLASGLL--ADAYAASRLLLFTTS----ATAARLLPQPLH 60
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
++L +F + P+ F+ NT+IRA P L++ M PD Y+ P L AC+
Sbjct: 61 HSLQLFRLVRSPNAFTCNTLIRAALRQGLPHLCFPLYASMPAA---PDTYTHPLLAAACA 117
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ +HS +K GF ++++ N+LMH+Y + A+ +FD D VS NT
Sbjct: 118 ARGDAREGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWDAVSWNT 177
Query: 183 LIDGYVKAGDLAHARQLFDRMP-------------------------------FRDAVSW 211
++ YV+ GD+ A +F RMP RDA +W
Sbjct: 178 ILATYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAFTW 237
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
+++ + ++D EA+ +F +M + D +VS ++ACA+ ++ G+ H +
Sbjct: 238 TAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVR 297
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
+ + L+ Y+ C + A +F+SS+ + F+WN+M+ G +G +
Sbjct: 298 AGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKAL 357
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
F+ M + D V+ + GC EA +FD M +
Sbjct: 358 FNVMPD----KDNVSWSAMIAGCVQNNQSSEALTVFDNMRA 394
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 259/486 (53%), Gaps = 43/486 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +KRCK++++ Q+HAH L GL + S C A++ + + YA
Sbjct: 35 SLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRW-----------GSMEYA 83
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SIF I P +F YNT+IR + + A++L+ +M I PD +++PF+L+ACS L
Sbjct: 84 CSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLL 143
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ IH+ V K G DVFV N L I
Sbjct: 144 GALKEGVQIHAHVFKAGLEGDVFVQNGL-------------------------------I 172
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDN 243
+ Y K G + HA +F++M + SW +++ +A + E + L +M + + +
Sbjct: 173 NMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEE 232
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVSALSAC LG G+ IH + N ++ + T L+D Y K G + + +F++
Sbjct: 233 SILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQN 292
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+KN +++ ++ GLA+HG GR +L FS M+E + PD V +G L CSHAGLV+E
Sbjct: 293 MAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLVNEG 352
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F+ ++ + + ++HYGCM DL+GRAG+++ A ++IK MP+ + VW LL C+
Sbjct: 353 LQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACK 412
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H N+EI E AAE++ KL + G Y VLA++YA A +W DV +IR + + + G
Sbjct: 413 VHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAEKHLVQTPGF 472
Query: 484 SLIQLN 489
SL++ N
Sbjct: 473 SLVEAN 478
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA--KCGYINTAIEIFESS 304
V LS R +E+ K +H +I + DSF + LV A + G + A IF
Sbjct: 31 VQGLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQI 90
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+E F +N M+ G +L+ + M+E I+PD T L CS G + E
Sbjct: 91 EEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGV 150
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++ + G+ ++ + ++ G+ G IE A + ++M V WS ++G
Sbjct: 151 QIHAHVFKA-GLEGDVFVQNGLINMYGKCGAIEHASVVFEQMD-EKSVASWSSIIGA--- 205
Query: 425 HGNVEI 430
H +VE+
Sbjct: 206 HASVEM 211
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/447 (33%), Positives = 249/447 (55%), Gaps = 35/447 (7%)
Query: 52 SASSPTTDPLSYALSIF----NNIPYPS--TFSYNTIIRA--HTLFSSPLNAVVLFSQMR 103
+A+S + + YA S+ P PS F +NT+IRA T S P +A+ ++ MR
Sbjct: 161 AATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIRAFAQTTHSKP-HALRFYNTMR 219
Query: 104 TVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR 163
++ P+ ++FPF+L+AC+ + L +H+ ++K GF D V N+L+H+YC
Sbjct: 220 RHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCC----- 274
Query: 164 DAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQ 223
C G V A +++FD P +D+V+W ++ GYA++
Sbjct: 275 ---------------CCQDGSSGPVSA------KKVFDESPVKDSVTWSAMIGGYARAGN 313
Query: 224 CEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG 283
A+ LF M + PD I +VS LSACA LG LE GK + YIE I L
Sbjct: 314 SARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNA 373
Query: 284 LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
L+D +AKCG ++ A+++F + + + +W +M+VGLAMHG G +++ F M+E + PD
Sbjct: 374 LIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPD 433
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
V +G L CSH+GLVD+ F+ ME+++ + +++HYGCM D+L RAG + EALE +
Sbjct: 434 DVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFV 493
Query: 404 KKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWE 463
+ MP+ + +W ++ C G +++ E+ A+ +++ +P Y +L+++YA RWE
Sbjct: 494 RAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWE 553
Query: 464 DVVKIRRSLDAGKIKKNAGCSLIQLNG 490
K+R +D ++K G ++I++N
Sbjct: 554 KKTKVREMMDVKGMRKIPGSTMIEMNN 580
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/426 (37%), Positives = 244/426 (57%), Gaps = 23/426 (5%)
Query: 76 TFSYNTIIRA--HTLFSSPL--NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
+F +N IIRA H + SSP + + ++ +MR + PDF++FPFLL + L Q
Sbjct: 24 SFLWNIIIRAIVHNV-SSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
H+Q+L G D FV SL+++Y LR AQ +FD+ +D+ + N++++ Y KAG
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-----DLDIKPDNIAL 246
+ AR+LFD MP R+ +SW L+ GY + +EA+ LF M + ++P+ +
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES-SQ 305
+ LSAC RLG LEQGK +H YI+ + +D L T L+D YAKCG + A +F +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSHAGLVDEAR 364
+K++ ++AM+ LAM+GL FS M + I P+ VT +G L C H GL++E +
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F M +G++ ++HYGCM DL GR+GLI+EA I MPM DV +W LL G R+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
G+++ E A + +++L P + G Y +L++VYA RW + I K GCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME-----------GINKVPGCS 431
Query: 485 LIQLNG 490
+++ G
Sbjct: 432 YVEVEG 437
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 266/474 (56%), Gaps = 20/474 (4%)
Query: 33 PCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY---PSTFSYNTIIRAHTLF 89
P H T + F P +S P ++P N P+ S F+ N++ L+
Sbjct: 5 PSHTATPSQLQLPPFTP---SSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSV-DPIVLW 60
Query: 90 SSPL----------NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL--AQTIHSQV 137
+S L A F++MR + P+ +F LL AC+ S S A ++H
Sbjct: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
Query: 138 LKLGF-ICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
K G V V +L+ +Y +L A+++F + ++ VS NT+++G+++ G++ A
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
QLFD MP RDA+SW L+ G + E+A++ F M + D +++++ L+ACA L
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 257 GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML 316
G L G +HR++ + + + +S L+D Y++CG I A ++F ++ L +WN+++
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
VG A++G SL +F M + KPDGV+ GAL CSHAGLV++ +LFD M+SV+ +
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
+ ++HYGC+ DL GRAG +E+AL MI++MPM + V LL CR HG+V +AE +
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
H+ KL PE Y +L+++YA +W+ +RR++ A ++K G S ++++G
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDG 474
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 260/490 (53%), Gaps = 32/490 (6%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
+ +HAH + G L SP H+ + AS +++ LSYA + P
Sbjct: 1226 HLRALHAHLVVSGRL-ASPSHLAAFL------------ASLASSNHLSYARLVLPQRPA- 1271
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR--------------A 120
+ ++N IRA P A F+ R + +PPD YS FL+R
Sbjct: 1272 TLLAHNAFIRALARGPRPCLA---FAAFRDLPLPPDHYSLNFLVRAATALVASAAEEKHV 1328
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+++ + A + H ++ G D V + ++ +Y + ++ F EI DVV
Sbjct: 1329 SAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCV 1388
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++ GD+ AR LFD MP RD V+W ++AGY + EA+ LF M+
Sbjct: 1389 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTT 1448
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
LVS L+ACA++G L++GK +H Y+ +++ L T LVD Y+KCG + TA+E+
Sbjct: 1449 VGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEV 1508
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FES E+N++TW + + GLAM+G+G L F RM A I+P+GV+ + L GCS AGLV
Sbjct: 1509 FESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLV 1568
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE R FD M+ YGV +HYGCM DL GRAG +++A+ I MPM VW LL
Sbjct: 1569 DEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLN 1627
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
RIH +V++ + A + ++ ++ E+ + L+++YA + W+ V ++R + A +KK
Sbjct: 1628 ASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKV 1687
Query: 481 AGCSLIQLNG 490
G S I+++G
Sbjct: 1688 PGWSTIEVDG 1697
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 238/425 (56%), Gaps = 35/425 (8%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + S+ +I + A+ LF +M V P+ +F +L AC ++
Sbjct: 162 VFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDVV---PNVATFVSVLVACGRMGY 218
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S+ + +H V K F + V N L+D
Sbjct: 219 LSMGKGVHGLVYKRAFGIGLVV-------------------------------GNALVDM 247
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YVK L AR+LFD +P RD VSW ++++G Q Q +++++LF +M ++PD I L
Sbjct: 248 YVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIIL 307
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S LSACA LG L+ G+ + YIE I D + T LVD YAKCG I A+ IF
Sbjct: 308 TSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPN 367
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+N+FTWNA+L GLAMHG G +L +F MI A I+P+ VT L L C H+GLV E R
Sbjct: 368 RNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSY 427
Query: 367 FDEMESV-YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F +M S + S L+HYGCM DLL RAGL++EA + I+ MP+ DV +W LL C+ +
Sbjct: 428 FYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKAN 487
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
GNVE+++ H+++LK +D GVY +L+++YA +RW+DV ++RR + I+K G S+
Sbjct: 488 GNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSV 547
Query: 486 IQLNG 490
I+++G
Sbjct: 548 IEVDG 552
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 199/428 (46%), Gaps = 49/428 (11%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
+ L N I RCKTI+ + QIHAH + GLL + +S
Sbjct: 6 LRLLNSIHRCKTIRSLKQIHAHLIASGLL------------HDEFVLSKVSEFFGKHIGF 53
Query: 61 LSYALSIFNNIP-YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+ YA N + T YNT+I A+ +P A +++ ++ PD Y+FP +L+
Sbjct: 54 VDYAFDFLNQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLK 113
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC++ + +H +K+GF+CD++V NSL+H Y V
Sbjct: 114 ACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSV--------------------- 152
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
G A ++FD M RD VSW L++GY ++ +EAI LF M D+
Sbjct: 153 ----------CGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKM---DV 199
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P+ VS L AC R+G L GK +H + + + LVD Y KC + A +
Sbjct: 200 VPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARK 259
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ ++++ +W +++ GL + SL F M + ++PD + + L C+ G
Sbjct: 260 LFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGA 319
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+D R + + +E G+ ++ + D+ + G IE AL + +P ++F W+ LL
Sbjct: 320 LDYGRWVQEYIER-QGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIP-NRNIFTWNALL 377
Query: 420 GGCRIHGN 427
GG +HG+
Sbjct: 378 GGLAMHGH 385
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 122/294 (41%), Gaps = 40/294 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P S+ +II P +++ LF M+ + PD +L A
Sbjct: 254 LCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSA 313
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + + + + G D+ +
Sbjct: 314 CASLGALDYGRWVQEYIERQGIEWDIHI-------------------------------G 342
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D Y K G + A +F+ +P R+ +W L+ G A EA++ F M+ I+
Sbjct: 343 TALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIR 402
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQ-----IRVDSFLSTGLVDFYAKCGYIN 295
P+ + ++ L+AC G + +G++ + Y ++Q R++ + ++D + G ++
Sbjct: 403 PNEVTFLAILTACCHSGLVAEGRS-YFYQMISQPFNFSPRLEHY--GCMIDLLCRAGLLD 459
Query: 296 TAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
A + + ++ W A+L +G LS S ++E + + GV +L
Sbjct: 460 EAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVL 513
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 266/511 (52%), Gaps = 56/511 (10%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSAS---- 54
T +K C + H QIHAH L G F+S I T+++ +++A
Sbjct: 131 TFPFLLKSCAKLASAHEGKQIHAHVLKLG--FVSDVFIHTSLINMYAQSGEMNNAQLVFD 188
Query: 55 -SPTTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVL 98
S D +S+ A +F+ +P S+N +I + A++L
Sbjct: 189 QSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLL 248
Query: 99 FSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV 158
F MR ++PP+ + +L AC+Q + L ++ S + G ++ ++N+L
Sbjct: 249 FEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNAL------ 302
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
ID Y K GDL AR+LFD M RD +SW ++ GY
Sbjct: 303 -------------------------IDMYSKCGDLQTARELFDDMLERDVISWNVMIGGY 337
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
+EA+ LF M+ ++P I +S L +CA LG ++ GK IH YI N V +
Sbjct: 338 THMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVST 397
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
LST L+D YAKCG I A ++F+ + K+L +WNAM+ GLAMHG + FS+M
Sbjct: 398 SLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSD 457
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEE 398
I+P+ +T +G L C HAGLVD ++ F M Y +S + +HYGCM DLLGRAGL EE
Sbjct: 458 GIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEE 517
Query: 399 ALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYAN 458
A +++ M + D +W LLG CR HG VE+ E AE + +L+P++ G Y +L+++YA
Sbjct: 518 AESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAG 577
Query: 459 ADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
A +W+DV +IR L+ +KK GC+ I+++
Sbjct: 578 AGKWDDVARIRTRLNDRGMKKVPGCTTIEVD 608
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 243/465 (52%), Gaps = 54/465 (11%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ +C++I+ QIHAH + GL L+A++ S+ S + +SYA+
Sbjct: 35 LLSKCQSIRTFKQIHAHIIKTGL---------HNTLFALSKLIEFSAVS--RSGDISYAI 83
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
S+FN+I P+ F +N++IR ++ SP A+V F +M + P+ Y+FPFLL++C++L
Sbjct: 84 SLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLA 143
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S + IH+ VLKLGF+ DVF+ SL+++Y + +AQ +FD+ +RD +S LI
Sbjct: 144 SAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIA 203
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY G + ARQLFD MP +D VSW ++AGYAQ + +EA+ LF +M ++ P+
Sbjct: 204 GYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNEST 263
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+VS LSACA+ L+ G ++ +IE + + L L+D Y+KCG + TA E+F+
Sbjct: 264 IVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDML 323
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD---- 361
E+++ +WN M+ G + +L F M+ + ++P +T L L C+H G +D
Sbjct: 324 ERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKW 383
Query: 362 -------------------------------EARKLFDEMESVYGVSKELKHYGCMADLL 390
AR++FD M+ K L + M L
Sbjct: 384 IHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK-----IKSLASWNAMICGL 438
Query: 391 GRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCRIHGNVEIAE 432
G ++A E+ KM G + + G+L C+ G V++ +
Sbjct: 439 AMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQ 483
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 243/428 (56%), Gaps = 33/428 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ IP S+N +I + A+ LF +M +++ PD ++ +L AC+
Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAH 208
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S L + +HS V GF ++ ++N+L
Sbjct: 209 SGSIELGRQVHSWVDDHGFDSNLKIVNAL------------------------------- 237
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G++ A LF + ++D +SW TL+ GY + +EA+ LF M+ P++
Sbjct: 238 IDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 297
Query: 244 IALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ ++S L ACA LG ++ G+ IH YI+ L + S L T L+D YAKCG I A ++F
Sbjct: 298 VTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 357
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
S K+L +WNAM+ G AMHG S FSRM + I+PD +T +G L CSH+G++D
Sbjct: 358 NSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLD 417
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI M M D +W LL
Sbjct: 418 LGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA 477
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C++HGNVE+AE+ A++++K++PE+ Y +L+++YA+A RWEDV +IR L+ +KK
Sbjct: 478 CKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVP 537
Query: 482 GCSLIQLN 489
GCS I+++
Sbjct: 538 GCSSIEVD 545
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 219/376 (58%), Gaps = 2/376 (0%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
SP D L YA S+F I P+ +NT+IR H L S P++++ L+ M ++ + P+ Y+F
Sbjct: 8 SPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTF 67
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
PFLL++C++ + + Q IH QVLKLGF D++V SL+ +Y RL DA ++FD +
Sbjct: 68 PFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSH 127
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS LI GY GD+ A++LFD +P +D VSW +++GYA++ +EA++LF M
Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
M ++++PD V+ LSACA G +E G+ +H +++ + + + L+D Y+KCG +
Sbjct: 188 MKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEV 247
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
TA +F+ K++ +WN ++ G L + +L+ F M+ + P+ VT+L L C
Sbjct: 248 ETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPAC 307
Query: 355 SHAGLVDEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
+H G +D R + ++ + GV+ + D+ + G IE A ++ M + +
Sbjct: 308 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLS 366
Query: 414 VWSGLLGGCRIHGNVE 429
W+ ++ G +HG +
Sbjct: 367 SWNAMIFGFAMHGRAD 382
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 247/438 (56%), Gaps = 12/438 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
+ A+S+F N+ S S+NTII + A+ FS+M + S + PD ++ +L
Sbjct: 429 MELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLS 488
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD--V 177
AC+ L + + +HS +L+ G C ++N+L+ Y + A+ + D+ + D V
Sbjct: 489 ACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNV 548
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+S L++GYVK GD AR++FD M RD ++W ++ GY Q+ Q +EA++LF +M+ +
Sbjct: 549 ISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILI 608
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIH----RYIELNQIRVDSFLSTGLVDFYAKCGY 293
+P++ L + LSACA L L+ GK IH R ++ + V S ++ YA+ G
Sbjct: 609 GPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSV----SNAIITVYARSGS 664
Query: 294 INTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
+ A +F+ K TW +M+V +A HGLG ++V F M+ +KPD +T +G L
Sbjct: 665 VPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLS 724
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C+HAG VD+ ++ +++M++ +G+ ++ HY CM DL RAGL+ EA E I++MP+ D
Sbjct: 725 ACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDT 784
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
VW LL CR+ N ++AE AA ++ + P + G Y LA+VY+ RW D +I +
Sbjct: 785 VVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLR 844
Query: 473 DAGKIKKNAGCSLIQLNG 490
+KK G S + G
Sbjct: 845 KDKGVKKETGFSWTHVRG 862
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 178/415 (42%), Gaps = 39/415 (9%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F +P S+ +I +AV F M + P ++ +L +C+ + +
Sbjct: 303 VFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEA 362
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ + +H V+KLG V V NS++++Y A+ +F+ + R V S N ++
Sbjct: 363 CGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSL 422
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPDNIA 245
Y G + A +F+ M R VSW T++AGY Q+ A++ F M+ ++PD
Sbjct: 423 YTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFT 482
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT--------- 296
+ S LSACA L L+ GK +H YI + S + L+ YAK G + T
Sbjct: 483 VTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAV 542
Query: 297 ------------------------AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
A EIF+ +++ W AM+VG +G ++ F
Sbjct: 543 VADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELF 602
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF-DEMESVYGVSKELKHYGCMADLLG 391
MI +P+ T+ L C+ +D +++ + S+ S + + + +
Sbjct: 603 RSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSN--AIITVYA 660
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPE 444
R+G + A + ++ + W+ ++ HG E A E +++ +KP+
Sbjct: 661 RSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPD 715
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 40/292 (13%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR----LRDAQELF 169
+ LL+ C + S + IH+ +K G + ++ N+L+ Y R+A+ LF
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 170 DEILY--RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
D+I Y R+ + N+L+ Y K+G L A +F MP RDAVSW ++ G +S + +A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI------------------ 269
++ F +M+ P L + LS+CA + G+ +H ++
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391
Query: 270 --------------ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
E Q+R S + +V Y G + A+ +FE+ E+++ +WN +
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNV-MVSLYTHQGRMELAVSMFENMVERSIVSWNTI 450
Query: 316 LVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSHAGLVDEARKL 366
+ G +GL ++L +FSRM+ A ++PD T+ L C++ ++ +++
Sbjct: 451 IAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQM 502
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 242/426 (56%), Gaps = 5/426 (1%)
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS- 128
N+ + F YN++IR + L SP A++ + M + + Y+FP L++AC+ L S S
Sbjct: 343 NLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSK 402
Query: 129 -LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+ +H+ V+ GF D FV+++L+ Y + + A+ LFD I RDVV +IDGY
Sbjct: 403 LIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGY 462
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
K GD+ HAR LF+ MP R+A+SW ++A Y++ +E + LF M + P+ LV
Sbjct: 463 GKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLV 522
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L+ACA LG L QG +H Y + + L+T LVD Y+KCG + +A+ F+ K
Sbjct: 523 SVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNK 582
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ WNAM+ G+AM+G SL F++MI +P T + L C+HA LV E KLF
Sbjct: 583 DAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLF 642
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG---GDVFVWSGLLGGCRI 424
++M S YGV + +HY C+ DL+ RAG++ EA + I++ G GD VW LG CR
Sbjct: 643 EQMSSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXLGACRT 702
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+GN+E+ + + + D G + + ++Y A + ++RR + +KK GCS
Sbjct: 703 YGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEXGMKKKPGCS 762
Query: 485 LIQLNG 490
+I+++G
Sbjct: 763 IIEVDG 768
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 65/143 (45%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ +A +F ++P + S++ ++ A++ + LF +M+ P+ +L A
Sbjct: 468 VEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTA 527
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + +HS + F + + +L+ +Y + A F I +D +
Sbjct: 528 CAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAW 587
Query: 181 NTLIDGYVKAGDLAHARQLFDRM 203
N +I G GD + +LF++M
Sbjct: 588 NAMISGVAMNGDAWKSLELFNKM 610
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 242/428 (56%), Gaps = 33/428 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ IP S+N +I + + A+ LF +M ++ PD + +L AC+Q
Sbjct: 188 AQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQ 247
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S L + +HS + GF ++ ++N+L
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNAL------------------------------- 276
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y+K G++ A LF+ + ++D +SW TL+ GY + +EA+ LF M+ P+
Sbjct: 277 IDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNE 336
Query: 244 IALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ ++S L ACA LG ++ G+ IH YI+ L + S L T L+D YAKCG I A ++F
Sbjct: 337 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVF 396
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+S ++L +WNAM+ G AMHG + FSRM + I+PD +T +G L CSH+G++D
Sbjct: 397 DSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLD 456
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI M M D +W LL
Sbjct: 457 LGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKA 516
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C++HGNVE+ E+ A++++K++P++ G Y +L+++YA A RW +V K R L+ +KK
Sbjct: 517 CKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVP 576
Query: 482 GCSLIQLN 489
GCS I+++
Sbjct: 577 GCSSIEID 584
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 237/428 (55%), Gaps = 12/428 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CKT++ + IHA + GL H L + F S SP D L+YA
Sbjct: 7 SLLHNCKTLQSLRIIHAKMIKTGL------HNTNYALSKLIEF----SVLSPHFDGLTYA 56
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+F++I P+ +NT+ R H L S P++A+ L+ M ++ + P+ Y+FPFLL+AC++
Sbjct: 57 ISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKS 116
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q IH VLKLG D++V SL+ +Y R DA+++FD+ +RDVVS LI
Sbjct: 117 KAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALI 176
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY G + A+++FD +P +D VSW L++GYA++ +EA++LF MM ++KPD
Sbjct: 177 KGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDES 236
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ LSACA+ +E G+ +H +I+ + + + L+D Y KCG + TA +FE
Sbjct: 237 TMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGL 296
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
K++ +WN ++ G L + +L+ F M+ + P+ VT+L L C+H G +D R
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGR 356
Query: 365 KLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ ++ + GVS + D+ + G IE A ++ M + + W+ ++ G
Sbjct: 357 WIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFA 415
Query: 424 IHGNVEIA 431
+HG A
Sbjct: 416 MHGRANPA 423
>gi|125526069|gb|EAY74183.1| hypothetical protein OsI_02067 [Oryza sativa Indica Group]
Length = 657
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 243/433 (56%), Gaps = 5/433 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
++ A +F IP S+ T+I + L A+ + M TV I + L++
Sbjct: 225 INMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVK 284
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
ACS+ + S Q +H+ +LK GF FV +L+H Y + +Q F V S
Sbjct: 285 ACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHSQMQFKLSDKSHVAS 344
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N L+ ++ + ARQLFD MP RD +SW TL++GY QS A+Q+FC+M+D +
Sbjct: 345 WNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGV 404
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ I L SALSA A G L Q + IH YI I++ LS GL++ YAKCG I A++
Sbjct: 405 EPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQ 464
Query: 300 IFESSQEKNLFT--WNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSH 356
+F ++K++ WN+++ LA+HG +SL FS++ IKP+ +T LG L C H
Sbjct: 465 LFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQSTTNIKPNSITYLGVLNACCH 524
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AG+V E ++ F+ M YG+ E+KHYGCM DLL RAG +EEA +IK MPM DV W
Sbjct: 525 AGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWG 584
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
+L R GNV + E AAE + KL P G L+++YA+A W +V +R+ L
Sbjct: 585 CILAAARTQGNVALGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRKELQNEN 644
Query: 477 IKKNAGCS-LIQL 488
+++ G S ++QL
Sbjct: 645 LERLTGSSGILQL 657
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 192/411 (46%), Gaps = 47/411 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + +P S+ T+I A + P A+ +F M T ++ P+ + +L A
Sbjct: 92 LERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAVFRDMLTEAVQPNEVTLAEVLTA 151
Query: 121 CSQLCSHSLAQTI---HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ C H + H ++ G V V +L+H Y ++ A+ +F+ + R+
Sbjct: 152 MA--CDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYGAVSQVPSARSIFELMPDRNT 209
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-D 236
V+ NT+++ YVKAG + A ++F +P RD VSW T++ GY +D +A++ + M+
Sbjct: 210 VTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGT 269
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN- 295
+ I+ + + LV + AC+R + +G+ +H I N +F+ L+ +Y C +I+
Sbjct: 270 VGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDH 329
Query: 296 ------------------------------TAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
A ++F+ E++ +W+ ++ G G
Sbjct: 330 SQMQFKLSDKSHVASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNS 389
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKEL----K 381
++L F M++A ++P+ +T+ AL +++G + +AR + D Y +S+ + K
Sbjct: 390 NMALQIFCSMLDAGVEPNEITLASALSAVANSGTLGQARWIHD-----YIISRSIQLTDK 444
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGG-DVFVWSGLLGGCRIHGNVEIA 431
+ ++ + G I EA+++ + V W+ ++ IHG V ++
Sbjct: 445 LSAGLINVYAKCGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMS 495
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 156/383 (40%), Gaps = 76/383 (19%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYC-VFHRLRDAQELFDEI--L 173
L++ + SH + +H+ K G + ++FV NSL+ Y V L A LFDEI L
Sbjct: 17 LKSAAARLSH--GEQLHALAAKSGLLTSNLFVRNSLLAFYSRVAPSL--AYHLFDEIPPL 72
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
RD + N L+ +AG L A+ L MP RDAVS+ T+++ ++S E A+ +F +
Sbjct: 73 LRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAVFRD 132
Query: 234 MMDLDIKPDNIALVSALSACA---------------------------------RLGELE 260
M+ ++P+ + L L+A A G +
Sbjct: 133 MLTEAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYGAVS 192
Query: 261 QGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLA 320
Q + EL R ++ +++ Y K G IN A E+F E++ +W M+ G
Sbjct: 193 QVPSARSIFELMPDR-NTVTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYM 251
Query: 321 MHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKL--------FDEME 371
+L + M+ I+ + V ++G + CS V E ++L FD
Sbjct: 252 CADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHA 311
Query: 372 SV-------YGVSKELKHY----------------GCMADLLGRAGLIEEALEMIKKMPM 408
V YG + H MA LL R L+ EA ++ MP
Sbjct: 312 FVQATLIHYYGSCDFIDHSQMQFKLSDKSHVASWNALMASLL-RRNLVHEARQLFDDMP- 369
Query: 409 GGDVFVWSGLLGGCRIHGNVEIA 431
D WS L+ G GN +A
Sbjct: 370 ERDTISWSTLISGYVQSGNSNMA 392
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 241/430 (56%), Gaps = 18/430 (4%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ P S+N +I + A+ ++ M + + PD + L+ +
Sbjct: 132 MENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSS 191
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + + V G + + N+LM ++ + +A+ +FD + R +VS
Sbjct: 192 CAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVS- 250
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+LFD M +D V W ++ G Q+ + ++A+ LF M +
Sbjct: 251 -----------------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTD 293
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I ++ LSAC++LG L+ G IHRYIE + + ++ L T LVD YAKCG I+ A+ +
Sbjct: 294 PDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCV 353
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F Q +N T+ A++ GLA+HG ++ YF+ MI+A I PD +T +G L C H G++
Sbjct: 354 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 413
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
R F +M+S + ++ +LKHY M DLLGRAGL+EEA ++++ MPM D VW LL
Sbjct: 414 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLF 473
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GCR+HGNV++ E AA+ +++L P D G+Y +L +Y A+ WED + RR ++ ++K
Sbjct: 474 GCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKI 533
Query: 481 AGCSLIQLNG 490
GCS I++NG
Sbjct: 534 PGCSSIEVNG 543
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 185/387 (47%), Gaps = 49/387 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM---RTVSIPPDFYSFPFL 117
L+Y + I I P+ FS+N IR + +P +AV+ + QM PD +++P L
Sbjct: 28 LNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVL 87
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ C+ L +SL I V KL V N+ +H++
Sbjct: 88 FKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMF--------------------- 126
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
SC G++ +AR++FD P RD VSW L+ GY + + E+AI+++ M
Sbjct: 127 ASC----------GEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESE 176
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+KPD++ ++ +S+CA LG+L +GK + Y++ N +R+ L+ L+D ++KCG I+ A
Sbjct: 177 GVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEA 236
Query: 298 IEIFES-------------SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
IF++ +EK++ WNAM+ G + +L F M + PD
Sbjct: 237 RRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDE 296
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
+T++ L CS G +D + +E + +S + + D+ + G I EAL +
Sbjct: 297 ITMIHCLSACSQLGALDVGIWIHRYIEK-HSLSLNVALGTSLVDMYAKCGNISEALCVFH 355
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + ++ ++GG +HG+ A
Sbjct: 356 GIQT-RNSLTYTAIIGGLALHGDASTA 381
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 242/416 (58%), Gaps = 4/416 (0%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS---LAQTIH 134
S+ T I + + A F QMR +I P+ +F LL AC+ S S IH
Sbjct: 58 SWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAIH 117
Query: 135 SQVLKLGF-ICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
+ V KLG I DV V +L+ +Y R+ A+ FD++ R++VS NT+IDGY++ G
Sbjct: 118 AHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKF 177
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A Q+FD +P ++A+SW L+ G+ + D EEA++ F M + PD + +++ ++AC
Sbjct: 178 EDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAAC 237
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A LG L G +HR + R + +S L+D Y++CG I+ A ++F+ ++ L +WN
Sbjct: 238 ANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWN 297
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+++VG A++GL +L YF+ M E KPDGV+ GAL+ CSHAGL+ E ++F+ M+ V
Sbjct: 298 SIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRV 357
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+ ++HYGC+ DL RAG +EEAL ++K MPM + + LL CR GN+ +AE
Sbjct: 358 RRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAEN 417
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
++++L Y +L+++YA +W+ K+RR + I+K G S I+++
Sbjct: 418 VMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEID 473
>gi|186478293|ref|NP_172391.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099767|sp|O80488.1|PPR23_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09190
gi|3249103|gb|AAC24086.1| Contains similarity to membrane-associated salt-inducible protein
homolog TM021B04.10 gb|2191192 from A. thaliana BAC
gb|AF007271 [Arabidopsis thaliana]
gi|28393182|gb|AAO42022.1| unknown protein [Arabidopsis thaliana]
gi|332190289|gb|AEE28410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 484
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/478 (33%), Positives = 264/478 (55%), Gaps = 17/478 (3%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
T ++ +IHAH L FL ++L +I S +D YA +F++I
Sbjct: 16 TRTRLPEIHAHLLRH---FLHGSNLLLAHFISIC-------GSLSNSD---YANRVFSHI 62
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P+ +N +I+ ++L PL ++ FS M++ I D Y++ LL++CS L +
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+H ++++ GF + ++ +Y R+ DAQ++FDE+ R+VV N +I G+ +G
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
D+ LF +M R VSW ++++ ++ + EA++LFC M+D PD +V+ L
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFESSQEKNL 309
A LG L+ GK IH E + + D F++ G LVDFY K G + A IF Q +N+
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGLFKD-FITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+WN ++ G A++G G + F MIE ++ P+ T LG L CS+ G V+ +LF
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M + + +HYG M DL+ R+G I EA + +K MP+ + +W LL CR HG+V
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
++AE AA ++K++P + G Y +L+++YA RW+DV K+R + +++K+ G S I
Sbjct: 422 KLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 263/487 (54%), Gaps = 12/487 (2%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ + +CK ++++ +IHA + GL + I F ++ A
Sbjct: 18 HHLLAQCKKLRELQRIHALAIAHGL-HPHQQSVSCKIFRCYADFGRVADARK-------- 68
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+F+ IP P S+ +++ H + A+ LF+++ PD ++ L A S
Sbjct: 69 ---LFDEIPNPDLISFTSLMSLHLQLDNQREAISLFARVVAAGHRPDGFAVVGALSASSG 125
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + +H + +LG +V V N+L+ +Y + A ++FD + +D V+ ++
Sbjct: 126 AGDQVVGRAVHGLIFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSM 185
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY+K + A FD++P R V+W L+ G+ Q Q A++LF M+ +P +
Sbjct: 186 LHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTH 245
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +V LSACA +G L+ G+ IH Y ++ +S L+D YAK G+I A +F+
Sbjct: 246 VTIVGVLSACADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQE 305
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
Q K+ FTW M+ + G G+ +L F M+ A + P+ VT + L CSH+GL++E
Sbjct: 306 VQSKDSFTWTTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEG 365
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+LFD M +Y + L+HYGCM DLLGR GL+EEA +I M + D+ +W LL C
Sbjct: 366 IELFDRMRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACL 425
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+ GN +AE A + ++K +P D GVY +L ++YA++++W + ++R+ + + KI K GC
Sbjct: 426 VRGNNRLAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKPGC 485
Query: 484 SLIQLNG 490
S I+++G
Sbjct: 486 SWIEIDG 492
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 241/440 (54%), Gaps = 62/440 (14%)
Query: 107 IPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
+ P+ Y+FP L++ C ++ S + IH+++LK GF D+FV NSL+H+Y V R+ DA+
Sbjct: 6 VAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 65
Query: 167 -------------------------------ELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
ELF+E+ RD+ S N++I GYV GD+
Sbjct: 66 AMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTA 125
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF----------CNMM--------DL 237
A LF++MPFRD VSW ++ GYAQ E A +LF N+M D
Sbjct: 126 AEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDY 185
Query: 238 D------------IKPDNIALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGL 284
D P+ LVS L+ACA LG L++GK IH YI+ N+ I D LST L
Sbjct: 186 DECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTAL 245
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
+ YAKCG ++ A ++F+ +++ +WN+M++G MHG +L F M + P+
Sbjct: 246 LTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPND 305
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
T + L C+H+G++ E FD M Y + +++HYGCM DLLGRAGL+++ E+I+
Sbjct: 306 ATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIR 365
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
KMPM G +W LL CR H N E+AE A+ +++L+P D G Y +L+++YA +W+D
Sbjct: 366 KMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDD 425
Query: 465 VVKIRRSLDAGKIKKNAGCS 484
V +R+ + + K G S
Sbjct: 426 VEIVRKMMKERGLTKTTGLS 445
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 141/335 (42%), Gaps = 20/335 (5%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR- 119
++ A +FN +P+ S+N +I + + A LF+ M ++ +R
Sbjct: 123 MTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRI 182
Query: 120 ----ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
C ++ + +T+ ++ + + L L + +++ + ++
Sbjct: 183 KDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKN-----NRVIEP 237
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
DV+ L+ Y K G + AR +FD+M R VSW +++ GY Q ++A+++F +M
Sbjct: 238 DVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDME 297
Query: 236 DLDIKPDNIALVSALSACARLGELEQGK---NIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
P++ + LSACA G + +G ++ R + +V+ + +VD + G
Sbjct: 298 KRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHY--GCMVDLLGRAG 355
Query: 293 YINTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
+ E+ E W A+L H L+ + R+IE + G +L +
Sbjct: 356 LMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSN 415
Query: 352 VGCSHAGL--VDEARKLFDE--MESVYGVSKELKH 382
+ + V+ RK+ E + G+S L+
Sbjct: 416 IYAAEGKWDDVEIVRKMMKERGLTKTTGLSSSLRR 450
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 265/502 (52%), Gaps = 61/502 (12%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSASSPTT 58
TL N C T+ + QIHA G L LS I F +S
Sbjct: 14 TLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSG---------KIIMFCAVSQN----- 59
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAH-TLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
++YAL++F+ IP P +F +NT+IR + NA+ F +M+ ++ PD ++F F+
Sbjct: 60 --MNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQ-LAHRPDNFTFSFI 116
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ ++L +L + +H + K GF +V NSL+H+Y
Sbjct: 117 LKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMY--------------------- 155
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD- 236
G +K ++AH QLF+ M + VSW +++ + + EAI LF M+
Sbjct: 156 --------GMLKDIEIAH--QLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQ 205
Query: 237 ----LDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAK 290
++++PD+ LV LSAC +G L+ G+ +H ++ +N + LVD YAK
Sbjct: 206 QHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAK 265
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI-KPDGVTILG 349
CG + A E F + + KN+ +WN M++G A HG G +L F+RM+ + +PD +T L
Sbjct: 266 CGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLC 325
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L CSH GLVDE R+ F+ M Y + +KHYGCM DLLGRAGL EA E+IK MP+
Sbjct: 326 VLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVE 385
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
+ +W LL CR +GNVE+ E +H+M+L+P+ Y +LA++YA+ +W ++ K R
Sbjct: 386 CNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKER 445
Query: 470 RSLDAGKIKK-NAGCSLIQLNG 490
RS+ +++K G S I + G
Sbjct: 446 RSMQERRVRKPEPGNSFIGIPG 467
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 249/432 (57%), Gaps = 2/432 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLR 119
L A +F+ + S+ T++ + P A +F +M P+ +
Sbjct: 182 LPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAAS 241
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
A Q+ L + +H V++ G V + N+L+ ++ + A+E+FD + +DV S
Sbjct: 242 AAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYS 301
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+++ Y K GDL +A +LF +P R+AVSW +VA Y+Q++ EEA+++F +M+ +
Sbjct: 302 WTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGV 361
Query: 240 KPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+P + LVS LSACA+LG L+ G+ ++ YI +++ + LS +D +AKCG + A
Sbjct: 362 EPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAAS 421
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F + ++KN+ +WN M+V A+HG +L F + I PD +T +G L CSH+G
Sbjct: 422 RLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSG 481
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV E R F EM+ VYG+ +HY CM DLLG+ GL+EEA E+ + MP+G D W L
Sbjct: 482 LVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGAL 541
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR+HGNVEI + AA+ ++ L P D G+Y +++ +YA+ +W V IR + +K
Sbjct: 542 LNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVK 601
Query: 479 KNAGCSLIQLNG 490
KN GCS I+++G
Sbjct: 602 KNPGCSSIEVDG 613
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 183/409 (44%), Gaps = 68/409 (16%)
Query: 58 TDP--LSYALSIFNNIPY-PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
+DP L++A ++ P+ + T++R P +A+ LF ++ +P D +
Sbjct: 76 SDPPRLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTI 135
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEIL 173
F ++A + S S A+ IH K GFI V V N+L+H+Y L DA++LFDE+
Sbjct: 136 VFAVKAATT--SSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMA 193
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
RDVVS TL+DGY + G A ++F RM +VAG
Sbjct: 194 DRDVVSWTTLVDGYARGGLPDEAWRVFCRM----------VVAGGGW------------- 230
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
P+ + LV+A SA ++G L G+ +H+ + + +R+ L LVD + KCG
Sbjct: 231 -------PNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGC 283
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHG----LGRL---------------------- 327
+ +A EIF+ K++++W +M+ A G G+L
Sbjct: 284 VASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQA 343
Query: 328 -----SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
++ F+ MI A ++P T++ L C+ G +D R L+D + V +
Sbjct: 344 NLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNL 403
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
D+ + G + A + + M +V W+ ++ +HG E A
Sbjct: 404 SNAFIDMFAKCGDVGAASRLFRNME-DKNVVSWNTMIVAHALHGQSEEA 451
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 233/429 (54%), Gaps = 8/429 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ IP S+NT+I + A LF + S D +++ ++ A
Sbjct: 204 LGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE----SPVRDVFTWTAMVYA 259
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
Q A+ + ++ + + N ++ Y + R+ +ELF+E+ + ++ S
Sbjct: 260 YVQDGMLDEARRVFDEMPQKREMS----YNVMIAGYAQYKRMDMGRELFEEMPFPNIGSW 315
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GY + GDLA AR LFD MP RD+VSW ++AGYAQ+ EEA+ + M
Sbjct: 316 NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGES 375
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ ALSACA + LE GK +H + + LV Y KCG I+ A ++
Sbjct: 376 LNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDV 435
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ Q K++ +WN ML G A HG GR +L F MI A +KPD +T++G L CSH GL
Sbjct: 436 FQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLT 495
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D + F M YG++ KHY CM DLLGRAG +EEA +I+ MP D W LLG
Sbjct: 496 DRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLG 555
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
RIHGN+E+ E AAE V K++P + G+Y +L+++YA + RW DV K+R + ++K
Sbjct: 556 ASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKT 615
Query: 481 AGCSLIQLN 489
G S +++
Sbjct: 616 PGYSWVEVQ 624
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+F N ++ Y RLRDA+ LFD + +DVVS N ++ GYV++G + AR +FDRMP
Sbjct: 94 DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLF----------CN-----------------MMDL 237
++++SW L+A Y +S + EEA +LF CN + D
Sbjct: 154 HKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQ 213
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
D I+ + +S A+ G+L Q + R E + +R D F T +V Y + G ++ A
Sbjct: 214 IPVRDLISWNTMISGYAQDGDLSQAR---RLFEESPVR-DVFTWTAMVYAYVQDGMLDEA 269
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+ +K ++N M+ G A + + F M I + I G C +
Sbjct: 270 RRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGY---CQNG 326
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
L +AR LFD M VS + + + GL EEA+ M+ +M G+ S
Sbjct: 327 DLA-QARNLFDMMPQRDSVS-----WAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRST 380
Query: 418 L---LGGCRIHGNVEIAEAAAEHVMKLKPEDG 446
L C +E+ + V++ E G
Sbjct: 381 FCCALSACADIAALELGKQVHGQVVRTGYEKG 412
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 20/311 (6%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
S A +F+ +P+ FS+N ++ + +A +LF M D S+ +L
Sbjct: 80 FSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPE----KDVVSWNAMLSG 135
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ A+ + ++ I N L+ Y RL +A+ LF+ +++SC
Sbjct: 136 YVRSGHVDEARDVFDRMPHKNSIS----WNGLLAAYVRSGRLEEARRLFESKSDWELISC 191
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N L+ GYVK L ARQLFD++P RD +SW T+++GYAQ +A +LF D+
Sbjct: 192 NCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDV- 250
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ + A + G L++ + + + E+ Q R S+ ++ YA+ ++ E+
Sbjct: 251 ---FTWTAMVYAYVQDGMLDEARRV--FDEMPQKREMSY--NVMIAGYAQYKRMDMGREL 303
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE N+ +WN M+ G +G L + + + D V+ + G + GL
Sbjct: 304 FEEMPFPNIGSWNIMISGYCQNG----DLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLY 359
Query: 361 DEARKLFDEME 371
+EA + EM+
Sbjct: 360 EEAMNMLVEMK 370
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 23/320 (7%)
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
N+++ Y + A++LFD++ ++D+ S N ++ GY + L AR LFD MP +D V
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW +++GY +S +EA +F M ++I+ L+A R G LE+ + +
Sbjct: 128 SWNAMLSGYVRSGHVDEARDVFDRM----PHKNSISWNGLLAAYVRSGRLEEARRLFE-- 181
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
++ + L+ Y K + A ++F+ ++L +WN M+ G A G L
Sbjct: 182 --SKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDG----DL 235
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
R+ E D T + G++DEAR++FDEM +S Y M
Sbjct: 236 SQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMS-----YNVMIAG 290
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV- 448
+ ++ E+ ++MP ++ W+ ++ G +G++ A A ++ + P+ V
Sbjct: 291 YAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQNGDL----AQARNLFDMMPQRDSVS 345
Query: 449 YKVLADVYANADRWEDVVKI 468
+ + YA +E+ + +
Sbjct: 346 WAAIIAGYAQNGLYEEAMNM 365
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V C I +++ G A +FD MP R++VS+ +++GY ++ + A LF M
Sbjct: 33 TVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPH 92
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
D+ N+ L+ AR L + + + + + V S+ ++ Y + G+++
Sbjct: 93 KDLFSWNL----MLTGYARNRRLRDARML--FDSMPEKDVVSW--NAMLSGYVRSGHVDE 144
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A ++F+ KN +WN +L G L R+ E++ + ++ + G
Sbjct: 145 ARDVFDRMPHKNSISWNGLLAAYVRSG----RLEEARRLFESKSDWELISCNCLMGGYVK 200
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
++ +AR+LFD++ ++L + M + G + +A + ++ P+ DVF W+
Sbjct: 201 RNMLGDARQLFDQIP-----VRDLISWNTMISGYAQDGDLSQARRLFEESPV-RDVFTWT 254
Query: 417 GLL 419
++
Sbjct: 255 AMV 257
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 265/490 (54%), Gaps = 13/490 (2%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
+L ++ C + + QIHA LT+GLLF+ A + +P
Sbjct: 5 SLKLLLQSCADLVTLKQIHAQALTQGLLFIEQP-------LACKLVNRYAKLGNPRD--- 54
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A +F I P +Y ++I + P+ A +FS++ + PD +S L AC
Sbjct: 55 --AQKVFGYIQDPDRVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSAC 112
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + +H + + + V N+L+ +YC ++ AQ +F ++ +DV S
Sbjct: 113 GKKQDLLNGKLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWT 172
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIK 240
+L++G+V L AR++FD MP+R+ V+W ++ GY + +++F M + + +
Sbjct: 173 SLLNGFVMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQ 232
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P I V+ LS CA LG + G+ +H YI + +S L+D Y+K G + +A++I
Sbjct: 233 PTVITAVAVLSGCADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKI 292
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +K++F+W M+ + HG G +L F M+E+ + P+ VT L L GCSH+GL+
Sbjct: 293 FDRLVKKDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLL 352
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
EA KLF+ M YG +++HYGCM DLL RAGL+EEA E+I MPM D +W LL
Sbjct: 353 VEANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLS 412
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C N+ +AE A + +++L+P D GVY +L+++Y A+R +D K+R+ + K+ K
Sbjct: 413 ACMNQRNLGLAEIAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKK 472
Query: 481 AGCSLIQLNG 490
CS I+LNG
Sbjct: 473 PACSYIELNG 482
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 280/491 (57%), Gaps = 25/491 (5%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ CK + Q+HA LTK L F+ LT +L + IS ++ ++YA
Sbjct: 30 SLLEICKFTTEFAQLHAR-LTK-LGFIKNPLALTRLL----CYSSISQYAN-----INYA 78
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF-SQMRTVSIPPDFYSFPFLLRACSQ 123
SIFN P+TF+YN +IR + P NA+ LF S + + + +FPF+L+ACSQ
Sbjct: 79 QSIFNFDKNPNTFAYNVMIRGYAQREKPENALSLFYSMLCNANSGQNKLTFPFVLKACSQ 138
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + +H V K G D+FV NSL+ +Y + A ++F++I DVVS N++
Sbjct: 139 VRAIEEGKQVHGLVFKHGLSEDLFVQNSLISMYSSCGLIGFACQVFNKIDDPDVVSWNSM 198
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G V G + +Q+FDRM R V+W L+ GY ++ EA +LF M
Sbjct: 199 ISGLVDLGFVEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELFDQM--------R 250
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+VS L+AC+ LG LEQG+ + +IE N I V+S L T LV+ +AKCG I A+ +F+S
Sbjct: 251 FTMVSVLTACSYLGALEQGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALSVFKS 310
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+E+++ WN+++ LA HG G+ + FS M+ + DG+ LG L C H GLVDE
Sbjct: 311 IEERDVGAWNSIIHKLAAHGHGQEAFAIFSDMLRSNTLLDGIIFLGLLSVCRHLGLVDEG 370
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK---MPMGGDVFVWSGLLG 420
++ F M YG+ +++HYGCM DLL A L+EEA ++I M V +W LLG
Sbjct: 371 KRFFQLMSEEYGLVPKVEHYGCMVDLLCHADLLEEARDLIDSSHASQMKSSVPMWGALLG 430
Query: 421 -GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C++ N+ + E AA+H+++L P DG Y VL+++Y+ A +E +++R + ++K
Sbjct: 431 VSCQLK-NIVMGEYAAKHLLQLDPFDGNCYTVLSNLYSAAGLYEKAIEVRNEMKKQGLEK 489
Query: 480 NAGCSLIQLNG 490
G S ++++G
Sbjct: 490 IPGSSSMEIDG 500
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 242/397 (60%), Gaps = 1/397 (0%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ + + M I PD S + +CSQL + ++ H VL+ GF + N+L+
Sbjct: 320 ALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 379
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+Y HR A +FD + + VV+ N+++ GY++ G++ A + F+ MP ++ VSW T+
Sbjct: 380 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTI 439
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
++ Q + EEAI++F M + + D + ++S SAC LG L+ K I+ YIE N+
Sbjct: 440 ISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR 499
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
I++D L T LVD +++CG +A+ IF S +++ W A + +AM G ++ F+
Sbjct: 500 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFN 559
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
MIE +KPDGV +GAL C H GLV + +++F+ ME ++GVS E HYGCM DLLGRA
Sbjct: 560 EMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRA 619
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
GL+EEAL++IK MP + +W+ LL CR+ GNVE+A AAE + L PE G Y +L+
Sbjct: 620 GLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLS 679
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+VYA+A RW D+ K+R S+ ++K G S+IQ+ G
Sbjct: 680 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRG 716
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 43/352 (12%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K CKTI ++ H +GL + AIT S T + LS+A
Sbjct: 38 LKNCKTIDELKMFHLSLTKQGL---------DDDVSAITKLVA-RSCELGTRESLSFAKE 87
Query: 67 IFNN-IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F N Y + F YN++IR + A++LF +M I PD Y+FPF L C++
Sbjct: 88 VFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSR 147
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
IH ++K+ + D+FV NSL+H Y L A+++FDE+ R+VVS ++I
Sbjct: 148 DKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMI- 206
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNI 244
GYA+ + ++A+ LF M+ D D+ P+++
Sbjct: 207 ------------------------------CGYARREFAKDAVDLFFRMVRDEDVIPNSV 236
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V +SACA+L +LE G+ ++ +I + I V+ + + LVD Y KC I+ A +F+
Sbjct: 237 TMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEY 296
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
NL NAM GL + +L + M+++ I+PD +++L A+ CS
Sbjct: 297 GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQ 348
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 185/424 (43%), Gaps = 69/424 (16%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
L A +F+ + + S+ ++I + +AV LF +M R + P+ + ++
Sbjct: 184 LDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVIS 243
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC++L + ++ + G + ++++L+ +Y + + A+ LFDE ++
Sbjct: 244 ACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDL 303
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
CN + YV+ G +EA+ + MMD I
Sbjct: 304 CNAMASNYVRQG-------------------------------LTKEALGVLNLMMDSGI 332
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+PD I+++SA+S+C++L + GK+ H Y+ N + L+D Y KC +TA
Sbjct: 333 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 392
Query: 300 IFESSQEKNLFTWNAMLVGLAMHG-----------LGRLSLVYFSRMIEARIKP------ 342
IF+ K + TWN+++ G +G + ++V ++ +I A ++
Sbjct: 393 IFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEA 452
Query: 343 ---------------DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
DGVT++ C H G +D A+ ++ +E + +++ +
Sbjct: 453 IEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEK-NRIQLDVRLGTTLV 511
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA-EAAAEHVMK-LKPED 445
D+ R G E A+ + + DV W+ +G + GNVE A E E + + LKP D
Sbjct: 512 DMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKP-D 569
Query: 446 GGVY 449
G V+
Sbjct: 570 GVVF 573
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Query: 200 FDRMPFRDAVSWGT------LVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
F + F + S+GT L+ GYA S C+EAI LF MM+ I PD LS C
Sbjct: 84 FAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVC 143
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A+ + G IH I D F+ LV FYA+CG ++ A ++F+ E+N+ +W
Sbjct: 144 AKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWT 203
Query: 314 AMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+M+ G A + ++ F RM+ + + P+ VT++ + C+ ++ K++D
Sbjct: 204 SMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD 259
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 34/263 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACS 122
A FN +P + S+NTII A + A+ +F M++ + D + + AC
Sbjct: 421 AWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACG 480
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + LA+ I+ + K +R++ DV T
Sbjct: 481 HLGALDLAKWIYYYIEK--------------------NRIQ-----------LDVRLGTT 509
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D + + GD A +F+ + RD +W + A + E AI+LF M++ +KPD
Sbjct: 510 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPD 569
Query: 243 NIALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + AL+AC G ++QGK I +E L+ + + +VD + G + A+++
Sbjct: 570 GVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLI 629
Query: 302 ES-SQEKNLFTWNAMLVGLAMHG 323
+ E N WN++L + G
Sbjct: 630 KDMPTEPNDVIWNSLLAACRVQG 652
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 247/428 (57%), Gaps = 2/428 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P + +N ++R + AV L QM + PD + + ACS+
Sbjct: 103 ARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSR 162
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
SL + IH + + F ++ V N+L+ +Y L +A +LF+++ R+++S L
Sbjct: 163 ARDLSLGRRIHVYMDNV-FGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTIL 221
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY AG L AR LF++ +D + W ++ Q EEA+ LF +M ++PD
Sbjct: 222 VSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDR 281
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+V+ L+ CA LG L+QG+ IH+Y E ++++D+ L T L+D Y+KCG+I ++E+F
Sbjct: 282 FTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWR 341
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
Q ++ W A++ GLA +G +L F M +++KPDGVT +G L C H GLVDE
Sbjct: 342 MQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEG 401
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF-VWSGLLGGC 422
RK F M VY + ++HY C+ +LLGRAGL++EA +I +P+ D ++ LL C
Sbjct: 402 RKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTAC 461
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+ HGNVE++E + + + + V ++++VYA A RWEDV+++R + +KK AG
Sbjct: 462 KAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAG 521
Query: 483 CSLIQLNG 490
CSLI++ G
Sbjct: 522 CSLIEVKG 529
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 177/409 (43%), Gaps = 83/409 (20%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
N +IR S + ++ +R + D +++PF+LRA L + H+ +K
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIK 77
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
GF D + +SLM +Y + R+ A+++FDE+ R +V N ++ Y++ G +
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYS----- 132
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
A A S+Q E + + PD + LV+A++AC+R +L
Sbjct: 133 ----------------AAVALSEQMERS----------GVTPDRVTLVTAVTACSRARDL 166
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE----------------- 302
G+ IH Y++ N + ++ L+D Y K + A+++FE
Sbjct: 167 SLGRRIHVYMD-NVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGY 225
Query: 303 --------------SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+EK+L W AM+ HG +L F M R++PD T++
Sbjct: 226 GLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVV 285
Query: 349 GALVGCSHAGLVD---------EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
L C++ G +D E RK+ ++++V G + + D+ + G IE++
Sbjct: 286 TLLTCCANLGALDQGEWIHQYAEQRKM--KIDAVLGTA--------LIDMYSKCGHIEKS 335
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
LE+ +M G D W+ ++ G +G A + + + K + GV
Sbjct: 336 LEVFWRM-QGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGV 383
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 36/240 (15%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +FN + +I A A+ LF M+ + PD ++ LL
Sbjct: 231 LDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTC 290
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + IH + M + D V
Sbjct: 291 CANLGALDQGEWIHQ-----------YAEQRKMKI--------------------DAVLG 319
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
LID Y K G + + ++F RM RDA +W ++ G A + Q A++LF +M +K
Sbjct: 320 TALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVK 379
Query: 241 PDNIALVSALSACARLGELEQG-KNIHRYIELNQI--RVDSFLSTGLVDFYAKCGYINTA 297
PD + + LSAC G +++G K H E+ QI RV+ + + LV+ + G ++ A
Sbjct: 380 PDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHY--SCLVNLLGRAGLLDEA 437
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 254/441 (57%), Gaps = 20/441 (4%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
SY L +F S F+ N ++R + PL + LF ++ + +SF FLL +
Sbjct: 80 SYPLLLFRCSNCTSAFASNHLLR---VLPHPL-PLRLFPRLPRR----NPHSFTFLLASL 131
Query: 122 SQ-----------LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
S + S + +H+ +K G D++V N+ +H Y V + +++FD
Sbjct: 132 SNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFD 191
Query: 171 EI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
E+ + RDVV+ N ++ GYV+AG + AR++FD MP RD VSW T++ GY + + E A+
Sbjct: 192 ELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALG 251
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+F NM+ +K + A+V+ALSA A+LG LEQGK +H ++ + + L L+D Y+
Sbjct: 252 VFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYS 311
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG + A E+F++ +++F WN+M+ GLA HGLG ++ F + + P +T +G
Sbjct: 312 KCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVG 371
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L CS GLVDE R+ F M Y + E++HYGCM DLL RAGL++EA+E+I+ M +
Sbjct: 372 VLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIP 431
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
D +W +L C+ HG V++ +++L P G Y +LA +YA A +W++V K+R
Sbjct: 432 PDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVR 491
Query: 470 RSLDAGKIKKNAGCSLIQLNG 490
+ + K+AG SL++ +G
Sbjct: 492 KLMSNRGTSKSAGWSLMEAHG 512
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 245/431 (56%), Gaps = 33/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A +F+ IP S+N +I + + A+ LF +M ++ PD + ++ A
Sbjct: 170 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 229
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+Q S L + +HS + GF ++ ++N+L
Sbjct: 230 CAQSASIELGRQVHSWIDDHGFGSNLKIVNAL---------------------------- 261
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
ID Y+K G++ A LF+ + ++D +SW TL+ GY + +EA+ LF M+
Sbjct: 262 ---IDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 318
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYI--ELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
P+++ ++S L ACA LG +E G+ IH YI L + S T L+D YAKCG I A
Sbjct: 319 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 378
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F+S ++L +WNAM+ G AMHG + FSRM + I+PD +T +G L CSH+G
Sbjct: 379 QVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSG 438
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
++D R +F M+ Y ++ +L+HYGCM DLLG +GL +EA EMI M M D +W L
Sbjct: 439 MLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSL 498
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C++HGNVE+ E+ A++++K++P++ G Y +L+++YA A RW +V KIR L+ +K
Sbjct: 499 LKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMK 558
Query: 479 KNAGCSLIQLN 489
K GCS I+++
Sbjct: 559 KVPGCSSIEID 569
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 219/378 (57%), Gaps = 2/378 (0%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
SP D L YA+S+F I P+ +NT+ R H L S P++A+ L+ M ++ + P+ Y+F
Sbjct: 32 SPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTF 91
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
PFLL++C++ + Q IH VLKLG+ D++V SL+ +Y RL DA+++FD+ +
Sbjct: 92 PFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSH 151
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS LI GY G +A A+++FD +P +D VSW +++GYA++ +EA++LF M
Sbjct: 152 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 211
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
M +++PD +VS +SACA+ +E G+ +H +I+ + + + L+D Y KCG +
Sbjct: 212 MKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV 271
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
TA +FE K++ +WN ++ G L + +L+ F M+ + P+ VT+L L C
Sbjct: 272 ETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPAC 331
Query: 355 SHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
+H G ++ R + + + + GV+ H + D+ + G IE A ++ + + +
Sbjct: 332 AHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLS 390
Query: 414 VWSGLLGGCRIHGNVEIA 431
W+ ++ G +HG A
Sbjct: 391 SWNAMIFGFAMHGRANAA 408
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 271/497 (54%), Gaps = 32/497 (6%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ + + Q+ Q+ +H T G S H YA FK I S ++ L YA
Sbjct: 13 LTKINHLNQLKQLQSHLTTLGH---SQTH-----FYA---FKLIRFCSLNLSN-LHYAHQ 60
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVV-LFSQMRTVSIPPDFYSFPFLLRACSQLC 125
IFN+I P+ + + II A FSS + LF M +I P+ + +P +L++ +
Sbjct: 61 IFNHIHSPNIYLFTAIITA---FSSQQHTTFKLFKTMLNSNIRPNNFIYPHVLKSVKE-- 115
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC-VFHRLRDAQELFDEILYRDVVSCNTLI 184
L +H+Q++K GF+ V SL+ Y V LRDA ++FDE+ R++V L+
Sbjct: 116 -RFLVDLVHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLV 174
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL------- 237
GY++ GD+ +FD M RD +W +++G Q+ E I+LF M+
Sbjct: 175 SGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGG 234
Query: 238 ---DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
KP+ + +V LSAC G L+ GK IH Y+ + VDSF+S LVD Y KCG +
Sbjct: 235 FCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSL 294
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTILGALV 352
A ++FE Q K L +WN+M+ A+HG ++ +F +M+E ++PD VT +G L
Sbjct: 295 ELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLN 354
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C+H GLV++ F+ M YG+ ++ HYGC+ DLLGRAG +EA++++K M M D
Sbjct: 355 ACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDE 414
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
VW LL GC++HG ++AE AA+ ++++ P +GG +LA++Y +W+++ + L
Sbjct: 415 VVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKL 474
Query: 473 DAGKIKKNAGCSLIQLN 489
K K GCS I+++
Sbjct: 475 KQQKSYKIPGCSWIEVD 491
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 254/441 (57%), Gaps = 20/441 (4%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
SY L +F S F+ N ++R + PL + LF ++ + +SF FLL +
Sbjct: 80 SYPLLLFRCSNCTSAFASNHLLR---VLPHPL-PLRLFPRLPRR----NPHSFTFLLASL 131
Query: 122 SQ-----------LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
S + S + +H+ +K G D++V N+ +H Y V + +++FD
Sbjct: 132 SNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFD 191
Query: 171 EI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
E+ + RDVV+ N ++ GYV+AG + AR++FD MP RD VSW T++ GY + + E A+
Sbjct: 192 ELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALG 251
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+F NM+ +K + A+V+ALSA A+LG LEQGK +H ++ + + L L+D Y+
Sbjct: 252 VFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYS 311
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG + A E+F++ +++F WN+M+ GLA HGLG ++ F + + P +T +G
Sbjct: 312 KCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVG 371
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L CS GLVDE R+ F M Y + E++HYGCM DLL RAGL++EA+E+I+ M +
Sbjct: 372 VLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIP 431
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
D +W +L C+ HG V++ +++L P G Y +LA +YA A +W++V K+R
Sbjct: 432 PDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVR 491
Query: 470 RSLDAGKIKKNAGCSLIQLNG 490
+ + K+AG SL++ +G
Sbjct: 492 KLMSNRGTSKSAGWSLMEAHG 512
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 159/438 (36%), Positives = 244/438 (55%), Gaps = 38/438 (8%)
Query: 53 ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFY 112
A++P + LSYA +F+ IP P T +YNTIIR+H+ F P +++ F MR+ IP D +
Sbjct: 32 AAAP--ESLSYARYVFSRIPSPDTIAYNTIIRSHSRFF-PSHSLSYFFSMRSNGIPLDNF 88
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
+FPF+L+ACS+L + +HS ++K G D+FV N+L+ VY
Sbjct: 89 TFPFVLKACSRL---QINLHLHSLIVKYGLGSDIFVQNALICVY---------------- 129
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
GY G L A ++FD M RD+VSW T++A + + EA+ LF
Sbjct: 130 -------------GY--CGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFE 174
Query: 233 NM-MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M ++ + PD + ++S +SA + LG+LE G+ + +I V L T L+D +++C
Sbjct: 175 KMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRC 234
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G I+ +I +FE +N+ TW A++ GL +HG +L F M ++ ++PD VT G L
Sbjct: 235 GSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVL 294
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
V CSH GLV E +F+ + VYG+ L HYGCM D+LGRAGL+ EA + +++MPM +
Sbjct: 295 VACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPN 354
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
+W LLG C H N+ +AE + K+ G +L++VY A RW + IR
Sbjct: 355 SIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSK 414
Query: 472 LDAGKIKKNAGCSLIQLN 489
+ +I K GCS I ++
Sbjct: 415 MREKRIGKEPGCSSINVD 432
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 11/255 (4%)
Query: 176 DVVSCNTLIDGYVKAG--DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
D +S TL+ V A L++AR +F R+P D +++ T++ +++ ++ F +
Sbjct: 19 DPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHSRFFP-SHSLSYFFS 77
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M I DN L AC+R L+ ++H I + D F+ L+ Y CG
Sbjct: 78 MRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLGSDIFVQNALICVYGYCGS 134
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALV 352
+ A+++F+ E++ +W+ ++ +G +L F +M +E ++ PD VT+L +
Sbjct: 135 LEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVIS 194
Query: 353 GCSHAGLVDEARKLFDEMESV-YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
SH G ++ R + + + +GVS L + D+ R G I+E++ + +KM + +
Sbjct: 195 AISHLGDLELGRWVRAFIGRLGFGVSVALG--TALIDMFSRCGSIDESIVVFEKMAV-RN 251
Query: 412 VFVWSGLLGGCRIHG 426
V W+ L+ G IHG
Sbjct: 252 VLTWTALINGLGIHG 266
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 258/434 (59%), Gaps = 12/434 (2%)
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM----RTVSIPPDFYSFPFLL 118
YALS+F + P F ++R L PL+ LFS++ R +P ++F L
Sbjct: 93 YALSVFAALSPPDPFLAAALLRFALLTQPPLSPFHLFSRILRTARGGELPFLPFAFSPLA 152
Query: 119 RACSQLCSHSLAQTIHS-QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
++ + S AQ H+ L GF FV NSL+ Y + A+++FDE++ +DV
Sbjct: 153 KSAAAARSLPAAQAAHAVSFLVGGFDKHRFVENSLIGAYIACGDVGAARKVFDEMVVKDV 212
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+ +++ Y ++ D+ A ++F + P +D V+W +V GYAQ+ +A+++F M L
Sbjct: 213 ICWTSIVVAYSRSRDMGSAEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRMTAL 272
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
I D ++L A+SACA+LG +++ + E+N ++ + +GLVD YAKCG I+ A
Sbjct: 273 GIGIDEVSLTGAISACAQLGAVKRAAWVQEIAEMNGFGMNVVVGSGLVDMYAKCGLIDEA 332
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSH 356
++F+ QEKN++T+++M+VGLA HG R ++ F M+ A + P+ VT +G L CSH
Sbjct: 333 CKVFDGMQEKNVYTYSSMVVGLASHGRAREAIALFKDMVRRADVAPNHVTFIGVLTACSH 392
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM---PMGGDVF 413
AG+V + R F +M+ YG+ HY CM DLLGRAGL++EAL++++ M P GG
Sbjct: 393 AGMVTDGRYYFAQMKDKYGILPSADHYTCMVDLLGRAGLVDEALDLVRSMTVEPHGG--- 449
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LLG CRIHG E+A+ AAEH+ KL+PE G Y +L++ A A +W++V K+R+ +
Sbjct: 450 VWGALLGACRIHGKTEVAKVAAEHLFKLEPEGIGNYVLLSNTLAAAGKWDEVSKVRKVMR 509
Query: 474 AGKIKKNAGCSLIQ 487
+ ++KK S +
Sbjct: 510 SRRLKKVPAVSWFE 523
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 165/489 (33%), Positives = 264/489 (53%), Gaps = 30/489 (6%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
++ +IHAH L G L SP H + ++ LSYA + P
Sbjct: 32 RLREIHAHLLVSGRL-ASPSHHADFVASLASSSH------------LSYARLLLPQRP-A 77
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC------------- 121
+ ++N ++RA L P + F+ R + + PD YSF FL+RA
Sbjct: 78 TLLAHNGLLRA--LARGPCPGLA-FAAFRELPLAPDHYSFTFLVRAATSLAAAASATPVP 134
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + + LA ++H+ + G D V + + +Y + + F EI+ DVV
Sbjct: 135 TDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVT 194
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++ GD+ AR+LFD MP RD V+W ++ GY + + EA+ LF M +
Sbjct: 195 AMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAV 254
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ LVS L+ACA++G LE+G +H Y+ +RV L T LVD Y+KCG + ++E+F
Sbjct: 255 SEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVF 314
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
E+ +E+N++TW + L GLAM+G+G L F RM A ++P+GVT + L GCS AGLV+
Sbjct: 315 ETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVE 374
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E R FD M+ + V L+HYGCM DL GRAG +++A++ I MP+ VW LL
Sbjct: 375 EGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNA 434
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
RIH NV++ + A + +++ ++ + +L+++YA + W+ V K+R + + +KK
Sbjct: 435 SRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMP 494
Query: 482 GCSLIQLNG 490
GCS I+++G
Sbjct: 495 GCSAIEVDG 503
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 279/548 (50%), Gaps = 78/548 (14%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ K + +++Q+ + + GL L+A + K + S S T P A
Sbjct: 14 LESWKNLHELNQVLSQLIVSGLS--------QHPLFATSAIKKLCSHS--VTFP--RATF 61
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSS-PLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+++ +P F NTIIRA+ P + +M S+PP+ Y+FP L++ C+ +
Sbjct: 62 LFDHLHHPDAFHCNTIIRAYARKPDFPAALRFYYCKMLARSVPPNHYTFPLLIKVCTDIG 121
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY----------- 174
S H++++K GF D+F NSL+ +Y VF R+ +A+ +FDE +
Sbjct: 122 SFREGLKGHARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNSMID 181
Query: 175 --------------------RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
RDV+S N LI GYV GDL A +LF+ +P RDAVSW +
Sbjct: 182 GYVKNGEIGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERDAVSWNCM 241
Query: 215 VAGYAQSDQCEEAIQLF----------------------------CNMM------DLDIK 240
+ G A+ A++ F C M+ +
Sbjct: 242 IDGCARVGNVSLAVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVEGREAV 301
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ LVS L+ACA LG+L G +H +I N I+ D L T L+ YAKCG ++ A +
Sbjct: 302 PNEATLVSVLTACANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAKCGAMDLAKGV 361
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +++ +WN+M++G +HG+G +L F M +A +P+ T + L C+HAG+V
Sbjct: 362 FDEMPVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTHAGMV 421
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
E FD M+ VY + +++HYGCM DLL RAGL+E + E+I+ +P+ +W LL
Sbjct: 422 MEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGALLS 481
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GC H + E+ E A+ ++L+P+D G Y +L+++YA RW+DV +R + ++K
Sbjct: 482 GCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRLMIKEKGLQKE 541
Query: 481 AGCSLIQL 488
A SL+ L
Sbjct: 542 AASSLVHL 549
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/501 (34%), Positives = 261/501 (52%), Gaps = 51/501 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSASSPTTDPLSY-- 63
+ K K+ QIH H L G LF+ I + SP D +SY
Sbjct: 146 KSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTA 205
Query: 64 -------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPD 110
A +F+ IP S+N +I + + A+ LF +M +I PD
Sbjct: 206 LIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPD 265
Query: 111 FYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
+ ++ AC+Q S L + +HS + GF ++ ++NSLM
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLM----------------- 308
Query: 171 EILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
D Y K G+L A LF+ + ++D +SW TL+ GY + +EA+ L
Sbjct: 309 --------------DLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFY 288
F M+ +P+++ ++S L ACA LG ++ G+ IH YI+ L S L T L+D Y
Sbjct: 355 FQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMY 414
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
AKCG I A ++F S K+L +WNAM+ G AMHG + FSRM + I+PD +T +
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFV 474
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L CS +G++D R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI M M
Sbjct: 475 GLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEM 534
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D +W LL C+I GNVE+ E+ A++++K++PE+ G Y +L+++YA A RW +V KI
Sbjct: 535 EPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKI 594
Query: 469 RRSLDAGKIKKNAGCSLIQLN 489
R L+ +KK GCS I+++
Sbjct: 595 RALLNDKGMKKVPGCSSIEID 615
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 239/434 (55%), Gaps = 24/434 (5%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CKT++ + IHA + GL YA++ + SP D L YA
Sbjct: 38 SLLHNCKTLQSLRLIHAQMIKTGL---------HNTNYALSKLLELC-VISPHFDGLPYA 87
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+F I P+ +NT+ R H L S P++A+ L+ M ++ + P+ Y+FPFLL++C++
Sbjct: 88 ISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKS 147
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q IH VLKLG+ D+FV SL+ VY RL DA+++FD +RDVVS LI
Sbjct: 148 KAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALI 207
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY G + A++LFD +P +D VSW +++GYA++ +EA++LF MM +I+PD
Sbjct: 208 KGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDES 267
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ +SACA+ G +E G+ +H +I+ + + + L+D Y+KCG + TA +FE
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGL 327
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
K++ +WN ++ G L + +L+ F M+ + +P+ VT+L L C+H G +D R
Sbjct: 328 LYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGR 387
Query: 365 KLFDEMESVYGVSKELKH-------YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
+ VY + K LK + D+ + G IE A ++ + + + W+
Sbjct: 388 WIH-----VY-IDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNA 440
Query: 418 LLGGCRIHGNVEIA 431
++ G +HG + A
Sbjct: 441 MIFGFAMHGRADAA 454
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/539 (32%), Positives = 282/539 (52%), Gaps = 74/539 (13%)
Query: 14 KQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
+++ Q+HA F K +F P + + ++ S P + L YA SIF+ I
Sbjct: 27 QEVEQLHA-FSLKTAIFNHP----------FVSSRLLALYSDPKINDLGYARSIFDRIQR 75
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
S +NTII+ + + +VLF ++ +P +F + P +++ C++L + I
Sbjct: 76 RSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDNF-TLPCVIKGCARLGVVQEGKQI 134
Query: 134 HSQVL-------------------KLGFI-C-----------DVFVLNSLMHVYC----- 157
H L K G I C DV + NSL+ Y
Sbjct: 135 HGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEI 194
Query: 158 -----VFHRL--RDA-------------------QELFDEILYRDVVSCNTLIDGYVKAG 191
+F + RDA ++LFD++ R++VS N +I+GY+K+G
Sbjct: 195 DIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSG 254
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
D A +LF +MP D V+W ++AGY + Q +A+++F M+ L +P + LVS LS
Sbjct: 255 DFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLS 314
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
A + L L +G+ IH Y+E N +D L T L++ YAKCG I +A+ +F + Q+K +
Sbjct: 315 AVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 374
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W A++VGL +HG+ +L F M + +KP+ + +G L C+HAGLVD+ R+ FD M
Sbjct: 375 WTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 434
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ Y + L+HYGC+ D+L RAG +EEA I+ MP+ + +W LLGG R HG ++I
Sbjct: 435 NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIG 494
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E AA+ V+++ PE G Y +L+++YA + WE V +R + +K+ GCS ++ G
Sbjct: 495 EYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKG 553
>gi|357153075|ref|XP_003576330.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g18840-like [Brachypodium distachyon]
Length = 535
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 265/512 (51%), Gaps = 65/512 (12%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+ + R + HQ+HA + GLL L A+ + P SSAS+ L+
Sbjct: 19 SRLLPRRGSAAAGHQLHAVLIKHGLLHH------PASLRALLSRLPPSSAST-----LAL 67
Query: 64 ALSIFNNIPYPSTFS---YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS P + S Y+ I A P ++ +F+++ +S+P +FP LL++
Sbjct: 68 LLSA-----APCSLSPPLYSPAIAALASSPYPAASLAVFNRVSRLSLPIPLPAFPALLKS 122
Query: 121 CSQ---LCSH---------SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
C++ LC+ S +H VLKLG D +V N+L+ +Y RL DA+++
Sbjct: 123 CARAFNLCAAADGGGEGFVSKGMELHGCVLKLGCGADRYVQNALVSMYGKLGRLGDARKV 182
Query: 169 FDEILYRDVVSCNTLIDG-------------------------------YVKAGDLAHAR 197
FD + R+ VS N L+ + + GD+ A
Sbjct: 183 FDGMPARNAVSWNALVAAHGDVGDSRGAERVSQEMPERSVSWWNAEITRHARVGDMEAAA 242
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
++F MP RDAVSW +L+ YA+ QC A+++F M D ++P + LVS L AC +G
Sbjct: 243 RVFREMPGRDAVSWNSLIGSYAKLGQCARALKVFREMQDSGVEPTELTLVSVLGACTEIG 302
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
ELE GK +H Y+ + D ++ LVD YAKCG + A ++FES +++ WNAM+V
Sbjct: 303 ELELGKGVHGYLSSKGVLADGYVGNALVDMYAKCGSLELARQVFESMSTRDITCWNAMIV 362
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
GL++HG R +L F+ M R++PD VT LG L+ CSH+GLVDE R F M Y +
Sbjct: 363 GLSVHGYSREALELFNVM---RVEPDHVTFLGVLIVCSHSGLVDEGRVXFRSMTEDYKIV 419
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+KHYGCM D+L R G + EA +M+ MP+ + +W +L CR+HG++ A A
Sbjct: 420 PGVKHYGCMVDMLCRCGKVAEAYQMLNYMPLKANSVLWKMVLAACRLHGHIHHANKAFHE 479
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
+ +L P D G +++ +YA RW+DV +R
Sbjct: 480 LHQLMPIDDGDVIMMSSIYAEGKRWDDVEHLR 511
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 268/478 (56%), Gaps = 45/478 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++ + Q+HAH + GL H ++L + + + +A S ++YA +F +P
Sbjct: 40 LRNLQQVHAHIIVSGL------HRSRSLLTKLISL--VCTAGS-----ITYARRLFPTVP 86
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P +F ++++++ + F ++ V+ + +M P Y+F +++AC+ L + L +
Sbjct: 87 NPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKE 146
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
IHS V+ G+ D++V +L+ +Y KA D
Sbjct: 147 IHSHVMVCGYGSDMYVQAALIALY-------------------------------AKASD 175
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ A+++FD MP R ++W +L++GY Q+ +E+I LF MM+ +PD+ +VS LS+
Sbjct: 176 MKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSS 235
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
C++LG L+ G +H Y + N ++ L T L++ Y +CG ++ A E+F+S +E+N+ TW
Sbjct: 236 CSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTW 295
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
AM+ G MHG GR ++ F+ M +P+ +T + L C+H+GL+D+ R++F M+
Sbjct: 296 TAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKE 355
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKK-MPMGGDVFVWSGLLGGCRIHGNVEIA 431
YG+ ++H CM D+ GRAGL+ +A + IKK +P VW+ +LG CR+H N ++
Sbjct: 356 AYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLG 415
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
AEHV+ ++PE+ G Y +L+++YA A R + V +R + ++KK G S I++N
Sbjct: 416 VKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEIN 473
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 20/277 (7%)
Query: 161 RLRDAQELFDEI----LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
RLR+ Q++ I L+R LI AG + +AR+LF +P D+ + +L+
Sbjct: 39 RLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLK 98
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
++ + + + M+ N S + ACA L L GK IH ++ +
Sbjct: 99 VTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGS 158
Query: 277 DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
D ++ L+ YAK + A ++F++ ++ + WN+++ G +GL + S+ F M+
Sbjct: 159 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 218
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMADL 389
E+ +PD TI+ L CS G +D L D ++ V G S + ++
Sbjct: 219 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTS--------LINM 270
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
R G + +A E+ M +V W+ ++ G +HG
Sbjct: 271 YTRCGNVSKAREVFDSMK-ERNVVTWTAMISGYGMHG 306
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 244/431 (56%), Gaps = 1/431 (0%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
D L A IF+ +P + S++ +I + P ++ LF +M P+ F +L
Sbjct: 264 DELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSIL 323
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A + + + IH V K+GF DVFV +SL+ +YC +D + LFD IL +++V
Sbjct: 324 SALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMV 383
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N ++ GY G + A+ LF+ MP R+ VSW ++AG+ +Q +E ++F M+ L
Sbjct: 384 SWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLG 443
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
P+ S L ACA L++GKN+H I I+ D+++ T L D YAK G I ++
Sbjct: 444 EIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSK 503
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHA 357
++F +KN +W AM+ GLA GL SL F M + + I P+ V L L CSH+
Sbjct: 504 KVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHS 563
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLVD+ F+ ME+VYG+ + +H+ C+ D+L RAG + EA E I MP + W+
Sbjct: 564 GLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAA 623
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LL GC+ + N E+AE A + ++ ++ Y +L+++YA+A RW DV+K+R+ + A +
Sbjct: 624 LLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGL 683
Query: 478 KKNAGCSLIQL 488
KK+ GCS +++
Sbjct: 684 KKSGGCSWVEI 694
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 187/393 (47%), Gaps = 33/393 (8%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F P+ + S+ I + + A+ LF ++ + P+ +F ++RAC+ L
Sbjct: 141 FERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDF 200
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L ++ ++K G+ D+ V NSL+ + + A+E+FD + +DVVS ++D Y
Sbjct: 201 GLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLY 260
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
V+ +L AR++FD MP R+ VSW ++A Y QS EE+++LFC M+ KP+
Sbjct: 261 VEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFS 320
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S LSA A + L+ G NIH ++ D F+S+ L+D Y KCG +F++ EK
Sbjct: 321 SILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEK 380
Query: 308 NLFTWNAMLVGLAMHG------------------------LGRLSLVYFSRMIEARIK-- 341
N+ +WNAM+ G +++G G L F M E +
Sbjct: 381 NMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMI 440
Query: 342 -----PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
P+ T L C+ +D+ + L ++ + G+ + + D+ ++G I
Sbjct: 441 LLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKL-GIQCDTYVGTALTDMYAKSGDI 499
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
E + ++ +MP +V W+ ++ G G E
Sbjct: 500 ESSKKVFNRMPKKNEV-SWTAMIQGLAESGLAE 531
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 55/298 (18%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+ V N ++ L +A++LFDE+ + +S LI G++K G + + F+R P
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
F++ VSW ++GY Q+ EA++LF +++ ++KP+ + S + ACA LG+ G +
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMS 205
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML-VGLAMHG 323
+ I D +S L+ + G I+ A E+F+ +EK++ +W A+L + + M
Sbjct: 206 VLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDE 265
Query: 324 LGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
LG EAR++FDEM VS +
Sbjct: 266 LG------------------------------------EARRIFDEMPQRNEVS-----W 284
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLL----------GGCRIHGNV 428
M ++G EE+L + +M G ++ +S +L G IHG+V
Sbjct: 285 SAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHV 342
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 255/457 (55%), Gaps = 38/457 (8%)
Query: 35 HILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN 94
++L + LY TT + +A L A +F + + + + ++I + P
Sbjct: 108 YMLHSDLYIETTLLNMYAACGD----LKSARFLFERMGHRNKVVWTSMISGYMKNHCPNE 163
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGF-ICDVFVLNSLM 153
A++L+ +M PD + L+ AC++L + +HS + ++ IC V
Sbjct: 164 ALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVL------ 217
Query: 154 HVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
+ L++ Y K GDL ARQ+FD++ +D +W
Sbjct: 218 --------------------------GSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSA 251
Query: 214 LVAGYAQSDQCEEAIQLFCNMMD-LDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
L+ GY ++++ EA+QLF + +++P+ + +++ +SACA+LG+LE G+ +H YI
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
Q L+ L+D ++KCG I+ A IF+S K+L +WN+M+ G A+HGLGR +L F
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQF 371
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
M ++PD +T +G L CSHAGLV E +KLF E+E++YGV + +HYGCM DLL R
Sbjct: 372 RLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCR 431
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVL 452
AGL+ EA E I+ MP+ D +W +LG CR++ N+E+ E AA ++KL+P + GVY +L
Sbjct: 432 AGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILL 491
Query: 453 ADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+++YA W +V K+R ++ I+K GCS + ++
Sbjct: 492 SNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVID 528
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 48 KPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTV 105
K I+ S + + YA S+F + ++N+++RA + P A+ +++M R+
Sbjct: 15 KLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSR 74
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
++P D ++FP LL+ C+ L + + +H QV+K D+++ +L+++Y L+ A
Sbjct: 75 NVP-DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC- 224
+ LF+ + +R+ V ++I GY+K + C
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMK--------------------------------NHCP 161
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
EA+ L+ M + PD + + + +SACA L +L G +H +I +++ + L + L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPD 343
V+ YAKCG + TA ++F+ +K+++ W+A++ G + +L F + + ++P+
Sbjct: 222 VNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
VTIL + C+ G ++ R + D + + G S L + + D+ + G I+ A +
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN--SLIDMFSKCGDIDAAKRI 339
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHG 426
M D+ W+ ++ G +HG
Sbjct: 340 FDSMSY-KDLISWNSMVNGFALHG 362
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 263/505 (52%), Gaps = 55/505 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA----ITTFKPISSASS--------- 55
+ K ++ QIHA L G H +YA + + + ASS
Sbjct: 76 KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTA 135
Query: 56 -----PTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPD 110
+ A +F+ I S+N +I + A+ LF +M ++ PD
Sbjct: 136 LITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195
Query: 111 FYSFPFLLRACSQLCSHSLAQTIHSQVLKL----GFICDVFVLNSLMHVYCVFHRLRDAQ 166
+ ++ AC+Q S L + +HS V GF + ++N+L
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNAL-------------- 241
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
ID Y K GD+ A LF+ + +D VSW TL+ GY ++ +E
Sbjct: 242 -----------------IDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKE 284
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGL 284
A+ LF M+ P+++ L+S L ACA LG ++ G+ IH YI+ L + ++ L T L
Sbjct: 285 ALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSL 344
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
+D YAKCG I A ++F S ++L +WNAM+ G AMHG + FSRM R++PD
Sbjct: 345 IDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDD 404
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
+T +G L CSH+GL+D R++F M Y ++ +L+HYGCM DLLG +GL +EA EMI
Sbjct: 405 ITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIH 464
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
MPM D +W LL C+ HGN+E+AE+ A+ ++K++PE+ G Y +L+++YA A RWED
Sbjct: 465 TMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWED 524
Query: 465 VVKIRRSLDAGKIKKNAGCSLIQLN 489
V ++R L+ +KK GCS I+++
Sbjct: 525 VARVRGVLNGKGMKKVPGCSSIEVD 549
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 218/383 (56%), Gaps = 8/383 (2%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
SP D L YA+S+F I P+ +NT++R H S P++A+ ++ +M ++ P+ YSF
Sbjct: 8 SPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSF 67
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
PFLL++C++ + + IH+QVLKLG D +V SL+ +Y L DA+++FD +
Sbjct: 68 PFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSH 127
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVSC LI GY GD AR++FD + RD VSW ++ GY ++ + EEA++LF M
Sbjct: 128 RDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEM 187
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST-----GLVDFYA 289
M +++PD LVS +SACA+ G +E G+ +H +++ + F S+ L+D Y+
Sbjct: 188 MRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDD-DHGFSSSLKIVNALIDLYS 246
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG + TA +FE K++ +WN ++ G L + +L+ F M+ + P+ VT+L
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306
Query: 350 ALVGCSHAGLVDEARKLFDEME-SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L C+H G +D R + ++ + GV+ E + D+ + G IE A ++ M +
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM-L 365
Query: 409 GGDVFVWSGLLGGCRIHGNVEIA 431
+ W+ ++ G +HG A
Sbjct: 366 YRSLSSWNAMIFGFAMHGRANAA 388
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 43/228 (18%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN++ Y S S+N +I + A LFS+MR + PD +F LL ACS
Sbjct: 357 AHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACS- 415
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
HS +L LG + S+ Y + +L +
Sbjct: 416 ----------HSGLLDLGRQ----IFKSMTQDYNLTPKLEHY---------------GCM 446
Query: 184 IDGYVKAGDLAHARQLFDRMPFR-DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
ID +G A ++ MP D V W +L+ + E A + F + + I+P+
Sbjct: 447 IDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELA-ESFAQKL-IKIEPE 504
Query: 243 N---IALVSALSAC-------ARLGELEQGKNIHRYIELNQIRVDSFL 280
N L+S + A AR+ + GK + + + I VDS +
Sbjct: 505 NSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVV 552
>gi|449507733|ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 442
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 249/428 (58%), Gaps = 14/428 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + + CK++ ++ +IHA T G+ TI + F SA SP D L
Sbjct: 15 TLISLLDGCKSMFELKRIHALLFTLGI------SQDETIKSKLLLF----SALSPARD-L 63
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
Y+ + N+P P+TF++NT+IRA + +P ++ +F +M + PD+ ++PFL++A
Sbjct: 64 DYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKAT 123
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S+L + L +H ++K G D F+ NSL+H+Y + A+++FDE+ +++V+ N
Sbjct: 124 SKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWN 183
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++DGY K GDL AR++F+ MP +D VSW +L+ GY + EA+ LF M
Sbjct: 184 AMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMA 243
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + LVSAL ACA LG LE G+ +HRYI N++ + L T LVD YAKCG I+ A+ +F
Sbjct: 244 NEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVF 303
Query: 302 E--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
S QE ++ WNA++ GLA HGL + ++ F M I PD +T L L C+H GL
Sbjct: 304 RACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGL 363
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+EA FD + +G+ +++HY CM D L RAG + EA + + +MP+ + LL
Sbjct: 364 VEEAWYFFDCLRK-HGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALL 422
Query: 420 GGCRIHGN 427
GC HGN
Sbjct: 423 SGCMKHGN 430
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 41/285 (14%)
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L A DL ++ +L +P +W TL+ ++ + +I +F M+ + PD
Sbjct: 53 LFSALSPARDLDYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPD 112
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ + A ++L E G +H +I + +D F+ L+ YA C I +A ++F+
Sbjct: 113 YLTYPFLVKATSKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFD 172
Query: 303 SSQEKNLFTWNAMLVGLAMHG-----------LGRLSLVYFSRMIEARIKP--------- 342
KNL TWNAML G A G + +V +S +I+ +K
Sbjct: 173 EMPRKNLVTWNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMAL 232
Query: 343 ------DG-----VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH----YGCMA 387
DG VT++ AL C+H G ++ R M Y V EL +
Sbjct: 233 FERMSFDGPMANEVTLVSALCACAHLGALEHGR-----MMHRYIVENELPLTIVLQTSLV 287
Query: 388 DLLGRAGLIEEALEMIKKMPMG-GDVFVWSGLLGGCRIHGNVEIA 431
D+ + G I EAL + + + DV +W+ ++GG HG ++ A
Sbjct: 288 DMYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLATHGLIKEA 332
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 268/478 (56%), Gaps = 45/478 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++ + Q+HAH + GL H ++L + + + +A S ++YA +F +P
Sbjct: 104 LRNLQQVHAHIIVSGL------HRSRSLLTKLISL--VCTAGS-----ITYARRLFPTVP 150
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P +F ++++++ + F ++ V+ + +M P Y+F +++AC+ L + L +
Sbjct: 151 NPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKE 210
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
IHS V+ G+ D++V +L+ +Y KA D
Sbjct: 211 IHSHVMVCGYGSDMYVQAALIALY-------------------------------AKASD 239
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ A+++FD MP R ++W +L++GY Q+ +E+I LF MM+ +PD+ +VS LS+
Sbjct: 240 MKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSS 299
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
C++LG L+ G +H Y + N ++ L T L++ Y +CG ++ A E+F+S +E+N+ TW
Sbjct: 300 CSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTW 359
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
AM+ G MHG GR ++ F+ M +P+ +T + L C+H+GL+D+ R++F M+
Sbjct: 360 TAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKE 419
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKK-MPMGGDVFVWSGLLGGCRIHGNVEIA 431
YG+ ++H CM D+ GRAGL+ +A + IKK +P VW+ +LG CR+H N ++
Sbjct: 420 AYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLG 479
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
AEHV+ ++PE+ G Y +L+++YA A R + V +R + ++KK G S I++N
Sbjct: 480 VKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEIN 537
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 20/277 (7%)
Query: 161 RLRDAQELFDEI----LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
RLR+ Q++ I L+R LI AG + +AR+LF +P D+ + +L+
Sbjct: 103 RLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLK 162
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
++ + + + M+ N S + ACA L L GK IH ++ +
Sbjct: 163 VTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGS 222
Query: 277 DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
D ++ L+ YAK + A ++F++ ++ + WN+++ G +GL + S+ F M+
Sbjct: 223 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 282
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMADL 389
E+ +PD TI+ L CS G +D L D ++ V G S + ++
Sbjct: 283 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTS--------LINM 334
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
R G + +A E+ M +V W+ ++ G +HG
Sbjct: 335 YTRCGNVSKAREVFDSMKE-RNVVTWTAMISGYGMHG 370
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 242/436 (55%)
Query: 54 SSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYS 113
S + L + F+ + + S+N++I + LF +MR D ++
Sbjct: 156 SYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFT 215
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
LL ACSQ + + + +H ++L G D+ + ++L+ +Y L A+ F+ +
Sbjct: 216 LVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMP 275
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
+ VVS +++ K G + AR FD MP R+ VSW +++ Y Q QC EA+ L+
Sbjct: 276 IKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQ 335
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M + PD I LV+ LSA R+G+L GK +H YI N D L L+D YAKCG
Sbjct: 336 MQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQ 395
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
++TAI +F +N+ +WN ++ GLAMHG ++ +F M+ PDG+T + L
Sbjct: 396 VDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSA 455
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSH GL++ + F+ M VY V E++HY CM DLLGR G +E+A+ +IK+MPM DV
Sbjct: 456 CSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVV 515
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LLG CRIHGNV+I + +++L+ GG++ +++++ +WED+ ++R+ +
Sbjct: 516 VWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRLRKLMK 575
Query: 474 AGKIKKNAGCSLIQLN 489
+K+ G S I++N
Sbjct: 576 EWGTRKDMGVSSIEIN 591
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 178/372 (47%), Gaps = 47/372 (12%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
+L +++C++I++++Q+HAH L G L + + +L A ++ ++ A L
Sbjct: 13 SLQKLLRQCRSIQRLNQLHAHLLVHGSLSAA-----SDLLLA--SYCALAKAGHGV---L 62
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+A +F+ IP P YNTIIRA+ S P A+ L M I P+ ++ PF+++AC
Sbjct: 63 CHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKAC 122
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + A +H L+LG + VFV N+L+H Y L D++ FDE++ R+VVS N
Sbjct: 123 TIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWN 182
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++I GY +AGD E LF M
Sbjct: 183 SMIGGYAQAGD-------------------------------TREVCSLFGEMRRQGFLE 211
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D LVS L AC++ G LE G+ +H + ++ RVD L + LVD Y KCG + A F
Sbjct: 212 DEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCF 271
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC-SHAGLV 360
E K++ +W +ML HG + +F M E I A++ C G
Sbjct: 272 EMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNI-----VSWNAMISCYVQRGQC 326
Query: 361 DEARKLFDEMES 372
EA L+++M+S
Sbjct: 327 HEALDLYNQMQS 338
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 244/434 (56%), Gaps = 6/434 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
+ ALS+F N+ S S+N II + A+ FS+M T S + PD ++ +L
Sbjct: 245 MDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLS 304
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD--V 177
AC+ L + + +HS +L+ G ++N+L+ Y + A+ + D+ + D V
Sbjct: 305 ACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNV 364
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+S L++GYVK GD AR++FD M RD ++W ++ GY Q+ Q +EA++LF +M+
Sbjct: 365 ISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRS 424
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+P++ L + LSACA L L GK IH R I Q + S +S ++ YA+ G +
Sbjct: 425 GPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVS-VSNAIITVYARSGSVPL 483
Query: 297 AIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A +F+ K TW +M+V LA HGLG ++V F M+ +KPD VT +G C+
Sbjct: 484 ARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACT 543
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAG +D+ ++ +++M + +G+ E+ HY CM DLL RAGL+ EA E I++MP+ D VW
Sbjct: 544 HAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVW 603
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL CR+ N ++AE AAE ++ + P++ G Y LA+VY+ RW D +I +
Sbjct: 604 GSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDK 663
Query: 476 KIKKNAGCSLIQLN 489
+KK G S +
Sbjct: 664 AVKKETGFSWTHVQ 677
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 168/351 (47%), Gaps = 48/351 (13%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC-------VFHRLRDAQ 166
F LL+ + S + IH+ +K G + ++ N+L+ Y FH +A+
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFH---EAR 84
Query: 167 ELFDEILY--RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
LFD+I Y R+ + N+L+ Y K+G LA AR +F +MP RDAVSW +V G ++ +
Sbjct: 85 RLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRF 144
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI--------------- 269
+A++ F +M+ + P L + LS+CA G+ +H ++
Sbjct: 145 WDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSV 204
Query: 270 -----------------ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
E ++R +S + +V Y G ++ A+ +FE+ +E+++ +W
Sbjct: 205 LYMYGKCGDAETARAVFERMKVRSESSWN-AMVSLYTHQGRMDLALSMFENMEERSIVSW 263
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
NA++ G +GL ++L +FSRM+ A ++PD T+ L C++ ++ +++ +
Sbjct: 264 NAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYIL 323
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG-DVFVWSGLLGG 421
G+ + + ++G +E A ++ K + +V ++ LL G
Sbjct: 324 RT-GMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEG 373
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 191/474 (40%), Gaps = 80/474 (16%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F +P S+ ++ +AV F M + P + +L +
Sbjct: 113 LADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSS 172
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + + +HS V+KLG V V NS++++Y A+ +F+ + R S
Sbjct: 173 CAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSW 232
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DI 239
N ++ Y G + A +F+ M R VSW ++AGY Q+ + A++ F M+ +
Sbjct: 233 NAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSM 292
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT--- 296
+PD + S LSACA L L+ GK +H YI + S + L+ YAK G + T
Sbjct: 293 EPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARR 352
Query: 297 ------------------------------AIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
A E+F+ +++ W AM+VG +G
Sbjct: 353 IMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQND 412
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGC-------------------------------- 354
++ F MI + +P+ T+ L C
Sbjct: 413 EAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAII 472
Query: 355 ---SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG- 410
+ +G V AR++FD++ KE + M L + GL E+A+ + ++M G
Sbjct: 473 TVYARSGSVPLARRVFDQI----CWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGV 528
Query: 411 --DVFVWSGLLGGCRIHGNVEIAEAAAEHVMK---LKPEDGGVYKVLADVYANA 459
D + G+ C G ++ + E ++ + PE Y + D+ A A
Sbjct: 529 KPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSH-YACMVDLLARA 581
>gi|357520897|ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 447
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 235/409 (57%), Gaps = 35/409 (8%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P++F++N IIR++T SP NA+ ++ M + PD Y+ P +L+A SQ + L Q +
Sbjct: 60 PASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQV 119
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
HS +KLG + + + +++YC KAGD
Sbjct: 120 HSYGIKLGLQSNEYCESGFINLYC-------------------------------KAGDF 148
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A ++FD SW L++G +Q +AI +F +M +PD I +VS +SAC
Sbjct: 149 DSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSAC 208
Query: 254 ARLGELEQGKNIHRYI---ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
+G+L +H+Y+ + N+ V +S L+D Y KCG ++ A E+F + +++N+
Sbjct: 209 GSIGDLYLALQLHKYVFQAKTNEWTV-ILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVS 267
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W +M+VG AMHG + +L F M E+ +KP+ VT +G L C H G V E R FD M
Sbjct: 268 SWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMM 327
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+++YG++ +L+HYGCM DLLGRAGL ++A M+++MPM + VW L+G C HGNV++
Sbjct: 328 KNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDM 387
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
AE AE++ L+P + GVY VL+++YAN W++V +IR + G++ K
Sbjct: 388 AEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAK 436
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 31/262 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ P S+N +I + ++A+V+F M+ PD + ++ AC
Sbjct: 151 AHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGS 210
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ LA +H +V + + + V ++ N+L
Sbjct: 211 IGDLYLALQLHK-----------YVFQAKTNEWTV------------------ILMSNSL 241
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G + A ++F M R+ SW +++ GYA +EA+ F M + +KP+
Sbjct: 242 IDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNY 301
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
+ + LSAC G +++G+ ++ G +VD + G + A + E
Sbjct: 302 VTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVE 361
Query: 303 SSQEK-NLFTWNAMLVGLAMHG 323
K N W ++ HG
Sbjct: 362 EMPMKPNSVVWGCLMGACEKHG 383
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 281/574 (48%), Gaps = 109/574 (18%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
++KQ Q+HA L GL L P I + + SAS+ + Y S+ ++
Sbjct: 16 SVKQAKQVHALILIHGLSHLEP----------ILARQILISASNYSATVAQYVHSVLHHS 65
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P +FS+ IR T A L+ QM+ + P ++ L+AC+++
Sbjct: 66 KSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGI 125
Query: 132 TIHSQVLKLGFICD---VFVLNSLMHVYC----------VFHRLRD-------------- 164
+IH QV K GF C ++V +L+ YC +F + +
Sbjct: 126 SIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 185
Query: 165 -------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHA--------------------- 196
AQ +FDEI +DV+S N++I GY +AGD+ A
Sbjct: 186 KSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERNFASWNAMISG 245
Query: 197 ----------RQLFDRMPFRDAVSWGTLVAGY---------------------------- 218
R FD MP ++ VSW T+++GY
Sbjct: 246 HVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI 305
Query: 219 ---AQSDQCEEAIQLFCNMMD--LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
AQ+ + EA+ LF NM++ ++++PD + L S +SAC++LG+L G I Y+
Sbjct: 306 ACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLG 365
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
I +D L+T L+D YAKCG I+ A E+F ++K+L + AM++G ++G ++ F
Sbjct: 366 IEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFD 425
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
M++A+I P+ +T +G L +HAGLV+E + F M+ Y + + HYG M DL GRA
Sbjct: 426 EMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLFGRA 484
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
G ++EALE+IK MPM VW LL CR+H NVE E AA+H +L+P+ G +L+
Sbjct: 485 GRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLS 544
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
++YA+ +RW+DV ++R+ K GCS ++
Sbjct: 545 NIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 245/427 (57%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ + YNTI+ + + +V+ +M PD + + AC+Q
Sbjct: 285 ARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQ 344
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L S+ ++ H+ VL+ G + N+++ +Y + A ++F+ + + VV+ N+L
Sbjct: 345 LGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSL 404
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G V+ GD+ A ++FD M RD VSW T++ Q EEAI+LF M + I D
Sbjct: 405 IAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDR 464
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +V SAC LG L+ K + YIE N I VD L T LVD +++CG ++A+ +F+
Sbjct: 465 VTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKR 524
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+++++ W A + +AM G ++ F+ M+E ++KPD V + L CSH G VD+
Sbjct: 525 MEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQG 584
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+LF ME +G+ + HYGCM DLLGRAGL+EEA+++I+ MP+ + VW LL CR
Sbjct: 585 RQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACR 644
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
H NVE+A AAE + +L PE G++ +L+++YA+A +W DV ++R + ++K G
Sbjct: 645 KHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGS 704
Query: 484 SLIQLNG 490
S I++ G
Sbjct: 705 SSIEVQG 711
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 206/435 (47%), Gaps = 53/435 (12%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+ + CKT+K++ Q+H + KGLL P L ++ SS T + L Y
Sbjct: 29 SKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLI--------ASSVQIGTLESLDY 80
Query: 64 ALSIF--NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A + F ++ S F YN +IR + A++L+ QM + I PD Y+FPFLL AC
Sbjct: 81 ARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSAC 140
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S++ + S +H VLK+G D+FV NSL+H Y
Sbjct: 141 SKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFY------------------------- 175
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+ G + R+LFD M R+ VSW +L+ GY+ D +EA+ LF M + ++P
Sbjct: 176 ------AECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEP 229
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + +V +SACA+L +LE GK + YI + + + + LVD Y KCG I A +IF
Sbjct: 230 NPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIF 289
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ KNL +N ++ H LV M++ +PD VT+L + C+ G +
Sbjct: 290 DECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLS 349
Query: 362 EARK-----LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+ L + +E +S + D+ + G E A ++ + MP V W+
Sbjct: 350 VGKSSHAYVLRNGLEGWDNISNAI------IDMYMKCGKREAACKVFEHMP-NKTVVTWN 402
Query: 417 GLLGGCRIHGNVEIA 431
L+ G G++E+A
Sbjct: 403 SLIAGLVRDGDMELA 417
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 185/415 (44%), Gaps = 72/415 (17%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + + S+ ++I ++ AV LF QM + P+ + ++ AC++L
Sbjct: 187 LFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKD 246
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L + + S + +LG L+++M N L+D
Sbjct: 247 LELGKKVCSYISELGM-----ELSTIM--------------------------VNALVDM 275
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y+K GD+ ARQ+FD ++ V + T+++ Y + + + + M+ +PD + +
Sbjct: 276 YMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTM 335
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S ++ACA+LG+L GK+ H Y+ N + +S ++D Y KCG A ++FE
Sbjct: 336 LSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPN 395
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K + TWN+++ GL G L+ F M+E R T++GALV S + +EA +L
Sbjct: 396 KTVVTWNSLIAGLVRDGDMELAWRIFDEMLE-RDLVSWNTMIGALVQVS---MFEEAIEL 451
Query: 367 FDEME---------SVYGVSKELKHYG-------------------------CMADLLGR 392
F EM+ ++ G++ + G + D+ R
Sbjct: 452 FREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSR 511
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVM--KLKPED 445
G A+ + K+M DV W+ +G + GN E A ++ K+KP+D
Sbjct: 512 CGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDD 565
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 135/308 (43%), Gaps = 37/308 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A IF+ + S+NT+I A S A+ LF +M+ IP D + + A
Sbjct: 414 MELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASA 473
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L + LA+ ++C ++ + +HV D+
Sbjct: 474 CGYLGALDLAK----------WVC-TYIEKNDIHV--------------------DLQLG 502
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D + + GD + A +F RM RD +W + A E AI+LF M++ +K
Sbjct: 503 TALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVK 562
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD++ V+ L+AC+ G ++QG+ + +E + IR +VD + G + A++
Sbjct: 563 PDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVD 622
Query: 300 IFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD--GVTILGALVGCSH 356
+ +S E N W ++L H + L +++ ++ P+ G+ +L + + S
Sbjct: 623 LIQSMPIEPNDVVWGSLLAACRKH--KNVELAHYAAEKLTQLAPERVGIHVLLSNIYASA 680
Query: 357 AGLVDEAR 364
D AR
Sbjct: 681 GKWTDVAR 688
>gi|296087990|emb|CBI35273.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 237/442 (53%), Gaps = 72/442 (16%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+NTII A S L++V + M PD ++FPFL+++ S + L +H+ V+
Sbjct: 2 FNTIIMAS---SRTLDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVV 58
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE--------------------------- 171
K G DVFV+N+++ +Y F LR A+++FDE
Sbjct: 59 KFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEAR 118
Query: 172 -----ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
+ ++ VS N +I GY + + AR+LFD MP RDA SW +V+GY+Q C E
Sbjct: 119 KIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNE 178
Query: 227 AIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
A+ LF M+ D + P+ ALVSA+SACA+L LE+G+ +H YI+ ++R+
Sbjct: 179 ALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRI--------- 229
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
N L GLA++G G+ +L F +M P+ +
Sbjct: 230 ---------------------------NVTLAGLALNGCGKEALALFWKMQFVGPSPNAI 262
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T + L GCSH+GL+ E R LF M VYG+ +LKHYGCM DLLGRAGL++EAL+ ++K
Sbjct: 263 TFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEK 322
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
MPM +W L+G CRIHG VE+ E + ++ L+P GG Y +L +++A A RW+DV
Sbjct: 323 MPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDDV 382
Query: 466 VKIRRSLDAGKIKKNAGCSLIQ 487
+R K+ KN G S+++
Sbjct: 383 AMVRDLEKGRKVLKNPGNSIVE 404
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 216/359 (60%), Gaps = 1/359 (0%)
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR-DVVSCNTLIDGYVKAG 191
+HS +++ G D SL+ YC + A+ +FDE DVVS N +IDGYVK+G
Sbjct: 97 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKSG 156
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
DLA AR+LFD MP R+ VSW ++ YAQ Q EEAI++F M I+PD +AL+S LS
Sbjct: 157 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLS 216
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
AC LG ++ G+ +HR++ + + L ++D Y KCG + A+E+FE ++K++ T
Sbjct: 217 ACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVT 276
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W M+ G A+HGLG ++ F RM + + P+ +T L L CSH GL D R F M
Sbjct: 277 WTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMV 336
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S Y + ++HYGCM DLLGRAG + EA +I+ MP + +W LL R HG+ E+
Sbjct: 337 SQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELG 396
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E A H+++L+P + G Y +L+++YA +RW+ V ++R S+ ++ G S I ++G
Sbjct: 397 EQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDG 455
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ +P + S+ +I A+ P A+ +F +M+ I PD + +L A
Sbjct: 158 LARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSA 217
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L L + +H VL+ G ++ ++N+++ +Y ++ A E+F+ + + +V+
Sbjct: 218 CGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTW 277
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
T+I AG+A EA++LF M ++
Sbjct: 278 TTMI-------------------------------AGFALHGLGLEAVELFRRMEKENVS 306
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAI 298
P++I ++ LS C+ +G + G+ + + ++Q ++ + ++D + G + A
Sbjct: 307 PNDITFLAVLSVCSHVGLTDLGRWYFKTM-VSQYKIKPRVEHYGCMIDLLGRAGCLMEAR 365
Query: 299 EIFESSQEK-NLFTWNAMLVGLAMHG---LGRLSLVYF 332
+ + K N W A+L HG LG +L++
Sbjct: 366 GLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHL 403
>gi|449436789|ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 235/430 (54%), Gaps = 32/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A F +IP P F N++IRA + P + L++ M SI P+ Y+FPF+L++
Sbjct: 60 LGSAFLFFTHIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKS 119
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ Q++H+ V+K G D++V N+LM
Sbjct: 120 LADFKDLVGGQSVHTHVVKSGHASDLYVQNTLM--------------------------- 152
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
D Y G + +++FD M D VSW L+ GY S ++A+ +F M +
Sbjct: 153 ----DVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFMLDDALIVFEQMQYAGVD 208
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + +V+AL+ACA G +E G IH +++ + VD L T L+D Y KCG I A+ +
Sbjct: 209 PNRVTIVNALAACASFGAIEMGVWIHEFVKTKRWEVDVVLGTALIDMYGKCGRIKEALAV 268
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F++ +EKN++TWN + GLA G ++ +F RM E ++ D VT++ L CSH+GLV
Sbjct: 269 FQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEADDVTLVAVLSACSHSGLV 328
Query: 361 DEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+ R++F + +G S +KHY CM D+L R G IEEA MIK MP +W LL
Sbjct: 329 NSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVMIKDMPFEATRSMWGSLL 388
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G R HG++E++E AA +++++PE+GG Y VL+++YA +W +V K+R + +KK
Sbjct: 389 TGSRAHGSLEVSEIAARRLVEMEPENGGYYVVLSNIYAEMGKWSEVEKVREIMKERGLKK 448
Query: 480 NAGCSLIQLN 489
+ G S ++L
Sbjct: 449 DLGSSSVELQ 458
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 234/446 (52%), Gaps = 63/446 (14%)
Query: 107 IPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR--- 163
+ P SF +LR+C+ L + H Q++K+GF D+ + L+ Y L+
Sbjct: 6 VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65
Query: 164 ----------------------------DAQELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
+A+ LFD + R+ S N++I Y K GD+
Sbjct: 66 RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINS 125
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSD-----------------------------QCEE 226
AR +FD P +D VSW ++ GY +S QC E
Sbjct: 126 ARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGE 185
Query: 227 ---AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG 283
AI +F M ++KP + +VS LSACA LG L+ G+ IH YI ++++D L
Sbjct: 186 FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 245
Query: 284 LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
L+D Y KCG + AI++F KN+F WN+++VGL M+G G ++ F M + IKPD
Sbjct: 246 LIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 305
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
GVT +G L GCSH+GL+ ++ F EM VYG+ ++HYGCM DLLGRAG ++EALE+I
Sbjct: 306 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 365
Query: 404 KKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWE 463
+ MPM + V LL C+IH + ++ E + +++L P DGG Y L+++YA+ RW+
Sbjct: 366 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWD 425
Query: 464 DVVKIRRSLDAGKIKKNAGCSLIQLN 489
DV R+ + + K GCS I++N
Sbjct: 426 DVNTCRKLMIKRGVHKTPGCSSIEVN 451
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 46/250 (18%)
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
++ ++NT+I A+ A+ +F QM++ ++ P + LL AC+ L + + + IH
Sbjct: 169 NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIH 228
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+ DV + N+L+ +YC K G L
Sbjct: 229 GYIRTKRLKIDVVLGNALIDMYC-------------------------------KCGALE 257
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
A +F + ++ W +++ G + + EEAI F M IKPD + V LS C+
Sbjct: 258 AAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCS 317
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYINTAIEIFESSQEKN 308
G L G+ RY +++ L G +VD + GY+ A+E+ + K
Sbjct: 318 HSGLLSAGQ---RY--FSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP 372
Query: 309 LFTWNAMLVG 318
N+M++G
Sbjct: 373 ----NSMVLG 378
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M+ D+ P + L +CA GE + G+ H I D L TGL+DFYAK G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A +F +++ NAM+ L+ HG + F M E +++
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERN-----SCSWNSMIT 115
Query: 354 C-SHAGLVDEARKLFD 368
C G ++ AR +FD
Sbjct: 116 CYCKLGDINSARLMFD 131
>gi|449527549|ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 487
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 265/489 (54%), Gaps = 22/489 (4%)
Query: 2 TLNNFI----KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPT 57
T NN I ++CK+++ + QIHAH L L SP YAI +++ S
Sbjct: 5 TFNNAISPLLRKCKSVQHLKQIHAHLLMT-YLPQSP--------YAIAPLLEVAATSGCD 55
Query: 58 TDPL-SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
D SYA IF N+ + F YN++IR + L P A++ + + + Y+FP
Sbjct: 56 RDSFFSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPP 115
Query: 117 LLRACSQLCSH--SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
L++AC+ + + +H+ V+ LG+ D FV+++L+ Y +F L+ A+ LFD+
Sbjct: 116 LIKACALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSG 174
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
+DVV ++DGY K GD+ AR LFD MP R+ +SW ++A Y++ E + LF M
Sbjct: 175 KDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQM 234
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+I P++ +VS L+ACA LG + QG +H Y + + + L+T LVD Y+KCGYI
Sbjct: 235 QKKNIVPNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYI 294
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+A+E+FE K+ WNAM+ G AM G SL F +MI + + T + L C
Sbjct: 295 ESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAAC 354
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---- 410
+HA +V+ + FD+M VY V + +HY C+ DL+ RAG++E+A + +++ MGG
Sbjct: 355 THAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEE-KMGGFSNV 413
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR 470
D VW +L CR + N+EI + + L DGG + ++++ A R ++R+
Sbjct: 414 DANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRK 473
Query: 471 SLDAGKIKK 479
+ KK
Sbjct: 474 KFSEARSKK 482
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 265/503 (52%), Gaps = 55/503 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSA-----SSPTTDPLSY 63
+ K ++ QIHA L GL H+ T+++ + A +S D +SY
Sbjct: 90 KSKAAQEGKQIHAQILKYGLTV--DLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 64 ---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
A +F+ IP S+N +I + A+ LF++M + +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD + +L C+ + L + IHS + GF ++ ++N+L
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNAL---------------- 251
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
ID Y K G++ A LF+ + ++D +SW TL+ GYA + +EA+
Sbjct: 252 ---------------IDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEAL 296
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVD 286
+F M+ L P+++ ++S L ACA LG ++ G+ IH YI+ L I ++ L T L+D
Sbjct: 297 LVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLID 356
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAKCG I A ++F++ K+L + NAM+ G AMHG + SRM + I+PD +T
Sbjct: 357 MYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDIT 416
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L CSHAGL D RK+F M Y + +L+HYGCM DLLGR+GL +EA E+I M
Sbjct: 417 FVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSM 476
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
M D +W LL C+IH N+E+ E A+ +MK++P++ G Y +L+++YA + RW+DV
Sbjct: 477 TMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVA 536
Query: 467 KIRRSLDAGKIKKNAGCSLIQLN 489
++R L+ +KK GCS I+++
Sbjct: 537 RVRTLLNDKGLKKVPGCSSIEID 559
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 223/393 (56%), Gaps = 6/393 (1%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
+P L YA+S+F +I P+ S+NT+IR H L S P++A+ L+ M ++ + P+ Y+F
Sbjct: 22 TPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTF 81
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
PFL ++C++ + + IH+Q+LK G D+ V SL+ +Y + DA ++FD +
Sbjct: 82 PFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSH 141
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS +I GY G++ A+++FD +P +D VSW +++GYA+ + +EA++LF M
Sbjct: 142 RDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEM 201
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
M +D+KPD + + LS C G +E G+ IH +I+ + + L L+D Y+KCG +
Sbjct: 202 MKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEM 261
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A +FE Q K++ +WN ++ G A + +L+ F M++ P+ VT+L L C
Sbjct: 262 ERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPAC 321
Query: 355 SHAGLVDEARKLFDEME-SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
+H G +D R + ++ + G+ + D+ + G IE A ++ + + +
Sbjct: 322 AHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTI-LNKSLS 380
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDG 446
+ ++ G +HG A+AA + + ++K +DG
Sbjct: 381 SCNAMIFGFAMHGR---ADAAFDLLSRMK-KDG 409
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 267/524 (50%), Gaps = 51/524 (9%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C ++ Q+ QI AH L I + + ++ + + +++A
Sbjct: 57 MESCTSMLQLKQIQAHMTKTAL-----------ISHTFPVSRVLAFCALSDSGDINHAHL 105
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + P+T+ +NT+IR ++ + F QM + D SF F L+AC Q
Sbjct: 106 LFSQLQNPNTYIWNTMIRGYSKAKMGQTGFLFFCQMVQKGVEMDCRSFVFALKACEQFLG 165
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+++H V K+GF+ + V N L+H Y + L A+ +FDEI RDVVS ++IDG
Sbjct: 166 VLEGKSVHCVVWKMGFVYTLLVQNGLVHFYGLRGCLGLARLVFDEISERDVVSWTSMIDG 225
Query: 187 YVKAGDLAHARQLFDRMPFRDAV---------------SWGTLVAG-----YAQSDQCEE 226
Y K A +LFD M V G L+ G Y ++
Sbjct: 226 YSKHKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEYVKTRNVTR 285
Query: 227 AIQLFCNMMDLDIK-------------------PDNIALVSALSACARLGELEQGKNIHR 267
++ L ++D+ +K P L L C +LG L+ G+ IHR
Sbjct: 286 SLNLMNAILDMYVKCGCLDSAREIFDTMGAAFAPMENTLACVLPVCGQLGCLDVGQWIHR 345
Query: 268 -YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
Y+ + + L+ L+D YAKCG I+ A ++F E+NL +WN+M+ A HG +
Sbjct: 346 NYVRMRYNEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMITAYASHGHAK 405
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCM 386
+L F RMI KPD +T++G L CSH GLV E ++ F M+ YG+ + +HY CM
Sbjct: 406 QALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIEPKNEHYACM 465
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDG 446
DLLGR GL+E+A E+I KMPM W L+ CR+HGNVE+A+ AA +++L PED
Sbjct: 466 IDLLGRVGLLEDAYELITKMPMEPSAAAWGALVHACRMHGNVEVAKIAAPRLLELDPEDS 525
Query: 447 GVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
G+Y +LA++ A+ RW DV RR + ++KK G S++++ G
Sbjct: 526 GIYVLLANICASGRRWGDVKMARRMMRERRVKKIPGRSIVEVEG 569
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 267/494 (54%), Gaps = 24/494 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I + + + + Q+ + + GL S H L L T + + LSYA
Sbjct: 31 ISKSRHLNHLKQVQSFLIVSGL---SHSHFLCFKLLRFCTLRLCN---------LSYARF 78
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV---SIP-PDFYSFPFLLRACS 122
IF+ +P+T Y ++ ++ S PL+A FS R + S P P+ + +P +L++
Sbjct: 79 IFDRFSFPNTHLYAAVLTGYSS-SLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTP 137
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC--VFHRLRDAQELFDEILYRDVVSC 180
L S +H+ + K GF V V +L+H Y V H + A++LFDE+ R+VVS
Sbjct: 138 YLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSH-ITLARQLFDEMSERNVVSW 196
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDI 239
++ GY ++GD+ +A LF+ MP RD SW ++A Q+ EA+ LF M+ D I
Sbjct: 197 TAMLSGYARSGDIFNAVALFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPCI 256
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ + LV LSACA+ G L+ K IH + + D F+S LVD Y KCG + A
Sbjct: 257 RPNEVTLVCVLSACAQTGTLQLAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR---IKPDGVTILGALVGCSH 356
+F+ S +K+L WN+M+ A+HG ++ F M++ IKPD +T +G L C+H
Sbjct: 317 VFKMSSKKSLTAWNSMINCFALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTH 376
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
GLV + R FD M+ +G+ ++HYGC+ DLLGRAG +EALE + M M D +W
Sbjct: 377 GGLVSKGRGYFDLMKKRFGIEPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWG 436
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C+ +G++++AE A ++++ L P +GG ++A++Y WE+ + R+ +
Sbjct: 437 SLLNACKKYGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQN 496
Query: 477 IKKNAGCSLIQLNG 490
K G S I+++
Sbjct: 497 AYKPPGWSQIEIDN 510
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 273/561 (48%), Gaps = 92/561 (16%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N+ +++C +IKQ+ QIHA LT + H + LY I K +
Sbjct: 35 FNSLLQQCLSIKQLKQIHAQLLTNSI------HKPNSFLYKIADLKD-----------FA 77
Query: 63 YALSIFNNIPYPSTFSYNTIIRA-HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA F+NI P+ +S+N +IR T ++ A+ +S+M+ + + P+ ++PFL AC
Sbjct: 78 YASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIAC 137
Query: 122 SQL-----------------------CSHSLAQTIHSQVLKLGFICDVF---------VL 149
S L SHSL T++++ K+G VF
Sbjct: 138 SNLLAVENGRMGHCSVIRRGLDEDGHVSHSLI-TMYARCGKMGDARKVFDEISQKDLVSW 196
Query: 150 NSLMHVYCVFHRLRDAQELF----------------------------------DEILYR 175
NS++ Y +A LF +E +
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE 256
Query: 176 DVVSCN-----TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
+ ++ N LI Y K GDL AR++FD M +D V+W ++ GYAQ+ EEAI+L
Sbjct: 257 NKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKL 316
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
F +M PD I L+ LSACA +G L+ GK + Y + D ++ T LVD YAK
Sbjct: 317 FQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAK 376
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTIL 348
CG ++ A +F +KN +WNAM+ LA HG + +L F M+ + P+ +T +
Sbjct: 377 CGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFV 436
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L C HAGLVDE R+LF M S +G+ +++HY CM DL RAG +EEA + + MP
Sbjct: 437 GVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPE 496
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D + LLG C+ N++I+E + +++L+P + G Y + + +YAN RW+D ++
Sbjct: 497 KPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARM 556
Query: 469 RRSLDAGKIKKNAGCSLIQLN 489
R + + K GCS I +N
Sbjct: 557 RMLMKQKGVSKTPGCSWIDIN 577
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 244/438 (55%), Gaps = 38/438 (8%)
Query: 53 ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFY 112
A++P + LSYA +F+ IP P T +YNTIIR+H+ F P +++ F MR+ IP D +
Sbjct: 32 AAAP--ESLSYARYVFSRIPSPDTIAYNTIIRSHSRFF-PSHSLFYFFSMRSNGIPLDNF 88
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
+FPF+L+ACS+L + +HS ++K G D+FV N+L+ VY
Sbjct: 89 TFPFVLKACSRL---QINLHLHSLIVKYGLDSDIFVQNALICVY---------------- 129
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
GY G L A ++FD M RD+VSW T++A + + EA+ LF
Sbjct: 130 -------------GY--CGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFE 174
Query: 233 NM-MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M ++ + PD + ++S +SA + LG+LE G+ + +I + V L T L+D +++C
Sbjct: 175 KMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRC 234
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G I+ +I +FE +N+ TW A++ GL +HG +L F M ++ ++PD VT G L
Sbjct: 235 GSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVL 294
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
V CSH GLV E +F+ + VY + L HYGCM D+LGRAGL+ EA + +++MPM +
Sbjct: 295 VACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPN 354
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
+W LLG C H N+ +AE + K+ G +L++VY A RW + IR
Sbjct: 355 SIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSK 414
Query: 472 LDAGKIKKNAGCSLIQLN 489
+ +I K GCS I ++
Sbjct: 415 MREKRIGKEPGCSSINVD 432
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 278/535 (51%), Gaps = 50/535 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGL--------LFLSPCHILTTILYAITTFKPISSA 53
+++ +K C T + Q+HA + KGL FL+ C+ L+ Y + F +SS
Sbjct: 27 SISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSP 86
Query: 54 SSPTTD----------PLSYALSIF----NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF 99
S+ + +S +S+F + P F+Y ++I+A + V
Sbjct: 87 STVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFH 146
Query: 100 SQMRTVSIPPDFYSFPFLLR---ACSQ-LCSHSL------AQTIHSQVLKLGFIC----- 144
+ D + L+ C + LC+ + + + G+
Sbjct: 147 GSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLV 206
Query: 145 ------------DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+ N+++ Y LR A+++FDE+ +R+VVS T+IDGY K+GD
Sbjct: 207 EARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGD 266
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+A AR +F+ P RD V+W L++GY Q+ Q EA+++F M ++KPD +VS +SA
Sbjct: 267 MASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSA 326
Query: 253 CARLGELEQGKNIHRYIELNQIRVD-SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
C+++G LE K + Y+ + I V + + L+D AKCG ++ A ++FE +++L +
Sbjct: 327 CSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLIS 386
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
+ +M+ GL++HG G ++ FSRM+ + PD V L CS AGLVDE F+ M+
Sbjct: 387 YCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMK 446
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ Y + HY CM DLLGRAG ++EA E++K MP+ W LLG C++H ++E+
Sbjct: 447 TDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELG 506
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
E A+ + +L+P++ G Y +L+++YA A++W DV +R + I+K GCS I
Sbjct: 507 EVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 256/457 (56%), Gaps = 38/457 (8%)
Query: 35 HILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN 94
++L + LY TT + +A L A +F + + + + ++I + P
Sbjct: 108 YMLHSDLYIETTLLNMYAACGD----LKSARFLFERMGHRNKVVWTSMISGYMKNHCPNE 163
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGF-ICDVFVLNSLM 153
A++L+ +M PD + L+ AC++L + +HS + ++ IC V
Sbjct: 164 ALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVL------ 217
Query: 154 HVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
+ L++ Y K GDL ARQ+FD++ +D +W
Sbjct: 218 --------------------------GSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSA 251
Query: 214 LVAGYAQSDQCEEAIQLFCNMMD-LDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
L+ GY ++++ EA+QLF + +++P+ + +++ +SACA+LG+LE G+ +H YI
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
Q L+ L+D ++KCG I+ A IF+S K+L +WN+M+ GLA+HGLGR +L F
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQF 371
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
M ++PD +T +G L CSHAGLV E +KLF E+E++YGV + +HYGCM DLL R
Sbjct: 372 HLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCR 431
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVL 452
AGL+ EA E I+ MP+ D +W +LG CR++ N+E+ E AA +++L+P + GVY +L
Sbjct: 432 AGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILL 491
Query: 453 ADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+++YA W +V K+R ++ I+K GCS + ++
Sbjct: 492 SNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVID 528
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 202/407 (49%), Gaps = 47/407 (11%)
Query: 48 KPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTV 105
K I+ S + + YA S+F + ++N+++RA + P A+ +++M R+
Sbjct: 15 KLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSR 74
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
++P D ++FP LL+ C+ L + + +H QV+K D+++ +L+++Y L+ A
Sbjct: 75 NVP-DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC- 224
+ LF+ + +R+ V ++I GY+K + C
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMK--------------------------------NHCP 161
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
EA+ L+ M + PD + + + +SACA L +L G +H +I +++ + L + L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPD 343
V+ YAKCG + TA ++F+ +K+++ W+A++ G + +L F + + ++P+
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
VTIL + C+ G ++ R + D + + G S L + + D+ + G I+ A +
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN--SLIDMFSKCGDIDAAKRI 339
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE-HVMK---LKPED 445
M D+ W+ ++ G +HG EA A+ H+M+ L+P++
Sbjct: 340 FDSMSY-KDLISWNSMVNGLALHGLGR--EALAQFHLMQTTDLQPDE 383
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 111/252 (44%), Gaps = 17/252 (6%)
Query: 179 SCNTLIDGYVKAGDLA--HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
S N LI + G L +A +F D ++W +++ + S+ A+Q + M++
Sbjct: 12 SLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71
Query: 237 LDIK-PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
PD S L CA L E + GK +H + + D ++ T L++ YA CG +
Sbjct: 72 RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
+A +FE +N W +M+ G + +L+ + +M E PD VT+ + C+
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGC------MADLLGRAGLIEEALEMIKKMPMG 409
+ KL + +E+ C + ++ + G ++ A ++ ++
Sbjct: 192 ELKDLGVGMKLHSHI-------REMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLS-D 243
Query: 410 GDVFVWSGLLGG 421
DV+ WS L+ G
Sbjct: 244 KDVYAWSALIFG 255
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 247/432 (57%), Gaps = 4/432 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P + +N ++R + AV L +M + PD + L A
Sbjct: 97 LEAARKVFDEMPQRAVVVWNMMLRCYVRCGRNTEAVALAEEMERGRLTPDRVTLLTALTA 156
Query: 121 CSQLCSHSLAQTIHSQVLKL-GFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
CS+ SL + IH+ + + GF + V N+L+ +Y L +A LF+++ R+VVS
Sbjct: 157 CSRAGDLSLGRKIHAYMDGVTGF--SLPVANALLDMYVKNGCLEEAVNLFEKMPSRNVVS 214
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
TL+ GY AG + AR LF + +D + W ++ Y Q EA+ LF +M I
Sbjct: 215 WTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQI 274
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+PD +V+ L+ CA LG L+QG+ IH++ E +++D+ L T L+D YAKCG++ ++E
Sbjct: 275 EPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVE 334
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+FE + ++ W A++ GLA +G +L F M + KPD VT +G L C H GL
Sbjct: 335 VFERMEGRDTKAWTAIICGLATNGQAGRALELFEDMERSEAKPDSVTFIGVLSACCHGGL 394
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF-VWSGL 418
VDE RK F M+ VY + ++HY C+ +LLGRAG ++EA ++IK +P+ D ++ L
Sbjct: 395 VDEGRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLDEAEKLIKSIPINKDAMPLFGAL 454
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
+ C+ GNV+++E + + K + V ++++VYA A RWEDVV++R + +K
Sbjct: 455 ITACKAQGNVKMSERLTKRIGKQGYQIPDVNLLMSNVYATASRWEDVVRVRSKMAHPSVK 514
Query: 479 KNAGCSLIQLNG 490
KNAGCSLI++ G
Sbjct: 515 KNAGCSLIEVKG 526
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 166/385 (43%), Gaps = 77/385 (20%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
N +IR SS + + ++ +R + D +++PF+LRA L + H+ LK
Sbjct: 15 NLLIRTLARRSSHADVMAVYYDLRERGLVADSFTYPFVLRAIGALQISVEGRKAHAATLK 74
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
GF D + +SLM +Y + G L AR++
Sbjct: 75 TGFRWDAYTASSLMDMYTML-------------------------------GRLEAARKV 103
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
FD MP R V W ++ Y + + EA+ L M + PD + L++AL+AC+R G+L
Sbjct: 104 FDEMPQRAVVVWNMMLRCYVRCGRNTEAVALAEEMERGRLTPDRVTLLTALTACSRAGDL 163
Query: 260 EQGKNIHRYIE--------LNQIRVDSFLSTG----------------------LVDFYA 289
G+ IH Y++ + +D ++ G LV YA
Sbjct: 164 SLGRKIHAYMDGVTGFSLPVANALLDMYVKNGCLEEAVNLFEKMPSRNVVSWTTLVSGYA 223
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
G ++ A +F EK+L W AM+ HG +L F M +I+PD T++
Sbjct: 224 FAGQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQIEPDRFTVVT 283
Query: 350 ALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
L C++ G +D+ + + ++++V G + + D+ + G +E+++E+
Sbjct: 284 LLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTA--------LIDMYAKCGHVEKSVEV 335
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHGN 427
++M G D W+ ++ G +G
Sbjct: 336 FERME-GRDTKAWTAIICGLATNGQ 359
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 269/490 (54%), Gaps = 51/490 (10%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K C I ++ +IHAH + L + + +T + + T YA
Sbjct: 66 LKDCPNIVELKKIHAHIVKFSL---------SQSSFLVTKMVDVCNHYGET----EYANL 112
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-----RTVSIPPDFYSFPFLLRAC 121
+F + P+ F YN +IRA+ + A+ ++ QM I PD ++FPF++++C
Sbjct: 113 LFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSC 172
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L + L + +H V K G + V NSL+ +Y V C+
Sbjct: 173 AGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMY---------------------VKCD 211
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAV--SWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+L D A ++F+ M RDA SW +V+GYA+ +A++ F M + I
Sbjct: 212 SLDD----------AHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGI 261
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+PD I+LVS L CA+LG LE GK IH Y + + + L++ YAKCG I+
Sbjct: 262 EPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRR 321
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ +E+++ +W+ M+VGLA HG R ++ F M +A+I+P +T +G L C+HAGL
Sbjct: 322 LFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGL 381
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
++E + F+ M+ Y + ++HYGC+ +LLG +G +++ALE++KKMP D +W LL
Sbjct: 382 LNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLL 441
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR HGN++IA A EH+++L+P D G Y +L+++YA+ +W+ V ++R+ + + +KK
Sbjct: 442 SSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKK 501
Query: 480 NAGCSLIQLN 489
GCS I+++
Sbjct: 502 TPGCSSIEVD 511
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 249/437 (56%), Gaps = 7/437 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA S+F+ + S S+N++I + A+ +F +M + PD + ++ A
Sbjct: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261
Query: 121 CSQLCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C+ + + Q IH++V+K F D+ + N+L+ +Y +R+ +A+ +FD + R VVS
Sbjct: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+++ GY KA + AR +F M +D ++W L+AG Q+ + EEA+ LF + +
Sbjct: 322 ETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV 381
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV------DSFLSTGLVDFYAKCGY 293
P + + L+ACA L +L+ G+ H ++ + R D F+ L+D Y KCG
Sbjct: 382 WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGS 441
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ +F+ EK+ +WNAM+VG A +G G +L F +M+E+ PD VT++G L
Sbjct: 442 VENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCA 501
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSHAGL+DE R F M + +G+ HY CM DLLGRAG +EEA +I++M M D
Sbjct: 502 CSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAI 561
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LL C++H N+++ E + ++++ PE+ G Y +L+++YA W++VV++R+ +
Sbjct: 562 VWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMR 621
Query: 474 AGKIKKNAGCSLIQLNG 490
+ K GCS I++ G
Sbjct: 622 QRGVVKQPGCSWIEIQG 638
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 161/352 (45%), Gaps = 30/352 (8%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D F LL C++ S +H+ ++K F + F+ N L+ VY + A++LF
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
D +L R++ S N++I + K+G L A +F++MP D SW ++++G+ Q + +EA+
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
F M + + SALSACA L +L+ G IH + + D ++ + LVD Y+
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG + A +F+ ++ +WN+++ +G +L F MI+ ++PD VT+
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP-- 407
+ C+ + E +++ + +L + D+ + I EA + MP
Sbjct: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
Query: 408 ----------------------------MGGDVFVWSGLLGGCRIHGNVEIA 431
M DV W+ L+ GC +G E A
Sbjct: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEA 369
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 151/317 (47%), Gaps = 38/317 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A+ IF +P S+N++I A+V F+QM + YSF L A
Sbjct: 101 LDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSA 160
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L L IHS V + ++ DV++ ++L+ +Y R+ AQ +FDE+ R VS
Sbjct: 161 CAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSW 220
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI Y + G + +EA+++F M+ ++
Sbjct: 221 NSLITCYEQNGPV-------------------------------DEALKIFVEMIKCGVE 249
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + L S +SACA + +++G+ IH R ++ ++ R D L L+D YAKC IN A
Sbjct: 250 PDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARI 309
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF+ +++ + +M+ G A +++ FS M + D +T + GC+ G
Sbjct: 310 IFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNM----MVKDVITWNALIAGCTQNGE 365
Query: 360 VDEARKLFD--EMESVY 374
+EA LF + ESV+
Sbjct: 366 NEEALILFRLLKRESVW 382
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 272/561 (48%), Gaps = 92/561 (16%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N+ +++C +IKQ+ QIHA LT + H + LY I K +
Sbjct: 35 FNSLLQQCLSIKQLKQIHAQLLTNSI------HKPNSFLYKIADLKD-----------FA 77
Query: 63 YALSIFNNIPYPSTFSYNTIIRA-HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA F+NI P+ +S+N +IR T ++ A+ +S+M+ + + P+ ++PFL AC
Sbjct: 78 YASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIAC 137
Query: 122 SQL-----------------------CSHSLAQTIHSQVLKLGFICDVF---------VL 149
S L SHSL T++++ K+G VF
Sbjct: 138 SNLLAVENGRMGHCSVIRRGLDEDGHVSHSLI-TMYARCGKMGDARKVFDEISQKDLVSW 196
Query: 150 NSLMHVYCVFHRLRDAQELF----------------------------------DEILYR 175
NS++ Y +A LF +E +
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE 256
Query: 176 DVVSCN-----TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
+ ++ N LI Y K GDL AR++FD M +D V+W ++ GYAQ+ EEAI+L
Sbjct: 257 NKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKL 316
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
F +M PD I L+ LSACA +G L+ GK + Y + D ++ T LVD YAK
Sbjct: 317 FQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAK 376
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTIL 348
CG ++ A +F KN +WNAM+ LA HG + +L F M+ + P+ +T +
Sbjct: 377 CGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFV 436
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L C HAGLVDE R+LF M S +G+ +++HY CM DL RAG +EEA + + MP
Sbjct: 437 GVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPE 496
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D + LLG C+ N++I+E + +++L+P + G Y + + +YAN RW+D ++
Sbjct: 497 KPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARM 556
Query: 469 RRSLDAGKIKKNAGCSLIQLN 489
R + + K GCS I +N
Sbjct: 557 RMLMKQKGVSKTPGCSWIDIN 577
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 268/506 (52%), Gaps = 57/506 (11%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA----ITTFKPISSASSPTTDPLSY- 63
+ KT K+ QIH H L G H +YA + + + SS D +SY
Sbjct: 87 KSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSS-HRDVVSYT 145
Query: 64 --------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP 109
A +F+ IP S+N +I + + A+ LF +M ++ P
Sbjct: 146 ALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKP 205
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D + ++ AC+Q S L + +HS + GF ++ ++N+L
Sbjct: 206 DESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNAL----------------- 248
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
ID Y K G++ A +L + + +D +SW TL+ GY + +EA+
Sbjct: 249 --------------IDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALL 294
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVD--SFLSTGLV 285
LF M+ P+++ ++S L ACA LG ++ G+ IH YI+ L + V S L T L+
Sbjct: 295 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLI 354
Query: 286 DFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
D YAKCG I+ A ++ +SS ++L TWNAM+ G AMHG + FSRM + I+PD
Sbjct: 355 DMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDD 414
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
+T +G L CSH+G++D R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI
Sbjct: 415 ITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMIN 474
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
MPM D +W LL C+IHGN+E+ E+ A+ ++K++PE+ G Y +L+++YA A +W +
Sbjct: 475 TMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNE 534
Query: 465 VVKIRRSL-DAGKIKKNAGCSLIQLN 489
V KIR L D G KK GCS I+++
Sbjct: 535 VXKIRTLLNDKGMKKKVPGCSSIEID 560
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 213/380 (56%), Gaps = 3/380 (0%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
SP D L YA+S+F IP P+ +N + R H L S P++A+ L+ M ++ + P+F++F
Sbjct: 19 SPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTF 78
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
PFLL++C++ + Q IH VLKLGF D++V SL+ +Y RL DAQ++FD +
Sbjct: 79 PFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSH 138
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS LI GY G + A+++FD +P +D VSW +++GYA++ ++A++LF M
Sbjct: 139 RDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEM 198
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
M ++KPD + + +SACA+ G +E G+ +H +I + + + L+D Y+KCG +
Sbjct: 199 MKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEV 258
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
TA E+ E K++ +WN ++ G L + +L+ F M+ + P+ VT+L L C
Sbjct: 259 ETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 318
Query: 355 SHAGLVDEARKL---FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
+H G +D R + D+ V+ + D+ + G I+ A ++
Sbjct: 319 AHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRS 378
Query: 412 VFVWSGLLGGCRIHGNVEIA 431
+ W+ ++ G +HG A
Sbjct: 379 LSTWNAMIFGFAMHGRANAA 398
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/478 (33%), Positives = 257/478 (53%), Gaps = 45/478 (9%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
K + Q+HA F G+ + LYA++ + L A ++F+
Sbjct: 61 KALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVS-------------NSLLNARNLFDK 107
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
IP + F +N +IR + NA++L+ +M + PD ++ PF+L+ACS L +
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
++IH V+K G+ D+FV LID Y K
Sbjct: 168 RSIHEYVIKSGWERDLFV-------------------------------GAALIDMYAKC 196
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G + A ++FD++ RDAV W +++A YAQ+ +E+I L M ++P LV+ +
Sbjct: 197 GCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVI 256
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
S+ A + L G+ IH + + + + + T L+D YAKCG + A+ +FE +EK +
Sbjct: 257 SSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVV 316
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+WNA++ G AMHGL +L F +M +PD +T +G L CS L+DE R L++ M
Sbjct: 317 SWNAIITGYAMHGLAVGALDLFDKM-RKEDRPDHITFVGVLAACSRGRLLDEGRALYNLM 375
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
YG++ ++HY CM DLLG G ++EA ++I+ M + D VW LL C+IHGNVE+
Sbjct: 376 VRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVEL 435
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
AE A E +++L+P+D G Y +LA++YA + +WE V K+R+ + +IKKN CS I++
Sbjct: 436 AELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEV 493
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 172/410 (41%), Gaps = 55/410 (13%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IFN P+ +F H+L + +V F P Y + LL++C +
Sbjct: 15 IFNLFPFSQSFY-------HSLATHQTASVDSFPPQ-----PTTHYGYTSLLQSCIDSKA 62
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ + +H+Q LG + + L+H+Y V + L +A+ LFD+I +++ N LI G
Sbjct: 63 LNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRG 122
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y G P + AI L+ M+D ++PDN L
Sbjct: 123 YAWNG------------PH-------------------DNAIILYHKMLDYGLRPDNFTL 151
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
L AC+ L + +G++IH Y+ + D F+ L+D YAKCG + A +F+
Sbjct: 152 PFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVV 211
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ WN+ML A +G S+ M ++P T++ + + + R++
Sbjct: 212 RDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREI 271
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+G K + D+ + G ++ AL + +++ V W+ ++ G +HG
Sbjct: 272 HG-FGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERL-REKRVVSWNAIITGYAMHG 329
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
+A A + K++ ED + V A R R LD G+
Sbjct: 330 ---LAVGALDLFDKMRKEDRPDHITFVGVLAACSR-------GRLLDEGR 369
>gi|413920848|gb|AFW60780.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 478
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 265/495 (53%), Gaps = 47/495 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L+ RC T + ++HA L G L + +L A P DP
Sbjct: 20 NLSLLADRCATPCALARVHAAMLVSGRL-AEDAFAASRLLDAYVALSP---------DPA 69
Query: 62 SYALSIFNNIP-YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLR 119
+ AL++ +++P P++F +NT +R P A FS++ T ++ P ++FPFLL+
Sbjct: 70 AAALALLSSLPCAPNSFMFNTTLRVLASSPDPATAFPFFSRIHGTGALVPGRHTFPFLLK 129
Query: 120 ACSQL-CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A ++L S + + +H+ ++ G D +V N L+ Y V
Sbjct: 130 AAARLPLSLPVTEQLHALAVRHGVHLDAYVANGLVRAYSV-------------------- 169
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
AG L AR++FD +P R+A + T+V+ YAQ+ + E+A+ F M+ +
Sbjct: 170 -----------AGLLRPARRVFDEVPERNAAVYTTMVSAYAQNGRHEDAMAAFVQMVRVG 218
Query: 239 IKPDNIALVSALSACARL--GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+P AL S LSACAR G LE G+++H + + V L T LVD Y K G I
Sbjct: 219 FEPCGAALASVLSACARSPSGGLEMGRHVHDLMVARGVAVGPILGTALVDMYVKNGAIEE 278
Query: 297 AIEIFESSQEKNL-FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+ +F+ E+ + WN ++ GLA G G +L +F RM + P+ T++GAL CS
Sbjct: 279 ALAVFDGLPERRVPAAWNPLISGLANLGHGERALDFFRRMQREGVPPNATTLVGALSACS 338
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GL+DEAR+LF ME +G+ ++HYGCM DLLGRAGL+ EA +MI++M D +W
Sbjct: 339 HPGLLDEARRLFRSMEKDFGIVPGIQHYGCMVDLLGRAGLLSEAEDMIREMSCKADTVIW 398
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL C+ HG +EIAE AA ++KL P + GVY VL+++YA A RW+DV K+R+ +
Sbjct: 399 GALLTACKNHGVIEIAERAAVEMLKLNPSNHGVYVVLSNLYAEAGRWQDVDKLRKVMKGA 458
Query: 476 KIKKNAGCSLIQLNG 490
++ K G S + +G
Sbjct: 459 RLSKIPGASAVNGDG 473
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 218/339 (64%), Gaps = 3/339 (0%)
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+YC L A+++FDE+ +++V+ +++ GYV G+L AR+LF+R P +D V W +
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI 274
+ GY Q + +EA+ LF M +KPD LV+ L+ CA++G LEQG IH YI+ I
Sbjct: 61 INGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGI 120
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
VD+ + T L++ Y+KCG I A+ IF +EK+ TW +++ GLAM+G +L FS+
Sbjct: 121 PVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFSK 180
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M + PD VT +G L CSH GLV+E R+ F+ M S+Y + +L+HYGC+ DLLGRAG
Sbjct: 181 MKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAG 240
Query: 395 LIEEALEMIKKMPMGGD---VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
++EA E+IKK+ + V ++ LL CRI+ NV++ E AE ++K++ D V+ +
Sbjct: 241 QLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSSVHTL 300
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
LA++YA+A RW DV ++RR + +KK GCS I+++G
Sbjct: 301 LANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDG 339
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 32/243 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F P + +I + F+ AV LF +M+ + PD + LL
Sbjct: 39 LDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTG 98
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+Q+ + IH + + G D V S
Sbjct: 99 CAQMGALEQGTWIHGYIDEKGIPVDAVVGTS----------------------------- 129
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
LI+ Y K G + A ++F + +D +W +++ G A + + +A++LF M ++
Sbjct: 130 --LIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFSKMKQVEAI 187
Query: 241 PDNIALVSALSACARLGELEQGKN-IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + + LSAC+ G +E+G+ + + I L+D + G ++ A E
Sbjct: 188 PDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAGQLDEAEE 247
Query: 300 IFE 302
+ +
Sbjct: 248 LIK 250
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 281/574 (48%), Gaps = 109/574 (18%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
++KQ Q+HA L GL L P I + + SAS+ + Y S+ ++
Sbjct: 16 SVKQAKQVHALILIHGLSHLEP----------ILARQILLSASNYSATVAQYVHSVLHHS 65
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P +FS+ IR T A L+ QM+ + P ++ L+AC+++
Sbjct: 66 KSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGL 125
Query: 132 TIHSQVLKLGFICD---VFVLNSLMHVYC----------VFHRLRD-------------- 164
+IH QV K GF ++V +L+ YC +F + +
Sbjct: 126 SIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 185
Query: 165 -------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHA--------------------- 196
AQ +FDEI +DV+S N++I GY +AGD+ A
Sbjct: 186 KSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISG 245
Query: 197 ----------RQLFDRMPFRDAVSWGTLVAGY---------------------------- 218
R FD MP R+ VSW T+++GY
Sbjct: 246 YVEFGDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI 305
Query: 219 ---AQSDQCEEAIQLFCNMM--DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
AQ+ + +EA++LF NM+ D++++PD + L S +SAC++LG+L G I Y+
Sbjct: 306 ACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLG 365
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
I +D L+T L+D YAKCG I+ A E+F ++K+L + AM++G ++G ++ F
Sbjct: 366 IEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFD 425
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
M++A+I P+ +T +G L +HAGLV+E F M+ Y + + HYG M DL GRA
Sbjct: 426 EMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKK-YNLVPSVDHYGIMVDLFGRA 484
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
G ++EALE+IK MPM VW LL CR+H NVE E AA+H +L+P+ G +L+
Sbjct: 485 GRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLS 544
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
++YA+ +RW+DV ++R+ K GCS ++
Sbjct: 545 NIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578
>gi|218193370|gb|EEC75797.1| hypothetical protein OsI_12731 [Oryza sativa Indica Group]
Length = 523
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 251/485 (51%), Gaps = 15/485 (3%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C ++ + Q+HA + GL P I + ++ + D +YA +
Sbjct: 44 QCASMAHLRQLHAALVKSGLA-RDP----------IAASRAVAFCAGDGRD-AAYAARLV 91
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ P P+ F +NT IRA P AV LF M PP+ +FP L A ++L
Sbjct: 92 RHHPRPNAFMWNTAIRALADGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAYARLGRAG 151
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H V+KLG D +V NS++ +Y +A L D V+CN+ I
Sbjct: 152 DGAGLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALA 211
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+AG + AR +FD MP R +W +V+ Y++ +C +A++LF M ++P+ LVS
Sbjct: 212 RAGRVDEARAVFDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVS 271
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L CA LG LEQG +H YI+ + + +++ + T LVD Y KCG I A E+F++S+ +
Sbjct: 272 VLGCCASLGALEQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRG 331
Query: 309 ---LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
L +WN+M++G A+HG R + FS + ++PD VT + L+ H+G+ DEA+
Sbjct: 332 QAKLSSWNSMMLGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKA 391
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+ M S +GV ++HYGC+ D L RAG + EA +I MP+ D VW LL GCR+H
Sbjct: 392 VLASMASEHGVVPGVEHYGCLVDALARAGRLREAEGVIAAMPVAPDAAVWGALLSGCRLH 451
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+ E A AA ++ P D G Y + A A +R + + K GCS+
Sbjct: 452 GDAEAAARAAREAVRCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGKVPGCSM 511
Query: 486 IQLNG 490
I+++G
Sbjct: 512 IEVDG 516
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 273/491 (55%), Gaps = 21/491 (4%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+R T + + Q HA GL S +L +L A+ ++ SY LS+
Sbjct: 33 RRAATGRHVQQAHARLAVLGLATAS---VLPHLLAALPRLPHPPPPDEASSS--SYPLSL 87
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS----- 122
F + S F+ N ++R + PL + LF + ++ +SF FLL + S
Sbjct: 88 FRHSASASAFASNHLLR---VLPHPL-PLRLFPNLPRRNL----HSFTFLLASISNHLDA 139
Query: 123 --QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVS 179
S L +H+ +K G D++V N+L H Y V + + +FDE+ RDVV+
Sbjct: 140 TDHRASSFLGSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRDVVT 199
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N ++ GYV+AG + AR++F+ MP RD VSW TLV GY + + + A+ +F +M++ +
Sbjct: 200 WNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGV 259
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ + A+V+ALSA A++G LE G+ +H ++ + V + LVD ++KCG + A E
Sbjct: 260 RVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVARE 319
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ +++F WNAM+ GLA HGLG+ ++ F R ++ + P +T +G L CS GL
Sbjct: 320 VFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGL 379
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V E R+ F M Y + E++HYGCM DLLGRAGL+ EA+E+I+ M + D +W +L
Sbjct: 380 VAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVL 439
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C+ H V++ +++L+P G Y +LA +YA A +W++V ++R+ + + K
Sbjct: 440 SACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGK 499
Query: 480 NAGCSLIQLNG 490
+AG SL++ G
Sbjct: 500 SAGWSLMEAQG 510
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 268/496 (54%), Gaps = 55/496 (11%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA-ITTFKPISSASSPTTDPLSYAL 65
+ CK + Q+ QIHA L L P H T LY+ I F + L+YA
Sbjct: 29 LNECKDMSQLKQIHALSLRSTL----PNHSTTLFLYSRILHFSSLHD--------LNYAY 76
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSS---PLNAVVLFSQMRTVSIP-PDFYSFPFLLRAC 121
+F+ + P++F +N +IRA S A++L++ M S P PD ++FPF+L+AC
Sbjct: 77 RVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKAC 136
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L + + H+ +LKLGF DV++ NSL+H Y SC
Sbjct: 137 AYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFY---------------------ASC- 174
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
G L A+ +FD+MP R VSW ++ + + E A+QLF +P
Sbjct: 175 ---------GSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEP 225
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELN----QIRVDSFLSTGLVDFYAKCGYINTA 297
D + S ++ACA L L G H ++ N R ++ L+D Y KCG ++ A
Sbjct: 226 DGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIA 285
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSH 356
+IFE Q+ ++ +WN+M++G AMHG G L+L F RMI +R P+ +T +G L C+H
Sbjct: 286 TQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNH 345
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+V+E RK FD M + Y + +L+HYGC+ D+L RAGLI+EALE++ MPM DV +W
Sbjct: 346 RYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWR 405
Query: 417 GLLGG-CRIHGNVEIAEAAAEHVMKLKPED-GGVYKVLADVYANADRWEDVVKIRRSLDA 474
LL C+ + +VE++E A +++ + D GVY +L+ VYA+A RW DV +R+ +
Sbjct: 406 SLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTN 465
Query: 475 GKIKKNAGCSLIQLNG 490
I K GCSLI+++G
Sbjct: 466 NGILKEPGCSLIEVDG 481
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 255/508 (50%), Gaps = 54/508 (10%)
Query: 6 FIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAIT---TFKPISSASSPTTD 59
K C K H Q+HAH L L F H +YA F + S D
Sbjct: 137 LFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRD 196
Query: 60 PLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT 104
+S+ A +F+ IP S+N +I + A+V F +M+
Sbjct: 197 AVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQE 256
Query: 105 VSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRD 164
++ P+ + +L AC S L + I S V GF ++ + N+L
Sbjct: 257 ANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNAL------------ 304
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
ID Y K G+ AR+LFD + +D +SW T++ GY+
Sbjct: 305 -------------------IDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLY 345
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN-QIRVDSFLSTG 283
EEA+ LF M+ ++KP+++ + L ACA LG L+ GK +H YI+ N + ++ L T
Sbjct: 346 EEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTS 405
Query: 284 LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKP 342
L+D YAKCG I A +F S +NL +WNAML G AMHG +L FS M+ + +P
Sbjct: 406 LIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRP 465
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
D +T +G L C+ AGLVD + F M YG+S +L+HYGCM DLL RA EEA +
Sbjct: 466 DDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL 525
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRW 462
+K M M D +W LL C+ HG VE E AE + +L+PE+ G + +L+++YA A RW
Sbjct: 526 MKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRW 585
Query: 463 EDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+DV +IR L+ +KK GC+ I+++G
Sbjct: 586 DDVARIRTRLNDKGMKKVPGCTSIEIDG 613
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 237/447 (53%), Gaps = 18/447 (4%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
N +++CK I QIH+ + GL + + + +++ A SP+ D LSYA
Sbjct: 33 NLLEKCKNINTFKQIHSLIIKTGLN--NTVFVQSKLIHFC--------AVSPSGD-LSYA 81
Query: 65 LSIFNNIPYP---STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
LS+F + F +N++IR ++L SSPL+++ LFS+M + P+ ++FPFL ++C
Sbjct: 82 LSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSC 141
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
++ + + +H+ LKL + V S++H+Y + A+ +FD+ RD VS
Sbjct: 142 TKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFT 201
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
LI GYV G L AR+LFD +P +D VSW +++GY QS + EEAI F M + ++ P
Sbjct: 202 ALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLP 261
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ +V LSAC E GK I ++ N + L+ L+D Y KCG + A E+F
Sbjct: 262 NKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELF 321
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ +EK++ +WN M+ G + L +L F M+ + +KP+ VT LG L C+ G +D
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALD 381
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ + ++ S + + D+ + G IE A + + M ++ W+ +L G
Sbjct: 382 LGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSM-HSRNLASWNAMLSG 440
Query: 422 CRIHGNVEIAEAA-AEHVMK--LKPED 445
+HG+ E A A +E V K +P+D
Sbjct: 441 FAMHGHAERALALFSEMVNKGLFRPDD 467
>gi|388518129|gb|AFK47126.1| unknown [Medicago truncatula]
Length = 447
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 234/409 (57%), Gaps = 35/409 (8%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P++F++N IIR++T SP NA+ ++ M + PD Y+ P +L+A SQ + L Q +
Sbjct: 60 PASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQV 119
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
HS +KLG + + + +++YC KAGD
Sbjct: 120 HSYGIKLGLQSNEYCESGFINLYC-------------------------------KAGDF 148
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A ++FD SW L++G +Q +AI +F +M +PD I +VS + AC
Sbjct: 149 DSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMCAC 208
Query: 254 ARLGELEQGKNIHRYI---ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
+G+L +H+Y+ + N+ V +S L+D Y KCG ++ A E+F + +++N+
Sbjct: 209 GSIGDLYLALQLHKYVFQAKTNEWTV-ILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVS 267
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W +M+VG AMHG + +L F M E+ +KP+ VT +G L C H G V E R FD M
Sbjct: 268 SWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMM 327
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+++YG++ +L+HYGCM DLLGRAGL ++A M+++MPM + VW L+G C HGNV++
Sbjct: 328 KNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDM 387
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
AE AE++ L+P + GVY VL+++YAN W++V +IR + G++ K
Sbjct: 388 AEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAK 436
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 31/262 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ P S+N +I + ++A+V+F M+ PD + ++ AC
Sbjct: 151 AHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMCACGS 210
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ LA +H +V + + + V ++ N+L
Sbjct: 211 IGDLYLALQLHK-----------YVFQAKTNEWTV------------------ILMSNSL 241
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G + A ++F M R+ SW +++ GYA +EA+ F M + +KP+
Sbjct: 242 IDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNY 301
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
+ + LSAC G +++G+ ++ G +VD + G + A + E
Sbjct: 302 VTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVE 361
Query: 303 SSQEK-NLFTWNAMLVGLAMHG 323
K N W ++ HG
Sbjct: 362 EMPMKPNSVVWGCLMGACEKHG 383
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 38/439 (8%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF 111
+AS+P + LSYA SIF+ I +P TF++NTIIRAH S + + S+M + PD
Sbjct: 31 AASAPAS--LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLF-SKMTMAGVSPDH 87
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
++FPF+L+AC++L +HS + KLGF DV+V N L+H Y
Sbjct: 88 FTFPFVLKACARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFY--------------- 129
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
C +D +KA F+ MP RD VSW +++A +A++ EA+ LF
Sbjct: 130 -------GCCGFLDFALKA---------FEEMPERDLVSWSSMIACFAKNGFGYEALALF 173
Query: 232 CNMMDL-DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
M + +KPD + ++S +SA + LG+LE GK I +I N + L T LVD +++
Sbjct: 174 QRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSR 233
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
CG I ++ +F+ E+N+ TW A++ GLA+HG +L F M +PD VT G
Sbjct: 234 CGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGV 293
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
LV CSH GLV E +F+ + + YG+ +HYGCM DLLGRAGL+ EA + + MP+
Sbjct: 294 LVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRP 353
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR 470
+ +W LLG C H +E+AE E + +L G Y +L++VY RW + +R
Sbjct: 354 NSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRN 413
Query: 471 SLDAGKIKKNAGCSLIQLN 489
S+ +I K GCSLI +N
Sbjct: 414 SMREKRISKKPGCSLINVN 432
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 247/433 (57%), Gaps = 10/433 (2%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + + ++N++I + A+ +F +M + PD + ++ AC+
Sbjct: 201 AEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACAS 260
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVL-NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
LC+ IH++V+K D VL N+L+ +Y ++ +A+ +FD + R+VVS +
Sbjct: 261 LCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETS 320
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY +A + AR +F +M R+ VSW L+AGY Q+ + EEA++LF + I P
Sbjct: 321 MVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPT 380
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQ-------IRVDSFLSTGLVDFYAKCGYIN 295
+ + LSACA L +L G+ H ++ L Q D F+ L+D Y KCG I
Sbjct: 381 HYTFGNLLSACANLADLLLGRQAHTHV-LKQGFEFQSGAESDIFVGNSLIDMYMKCGSIE 439
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
+FE +E++ +WNA++VG A +G G +L F +M+ KPD VT++G L CS
Sbjct: 440 DGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACS 499
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAGLV+E R F ME +G+ HY CM DLLGRAG + EA +I+ MP+ D VW
Sbjct: 500 HAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVW 558
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL C++HGN+E+ + AAE ++++ P + G Y +L+++YA RW DVV++R+ +
Sbjct: 559 GSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQ 618
Query: 476 KIKKNAGCSLIQL 488
+ K GCS I++
Sbjct: 619 GVTKQPGCSWIEV 631
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 175/359 (48%), Gaps = 42/359 (11%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
P+ F LL +C + S + +H+++L F ++F+ N L+ VY L DA++L
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
FD + R+ + N+LI K+G L A +LF MP D SW ++V+G+AQ D+ EE++
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
+ F M D + + SALSACA L +L G +H + ++ D ++ + L+D Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+KCG + A E+F E+NL TWN+++ +G +L F RM+++ ++PD VT+
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252
Query: 349 GALVGCS-----------HAGL-------------------------VDEARKLFDEMES 372
+ C+ HA + V+EAR++FD M S
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM-S 311
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ V E M RA ++ A M KM +V W+ L+ G +G E A
Sbjct: 312 IRNVVSETS----MVSGYARAASVKAARFMFSKMTQ-RNVVSWNALIAGYTQNGENEEA 365
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 190/423 (44%), Gaps = 51/423 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F ++P P S+N+++ ++ F +M + YSF L A
Sbjct: 97 LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSA 156
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L ++ +H+ V K + DV++ ++L+ +Y + A+E+F ++ R++V+
Sbjct: 157 CAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTW 216
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI Y + G + EA+++F MMD ++
Sbjct: 217 NSLITCYEQNGPAS-------------------------------EALEVFVRMMDSGLE 245
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + L S +SACA L L++G IH R ++ N+ R D L LVD YAKC +N A
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ +N+ + +M+ G A + + FS+M + + V+ + G + G
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV----VSWNALIAGYTQNGE 361
Query: 360 VDEARKLFD--EMESV----YGVSKELKHYGCMAD-LLGRAG---LIEEALEMIKKMPMG 409
+EA +LF + ES+ Y L +AD LLGR ++++ E +
Sbjct: 362 NEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEF--QSGAE 419
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
D+FV + L+ G++E E K+K D + + YA + ++I
Sbjct: 420 SDIFVGNSLIDMYMKCGSIEDGSRVFE---KMKERDCVSWNAIIVGYAQNGYGAEALQIF 476
Query: 470 RSL 472
R +
Sbjct: 477 RKM 479
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 270/515 (52%), Gaps = 49/515 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
IK ++++H+ + L + P AI + S+ + + S+ N+
Sbjct: 51 IKTLNKLHSKIVINEHLRIDPT-------LAIKLMRAYSAQGETSVARYIFDRSLEKNVV 103
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+ +N +IR++ + + A+ +F M + + PD Y+FP +L+ACS L + +
Sbjct: 104 F-----FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG- 191
+H ++K+G ++F+ N+L+ +Y LR+A+++ D++ YRDVVS N+++ GY ++G
Sbjct: 159 VHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218
Query: 192 ------------------------------------DLAHARQLFDRMPFRDAVSWGTLV 215
++ + +F+RM ++ +SW ++
Sbjct: 219 FDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI 278
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
A Y + EA+ LF M + +KPD + + S L AC L L G+ +H+YIE +R
Sbjct: 279 AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLR 338
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L L+D YAKCG + A ++F+ + +++ +W +M+ G G ++ F++M
Sbjct: 339 PNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKM 398
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
+++ PD + + L CSH GL+D+ R F M YG+ ++H+ CM DL GRAG
Sbjct: 399 LDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGE 458
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+EEA IK+MPM + VW LL CR+H ++I AA+ + +L P+ G Y +L+++
Sbjct: 459 VEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNI 518
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
YA A W+DV+ +R ++ IKK G S ++LNG
Sbjct: 519 YAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNG 553
>gi|225435933|ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 241/423 (56%), Gaps = 32/423 (7%)
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
++LS+F ++P+ + +S+N II + P ++ LF QMR + PPD ++ P +LRAC+
Sbjct: 62 HSLSVFLHMPHRNIYSWNIIIGEFSRSHLPHKSIDLFLQMRHFNQPPDVFTLPLVLRACA 121
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
S L ++H +++G +FV ++L+ +Y F ++ DA
Sbjct: 122 ASGSVKLGVSVHGLCVEMGMEKSLFVASALVFMYVTFGKVLDA----------------- 164
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
R LFD MP RDAV W ++AGYAQ ++ A+ +F M+ + D
Sbjct: 165 --------------RVLFDEMPERDAVLWTAMLAGYAQHEEPMLALSVFRQMVSAGVALD 210
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ ++S L AC +LG L+ GK++H +I + + L LV FY KC + + +F+
Sbjct: 211 GVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYVKCAALGYSYNLFD 270
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
E+++ +W+++++G + G ++L F RM A +KP+ VT LGAL C+H G+V+
Sbjct: 271 KMPERDVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVTFLGALSACTHTGMVER 330
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
A F+ M+ YGV+ ELKHY CM D LGRAG++E+A I++MP+ D V LLGGC
Sbjct: 331 AHTYFEMMKE-YGVAPELKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAVLGALLGGC 389
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R+HGN E+ E A+ +M L+PE Y +LA++YA A R+ED K+R+ + K+ K G
Sbjct: 390 RVHGNAEVGERVAKKLMGLEPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQRKLSKVPG 449
Query: 483 CSL 485
CS
Sbjct: 450 CSF 452
>gi|449498539|ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 234/430 (54%), Gaps = 32/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A F +IP P F N++IRA + P + L++ M SI P+ Y+FPF+L++
Sbjct: 60 LGSAFLFFTHIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKS 119
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ Q++H+ V+K G D++V N+LM
Sbjct: 120 LADFKDLVGGQSVHTHVVKSGHASDLYVQNTLM--------------------------- 152
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
D Y G + +++FD M D VSW L+ GY S ++A+ +F M +
Sbjct: 153 ----DVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFMLDDALIVFEQMQYAGVD 208
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + +V+AL+ACA G +E G IH +++ + VD L T L+D Y KCG I A+ +
Sbjct: 209 PNRVTIVNALAACASFGAIEMGVWIHEFVKTKRWEVDVVLGTALIDMYGKCGRIKEALAV 268
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F++ +EKN++TWN + GLA G ++ +F RM E ++ D VT++ L CSH+GLV
Sbjct: 269 FQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEADDVTLVAVLSACSHSGLV 328
Query: 361 DEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+ R++F + +G S +KHY CM D+L R G IEEA MI MP +W LL
Sbjct: 329 NSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVMINDMPFEATRSMWGSLL 388
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G R HG++E++E AA +++++PE+GG Y VL+++YA +W +V K+R + +KK
Sbjct: 389 TGSRAHGSLEVSEIAARKLVEMEPENGGYYVVLSNIYAEMGKWSEVEKVREIMKERGLKK 448
Query: 480 NAGCSLIQLN 489
+ G S ++L
Sbjct: 449 DLGSSSVELQ 458
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 253/485 (52%), Gaps = 45/485 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + RC+ + I Q+HAH + G L I +LY K I A
Sbjct: 8 DLLLRCRNVFHIRQVHAHVVANGTL--QDLVIANKLLYTYAQHKAIDDA----------- 54
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
S+F+ + + +++ ++ F ++ + PD Y+ PF++R C
Sbjct: 55 YSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDR 114
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + IH VLK G + D FV C +L+
Sbjct: 115 TDLQIGRVIHDVVLKHGLLSDHFV-------------------------------CASLV 143
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
D Y K + A++LF+RM +D V+W ++ YA + E++ LF M + + PD +
Sbjct: 144 DMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKV 202
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
A+V+ ++ACA+LG + + + + YI N +D L T ++D YAKCG + +A E+F+
Sbjct: 203 AMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRM 262
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+EKN+ +W+AM+ HG G+ ++ F M+ I P+ VT + L CSHAGL++E
Sbjct: 263 KEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGL 322
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F+ M + V ++KHY CM DLLGRAG ++EAL +I+ M + D +WS LLG CRI
Sbjct: 323 RFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRI 382
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H +E+AE AA +++L+P++ G Y +L+++YA A +WE V K R + K+KK G +
Sbjct: 383 HSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWT 442
Query: 485 LIQLN 489
I+++
Sbjct: 443 WIEVD 447
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 238/426 (55%), Gaps = 1/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + S+NTI+ A+ A+ L+ R + + + +SF +L C +
Sbjct: 148 ARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVK 207
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L LA+ +H QVL GF+ ++ + +S++ Y +R A+ LFDE+L +D+ + T+
Sbjct: 208 LKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTI 267
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY K GD+ A +LF +MP ++ VSW L++GYA++ EA+ F MM I P+
Sbjct: 268 VSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQ 327
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE- 302
S L ACA + L+ GK +H Y+ R ++ + + L+D Y+KCG + + +F
Sbjct: 328 YTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHL 387
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
++++ WN M+ LA +G G ++ F+ M+E+ +KPD +T + L CSH+GLV E
Sbjct: 388 MGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQE 447
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ F M +GV + +HY C+ DLLGRAG E + ++ M D VWS LLG C
Sbjct: 448 GLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVC 507
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIH N+E+ AE V++LKP+ Y LA +YA +WE V K+R +D I+K G
Sbjct: 508 RIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERG 567
Query: 483 CSLIQL 488
S I +
Sbjct: 568 ISWIDV 573
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 168/361 (46%), Gaps = 35/361 (9%)
Query: 103 RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHR 161
R V +P F LLR C++ + +H + GF V N L+ +Y R
Sbjct: 56 RGVRLPTGI--FVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGR 113
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
+A+++FD++ R++ S N ++ GY K GD+ +AR+LFDRM +D VSW T+V YA+
Sbjct: 114 DVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQ 173
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
EAI L+ + LD+ + + L C +L EL+ K +H + + + LS
Sbjct: 174 GCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLS 233
Query: 282 TGLVDFYAKCGY-------------------------------INTAIEIFESSQEKNLF 310
+ +VD YAKCG +N+A E+F EKN
Sbjct: 234 SSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPV 293
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W+A++ G A + LG +L YF++M++ I P+ T L C+ + +++ +
Sbjct: 294 SWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYL 353
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
Y + + D+ + G++E + + M DV VW+ ++ +G+ E
Sbjct: 354 IRTYFRCNTIV-VSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEK 412
Query: 431 A 431
A
Sbjct: 413 A 413
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 152/357 (42%), Gaps = 69/357 (19%)
Query: 29 LFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTL 88
+ + H TTI+ + ++SAS +F+ +P + S++ +I +
Sbjct: 256 MLVKDIHAWTTIVSGYAKWGDMNSASE-----------LFHQMPEKNPVSWSALISGYAR 304
Query: 89 FSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFV 148
S A+ F++M I P+ Y+F L AC+ + + + +H +++ F C+ V
Sbjct: 305 NSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIV 364
Query: 149 LNSLMHVY----------CVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
++SL+ +Y CVFH + + Q DVV NT+I
Sbjct: 365 VSSLIDMYSKCGMLEASCCVFHLMGNKQ---------DVVVWNTMI-------------- 401
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+ AQ+ E+A+Q+F +M++ +KPD I + LSAC+ G
Sbjct: 402 -----------------SALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGL 444
Query: 259 LEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCG-YINTAIEIFESSQEKNLFTWNAML 316
+++G + + + + D + L+D + G ++ E+ S + + W+A+L
Sbjct: 445 VQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALL 504
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTI----LGALVGCSHAGLVDEARKLFDE 369
+H L R+IE + + + L A +G + V++ R+L DE
Sbjct: 505 GVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWES--VEKVRELMDE 559
>gi|326504712|dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 658
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/417 (39%), Positives = 228/417 (54%), Gaps = 7/417 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTL---FSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
L A +F IP S+ TII + S L A V + M V + L
Sbjct: 226 LPMAAEVFGRIPERDAVSWLTIIDGYIRADCTSEALRAYV--AMMAEVDTRGNAALLVDL 283
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
++ C++ + Q +H+ +LK GF FV +L+H Y L A+ F +
Sbjct: 284 IKVCARHAAVLEGQQLHTVILKDGFDAHPFVQATLIHFYGSCDLLDIARMQFKLSDKSHI 343
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
S N L+ G + + ARQLFD MP RD +SW TL++GY QS +A+QLF M+
Sbjct: 344 ASWNALMSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGYVQSGHSNKALQLFYLMLGA 403
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++P+++ L S LSA A G LEQG+ IH YI N I++ LS GL+D YAKCG + A
Sbjct: 404 GVEPNDVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDMYAKCGSVADA 463
Query: 298 IEIFESSQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
I++F + K ++ WNA++ LA+HG SL F + IKP+ VT +G L C
Sbjct: 464 IQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQRTNIKPNSVTYIGVLNACC 523
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAGLV E R F+ M YG+ +KHYGCM DLLGRAG +EEA +I+ MPM DV +W
Sbjct: 524 HAGLVTEGRHHFESMSREYGIQPTIKHYGCMVDLLGRAGHLEEAENLIQMMPMRSDVVIW 583
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
+L R HGNV + E AAE + K+ P G L++++A A RW +V +R+ L
Sbjct: 584 GSILAAARTHGNVALGEKAAEELAKIDPNHGASKVALSNIFAEAARWNNVSLVRKEL 640
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 189/408 (46%), Gaps = 42/408 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + +P T SY T++ A +AV +F M +PP+ + +L A
Sbjct: 94 LDLAQGMLAEMPQRDTVSYTTVLTALARAGHAEDAVAVFRGMLAQDVPPNEVTLAGVLTA 153
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ H ++ G + V +L+H Y ++ A+E+F+++ ++ V+
Sbjct: 154 LALERPPVPVGVAHGVTVRRGLNGFLIVATNLVHAYAAASQVCFAREIFEQMPDKNTVTW 213
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDI 239
N +++GY+KAG L A ++F R+P RDAVSW T++ GY ++D EA++ + MM ++D
Sbjct: 214 NAMLNGYLKAGMLPMAAEVFGRIPERDAVSWLTIIDGYIRADCTSEALRAYVAMMAEVDT 273
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ + LV + CAR + +G+ +H I + F+ L+ FY C ++ A
Sbjct: 274 RGNAALLVDLIKVCARHAAVLEGQQLHTVILKDGFDAHPFVQATLIHFYGSCDLLDIARM 333
Query: 300 IFESSQEKNLFTWNAMLVGL----AMH---------------------------GLGRLS 328
F+ S + ++ +WNA++ GL MH G +
Sbjct: 334 QFKLSDKSHIASWNALMSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGYVQSGHSNKA 393
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA- 387
L F M+ A ++P+ VT+ L + +G++++ R + D Y +S ++ ++
Sbjct: 394 LQLFYLMLGAGVEPNDVTLASTLSAVADSGMLEQGRFIHD-----YIISNSIQLTDNLSA 448
Query: 388 ---DLLGRAGLIEEALEMIKKMPMG-GDVFVWSGLLGGCRIHGNVEIA 431
D+ + G + +A+++ + V W+ ++ IHG+ +
Sbjct: 449 GLIDMYAKCGSVADAIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTS 496
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 131 QTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRD---AQELFDEI--LYRDVVSCNTLI 184
+ +H+ K G + + FV NSL+ Y + A+ LFDEI RD + NTL+
Sbjct: 26 EQLHALAAKSGLLASNTFVRNSLLAFYARLPSPQAPALARHLFDEIPLALRDPAAHNTLL 85
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
+AG L A+ + MP RD VS+ T++ A++ E+A+ +F M+ D+ P+ +
Sbjct: 86 ASLARAGRLDLAQGMLAEMPQRDTVSYTTVLTALARAGHAEDAVAVFRGMLAQDVPPNEV 145
Query: 245 ALVSALSACA------RLGELEQGKNIHRYIELNQIRVDSFL--STGLVDFYAKCGYINT 296
L L+A A +G + G + R + + FL +T LV YA +
Sbjct: 146 TLAGVLTALALERPPVPVG-VAHGVTVRRGL-------NGFLIVATNLVHAYAAASQVCF 197
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A EIFE +KN TWNAML G G+ ++ F R+ E D V+ L + G
Sbjct: 198 AREIFEQMPDKNTVTWNAMLNGYLKAGMLPMAAEVFGRIPER----DAVSWLTIIDGYIR 253
Query: 357 AGLVDEARKLFDEM 370
A EA + + M
Sbjct: 254 ADCTSEALRAYVAM 267
>gi|147799976|emb|CAN68263.1| hypothetical protein VITISV_010806 [Vitis vinifera]
Length = 445
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/438 (37%), Positives = 243/438 (55%), Gaps = 48/438 (10%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILT-TILYAITTFKPISSASSPTTDP 60
+L+ + +HQ HAH + GL H T T L A +A SP+
Sbjct: 15 SLSQALTALTATSHLHQAHAHLIVSGL----ASHPFTVTRLLAC-------AALSPSASD 63
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +A +IF + PS F +NTII A S L++V + M PD ++FPFL+++
Sbjct: 64 LPHAKTIFLHTHNPSPFMFNTIIMAS---SRTLDSVTFYVCMLHAGHFPDNFTFPFLIKS 120
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE--------- 171
S + L +H+ V+K G DVFV+N+++ +Y F LR A+++FDE
Sbjct: 121 SSASPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVS 180
Query: 172 -----------------------ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA 208
+ ++ VS N +I GY + + AR+LFD MP RDA
Sbjct: 181 WTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDA 240
Query: 209 VSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHR 267
SW +V+GY+Q C EA+ LF M+ D + P+ ALVSA+SACA+L LE+G+ +H
Sbjct: 241 ASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLXALEEGRWLHS 300
Query: 268 YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRL 327
YI+ ++R++ L T L+D Y KCG I A +F E+N+ +WN+M+ GLA++G G+
Sbjct: 301 YIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKE 360
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
+L F +M P+ +T + L GCSH+GL+ E R LF M VYG+ +LKHYGCM
Sbjct: 361 ALXLFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMV 420
Query: 388 DLLGRAGLIEEALEMIKK 405
DLLGRAGL++EAL+ +++
Sbjct: 421 DLLGRAGLVKEALDFVEE 438
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 173/501 (34%), Positives = 262/501 (52%), Gaps = 50/501 (9%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA-------------ITTFKPISSASS 55
+ KT ++ QIHA + G H +YA ++ + + S ++
Sbjct: 95 KSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTA 154
Query: 56 PTTDPLSY-----ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPD 110
T S A +F+ I S+N +I + A+ LF +M ++ PD
Sbjct: 155 LITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPD 214
Query: 111 FYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
+ +L AC+Q S L + IH+ V D F
Sbjct: 215 EGTLVSVLSACAQSGSIELGREIHTLV--------------------------DDHHGFG 248
Query: 171 EILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
L +V N I Y K GD+ A LF+ + +D VSW TL+ GY + +EA+ L
Sbjct: 249 SSL--KIV--NAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLL 304
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFY 288
F M+ P+++ ++S L ACA LG ++ G+ IH YI+ L + S L T L+D Y
Sbjct: 305 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMY 364
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
AKCG I A ++F S K+L +WNAM+ G AMHG + FSRM + I+PD +T++
Sbjct: 365 AKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLV 424
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L CSH+GL+D R +F + Y ++ +L+HYGCM DLLG AGL +EA E+I MPM
Sbjct: 425 GLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPM 484
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D +W LL C++HGN+E+AE+ A+ +M+++PE+ G Y +L+++YA A RWEDV +I
Sbjct: 485 EPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARI 544
Query: 469 RRSLDAGKIKKNAGCSLIQLN 489
R L+ +KK GCS I+++
Sbjct: 545 REVLNGKGMKKVPGCSSIEID 565
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 206/379 (54%), Gaps = 3/379 (0%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
SP D L YA+S+F P+ +NT++R S ++ + ++ +M + P+ Y+F
Sbjct: 27 SPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTF 86
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
PFLL++C++ + + IH+QV+KLG D + SL+ +Y RL DA+++FD
Sbjct: 87 PFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQ 146
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVSC LI GY GD+ AR++FD + RD VSW ++ GY ++ EEA++LF M
Sbjct: 147 RDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEM 206
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF-LSTGLVDFYAKCGY 293
M +++PD LVS LSACA+ G +E G+ IH ++ + S + + Y+KCG
Sbjct: 207 MRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGD 266
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A +FE K++ +WN ++ G L + +L+ F M+ + P+ VT+L L
Sbjct: 267 VEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 326
Query: 354 CSHAGLVDEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C+H G +D R + ++ + GV+ + D+ + G IE A ++ M M +
Sbjct: 327 CAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSL 385
Query: 413 FVWSGLLGGCRIHGNVEIA 431
W+ ++ G +HG A
Sbjct: 386 SSWNAMIFGFAMHGRANAA 404
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 89/228 (39%), Gaps = 43/228 (18%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN++ + S S+N +I + A LFS+MR I PD + LL ACS
Sbjct: 373 AHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACS- 431
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
HS +L LG + S+ Y + +L +
Sbjct: 432 ----------HSGLLDLG----RHIFKSVTQDYNITPKLEHY---------------GCM 462
Query: 184 IDGYVKAGDLAHARQLFDRMPFR-DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
ID AG A ++ MP D V W +L+ E A +M +I+P+
Sbjct: 463 IDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLM--EIEPE 520
Query: 243 N---IALVSALSAC-------ARLGELEQGKNIHRYIELNQIRVDSFL 280
N L+S + A AR+ E+ GK + + + I +DS +
Sbjct: 521 NSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVV 568
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 238/426 (55%), Gaps = 1/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + S+NTI+ A+ A+ L+ R + + + +SF +L C +
Sbjct: 148 ARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVK 207
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L LA+ +H QVL GF+ ++ + +S++ Y +R A+ LFDE+L +D+ + T+
Sbjct: 208 LKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTI 267
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY K GD+ A +LF +MP ++ VSW L++GYA++ EA+ F MM I P+
Sbjct: 268 VSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQ 327
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE- 302
S L ACA + L+ GK +H Y+ R ++ + + L+D Y+KCG + + +F
Sbjct: 328 YTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHL 387
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
++++ WN M+ LA +G G ++ F+ M+E+ +KPD +T + L CSH+GLV E
Sbjct: 388 MGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQE 447
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ F M +GV + +HY C+ DLLGRAG E + ++ M D VWS LLG C
Sbjct: 448 GLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVC 507
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIH N+E+ AE V++LKP+ Y LA +YA +WE V K+R +D I+K G
Sbjct: 508 RIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERG 567
Query: 483 CSLIQL 488
S I +
Sbjct: 568 ISWIDV 573
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 35/361 (9%)
Query: 103 RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHR 161
R + +P F LLR C++ + +H + GF V N L+ +Y R
Sbjct: 56 RGIRLPTGI--FVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGR 113
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
+A+++FD++ R++ S N ++ GY K GD+ +AR+LFDRM +D VSW T+V YA+
Sbjct: 114 DVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQ 173
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
EAI L+ + LD+ + + L C +L EL+ K +H + + + LS
Sbjct: 174 GCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLS 233
Query: 282 TGLVDFYAKCGY-------------------------------INTAIEIFESSQEKNLF 310
+ +VD Y+KCG +N+A E+F EKN
Sbjct: 234 SSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPV 293
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W+A++ G A + LG +L YF++M++ I P+ T L C+ + +++ +
Sbjct: 294 SWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYL 353
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
Y + + D+ + G++E + + M DV VW+ ++ +G+ E
Sbjct: 354 IRTYFRCNTIV-VSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEK 412
Query: 431 A 431
A
Sbjct: 413 A 413
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 151/357 (42%), Gaps = 69/357 (19%)
Query: 29 LFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTL 88
+ + H TTI+ + ++SAS +F+ +P + S++ +I +
Sbjct: 256 MLVKDIHAWTTIVSGYAKWGDMNSASE-----------LFHQMPEKNPVSWSALISGYAR 304
Query: 89 FSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFV 148
S A+ F++M I P+ Y+F L AC+ + + + +H +++ F C+ V
Sbjct: 305 NSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIV 364
Query: 149 LNSLMHVY----------CVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
++SL+ +Y CVFH + + Q DVV NT+I
Sbjct: 365 VSSLIDMYSKCGMLEASCCVFHLMGNKQ---------DVVVWNTMI-------------- 401
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+ AQ+ E+A+Q+F +M++ +KPD I + LSAC+ G
Sbjct: 402 -----------------SALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGL 444
Query: 259 LEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCG-YINTAIEIFESSQEKNLFTWNAML 316
+++G + + + + D L+D + G ++ E+ S + + W+A+L
Sbjct: 445 VQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALL 504
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTI----LGALVGCSHAGLVDEARKLFDE 369
+H L R+IE + + + L A +G + V++ R+L DE
Sbjct: 505 GVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWES--VEKVRELMDE 559
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 263/485 (54%), Gaps = 14/485 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++R K I Q+ IHA + G H + F+ + S S + YA
Sbjct: 54 SLLQRSKHINQVLPIHAQLIRNG-------HSQDPFM----VFELLRSCSK--CHAIDYA 100
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
IF P+ + Y +I + +A+ L+S+M SI PD Y +L+AC
Sbjct: 101 SRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQ 160
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +HS+ LKLG + V +M +Y L DA+ +F+E + DVV+ +I
Sbjct: 161 LALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEE-MPEDVVASTVMI 219
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y G + A +F R+ +D V W ++ G+ ++++ A++ F M +++P+
Sbjct: 220 SSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEF 279
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V LSAC++LG LE G+ +H Y+ +I ++ F+ L++ Y++CG I+ A +F+
Sbjct: 280 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++++ T+N M+ GL+M+G R ++ F MI R++P VT +G L CSH GLVD
Sbjct: 340 KDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGF 399
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
K+F M YGV +++HYGCM DLLGR G +EEA ++I+ M M D + LL C++
Sbjct: 400 KIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKM 459
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H N+E+ E A+ + D G Y +L+ VYA++ +W++ ++R + ++K GCS
Sbjct: 460 HKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCS 519
Query: 485 LIQLN 489
I++N
Sbjct: 520 SIEVN 524
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 6/231 (2%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
+S R + Q IH + N D F+ L+ +KC I+ A IF+ + N+
Sbjct: 53 ISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNV 112
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+ + A++ G G ++ +SRM+ I PD + L C + E R++
Sbjct: 113 YLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSR 172
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ S L M +L G+ G + +A + ++MP DV + ++ G VE
Sbjct: 173 ALKLGLSSNRLVRLRIM-ELYGKCGELGDARRVFEEMP--EDVVASTVMISSYSDQGLVE 229
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
A A V + +D + + D + + ++ R + ++ N
Sbjct: 230 EAGAVFSRVRR---KDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPN 277
>gi|195614306|gb|ACG28983.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 478
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 265/495 (53%), Gaps = 47/495 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L+ RC T + ++HA L G L + +L A P DP
Sbjct: 20 NLSLLADRCATPCALARVHAAMLVSGRL-AEDAFAASRLLDAYVELSP---------DPA 69
Query: 62 SYALSIFNNIP-YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLR 119
+ AL++ +++P P++F +NT +R P FS++ T ++ P ++FPFLL+
Sbjct: 70 AAALALLSSLPCAPNSFMFNTTLRVLASSPDPATTFPFFSRIHGTGALVPGRHTFPFLLK 129
Query: 120 ACSQL-CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A ++L S + + +H+ ++ G D +V N L+ Y V
Sbjct: 130 AAARLPLSLPVTEQLHALAVRHGVHLDAYVANGLVRAYSV-------------------- 169
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
AG L AR++FD +P R+A + T+V+ YAQ+ + E+A+ F M+ +
Sbjct: 170 -----------AGLLRPARRVFDEVPERNATVYTTMVSAYAQNGRHEDAMAAFVQMVRVG 218
Query: 239 IKPDNIALVSALSACARL--GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+P AL S LSACAR G LE G+++H + + V L T LVD Y K G I
Sbjct: 219 FEPGGAALASVLSACARSPSGGLEMGRHVHDLMVARGVAVGPILGTALVDMYVKNGAIEE 278
Query: 297 AIEIFESSQEKNL-FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+ +F+ E+ + WN ++ GLA G G +L +F RM + P+ T++GAL CS
Sbjct: 279 ALAVFDGLPERRVPAAWNPLISGLANLGHGERALDFFRRMQREGVPPNATTLVGALSACS 338
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GL+DEAR+LF ME+ +G+ ++HYGCM DLLGRAGL+ EA +MI++M D +W
Sbjct: 339 HPGLLDEARRLFRSMENDFGIVPGIQHYGCMVDLLGRAGLLSEAEDMIREMSCKADTVIW 398
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL C+ HG +EIAE AA ++KL P + GVY VL+++YA A RW+DV K+R+ +
Sbjct: 399 GALLTACKNHGVIEIAERAAVEMLKLDPSNHGVYVVLSNLYAEAGRWQDVDKLRKVMKGA 458
Query: 476 KIKKNAGCSLIQLNG 490
++ K G S + +G
Sbjct: 459 RLSKIPGASAVNGDG 473
>gi|108709982|gb|ABF97777.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 523
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 250/485 (51%), Gaps = 15/485 (3%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C ++ + Q+HA + GL P I + ++ + D +YA +
Sbjct: 44 QCASMAHLRQLHAALVKSGLA-RDP----------IAASRAVAFCAGDGRD-AAYAARLV 91
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ P P+ F +NT IRA P AV LF M PP+ +FP L A ++L
Sbjct: 92 RHHPRPNAFMWNTAIRALADGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAYARLGRAG 151
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H V+KLG D +V NS++ +Y +A L D V+CN+ I
Sbjct: 152 DGAGLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALA 211
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+AG + AR +FD MP R +W +V+ Y++ +C +A++LF M ++P+ LVS
Sbjct: 212 RAGRVDEARAVFDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVS 271
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L CA LG LEQG +H YI+ + + +++ + T LVD Y KCG I A E+F++S+ +
Sbjct: 272 VLGCCASLGALEQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRG 331
Query: 309 ---LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
L +WN+M++G A+HG R + FS + ++PD VT + L+ H+G+ DEA+
Sbjct: 332 QAKLSSWNSMMLGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKA 391
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
+ M S +GV ++HYGC+ D L RAG + EA I MP+ D VW LL GCR+H
Sbjct: 392 VLASMASEHGVVPGVEHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGALLSGCRLH 451
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G+ E A AA ++ P D G Y + A A +R + + K GCS+
Sbjct: 452 GDAEAAARAAREAVRCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGKVPGCSM 511
Query: 486 IQLNG 490
I+++G
Sbjct: 512 IEVDG 516
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 265/485 (54%), Gaps = 18/485 (3%)
Query: 14 KQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
+ + +IHAH L G + SP H+ + ++ LSYA + P
Sbjct: 107 RHLREIHAHLLVSGRI-ASPSHLAAFLASLASSSSDDDDDGD-----LSYARLLLPRRP- 159
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ-- 131
+ ++N+++RA P A F R + + PD YSF FL+RA + L + + +
Sbjct: 160 ATLLAHNSLLRALARGRRPHLA---FGAFRDLPLAPDNYSFTFLVRAATALAAAAASALD 216
Query: 132 ------TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
++H+ L+ G D V + + +Y + A+ F EI DVV ++
Sbjct: 217 AALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVG 276
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
G+ AR+LFD MP RD V+W ++AGY + + EA++LF M +
Sbjct: 277 ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT 336
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LVSAL+ACA+LG LE+GK +H +R+ L T L+D Y+KCG + A+E+F+S
Sbjct: 337 LVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 396
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E+N++TW + + GLAM+G+GR L F RM ++P+GVT + L GCS AGLVDE R
Sbjct: 397 ERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRA 456
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
FD M+S +G+ L+HYGCM DL GRAG +++A+ I MP+ VW LL RIH
Sbjct: 457 CFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIH 516
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
NVE+ + A + +M ++ ++ + +L+++YA++ W+ V +R + A +KK GCS
Sbjct: 517 KNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSA 576
Query: 486 IQLNG 490
I++ G
Sbjct: 577 IEVGG 581
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 268/480 (55%), Gaps = 21/480 (4%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTF 77
Q+H H L G F S + +L F + +A +F+
Sbjct: 139 QVHCHVLRNG--FGSDVFVNNALLNFYCGFGDVVNA-----------YKVFDESFVRDCV 185
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
S+NT+I +F +MR V + PD Y+F LL CS L + + + +H V
Sbjct: 186 SFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLV 245
Query: 138 LK-LG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD--VVSCNTLIDGYVKAGDL 193
+ LG F +V ++N L+ +Y RL A+ + + V + +L+ Y G++
Sbjct: 246 YRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEV 305
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
AR+LFD+M RD VSW +++GY+ + +EA++LF + L +KPD +A+V+ALSAC
Sbjct: 306 KVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSAC 365
Query: 254 ARLGELEQGKNIHR-YIELNQI-RVDSFLSTGLVDFYAKCGYINTAIEIFE--SSQEKNL 309
ARLG LE G+ IHR Y N ++ ++ +VD YAKCG I+ A+++F S +K
Sbjct: 366 ARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTT 425
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
F +N+++ GLA HG G + F M +KPD +T + L C H GLVD +KLF+
Sbjct: 426 FLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFES 485
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M +VYGVS E++HYGCM DLLGRAG ++EA +I KMP + +W LL C++HG+V
Sbjct: 486 MFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVA 545
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+A A+ +++L+ + G Y +L+++ ++ D+ ++ +R+++D I+K G S +++N
Sbjct: 546 LARVASYELVELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMN 605
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 224/485 (46%), Gaps = 83/485 (17%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+ + + CKT++Q HQI+AH + G + H+ TT+ TF ASS ++ L
Sbjct: 17 IKSLLSSCKTMQQAHQIYAHIIVTGRH--NNLHLSTTLF----TFY----ASSSSSQSLH 66
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHT-LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
++ ++F I P F +N II+A++ + S P + LF M S+ PD ++FPFLL+AC
Sbjct: 67 HSHTLFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKAC 126
Query: 122 SQ--LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+ + + +H VL+ GF DVFV N+L++ YC F + +A ++FDE RD VS
Sbjct: 127 ANVLISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVS 186
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
NT+I+G+ + GD++ ++F M + +
Sbjct: 187 FNTMINGFARKGDVS-------------------------------GCFRVFGEMRGVCV 215
Query: 240 KPDNIALVSALSACARLGELEQGKNIHR--YIELNQIRVDSFLSTGLVDFYAKCGY---- 293
+PD V+ LS C+ L + G+ +H Y EL + L LVD YAKCG
Sbjct: 216 RPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMA 275
Query: 294 -----------------------------INTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
+ A +F+ E+++ +W AM+ G + G
Sbjct: 276 ETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGC 335
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV-YGVSKELKHY 383
+ +L F ++ +KPD V ++ AL C+ G ++ R++ + + S
Sbjct: 336 FQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFT 395
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGD-VFVWSGLLGGCRIHGNVEIAEAAAEH--VMK 440
+ D+ + G I+ AL++ +K F+++ ++ G HG E A+ E ++
Sbjct: 396 SAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLG 455
Query: 441 LKPED 445
LKP++
Sbjct: 456 LKPDN 460
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 248/431 (57%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + P + S+ ++I ++ P +AV F+ M + + PD + L A
Sbjct: 185 LDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSA 244
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVS 179
CS+L + + +H V K ++ +L+ +Y + AQ +FD + +
Sbjct: 245 CSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEP 304
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N +IDGY K G + AR LFD+M RD +++ +++ GY S + +A+QLF + +
Sbjct: 305 WNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGM 364
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ DN +VS L+ACA LG L QG+ +H IE + D +L T LVD Y KCG ++ A
Sbjct: 365 RADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATA 424
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F E+++ TW+AM+ GLA +G+G +L F +M +P VT + L CSH+ L
Sbjct: 425 VFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSL 484
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
++E R+ F+EM S++ + +++HYGCM DLL R+GL++EA+ +++ MPM + +W+ +L
Sbjct: 485 LNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASIL 544
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H N+++A AAEH++KL PE+ VY L ++Y ++ +W + +IR ++ +KK
Sbjct: 545 SACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKK 604
Query: 480 NAGCSLIQLNG 490
AG S I + G
Sbjct: 605 TAGYSSITVAG 615
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 220/452 (48%), Gaps = 49/452 (10%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPC--HILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
++++Q Q+HA T G + P H+L ++ + S+P L Y LS+F
Sbjct: 10 RSVRQASQLHAILTTSGRIAHRPSAEHLLNSLTNCL---------SAPRH--LRYVLSLF 58
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLN-AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
+ +P+P+TF ++T +RA S+ + V++ +MR + ++F F+ R C+
Sbjct: 59 DRLPHPTTFLHDTALRACLQASAGADHPVLILRRMRRGGVRMSAFTFHFVFRCCAAGAGA 118
Query: 128 SLAQTIHSQVLKLGFICDV-FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L + +H+ L+ V N L+H+Y DA+ FDE+ +D V T+I G
Sbjct: 119 GLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGG 178
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
V+ G L AR+L + P R+ VSW +L+AGY+++ + +A+ F M+ ++PD +A+
Sbjct: 179 LVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAV 238
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--------------- 291
+ ALSAC++L LE G+ +H + +I++ L L+D YAKC
Sbjct: 239 IGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGR 298
Query: 292 -----------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
G+++ A +F+ +++ T+N+M+ G G R +L F +
Sbjct: 299 GQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQ 358
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
+ ++ D T++ L C+ G + + R L +E V +++ + D+ + G
Sbjct: 359 LRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI-VEEDVYLVTALVDMYMKCG 417
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
++EA + +M DV WS ++ G +G
Sbjct: 418 RVDEATAVFHRMG-ERDVHTWSAMIAGLAFNG 448
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 278/484 (57%), Gaps = 21/484 (4%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTIL---YAITTFKPISSASSPTTDPLSYALSI 67
K++K Q H+ L+ GL S +L T L YAI P L +
Sbjct: 37 KSLKLTRQSHSRILSLGL---SQNSLLATKLIFAYAI--------CQHPYHSRL-----V 80
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F+++ + + F +N++I + A LF+QM + + PD ++ L + S+L +
Sbjct: 81 FDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGAL 140
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
++IH + +++GF+ D V NS+M +YC +++++FDE+ R+ S N LI GY
Sbjct: 141 FSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGY 200
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIAL 246
+G+L R++FDRM R+ SW ++ GY ++ +EA+ LF +M +D I+P+ ++L
Sbjct: 201 AVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSL 260
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES-SQ 305
VS L AC+ L G+ IH + ++ + L L+D Y+KCG +++A +FE S
Sbjct: 261 VSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSL 320
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+ +W++M+ G +HG G+ +++ + +M++A I+PD +T +G L CS +GLV+E
Sbjct: 321 CKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLN 380
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
++ + + YG+ L+ + C+ D+LGRAG ++ AL+ IK MP+ VW L+ IH
Sbjct: 381 IYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIH 440
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
G++E+ E A +++L+PE+ Y ++++YA++ RW+ V ++RR + +++K GCS
Sbjct: 441 GDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSW 500
Query: 486 IQLN 489
I +N
Sbjct: 501 ISIN 504
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++AL+ +L L+ + H I + +S L+T L+ YA C + + +F+
Sbjct: 23 SLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFD 82
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
S Q KN+F WN+++ G A + L + F++M + + PD T+ S G +
Sbjct: 83 SLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFS 142
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ + + + VS + M+ + + G EE+ ++ +M + + W+ L+ G
Sbjct: 143 GKSIHGKSIRIGFVSDTVVANSIMS-MYCKCGNFEESRKVFDEMTI-RNSGSWNVLIAGY 200
Query: 423 RIHGNVEIAE 432
+ GN+ +
Sbjct: 201 AVSGNLVVGR 210
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 265/488 (54%), Gaps = 21/488 (4%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSP--CHILTTILYAITTFKPISSASSPTTDPLSY 63
+K + ++ QIH H + G L L + L + F
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNF--------------GV 184
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P+P S+N +I + L A+ L+ +M + I PD Y+ LL C
Sbjct: 185 AEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Query: 124 LCSHSLAQTIHSQVLKLG--FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
L L + +H + + G + ++ + N+L+ +Y A+ FD + +D+ S N
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI-QLFCNMMDLD-I 239
T++ G+V+ GD+ A+ +FD+MP RD VSW +L+ GY++ + + +LF M ++ +
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKV 364
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD + +VS +S A GEL G+ +H + Q++ D+FLS+ L+D Y KCG I A
Sbjct: 365 KPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFM 424
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+++ EK++ W +M+ GLA HG G+ +L F RM E + P+ VT+L L CSH+GL
Sbjct: 425 VFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGL 484
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI-KKMPMGGDVFVWSGL 418
V+E +F+ M+ +G E +HYG + DLL RAG +EEA +++ KKMPM +W +
Sbjct: 485 VEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSI 544
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR ++E AE A ++KL+PE G Y +L+++YA RW K R +++ +K
Sbjct: 545 LSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVK 604
Query: 479 KNAGCSLI 486
K AG S +
Sbjct: 605 KTAGYSSV 612
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 191/468 (40%), Gaps = 96/468 (20%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C + Q Q+ A + L+ C + ++ S+ + P L+ L
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLI----CDT-----FPMSRLIFFSAITYPENLDLAKLL 90
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
N P P+ F YNT+I A + SS L+S M + PD +F +L++A S L
Sbjct: 91 -FLNFTPNPNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFL- 146
Query: 126 SHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S + IH ++ G + ++ NSL+ Y A+++F + + DV S N +I
Sbjct: 147 --SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMI 204
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY K G F EA++L+ M+ I+PD
Sbjct: 205 VGYAKQG--------FSL-----------------------EALKLYFKMVSDGIEPDEY 233
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIEIFE 302
++S L C L ++ GK +H +IE S LS L+D Y KC A F+
Sbjct: 234 TVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFD 293
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM--------------------------- 335
+ ++K++ +WN M+VG G + F +M
Sbjct: 294 AMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRE 353
Query: 336 ------IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG----- 384
I ++KPD VT++ + G ++ G + R V+G+ L+ G
Sbjct: 354 LFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR-------WVHGLVIRLQLKGDAFLS 406
Query: 385 -CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ D+ + G+IE A M+ K DV +W+ ++ G HGN + A
Sbjct: 407 SALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 146/330 (44%), Gaps = 47/330 (14%)
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
LL C+ S + + + +Q+++ ICD F ++ L+ F I Y +
Sbjct: 40 LLENCN---SRNQFKQVLAQIMRFNLICDTFPMSRLI--------------FFSAITYPE 82
Query: 177 VVSCNTLIDGYVKAGDLAHARQLF-DRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
+L A+ LF + P + + T+++ + S E L+ +M+
Sbjct: 83 ---------------NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMI 125
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYI 294
+ PD + + A + L E++Q IH +I ++ + + ++L LV FY + G
Sbjct: 126 RHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNF 182
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A ++F ++ ++N M+VG A G +L + +M+ I+PD T+L LV C
Sbjct: 183 GVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCC 242
Query: 355 SHAGLVDEARKLFDEMESVYGV-SKELKHYGCMADLLGR---AGLIEEALEMIKKMPMGG 410
H + + + +E V S L + D+ + +GL + A + +KK
Sbjct: 243 GHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK----K 298
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMK 440
D+ W+ ++ G G++E A+A + + K
Sbjct: 299 DMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
>gi|255567729|ref|XP_002524843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535903|gb|EEF37563.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 524
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 260/497 (52%), Gaps = 45/497 (9%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L FIK C+ Q+ QIH+ LTK L +P ISS S
Sbjct: 13 LQRFIK-CQ--NQVEQIHSLLLTKAHLLFNPT---------------ISSHSK------- 47
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
+ ST YNT+ RA+ F N V LF+ M PP+ ++FP L++A +
Sbjct: 48 ----------WKSTLFYNTLTRAYLNFGQTYNTVYLFTLMLAHQTPPNSHTFPSLIKAAT 97
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L S+ ++H+QV+K G +CD FV SL+ Y L +A ++FD IL+ +V N
Sbjct: 98 -LSFPSIGTSLHTQVIKRGVLCDPFVQTSLLAFYSQIGCLYNAHKVFDGILHPWIVEYNA 156
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---- 238
++D Y K D+ A LF RM RD VSW T+++G+++S EAI F M+ +
Sbjct: 157 MLDAYAKNNDMGSAILLFKRMLKRDVVSWTTVISGFSRSGLFREAINFFRVMIAHEDVSL 216
Query: 239 --IKPDNIALVSALSACARL---GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
+KP+ VS LS+CA L G L GK +H I N++ + F+ T L+DFY K G
Sbjct: 217 GLVKPNEATYVSVLSSCASLDEGGSLFLGKQMHGSIIRNEVVLTVFIGTALIDFYGKVGC 276
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+N+AI +F S K + +WNAM+ LA +G + +L F M E P+ VT + L
Sbjct: 277 LNSAIRVFNSMTIKQICSWNAMISCLANNGREKQALDMFEMMEEKGPSPNEVTFVVVLTA 336
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C+ A LV +LF M S Y V ++HYGC+ DLLGRAGL+ EA E+I+ MP D
Sbjct: 337 CTRAKLVQFGMRLFQSMWSDYSVKPIMEHYGCVVDLLGRAGLLREASEIIRSMPFEPDAS 396
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
V LLG C+IHG ++A +++L+P G + +L+++ A ++W +R+++
Sbjct: 397 VLGALLGACKIHGANKLANEVGGRLLRLQPLHCGQFVLLSNINAGLEKWSVAADVRKAMV 456
Query: 474 AGKIKKNAGCSLIQLNG 490
I K SLI G
Sbjct: 457 EAGISKVPAYSLINYMG 473
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 260/486 (53%), Gaps = 41/486 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+KRC I + Q+HA F+ L + S + + A S + ++YA
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVL---------AKCAHSGWENSMNYAA 86
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
SIF I P TF +NT+IR + S A+ +++M PD +++P LL+AC++L
Sbjct: 87 SIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLK 146
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S + IH QV KLG DVFV NS LI+
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNS-------------------------------LIN 175
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNI 244
Y + G++ + +F+++ + A SW ++V+ A E + LF M + ++K +
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VSAL ACA G L G +IH ++ N ++ + T LVD Y KCG ++ A+ IF+
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++N T++AM+ GLA+HG G +L FS+MI+ ++PD V + L CSH+GLV E R
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGR 355
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++F EM V +HYGC+ DLLGRAGL+EEALE I+ +P+ + +W L CR+
Sbjct: 356 RVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRV 415
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
N+E+ + AA+ ++KL + G Y +++++Y+ W+DV + R + +K+ G S
Sbjct: 416 RQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Query: 485 LIQLNG 490
+++L G
Sbjct: 476 IVELKG 481
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 253/486 (52%), Gaps = 44/486 (9%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
K+C T+K ++Q+HA + G L+ I K I + ++YA+
Sbjct: 61 LFKQCSTLKDLNQLHASIIRLGF---------DQNLFVIG--KLIDFCAVSDHGDMNYAV 109
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ I F +NT+IR L A + +M I D ++F FLL+ QL
Sbjct: 110 VVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLG 169
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S L + +H +LKLG V+V N+L+H+Y RL+D
Sbjct: 170 SIMLGKQLHVNILKLGLDSHVYVRNTLIHMY---GRLKDVNI------------------ 208
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
AR LFD +P D V+W ++ + EA+ LF M+ ++PD
Sbjct: 209 ----------ARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEAT 258
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LV +SAC+ LG L+ G+ +H ++ N + L+D YAKCG + A E+F +
Sbjct: 259 LVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVS 318
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK-PDGVTILGALVGCSHAGLVDEAR 364
KN+ TWN M++GLA HG +L FS M+ R++ PDGVT L L C++ G V+E R
Sbjct: 319 GKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGR 378
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ FD M + + LKHYG M D+LGRAG +EEA ++IK MPM + +W LL C++
Sbjct: 379 RYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQM 438
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK-NAGC 483
HGNVE+ E + HV+++ + Y +LA++YA++ +W +++K R+S+ ++K G
Sbjct: 439 HGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGN 498
Query: 484 SLIQLN 489
S +++N
Sbjct: 499 SYLEIN 504
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 237/426 (55%), Gaps = 31/426 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ + + S++ +I A+ A+ LF M + + PD + LL ACS
Sbjct: 185 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSD 244
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + + IH V K G D FV C L
Sbjct: 245 LKNLQMGRLIHHIVYKFGLDLDHFV-------------------------------CAAL 273
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K ++ AR LFD+MP RD V+W ++ GYA+ E++ LF M + + PD
Sbjct: 274 VDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDK 333
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+A+V+ + ACA+LG + + + I YI+ + ++D L T ++D +AKCG + +A EIF+
Sbjct: 334 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 393
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+EKN+ +W+AM+ HG GR +L F M+ + I P+ +T++ L CSHAGLV+E
Sbjct: 394 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 453
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F M Y V ++KHY C+ DLLGRAG ++EAL++I+ M + D +W LG CR
Sbjct: 454 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACR 513
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
H +V +AE AA +++L+P++ G Y +L+++YANA RWEDV K R + ++KK G
Sbjct: 514 THKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGW 573
Query: 484 SLIQLN 489
+ I+++
Sbjct: 574 TWIEVD 579
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 169/337 (50%), Gaps = 37/337 (10%)
Query: 93 LNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSL 152
+N F ++ PD Y+ PF++RAC L + + + IH V K G D FV
Sbjct: 12 INCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV---- 67
Query: 153 MHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
C L+D YVK ++ AR LFD+M RD V+W
Sbjct: 68 ---------------------------CAALVDMYVKCREIEDARFLFDKMQERDLVTWT 100
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
++ GYA+ + E++ LF M + + PD +A+V+ + ACA+LG + + + I YI+
Sbjct: 101 VMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK 160
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
+ ++D L T ++D YAKCG + +A EIF+ +EKN+ +W+AM+ HG GR +L F
Sbjct: 161 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 220
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA--DLL 390
M+ + + PD +T+ L CS + R + VY +L H+ C A D+
Sbjct: 221 RMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIH---HIVYKFGLDLDHFVCAALVDMY 277
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
G+ IE+A + KMP D+ W+ ++GG GN
Sbjct: 278 GKCREIEDARFLFDKMP-ERDLVTWTVMIGGYAECGN 313
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 166/368 (45%), Gaps = 47/368 (12%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + ++ +I + ++VLF +MR + PD + ++ AC++L +
Sbjct: 87 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 146
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
A+ I + + F DV +L + M ID
Sbjct: 147 MHKARIIDDYIQRKKFQLDV-ILGTAM------------------------------IDM 175
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G + AR++FDRM ++ +SW ++A Y Q +A+ LF M+ + PD I L
Sbjct: 176 YAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITL 235
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S L AC+ L L+ G+ IH + + +D F+ LVD Y KC I A +F+ E
Sbjct: 236 ASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPE 295
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++L TW M+ G A G SLV F +M E + PD V ++ + C+ G + +AR +
Sbjct: 296 RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI 355
Query: 367 FD-------EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
D +++ + G + M D+ + G +E A E+ +M +V WS ++
Sbjct: 356 DDYIQRKKFQLDVILGTA--------MIDMHAKCGCVESAREIFDRME-EKNVISWSAMI 406
Query: 420 GGCRIHGN 427
HG
Sbjct: 407 AAYGYHGQ 414
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
+V G+A+ F ++ +PDN L + AC L L+ G+ IH +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
+ +D F+ LVD Y KC I A +F+ QE++L TW M+ G A G SLV F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCM 386
+M E + PD V ++ + C+ G + +AR + D +++ + G + M
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTA--------M 172
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
D+ + G +E A E+ +M +V WS ++ HG
Sbjct: 173 IDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 212
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 241/428 (56%), Gaps = 33/428 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ IP S+N I + + A+ LF +M ++ PD + +L AC+Q
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQ 247
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S L + +HS + GF ++ ++N+L
Sbjct: 248 SGSIELGRQVHSWINDHGFGXNLKIVNAL------------------------------- 276
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G+L A LF + +D +SW TL+ GY + +EA+ LF +M+ KP++
Sbjct: 277 IDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPND 336
Query: 244 IALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ ++S LSACA LG ++ G+ IH YI+ L + S L T L+D YAKCG I A ++F
Sbjct: 337 VTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVF 396
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+S ++L +WNAM+ G AMHG + FSRM + I+PD +T +G L CSH+G++D
Sbjct: 397 DSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLD 456
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R +F M Y + +L+HYGCM DL G +GL +EA +MI M M D +W LL
Sbjct: 457 LGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKA 516
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C++HGNVE+ E+ A++++K++PE+ G Y +L+++YA A+RW +V K R L+ +KK
Sbjct: 517 CKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVP 576
Query: 482 GCSLIQLN 489
GCS I+++
Sbjct: 577 GCSSIEID 584
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 234/428 (54%), Gaps = 12/428 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CKT++ + IHA + GL YA++ SP D L YA
Sbjct: 7 SLLHXCKTLQSLRIIHAQMIKTGL---------HNTNYALSKLLE-XCVLSPHFDGLPYA 56
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+F+ I P +NT+ R H L S P++A+ L+ M ++ + P+ Y+FPFLL++C++
Sbjct: 57 ISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKS 116
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q +H QVLK GF D+++ SL+ +Y RL DAQ++ D+ +RDVVS LI
Sbjct: 117 XAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALI 176
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY G + A ++FD +P +D VSW ++GYA++ +EA++LF MM +++PD
Sbjct: 177 TGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDES 236
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ LSACA+ G +E G+ +H +I + + + L+D Y+KCG + TA +F+
Sbjct: 237 TMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGL 296
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
K++ +WN ++ G L + +L+ F M+ + KP+ VT+L L C+H G +D R
Sbjct: 297 SNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGR 356
Query: 365 KLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ ++ + GV+ + D+ + G IE A ++ M + + W+ ++ G
Sbjct: 357 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFA 415
Query: 424 IHGNVEIA 431
+HG A
Sbjct: 416 MHGRANAA 423
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 244/431 (56%), Gaps = 33/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A +F+ IP S+N +I + + A+ LF +M ++ PD + ++ A
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+Q S L + +HS + GF ++ ++N+L
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNAL---------------------------- 276
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
ID Y+K G++ A LF+ + ++D +SW TL+ GY + +EA+ LF M+
Sbjct: 277 ---IDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYI--ELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
P+++ ++S L ACA LG +E G+ IH YI L + S T L+D YAKCG I A
Sbjct: 334 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 393
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F+S ++L +WNAM+ G AMHG + FSRM + I+PD +T +G L CSH+G
Sbjct: 394 QVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSG 453
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
++D R +F M+ Y ++ +L+HYGCM DLLG +GL +EA EMI M M D +W L
Sbjct: 454 MLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSL 513
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+++ NVE+ E+ A++++K++P++ G Y +L+++YA A RW +V KIR L+ +K
Sbjct: 514 LKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMK 573
Query: 479 KNAGCSLIQLN 489
K GCS I+++
Sbjct: 574 KVPGCSSIEID 584
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 238/428 (55%), Gaps = 12/428 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CKT++ + IHA + GL H L + F +S P D L YA
Sbjct: 7 SLLHNCKTLQSLRMIHAQMIKTGL------HNTNYALSKLIEFCVLS----PHFDGLPYA 56
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+F I P+ +NT+ R H L S P++A+ L+ M ++ + P+ Y+FPFLL++C++
Sbjct: 57 ISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKS 116
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q IH VLKLG+ D++V SL+ +Y RL DA+++FD+ +RDVVS LI
Sbjct: 117 KAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALI 176
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY G +A A+++FD +P +D VSW +++GYA++ +EA++LF MM +++PD
Sbjct: 177 TGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDES 236
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VS +SACA+ +E G+ +H +I+ + + + L+D Y KCG + TA +FE
Sbjct: 237 TMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL 296
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
K++ +WN ++ G L + +L+ F M+ + P+ VT+L L C+H G ++ R
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR 356
Query: 365 KLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ + + + GV+ H + D+ + G IE A ++ + + + W+ ++ G
Sbjct: 357 WIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFA 415
Query: 424 IHGNVEIA 431
+HG A
Sbjct: 416 MHGRANAA 423
>gi|357152230|ref|XP_003576051.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 468
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 263/494 (53%), Gaps = 53/494 (10%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
M+L+ RC T++ + +HA L G L + +L A P ++
Sbjct: 14 MSLSLLADRCSTLRGLALVHAAMLVSGRL-ADDAFAASRLLNAYANLSPPAAV------- 65
Query: 61 LSYALSIFNNIPY-PSTFSYNTIIRAHTLFSSPLNAVVLFSQMR---TVSIPPDFYSFPF 116
L +++PY P++F NT +RA P +A FS R + S P ++FPF
Sbjct: 66 ----LRFLSSLPYAPNSFMLNTTLRALASSPDPASAFPFFSLHRRSGSSSYSPGRHTFPF 121
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
LL+A ++L + ++Q IH+ V+K G D +V N L+ Y V
Sbjct: 122 LLKASARL-ALPVSQQIHALVVKHGLHLDTYVANGLVRAYSV------------------ 162
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
AG + AR++FD +P R V + T+V+GY + E+A+ F M++
Sbjct: 163 -------------AGLIGVARKVFDGLPERSTVVYTTMVSGYTLNGCYEDAMGAFGEMIN 209
Query: 237 LDIKPDNIALVSALSACARL--GELEQGKNIHRYIELNQIR--VDSFLSTGLVDFYAKCG 292
+P ++ L S LSACAR G L G+ +H IE+ + V LST LVD YAK
Sbjct: 210 EGFEPGDVVLASVLSACARSESGGLVIGRRVHNIIEMRGVEAPVGVILSTALVDMYAKNA 269
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
I A+ +F+ E+ TWNA++ GLA HG G+ +LV F +M++ + P+ T +G L
Sbjct: 270 AIEEAVTVFKGMPERRTATWNALISGLAHHGHGKYALVMFQQMLQEGVPPNATTFVGVLS 329
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
+G++DEARK F M+ +G++ ++HYGCM DLLGR+GL+ EA EMI+ M D
Sbjct: 330 AYCLSGMIDEARKAFRSMKD-FGLTPSIQHYGCMVDLLGRSGLLVEAEEMIRGMTCEADT 388
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
+W LL CR HGN++IA A ++KL PE+ GVY VL+++YA+A RW+DV ++R+ +
Sbjct: 389 MIWGALLTACRNHGNIDIALRTALEILKLDPENHGVYVVLSNIYADAGRWQDVDRLRKVM 448
Query: 473 DAGKIKKNAGCSLI 486
+ K G S +
Sbjct: 449 KGALLSKIPGSSAV 462
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 265/485 (54%), Gaps = 18/485 (3%)
Query: 14 KQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
+ + +IHAH L G + SP H+ + ++ LSYA + P
Sbjct: 100 RHLREIHAHLLVSGRI-ASPSHLAAFLASLASSSSDDDDDGD-----LSYARLLLPRRP- 152
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ-- 131
+ ++N+++RA P A F R + + PD YSF FL+RA + L + + +
Sbjct: 153 ATLLAHNSLLRALARGRRPHLA---FGAFRDLPLAPDNYSFTFLVRAATALAAAAASALD 209
Query: 132 ------TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
++H+ L+ G D V + + +Y + A+ F EI DVV ++
Sbjct: 210 AALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVG 269
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
G+ AR+LFD MP RD V+W ++AGY + + EA++LF M +
Sbjct: 270 ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT 329
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LVSAL+ACA+LG LE+GK +H +R+ L T L+D Y+KCG + A+E+F+S
Sbjct: 330 LVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 389
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E+N++TW + + GLAM+G+GR L F RM ++P+GVT + L GCS AGLVDE R
Sbjct: 390 ERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRA 449
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
FD M+S +G+ L+HYGCM DL GRAG +++A+ I MP+ VW LL RIH
Sbjct: 450 CFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIH 509
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
NVE+ + A + +M ++ ++ + +L+++YA++ W+ V +R + A +KK GCS
Sbjct: 510 KNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSA 569
Query: 486 IQLNG 490
I++ G
Sbjct: 570 IEVGG 574
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 260/486 (53%), Gaps = 41/486 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+KRC I + Q+HA F+ L + S + + A S + ++YA
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVL---------AKCAHSGWENSMNYAA 86
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
SIF I P TF +NT+IR + S A+ +++M PD +++P LL+AC++L
Sbjct: 87 SIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLK 146
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S + IH QV KLG DVFV NS LI+
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNS-------------------------------LIN 175
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNI 244
Y + G++ + +F+++ + A SW ++V+ A E + LF M + ++K +
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VSAL ACA G L G +IH ++ N ++ + T LVD Y KCG ++ A+ IF+
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++N T++AM+ GLA+HG G +L FS+MI+ ++PD V + L CSH+GLV E R
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGR 355
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++F EM V +HYGC+ DLLGRAGL+EEALE I+ +P+ + +W L CR+
Sbjct: 356 RVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRV 415
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
N+E+ + AA+ ++KL + G Y +++++Y+ W+DV + R + +K+ G S
Sbjct: 416 RQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Query: 485 LIQLNG 490
+++L G
Sbjct: 476 IVELKG 481
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 255/485 (52%), Gaps = 42/485 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I +C +++++ QI A+ + + +S + + F SPT +SYA
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVS-------FVAKLINF----CTESPTESSMSYAR 83
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F + P +N++ R ++ F++PL LF ++ I PD Y+FP LL+AC+
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + +H +KLG +V+V C TLI+
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYV-------------------------------CPTLIN 172
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y + D+ AR +FDR+ V + ++ GYA+ ++ EA+ LF M +KP+ I
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
L+S LS+CA LG L+ GK IH+Y + + ++T L+D +AKCG ++ A+ IFE +
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+ W+AM+V A HG S++ F RM ++PD +T LG L CSH G V+E RK
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F +M S +G+ +KHYG M DLL RAG +E+A E I K+P+ +W LL C H
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSH 412
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+++AE +E + +L GG Y +L+++YA +WE V +R+ + K K GCS
Sbjct: 413 NNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSS 472
Query: 486 IQLNG 490
I++N
Sbjct: 473 IEVNN 477
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 127/325 (39%), Gaps = 45/325 (13%)
Query: 2 TLNNFIKRCKTIKQIHQ-IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
T + +K C K + + H L+ L ++ T++ T + + SA
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARC----- 185
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+F+ I P YN +I + + P A+ LF +M+ + P+ + +L +
Sbjct: 186 ------VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS 239
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L S L + IH K F V V +L+ ++ L DA +F+++ Y+D +
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW 299
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ +I Y G + E+++ +F M +++
Sbjct: 300 SAMIVAYANHG-------------------------------KAEKSMLMFERMRSENVQ 328
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD I + L+AC+ G +E+G+ + V S G +VD ++ G + A E
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHG 323
+ W +L + H
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHN 413
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 243/439 (55%), Gaps = 38/439 (8%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF 111
+AS+P + LSYA SIF+ I +P TF++NTIIRAH S + + S+M + PD
Sbjct: 31 AASAPAS--LSYARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLF-SKMAMAGVSPDH 87
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
++FPF+L+AC++L +HS + KLGF DV+V N L+H Y
Sbjct: 88 FTFPFVLKACARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFY--------------- 129
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
C G L A ++F+ MP RD VSW +++A +A++ EA+ LF
Sbjct: 130 -------GC---------CGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALF 173
Query: 232 CNMMDL-DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
M + +KPD + ++S +SA + LG+LE GK I +I N + L T LVD +++
Sbjct: 174 QRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSR 233
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
CG I ++ +F+ E+N+ TW A++ GLA+HG +L F M +PD VT G
Sbjct: 234 CGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGV 293
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
LV CSH GLV E +F+ + + YG+ +HYGCM DLLGRAGL+ EA + + MP+
Sbjct: 294 LVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRP 353
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR 470
+ +W LLG C H +E+AE E + +L G Y +L++VY RW + +R
Sbjct: 354 NSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRN 413
Query: 471 SLDAGKIKKNAGCSLIQLN 489
S+ +I K GCSLI +N
Sbjct: 414 SMREKRISKKPGCSLINVN 432
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/485 (31%), Positives = 263/485 (54%), Gaps = 14/485 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++R + I Q+ IHA + G H + F+ + S S + YA
Sbjct: 54 SLLQRSRHINQVLPIHAQLIRNG-------HSQDPFM----VFELLRSCSK--CHAIDYA 100
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
IF P+ + Y +I + L A+ L+S+M SI PD Y +L+AC
Sbjct: 101 SRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQ 160
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +HS+ LKLGF + V +M +Y L DA+ +F+E + DVV+ +I
Sbjct: 161 LALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEE-MPEDVVASTVMI 219
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
Y G + A +F R+ +D V W ++ G+ ++++ A++ F M +++P+
Sbjct: 220 SSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEF 279
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V LSAC++LG LE G+ +H Y+ +I ++ F+ L++ Y++CG I+ A +F+
Sbjct: 280 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++++ T+N M+ GL+M+G R ++ F M+ R++P VT +G L CSH GLVD
Sbjct: 340 KDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGF 399
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++F M Y V +++HYGCM DLLGR G +EEA ++I+ M M D + LL C++
Sbjct: 400 EIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKM 459
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H N+E+ E A+ + D G Y +L+ VYA++ +W++ ++R + ++K GCS
Sbjct: 460 HKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCS 519
Query: 485 LIQLN 489
I++N
Sbjct: 520 SIEVN 524
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 6/231 (2%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
+S R + Q IH + N D F+ L+ +KC I+ A IF+ + N+
Sbjct: 53 ISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNV 112
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+ + A++ G G ++ +SRM+ I PD + L C + E R++
Sbjct: 113 YLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSR 172
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ S L M +L G+ G + +A + ++MP DV + ++ G VE
Sbjct: 173 ALKLGFSSNRLVRLRIM-ELYGKCGELGDARRVFEEMP--EDVVASTVMISSYSDQGLVE 229
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
A A V + +D + + D + + ++ R + ++ N
Sbjct: 230 EAGAVFSRVRR---KDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPN 277
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 278/556 (50%), Gaps = 83/556 (14%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L I RC +++ QI +++ +L + + TF S+ D +
Sbjct: 9 LLELISRCSSLRVFKQIQTQLISRDILRDE------LFINKVVTFLGKSA------DFAT 56
Query: 63 YALSIFNNI-PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
Y+ I ++I S+FSYNT++ ++ + P + ++ + PD ++FP + +AC
Sbjct: 57 YSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKAC 116
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + IH V K+GF D++V NSL+H Y V R+A ++FD++ RDVVS
Sbjct: 117 GKFSGIREGKQIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWT 176
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDA--------VSWG--------------------- 212
+I G+ + G A F +M VS G
Sbjct: 177 GIITGFTRTGLYKEALDTFSKMDVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 213 -------TLVAGYAQSDQCEEAIQLFCNMMDLD--------------------------- 238
L+ Y + +Q +A+ +F + D
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMM 296
Query: 239 -----IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
IKPD L S LSACA LG ++ G+ +H Y+ I+ D+ + T +VD YAKCGY
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGY 356
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
I TA++IF + KN+FTWNA+L GLA+HG G SL YF M++ KP+ VT L L
Sbjct: 357 IETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNA 416
Query: 354 CSHAGLVDEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C H GLVDE R+ F +M++ Y +S +L+HYGC+ DL RAGL++EALE+IK MP+ DV
Sbjct: 417 CCHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVKPDV 476
Query: 413 FVWSGLLGGCRIHGNV-EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
+ +L C+ G + E+ + + ++++ ED GVY +L++++A RW+DV +IRR
Sbjct: 477 RICGAVLSACKSRGTLMELPKEILDSFLEMEFEDSGVYVLLSNIFAANRRWDDVSRIRRL 536
Query: 472 LDAGKIKKNAGCSLIQ 487
+ I K G S I+
Sbjct: 537 MKVKGISKVPGSSSIE 552
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 260/481 (54%), Gaps = 49/481 (10%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
+K ++ +HA L K +P + T IL +++SSP D YA ++
Sbjct: 8 NMKSVYNLHA-TLIKNAQHDNPLSLRTFILRC-------ANSSSPP-DTARYAAAVLLRF 58
Query: 72 PYPS-TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P P F YN +IR H +P A+ LFS M ++P D ++FP +L++ S+L H
Sbjct: 59 PIPGDPFPYNAVIR-HVALHAPSLALALFSHMHRTNVPFDHFTFPLILKS-SKLNPH--- 113
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
IH+ VLKLGF +++V N+L I+ Y +
Sbjct: 114 -CIHTLVLKLGFHSNIYVQNAL-------------------------------INSYGTS 141
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM--DLDIKPDNIALVS 248
G L + +LFD MP RD +SW +L++ +A+ +EA+ LF M + DI PD + ++S
Sbjct: 142 GSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKESDILPDGVVMLS 201
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
+SA + LG LE G +H +I + + L + L+D Y++CG I+ ++++F+ +N
Sbjct: 202 VISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRCGDIDRSVKVFDEMPHRN 261
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ TW A++ GLA+HG GR +L F M+E+ +KPD + +G LV CSH GLV+E R++F
Sbjct: 262 VVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGGLVEEGRRVFS 321
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M S YG+ L+HYGCM DLLGRAG++ EA + ++ M + + +W LLG C H +
Sbjct: 322 SMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTLLGACVNHNLL 381
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+AE A E + +L P G Y +L++ Y W +R S+ KI K G SL+ +
Sbjct: 382 VLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVRNSMRESKIVKEPGLSLVHI 441
Query: 489 N 489
+
Sbjct: 442 D 442
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 265/485 (54%), Gaps = 18/485 (3%)
Query: 14 KQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY 73
+ + +IHAH L G + SP H+ + ++ LSYA + P
Sbjct: 107 RHLREIHAHLLVSGRI-ASPSHLAAFLASLASSSSDDDDDGD-----LSYARLLLPRRP- 159
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ-- 131
+ ++N+++RA P A F R + + PD YSF FL+RA + L + + +
Sbjct: 160 ATLLAHNSLLRALARGRRPHLA---FGAFRDLPLVPDNYSFTFLVRAATALAAAAASALD 216
Query: 132 ------TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
++H+ L+ G D V + + +Y + A+ F EI DVV ++
Sbjct: 217 AALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVG 276
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
G+ AR+LFD MP RD V+W ++AGY + + EA++LF M +
Sbjct: 277 ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT 336
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LVSAL+ACA+LG LE+GK +H +R+ L T L+D Y+KCG + A+E+F+S
Sbjct: 337 LVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 396
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E+N++TW + + GLAM+G+GR L F RM ++P+GVT + L GCS AGLVDE R
Sbjct: 397 ERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRA 456
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
FD M+S +G+ L+HYGCM DL GRAG +++A+ I MP+ VW LL RIH
Sbjct: 457 CFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIH 516
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
NVE+ + A + +M ++ ++ + +L+++YA++ W+ V +R + A +KK GCS
Sbjct: 517 KNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSA 576
Query: 486 IQLNG 490
I++ G
Sbjct: 577 IEVGG 581
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 264/487 (54%), Gaps = 46/487 (9%)
Query: 6 FIKRCKTIK-QIHQIHAHFLTKGLLFLSP---CHILTTILYAITTFKPISSASSPTTDPL 61
++ C + K ++ IHA + G+L +P H++ TI ++ P+S A + T L
Sbjct: 24 LLQFCASSKHKLRXIHAFSIRHGVLLNNPDMGKHLIFTI---VSLSAPMSYAYNVFTWVL 80
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
SYA ++F I P+ F++NT+ R + +P A+ + QM I PD +++PFLL+A
Sbjct: 81 SYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAI 140
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S+ + + IHS ++ GF VFV NSL+H+Y +C
Sbjct: 141 SKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYA---------------------AC- 178
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
GD A +F+ M RD V+ +++ G+A + + EA+ LF M ++P
Sbjct: 179 ---------GDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEP 229
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D +VS LSA A LG LE G+ +H Y+ +R +S ++ L+D YAKC I
Sbjct: 230 DGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAKCDAI------- 282
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
E+N +W +++VGLA++G G +L F M + P +T +G L CSH G++D
Sbjct: 283 -WEXERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLD 341
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E F M+ +G+ ++HYGCM DLL RAGL+++A E I+ MP+ + W LLG
Sbjct: 342 EGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGA 401
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C IHG++ + E A H++KL+P+ G Y +L+++Y + RW DV IRRS+ +KK +
Sbjct: 402 CTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTS 461
Query: 482 GCSLIQL 488
G SL++L
Sbjct: 462 GYSLVEL 468
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 265/480 (55%), Gaps = 43/480 (8%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++ + QIHA LT + P ++ L I F A SP D + YA +F+ I
Sbjct: 1 MRVLRQIHARLLTHAM----PISSISFGLCKIIGF----CALSPYGD-IDYARKLFSQIQ 51
Query: 73 YPSTFSYNTIIRAHTLFSSP-LNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQLCSHSLA 130
P+ FS+N++IR + +P V+LF +M P P+ ++ F+L+ACS + +
Sbjct: 52 RPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEG 111
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
Q +H+ VLK GF FV +L ++ Y K
Sbjct: 112 QQVHANVLKSGFGSSPFVETAL-------------------------------VNFYAKC 140
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
D+ A ++FD + R+ V+W T+++GYA+ EA+ LF +M + PD + +VS +
Sbjct: 141 EDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVI 200
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
SACA G L+ GK +H YI I D LST LV+ YAKCG I A E+F++ K+
Sbjct: 201 SACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTK 260
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
W++M+VGLA++GL +L F RM EA++KP+ VT +G L C+H+GLV E R+ + M
Sbjct: 261 AWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSM 320
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+G+ ++ YGCM DLL RA L+E+A +++ MP+ + +W LL GC+ N++
Sbjct: 321 LE-FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDK 379
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+E A+ +++L+P + Y +L+++YA+ +WE + ++R+ + IK GCS I+++G
Sbjct: 380 SEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDG 439
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 129/321 (40%), Gaps = 48/321 (14%)
Query: 2 TLNNFIKRCKTIKQI---HQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
T+ +K C + + Q+HA+ L G F S + T ++ + I AS
Sbjct: 94 TMAFVLKACSIVSALEEGQQVHANVLKSG--FGSSPFVETALVNFYAKCEDIVLASK--- 148
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+F+ I + +++T+I + A+ LF M+ + PD + ++
Sbjct: 149 --------VFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVI 200
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC+ + + +H+ + K D+ + +L+++Y + A+E+FD
Sbjct: 201 SACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDA------- 253
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
MP +D +W +++ G A + E+A++ F M +
Sbjct: 254 ------------------------MPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAK 289
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KP+++ + LSACA G + +G+ + I L +VD + + A
Sbjct: 290 VKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDAC 349
Query: 299 EIFESSQ-EKNLFTWNAMLVG 318
+ E+ N W +LVG
Sbjct: 350 TLVETMPISPNPVIWRTLLVG 370
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 235/425 (55%), Gaps = 8/425 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ +P S+NT+I + L A LF + S D +++ ++ Q
Sbjct: 223 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWTAMVSGYVQ 278
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A+ + + + + N+++ Y R+ A+ELF+ + ++V S NT+
Sbjct: 279 NGMLDEARRVFDGMPEKNSVS----WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTM 334
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY + GD+A AR FDRMP RD++SW ++AGYAQS EEA+ LF M + +
Sbjct: 335 ITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 394
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S LS CA + LE GK +H + + ++ L+ Y KCG I+ A +FE
Sbjct: 395 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 454
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+EK + +WN M+ G A HG G+ +L+ F M + I PD VT++G L CSH GLVD+
Sbjct: 455 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKG 514
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F M YG++ KHY CM DLLGRAG +++A ++K MP D W LLG R
Sbjct: 515 TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASR 574
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
IHGN E+ E AA+ + +++P++ G+Y +L+++YA + RW DV ++R + +KK G
Sbjct: 575 IHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGY 634
Query: 484 SLIQL 488
S +++
Sbjct: 635 SWVEV 639
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 22/316 (6%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
+ D A +F +P S+N +I + + A +LF QM D S+
Sbjct: 92 SNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQM----PERDVVSWNA 147
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L +Q A+ I ++ I N ++ Y R+ DA+ LF+ +
Sbjct: 148 MLSGYAQNGYVKEAKEIFDEMPCKNSIS----WNGMLAAYVQNGRIEDARRLFESKADWE 203
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
++S N ++ GYVK L AR +FDRMP RD VSW T+++GYAQ+ + EA +LF
Sbjct: 204 LISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPV 263
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYIN 295
D+ + +S + G L++ + + + E N + ++ ++ Y +C ++
Sbjct: 264 RDV----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAG-----YVQCKRMD 314
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A E+FE+ +N+ +WN M+ G A +G + +F RM + D ++ + G +
Sbjct: 315 QARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQR----DSISWAAIIAGYA 370
Query: 356 HAGLVDEARKLFDEME 371
+G +EA LF EM+
Sbjct: 371 QSGYGEEALHLFVEMK 386
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 18/257 (7%)
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A LF+ + R +S N +I G + ARQLF++MP RD VSW +++G +
Sbjct: 68 ALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNL 127
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
A LF M + D+ ++ + LS A+ G +++ K I + +S G+
Sbjct: 128 RAARLLFDQMPERDV----VSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGM 179
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
+ Y + G I A +FES + L +WN M+ G + F RM E D
Sbjct: 180 LAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER----DE 235
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
V+ + G + G + EA++LF+E +++ + M + G+++EA +
Sbjct: 236 VSWNTMISGYAQNGELLEAQRLFEE-----SPVRDVFTWTAMVSGYVQNGMLDEARRVFD 290
Query: 405 KMPMGGDVFVWSGLLGG 421
MP V W+ ++ G
Sbjct: 291 GMPEKNSV-SWNAIIAG 306
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 22/273 (8%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
D+V N I +++ G A +LF+ MP R ++SW +++G +D+ A QLF M
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
D+ N+ +S C R L + + + ++ + V S+ ++ YA+ GY+
Sbjct: 108 TRDLVSWNV----MISGCVRYRNLRAARLL--FDQMPERDVVSW--NAMLSGYAQNGYVK 159
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A EIF+ KN +WN ML +G + R+ E++ + ++ + G
Sbjct: 160 EAKEIFDEMPCKNSISWNGMLAAYVQNG----RIEDARRLFESKADWELISWNCMMGGYV 215
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+ +AR +FD M VS + M + G + EA + ++ P+ DVF W
Sbjct: 216 KRNRLVDARGIFDRMPERDEVS-----WNTMISGYAQNGELLEAQRLFEESPV-RDVFTW 269
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
+ ++ G +G ++ A V PE V
Sbjct: 270 TAMVSGYVQNGMLD----EARRVFDGMPEKNSV 298
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 229/406 (56%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N++I + + + A +LF+ M+ + DF + +L ACS LC+ + +H+
Sbjct: 272 WNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYAC 331
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
K+G ICD V ++ + Y L DA +LF E+ D + N++I Y +G + A+Q
Sbjct: 332 KVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQ 391
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+F+ MP + +SW +++ G +Q+ EA+ LFC M LD++ + L S +SACA +
Sbjct: 392 IFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISS 451
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
LE G+ I + + D +ST LVDFY KCG+I ++F++ + + +WN+ML+G
Sbjct: 452 LELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMG 511
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
A +G G +L F+ M A ++P +T G L C H GLV E + F+ M+ Y +
Sbjct: 512 YATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDP 571
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
++HY CM DL RAG +EEA+ +IK+MP D +WS +L GC HG ++ E A+ +
Sbjct: 572 GIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQI 631
Query: 439 MKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
++L PE+ G Y L+ ++A + WE +R+ + +++K G S
Sbjct: 632 IELDPENSGAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGYS 677
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 176/400 (44%), Gaps = 36/400 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP---DFYSFPFL 117
+ A +FN +P + +N++I ++ SP AV LF ++ + D + +
Sbjct: 119 MEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATV 178
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+ AC+ L + IH+++L D + +SL+++Y L A + + + D
Sbjct: 179 IGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDD 238
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
S + LI GY G + AR+ F R V W +L++GY +++ EA LF +M
Sbjct: 239 FSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKK 298
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+K D L + LSAC+ L + GK +H Y + D+ +++ +D Y+KCG +N A
Sbjct: 299 GLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDA 358
Query: 298 I-------------------------------EIFESSQEKNLFTWNAMLVGLAMHGLGR 326
+IF + K+L +WN+M+VGL+ +G
Sbjct: 359 CKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPV 418
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCM 386
+L F M + ++ + + + C+ ++ ++F +V G+ + +
Sbjct: 419 EALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFAR-ATVVGLDSDEVISTSL 477
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
D + G IE ++ M M D W+ +L G +G
Sbjct: 478 VDFYCKCGFIEIGRKLFDTM-MKSDEISWNSMLMGYATNG 516
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 43/237 (18%)
Query: 127 HSLAQ--TIHSQVLKLGFICDVFVL-NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
HS+ Q +H K G I L N L+ +Y + DA +LFDE+ +R+ S NT+
Sbjct: 19 HSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTM 78
Query: 184 IDGYV-------------------------------KAGDLAHARQLFDRMPFRDAVSWG 212
I+GY+ KAG++ AR+LF+ MP R+ V W
Sbjct: 79 IEGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWN 138
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKP------DNIALVSALSACARLGELEQGKNIH 266
+++ YA++ EA++LF +L++ P D L + + AC LGE++ GK IH
Sbjct: 139 SMIHSYARNGSPREAVRLF---KELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIH 195
Query: 267 RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
I ++ + +DS L++ L++ Y KCG +++A + + +E + F+ +A++ G A HG
Sbjct: 196 ARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHG 252
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 43/291 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IFN +P S S+N++I + P+ A+ LF M + + + ++ ++ AC+
Sbjct: 389 AKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACAS 448
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S L + I ++ +G D + SL+ YC + ++LFD ++ D +S N++
Sbjct: 449 ISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSM 508
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY G H EA+ LF M ++P
Sbjct: 509 LMGYATNG---HGL----------------------------EALTLFNEMRHAGVRPTE 537
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYINTA 297
I LSAC G +++G + N ++ D + G +VD +A+ G + A
Sbjct: 538 ITFTGVLSACDHCGLVKEG-----WRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEA 592
Query: 298 IEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
+ + + E + W+++L G HG L ++IE + G +
Sbjct: 593 MNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYV 643
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 266/512 (51%), Gaps = 25/512 (4%)
Query: 2 TLNNFIKRCKTIKQI---HQIHAHFLTKGLLFLSPCHILTTILY--------AITTFK-- 48
TL N + C + ++H+ + GL P +Y A T F+
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 225
Query: 49 PISSASSPTT--------DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
P+ S SS + A S+F ++P S S+N +I + A+ LFS
Sbjct: 226 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 285
Query: 101 QM-RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
+M S+ PD ++ +L AC+ L + + + +H+ +L+ + V N+L+ Y
Sbjct: 286 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 345
Query: 160 HRLRDAQELFDEILYRD--VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
+ +A+ + D+ + D V+S L++GYVK GD+ AR++F M RD V+W ++ G
Sbjct: 346 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 405
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
Y Q+ + +EAI LF +M+ +P++ L + LS CA L L+ GK IH + +
Sbjct: 406 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 465
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
S +S ++ YA+ G A +F+ K TW +M+V LA HG G ++ F M+
Sbjct: 466 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 525
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
A ++PD +T +G L CSHAG V+E ++ +D++++ + ++ E+ HY CM DLL RAGL
Sbjct: 526 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 585
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
EA E I++MP+ D W LL CR+H N E+AE AAE ++ + P + G Y +A+VY
Sbjct: 586 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 645
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ RW D +I ++ ++K G S +
Sbjct: 646 SACGRWSDAARIWKARKEKAVRKETGFSWTHI 677
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 178/419 (42%), Gaps = 37/419 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F +P S+ ++ A+ M P ++ +L +
Sbjct: 114 LADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSS 173
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + ++ + +HS V+KLG V V NS++++Y A +F+ + R V S
Sbjct: 174 CAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSW 233
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDI 239
N ++ G + A LF+ MP R VSW ++AGY Q+ +A++LF M+ + +
Sbjct: 234 NAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 293
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + S LSACA LG + GK +H YI ++ +S ++ L+ YAK G + A
Sbjct: 294 APDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARR 353
Query: 300 IFESSQEKNL----FT-----------------------------WNAMLVGLAMHGLGR 326
I + S E +L FT W AM+VG +G
Sbjct: 354 IMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND 413
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF-DEMESVYGVSKELKHYGC 385
++ F MI +P+ T+ L C+ +D +++ + S+ S + +
Sbjct: 414 EAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN--A 471
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
+ + R+G A M ++ + W+ ++ HG E A E +++ E
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVE 530
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 166/362 (45%), Gaps = 48/362 (13%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR----LRDAQELF 169
+ LL+ C + + IH++ +K G + ++ N+L+ Y LRDA+ LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 170 DEI--LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
DEI R+V + N+L+ + K+G LA AR +F MP RDAVSW +V G ++ + EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
I+ +M P L + LS+CA G+ +H ++ + ++ +++
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 288 YAKCGYINTAIEI-------------------------------FESSQEKNLFTWNAML 316
Y KCG TA + FES ++++ +WNAM+
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMI 268
Query: 317 VGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
G +GL +L FSRM+ E+ + PD TI L C++ G V +++ Y
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH-----AYI 323
Query: 376 VSKELKHYGCMADLL----GRAGLIEEALE-MIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+ E+ + + + L ++G +E A M + M +V ++ LL G G++E
Sbjct: 324 LRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMES 383
Query: 431 AE 432
A
Sbjct: 384 AR 385
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 266/512 (51%), Gaps = 25/512 (4%)
Query: 2 TLNNFIKRCKTIKQI---HQIHAHFLTKGLLFLSPCHILTTILY--------AITTFK-- 48
TL N + C + ++H+ + GL P +Y A T F+
Sbjct: 60 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 49 PISSASSPTT--------DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
P+ S SS + A S+F ++P S S+N +I + A+ LFS
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 101 QM-RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
+M S+ PD ++ +L AC+ L + + + +H+ +L+ + V N+L+ Y
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239
Query: 160 HRLRDAQELFDEILYRD--VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
+ +A+ + D+ + D V+S L++GYVK GD+ AR++F M RD V+W ++ G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
Y Q+ + +EAI LF +M+ +P++ L + LS CA L L+ GK IH + +
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
S +S ++ YA+ G A +F+ K TW +M+V LA HG G ++ F M+
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
A ++PD +T +G L CSHAG V+E ++ +D++++ + ++ E+ HY CM DLL RAGL
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
EA E I++MP+ D W LL CR+H N E+AE AAE ++ + P + G Y +A+VY
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 539
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ RW D +I ++ ++K G S +
Sbjct: 540 SACGRWSDAARIWKARKEKAVRKETGFSWTHI 571
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 178/419 (42%), Gaps = 37/419 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F +P S+ ++ A+ M P ++ +L +
Sbjct: 8 LADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSS 67
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + ++ + +HS V+KLG V V NS++++Y A +F+ + R V S
Sbjct: 68 CAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSW 127
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDI 239
N ++ G + A LF+ MP R VSW ++AGY Q+ +A++LF M+ + +
Sbjct: 128 NAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 187
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + S LSACA LG + GK +H YI ++ +S ++ L+ YAK G + A
Sbjct: 188 APDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARR 247
Query: 300 IFESSQEKNL----FT-----------------------------WNAMLVGLAMHGLGR 326
I + S E +L FT W AM+VG +G
Sbjct: 248 IMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND 307
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF-DEMESVYGVSKELKHYGC 385
++ F MI +P+ T+ L C+ +D +++ + S+ S + +
Sbjct: 308 EAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN--A 365
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
+ + R+G A M ++ + W+ ++ HG E A E +++ E
Sbjct: 366 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVE 424
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 42/282 (14%)
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
+ K+G LA AR +F MP RDAVSW +V G ++ + EAI+ +M P L
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI------ 300
+ LS+CA G+ +H ++ + ++ +++ Y KCG TA +
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 301 -------------------------FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
FES ++++ +WNAM+ G +GL +L FSRM
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 336 I-EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL---- 390
+ E+ + PD TI L C++ G V +++ Y + E+ + + + L
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVH-----AYILRTEMAYNSQVTNALISTY 236
Query: 391 GRAGLIEEALE-MIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
++G +E A M + M +V ++ LL G G++E A
Sbjct: 237 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESA 278
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 238/432 (55%), Gaps = 4/432 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
+ ALS+F N+P + S+N +I + A+ FS+M + S + PD ++ +L
Sbjct: 244 MDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLS 303
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD--V 177
AC+ L S+ + +H+ +L+ V N+L+ +Y + +A+ + + + D V
Sbjct: 304 ACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNV 363
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+S L++GYVK GD+ HAR++FD M RD V+W ++ GY Q+ +EA++LF M+
Sbjct: 364 ISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRS 423
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+P++ + + LS CA L LE GK IH + S +S +V YA+ G + A
Sbjct: 424 GPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWA 483
Query: 298 IEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+F+ K TW +M+V LA HGLG ++ F M+ +KPD +T +G L C+H
Sbjct: 484 RRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTH 543
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
G VDE ++ F +++ +G+ E+ HY CM DLL RAGL EA E I++MP+ D W
Sbjct: 544 VGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWG 603
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CR+H N ++AE AAE ++ + P + G Y L++VY+ RW D KI +
Sbjct: 604 SLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKS 663
Query: 477 IKKNAGCSLIQL 488
+KK G S +
Sbjct: 664 VKKETGFSWTHI 675
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 49/349 (14%)
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR-----LRDAQELFDE 171
LL+ C + + IH++ +K G + ++ N+L+ Y R+A+ LFDE
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 172 I--LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
I R+V + N+L+ Y K+G LA AR +F MP RD VSW +V G + + EAI+
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+F +M+ + P L + LS+CA G+ +H ++ + ++ +++ Y
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYG 208
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAM-------------------------------LVG 318
KCG TA +FE E+++ +WNAM + G
Sbjct: 209 KCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAG 268
Query: 319 LAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
+GL +L +FSRM+ + + PD TI L C++ G+V +++ Y +
Sbjct: 269 YNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVH-----AYILR 323
Query: 378 KELKHYGCMADLL----GRAGLIEEALEMIKKMPMGG-DVFVWSGLLGG 421
+ + G + + L ++G +E A ++++ M +V ++ LL G
Sbjct: 324 SRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEG 372
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 183/421 (43%), Gaps = 39/421 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A ++F +P S+ ++ A+ +F M T + P ++ +L +
Sbjct: 112 LADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSS 171
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + + +HS V+KLG V V NS++++Y A+ +F+ + R V S
Sbjct: 172 CAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSW 231
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-I 239
N ++ G + A LF+ MP R VSW ++AGY Q+ +A+ F M+ +
Sbjct: 232 NAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTM 291
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT--- 296
PD + S LSACA LG + GK +H YI +++ ++ L+ YAK G +
Sbjct: 292 APDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARG 351
Query: 297 ------------------------------AIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
A E+F+ +++ W AM+VG +G
Sbjct: 352 VMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHND 411
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF-DEMESVYGVSKELKHYGC 385
++ F MI + +P+ T+ L C+ ++ +++ + S+ S + +
Sbjct: 412 EAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSN--S 469
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKP 443
+ + R+G + A + ++ + W+ ++ HG E A E +++ +KP
Sbjct: 470 IVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKP 529
Query: 444 E 444
+
Sbjct: 530 D 530
>gi|224075377|ref|XP_002304609.1| predicted protein [Populus trichocarpa]
gi|222842041|gb|EEE79588.1| predicted protein [Populus trichocarpa]
Length = 431
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 251/433 (57%), Gaps = 11/433 (2%)
Query: 60 PLSYAL-SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
PLS+ L S IP S YNT + A SSP A+ L++ M SIP D +S F L
Sbjct: 4 PLSHFLKSTKWQIPRKS---YNTWVLAIKNASSPHKALQLYTHMHRQSIPFDTFSILFTL 60
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
++C+ L + ++ +HS ++KLGF V+V L+H Y V A +LFDE+ R++V
Sbjct: 61 KSCTHLKNLTIIHHLHSHIIKLGFNTHVYVSTCLLHAYAVM-SFDQACDLFDEMPQRNIV 119
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DL 237
+ NT+I GY ++G + AR LF+ MP RDA SW ++ Y + ++ + F MM +
Sbjct: 120 TWNTMITGYSRSGSINKARSLFEAMPVRDAASWSAMITCYINNGFRDQGLSFFQEMMANE 179
Query: 238 DIKPDNIALVSALSACARLGELE--QGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ KPD + + S LS CA +G L GK++H ++ N ++ + T LVD YAKCG+
Sbjct: 180 NPKPDQVTVGSVLSGCAHMGSLGLLAGKSVHGFVVKNGWELNVDIGTLLVDMYAKCGFFK 239
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+ +F QE+N+ TW A++ G A HG + L F M EA ++P+ +T G L C+
Sbjct: 240 NAVWVFVLMQERNVSTWTALICGAAQHGFCQEVLSLFKMMQEAGVRPNEMTFTGILNACA 299
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
GL++E RK F ++ G+ ++HYGCM D+ G+AGL+EEA E+IK+M ++ +W
Sbjct: 300 RKGLIEEGRKYFKMIKET-GLEPRIQHYGCMVDMFGKAGLLEEAYEVIKEMEFEPNIVIW 358
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMK-LKPE-DGGVYKVLADVYANADRWEDVVKIRRSLD 473
L C++H +IA+ V++ +KPE DGG+Y +++D+Y +W+D ++R +
Sbjct: 359 GSFLSACKMHKQFDIADRVIGQVLRDIKPENDGGIYSLVSDLYVLNKKWDDAERVRNLVL 418
Query: 474 AGKIKKNAGCSLI 486
++K G S I
Sbjct: 419 NQNVRKARGSSCI 431
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/478 (32%), Positives = 261/478 (54%), Gaps = 44/478 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+K + QIHA + GL ++T +L S + P+SY +F +IP
Sbjct: 32 LKPLQQIHARIIITGLGRTRS--LITKLL----------SFAYAAASPISYTRRLFFSIP 79
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P TF ++++I + FS P +++ + +M +I Y+F ++++ + L + S+ +T
Sbjct: 80 KPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGET 139
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
IH V G+ D +V +L + Y K+G
Sbjct: 140 IHCHVYICGYGLDAYVQAAL-------------------------------VSFYAKSGH 168
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ AR++FD+MP + V+W ++++GY Q+ +EA++LF M DL +KPD+ VS LSA
Sbjct: 169 VMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSA 228
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA++G + G +H YI N ++ L T L++ Y++CG ++ A E+F+S +EKN+ W
Sbjct: 229 CAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAW 288
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
AM+ G MHG G ++ F+ M +P+ VT + L C+HAGLVDE R++F M+
Sbjct: 289 TAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQ 348
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM-PMGGDVFVWSGLLGGCRIHGNVEIA 431
YG+ ++H CM D+LGRAG + EA + IK P VW+ +LG C++H N ++
Sbjct: 349 EYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLG 408
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
AEH++ ++PE+ G Y +L+++YA A R + V KIR + ++KK G S I ++
Sbjct: 409 VEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVD 466
>gi|356564579|ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 181/577 (31%), Positives = 287/577 (49%), Gaps = 109/577 (18%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L +K+C T+KQ QIHAH L G FL P I +L+ +T ++ +++
Sbjct: 6 LITLMKKCSTVKQAKQIHAHILINGFTFLRPLLIHRMLLWDVTNYRTMAN---------- 55
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA S+ +++ P +FS+ +IR + AV L+ QM S+ P ++ L++C+
Sbjct: 56 YAYSMLHHLHIPDSFSWGCVIRFFSQKCLFTEAVSLYVQMHRTSLCPTSHAVSSALKSCA 115
Query: 123 Q----LCSHSLAQTIH------------------SQVLKLGFICDVF---------VLNS 151
+ LC S+ +H S++ +G VF NS
Sbjct: 116 RIHDMLCGMSIHGQVHVFGFNTCVYVQTALLDLYSKIGDMGTARKVFDEMANKSVVSWNS 175
Query: 152 LMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD------------------- 192
L+ Y L +AQ LF EI +DV+S N++I GY KAG+
Sbjct: 176 LLSGYVKAGNLDEAQYLFSEIPGKDVISWNSMISGYAKAGNVGQACTLFQRMPERNLSSW 235
Query: 193 ------------LAHARQLFDRMPFRDAVSWGTLVAGY---------------------- 218
L AR+ FD MP R+ VSW T++AGY
Sbjct: 236 NAMIAGFIDCGSLVSAREFFDTMPRRNCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLL 295
Query: 219 ---------AQSDQCEEAIQLFCNMMDLDI--KPDNIALVSALSACARLGELEQGKNIHR 267
AQ+ + +EA++LF +M+ DI PD + L S +SAC++LG+LE I
Sbjct: 296 SYNAMIACYAQNSKPKEALELFNDMLKQDIYVHPDKMTLASVISACSQLGDLEHWWWIES 355
Query: 268 YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRL 327
++ I +D L+T L+D YAKCG I+ A E+F + ++++L ++AM+ G ++G
Sbjct: 356 HMNDFGIVLDDHLATALIDLYAKCGSIDKAYELFHNLRKRDLVAYSAMIYGCGINGKASD 415
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA 387
++ F +M+ I P+ VT G L +HAGLV++ + F+ M+ YG+ + HYG M
Sbjct: 416 AIKLFEQMLAECIGPNLVTYTGLLTAYNHAGLVEKGYQCFNSMKD-YGLVPSIDHYGIMV 474
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGG 447
DL GRAG ++EA ++I MPM + VW LL CR+H NVE+ E A +H +KL+ + G
Sbjct: 475 DLFGRAGYLDEAYKLILNMPMQPNAGVWGALLLACRLHNNVELGEIAVQHCIKLETDTTG 534
Query: 448 VYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+L+ +YA ++W+D K+R+ ++ K GCS
Sbjct: 535 YCSLLSSIYATVEKWDDAKKLRKGMEG---KDFTGCS 568
>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
Length = 685
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/418 (38%), Positives = 240/418 (57%), Gaps = 8/418 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ I S+ T+I + A+V +++M + P LL A
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 314
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ S +H ++K GF C F+ +++H Y V + ++ A + F+ + + S
Sbjct: 315 SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DI 239
N LI G+VK G + AR++FD+ +D SW +++GYAQS + A+ LF M+ +
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD I +VS SA + LG LE+GK H Y+ + I + L+ ++D YAKCG I TA+
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 300 IFESSQEKNLFT-----WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
IF Q KN+ + WNA++ G A HG +L+L +S + IKP+ +T +G L C
Sbjct: 495 IFH--QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
HAGLV+ + F+ M+S +G+ ++KHYGCM DLLG+AG +EEA EMIKKMP+ DV +
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
W LL R HGNVEIAE AA + + P GG +L++VYA+A RWEDV +R +
Sbjct: 613 WGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEM 670
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 199/402 (49%), Gaps = 35/402 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL +F+ +P S SY T+I+ + + A+ LF +MR + I + + ++ ACS
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + S +KL VFV +L+H+YC+ L+DA++LFDE+ R++V+ N +
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
++GY KAG + A +LFD++ +D VSWGT++ G + +Q +EA+ + M+ +KP
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA-------------- 289
+ +V LSA AR +G +H I FL ++ FYA
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 290 -----------------KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
K G + A E+F+ + +K++F+WNAM+ G A +L+L F
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 333 SRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
MI +++KPD +T++ S G ++E ++ D + + + + D+
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAIIDMYA 484
Query: 392 RAGLIEEALEMI--KKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G IE AL + K + W+ ++ G HG+ ++A
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 4/253 (1%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L +C+ + + IH +VLK G + ++ NS++++Y L DA+ +F + D
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
S N ++DGYV++ L A +LFD MP R VS+ TL+ GYAQ++Q EA++LF M +L
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
I + + L + +SAC+ LG + + + ++ F+ST L+ Y C + A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++F+ E+NL TWN ML G + GL + F ++ E I G I GC
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI----DGCLRK 283
Query: 358 GLVDEARKLFDEM 370
+DEA + EM
Sbjct: 284 NQLDEALVYYTEM 296
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 72/244 (29%)
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC------------- 291
ALVSAL +CA ++ G+ IH + + + + ++ +++ YAKC
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 292 -------------GYINT-----AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
GY+ + A+++F+ E++ ++ ++ G A + ++ F
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 334 RMIEARIKPDGVTILGALVGCSHAG----------------------------------- 358
M I + VT+ + CSH G
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+ +ARKLFDEM + L + M + +AGLIE+A E+ ++ D+ W +
Sbjct: 223 CLKDARKLFDEMP-----ERNLVTWNVMLNGYSKAGLIEQAEELFDQIT-EKDIVSWGTM 276
Query: 419 LGGC 422
+ GC
Sbjct: 277 IDGC 280
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 270/515 (52%), Gaps = 49/515 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
IK ++++H+ + L + P AI + S+ + + S+ N+
Sbjct: 51 IKTLNKLHSKIVINEHLRIDPT-------LAIKLMRAYSAQGETSVARYIFDRSLEKNVV 103
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+ +N +IR++ + + A+ +F M + + PD Y+FP +L+ACS L + +
Sbjct: 104 F-----FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG- 191
+H ++K+G ++F+ N+L+ +Y LR+A+++ D++ YRDVVS N+++ GY ++G
Sbjct: 159 VHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218
Query: 192 ------------------------------------DLAHARQLFDRMPFRDAVSWGTLV 215
++ + +F+RM ++ +SW ++
Sbjct: 219 FDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI 278
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
A Y + EA+ LF M + +KPD + + S L AC L L G+ +H+YIE ++
Sbjct: 279 AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQ 338
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L L+D YAKCG + A ++F+ + +++ +W +M+ G G ++ F++M
Sbjct: 339 PNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKM 398
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
+++ PD + + L CSH GL+D+ R F M YG+ ++H+ CM DL GRAG
Sbjct: 399 LDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGE 458
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+EEA IK+MPM + VW LL CR+H ++I AA+ + +L P+ G Y +L+++
Sbjct: 459 VEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNI 518
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
YA A W+DV+ +R ++ IKK G S ++LNG
Sbjct: 519 YAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNG 553
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 259/487 (53%), Gaps = 16/487 (3%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + C T ++ ++HA L GLL + + + A + L +
Sbjct: 294 SLLTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAA-----------SGRLDLS 342
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
L++ P+ Y + I AH+ L A+ L S M + P ++ L AC L
Sbjct: 343 LALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGL 402
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD-VVSCNTL 183
S + +H KL D +V +L+ +Y A+ LFD++L VVS +
Sbjct: 403 ---SPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAM 459
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ Y G L AR LFD +P +D V W ++ GY Q + EA++LF M+ ++PD
Sbjct: 460 LTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDE 519
Query: 244 IALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ +V LSA A+LG +E GK +H Y++ ++++ + T L+D Y KCG + A+++F
Sbjct: 520 VTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFH 579
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+K++ WNAM+ G AMHG R +L F + E + P +T +G L CSH+G+V+E
Sbjct: 580 GIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEE 639
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R+ F ME YG+ +++HYGCM DLLGRAGLI+EA +++ M + D +W LL C
Sbjct: 640 GREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAAC 699
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R+H N+ + + A++++ + G+Y +L+++YA W +V ++R + A I+K G
Sbjct: 700 RLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPG 759
Query: 483 CSLIQLN 489
CS I+++
Sbjct: 760 CSSIEID 766
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 266/512 (51%), Gaps = 27/512 (5%)
Query: 3 LNNFIKRC---KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAI--TTFKPISS----- 52
L + +++C K++KQ IH H G F P +L+ L + KPI +
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITG--FKRPNTLLSNHLIGMYMKCGKPIDACKVFD 106
Query: 53 --------------ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVL 98
+ + L A +F+++P S+NT++ + + A+
Sbjct: 107 QMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 99 FSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV 158
F ++R I + +SF LL AC + L Q H QVL GF+ +V + S++ Y
Sbjct: 167 FKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
++ A+ FDE+ +D+ TLI GY K GD+ A +LF MP ++ VSW L+AGY
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGY 286
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
+ + A+ LF M+ + +KP+ S L A A + L GK IH Y+ +R ++
Sbjct: 287 VRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNA 346
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
+++ L+D Y+K G + + +F +K + WN M+ LA HGLG +L MI+
Sbjct: 347 IVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIK 406
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
R+ P+ T++ L CSH+GLV+E + F+ M +G+ + +HY C+ DLLGRAG +
Sbjct: 407 FRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
E + I++MP D +W+ +LG CRIHGN E+ + AAE ++KL PE Y +L+ +YA
Sbjct: 467 ELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYA 526
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ +WE V K+R + ++ K S I++
Sbjct: 527 DHGKWELVEKLRGIMKKRRVNKEKAVSWIEIE 558
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 159/378 (42%), Gaps = 33/378 (8%)
Query: 81 TIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKL 140
+++ H + AV + I F LL+ C S + IH +
Sbjct: 16 SLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 141 GFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
GF + + N L+ +Y + DA ++FD++ R++ S N ++ G+VK+G L AR +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVV 135
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
FD MP RD VSW T+V GYAQ EA+ F + IK + + L+AC + +L
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI--------------------- 298
+ + H + + + LS ++D YAKCG + +A
Sbjct: 196 QLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGY 255
Query: 299 ----------EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
++F EKN +W A++ G G G L+L F +MI R+KP+ T
Sbjct: 256 AKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFS 315
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L + + +++ M V + D+ ++G +E + + +
Sbjct: 316 SCLCASASIASLRHGKQIHGYMIRT-NVRPNAIVTSSLIDMYSKSGSLEASERVFRICYD 374
Query: 409 GGDVFVWSGLLGGCRIHG 426
D +W+ ++ HG
Sbjct: 375 KQDCVLWNTMISALAQHG 392
>gi|326530063|dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 237/390 (60%), Gaps = 10/390 (2%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQE 167
P +FPFL RA ++L S LA ++H+ L+LG + D++V NSL+H+Y A+
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHAHPLRLGLLPWDLYVANSLVHMYAACALPDLARR 117
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
LFDEI ++VS N L+DGY K DL AR +F+RMP RD VSW ++ G + + EA
Sbjct: 118 LFDEIPRPNLVSWNALLDGYAKCRDLLSARCVFNRMPQRDVVSWSAMIDGCVKCGEHREA 177
Query: 228 IQLFCNMMDL-----DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
+ LF MM+ ++ +++ +VS L ACA LG+L +G+ +HRY++ + ++ L+T
Sbjct: 178 LALF-EMMEAAGAGNGVRANDVTMVSVLGACAHLGDLGRGRQMHRYLQEHGFLLNLRLAT 236
Query: 283 GLVDFYAKCGYINTAIEIFESS--QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
LVD YAKCG I+ A+E+F + ++ WNA++ GLA+HGL S+ F M + +
Sbjct: 237 SLVDMYAKCGAISEALEVFRAVPVTTTDVLIWNAVIGGLAVHGLSMESVEIFQEMQNSGV 296
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
PD +T L L C H GLV EA +LF +E V G+ ++HY C+ D+LGRAG +EEA
Sbjct: 297 VPDEITYLVLLSACVHGGLVGEAWRLFRSLE-VQGLRPHVEHYACLVDVLGRAGHLEEAY 355
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANAD 460
++K MPM +V V LL C +HG VE+ E +++L+P+ G Y L+++YA A
Sbjct: 356 GVVKSMPMEPNVSVLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAIAR 415
Query: 461 RWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
RW++ K R+ ++ +KK G S I + G
Sbjct: 416 RWQEAKKARKVMEERGVKKIPGFSEIDVGG 445
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 142/340 (41%), Gaps = 27/340 (7%)
Query: 19 IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFS 78
+HAH L GLL LY + + +A + A +F+ IP P+ S
Sbjct: 82 LHAHPLRLGLLPWD--------LYVANSLVHMYAACALP----DLARRLFDEIPRPNLVS 129
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N ++ + L+A +F++M D S+ ++ C + H A + +
Sbjct: 130 WNALLDGYAKCRDLLSARCVFNRMPQ----RDVVSWSAMIDGCVKCGEHREALALFEMME 185
Query: 139 KLGF--------ICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
G + V VL + H+ + + + L + ++ +L+D Y K
Sbjct: 186 AAGAGNGVRANDVTMVSVLGACAHLGDLGRGRQMHRYLQEHGFLLNLRLATSLVDMYAKC 245
Query: 191 GDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
G ++ A ++F +P D + W ++ G A E++++F M + + PD I +
Sbjct: 246 GAISEALEVFRAVPVTTTDVLIWNAVIGGLAVHGLSMESVEIFQEMQNSGVVPDEITYLV 305
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES-SQEK 307
LSAC G + + + R +E+ +R LVD + G++ A + +S E
Sbjct: 306 LLSACVHGGLVGEAWRLFRSLEVQGLRPHVEHYACLVDVLGRAGHLEEAYGVVKSMPMEP 365
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
N+ A+L +HG L V ++++ + DG I
Sbjct: 366 NVSVLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYI 405
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 254/485 (52%), Gaps = 42/485 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I +C +++++ QI A+ + + +S + + F SPT +SYA
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVS-------FVAKLINF----CTESPTESSMSYAR 83
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F + P +N++ R ++ F++PL LF ++ I PD Y+FP LL+AC+
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + +H +KLG +V+V C TLI+
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYV-------------------------------CPTLIN 172
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y + D+ AR +FDR+ V + ++ GYA+ ++ EA+ LF M +KP+ I
Sbjct: 173 MYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
L+S LS+CA LG L+ GK IH+Y + + ++T L+D +AKCG ++ A+ IFE +
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+ W+AM+V A HG S++ F RM ++PD +T LG L CSH G V+E RK
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F +M S +G+ +KHYG M DLL AG +E+A E I K+P+ +W LL C H
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSH 412
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+++AE +E + +L GG Y +L+++YA +WE V +R+ + K K GCS
Sbjct: 413 NNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSS 472
Query: 486 IQLNG 490
I++N
Sbjct: 473 IEVNN 477
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 126/325 (38%), Gaps = 45/325 (13%)
Query: 2 TLNNFIKRCKTIKQIHQ-IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
T + +K C K + + H L+ L ++ T++ T + + SA
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARX----- 185
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+F+ I P YN +I + + P A+ LF +M+ + P+ + +L +
Sbjct: 186 ------VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS 239
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L S L + IH K F V V +L+ ++ L DA +F+++ Y+D +
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW 299
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ +I Y G + E+++ +F M +++
Sbjct: 300 SAMIVAYANHG-------------------------------KAEKSMLMFERMRSENVQ 328
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD I + L+AC+ G +E+G+ + V S G +VD + G + A E
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYE 388
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHG 323
+ W +L + H
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHN 413
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 266/512 (51%), Gaps = 25/512 (4%)
Query: 2 TLNNFIKRCKTIKQI---HQIHAHFLTKGLLFLSPCHILTTILY--------AITTFK-- 48
TL N + C + ++H+ + GL P +Y A T F+
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERM 225
Query: 49 PISSASSPTT--------DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
P+ S SS + A S+F ++P S S+N +I + A+ LFS
Sbjct: 226 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFS 285
Query: 101 QM-RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
+M S+ PD ++ +L AC+ L + + + +H+ +L+ + V N+L+ Y
Sbjct: 286 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 345
Query: 160 HRLRDAQELFDEILYRD--VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
+ +A+ + D+ + D V+S L++GYVK GD+ AR++F M RD V+W ++ G
Sbjct: 346 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 405
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
Y Q+ + +EAI LF +M+ +P++ L + LS CA L L+ GK IH + +
Sbjct: 406 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERS 465
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
S +S ++ YA+ G A +F+ K TW +M+V LA HG G ++ F M+
Sbjct: 466 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 525
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
A ++PD +T +G L CSHAG V+E ++ +D++++ + ++ E+ HY CM DLL RAGL
Sbjct: 526 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 585
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
EA E I++MP+ D W LL CR+H N E+AE AAE ++ + P + G Y +A+VY
Sbjct: 586 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 645
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ RW D +I ++ ++K G S +
Sbjct: 646 SACGRWSDAARIWKARKEKAVRKETGFSWTHI 677
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 178/419 (42%), Gaps = 37/419 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F +P S+ ++ A+ M P ++ +L +
Sbjct: 114 LADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSS 173
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + ++ + +HS V+KLG V V NS++++Y A +F+ + R V S
Sbjct: 174 CAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSW 233
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDI 239
N ++ G + A LF+ MP R VSW ++AGY Q+ +A++LF M+ + +
Sbjct: 234 NAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 293
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + S LSACA LG + GK +H YI ++ +S ++ L+ YAK G + A
Sbjct: 294 APDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARR 353
Query: 300 IFESSQEKNL----FT-----------------------------WNAMLVGLAMHGLGR 326
I + S E +L FT W AM+VG +G
Sbjct: 354 IMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRND 413
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF-DEMESVYGVSKELKHYGC 385
++ F MI +P+ T+ L C+ +D +++ + S+ S + +
Sbjct: 414 EAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSN--A 471
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
+ + R+G A M ++ + W+ ++ HG E A E +++ E
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVE 530
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 165/362 (45%), Gaps = 48/362 (13%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR----LRDAQELF 169
+ LL+ C + + IH++ +K G + ++ N+L+ Y LRDA+ LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 170 DEI--LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
DEI R+V + N+L+ + K+G LA AR +F MP RDAVSW +V G ++ + EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
I+ +M P L + LS+CA G+ +H ++ + ++ +++
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 288 YAKCGYINTAIEI-------------------------------FESSQEKNLFTWNAML 316
Y KCG TA + FES +++ +WNAM+
Sbjct: 209 YGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMI 268
Query: 317 VGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
G +GL +L FSRM+ E+ + PD TI L C++ G V +++ Y
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH-----AYI 323
Query: 376 VSKELKHYGCMADLL----GRAGLIEEALE-MIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+ E+ + + + L ++G +E A M + M +V ++ LL G G++E
Sbjct: 324 LRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMES 383
Query: 431 AE 432
A
Sbjct: 384 AR 385
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 245/432 (56%), Gaps = 7/432 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P + S+N++I + A++LF +M PD + ++ AC+
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAG 264
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLN-SLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + + +H+ ++K + D VLN +L+ +Y R +A+ +FD + R +VS +
Sbjct: 265 LAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETS 324
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY K+ ++ A+ +F +M ++ ++W L+A YAQ+ + EEAI+LF + I P
Sbjct: 325 ILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVD------SFLSTGLVDFYAKCGYINT 296
+ + L+AC + +L+ G+ H ++ R D F+ LVD Y K G I+
Sbjct: 385 HYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
++FE ++ +WNAM+VG A +G + +L F RM+ + PD VT++G L C H
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLVDE R+ F M +G++ HY CM DLLGRAG ++EA E+I MPM D +W+
Sbjct: 505 SGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWA 564
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG CR+H NVE+ E A + +L P++ G Y +L+++YA +W +V ++RRS+
Sbjct: 565 SLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRG 624
Query: 477 IKKNAGCSLIQL 488
+ K GCS I++
Sbjct: 625 VSKQPGCSWIEI 636
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 166/354 (46%), Gaps = 9/354 (2%)
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
LLR+ L S A+ H+++LK + F+LN+L+ Y RLRDA+ +FDEI R+
Sbjct: 26 LLRSAPNL---SGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRN 82
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQ--CEEAIQLFCNM 234
S N L+ Y + G AR LF+ +P D S+ +VA A+ + +A++ M
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAM 142
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
D + + SALSACA + G+ +H + + D + + LVD YAKC
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERP 202
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A +F++ E+N+ +WN+++ +G +L+ F M+ A PD VT+ + C
Sbjct: 203 EDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSAC 262
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ E R++ M + ++ + D+ + G EA + MP +
Sbjct: 263 AGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP-SRSIVS 321
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
+ +L G NVE A+ +++ ++ + VL YA E+ +++
Sbjct: 322 ETSILTGYAKSANVEDAQVVFSQMVE---KNVIAWNVLIAAYAQNGEEEEAIRL 372
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 164/401 (40%), Gaps = 77/401 (19%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF--------------------- 99
L A +F+ IP +TFSYN ++ A+ P A LF
Sbjct: 68 LRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARH 127
Query: 100 ------------SQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVF 147
+ M + YSF L AC+ + +H V + DV
Sbjct: 128 GRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVH 187
Query: 148 VLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRD 207
+ ++L+ +Y R DA+ +FD + R+VVS N+LI Y + G +
Sbjct: 188 IRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVG------------- 234
Query: 208 AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHR 267
EA+ LF MM PD + L S +SACA L +G+ +H
Sbjct: 235 ------------------EALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHA 276
Query: 268 Y-IELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
+ ++ +++R D L+ LVD YAKCG A IF+S +++ + ++L G A
Sbjct: 277 HMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVE 336
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME------SVYGVSKEL 380
+ V FS+M+E + V I + G +EA +LF +++ + Y L
Sbjct: 337 DAQVVFSQMVEKNVIAWNVLI----AAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVL 392
Query: 381 KHYGCMADL-LGRAGLIEEALEMIK-KMPMGGDVFVWSGLL 419
G +ADL LG+ + E + DVFV + L+
Sbjct: 393 NACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLV 433
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 251/432 (58%), Gaps = 16/432 (3%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA +F+ IP P+ +N++ R + S +F +M ++ +
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQSESYRE---IFCEMFERNV----------VAW 47
Query: 121 CSQLCSHSLAQTIHS--QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
S + + L+ + S ++ L DV + N ++ Y + +A++LF E+ RDV+
Sbjct: 48 TSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVM 107
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DL 237
NT++ GY G++ LF+ MP R+ SW L+ GYA + E + F M+ +
Sbjct: 108 FWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSES 167
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
D+ P++ LV+ LSACARLG L+ GK +H Y E + ++ + ++ L+D YAKCG I A
Sbjct: 168 DVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENA 227
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
I +F K+L +WN ++ GLAMH G +L F +M A KPDG+T +G L C+H
Sbjct: 228 ISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHM 287
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLV++ F M Y + +++HYGCM D+L RAG +E+A+ ++KMP+ D +W+G
Sbjct: 288 GLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAG 347
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG CRI+ NVE+AE A + +++L+P++ Y +L+++Y +A RWEDV +++ ++
Sbjct: 348 LLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGF 407
Query: 478 KKNAGCSLIQLN 489
KK GCSLI++N
Sbjct: 408 KKLPGCSLIEVN 419
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 244/432 (56%), Gaps = 7/432 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P + S+N++I + A+VLF +M PD + ++ AC+
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAG 264
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLN-SLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + + +H+ ++K + D VLN +L+ +Y R +A+ +FD + R VVS +
Sbjct: 265 LAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETS 324
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY K+ ++ A+ +F +M ++ ++W L+A YAQ+ + EEAI+LF + I P
Sbjct: 325 ILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVD------SFLSTGLVDFYAKCGYINT 296
+ + L+AC + L+ G+ H ++ R D F+ LVD Y K G I+
Sbjct: 385 HYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
++FE ++ +WNAM+VG A +G + +L F RM+ + PD VT++G L C H
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLVDE R+ F M +G++ HY CM DLLGRAG ++EA E+IK MP D +W+
Sbjct: 505 SGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWA 564
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG CR+H NVE+ E A + +L PE+ G Y +L+++YA +W DV ++RRS+
Sbjct: 565 SLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRG 624
Query: 477 IKKNAGCSLIQL 488
+ K GCS I++
Sbjct: 625 VSKQPGCSWIEI 636
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 162/354 (45%), Gaps = 9/354 (2%)
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
LLR+ L A+ H VLK + F+LN+L+ Y RLR+A+ +FD I R+
Sbjct: 26 LLRSAPSLPG---ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRN 82
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQ--CEEAIQLFCNM 234
S N L+ Y + G AR LF+ +P D S+ +VA A+ + +A++ M
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAM 142
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
D + + SALSACA +L G+ +H + + D + T LVD YAKC
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERP 202
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A +F++ E+N+ +WN+++ +G +LV F M+ PD VT+ + C
Sbjct: 203 VDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSAC 262
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ E R++ M + ++ + D+ + G EA + MP V
Sbjct: 263 AGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP-SRSVVS 321
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
+ +L G NVE A+ +++ ++ + VL YA E+ +++
Sbjct: 322 ETSILAGYAKSANVEDAQVVFSQMVE---KNVIAWNVLIAAYAQNGEEEEAIRL 372
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 150/322 (46%), Gaps = 23/322 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLR 119
L A +F+ IP +TFSYN ++ A+ P A LF +IP PD S+ ++
Sbjct: 68 LREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFE-----AIPDPDQCSYNAVVA 122
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLN-----SLMHVYCVFHRLRDAQELFDEILY 174
A L H + D FVLN S + LR +++ +
Sbjct: 123 A---LARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVAR 179
Query: 175 R----DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
DV L+D Y K AR++FD MP R+ VSW +L+ Y Q+ EA+ L
Sbjct: 180 SPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVL 239
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRY-IELNQIRVDSFLSTGLVDFYA 289
F MM PD + L S +SACA L +G+ +H + ++ +++R D L+ LVD YA
Sbjct: 240 FVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYA 299
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG A IF+S +++ + ++L G A + V FS+M+E + V I
Sbjct: 300 KCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLI-- 357
Query: 350 ALVGCSHAGLVDEARKLFDEME 371
+ G +EA +LF +++
Sbjct: 358 --AAYAQNGEEEEAIRLFVQLK 377
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 257/486 (52%), Gaps = 41/486 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+KRC I + Q+HA F+ L S + + A S + ++YA
Sbjct: 37 LLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVL---------AKCAHSGWENSMNYAA 87
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
SIF I P TF + T+IR + S A+ +++M I PD +++P LL+AC++L
Sbjct: 88 SIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLK 147
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + IH V KLG DVFV NS LI+
Sbjct: 148 AIREGKQIHGHVFKLGLEADVFVQNS-------------------------------LIN 176
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNI 244
Y + G++ + +F+++ F+ A SW ++ + E + LF M + ++K +
Sbjct: 177 MYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEES 236
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VSALSACA G L G +IH ++ N ++ + T LVD Y KCG I+ A+ IF+
Sbjct: 237 GMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKM 296
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++N T++AM+ G A+HG G +L FS MI+ ++PD V + L CSH+GLV E R
Sbjct: 297 EKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGR 356
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++F EM V +HYGC+ DLLGRAGL+EEALE I+ +P+ + VW L CR+
Sbjct: 357 RVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRV 416
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H N+E+ + AA+ ++KL + G Y +++++Y+ A W+DV + R + +K+ G S
Sbjct: 417 HQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFS 476
Query: 485 LIQLNG 490
+++ G
Sbjct: 477 TVKVKG 482
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 235/426 (55%), Gaps = 8/426 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ +P S+NT+I + L A LF + S D +++ ++ Q
Sbjct: 142 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWTAMVSGYVQ 197
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A+ + + + + N+++ Y R+ A+ELF+ + ++V S NT+
Sbjct: 198 NGMLDEARRVFDGMPEKNSVS----WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTM 253
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY + GD+A AR FDRMP RD++SW ++AGYAQS EEA+ LF M + +
Sbjct: 254 ITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 313
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S LS CA + LE GK +H + + ++ L+ Y KCG I+ A +FE
Sbjct: 314 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 373
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+EK + +WN M+ G A HG G+ +L+ F M + I PD VT++G L CSH GLVD+
Sbjct: 374 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKG 433
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F M YG++ KHY CM DLLGRAG +++A ++K MP D W LLG R
Sbjct: 434 TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASR 493
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
IHGN E+ E AA+ + +++P++ G+Y +L+++YA + RW DV ++R + +KK G
Sbjct: 494 IHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGY 553
Query: 484 SLIQLN 489
S +++
Sbjct: 554 SWVEVQ 559
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 117/223 (52%), Gaps = 14/223 (6%)
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
N ++ Y R+ DA+ LF+ +++S N ++ GYVK L AR +FDRMP RD V
Sbjct: 96 NGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEV 155
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW T+++GYAQ+ + EA +LF D+ + +S + G L++ + + +
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGM 211
Query: 270 -ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
E N + ++ ++ Y +C ++ A E+FE+ +N+ +WN M+ G A +G +
Sbjct: 212 PEKNSVSWNAIIAG-----YVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQA 266
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
+F RM + D ++ + G + +G +EA LF EM+
Sbjct: 267 RNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMK 305
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 134/267 (50%), Gaps = 21/267 (7%)
Query: 157 CVFHR-LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLV 215
CV +R LR A+ LFD++ RDVVS N ++ GY + G + A+++FD MP ++++SW ++
Sbjct: 40 CVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGML 99
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI-HRYIELNQI 274
A Y Q+ + E+A +LF + D ++ I+ + + L + I R E +++
Sbjct: 100 AAYVQNGRIEDARRLFESKADWEL----ISWNCMMGGYVKRNRLVDARGIFDRMPERDEV 155
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
++ +S YA+ G + A +FE S +++FTW AM+ G +G+ L R
Sbjct: 156 SWNTMISG-----YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGM----LDEARR 206
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
+ + + + V+ + G +D+AR+LF+ M + + + M + G
Sbjct: 207 VFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMP-----CQNVSSWNTMITGYAQNG 261
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGG 421
I +A +MP D W+ ++ G
Sbjct: 262 DIAQARNFFDRMPQ-RDSISWAAIIAG 287
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 208/325 (64%)
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
AQ+LF +I R++V +I GY + G + AR +FD+M +D V W +++GYA+SD+
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
+EA+ LF M IKPD + ++S +SACARLG L++ K IH Y++ N + ++ L
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNAL 121
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
+D YAKCG + A +FE Q +N+ +W +M+ A+HG +L +F +M + IKP+G
Sbjct: 122 IDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNG 181
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
VT +G L CSHAGLV+E R+ F M + + ++ + +HYGCM DL GRA L+ +ALE+++
Sbjct: 182 VTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVE 241
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
MP+ +V +W L+ C+IHG E+ E AA+ V++L+P+ G L+++YA RW+D
Sbjct: 242 TMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQD 301
Query: 465 VVKIRRSLDAGKIKKNAGCSLIQLN 489
V ++R + I K GCS I+LN
Sbjct: 302 VGELRNLMKQRGISKERGCSRIELN 326
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 138/318 (43%), Gaps = 41/318 (12%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF+ + ++ +I + P A+ LFS+M+ I PD + ++ AC++L
Sbjct: 36 IFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGV 95
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
A+ IH V K G + V N+L+ +Y L A+ +F+++ R+V+S ++I+
Sbjct: 96 LDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINA 155
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
+ GD ++ A++ F M D +IKP+ +
Sbjct: 156 FAIHGDASN-------------------------------ALKFFYQMKDENIKPNGVTF 184
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFESSQ 305
V L AC+ G +E+G+ + G +VD + + + A+E+ E+
Sbjct: 185 VGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMP 244
Query: 306 -EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
N+ W +++ +HG L +++E ++PD GALV S+ D
Sbjct: 245 LAPNVVIWGSLMAACQIHGENELGEFAAKQVLE--LEPDHD---GALVQLSNIYAKDRRW 299
Query: 365 KLFDEMESVY---GVSKE 379
+ E+ ++ G+SKE
Sbjct: 300 QDVGELRNLMKQRGISKE 317
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 248/440 (56%), Gaps = 19/440 (4%)
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
PL YA+++F+++ P F ++R L PL LFS++R PFL
Sbjct: 103 PLRYAVAVFSSLSPPDPFLAAALLRFAHLTQPPLETFRLFSRLRCA----HGSDLPFLPF 158
Query: 120 ACSQLCSHSLAQTIHSQV--------LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
A S L + A L GF FV NSL+ Y + A+++FDE
Sbjct: 159 AFSPLAKSAAAARSLHAAASAHAVSLLLGGFDKHRFVENSLISAYVACGDVGAARKVFDE 218
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+L +DV+S +++ Y + D+ A ++F P +D V+W +V GYAQ+ +A++ F
Sbjct: 219 MLVKDVISWTSIVVAYSRIRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAF 278
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M + D ++L A+SACA+LG +++ + E N + + + +GLVD YAKC
Sbjct: 279 EQMAVAGMPIDEVSLTGAISACAQLGAVKRAAWVQEIAERNGLGRNVVVGSGLVDMYAKC 338
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGA 350
G I+ A ++FE +KN++T+++M+VGLA HG + F+ M+ A ++P+ VT +G
Sbjct: 339 GLIDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRADVEPNHVTFIGV 398
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM---P 407
L CSHAG+V E R F +M+ YG+ HY CM DLL R+GL+ EAL+++K M P
Sbjct: 399 LTACSHAGMVKEGRYYFAQMKDRYGILPSADHYACMVDLLARSGLVTEALDLVKSMTVEP 458
Query: 408 MGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
GG VW LLG CRIHGN E+A+ AAEH+ +L+PE G Y +L++ A+A W++V K
Sbjct: 459 HGG---VWGALLGACRIHGNTEVAKIAAEHLFRLEPEGIGNYVLLSNTLASAGEWDEVSK 515
Query: 468 IRRSLDAGKIKKNAGCSLIQ 487
+R+ + +KK+ S +
Sbjct: 516 LRKLMRIRGLKKDPAVSWFE 535
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 266/488 (54%), Gaps = 18/488 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I R + + + ++H + + GL F S +YA + +
Sbjct: 56 IGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYA-------------SLGKIEITHK 102
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLC 125
+F+ +P S+N +I ++ +A+ +F +M S + D + L ACS L
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + + I+ V+ F V + N+L+ ++C L A+ +FD + ++V +++
Sbjct: 163 NLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GYV G + AR LF+R P +D V W ++ GY Q ++ +EA++LF M I+PDN
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LVS L+ CA+ G LEQGK IH YI N++ VD + T LVD YAKCG I TA+E+F +
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E++ +W +++ GLAM+G+ +L + M ++ D +T + L C+H G V E RK
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD---VFVWSGLLGGC 422
+F M + V + +H C+ DLL RAGL++EA E+I KM D V V+ LL
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAA 461
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R +GNV+IAE AE + K++ D + +LA VYA+A+RWEDV +RR + I+K G
Sbjct: 462 RNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPG 521
Query: 483 CSLIQLNG 490
CS I+++G
Sbjct: 522 CSSIEIDG 529
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 66/385 (17%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
PS YN ++++ S + LF ++R + PD ++ P +L++ +L + +
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H +K G D +V NSLM +Y ++ ++FDE+ RDVVS N LI YV G
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A +F RM + ++K D +VS LSAC
Sbjct: 129 EDAIGVFKRMS------------------------------QESNLKFDEGTIVSTLSAC 158
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
+ L LE G+ I+R++ + + + + LVD + KCG ++ A +F+S ++KN+ W
Sbjct: 159 SALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWT 217
Query: 314 AMLVGLAMHGLGRLSLVYFSR-------------------------------MIEARIKP 342
+M+ G G + V F R M A I+P
Sbjct: 218 SMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRP 277
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
D ++ L GC+ G +++ + + + E+ V K + + D+ + G IE ALE
Sbjct: 278 DNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT--ALVDMYAKCGCIETALE 335
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHG 426
+ ++ D W+ L+ G ++G
Sbjct: 336 VFYEIKE-RDTASWTSLIYGLAMNG 359
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 246/428 (57%), Gaps = 5/428 (1%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLC 125
+F+ +P S+N +I ++ +A+ +F +M R ++ D + L ACS L
Sbjct: 87 VFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLK 146
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + + I+ V+ F V N+L+ ++C L A+ +FD + ++V +++
Sbjct: 147 NLEIGERIYRYVVT-EFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVS 205
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GYV G AR+LF+R P +D V W ++ GY Q ++ +EA++LF M I+PDN
Sbjct: 206 GYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFV 265
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LVS L+ CA+ G LEQGK IH YI N++ VD + T LVD YAKCG I TA+ +F +
Sbjct: 266 LVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMK 325
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E++ +W +++ GLA +G+ +L + M ++ D +T + L CSH G V E R+
Sbjct: 326 ERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRR 385
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD---VFVWSGLLGGC 422
+F M + + + +HY C+ DLL RAGL++EA E+I KM D V V+ LL
Sbjct: 386 IFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAA 445
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R +GNV+IAE AE + K++ D + +LA VYA+A+RWEDV +RR + I+K G
Sbjct: 446 RNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPG 505
Query: 483 CSLIQLNG 490
CS I+++G
Sbjct: 506 CSSIEVDG 513
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 157/363 (43%), Gaps = 66/363 (18%)
Query: 96 VVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHV 155
+ LF ++R + PD ++ P +L++ +L + +H +K G D +V NSLM +
Sbjct: 15 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLMGM 74
Query: 156 YCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLV 215
Y ++ ++FDE+ RDVVS N LI YV G A +F RM
Sbjct: 75 YAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMS----------- 123
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
+ ++K D +VS LSAC+ L LE G+ I+RY+ + +
Sbjct: 124 -------------------RESNLKADEGTIVSTLSACSVLKNLEIGERIYRYV-VTEFE 163
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR- 334
+ LVD + KCG ++ A IF+S ++KN+ W +M+ G +G + F R
Sbjct: 164 MSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERS 223
Query: 335 ------------------------------MIEARIKPDGVTILGALVGCSHAGLVDEAR 364
M ARI+PD ++ L GC+ G +++ +
Sbjct: 224 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGK 283
Query: 365 KLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ + E+ V K + + D+ + G IE AL + +M D W+ L+ G
Sbjct: 284 WIHGYIRENRVTVDKVVG--TALVDMYAKCGCIETALGVFYEMKE-RDTASWTSLIYGLA 340
Query: 424 IHG 426
+G
Sbjct: 341 TNG 343
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 41/243 (16%)
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
++ A+S + + LF + + PDN L L + RL ++ +G+ +H Y
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
+ DS++ L+ YA G + ++F+ E+++ +WN ++ HG ++ F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 334 RMI-EARIKPDGVTILGALVGCS----------------------------------HAG 358
RM E+ +K D TI+ L CS G
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEMSVRTGNALVDMFCKCG 180
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+D+AR +FD M K +K + M G +EA E+ ++ P+ DV +W+ +
Sbjct: 181 CLDKARAIFDSMR-----DKNVKCWTSMVSGYVSNGRTDEARELFERSPV-KDVVLWTAM 234
Query: 419 LGG 421
+ G
Sbjct: 235 MNG 237
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F P + ++ + F+ A+ LF M+T I PD + LL C+Q
Sbjct: 216 ARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQ 275
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + IH G+I R+ + D+++ L
Sbjct: 276 TGALEQGKWIH------GYI-------------------RENRVTVDKVV------GTAL 304
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K G + A +F M RD SW +L+ G A + A+ L+ M ++ ++ D+
Sbjct: 305 VDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDD 364
Query: 244 IALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
I V+ L+AC+ G + +G+ I + E ++I+ S + L+D + G ++ A E+ +
Sbjct: 365 ITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELID 424
>gi|297791497|ref|XP_002863633.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309468|gb|EFH39892.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 460
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 267/494 (54%), Gaps = 58/494 (11%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
N I +CK+++ + QIHA +T GL + Y ++ +SS T LSYA
Sbjct: 14 NLIPKCKSLQNLKQIHAQIITIGL---------SHHTYPLSKLLHLSS-----TVCLSYA 59
Query: 65 LSIFNNIPYPSTFSYNTIIRA----HTLFSSPLNAVVLFSQM---RTVSIPPDFYSFPFL 117
LSI IP PS F YNT+I + H + L A L+ Q+ R+ + P+ +++P L
Sbjct: 60 LSILRQIPNPSVFLYNTLISSIVSNHNSTQTHL-AFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 118 LRACS-QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+A + H + +H+ VLK F E + D
Sbjct: 119 FKASGFETKWHRHGRALHAHVLK-----------------------------FIEPVNHD 149
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE---EAIQLFCN 233
L+ Y G+L AR L +R+ D +W TL+A YA S++ E E ++LF
Sbjct: 150 RFVQAALVGFYANCGELREARSLLERIREPDLATWNTLLAAYANSEETESDEEVLKLFVR 209
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M ++P+ ++LV+ + +CA LGE G H Y+ + ++ F+ T L+DFY+KCG
Sbjct: 210 M---QVRPNELSLVALIKSCANLGEFWGGVWAHVYLLKKNLTLNQFVGTSLIDFYSKCGC 266
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
++ A ++F+ E+++ +NAM+ GLA+HG G+ + ++ +I + PD T + +
Sbjct: 267 LSFARQVFDEMSERDISCFNAMIRGLAVHGFGQEGIELYNSLISQGLVPDNATFVVTISA 326
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSH+GLVDE ++F M++VYG+ +++HYGC+ DLLGR+G +EEA E IKKMPM +
Sbjct: 327 CSHSGLVDEGLQIFHSMKTVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPMKPNAT 386
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+W LG +IHG++E E A + ++ L+ E+ G Y +L+++YA +RW DV K R +
Sbjct: 387 LWRSFLGSAQIHGDLERGEIALKQLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMK 446
Query: 474 AGKIKKNAGCSLIQ 487
++ K+ G S I
Sbjct: 447 DHRVNKSPGISTIN 460
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 241/431 (55%), Gaps = 32/431 (7%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ L A +F+ IP + F +N +IRA+ A+ L+ QM + PD ++ PF+L
Sbjct: 107 NSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVL 166
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+ACS L + + IH +V++ G+ DVFV +L
Sbjct: 167 KACSALSTIGEGRVIHERVIRSGWERDVFVGAAL-------------------------- 200
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+D Y K G + AR +FD++ RDAV W +++A YAQ+ +E++ L C M
Sbjct: 201 -----VDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKG 255
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++P LV+ +S+ A + L G+ IH + + + + + T L+D YAKCG + A
Sbjct: 256 VRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVAC 315
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE +EK + +WNA++ G AMHGL +L F RM++ +PD +T +GAL CS
Sbjct: 316 VLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGR 374
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+DE R L++ M ++ ++HY CM DLLG G ++EA ++I++M + D VW L
Sbjct: 375 LLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGAL 434
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+ HGNVE+AE A E +++L+P+D G Y +LA++YA + +WE V ++R+ + IK
Sbjct: 435 LNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIK 494
Query: 479 KNAGCSLIQLN 489
KN CS I++
Sbjct: 495 KNIACSWIEVK 505
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 163/388 (42%), Gaps = 50/388 (12%)
Query: 61 LSYALSIFNNIPY---PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
LS++L++F PY +F+ +I H + S P S P + Y + L
Sbjct: 19 LSFSLNLFPVSPYYFLHQSFA-TQLIPQHKVDSFP-------------SSPSNHYYYASL 64
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L +C + + +H+++ +LG ++ + L++ Y V + LR+A LFD+I
Sbjct: 65 LESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKI----- 119
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
P + W L+ YA + E AI L+ M++
Sbjct: 120 --------------------------PKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEY 153
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+KPDN L L AC+ L + +G+ IH + + D F+ LVD YAKCG + A
Sbjct: 154 GLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDA 213
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+ +++ WN+ML A +G SL M ++P T++ + +
Sbjct: 214 RHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADI 273
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
+ R++ +G K + D+ + G ++ A + +++ V W+
Sbjct: 274 ACLPHGREIHG-FGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERL-REKRVVSWNA 331
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPED 445
++ G +HG A E +MK D
Sbjct: 332 IITGYAMHGLAVEALDLFERMMKEAQPD 359
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 233/427 (54%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ + YNTI+ + + + +M PD + + ACS+
Sbjct: 294 ARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSE 353
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L S + H VL+ G V N+++++Y + A +FD +L + VS N+L
Sbjct: 354 LDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSL 413
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+V+ GD+ A ++F MP D VSW T++ Q +EAI+LF M I D
Sbjct: 414 IAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADK 473
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +V SAC LG L+ K IH YI+ I D L T LVD +A+CG +A+++F
Sbjct: 474 VTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNK 533
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
++++ W A + +AM G G ++ F M++ IKPDGV + L SH GLV++
Sbjct: 534 MVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQG 593
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+F M+ +YG++ + HYGCM DLLGRAGL+ EAL +I M M + +W LL CR
Sbjct: 594 WHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACR 653
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H NV+IA AAE + +L PE G++ +L+++YA+A RW+DV K+R L K G
Sbjct: 654 VHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGS 713
Query: 484 SLIQLNG 490
S I++NG
Sbjct: 714 SSIEING 720
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 181/353 (51%), Gaps = 44/353 (12%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAIT---TFKPISSASSPTTDPLSYA 64
K+CKT+ ++ Q+H+ +TK L P LT ++ + T TF+ + A +
Sbjct: 41 KKCKTMTELKQLHSQ-ITKNGLNHHPLS-LTNLISSCTEMGTFESLEYAQK------ALE 92
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
L I +N + + ++++IR + A+V+F Q+ + PD ++FPF+L AC++
Sbjct: 93 LFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKS 152
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H ++K+GF D+FV NSL+H Y + + +FD++ R+VVS +LI
Sbjct: 153 AALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLI 212
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC-EEAIQLFCNMMDLDIKPDN 243
GY K G C +EA+ LF M+++ I+P++
Sbjct: 213 GGYAKRG--------------------------------CYKEAVSLFFEMVEVGIRPNS 240
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +V +SACA+L +L+ G+ + I ++ V++ + LVD Y KCG I+ A +IF+
Sbjct: 241 VTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDE 300
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+KNL +N ++ GL R L M++ +PD +T+L A+ CS
Sbjct: 301 CVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSE 353
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 187/443 (42%), Gaps = 75/443 (16%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + + S+ ++I + AV LF +M V I P+ + ++ AC++L
Sbjct: 196 VFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQD 255
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L + + + + +L +N+LM N L+D
Sbjct: 256 LQLGEQVCTCIGELEL-----EVNALM--------------------------VNALVDM 284
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y+K G + AR++FD ++ V + T+++ Y + E + + M+ +PD I +
Sbjct: 285 YMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITM 344
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY------------- 293
+SA+SAC+ L ++ GK H Y+ N + + +++ Y KCG
Sbjct: 345 LSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLN 404
Query: 294 ------------------INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ +A +IF + + +L +WN M+ L + + ++ F M
Sbjct: 405 KTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVM 464
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK---HYG-CMADLLG 391
I D VT++G C + G +D A+ + Y K++ H G + D+
Sbjct: 465 QSEGITADKVTMVGVASACGYLGALDLAKWIHG-----YIKKKDIHFDMHLGTALVDMFA 519
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPEDGGVY 449
R G + A+++ KM + DV W+ +G + GN A + +++ +KP DG V+
Sbjct: 520 RCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKP-DGVVF 577
Query: 450 KVLADVYANADRWEDVVKIRRSL 472
L ++ E I RS+
Sbjct: 578 VALLTALSHGGLVEQGWHIFRSM 600
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 270/492 (54%), Gaps = 23/492 (4%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTI--LYAITTFKPISSASSPTTD 59
TL + ++ CK I + IHA I+ T A F+ I S T D
Sbjct: 31 TLISVLRSCKNIAHVPSIHAK-------------IIRTFHDQDAFVVFELIRVCS--TLD 75
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+ YA +F+ + P+ + Y +I + V L+ +M S+ PD Y +L+
Sbjct: 76 SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLK 135
Query: 120 ACS-QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC ++C + IH+QVLKLGF V +M +Y L +A+++FDE+ RD V
Sbjct: 136 ACDLKVC-----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+ +I+ Y + G + A +LF + +D V W ++ G ++ + +A++LF M +
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ + V LSAC+ LG LE G+ +H ++E ++ + +F+ L++ Y++CG IN A
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F ++K++ ++N M+ GLAMHG ++ F M+ +P+ VT++ L CSH G
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 370
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+D ++F+ M+ V+ V +++HYGC+ DLLGR G +EEA I+ +P+ D + L
Sbjct: 371 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 430
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+IHGN+E+ E A+ + + + D G Y +L+++YA++ +W++ +IR S+ I+
Sbjct: 431 LSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
Query: 479 KNAGCSLIQLNG 490
K GCS I+++
Sbjct: 491 KEPGCSTIEVDN 502
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 219/364 (60%), Gaps = 1/364 (0%)
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+L +HS +++ G D V SL+ Y R+ A+ +FD+ +D+ N +I GY
Sbjct: 86 TLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGY 145
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNIAL 246
VK+G+LA AR+LFD MP R+ VSW T++ YAQ Q EA+++F M ++ I+PD +AL
Sbjct: 146 VKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVAL 205
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S LSAC LG ++ G+ +HR++ + L ++D Y K G + A+E+FE +
Sbjct: 206 LSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQ 265
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K++ TW ++ G A+HGLG ++ F RM + P+ VT L L CSH GL D R
Sbjct: 266 KSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWY 325
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M S Y + + ++HYGCM DLLGRAG + EA ++++ MP + +W LL R HG
Sbjct: 326 FKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHG 385
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+ E+ + A H+++L+P + G Y +L+++YA +RW+DV K+R+ + ++ G S I
Sbjct: 386 DAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPGASSI 445
Query: 487 QLNG 490
+++G
Sbjct: 446 EVDG 449
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 36/292 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
L+ A +F+ +P + S+ T+I A+ P+ AV +F +M+ I PD + +L
Sbjct: 151 LACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVLS 210
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC L + L + +H V++ G + ++N+++ +Y +R A E+F+ + + VV+
Sbjct: 211 ACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVVT 270
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
T+I AG+A EAI++F M ++
Sbjct: 271 WTTVI-------------------------------AGFALHGLGLEAIEMFRRMEMENV 299
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTA 297
P+++ ++ LSAC+ +G + G+ + I ++Q R+ + +VD + GY+ A
Sbjct: 300 APNDVTFLAILSACSHVGLTDLGRWYFK-IMVSQYRIKQRVEHYGCMVDLLGRAGYLMEA 358
Query: 298 IEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
++ + K N W A+L HG L +IE G IL
Sbjct: 359 QDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYIL 410
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 252/496 (50%), Gaps = 70/496 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F S+N++I H S A LF +M+ + PD +F +L C
Sbjct: 540 AQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKN 599
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSL--MHVYC--------VFHRL----------- 162
+ L + IH +++ G DV + N+L M++ C VFH L
Sbjct: 600 PEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAM 659
Query: 163 ----------RDAQELFDEIL---YRDVVSC----------------------------- 180
R A ELF ++ ++ V S
Sbjct: 660 IGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGY 719
Query: 181 -------NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
N LI Y K+G + AR++FD+MP RD +SW ++AGYAQ+ A+Q
Sbjct: 720 ELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQ 779
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M + + + + VS L+AC+ LE+GK +H I +++ D + L+ YAKCG
Sbjct: 780 MQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGS 839
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A E+F++ EKN+ TWNAM+ A HGL +L +F+ M + IKPDG T L
Sbjct: 840 LEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSA 899
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C+H+GLV E ++F +ES +G+S ++HYGC+ LLGRAG +EA +I +MP D
Sbjct: 900 CNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAA 959
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LLG CRIHGNV +AE AA + +KL + VY +L++VYA A RW+DV KIRR ++
Sbjct: 960 VWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVME 1019
Query: 474 AGKIKKNAGCSLIQLN 489
I+K G S I+++
Sbjct: 1020 GRGIRKEPGRSWIEVD 1035
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 166/367 (45%), Gaps = 35/367 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +FN +P S+N II + A+ L+ QM++ + P +F LL A
Sbjct: 436 LPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSA 495
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ ++S + IH +L+ G + + N+LM++Y
Sbjct: 496 CTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMY------------------------ 531
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ G + A+ +F+ RD +SW +++AG+AQ E A +LF M ++
Sbjct: 532 -------RRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLE 584
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I S L C LE G+ IH I + +++D L L++ Y +CG + A E+
Sbjct: 585 PDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEV 644
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F S + +N+ +W AM+ G A G R + F +M KP T L C + +
Sbjct: 645 FHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACL 704
Query: 361 DEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
DE +K+ + S Y + + + + ++G + +A ++ KMP D+ W+ ++
Sbjct: 705 DEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMI 761
Query: 420 GGCRIHG 426
G +G
Sbjct: 762 AGYAQNG 768
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 163/344 (47%), Gaps = 35/344 (10%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
YN +I A A + QMR+ + + ++ +L ACS + + IHS +
Sbjct: 353 YNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
++G DV + NSL I Y + GDL AR+
Sbjct: 413 EVGHSSDVQIGNSL-------------------------------ISMYARCGDLPRARE 441
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
LF+ MP RD +SW ++AGYA+ + EA++L+ M +KP + + LSAC
Sbjct: 442 LFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSA 501
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
GK IH I + I+ + L+ L++ Y +CG I A +FE ++ +++ +WN+M+ G
Sbjct: 502 YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAG 561
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL-FDEMESVYGVS 377
A HG + F M + ++PD +T LVGC + ++ R++ +ES G+
Sbjct: 562 HAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES--GLQ 619
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
++ + ++ R G +++A E+ + +V W+ ++GG
Sbjct: 620 LDVNLGNALINMYIRCGSLQDAYEVFHSLRH-RNVMSWTAMIGG 662
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 46/413 (11%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
R +++ + +IHA + G+ P L+ +L I + S S A +F
Sbjct: 94 RKRSLAEAKRIHAQMVEAGV---GPDIFLSNLL--INMYVKCRSVSD--------AHQVF 140
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+P S+N++I + A LF +M+T P ++ +L AC
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ IHS++++ G+ D V NSL+++Y
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQNSLLNMYG------------------------------- 229
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
K DL ARQ+F + RD VS+ T++ YAQ EE I LF M I PD + ++
Sbjct: 230 KCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYIN 289
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L A L++GK IH+ + D + T L + +CG + A + E+ +++
Sbjct: 290 LLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRD 349
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ +NA++ LA HG + + +M + + T L L CS + + +
Sbjct: 350 VVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHS 409
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ V G S +++ + + R G + A E+ MP D+ W+ ++ G
Sbjct: 410 HISEV-GHSSDVQIGNSLISMYARCGDLPRARELFNTMPK-RDLISWNAIIAG 460
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 161/377 (42%), Gaps = 41/377 (10%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ L A +F+ I SYNT++ + + + LF QM + IPPD ++ LL
Sbjct: 232 EDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLL 291
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
D F S++ H+L +E L D+
Sbjct: 292 --------------------------DAFTTPSMLDEGKRIHKL-----AVNEGLNSDIR 320
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
L +V+ GD+A A+Q + RD V + L+A AQ EEA + + M
Sbjct: 321 VGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDG 380
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ + +S L+AC+ L G+ IH +I D + L+ YA+CG + A
Sbjct: 381 VVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAR 440
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
E+F + +++L +WNA++ G A ++ + +M +KP VT L L C+++
Sbjct: 441 ELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSS 500
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLL----GRAGLIEEALEMIKKMPMGGDVFV 414
+ + + +++ + +K G +A+ L R G I EA + + D+
Sbjct: 501 AYSDGKMIHEDI-----LRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGT-RARDIIS 554
Query: 415 WSGLLGGCRIHGNVEIA 431
W+ ++ G HG+ E A
Sbjct: 555 WNSMIAGHAQHGSYEAA 571
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 33/315 (10%)
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
L++ C++ S + A+ IH+Q+++ G D+F+ N L+++Y + DA ++F ++ RD
Sbjct: 88 LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V+S N+LI Y + G A QLF+ M AG+
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQ----------TAGFI----------------- 180
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
P I +S L+AC ELE GK IH I + D + L++ Y KC + +
Sbjct: 181 ----PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPS 236
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A ++F +++ ++N ML A + F +M I PD VT + L +
Sbjct: 237 ARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTT 296
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
++DE +++ ++ G++ +++ +A + R G + A + ++ DV V++
Sbjct: 297 PSMLDEGKRIH-KLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFA-DRDVVVYN 354
Query: 417 GLLGGCRIHGNVEIA 431
L+ HG+ E A
Sbjct: 355 ALIAALAQHGHYEEA 369
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 130/331 (39%), Gaps = 41/331 (12%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF 111
S S TD A +F+ +P S+N +I + A+ QM+ + +
Sbjct: 734 SKSGSMTD----ARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNK 789
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
+SF +L ACS + + +H++++K DV V +L+ +Y L +AQE+FD
Sbjct: 790 FSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDN 849
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
++VV+ N +I+ Y + G + A F
Sbjct: 850 FTEKNVVTWNAMINAYAQHGLASKALDFF------------------------------- 878
Query: 232 CNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYA 289
N MD + IKPD S LSAC G + +G I +E + G LV
Sbjct: 879 -NCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLG 937
Query: 290 KCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+ G A + + W +L +HG L+ + ++ + V +L
Sbjct: 938 RAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVL 997
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKE 379
+ V + AG D+ K+ ME G+ KE
Sbjct: 998 LSNVYAA-AGRWDDVAKIRRVMEG-RGIRKE 1026
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ + A V + C R L + K IH + + D FLS L++ Y KC ++ A +
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F +++ +WN+++ A G + + F M A P +T + L C
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 360 VDEARKLFDEM 370
++ +K+ ++
Sbjct: 199 LEYGKKIHSKI 209
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 237/426 (55%), Gaps = 3/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF-LLRACS 122
A +F IP S+ T+I + +A+ + QM D+ L++AC+
Sbjct: 229 AAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACA 288
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + + Q +H+ +LK GF FV +L+H Y + AQ F S N
Sbjct: 289 RYSAVTEGQQLHTVILKNGFDALAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNA 348
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+ ++ G + AR+LFD MP RD VSW T+++GY Q+ + + A++LF +M++ I+P+
Sbjct: 349 LLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPN 408
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ L SALSA A G L+QGK IH YI +++ LS+GL+D YAKCG I A++ F
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFN 468
Query: 303 SSQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
+K ++ WNAM+ LA+HG +SL FS++ IKP+ +T +G L C HAG V
Sbjct: 469 RVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTV 528
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + F+ M YG+ +KHYGCM DLLGRAG +EEA +++ MPM DV +W +L
Sbjct: 529 TKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILS 588
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
R GNV + E AAE + KL G L+++YA+A W +V +R+ L +++
Sbjct: 589 ASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWTNVSVVRKELQDANLERL 648
Query: 481 AGCSLI 486
G S I
Sbjct: 649 TGRSGI 654
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 38/402 (9%)
Query: 61 LSYALSIFNNIP--YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L A + +P + SY T++ A AV +F M + ++ P+ + +
Sbjct: 92 LDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAVAVFRSMLSENVVPNEATLAGAI 151
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A ++ + + IH L+ V V +L+H Y L A+ LFD + +R+ V
Sbjct: 152 TAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDGMTHRNTV 211
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DL 237
+ N +++GYVKA + A ++F R+P RD VSW TL+ GY +D +A++ + M+ ++
Sbjct: 212 TWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEV 271
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ LV + ACAR + +G+ +H I N +F+ LV FY CG I A
Sbjct: 272 GANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDALAFVQATLVHFYGCCGLIGLA 331
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGR------------------------------- 326
F S + + +WNA+L L +GL R
Sbjct: 332 QMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSD 391
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE-MESVYGVSKELKHYGC 385
++L F M+ I+P+ VT+ AL + +G +D+ + + D M ++ L
Sbjct: 392 MALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLS--SG 449
Query: 386 MADLLGRAGLIEEALEMIKKM-PMGGDVFVWSGLLGGCRIHG 426
+ D+ + G I +A++ ++ V W+ ++ IHG
Sbjct: 450 LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHG 491
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 14/271 (5%)
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVF-HRLRDAQELFDEI 172
PFL+ + + + +H+ K G + +VFV NS++ Y L A +LFDE
Sbjct: 10 PFLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDET 69
Query: 173 L--YRDVVSCNTLIDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAI 228
RD + N+++ +AG L A+ L + MP RDAVS+ TLV +A++ A+
Sbjct: 70 PPPLRDATARNSILAALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAV 129
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF--LSTGLVD 286
+F +M+ ++ P+ L A++A AR G IH + Q +D F ++T LV
Sbjct: 130 AVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFAL--QRALDGFVIVATNLVH 187
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YA + +A +F+ +N TWN ML G + ++ F R+ E D V+
Sbjct: 188 AYAGVLELCSARALFDGMTHRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPE----RDEVS 243
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
L + G A L+ +A K + +M G +
Sbjct: 244 WLTLIDGYICADLISDAMKAYVQMVGEVGAN 274
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 237/426 (55%), Gaps = 3/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF-LLRACS 122
A +F IP S+ T+I + +A+ + QM D+ L++AC+
Sbjct: 229 AAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACA 288
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + + Q +H+ +LK GF FV +L+H Y + AQ F S N
Sbjct: 289 RYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNA 348
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+ ++ G + AR+LFD MP RD VSW T+++GY Q+ + + A++LF +M++ I+P+
Sbjct: 349 LLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPN 408
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ L SALSA A G L+QGK IH YI +++ LS+GL+D YAKCG I A++ F
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFN 468
Query: 303 SSQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
+K ++ WNAM+ LA+HG +SL FS++ IKP+ +T +G L C HAG V
Sbjct: 469 RVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTV 528
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + F+ M YG+ +KHYGCM DLLGRAG +EEA +++ MPM DV +W +L
Sbjct: 529 TKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILS 588
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
R GNV + E AAE + KL G L+++YA+A W +V +R+ L +++
Sbjct: 589 ASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWINVSVVRKELQDANLERL 648
Query: 481 AGCSLI 486
G S I
Sbjct: 649 TGRSGI 654
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 38/402 (9%)
Query: 61 LSYALSIFNNIP--YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L A + +P + SY T++ + AV +F M + ++ P+ + +
Sbjct: 92 LDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSENVVPNEATLAGAI 151
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A ++ + + IH L+ V V +L+H Y L A+ LFD + YR+ V
Sbjct: 152 TAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDGMTYRNTV 211
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DL 237
+ N +++GYVKA + A ++F R+P RD VSW TL+ GY +D +A++ + M+ ++
Sbjct: 212 TWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEV 271
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ LV + ACAR + +G+ +H I N +F+ LV FY CG I A
Sbjct: 272 GANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLA 331
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGR------------------------------- 326
F S + + +WNA+L L +GL R
Sbjct: 332 QMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSD 391
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE-MESVYGVSKELKHYGC 385
++L F M+ I+P+ VT+ AL + +G +D+ + + D M ++ L
Sbjct: 392 MALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLS--SG 449
Query: 386 MADLLGRAGLIEEALEMIKKM-PMGGDVFVWSGLLGGCRIHG 426
+ D+ + G I +A++ ++ V W+ ++ IHG
Sbjct: 450 LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHG 491
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 14/264 (5%)
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVF-HRLRDAQELFDEI 172
PFL+ + + + +H+ K G + +VFV NS++ Y L A +LFDE
Sbjct: 10 PFLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDET 69
Query: 173 L--YRDVVSCNTLIDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAI 228
RD + N+++ +AG L A+ L + MP RDAVS+ TLV +A++ A+
Sbjct: 70 PPPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAV 129
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF--LSTGLVD 286
+F +M+ ++ P+ L A++A AR G IH + Q +D F ++T LV
Sbjct: 130 AVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFAL--QRALDGFVIVATNLVH 187
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YA + +A +F+ +N TWN ML G + ++ F R+ E D V+
Sbjct: 188 AYAGVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPE----RDEVS 243
Query: 347 ILGALVGCSHAGLVDEARKLFDEM 370
L + G A L+ +A K + +M
Sbjct: 244 WLTLIDGYICADLISDAMKAYVQM 267
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 240/436 (55%), Gaps = 1/436 (0%)
Query: 54 SSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYS 113
S + L + F+ + + S+N++I + A LF +MR D ++
Sbjct: 89 SYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFT 148
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
LL ACSQ + + +H +L G D+ + +L+ +Y L A+ F+ +
Sbjct: 149 LASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMP 208
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
+ VVS +++ K G + AR FD MP R+ VSW T+++ Y Q Q EA+ L+
Sbjct: 209 IKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQ 268
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M PD LV LSAC R+G+L GK +H YI N D L L+D YAKCG
Sbjct: 269 MQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQ 328
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
++TAI +F +N+ +WN ++ GLAMHG ++ +F M+ PDG+T + L
Sbjct: 329 VDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVR-NTSPDGITFVALLSS 387
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSH GL++ + F+ M VY V E++HY CM DLLGR G +E+A+ +IK+MPM DV
Sbjct: 388 CSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVV 447
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LLG CRIHGNV+I + + +++L+ GG++ +++++ ++WED+ ++R+ +
Sbjct: 448 VWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRLRKLMK 507
Query: 474 AGKIKKNAGCSLIQLN 489
+K+ G S I++N
Sbjct: 508 ERGTRKDMGVSSIEIN 523
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 169/392 (43%), Gaps = 66/392 (16%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ I P YNTI RA+ P A+ L M + P+ ++ PF+++AC++ +
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
A +H LKLGF+ VFV N+L+H Y L D++ FDE+ R+VVS N++I G
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y +AGD EA LF M D L
Sbjct: 121 YAQAGDT-------------------------------REACALFGEMRRQGFLGDEFTL 149
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S L AC++ G LE G+ +H + ++ VD L LVD Y+KCG + A FE
Sbjct: 150 ASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPI 209
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI-------------------------- 340
K++ +W +ML HG + +F M E
Sbjct: 210 KSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQM 269
Query: 341 -----KPDGVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAG 394
PD T++ L C G + + + + ++++ + ++ + D+ + G
Sbjct: 270 QSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIH--NPDISLINSLLDMYAKCG 327
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
++ A+ + ++M +V W+ ++GG +HG
Sbjct: 328 QVDTAIRLFREM-CNRNVVSWNVIIGGLAMHG 358
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 237/426 (55%), Gaps = 3/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF-LLRACS 122
A +F IP S+ T+I + +A+ + QM D+ L++AC+
Sbjct: 229 AAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACA 288
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + + Q +H+ +LK GF FV +L+H Y + AQ F S N
Sbjct: 289 RYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNA 348
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+ ++ G + AR+LFD MP RD VSW T+++GY Q+ + + A++LF +M++ I+P+
Sbjct: 349 LLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPN 408
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ L SALSA A G L+QGK IH YI +++ LS+GL+D YAKCG I A++ F
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFN 468
Query: 303 SSQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
+K ++ WNAM+ LA+HG +SL FS++ IKP+ +T +G L C HAG V
Sbjct: 469 RVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTV 528
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + F+ M YG+ +KHYGCM DLLGRAG +EEA +++ MPM DV +W +L
Sbjct: 529 TKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILS 588
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
R GNV + E AAE + KL G L+++YA+A W +V +R+ L +++
Sbjct: 589 ASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWINVSVVRKELQDANLERL 648
Query: 481 AGCSLI 486
G S I
Sbjct: 649 TGRSGI 654
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 38/402 (9%)
Query: 61 LSYALSIFNNIP--YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L A + +P + SY T++ + AV +F M + ++ P+ + +
Sbjct: 92 LDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSENVVPNEATLAGAI 151
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A ++ + + IH L+ V V +L+H Y L A+ LFD + YR+ V
Sbjct: 152 TAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDGMTYRNTV 211
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DL 237
+ N +++GYVKA + A ++F R+P RD VSW TL+ GY +D +A++ + M+ ++
Sbjct: 212 TWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEV 271
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ LV + ACAR + +G+ +H I N +F+ LV FY CG I A
Sbjct: 272 GANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLA 331
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGR------------------------------- 326
F S + + +WNA+L L +GL R
Sbjct: 332 QMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSD 391
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE-MESVYGVSKELKHYGC 385
++L F M+ I+P+ VT+ AL + +G +D+ + + D M ++ L
Sbjct: 392 MALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLS--SG 449
Query: 386 MADLLGRAGLIEEALEMIKKM-PMGGDVFVWSGLLGGCRIHG 426
+ D+ + G I +A++ ++ V W+ ++ IHG
Sbjct: 450 LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHG 491
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 14/264 (5%)
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVF-HRLRDAQELFDEI 172
PFL+ + + + +H+ K G + +VFV NS++ Y L A +LFDE
Sbjct: 10 PFLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDET 69
Query: 173 L--YRDVVSCNTLIDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAI 228
RD + N+++ +AG L A+ L + MP RDAVS+ TLV +A++ A+
Sbjct: 70 PPPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAV 129
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF--LSTGLVD 286
+F +M+ ++ P+ L A++A AR G IH + Q +D F ++T LV
Sbjct: 130 AVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFAL--QRALDGFVIVATNLVH 187
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YA + +A +F+ +N TWN ML G + ++ F R+ E D V+
Sbjct: 188 AYAGVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPER----DEVS 243
Query: 347 ILGALVGCSHAGLVDEARKLFDEM 370
L + G A L+ +A K + +M
Sbjct: 244 WLTLIDGYICADLISDAMKAYVQM 267
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 255/485 (52%), Gaps = 42/485 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I +C + +++ QI A+ + +S T L T SPT +SYA
Sbjct: 37 LISKCNSERELMQIQAYAIKSHQEDVS----FNTKLINFCT-------ESPTESSMSYAR 85
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ + P +N+I R ++ ++PL LF ++ + PD Y+FP LL+AC+
Sbjct: 86 HLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAK 145
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + +H +KLG +V+V C TLI+
Sbjct: 146 ALEEGRQLHCLSMKLGVDDNVYV-------------------------------CPTLIN 174
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y + D+ AR +FDR+ V + ++ GYA+ ++ EA+ LF M ++KP+ I
Sbjct: 175 MYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEIT 234
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
L+S LS+CA LG L+ GK IH Y + + ++T L+D +AKCG ++ A+ IFE+ +
Sbjct: 235 LLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMR 294
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+ W+AM+V A HG S++ F RM ++PD +T LG L CSH GLV+E R+
Sbjct: 295 YKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGRE 354
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F M +G+ +KHYG M DLLGRAG +E+A E I K+P+ +W LL C H
Sbjct: 355 YFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSH 414
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+E+AE +E +++L GG Y +L+++YA +WE V +R+ + K K GCS
Sbjct: 415 NNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSS 474
Query: 486 IQLNG 490
I++N
Sbjct: 475 IEVNN 479
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 271/545 (49%), Gaps = 67/545 (12%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISS-------------A 53
IK CK ++ QIHA +T GL++ + + ++ F
Sbjct: 12 IKDCKNLRIFRQIHAQLVTSGLVYDD--FVTSKVMEFFANFVEYGDYACDYLEQGNTRLG 69
Query: 54 SSPTTDPLS---------YALSIFNNIP----YPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
S P ++ A+S++ + P F++ +++A + FS +
Sbjct: 70 SFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHG 129
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY---- 156
+ + + D Y L+R S A + ++L + DV NSL+ +
Sbjct: 130 VVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEML----VRDVVSWNSLISGFMKAG 185
Query: 157 ------CVFHRL-------------------------RDAQELFDEILYRDVVSCNTLID 185
VF R+ + + + ++V N ++D
Sbjct: 186 HFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLD 245
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
YVK G A+ +FD +P RD VSW ++ G QSD +++++LF M L I PD I
Sbjct: 246 MYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAII 305
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
L S LSACA LG L+ G +H YI I+ D + T +VD YAKCG I A++IF S
Sbjct: 306 LTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMS 365
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++N FTWNA+L GLAMHGL +L F MI + +KP+ +T L L C H GLVDE RK
Sbjct: 366 QRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRK 425
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
FD M +Y + +L+HYGCM DL RAGL+EEA+E+ + MPM DV +W LL C
Sbjct: 426 YFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTV 485
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
GN+E++ +++++L +D GV+ +L+++ A RW +V ++RR + ++K G S+
Sbjct: 486 GNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSV 545
Query: 486 IQLNG 490
I+++G
Sbjct: 546 IEVDG 550
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 232/429 (54%), Gaps = 31/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A ++F+++ + S+ +I + A+ LF QM+ P +F +L+
Sbjct: 583 LQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKV 642
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ S L G ++LNS EL D
Sbjct: 643 CTS-----------SACLDEGKKVIAYILNS-------------GYEL-------DTGVG 671
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LI Y K+G + AR++FD+MP RD VSW ++AGYAQ+ + A++ M + D+
Sbjct: 672 NALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVV 731
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + VS L+AC+ LE+GK +H I +++ D + L+ YAKCG A E+
Sbjct: 732 PNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEV 791
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F++ EKN+ TWNAM+ A HGL +L +F+ M + IKPDG T L C+HAGLV
Sbjct: 792 FDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLV 851
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
E ++F MES YGV ++HYGC+ LLGRA +EA +I +MP D VW LLG
Sbjct: 852 LEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLG 911
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHGN+ +AE AA + +KL + VY +L++VYA A RW+DV KIRR ++ I+K
Sbjct: 912 ACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKE 971
Query: 481 AGCSLIQLN 489
G S I+++
Sbjct: 972 PGRSWIEVD 980
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 178/386 (46%), Gaps = 38/386 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F +P S+N II + A+ L+ QM++ + P +F LL A
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ +++ + IH +L+ G + + N+LM++Y
Sbjct: 441 CANSSAYADGKMIHEDILRSGIKSNGHLANALMNMY------------------------ 476
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ G L A+ +F+ RD +SW +++AG+AQ E A +LF M + +++
Sbjct: 477 -------RRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELE 529
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PDNI S LS C LE GK IH I + +++D L L++ Y +CG + A +
Sbjct: 530 PDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNV 589
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F S Q +++ +W AM+ G A G ++ F +M +P T L C+ + +
Sbjct: 590 FHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACL 649
Query: 361 DEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
DE +K+ + S Y + + + + ++G + +A E+ KMP D+ W+ ++
Sbjct: 650 DEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMP-SRDIVSWNKII 706
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPED 445
G +G + + A E +++ +D
Sbjct: 707 AGYAQNG---LGQTAVEFAYQMQEQD 729
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 160/348 (45%), Gaps = 33/348 (9%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
YN +I A + A + +MR+ + + ++ +L ACS + + IHS +
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
+ G DV + N LI Y + GDL AR+
Sbjct: 358 EDGHSSDVQI-------------------------------GNALISMYARCGDLPKARE 386
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
LF MP RD +SW ++AGYA+ + EA++L+ M +KP + + LSACA
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
GK IH I + I+ + L+ L++ Y +CG + A +FE +Q +++ +WN+M+ G
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAG 506
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
A HG + F M ++PD +T L GC + ++ +++ + + G+
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRI-TESGLQL 565
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
++ + ++ R G +++A + + DV W+ ++GGC G
Sbjct: 566 DVNLGNALINMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGCADQG 612
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 158/358 (44%), Gaps = 33/358 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P S+N++I + A LF +M+ P+ ++ +L AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ IHSQ++K G+ D V NSL+ +Y
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYG-------------------------- 174
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
K GDL ARQ+F + RD VS+ T++ YAQ +E + LF M I PD
Sbjct: 175 -----KCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK 229
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++ L A L++GK IH+ + D + T LV +CG +++A + F+
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKG 289
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+ ++++ +NA++ LA HG + + RM + + T L L CS + + EA
Sbjct: 290 TADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKAL-EA 348
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
KL S G S +++ + + R G + +A E+ MP D+ W+ ++ G
Sbjct: 349 GKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK-RDLISWNAIIAG 405
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 160/366 (43%), Gaps = 33/366 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A ++F S+N++I H S A LF +M+ + PD +F +L
Sbjct: 482 LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + L + IH ++ + G DV +
Sbjct: 542 CKNPEALELGKQIHGRITESGLQLDVNL-------------------------------G 570
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LI+ Y++ G L AR +F + RD +SW ++ G A + +AI+LF M + +
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFR 630
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P S L C L++GK + YI + +D+ + L+ Y+K G + A E+
Sbjct: 631 PVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREV 690
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ +++ +WN ++ G A +GLG+ ++ + +M E + P+ + + L CS +
Sbjct: 691 FDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSAL 750
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E +++ E+ + +++ + + + G EA E+ + + +V W+ ++
Sbjct: 751 EEGKRVHAEIVK-RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMIN 808
Query: 421 GCRIHG 426
HG
Sbjct: 809 AYAQHG 814
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
D+ N LI+ YVK + A Q+F MP RD +SW +L++ YAQ ++A QLF M
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ P+ I +S L+AC ELE GK IH I + D + L+ Y KCG +
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A ++F +++ ++N ML A + L F +M I PD VT + L +
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
++DE +++ ++ G++ +++ + + R G ++ A + K DV V+
Sbjct: 241 TPSMLDEGKRIH-KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVY 298
Query: 416 SGLLGGCRIHG-NVEIAE 432
+ L+ HG NVE E
Sbjct: 299 NALIAALAQHGHNVEAFE 316
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 158/375 (42%), Gaps = 41/375 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F I SYNT++ + + + LF QM + I PD ++ LL
Sbjct: 179 LPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL-- 236
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
D F S++ H+L +E L D+
Sbjct: 237 ------------------------DAFTTPSMLDEGKRIHKL-----TVEEGLNSDIRVG 267
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+ V+ GD+ A+Q F RD V + L+A AQ EA + + M +
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ +S L+AC+ LE GK IH +I + D + L+ YA+CG + A E+
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + +++L +WNA++ G A ++ + +M +KP VT L L C+++
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLL----GRAGLIEEALEMIKKMPMGGDVFVWS 416
+ + + +++ + +K G +A+ L R G + EA + + DV W+
Sbjct: 448 ADGKMIHEDI-----LRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT-QARDVISWN 501
Query: 417 GLLGGCRIHGNVEIA 431
++ G HG+ E A
Sbjct: 502 SMIAGHAQHGSYETA 516
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
V+ L C R L + K IH + + D FLS L++ Y KC + A ++F+
Sbjct: 31 VALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPR 90
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+++ +WN+++ A G + + F M A P+ +T + L C ++ +K+
Sbjct: 91 RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKI 150
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++ G ++ + + + G+ G + A ++ + DV ++ +LG
Sbjct: 151 HSQIIKA-GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS-PRDVVSYNTMLG 202
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 228/389 (58%)
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR 161
M+ + PD +L C+ + + IHS +L + D V +LM++Y
Sbjct: 1 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCAD 60
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
+ A++L++ + +++V T++ GY K G + A +F+ MP +D VSW ++AGYA+S
Sbjct: 61 MEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAES 120
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
+ EA+ LF +M +KPD I ++S +SACA +G LE+ + IH ++E + + +
Sbjct: 121 SKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIG 180
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK 341
L+D ++KCG + A+++F + +KN+ TW +++ AMHG GR +L F M I+
Sbjct: 181 NALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQ 240
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
P+GVT LG L C HAGLV+E R LF M Y + +HYGCM DLLGRA L+ +A +
Sbjct: 241 PNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAAD 300
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADR 461
+I+ M + +V +W LL CR+HG++E+ AA+ +++L P GG +L+++YA
Sbjct: 301 LIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGN 360
Query: 462 WEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
W DV ++R ++ K GCS ++LNG
Sbjct: 361 WNDVKEVRGVMEVQGTWKKKGCSWMELNG 389
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 136/325 (41%), Gaps = 40/325 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A SIFN +P S++ +I + S P+ A+ LF M+ + PD + ++ AC+
Sbjct: 95 AHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACAN 154
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + A+ IHS FV N H C + + N L
Sbjct: 155 VGALEKARCIHS-----------FVEN---HSMC-----------------KILPIGNAL 183
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID + K G L A +F+ MP ++ V+W +++ A A+ LF NM I+P+
Sbjct: 184 IDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNG 243
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAIEIF 301
+ + L AC G +E+G+ + + I + Q R++ +VD + + A ++
Sbjct: 244 VTFLGLLYACCHAGLVEEGRLLFK-IMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLI 302
Query: 302 ESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
+S + N+ W ++L MHG L +++E G +L + + +
Sbjct: 303 QSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWN 362
Query: 361 DEARKLFDEMESVYGVSKELKHYGC 385
D E+ V V K GC
Sbjct: 363 D-----VKEVRGVMEVQGTWKKKGC 382
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 227/420 (54%), Gaps = 32/420 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA+S+F I P F +NT+IR + P A + +M+ + D ++F FLL+
Sbjct: 38 MNYAVSVFEKIGDPDAFIFNTMIRGFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKV 97
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C QL L + +H LK G VFV N+L+H+Y F
Sbjct: 98 CGQLGLVLLGRLMHCSTLKRGLNSHVFVRNTLVHMYGTFK-------------------- 137
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
D+ +RQLF+ +P + V+W ++ + + EA+++F M+ I+
Sbjct: 138 -----------DIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLKFGIE 186
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD V LSAC+ LG L+ G+ +H I + ++ L+D YAKCG + A EI
Sbjct: 187 PDEATFVVILSACSALGALDFGRWVHSCISNIGHGCITEVNNSLLDMYAKCGALQEAFEI 246
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI-KPDGVTILGALVGCSHAGL 359
F +KN TWN M++GLA HG +L FS M+E ++ PD +T L L CSH G+
Sbjct: 247 FNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGM 306
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ + FD M+ Y + +KHYGCM D+LGRAG +EEA +I MPM + VW LL
Sbjct: 307 VDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVWRTLL 366
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+HGNVE+ + + +++L+P+ Y +LA+ YA+A RW + +++R+++ ++K
Sbjct: 367 AACRLHGNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVRKTMHKRGVQK 426
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 44/182 (24%)
Query: 263 KNIH-RYIELNQIRVDSFLSTGLVDF--YAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
K IH R I+L + F+ ++ F A+ G +N A+ +FE + + F +N M+ G
Sbjct: 5 KQIHARVIQLG-FEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMIRGF 63
Query: 320 AMHGLGRLSLVYFSRMIEARIKPD--------------GVTILGALVGCS--HAGL---- 359
R + Y+ RM E + D G+ +LG L+ CS GL
Sbjct: 64 GKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLNSHV 123
Query: 360 ---------------VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
++ +R+LF+E+ + EL + + D G EALEM
Sbjct: 124 FVRNTLVHMYGTFKDIEASRQLFEEIP-----NPELVAWNIIIDCHVSCGKFNEALEMFS 178
Query: 405 KM 406
+M
Sbjct: 179 RM 180
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 255/445 (57%), Gaps = 4/445 (0%)
Query: 49 PISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
P S+ S P + LS+ + T S+ + I H ++ L A F QM +
Sbjct: 25 PPSTFSPPNNPNKNQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVE 84
Query: 109 PDFYSFPFLLRACSQLCSHS---LAQTIHSQVLKLGF-ICDVFVLNSLMHVYCVFHRLRD 164
P+ + LL AC+ S + +H+ K GF + DV V +L+ +Y +L
Sbjct: 85 PNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDY 144
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A+ +FD++ R++VS NT+IDGY+K GD+ A +LFD++P ++ VSW ++ G+ + +
Sbjct: 145 ARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECY 204
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
EEA++ F M + PD + +++ +SACA LG L G +HR + + R + + L
Sbjct: 205 EEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSL 264
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
+D YA+CG I A ++F+ ++NL +WN+++VG A++GL +L +F M + ++P+G
Sbjct: 265 IDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNG 324
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
V+ AL CSHAGL+DE K+F +++ + S ++HYGC+ DL RAG ++EA ++IK
Sbjct: 325 VSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIK 384
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
KMPM + V LL CR G+VE+AE ++ ++L P Y + +++YA +W+
Sbjct: 385 KMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDG 444
Query: 465 VVKIRRSLDAGKIKKNAGCSLIQLN 489
K+RR + ++KN S I+++
Sbjct: 445 ASKVRREMKERGLQKNLAFSSIEID 469
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 271/490 (55%), Gaps = 17/490 (3%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
T + +K + ++ QIH H + G L L ++ ++ + + + S L
Sbjct: 134 TFLHLMKASSFLSEVKQIHCHIIVSGCLSLGN-YLWNSL---VKFYMELGS--------L 181
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+A +F +P P S+N +I + L A+ L+ +M + I PD Y+ LL C
Sbjct: 182 GFAEKVFAIMPQPDVSSFNVMIVGYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCC 241
Query: 122 SQLCSHSLAQTIHSQVLKLG--FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
L L + +H + + G + ++ + N+L+ +Y A+ FD + +D+ S
Sbjct: 242 GHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMRS 301
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI-QLFCNMMDLD 238
NT++ G+V+ GD+ A+ +FD+MP RD VSW +L+ Y++ + A+ +LF M+ ++
Sbjct: 302 WNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVE 361
Query: 239 -IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+KPD + +VS +S A GEL G+ +H + Q+ D+FLS+ L+D Y KCG I A
Sbjct: 362 KVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQLEGDAFLSSALIDMYCKCGLIERA 421
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+++ EK++ W +M+ G A HG G+ +L F RM E + P+ VT+L L CSH+
Sbjct: 422 FMVFKTATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSHS 481
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK-KMPMGGDVFVWS 416
GLV+E +F M+ +G E +HYG + DLL RAG +EEA ++++ KMPM +W
Sbjct: 482 GLVEEGLHVFYHMKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWG 541
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
+L CR ++E AE A ++KL+PE G Y +L+++YA RW K R ++++
Sbjct: 542 SILSACREGEDIETAELALSELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRG 601
Query: 477 IKKNAGCSLI 486
+KK AG S +
Sbjct: 602 VKKTAGYSSV 611
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 197/482 (40%), Gaps = 99/482 (20%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C + Q Q+ A + L+ + + ++ S+ + P L+ L
Sbjct: 39 LLENCSSRNQFKQVLAQIMRFNLI---------GVTFPMSRLIFFSAITYPENLDLA-KL 88
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+ P P+ F YNT+I A + SS L+S M + PD +F L++A S L
Sbjct: 89 LFLDFTPNPNVFVYNTMISAVS--SSKNECFGLYSSMIRYRVSPDRQTFLHLMKASSFL- 145
Query: 126 SHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S + IH ++ G + ++ NSL+ Y L A+++F + DV S N +I
Sbjct: 146 --SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMI 203
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY K G +G EA++L+ M+ I+PD
Sbjct: 204 VGYAKQG-------------------FGL------------EALELYYKMVSDGIEPDEY 232
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIEIFE 302
L+ L C L ++ GK +H +IE S L L+D Y KC A F+
Sbjct: 233 TLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRAFD 292
Query: 303 SSQEKNLFTWNAMLVGLAMHG-----------LGRLSLV--------------------- 330
+ ++K++ +WN M+VG G + + LV
Sbjct: 293 ALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRE 352
Query: 331 -YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG----- 384
++ +I ++KPD VT++ + G ++ G + R V+G+ L+ G
Sbjct: 353 LFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGR-------WVHGLMIRLQLEGDAFLS 405
Query: 385 -CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKP 443
+ D+ + GLIE A M+ K DV +W+ ++ G HG + A + +++
Sbjct: 406 SALIDMYCKCGLIERAF-MVFKTATEKDVPLWTSMITGFAFHG---YGQQALQLFKRMQE 461
Query: 444 ED 445
ED
Sbjct: 462 ED 463
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 240/420 (57%), Gaps = 3/420 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLR 119
L A +F+ +P S+ T++ + A LF +M V + P+ + +
Sbjct: 194 LDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVS 253
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
A Q+ + +H V + G V + N+L+ ++ +R A+E+FD + +DV S
Sbjct: 254 AIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYS 313
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
++++ Y K GDL A QLF MP R+ VSW ++A Y+Q +Q EEA+ LF M+ +
Sbjct: 314 WTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGV 373
Query: 240 KPDNIALVSALSACARLGELEQGKNIHR-YIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
P + LVS LSACA+LG L+ G+ I+ YI N+I + L L+D +AKCG + A
Sbjct: 374 DPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEAS 433
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F+ E+N+ +WN M++ A+HG ++ F ++ I PD +T LG L CSH+G
Sbjct: 434 KLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSG 493
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV E R+ F EME Y + ++HY CM DLLG+ GL+EEA E+ + MPM D W L
Sbjct: 494 LVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGAL 553
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL-DAGKI 477
L CR+HGNVEI A+ +++L P D G+Y +++ +YA+ ++W+ V +R ++ D G +
Sbjct: 554 LNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGTV 613
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 200/468 (42%), Gaps = 81/468 (17%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + ++ C + +++ Q+HA GL + F + S+P +
Sbjct: 38 LLSLLESCASFRRLLQLHALLTVTGL---------AGNGFPAFGFLAFCALSTPPRLAHA 88
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
A+ + P P+ + T++R P A+ LF ++ +P D +F F ++A +
Sbjct: 89 AAILARAS-PGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAA 147
Query: 123 QLC------SHSLAQTIHSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
+ S + IH LK GF+ + V V N+L+H Y L DA ++FDE+ R
Sbjct: 148 AAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPER 207
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
DVVS TL+DGY +AG +EA +LFC M+
Sbjct: 208 DVVSWTTLVDGYARAG-------------------------------LADEAWRLFCRMV 236
Query: 236 DL-DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ ++P+ + LV+A+SA ++G L G +H+Y+ + L LVD + KCG +
Sbjct: 237 VVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCV 296
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHG-----------LGRLSLV------------- 330
A E+F+ + K++++W +M+ A G + R ++V
Sbjct: 297 RYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLN 356
Query: 331 -------YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
F MI A + P T++ L C+ G +D R +++ + +
Sbjct: 357 QPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLG 416
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ D+ + G + EA ++ +M +V W+ ++ +HG E A
Sbjct: 417 NALIDMFAKCGDVGEASKLFDEMAE-RNVVSWNTMIMAHAVHGQSEEA 463
>gi|22331393|ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g28660
gi|9294280|dbj|BAB02182.1| unnamed protein product [Arabidopsis thaliana]
gi|20259531|gb|AAM13885.1| unknown protein [Arabidopsis thaliana]
gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis thaliana]
gi|332643950|gb|AEE77471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 264/493 (53%), Gaps = 50/493 (10%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+RC T+KQI H+ F+ GL H T YAI+ YA SI
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGL------HRNT---YAISKLLTAFLHLPNLNKHFHYASSI 69
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSP---LNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
F++I P++F Y+T+IR + S P L +L + I P + +F FL+ AC +
Sbjct: 70 FDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKA 129
Query: 125 CSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
C S+ + IH V+K G F+ D V ++ +Y + + LFD
Sbjct: 130 CFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYV------EDKLLFD------------- 170
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
AR++FD +P D V W L+ GY + E +++F M+ I+PD
Sbjct: 171 ------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDE 218
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++ +AL+ACA++G L QGK IH +++ + I D F+ T LVD YAKCG I TA+E+FE
Sbjct: 219 FSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE 278
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVD 361
+N+F+W A++ G A +G + + R+ E IKPD V +LG L C+H G ++
Sbjct: 279 KLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E R + + ME+ YG++ + +HY C+ DL+ RAG +++AL++I+KMPM VW LL G
Sbjct: 339 EGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Query: 422 CRIHGNVEIAEAAAEHVMKLKP----EDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
CR H NVE+ E A ++++ L+ E+ L+++Y + R + K+R ++ I
Sbjct: 399 CRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGI 458
Query: 478 KKNAGCSLIQLNG 490
+K G SL++++G
Sbjct: 459 RKTPGWSLLEVDG 471
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 256/487 (52%), Gaps = 47/487 (9%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++RCK K I IHA + G L A K S D A
Sbjct: 13 LLQRCKGTKTIKSIHAQIIIGGFE-------ENPFLGAKLVGKYAQCYESNIED----AR 61
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ +P F +NTII+ + + A+ ++ MR + + Y+FPF+L+AC +
Sbjct: 62 KVFDCLPDRDVFVWNTIIQGYANLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMK 121
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
Q IH V+K G D+FV N+L+ Y CN
Sbjct: 122 DGKKGQAIHGHVVKHGLDLDLFVGNALVAFY---------------------AKCN---- 156
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM----DLDIKP 241
++ +R++FD + +D V+W ++++GYA + ++A+ LF NM+ D P
Sbjct: 157 ------EIGASRRVFDMISEKDIVTWNSMISGYAINGCADDALVLFHNMLQVQGDTVYAP 210
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D+ LV+ L ACA+ +++G IH Y+ + I +D+ L +GL+ YA CG +N+A ++F
Sbjct: 211 DSATLVAILPACAQAAAIQEGLWIHSYVIKSGIELDAALGSGLIAMYANCGLLNSARDVF 270
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ +KN+ WNA++ MHG +L FS +I++ + PDGV L L SHAG+V
Sbjct: 271 DRIDDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHPDGVIFLCLLSAFSHAGMVA 330
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E +LF++M YGV K +HY + D+LGRAG + EA+E +K MP+ V+ LLG
Sbjct: 331 EGMELFEKMGD-YGVEKSSEHYASVVDILGRAGFLHEAVEFVKNMPVQPGKDVYGALLGA 389
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRIH N+E+AE AE + L P++ G Y +L +Y +A +WE+ ++R++L I+K
Sbjct: 390 CRIHNNIELAEEIAEKLFVLDPDNAGRYIILVKMYEDAGKWENAARLRKALKEKNIRKPL 449
Query: 482 GCSLIQL 488
GCS I+L
Sbjct: 450 GCSAIEL 456
>gi|41469497|gb|AAS07282.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 476
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 231/432 (53%), Gaps = 3/432 (0%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+YA + + P P+ F +NT IRA P AV LF M PP+ +FP L A
Sbjct: 38 AYAARLVRHHPRPNAFMWNTAIRALADGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAY 97
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
++L +H V+KLG D +V NS++ +Y +A L D V+CN
Sbjct: 98 ARLGRAGDGAGLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACN 157
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+ I +AG + AR +FD MP R +W +V+ Y++ +C +A++LF M ++P
Sbjct: 158 SAIVALARAGRVDEARAVFDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEP 217
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ LVS L CA LG LEQG +H YI+ + + +++ + T LVD Y KCG I A E+F
Sbjct: 218 NANVLVSVLGCCASLGALEQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVF 277
Query: 302 ESSQEKN---LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++S+ + L +WN+M++G A+HG R + FS + ++PD VT + L+ H+G
Sbjct: 278 DASRSRGQAKLSSWNSMMLGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSG 337
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+ DEA+ + M S +GV ++HYGC+ D L RAG + EA I MP+ D VW L
Sbjct: 338 MADEAKAVLASMASEHGVVPGVEHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGAL 397
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L GCR+HG+ E A AA ++ P D G Y + A A +R + +
Sbjct: 398 LSGCRLHGDAEAAARAAREAVRCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVG 457
Query: 479 KNAGCSLIQLNG 490
K GCS+I+++G
Sbjct: 458 KVPGCSMIEVDG 469
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 117/321 (36%), Gaps = 52/321 (16%)
Query: 168 LFDEILYRDVVSCNTLIDGYVKAG-DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
L L RD ++ + + G D A+A +L P +A W T + A
Sbjct: 11 LVKSGLARDPIAASRAVAFCAGDGRDAAYAARLVRHHPRPNAFMWNTAIRALADGPGPGA 70
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
A+ LF +M+ P+ S +A ARLG G +H + + D+++ ++
Sbjct: 71 AVALFVDMLGSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLGGDAYVRNSVIA 130
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YA G + AI + + + N+ +V LA
Sbjct: 131 MYASRGAADEAIALLARCEAFDAVACNSAIVALA-------------------------- 164
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
AG VDEAR +FD M ++ + + M R +A+E+ M
Sbjct: 165 ---------RAGRVDEARAVFDGMP-----ARTVATWSAMVSAYSRDSRCHDAVELFSAM 210
Query: 407 PMGG---DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE---DGGVYKVLADVYANAD 460
G + V +LG C G +E + A H K + + V L D+Y
Sbjct: 211 QAEGVEPNANVLVSVLGCCASLGALE--QGAWVHAYIDKHDVAMNALVVTALVDMYCKCG 268
Query: 461 RWEDVVKIRRSLDAGKIKKNA 481
D+ K R DA + + A
Sbjct: 269 ---DIRKAREVFDASRSRGQA 286
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 236/428 (55%), Gaps = 9/428 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A S+F+ +P S+N +I + A LF ++ D +++ ++
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPI----RDVFAWTAMVSG 286
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
Q A I ++ + + N+++ Y ++ A+ELFD++ R+ S
Sbjct: 287 FVQNGMLDEATRIFEEMPEKNEVS----WNAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT++ GY + G++ A+ LFD MP RD +SW +++GYAQS Q EEA+ LF M
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ AL ALS+CA + LE GK +H + + L+ Y KCG I A ++
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE EK++ +WN M+ G A HG G+ +L F M + IKPD VT++G L CSH GLV
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLV 521
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F+ M YG++ KHY CM DLLGRAG ++EAL ++K MP D W LLG
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
RIHG+ E+ E AAE V +++P++ G+Y +L+++YA + RW +V ++R + +KK
Sbjct: 582 ASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKV 641
Query: 481 AGCSLIQL 488
G S +++
Sbjct: 642 PGYSWVEI 649
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 190/431 (44%), Gaps = 54/431 (12%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
+ + A +F +P S+N ++ + + A LF+QM D S+
Sbjct: 103 SNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNA 158
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L +Q A+ I Q+L + + N L+ Y R+ DA+ LFD + +
Sbjct: 159 MLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE 214
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
+VS N L+ GYV+ L AR LFDRMP RD +SW ++ GYAQ+ EA +LF +
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF---EE 271
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHR----------------YIELNQI------ 274
L I+ D A + +S + G L++ I Y++ QI
Sbjct: 272 LPIR-DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKAREL 330
Query: 275 ------RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
R S +T +V YA+CG I+ A +F+ +++ +W AM+ G A G +
Sbjct: 331 FDQMPSRNTSSWNT-MVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEA 389
Query: 329 LVYFSRMIEARIKPDG-----VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
L F +M K DG + AL C+ ++ ++L + G
Sbjct: 390 LHLFIKM-----KRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIAG 443
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV-MKLK 442
+ + G+ G IEEA ++ + + D+ W+ ++ G HG + A A E + M +K
Sbjct: 444 NALLAMYGKCGSIEEAFDVFEDITE-KDIVSWNTMIAGYARHGFGKEALALFESMKMTIK 502
Query: 443 PEDGGVYKVLA 453
P+D + VL+
Sbjct: 503 PDDVTLVGVLS 513
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 156/326 (47%), Gaps = 45/326 (13%)
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
N+++ Y ++ A+++F+++ RD++S N ++ GYVK G+L+ AR LF++MP +D V
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH--- 266
SW +++G+AQ+ EEA ++F M+ + I+ LSA + G +E + +
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARRLFDSK 210
Query: 267 ----------------RYIELNQIRV--------DSFLSTGLVDFYAKCGYINTAIEIFE 302
R L+ R D ++ YA+ G ++ A +FE
Sbjct: 211 MDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFE 270
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+++F W AM+ G +G+ L +R+ E + + V+ + G + +++
Sbjct: 271 ELPIRDVFAWTAMVSGFVQNGM----LDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
AR+LFD+M S+ + M + G I++A + +MP D W+ ++ G
Sbjct: 327 ARELFDQMP-----SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQ-RDCISWAAMISGY 380
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGV 448
G +E A +K+K DGG+
Sbjct: 381 AQSGQ---SEEALHLFIKMK-RDGGI 402
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 24/280 (8%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+ N + Y + A +F+ + R V+ N +I GY+ AR++F++MP
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMP 118
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RD +SW +++GY ++ A LF M + D+ ++ + LS A+ G +E+ +
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV----VSWNAMLSGFAQNGFVEEARK 174
Query: 265 IHRYIELNQIRVDSFLS-TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
I +Q+ V + +S GL+ Y + G I A +F+S + + +WN ++ G
Sbjct: 175 I-----FDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKK 229
Query: 324 LGRLSLVYFSRMIEARIKP--DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
+ F RM P D ++ + G + GL+ EAR+LF+E+ +++
Sbjct: 230 RLDDARSLFDRM------PVRDKISWNIMITGYAQNGLLSEARRLFEELP-----IRDVF 278
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ M + G+++EA + ++MP +V W+ ++ G
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEV-SWNAMIAG 317
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 244/432 (56%), Gaps = 2/432 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLR 119
L A +F+ + S+ T+I + P A +F +M S+ P+ +
Sbjct: 182 LPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAAS 241
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
A Q+ L +T+H +++ G V + N+L+ ++ + A+E+FD + +DV S
Sbjct: 242 AAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYS 301
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+++ Y K GDL +A +LF +P R+ VSW +VA Y+ ++ +EAI++F +M+ +
Sbjct: 302 WTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGV 361
Query: 240 KPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+P + LVS LSACA+L L+ G ++ YI +++ + LS +D +AKCG + A
Sbjct: 362 EPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAAS 421
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F + ++KN+ +WN M++ +HG +L F I PD T +G L CSH G
Sbjct: 422 RLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGG 481
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV E R F EM+ VYG+ +HY CM DLLG+ GL++EA E+ + MP+G D W L
Sbjct: 482 LVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGAL 541
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR+HGNVEI + AA+ + L P D G+Y +++ +YA+ +W V +R + ++K
Sbjct: 542 LNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVK 601
Query: 479 KNAGCSLIQLNG 490
KN GCS I+++G
Sbjct: 602 KNPGCSSIEVDG 613
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 145/299 (48%), Gaps = 39/299 (13%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P+ + T++R P +A+ LF ++ + D + F ++A + S S + I
Sbjct: 95 PNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAAT--SSSPTEAI 152
Query: 134 HSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
H K GFI V N+L+H+Y L DA++LFDE+ RDVVS TLIDGY + G
Sbjct: 153 HCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGG- 211
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALS 251
+P +EA ++FC M+ + + P+ + LV+A S
Sbjct: 212 ----------LP--------------------DEAWRVFCRMVVAESVWPNEVTLVAAAS 241
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
A ++G L G+ +H+ I + R+ L LVD + KCG + A E+F+ K++++
Sbjct: 242 AAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYS 301
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
W +M+ A G L +++ + + V+ + SHA + DEA ++F++M
Sbjct: 302 WTSMVSAYAKCG----DLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDM 356
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 264/496 (53%), Gaps = 26/496 (5%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ RC T + Q+HAH G TTF I A+ + L+YA
Sbjct: 16 LSRCSTRAHLEQLHAHAFVAG-----------RAAAQTTTFHLIRFAAFRLS-CLTYARH 63
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVV-----------LFSQMRTVSIP-PDFYSF 114
+F+ P+PS F Y+ I+ A+ ++ ++ LF +M P P+ + +
Sbjct: 64 LFDATPHPSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPAPNQFVY 123
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
P +LRA S + + ++IHS K GF + S++ Y + DA++LFD +
Sbjct: 124 PLVLRAASGV-GVGIVKSIHSHACKSGFCGHDIIRTSVLDGYSRHGMMADARKLFDGLTE 182
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
R+VVS L+ GY +AG + A LF+RMP RD +W ++AG +Q+ EA+ +F M
Sbjct: 183 RNVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGIFGRM 242
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ +P+ + LSAC LG L+ GK IH Y + S + GL+D Y KCG +
Sbjct: 243 VGAGFRPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCVGFGSSVLNGLIDMYGKCGNL 302
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A IF+ +++L TWN+++ LA+HG + ++ F+ M ++PD VT +G L C
Sbjct: 303 EGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGLLNAC 362
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+H G VDE + F+ M+ +G+ E++HYGC+ DLLGRAG ++AL +I M + D +
Sbjct: 363 THGGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIEADEVM 422
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LL CR+H VE AE A +++L P + +LA+VY+ WE+V K+R+ +
Sbjct: 423 WGSLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEVRKVRKFVKE 482
Query: 475 GKI-KKNAGCSLIQLN 489
I KK GCS I+++
Sbjct: 483 ENIGKKLPGCSWIEVD 498
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 244/432 (56%), Gaps = 2/432 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLR 119
L A +F+ + S+ T+I + P A +F +M S+ P+ +
Sbjct: 182 LPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAAS 241
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
A Q+ L +T+H +++ G V + N+L+ ++ + A+E+FD + +DV S
Sbjct: 242 AAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYS 301
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+++ Y K GDL +A +LF +P R+ VSW +VA Y+ ++ +EAI++F +M+ +
Sbjct: 302 WTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGV 361
Query: 240 KPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+P + LVS LSACA+L L+ G ++ YI +++ + LS +D +AKCG + A
Sbjct: 362 EPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAAS 421
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F + ++KN+ +WN M++ +HG +L F I PD T +G L CSH G
Sbjct: 422 RLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGG 481
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV E R F EM+ VYG+ +HY CM DLLG+ GL++EA E+ + MP+G D W L
Sbjct: 482 LVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGAL 541
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR+HGNVEI + AA+ + L P D G+Y +++ +YA+ +W V +R + ++K
Sbjct: 542 LNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVK 601
Query: 479 KNAGCSLIQLNG 490
KN GCS I+++G
Sbjct: 602 KNPGCSSIEVDG 613
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 145/299 (48%), Gaps = 39/299 (13%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P+ + T++R P +A+ LF ++ + D + F ++A + S S + I
Sbjct: 95 PNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAAT--SSSPTEAI 152
Query: 134 HSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
H K GFI V N+L+H+Y L DA++LFDE+ RDVVS TLIDGY + G
Sbjct: 153 HCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGG- 211
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALS 251
+P +EA ++FC M+ + + P+ + LV+A S
Sbjct: 212 ----------LP--------------------DEAWRVFCRMVVAESVWPNEVTLVAAAS 241
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
A ++G L G+ +H+ I + R+ L LVD + KCG + A E+F+ K++++
Sbjct: 242 AAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYS 301
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
W +M+ A G L +++ + + V+ + SHA + DEA ++F++M
Sbjct: 302 WTSMVSAYAKCG----DLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDM 356
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 245/430 (56%), Gaps = 1/430 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+YA IFN + + +S+N++I + A+ LF QM+ I PD +S +L +
Sbjct: 530 LNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSS 589
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L + +H+ +++ + + L+ +Y + A +++D+ + +DV+
Sbjct: 590 CVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILN 649
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ +V +G A+ LFD+M R+ W +++AGYA +E+ F M++ DI+
Sbjct: 650 NVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIE 709
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
D + +V+ ++ C+ L LE G +H I + + L T LVD Y+KCG I A
Sbjct: 710 YDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKART 769
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F++ KN+ +WNAM+ G + HG + +L+ + M + + P+ VT L L CSH GL
Sbjct: 770 VFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGL 829
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E ++F M+ Y + + +HY CM DLLGRAG +E+A E ++KMP+ +V W LL
Sbjct: 830 VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CR+H ++++ AA+ + +L P++ G Y +++++YA A RW++V IR+ + +KK
Sbjct: 890 GACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKK 949
Query: 480 NAGCSLIQLN 489
+ G S I++N
Sbjct: 950 DPGVSWIEIN 959
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 198/430 (46%), Gaps = 50/430 (11%)
Query: 19 IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFS 78
IH ++ G + +++T IL + A S D L YA +F +P + +
Sbjct: 93 IHTQMISNG--YNPDAYLMTKIL--------MLYARSGCLDDLCYARKLFEEMPERNLTA 142
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+NT+I A+ + + L+ +MR D ++FP +++AC + + + S V+
Sbjct: 143 WNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVV 202
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
K G C++FV +L+ Y F + DA DEI VV+ N +I GYVK
Sbjct: 203 KAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK--------- 253
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+SW EEA +F M+ + + PDN SAL C L
Sbjct: 254 ---------ILSW-------------EEAWGIFDRMLKIGVCPDNFTFASALRVCGALRS 291
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
+ GK +H + + D+F+ L+D YAKC + +++F+ E+N TWN+++
Sbjct: 292 RDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISA 351
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD--EARKLFDEMESVYGV 376
A G +LV F RM E+ K + LG+++ S AGL D + R+L + +
Sbjct: 352 EAQFGHFNDALVLFLRMQESGYKSNRFN-LGSILMAS-AGLADIGKGRELHGHLVRNL-L 408
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
+ ++ + D+ + G++EEA ++ + + +V ++ LL G G AE A E
Sbjct: 409 NSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEV-SYNALLAGYVQEGK---AEEALE 464
Query: 437 HVMKLKPEDG 446
++ EDG
Sbjct: 465 LYHDMQSEDG 474
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 177/395 (44%), Gaps = 64/395 (16%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACS 122
A +F ++ + SYN ++ + A+ L+ M++ I PD ++F LL C+
Sbjct: 431 AHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCA 490
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + + IH+ +++ ++ V L+H+Y
Sbjct: 491 NQRNDNQGRQIHAHLIRANITKNIIVETELVHMYS------------------------- 525
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+ G L +A+++F+RM R+A SW +++ GY Q+ + +EA++LF M IKPD
Sbjct: 526 ------ECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPD 579
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI-------- 294
+L S LS+C L + ++G+ +H +I N + + L LVD YAKCG +
Sbjct: 580 CFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYD 639
Query: 295 -----------------------NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
N A +F+ +++N WN++L G A GL + S +
Sbjct: 640 QTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNH 699
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M+E+ I+ D +T++ + CS ++ +L + V+ + + D+
Sbjct: 700 FLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYS 759
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ G I +A + M G ++ W+ ++ G HG
Sbjct: 760 KCGAITKARTVFDNMN-GKNIVSWNAMISGYSKHG 793
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 32/311 (10%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
D L +F+ + + ++N+II A F +A+VLF +M+ + ++ +L
Sbjct: 325 DDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSIL 384
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A + L + +H +++ +L D++
Sbjct: 385 MASAGLADIGKGRELHGHLVR-------------------------------NLLNSDII 413
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+ L+D Y K G + A Q+F + R+ VS+ L+AGY Q + EEA++L+ +M D
Sbjct: 414 LGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSED 473
Query: 239 -IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
I+PD + L+ CA QG+ IH ++ I + + T LV Y++CG +N A
Sbjct: 474 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYA 533
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
EIF E+N ++WN+M+ G +G + +L F +M IKPD ++ L C
Sbjct: 534 KEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL 593
Query: 358 GLVDEARKLFD 368
+ R+L +
Sbjct: 594 SDSQKGRELHN 604
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT- 296
D+ P + S + C ++GK+IH + N D++L T ++ YA+ G ++
Sbjct: 68 DVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125
Query: 297 --AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A ++FE E+NL WN M++ A L + RM + D T + C
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ R+L + G++ L G + D R G +++A+ + ++ G V
Sbjct: 186 IAMEDMGGVRQLQSSVVKA-GLNCNLFVGGALVDGYARFGWMDDAVTSLDEIE-GTSVVT 243
Query: 415 WSGLLGG 421
W+ ++ G
Sbjct: 244 WNAVIAG 250
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 246/431 (57%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + P + S+ ++I ++ P +AV F+ M + + PD + L A
Sbjct: 187 LDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSA 246
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVS 179
CS+L + L + +H V + ++ +L+ +Y + AQ +FD + +
Sbjct: 247 CSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEP 306
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N +IDGY K G + AR LFD+M RD +++ +++ GY S + +A+QLF M +
Sbjct: 307 WNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGM 366
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ DN +VS L+ACA LG L G+ +H IE + D +L T L+D Y KCG ++ A
Sbjct: 367 RADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATA 426
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F E+++ TW AM+ GLA +G+G+ +L F +M +P VT + L CSH+ L
Sbjct: 427 VFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSL 486
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+DE R F+EM S++ + +++HYGCM DLL R+GL++EA+ +++ MPM + +W +L
Sbjct: 487 LDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSIL 546
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H N+++A AAEH++KL PE+ VY L ++Y ++ +W D ++R ++ +KK
Sbjct: 547 SACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKK 606
Query: 480 NAGCSLIQLNG 490
AG S I + G
Sbjct: 607 TAGYSSITVAG 617
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 218/454 (48%), Gaps = 51/454 (11%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPC--HILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
++++Q Q+HA T G + P H+L+++ I S+P L Y LS+F
Sbjct: 10 RSVRQASQLHALLTTSGRIAHRPSAEHLLSSLTNTI---------SAPRH--LRYVLSLF 58
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLN-AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
+ +P+ +TF ++T +RA S+ + V+L +MR+ + ++F F+ R C+
Sbjct: 59 DRLPHSTTFLFDTALRACLQASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARA 118
Query: 128 S--LAQTIHSQVLKLGFICDV-FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
L +H+ L+ V N L+H+Y DA+ FDEI +D V T+I
Sbjct: 119 RAGLCLMLHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVI 178
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
G V+ G L AR+L + P R+ VSW +L+AGY+++ + +A+ F M+ + PD +
Sbjct: 179 GGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEV 238
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC------------- 291
A++ ALSAC++L L+ G+ +H + +IR+ L L+D YAKC
Sbjct: 239 AVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAV 298
Query: 292 -------------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
G+++ A +F+ +++ T+N+M+ G G R +L F
Sbjct: 299 GRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLF 358
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
+M ++ D T++ L C+ G + R L +E V +++ + D+ +
Sbjct: 359 MQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRI-VEEDVYLGTALLDMYMK 417
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
G ++EA + +M DV W+ ++ G +G
Sbjct: 418 CGRVDEATAVFHRMG-ERDVHTWTAMIAGLAFNG 450
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 234/428 (54%), Gaps = 8/428 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P S+NT+I + A LF++ S D +++ ++
Sbjct: 217 LGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE----SPIRDVFTWTAMVSG 272
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
Q A+ ++ + + N+++ Y + ++ A ELF+ + R++ S
Sbjct: 273 YVQNGMVDEARKYFDEMP----VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSW 328
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT+I GY + G +A AR+LFD MP RD VSW +++GYAQ+ EEA+ +F M
Sbjct: 329 NTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGES 388
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ ALS CA + LE GK +H + F+ L+ Y KCG + A ++
Sbjct: 389 SNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDV 448
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +EK++ +WN M+ G A HG GR +LV F M +A +KPD +T++G L CSH+GL+
Sbjct: 449 FEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLI 508
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D + F M+ Y V KHY CM DLLGRAG +EEA +++ MP W LLG
Sbjct: 509 DRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLG 568
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
RIHGN E+ E AAE V K++P++ G+Y +L+++YA + RW DV K+R + ++K
Sbjct: 569 ASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKV 628
Query: 481 AGCSLIQL 488
G S +++
Sbjct: 629 TGYSWVEV 636
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 161/348 (46%), Gaps = 25/348 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL +FN++P S+ SYN +I + + A LF +M D +S+ +L +
Sbjct: 65 ALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM----PERDLFSWNVMLTGYVR 120
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A + + K DV N+++ Y + +A+E+F+++ +R+ +S N L
Sbjct: 121 NRRLGEAHKLFDLMPKK----DVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGL 176
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ YV G L AR+LF+ + +SW L+ GY + + +A QLF M D+
Sbjct: 177 LAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDV---- 232
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I+ + +S A++G+L Q K R + IR D F T +V Y + G ++ A + F+
Sbjct: 233 ISWNTMISGYAQVGDLSQAK---RLFNESPIR-DVFTWTAMVSGYVQNGMVDEARKYFDE 288
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
KN ++NAML G + +V + EA + + + G G + +A
Sbjct: 289 MPVKNEISYNAMLAGYVQYK----KMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQA 344
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
RKLFD M VS + + + G EEAL M +M G+
Sbjct: 345 RKLFDMMPQRDCVS-----WAAIISGYAQNGHYEEALNMFVEMKRDGE 387
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 23/320 (7%)
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
N+++ Y + A++LFD++ RD+ S N ++ GYV+ L A +LFD MP +D V
Sbjct: 81 NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVV 140
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW +++GYAQ+ +EA ++F M ++I+ L+A G L++ + +
Sbjct: 141 SWNAMLSGYAQNGFVDEAREVFNKM----PHRNSISWNGLLAAYVHNGRLKEARRLFE-- 194
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
+Q + L+ Y K + A ++F+ +++ +WN M+ G A G L
Sbjct: 195 --SQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVG----DL 248
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
R+ D T + G G+VDEARK FDEM V E+ + +A
Sbjct: 249 SQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP----VKNEISYNAMLAGY 304
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV- 448
+ ++ A E+ + MP ++ W+ ++ G +G + A A + + P+ V
Sbjct: 305 VQYKKMV-IAGELFEAMPC-RNISSWNTMITGYGQNGGI----AQARKLFDMMPQRDCVS 358
Query: 449 YKVLADVYANADRWEDVVKI 468
+ + YA +E+ + +
Sbjct: 359 WAAIISGYAQNGHYEEALNM 378
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 184/426 (43%), Gaps = 51/426 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTII----------RAHTLFS-SPLNAVVLFSQMRTVSIPP 109
S A +F+ +P FS+N ++ AH LF P VV ++ M +
Sbjct: 93 FSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQN 152
Query: 110 DFYS-----FPFLLRACSQLCSHSLAQTIHSQVLKLGFI-------CDVFVLNSLMHVYC 157
F F + S + LA +H+ LK ++ N LM Y
Sbjct: 153 GFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYV 212
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
+ L DA++LFD + RDV+S NT+I GY + GDL+ A++LF+ P RD +W +V+G
Sbjct: 213 KRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSG 272
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI---HRYIELNQI 274
Y Q+ +EA + F D + + + +S A L Q K + E
Sbjct: 273 YVQNGMVDEARKYF----------DEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPC 322
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
R S +T ++ Y + G I A ++F+ +++ +W A++ G A +G +L F
Sbjct: 323 RNISSWNT-MITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVE 381
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD--LLG- 391
M + T AL C+ ++ +++ + V K GC LLG
Sbjct: 382 MKRDGESSNRSTFSCALSTCADIAALELGKQVHGQ------VVKAGFETGCFVGNALLGM 435
Query: 392 --RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPEDGG 447
+ G +EA ++ + + DV W+ ++ G HG A E + K +KP++
Sbjct: 436 YFKCGSTDEANDVFEGIEE-KDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEIT 494
Query: 448 VYKVLA 453
+ VL+
Sbjct: 495 MVGVLS 500
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 18/257 (7%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
D+V+ N I +++ G A ++F+ MP R +VS+ +++GY ++ + A LF M
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ D+ N+ L + RLGE H+ +L + D ++ YA+ G+++
Sbjct: 105 ERDLFSWNVMLTGYVRN-RRLGE------AHKLFDL-MPKKDVVSWNAMLSGYAQNGFVD 156
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A E+F +N +WN +L +G L R+ E++ + ++ + G
Sbjct: 157 EAREVFNKMPHRNSISWNGLLAAYVHNG----RLKEARRLFESQSNWELISWNCLMGGYV 212
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
++ +AR+LFD M +++ + M + G + +A + + P+ DVF W
Sbjct: 213 KRNMLGDARQLFDRMP-----VRDVISWNTMISGYAQVGDLSQAKRLFNESPI-RDVFTW 266
Query: 416 SGLLGGCRIHGNVEIAE 432
+ ++ G +G V+ A
Sbjct: 267 TAMVSGYVQNGMVDEAR 283
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 231/371 (62%), Gaps = 11/371 (2%)
Query: 124 LCSHSLAQTIHSQVLKLGFIC--DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
LCSHSL ++KLG D F+ ++L+ Y L +A+++FDE+ RD N
Sbjct: 105 LCSHSL-------LIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYN 157
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD-LDIK 240
L+ Y K G + A +LF+ MP R+ VSW +V+GYAQ+ + EEA++ F M + ++
Sbjct: 158 ALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQ 217
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + + S L ACA +G +E G+ + Y + + +++ L++ Y+KCG I A ++
Sbjct: 218 PNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQV 277
Query: 301 FES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
F+ ++++L +WN+M++ A+HGL R +L F ++ A +KPDG+T +G ++ C+H GL
Sbjct: 278 FQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGL 337
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E + FD ME+ + + ++HYGCM DLLGRAGL+ E+ +I MP+ D +W LL
Sbjct: 338 VNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALL 397
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C HGNVE+AE A + ++ L+P++ +L+++YA++ +W+ V ++ + L KK
Sbjct: 398 GACSFHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKK 457
Query: 480 NAGCSLIQLNG 490
+AG S I+L+G
Sbjct: 458 SAGYSFIELDG 468
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 258/487 (52%), Gaps = 29/487 (5%)
Query: 19 IHAHFLTKGLLFLSPCHILTTILYAITTF-KPISSASSPTTDPLSYALSIFNNIPYPSTF 77
IH +GLL + H+ T +L A +P +A +F+ +P P
Sbjct: 33 IHGLLFKEGLLH-AGSHLPTALLSAYAALGRP------------RHARDLFDEMPDPGLV 79
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA------- 130
+ + RAH A+ +F M + PD + L AC S A
Sbjct: 80 TRTAMARAHAASGQTAQALAVFGDMLADGVLPDNVALAVALAACHGTGSFPAALGMAAAR 139
Query: 131 ---QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+ +H+ ++ G + DVFV L+ +Y + L ++ LFD + + VS N ++ Y
Sbjct: 140 RPGKMVHALIVTSGIVPDVFVSTELIRLYGEYGELLVSRRLFDAMPVKSTVSWNAMVHQY 199
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---IKPDNI 244
++ ++ A +LF MP RD VSW T++AGY + EA++LF MM + P+
Sbjct: 200 IRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCPVHPNGP 259
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+ + L+ACA G LE G +H YI+ N++ D L L+D YAKCG I A+++FE +
Sbjct: 260 TISTVLAACAGAGCLETGIWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVFEKA 319
Query: 305 Q-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+++L++W ++ GLAMHG +L F M + I+PD VT++G L C+H GLVDE
Sbjct: 320 PGKRDLYSWTTVICGLAMHGKAADALRMFGMMQDNGIRPDDVTLVGVLNACAHGGLVDEG 379
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
F +E Y ++ +++HYGC+ DLLGR G ++EA +I+ M M + +W L C+
Sbjct: 380 LHHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRMKPNAVIWGAFLNACK 438
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H NVE+ E AA + +L P+D +L+ +YA A W + + RR +++ ++KK GC
Sbjct: 439 VHSNVELGEIAAAELTRLDPDDPWAKVMLSSLYAKAQDWSSLARERREMNSLQMKKTPGC 498
Query: 484 SLIQLNG 490
S I+L+G
Sbjct: 499 SSIELDG 505
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 231/430 (53%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A IF+ +P + ++ +I + A+ L +M+ + P+ ++ +L+
Sbjct: 248 ISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQG 307
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + +H +++ G+ +++V+N+L+ +YC
Sbjct: 308 CTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYC----------------------- 344
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
K G L AR+LF +P RD V+W +V GYAQ +EAI LF M IK
Sbjct: 345 --------KCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + SAL++C+ L++GK+IH+ + +D +L + LV YAKCG ++ A +
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F E+N+ W AM+ G A HG R +L YF +M + IKPD VT L C+H GLV
Sbjct: 457 FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLV 516
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E RK F M YG+ ++HY C DLLGRAG +EEA +I MP VW LL
Sbjct: 517 EEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIH +VE E AAE+V+KL P+D G Y L+++YA A R+ED K+R+ ++ + K
Sbjct: 577 ACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKE 636
Query: 481 AGCSLIQLNG 490
G S I+++G
Sbjct: 637 PGQSWIEVDG 646
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 195/447 (43%), Gaps = 48/447 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
R ++++Q ++HA L G+ P L L ++ + S L+ A +F
Sbjct: 108 RLRSLEQGREVHAAILKSGI---QPNRYLENTL--LSMYAKCGS--------LTDARRVF 154
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ I + S+ +I A + L A + M+ PD +F LL A +
Sbjct: 155 DGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQ 214
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ Q +H ++ K G + V SL+ +Y
Sbjct: 215 VGQKVHMEIAKAGLELEPRVGTSLVGMY-------------------------------A 243
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
K GD++ A+ +FD++P ++ V+W L+AGYAQ Q + A++L M ++ P+ I S
Sbjct: 244 KCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTS 303
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L C LE GK +HRYI + + ++ L+ Y KCG + A ++F ++
Sbjct: 304 ILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRD 363
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ TW AM+ G A G ++ F RM + IKPD +T AL CS + E + +
Sbjct: 364 VVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQ 423
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
++ G S ++ + + + G +++A + +M +V W+ ++ GC HG
Sbjct: 424 QLVHA-GYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSE-RNVVAWTAMITGCAQHGRC 481
Query: 429 EIAEAAAEHVMK--LKPEDGGVYKVLA 453
A E + K +KP+ VL+
Sbjct: 482 REALEYFEQMKKQGIKPDKVTFTSVLS 508
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 35/309 (11%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
F LL+ C++L S + +H+ +LK G + ++ N+L+ +Y L DA+ +FD I
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
R++V SW ++ + +Q EA + +
Sbjct: 159 DRNIV-------------------------------SWTAMIEAFVAGNQNLEAYKCYET 187
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M KPD + VS L+A L+ G+ +H I + ++ + T LV YAKCG
Sbjct: 188 MKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGD 247
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
I+ A IF+ EKN+ TW ++ G A G ++L +M +A + P+ +T L G
Sbjct: 248 ISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQG 307
Query: 354 CSHAGLVDEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C+ ++ +K+ ++S YG +E+ + + + G ++EA ++ +P DV
Sbjct: 308 CTTPLALEHGKKVHRYIIQSGYG--REIWVVNALITMYCKCGGLKEARKLFGDLPH-RDV 364
Query: 413 FVWSGLLGG 421
W+ ++ G
Sbjct: 365 VTWTAMVTG 373
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 2/182 (1%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L CARL LEQG+ +H I + I+ + +L L+ YAKCG + A +F+ +++N+
Sbjct: 103 LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNI 162
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+W AM+ + + M A KPD VT + L ++ L+ +K+ E
Sbjct: 163 VSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHME 222
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ G+ E + + + + G I +A + K+P +V W+ L+ G G V+
Sbjct: 223 IAKA-GLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPE-KNVVTWTLLIAGYAQQGQVD 280
Query: 430 IA 431
+A
Sbjct: 281 VA 282
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 256/453 (56%), Gaps = 16/453 (3%)
Query: 44 ITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR 103
+ T+ + + + D L A F+ +P S S+N ++ + + LF +M
Sbjct: 194 VITWTAMVTGYAKVKD-LEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMV 252
Query: 104 TVSIPPDFYSFPFLLRACSQ----LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
I PD ++ ++ ACS + SL +T+H + ++L + FV +L+ +Y
Sbjct: 253 NAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL----NCFVRTALLDMYAKC 308
Query: 160 HRLRDAQELFDEI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
+ A+ +FDE+ YR+ V+ N +I Y + G+L AR+LF+ MP R+ V+W +++AGY
Sbjct: 309 GSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGY 368
Query: 219 AQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
AQ+ Q AI+LF M+ + PD + +VS +SAC LG LE G + R++ NQI++
Sbjct: 369 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLS 428
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
++ Y++CG + A +F+ +++ ++N ++ G A HG G ++ S M E
Sbjct: 429 ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKE 488
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
I+PD VT +G L CSHAGL++E RK+F+ ++ + HY CM DLLGR G +E
Sbjct: 489 GGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELE 543
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
+A +++MPM V+ LL RIH VE+ E AA + +L+P++ G + +L+++YA
Sbjct: 544 DAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYA 603
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+A RW+DV +IR ++ G +KK G S ++ G
Sbjct: 604 SAGRWKDVERIREAMKKGGVKKTTGWSWVEYGG 636
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 203/437 (46%), Gaps = 79/437 (18%)
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
P Y +FN+ P+ F + +++R ++ V++F M+ + PD + +P L++
Sbjct: 49 PPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIK 108
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRLRD----- 164
+ + H+ VLKLG D FV N+++ +Y VF + D
Sbjct: 109 SAG-----NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKV 163
Query: 165 ------------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR 206
AQ LFD + R+V++ ++ GY K DL AR+ FD MP R
Sbjct: 164 ADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPER 223
Query: 207 DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH 266
VSW +++GYAQ+ EE ++LF M++ I+PD V+ +SAC+ G+ ++
Sbjct: 224 SVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLV 283
Query: 267 RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF------------------------- 301
R + QI+++ F+ T L+D YAKCG I A IF
Sbjct: 284 RTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNL 343
Query: 302 ESSQE-------KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVG 353
+S++E +N+ TWN+M+ G A +G +++ F MI A ++ PD VT++ +
Sbjct: 344 DSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISA 403
Query: 354 CSHAGLVDEAR---KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
C H G ++ + E + +S + M + R G +E+A + ++M
Sbjct: 404 CGHLGALELGNWVVRFLTENQIKLSISG----HNAMIFMYSRCGSMEDAKRVFQEMAT-R 458
Query: 411 DVFVWSGLLGGCRIHGN 427
DV ++ L+ G HG+
Sbjct: 459 DVVSYNTLISGFAAHGH 475
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 231/371 (62%), Gaps = 11/371 (2%)
Query: 124 LCSHSLAQTIHSQVLKLGFIC--DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
LCSHSL ++KLG D F+ ++L+ Y L +A+++FDE+ RD N
Sbjct: 105 LCSHSL-------LIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYN 157
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD-LDIK 240
L+ Y K G + A +LF+ MP R+ VSW +V+GYAQ+ + EEA++ F M + ++
Sbjct: 158 ALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQ 217
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + + S L ACA +G +E G+ + Y + + +++ L++ Y+KCG I A ++
Sbjct: 218 PNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQV 277
Query: 301 FES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
F+ ++++L +WN+M++ A+HGL R +L F ++ A +KPDG+T +G ++ C+H GL
Sbjct: 278 FQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGL 337
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E + FD ME+ + + ++HYGCM DLLGRAGL+ E+ +I MP+ D +W LL
Sbjct: 338 VNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALL 397
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C HGNVE+AE A + ++ L+P++ +L+++YA++ +W+ V ++ + L KK
Sbjct: 398 GACSFHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKK 457
Query: 480 NAGCSLIQLNG 490
+AG S I+L+G
Sbjct: 458 SAGYSFIELDG 468
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 268/505 (53%), Gaps = 55/505 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA-------------ITTFKPISS--- 52
+ K K+ QIH H L G H +YA I++ + + S
Sbjct: 101 KSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTA 160
Query: 53 --ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPP 109
A + + A +F+ IP S+N +I + + A+ LF +M ++ + P
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRP 220
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D + ++ AC+Q S L + +HS + GF ++ ++N+L
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNAL----------------- 263
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
ID Y K G++ A +LFD + +D +SW TL+ GY + +EA+
Sbjct: 264 --------------IDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALL 309
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI--ELNQIRVD-SFLSTGLVD 286
LF M+ P+++ ++S L ACA LG ++ G+ IH YI +L + + S L T L+D
Sbjct: 310 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLID 369
Query: 287 FYAKCGYINTAIEIFESS-QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
YAKCG I+ A ++F+SS ++L TWNAM+ G AMHG + FSRM I+PD +
Sbjct: 370 MYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDI 429
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T +G L CSH+G++D R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI
Sbjct: 430 TFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINT 489
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
MPM D +W LL C+IHGN+E+ E+ A+ ++K++P + G Y +L+++YA A RW +V
Sbjct: 490 MPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEV 549
Query: 466 VKIRRSL-DAGKIKKNAGCSLIQLN 489
KIR L D G KK GCS I+++
Sbjct: 550 AKIRALLNDKGMKKKVPGCSSIEID 574
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 229/425 (53%), Gaps = 25/425 (5%)
Query: 16 IHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPS 75
+ IHA + GL H L + F +S P D YA+S+F+ I P+
Sbjct: 4 VRXIHAQMIKTGL------HNTNYALSKLLEFCVVS----PHFDGFPYAISVFDTIQEPN 53
Query: 76 TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS 135
+NT+ R H L S P++A+ L+ M ++ + PD Y+FPFLL++C++ Q IH
Sbjct: 54 LLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHG 113
Query: 136 QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
VLKLGF D++V SL+ +Y RL DA+++FD +RDVVS LI GYV G +
Sbjct: 114 HVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIES 173
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPDNIALVSALSACA 254
A++LFD +P +D VSW +++GY ++ +EA++LF MM + +++PD +V+ +SACA
Sbjct: 174 AQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACA 233
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
+ +E G+++H +I + + + L+D Y+K G + TA E+F+ K++ +WN
Sbjct: 234 QSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNT 293
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
++ G L + +L+ F M+ + P+ VT+L L C+H G +D R + VY
Sbjct: 294 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH-----VY 348
Query: 375 GVSKELKH--------YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
++K+LK + D+ + G I+ A ++ + W+ ++ G +HG
Sbjct: 349 -INKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHG 407
Query: 427 NVEIA 431
A
Sbjct: 408 RANAA 412
>gi|147828480|emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
Length = 841
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 277/558 (49%), Gaps = 109/558 (19%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
++KQ Q+HA L GL L P I + + SAS+ + Y S+ ++
Sbjct: 12 SVKQAKQVHALILIHGLSHLEP----------ILARQILJSASNYSATVAQYVHSVLHHS 61
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P +FS+ IR T A L+ QM+ + P ++ L+AC+++
Sbjct: 62 KSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGL 121
Query: 132 TIHSQVLKLGFICD---VFVLNSLMHVYC----------VFHRLRD-------------- 164
+IH QV K GF ++V +L+ YC +F + +
Sbjct: 122 SIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 181
Query: 165 -------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHA--------------------- 196
AQ +FDEI +DV+S N++I GY +AGD+ A
Sbjct: 182 KSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISG 241
Query: 197 ----------RQLFDRMPFRDAVSWGTLVAGY---------------------------- 218
R FD MP + VSW T+++GY
Sbjct: 242 YVEFGDIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI 301
Query: 219 ---AQSDQCEEAIQLFCNMM--DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
AQ+ + +EA++LF NM+ D++++PD + L S +SAC++LG+L G I Y+
Sbjct: 302 ACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLG 361
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
I +D L+T L+D YAKCG I+ A E+F ++K+L + AM++G ++G ++ F
Sbjct: 362 IEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFD 421
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
M++A+I P+ +T +G L +HAGLV+E + F M+ Y + + HYG M DLLGRA
Sbjct: 422 EMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLLGRA 480
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
G ++EALE+IK MPM VW LL CR+H NVE E AA+H +L+P+ G +L+
Sbjct: 481 GRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYXSLLS 540
Query: 454 DVYANADRWEDVVKIRRS 471
++YA+ +RW+DV ++R+S
Sbjct: 541 NIYASGERWDDVKRLRKS 558
>gi|115486992|ref|NP_001065983.1| Os12g0114400 [Oryza sativa Japonica Group]
gi|113648490|dbj|BAF29002.1| Os12g0114400, partial [Oryza sativa Japonica Group]
Length = 504
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 266/513 (51%), Gaps = 65/513 (12%)
Query: 17 HQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPST 76
HQ+HA GLL S L A+ + P P ALS+ P P+
Sbjct: 7 HQLHALLAKLGLLHRS------EFLSALLSRLP----------PSPSALSLLLEAP-PAV 49
Query: 77 FSYNTIIRAHTLFSS---PLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT- 132
S + + FSS P +A++LF+ + S+P +FP LL++C++ +HS +
Sbjct: 50 LSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTFPALLKSCARAFNHSSRASA 109
Query: 133 ----------IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+H +VLKLG D +V N+L+ +Y F RL DA++ FDE+ ++ VS N
Sbjct: 110 ASVFVSKGMELHCRVLKLGCGKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNA 169
Query: 183 LIDGY-------------------------------VKAGDLAHARQLFDRMPFRDAVSW 211
L+ + V+ G + A ++F MP RDAVSW
Sbjct: 170 LVGAHRAAADWMGADRVSQAMPVRNLSWWNAEIARNVRIGYMDEAARIFSEMPERDAVSW 229
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
+L++GY + + +A+ +F M + I+P + LV L ACA++G+L+ G NIHR ++
Sbjct: 230 NSLISGYTKLGKYTQALGIFQEMQENGIQPTELTLVLVLGACAKIGKLDLGTNIHRNLQN 289
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
I D + L+D YAKCG ++ A ++F+ +++ WNAM+VG ++HG R +L
Sbjct: 290 KGIVADGLVGNALIDMYAKCGMLDLAKKVFDRMSMRDITCWNAMIVGFSVHGCSREALEL 349
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M +I+P+ VT LG L CSH GLV+E RK F+ M Y + ++KHYGCM D+L
Sbjct: 350 FDSM---KIEPNPVTFLGVLTACSHGGLVNEGRKYFNSMIEDYRIVPDVKHYGCMIDMLC 406
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
R G IEEA MIK+ P +W LL CR+HG++++A + +L D G
Sbjct: 407 RYGKIEEAYLMIKENPSTASSVLWKMLLAACRVHGHIDLAYMFFHELRELILTDNGGLVT 466
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+++VYA A RW+DV +R + K+A S
Sbjct: 467 ISNVYAEAKRWDDVEHLRMKVRCNSALKHAAHS 499
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 251/430 (58%), Gaps = 11/430 (2%)
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV---SIPPDFYSFPFLLR 119
YA+++F+++ P F ++R L PL +FS +R +P ++F L +
Sbjct: 95 YAVAVFSSLSPPDPFLAAALLRFAHLTQPPLETFRVFSGLRRAHGRDLPFLPFAFSPLAK 154
Query: 120 ACSQLCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+ + S A H+ L LG F FV NSL+ Y + A+++ DE++ +DV+
Sbjct: 155 SAAAARSLPAAAGAHAVSLLLGGFDKHRFVENSLIGAYVACGDVGAARKVLDEMVVKDVI 214
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S +++ Y ++ D+ A ++F P +D V+W +V GYAQ+ +A++ F M
Sbjct: 215 SWTSIVAAYSRSRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAGAG 274
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ D ++L A+SACA+LG + + I + + + + + +GLVD YAKCG I+ A
Sbjct: 275 MPIDEVSLTGAISACAQLGAVRRAVWIQEIADRSGLGRNVVVGSGLVDMYAKCGLIDEAC 334
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHA 357
+FE QEKN++T+++M+VGLA HG ++ F+ M+ A ++P+ VT +G L CSHA
Sbjct: 335 RVFEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVLTACSHA 394
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM---PMGGDVFV 414
G+V E R F +M+ YG+ HY CM DLLGRAGL+ EAL+++K M P GG V
Sbjct: 395 GMVKEGRYYFAQMKDRYGILPSADHYTCMVDLLGRAGLVIEALDLVKSMTVEPHGG---V 451
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LLG CRIHGN ++A+ AA+H+ KL+PE G Y +L++ A+A W++V K+R+ +
Sbjct: 452 WGALLGACRIHGNTKVAKVAAQHLFKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKLMRI 511
Query: 475 GKIKKNAGCS 484
+KK+ S
Sbjct: 512 RGLKKDPAVS 521
>gi|253761503|ref|XP_002489130.1| hypothetical protein SORBIDRAFT_0019s004710 [Sorghum bicolor]
gi|241947229|gb|EES20374.1| hypothetical protein SORBIDRAFT_0019s004710 [Sorghum bicolor]
Length = 489
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 262/495 (52%), Gaps = 47/495 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L+ RC T + ++HA + G L + +L A P DP
Sbjct: 20 NLSLLADRCATPSALARVHAAMIVSGRL-AEDAFAASRLLTAYAALSP---------DPA 69
Query: 62 SYALSIFNNIP-YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLR 119
+ AL++ +++P P++F NT +R P A FS++R T ++ P ++FPFLL+
Sbjct: 70 AAALALLSSLPCAPNSFMLNTTLRVLASSPDPAAAFPFFSRLRVTGALAPGRHTFPFLLK 129
Query: 120 ACSQL-CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A ++L + + +H+ ++ G + D +V
Sbjct: 130 AAARLPLPLPVTEQLHALAVRHGVLLDAYV------------------------------ 159
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
N L+ GY AG L AR++FD +P R+ + T+V+ YAQ+ + E+A+ F M+ +
Sbjct: 160 -ANGLVRGYSVAGRLQAARRVFDELPERNPAVYTTMVSAYAQNGRHEDAMAAFDEMVRVG 218
Query: 239 IKPDNIALVSALSACARL--GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+P L S LSACAR G LE G ++H + + V + L T L+D Y K G I
Sbjct: 219 FEPCGATLASVLSACARSASGGLEMGCHVHDLMTAWGVPVSTILGTALIDMYVKNGAIKE 278
Query: 297 AIEIFESSQEKNLF-TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A + + E+++ WNA++ GLA HG +L F +M + + P+ T++GAL CS
Sbjct: 279 AFAVLDGLPERHVTGAWNALISGLAHHGHRERALNLFRQMQQEGVPPNATTLVGALSACS 338
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GL+DEAR+LF ME +G++ ++HYGCM DLLGRAGL+ EA ++I+ M D +W
Sbjct: 339 HPGLLDEARRLFSSMEKDFGITPAIQHYGCMVDLLGRAGLLSEAEDLIRGMSCEADTVIW 398
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL C+ H +EIAE AA ++KL P + GVY VL+++YA A RW+DV K+R+ +
Sbjct: 399 GALLTACKNHSGIEIAERAAVEMLKLDPSNHGVYVVLSNLYAEAGRWQDVDKLRKEMKGA 458
Query: 476 KIKKNAGCSLIQLNG 490
++ K G S + +G
Sbjct: 459 RLSKIPGASTVNGDG 473
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 246/434 (56%), Gaps = 6/434 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
+ A++ F + ++N++I + L A+ +FS+M R + PD ++ +L
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLS 287
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD--V 177
AC+ L + + IHS ++ GF VLN+L+ +Y + A+ L ++ +D +
Sbjct: 288 ACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
L+DGY+K GD+ A+ +FD + RD V+W ++ GY Q EAI LF +M+
Sbjct: 348 EGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGE 407
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+ +P++ L + LS + L L GK IH ++ +I S +S L+ YAK G I +
Sbjct: 408 EQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVS-VSNALITMYAKAGSITS 466
Query: 297 AIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A F+ + E++ +W +M++ LA HG +L F M+ ++PD +T +G C+
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAGLV++ R+ FD M+ V + L HY CM DL GRAGL++EA E I+KMP+ DV W
Sbjct: 527 HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL CR++ N+++ + AAE ++ L+PE+ G Y LA++Y+ +WE+ KIR+S+ G
Sbjct: 587 GSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDG 646
Query: 476 KIKKNAGCSLIQLN 489
++KK G S I++
Sbjct: 647 RVKKEQGFSWIEVK 660
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 174/395 (44%), Gaps = 83/395 (21%)
Query: 109 PDFYSFPFLLRACSQLCSHSL--------AQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
P S LL C+ L S+ AQ +H +V+K G + V+++N+LM+VY
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
A++LFDE+ R S NT++ Y K GD+ + + FDR+P RD+VSW T++ GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
Q +AI++ MM I+P L + L++ A LE GK +H +I +R + +
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183
Query: 281 STGLVDFYAKC-------------------------------GYINTAIEIFESSQEKNL 309
S L++ YAKC G ++ A+ FE E+++
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGC-------------- 354
TWN+M+ G G +L FS+M+ ++ + PD T+ L C
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHS 303
Query: 355 ---------------------SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG-- 391
S G V+ AR+L ++ +K+LK G A L G
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG-----TKDLKIEGFTALLDGYI 358
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ G + EA + + DV W+ ++ G HG
Sbjct: 359 KLGDMNEAKNIFDSLK-DRDVVAWTAMIVGYEQHG 392
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 205/468 (43%), Gaps = 59/468 (12%)
Query: 19 IHAHFLTKGLLFL-----SPCHILTTILYAITTFK-----PISSASSPTTDPLSYA---- 64
+H + GL+F + ++ + YA+ K P+ +A S T +YA
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 65 ----LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
F+ +P + S+ T+I + A+ + +M I P ++ +L +
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ + +HS ++KLG +V V NSL+++Y A+ +FD ++ +D+ S
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSW 215
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDI 239
N +I +++ G + A F++M RD V+W ++++GY Q A+ +F M+ D +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSML 275
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYI-----ELNQIRVDSFLS------------- 281
PD L S LSACA L +L G+ IH +I +++ I +++ +S
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 282 ---------------TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
T L+D Y K G +N A IF+S +++++ W AM+VG HGL
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYG 395
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD---EMESVYGVSKELKHY 383
++ F M+ +P+ T+ L S + +++ + +Y VS
Sbjct: 396 EAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVS---- 451
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + +AG I A + D W+ ++ HG+ E A
Sbjct: 452 NALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
>gi|15239985|ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g43790
gi|10177948|dbj|BAB11307.1| unnamed protein product [Arabidopsis thaliana]
gi|332007627|gb|AED95010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 460
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 264/491 (53%), Gaps = 52/491 (10%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
N I +CK+++ + QIHA +T GL + Y ++ +SS T LSYA
Sbjct: 14 NLISKCKSLQNLKQIHAQIITIGL---------SHHTYPLSKLLHLSS-----TVCLSYA 59
Query: 65 LSIFNNIPYPSTFSYNTIIRA----HTLFSSPLNAVVLFSQM---RTVSIPPDFYSFPFL 117
LSI IP PS F YNT+I + H + L A L+ Q+ R+ + P+ +++P L
Sbjct: 60 LSILRQIPNPSVFLYNTLISSIVSNHNSTQTHL-AFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 118 LRACS-QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+A H + +H+ VLK F E + D
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLK-----------------------------FLEPVNHD 149
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
L+ Y G L AR LF+R+ D +W TL+A YA S++ + ++ M
Sbjct: 150 RFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMR 209
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+ ++P+ ++LV+ + +CA LGE +G H Y+ N + ++ F+ T L+D Y+KCG ++
Sbjct: 210 MQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSF 269
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A ++F+ ++++ +NAM+ GLA+HG G+ + + +I + PD T + + CSH
Sbjct: 270 ARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSH 329
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLVDE ++F+ M++VYG+ +++HYGC+ DLLGR+G +EEA E IKKMP+ + +W
Sbjct: 330 SGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWR 389
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LG + HG+ E E A +H++ L+ E+ G Y +L+++YA +RW DV K R + +
Sbjct: 390 SFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHR 449
Query: 477 IKKNAGCSLIQ 487
+ K+ G S +
Sbjct: 450 VNKSPGISTLN 460
>gi|77553484|gb|ABA96280.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125578286|gb|EAZ19432.1| hypothetical protein OsJ_34992 [Oryza sativa Japonica Group]
Length = 518
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 266/513 (51%), Gaps = 65/513 (12%)
Query: 17 HQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPST 76
HQ+HA GLL S L A+ + P P ALS+ P P+
Sbjct: 21 HQLHALLAKLGLLHRS------EFLSALLSRLP----------PSPSALSLLLEAP-PAV 63
Query: 77 FSYNTIIRAHTLFSS---PLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT- 132
S + + FSS P +A++LF+ + S+P +FP LL++C++ +HS +
Sbjct: 64 LSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTFPALLKSCARAFNHSSRASA 123
Query: 133 ----------IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+H +VLKLG D +V N+L+ +Y F RL DA++ FDE+ ++ VS N
Sbjct: 124 ASVFVSKGMELHCRVLKLGCGKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNA 183
Query: 183 LIDGY-------------------------------VKAGDLAHARQLFDRMPFRDAVSW 211
L+ + V+ G + A ++F MP RDAVSW
Sbjct: 184 LVGAHRAAADWMGADRVSQAMPVRNLSWWNAEIARNVRIGYMDEAARIFSEMPERDAVSW 243
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
+L++GY + + +A+ +F M + I+P + LV L ACA++G+L+ G NIHR ++
Sbjct: 244 NSLISGYTKLGKYTQALGIFQEMQENGIQPTELTLVLVLGACAKIGKLDLGTNIHRNLQN 303
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
I D + L+D YAKCG ++ A ++F+ +++ WNAM+VG ++HG R +L
Sbjct: 304 KGIVADGLVGNALIDMYAKCGMLDLAKKVFDRMSMRDITCWNAMIVGFSVHGCSREALEL 363
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M +I+P+ VT LG L CSH GLV+E RK F+ M Y + ++KHYGCM D+L
Sbjct: 364 FDSM---KIEPNPVTFLGVLTACSHGGLVNEGRKYFNSMIEDYRIVPDVKHYGCMIDMLC 420
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
R G IEEA MIK+ P +W LL CR+HG++++A + +L D G
Sbjct: 421 RYGKIEEAYLMIKENPSTASSVLWKMLLAACRVHGHIDLAYMFFHELRELILTDNGGLVT 480
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+++VYA A RW+DV +R + K+A S
Sbjct: 481 ISNVYAEAKRWDDVEHLRMKVRCNSALKHAAHS 513
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 235/431 (54%), Gaps = 31/431 (7%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
D L A FN +P ++N II ++ + + A+ LF +M I + + +L
Sbjct: 408 DLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTIL 467
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
++ + L + + +H +K GF D++V+NSL
Sbjct: 468 KSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL-------------------------- 501
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
ID Y K + A ++F+ D VS+ +++ YAQ Q EEA++LF M D++
Sbjct: 502 -----IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 556
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KPD S L+ACA L EQGK +H +I +D F LV+ YAKCG I+ A
Sbjct: 557 LKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAG 616
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
F E+ + +W+AM+ GLA HG GR +L F++M++ + P+ +T++ L C+HAG
Sbjct: 617 RAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG 676
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV EA+ F+ ME ++G +HY CM DLLGRAG I EA+E++ KMP + VW L
Sbjct: 677 LVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGAL 736
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG RIH +VE+ AAE + L+PE G + +LA++YA+A +WE+V ++RR + K+K
Sbjct: 737 LGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVK 796
Query: 479 KNAGCSLIQLN 489
K G S I++
Sbjct: 797 KEPGMSWIEVK 807
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 65/432 (15%)
Query: 1 MTLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPC---HILTTILYAITTFKPISSAS 54
++ + + +C T K + QIHAH +TK L P H++ LY+
Sbjct: 57 VSYSKLLSQCCTTKSLRPGLQIHAH-ITKSGLSDDPSIRNHLIN--LYS----------- 102
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
YA + + P S++ +I + A++ F +M + + + ++F
Sbjct: 103 --KCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTF 160
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
+L+ACS + + + +H V+ GF DVFV N+L+ +Y D++ LFDEI
Sbjct: 161 SSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE 220
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
R+VVS W L + Y Q D C EA+ LF M
Sbjct: 221 RNVVS-------------------------------WNALFSCYVQIDFCGEAVGLFYEM 249
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ IKP+ +L S ++AC L + +GK IH Y+ D F + LVD YAK G +
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
AI +FE ++ ++ +WNA++ G +H +L +M + I P+ T+ AL C
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKAC 369
Query: 355 SHAGLVDEARKLFD-----EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
+ GL + R+L +MES VS L D+ + L+E+A +P
Sbjct: 370 AGMGLKELGRQLHSSLMKMDMESDLFVSVGL------VDMYSKCDLLEDARMAFNLLPE- 422
Query: 410 GDVFVWSGLLGG 421
D+ W+ ++ G
Sbjct: 423 KDLIAWNAIISG 434
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 211/521 (40%), Gaps = 108/521 (20%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTT--ILYAITTFKPISSASSP 56
T ++ +K C +K + Q+H + G F + T ++YA
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSG--FEGDVFVANTLVVMYA------------- 203
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
D + +F+ IP + S+N + + AV LF +M I P+ +S
Sbjct: 204 KCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSS 263
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
++ AC+ L S + IH ++KLG+ D F
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPF----------------------------- 294
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
S N L+D Y K GDLA A +F+++ D VSW ++AG + E+A++L M
Sbjct: 295 --SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
I P+ L SAL ACA +G E G+ +H + + D F+S GLVD Y+KC +
Sbjct: 353 SGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLED 412
Query: 297 AIEIFESSQEKNLFTWNAMLVG--------------LAMH--GLG--------------R 326
A F EK+L WNA++ G + MH G+G
Sbjct: 413 ARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAG 472
Query: 327 LSLVYFSRMIEARIKPDG----VTILGALVG----CSHAGLVDEARKLFDEMESVYGVSK 378
L +V+ R + G + ++ +L+ CSH V++A ++F+E
Sbjct: 473 LQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH---VEDAERIFEEC-----TIG 524
Query: 379 ELKHYGCMADLLGRAGLIEEALEM---IKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
+L + M + G EEAL++ ++ M + D FV S LL C E +
Sbjct: 525 DLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLH 584
Query: 436 EHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
H++K Y + D++A K DAG+
Sbjct: 585 VHILK--------YGFVLDIFAGNSLVNMYAKCGSIDDAGR 617
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 33/367 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A+S+F I P S+N +I L A+ L QM+ I P+ ++ L+A
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKA 368
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + L + +HS ++K+ D+FV
Sbjct: 369 CAGMGLKELGRQLHSSLMKMDMESDLFV-------------------------------S 397
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D Y K L AR F+ +P +D ++W +++GY+Q + EA+ LF M I
Sbjct: 398 VGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIG 457
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ L + L + A L + + +H + D ++ L+D Y KC ++ A I
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +L ++ +M+ A +G G +L F M + +KPD L C++
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++ ++L + YG ++ + ++ + G I++A ++ G + WS ++G
Sbjct: 578 EQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERG-IVSWSAMIG 635
Query: 421 GCRIHGN 427
G HG+
Sbjct: 636 GLAQHGH 642
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 18/351 (5%)
Query: 86 HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICD 145
H F PL+ + + +P F P L++ Q I + + K F
Sbjct: 6 HHSFQKPLH--------QRLHLP--FKPAPKLIQTVPQFSQDPQTTAILNLIDKGNFTPT 55
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEI----LYRDVVSCNTLIDGYVKAGDLAHARQLFD 201
+ L+ C LR ++ I L D N LI+ Y K + +AR+L D
Sbjct: 56 SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVD 115
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQ 261
D VSW L++GYAQ+ A+ F M L +K + S L AC+ + +L
Sbjct: 116 ESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRI 175
Query: 262 GKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
GK +H + ++ D F++ LV YAKC + +F+ E+N+ +WNA+
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR-KLFDEMESVYGVSKEL 380
++ F M+ + IKP+ ++ + C+ GL D +R K+ G +
Sbjct: 236 IDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYDWDP 293
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ D+ + G + +A+ + +K+ D+ W+ ++ GC +H + E A
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQ-PDIVSWNAVIAGCVLHEHHEQA 343
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 140/333 (42%), Gaps = 52/333 (15%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
TL+ +K ++ +H Q+H + G F S +++ +++ + + A
Sbjct: 462 TLSTILKSTAGLQVVHVCRQVHGLSVKSG--FHSDIYVVNSLIDSYGKCSHVEDAER--- 516
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
IF S+ ++I A+ + A+ LF +M+ + + PD + LL
Sbjct: 517 --------IFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLL 568
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC+ L + + +H +LK GF+ D+F NSL+++Y + DA F E+ R +V
Sbjct: 569 NACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIV 628
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S + +I G + G H RQ A+QLF M+
Sbjct: 629 SWSAMIGGLAQHG---HGRQ----------------------------ALQLFNQMLKEG 657
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ P++I LVS L AC G + + K + EL + ++D + G IN A
Sbjct: 658 VSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEA 717
Query: 298 IEIFESSQ-EKNLFTWNAMLVGLAMHG---LGR 326
+E+ E N W A+L +H LGR
Sbjct: 718 VELVNKMPFEANASVWGALLGAARIHKDVELGR 750
>gi|297846398|ref|XP_002891080.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336922|gb|EFH67339.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 261/496 (52%), Gaps = 52/496 (10%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+ I+ C T QI Q+ +HFLT G H ++ L + + A SP D LS
Sbjct: 6 METMIQNCVTFSQIKQLQSHFLTAG-------HFQSSFLRSRLLER---CAISPFGD-LS 54
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP-----DFYSFPFL 117
+A+ IF +IP P T +N IIR S P A + M S D + F
Sbjct: 55 FAVKIFRHIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQRSSSSALCRVDALTCSFT 114
Query: 118 LRACSQ-LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
L+AC++ LCS ++ Q IH Q+ + GF D +
Sbjct: 115 LKACARALCSSAMVQ-IHCQISRRGFSADALL---------------------------- 145
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
C TL+D Y K GDL A +LFD M RD SW L+AG ++ EA++L+ M
Sbjct: 146 ---CTTLLDAYSKNGDLISALKLFDEMSVRDVASWNALIAGLVAGNRASEALELYKRMEM 202
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
I+ + +V+AL AC+ LG++++G+ I H YI+ ++ + +S ++D Y+KCG+++
Sbjct: 203 EGIRRSEVTVVAALGACSHLGDVKEGEKILHGYIKDEKLDHNVIVSNAVIDMYSKCGFVD 262
Query: 296 TAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A ++FE + +K++ TWN M+ G ++HG +L F ++ IKPD V+ L AL C
Sbjct: 263 KAFQVFEQFTGKKSVVTWNTMITGFSVHGEAHRALEIFEKLEHNGIKPDDVSYLAALTAC 322
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
H GLV+ +F+ M + GV +KHYGC+ DLL RAG + EA ++I M M D +
Sbjct: 323 RHTGLVEYGISIFNNM-ACNGVEPNMKHYGCVVDLLSRAGRLREAHDIICSMSMVPDPVL 381
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LLG IH NVE+AE A+ + ++ + G + +L++VYA RW+DV +R +++
Sbjct: 382 WQSLLGASEIHNNVEMAEIASRKIKEMGVNNDGDFVLLSNVYAAQGRWKDVGLVRDDMES 441
Query: 475 GKIKKNAGCSLIQLNG 490
++KK G S I+ G
Sbjct: 442 KQVKKVPGISYIEAKG 457
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 235/431 (54%), Gaps = 31/431 (7%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
D L A FN +P ++N II ++ + + A+ LF +M I + + +L
Sbjct: 381 DLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTIL 440
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
++ + L + + +H +K GF D++V+NSL
Sbjct: 441 KSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL-------------------------- 474
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
ID Y K + A ++F+ D VS+ +++ YAQ Q EEA++LF M D++
Sbjct: 475 -----IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 529
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KPD S L+ACA L EQGK +H +I +D F LV+ YAKCG I+ A
Sbjct: 530 LKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAG 589
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
F E+ + +W+AM+ GLA HG GR +L F++M++ + P+ +T++ L C+HAG
Sbjct: 590 RAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG 649
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV EA+ F+ ME ++G +HY CM DLLGRAG I EA+E++ KMP + VW L
Sbjct: 650 LVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGAL 709
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG RIH +VE+ AAE + L+PE G + +LA++YA+A +WE+V ++RR + K+K
Sbjct: 710 LGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVK 769
Query: 479 KNAGCSLIQLN 489
K G S I++
Sbjct: 770 KEPGMSWIEVK 780
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 197/474 (41%), Gaps = 65/474 (13%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTT--ILYAITTFKPISSASSP 56
T ++ +K C +K + Q+H + G F + T ++YA
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSG--FEGDVFVANTLVVMYA------------- 203
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
D + +F+ IP + S+N + + AV LF +M I P+ +S
Sbjct: 204 KCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSS 263
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
++ AC+ L S + IH ++KLG+ D F N+L+ +Y L DA +F++I D
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPD 323
Query: 177 VVSCNT-------------------------------------------LIDGYVKAGDL 193
+VS N L+D Y K L
Sbjct: 324 IVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
AR F+ +P +D ++W +++GY+Q + EA+ LF M I + L + L +
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 443
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
A L + + +H + D ++ L+D Y KC ++ A IFE +L ++
Sbjct: 444 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 503
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+M+ A +G G +L F M + +KPD L C++ ++ ++L +
Sbjct: 504 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK- 562
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
YG ++ + ++ + G I++A ++ G + WS ++GG HG+
Sbjct: 563 YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERG-IVSWSAMIGGLAQHGH 615
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 172/382 (45%), Gaps = 61/382 (15%)
Query: 1 MTLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPC---HILTTILYAITTFKPISSAS 54
++ + + +C T K + QIHAH +TK L P H++ LY+
Sbjct: 57 VSYSKLLSQCCTTKSLRPGLQIHAH-ITKSGLSDDPSIRNHLIN--LYS----------- 102
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
YA + + P S++ +I + A++ F +M + + + ++F
Sbjct: 103 --KCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTF 160
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
+L+ACS + + + +H V+ GF DVFV N+L+ +Y D++ LFDEI
Sbjct: 161 SSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE 220
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
R+VVS W L + Y Q D C EA+ LF M
Sbjct: 221 RNVVS-------------------------------WNALFSCYVQXDFCGEAVGLFYEM 249
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ IKP+ +L S ++AC L + +GK IH Y+ D F + LVD YAK G +
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHG--------LGRLSLVYFSRMIEARIKPDGVT 346
AI +FE ++ ++ +WNA++ G +H LG++ S +++ ++ D
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFV 369
Query: 347 ILGALVGCSHAGLVDEARKLFD 368
+G + S L+++AR F+
Sbjct: 370 SVGLVDMYSKCDLLEDARMAFN 391
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 165/393 (41%), Gaps = 27/393 (6%)
Query: 86 HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICD 145
H F PL+ + + +P F P L++ Q I + + K F
Sbjct: 6 HHSFQKPLH--------QRLHLP--FKPAPKLIQTVPQFSEDPQTTAILNLIDKGNFTPT 55
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEI----LYRDVVSCNTLIDGYVKAGDLAHARQLFD 201
+ L+ C LR ++ I L D N LI+ Y K +AR+L D
Sbjct: 56 SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVD 115
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQ 261
D VSW L++GYAQ+ A+ F M L +K + S L AC+ + +L
Sbjct: 116 ESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRI 175
Query: 262 GKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
GK +H + ++ D F++ LV YAKC + +F+ E+N+ +WNA+
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR-KLFDEMESVYGVSKEL 380
++ F M+ + IKP+ ++ + C+ GL D +R K+ G +
Sbjct: 236 XDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYDWDP 293
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA--------E 432
+ D+ + G + +A+ + +K+ D+ W+ ++ GC +H + E A
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQ-PDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Query: 433 AAAEHVMKLKPEDGGVYKV-LADVYANADRWED 464
+MK+ E V L D+Y+ D ED
Sbjct: 353 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLED 385
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 140/333 (42%), Gaps = 52/333 (15%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
TL+ +K ++ +H Q+H + G F S +++ +++ + + A
Sbjct: 435 TLSTILKSTAGLQVVHVCRQVHGLSVKSG--FHSDIYVVNSLIDSYGKCSHVEDAER--- 489
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
IF S+ ++I A+ + A+ LF +M+ + + PD + LL
Sbjct: 490 --------IFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLL 541
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC+ L + + +H +LK GF+ D+F NSL+++Y + DA F E+ R +V
Sbjct: 542 NACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIV 601
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S + +I G + G H RQ A+QLF M+
Sbjct: 602 SWSAMIGGLAQHG---HGRQ----------------------------ALQLFNQMLKEG 630
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ P++I LVS L AC G + + K + EL + ++D + G IN A
Sbjct: 631 VSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEA 690
Query: 298 IEIFESSQ-EKNLFTWNAMLVGLAMHG---LGR 326
+E+ E N W A+L +H LGR
Sbjct: 691 VELVNKMPFEANASVWGALLGAARIHKDVELGR 723
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/490 (32%), Positives = 270/490 (55%), Gaps = 49/490 (10%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ C T+ ++ Q+H H + G F + +LT +++S D + YA
Sbjct: 12 DILQACNTLPKLAQLHTHIIKLG--FQNNPLVLTKF-----------TSASSNLDAIPYA 58
Query: 65 LSIFNNIPYP---STFSYNTIIRAHTLFS-SPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S+ ++ F ++TIIRA+ S S NA+ ++ M I P+ Y+FPF+L+A
Sbjct: 59 MSLVFSVEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKA 118
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH-RLRDAQELFDEILYRDVVS 179
C+ L +L + +H ++K GF D+FV N+++H+YC + A++LFDE+ D V+
Sbjct: 119 CAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVT 178
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+I GY + G A A LF +M +AG +
Sbjct: 179 WTAMIGGYARLGQSAGAVGLFRKMQ----------IAG---------------------V 207
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD++ +VS LSAC LG LE GK I YIE ++ LS LVD +AKCG ++ A+
Sbjct: 208 CPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALG 267
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F + ++ + +W +++VGLAMHG G ++ F M + + P+ + +G L CSH+GL
Sbjct: 268 LFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGL 327
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+ R+ F EM +G+ +++HYGCM DLL RAGL+ EALE +++MP+ + +W L+
Sbjct: 328 VERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLI 387
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+HG +++ E+ ++ +++ +P Y +L+++Y WE KIR ++ I+K
Sbjct: 388 SACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQK 447
Query: 480 NAGCSLIQLN 489
G ++I+L+
Sbjct: 448 VPGSTMIELD 457
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 265/514 (51%), Gaps = 50/514 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+K + +H+ +++ L + S + ++ A + K +++A +F+ IP
Sbjct: 56 LKTLRTVHSRIISEDLRYNSSLGV--KLMRAYASLKDVATARK-----------VFDEIP 102
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+ N +IR++ + +F M + + PD Y+FP +L+ACS + + +
Sbjct: 103 ERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKK 162
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK--- 189
IH K+G +FV N L+ +Y L +A+ + DE+ RDVVS N+L+ GY +
Sbjct: 163 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQR 222
Query: 190 -------------------AGDLA---------------HARQLFDRMPFRDAVSWGTLV 215
AG +A + + +F +M + VSW ++
Sbjct: 223 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMI 282
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
Y ++ EA++L+ M +PD +++ S L AC L GK IH YIE ++
Sbjct: 283 GVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 342
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L L+D YAKCG ++ A ++FE+ + +++ +W AM+ G G ++ FS+M
Sbjct: 343 PNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKM 402
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
++ + PD + + L CSHAGL++E R F M Y ++ L+H CM DLLGRAG
Sbjct: 403 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 462
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
++EA + I++MPM + VW LLG CR+H N +I AA+ + +L PE G Y +L+++
Sbjct: 463 VKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNI 522
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
YA A RWE+V IR + + +KKN G S +++N
Sbjct: 523 YAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 556
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
+L+ + +H I +R +S L L+ YA + TA ++F+ E+N+ N M+
Sbjct: 55 DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
+G R + F M +KPD T L CS +G + +K+ V G+S
Sbjct: 115 SYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKV-GLS 173
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
L + + G+ G + EA ++ +M DV W+ L+ G
Sbjct: 174 STLFVGNGLVSMYGKCGFLSEARLVLDEMSR-RDVVSWNSLVAG---------------- 216
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
YA R++D +++ R +++ KI +AG
Sbjct: 217 ------------------YAQNQRFDDALEVCREMESVKISHDAG 243
>gi|296086392|emb|CBI31981.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 273/514 (53%), Gaps = 48/514 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
+L + ++ C +I Q+H + GL+ + T + ++S TD
Sbjct: 33 SLISLLESCTQTSEICQVHGSMVKTGLVNVP------------FTLSKLLASSIQDTD-- 78
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA SIFN IP P+ F +NT++R +++ P A V+F +R + D +SF L+AC
Sbjct: 79 -YAASIFNQIPSPNLFMFNTMLRGYSISHHPKQAFVVFKGLRAQQMILDQFSFIPTLKAC 137
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR-DVVSC 180
++ ++ Q IH V++ G V N+L+H YCV R+ DA +LFDEI + D+VS
Sbjct: 138 ARELAYETGQGIHGVVVRSGHGLFTNVKNALLHFYCVCGRIGDAHQLFDEIPPKIDLVSW 197
Query: 181 NTLIDGYVK-------------------------------AGDLAHARQLFDRMPFRDAV 209
NTL+ GY++ AG + ++F ++P +D V
Sbjct: 198 NTLLGGYLQVPHPTMVTCLFGEMCRKDLNVATALIDMYANAGFIDLGHKIFYQVPKKDVV 257
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
W L+ GYA+SD +E++ L M +KP++ LV LSACA G G I Y+
Sbjct: 258 LWNCLIDGYAKSDLLQESLSLLQLMKREQVKPNSSTLVGLLSACAAAGASSVGLCISNYV 317
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
E QI +D+ L T LVD Y KCG++ AI++FE + K++ +W AM+ G +HG + ++
Sbjct: 318 EEEQIALDAVLGTALVDMYCKCGFLEKAIDVFERMEIKDVKSWTAMISGYGVHGQAKNAI 377
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
+ F RM +P+ VT L L CSH G+V E ++M YG S +++HYGCM DL
Sbjct: 378 MIFHRMEVEGYRPNEVTFLAVLNACSHGGMVVEGISFLEKMVREYGFSPKVEHYGCMIDL 437
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
LGRAGL+EEA +IK +P+ GD W LL CR++GNV++ E ++++ E
Sbjct: 438 LGRAGLLEEAHNLIKSLPIEGDATGWRALLAACRVYGNVDLGECVKRVLLEIFDEHPTDS 497
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+L+ YA A R D +++ + K+ K AGC
Sbjct: 498 ILLSSTYAIAGRLPDYTRMQE-IKEEKMMKEAGC 530
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 279/549 (50%), Gaps = 62/549 (11%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS------ 55
TL + ++ C++ Q HA LT G L SP + +L A+ + ++ +
Sbjct: 12 TLLSRLRACRSASHALQCHALLLTSGHLAASPLRLSNHLLLALASVPSAAALADVVFARL 71
Query: 56 ---PTTDPLSYALSIFNNIP------------------YPSTFSYNTIIRAHTLFSSPLN 94
DP ++ +I + P P +++ +++A
Sbjct: 72 PLPAARDPFAWNTAIRLHAPARPRAALLYFARMRRCGVRPDAYTFPAVLKACGCAPGCRA 131
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
+++ ++ + D ++ L+ ++ + + + G D+ NS++
Sbjct: 132 GLLVHAEAVRRGLAADLFTVNALISFYCRILDIRSGRKVFDEAG--GVSRDLVSWNSMVA 189
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA--HARQLFDRMPFRDAVSWG 212
Y + AQE+FDE+ +D S TLIDGY K G AR+LFD+MP RD V W
Sbjct: 190 GYVGCGEMGLAQEMFDEMPQKDTFSWATLIDGYGKQGGAGVDRARELFDQMPERDLVCWN 249
Query: 213 TLVAGYAQ-------------------------------SDQCEEAIQLFCNMMDLDIKP 241
+++ GYA+ + +EA++ F +M+ ++P
Sbjct: 250 SMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGLRP 309
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D IA V A+SACA+LG LEQG+ +H Y+E ++ D + T L+D Y KCG ++ A+ IF
Sbjct: 310 DRIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAMLIF 369
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
ES E+++ TWN M+VGL HG G ++ F RM + D +++LG L C+HAGLV
Sbjct: 370 ESMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGLVS 429
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E ++F M+ +G+ +++HYG + DLLGRAG +++A I+ MPM +W LL
Sbjct: 430 EGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAA 489
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR H VE+AE + E + L +D GVY +L+++YA+ W DV++IR+ + ++K+
Sbjct: 490 CRSHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDI 549
Query: 482 GCSLIQLNG 490
G S+I+++G
Sbjct: 550 GRSVIEVDG 558
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 233/432 (53%), Gaps = 30/432 (6%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLR 119
++Y+ +F+ P+ NT+IRA +L +P LF +R +S P + S F L+
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALK 121
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C + IH ++ GF+ D ++ +LM +Y DA ++FDEI RD VS
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVS 181
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N LI Y++ LFD+M N +D +
Sbjct: 182 WNVLISCYLRNKRTRDVLVLFDKMK----------------------------NDVDRCV 213
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPDN+ + AL ACA LG L+ GK +H +I+ N + LS LV Y++CG ++ A E
Sbjct: 214 KPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYE 273
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F +E+N+ +W AM+ GLAM+G G+ ++ F+ M++ I P+ T+ G L CSH+GL
Sbjct: 274 VFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGL 333
Query: 360 VDEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
VDE FD M S + + L HYGC+ DLLGRA L+++A +IK M M D +W L
Sbjct: 334 VDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTL 393
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG CR+HGNVE+ E H+++ K E+ G Y +L + Y++ +WE V ++R + +I+
Sbjct: 394 LGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTELRSLMKKKRIQ 453
Query: 479 KNAGCSLIQLNG 490
N GCS I+L G
Sbjct: 454 TNPGCSAIELQG 465
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 213/326 (65%)
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A+ELFD++ RD+V N++IDGY + G + AR LF+ MP R+ +SW ++ G+ + +
Sbjct: 233 ARELFDQMTERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEA 292
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
+EA++ F +M+ I+PD +A V A+SACA+LG LEQG+ +H Y+E ++ D + T L
Sbjct: 293 KEALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTAL 352
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
+D Y KCG ++ A+ IFES E+++ TWN M+VGL HG G +++ F RM R+ D
Sbjct: 353 IDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDD 412
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
+++L L C+HAGLV E ++F M+ +G+ +++HYG + DLLGRAG +++A I+
Sbjct: 413 LSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIE 472
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
MPM +W LL CR H VE+AE + E + L +D GVY +L+++YA+ W D
Sbjct: 473 TMPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGD 532
Query: 465 VVKIRRSLDAGKIKKNAGCSLIQLNG 490
V++IR+ + ++K+ G S+I+++G
Sbjct: 533 VLRIRKLMSDEGMRKDIGRSVIEVDG 558
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 206/432 (47%), Gaps = 59/432 (13%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + ++ C++ Q HA LT G L SP + +L AI AS P PL
Sbjct: 12 TLLSRLRACRSASHAIQCHALLLTSGHLAASPLRLSNLLLLAI--------ASVPGAAPL 63
Query: 62 SYALSIFNNIPYPST---FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ A +F +P P+ F +NT IR H P A++ F++MR+ + PD Y+FP +L
Sbjct: 64 ADA--VFARLPEPAARDPFPWNTAIRLHAP-GRPRAALLYFARMRSCGVRPDAYTFPAVL 120
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI--LYRD 176
+AC +H++ ++ G D+F +N+L+ YC +++FDE + RD
Sbjct: 121 KACGCAPGCRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGVSRD 180
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC--EEAIQLFCNM 234
+VS N+++ GYV G++ A++LFD MP RDA SWG L+ GY + + A +LF M
Sbjct: 181 LVSWNSMVAGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRARELFDQM 240
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ D+ N ++D YA+ G +
Sbjct: 241 TERDLVCWN---------------------------------------SMIDGYARHGRM 261
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+ A +FE E+N+ +W+ ++ G G + +L +F M+ I+PD V +GA+ C
Sbjct: 262 DEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSAC 321
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ G +++ R L +E +S + + D+ + G ++ A+ + + MP V
Sbjct: 322 AQLGALEQGRWLHSYLEKKKVLSDVVVQTA-LIDMYMKCGRMDLAMLIFESMPE-RSVVT 379
Query: 415 WSGLLGGCRIHG 426
W+ ++ G HG
Sbjct: 380 WNVMIVGLGTHG 391
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 115/290 (39%), Gaps = 33/290 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A S+F +P + S++ +I H A+ F M I PD + + A
Sbjct: 261 MDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSA 320
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL + + +HS + K + DV V +L+ +Y R+ A +F+ + R VV+
Sbjct: 321 CAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVVTW 380
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I V GT GY +A+ LF M +
Sbjct: 381 NVMI------------------------VGLGT--HGYGL-----DAVMLFHRMEAERVA 409
Query: 241 PDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
D+++L++ L+AC G + +G I HR + I LVD + G ++ A
Sbjct: 410 VDDLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARH 469
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
E+ E W ++L H L+ + R+ GV +L
Sbjct: 470 AIETMPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVL 519
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 246/433 (56%), Gaps = 7/433 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A F+ + + S+N++I + A+ +F M + PD + ++ AC+
Sbjct: 205 AQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACAS 264
Query: 124 LCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ IH++V+K + D+ + N+L+ +Y R+ +A+ +FD + R+VVS +
Sbjct: 265 WSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETS 324
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY +A + AR +F M ++ VSW L+AGY Q+ + EEA++LF + I P
Sbjct: 325 MVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT 384
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQI------RVDSFLSTGLVDFYAKCGYINT 296
+ + L+ACA L +L+ G+ H I + D F+ L+D Y KCG +
Sbjct: 385 HYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVED 444
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+FE E+++ +WNAM+VG A +G G +L F +M+ + KPD VT++G L CSH
Sbjct: 445 GCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSH 504
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGLV+E R+ F M + G++ H+ CM DLLGRAG ++EA ++I+ MPM D VW
Sbjct: 505 AGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWG 564
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C++HGN+E+ + AE +M++ P + G Y +L+++YA RW+DVV++R+ +
Sbjct: 565 SLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRG 624
Query: 477 IKKNAGCSLIQLN 489
+ K GCS I++
Sbjct: 625 VIKQPGCSWIEIQ 637
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D F LL +C + S A+ IH++++K F ++F+ N L+ Y DA+++F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
D + R+ S N ++ K G L A +F MP D SW +V+G+AQ D+ EEA++
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
F +M D + + SALSACA L +L G IH I ++ +D ++ + LVD Y+
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG + A F+ +N+ +WN+++ +G +L F M++ ++PD +T+
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
+ C+ + E ++ + +L + D+ + + EA + +MP+
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 144/308 (46%), Gaps = 36/308 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A ++F ++P P S+N ++ A+ F M + + YSF L A
Sbjct: 101 LDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSA 160
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L ++ IH+ + K ++ DV++ ++L+ +Y + AQ FD + R++VS
Sbjct: 161 CAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSW 220
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI Y + G AG +A+++F MMD ++
Sbjct: 221 NSLITCYEQNGP-----------------------AG--------KALEVFVMMMDNGVE 249
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD I L S +SACA + +G IH R ++ ++ R D L LVD YAKC +N A
Sbjct: 250 PDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARL 309
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ +N+ + +M+ G A + + + FS M+E + V+ + G + G
Sbjct: 310 VFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNV----VSWNALIAGYTQNGE 365
Query: 360 VDEARKLF 367
+EA +LF
Sbjct: 366 NEEAVRLF 373
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 270/556 (48%), Gaps = 83/556 (14%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I +C ++ QIHAH LT L+ + L A K I+ P +
Sbjct: 14 DLIHKCNDLRSFKQIHAHLLTSALV----TNDLVVTKAANFLGKHITDVHYPCNFLKQFD 69
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
S+ S+F N +I + P A++++ PD Y+FP +L++C++
Sbjct: 70 WSL-------SSFPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKF 122
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ HS +K G CD++V N+L+HVY + A ++F+++L RDVVS LI
Sbjct: 123 SGIGEVRQFHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLI 182
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA---------------------------- 216
GYVK G A LF RM V GT V+
Sbjct: 183 SGYVKTGLFNEAISLFLRMNVEPNV--GTFVSILGACGKLGRLNLGKGIHGLVFKCLYGE 240
Query: 217 ----------GYAQSDQCEEAIQLFCNMMDLDI--------------------------- 239
Y + D +A ++F M + DI
Sbjct: 241 ELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQ 300
Query: 240 ----KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+PD + L S LSACA LG L+ G+ +H YI+ ++I+ D + T LVD YAKCG I+
Sbjct: 301 ASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCID 360
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A IF KN+ TWNA + GLA++G G+ +L F ++E+ +P+ VT L C
Sbjct: 361 MAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACC 420
Query: 356 HAGLVDEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
H GLVDE RK F+EM S +Y +S L+HYGCM DLL RAGL+ EA+E+IK MPM DV +
Sbjct: 421 HNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQI 480
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
LL +GNV + + + ++ +D G+Y +L+++YA +W +V +RR +
Sbjct: 481 LGALLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQ 540
Query: 475 GKIKKNAGCSLIQLNG 490
I K G S+I+++G
Sbjct: 541 KGISKAPGSSIIRVDG 556
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 236/432 (54%), Gaps = 31/432 (7%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
D AL +F++IP + S+ II + A+ F ++ + + PD +S +L
Sbjct: 163 DNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVL 222
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC++L + + I + G +VFV SL+
Sbjct: 223 AACARLGDCTSGEWIDRYISDSGMGRNVFVATSLL------------------------- 257
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
D YVK G+L A +F MP +D VSW T++ GYA + ++A+ LF M +
Sbjct: 258 ------DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN 311
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KPD +V LSACA LG L+ G ++ N+ + L T L+D Y+KCG + A
Sbjct: 312 LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAW 371
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
EIF + ++K+ WNAM+VGL+M+G + FS + + I+PD T +G L GC+H G
Sbjct: 372 EIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGG 431
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
V+E R+ F+ M+ V+ ++ ++HYGCM DLLGRAGL+ EA ++I MPM + VW L
Sbjct: 432 FVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGAL 491
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LGGC++H + +AE + +++L+P + G Y L+++Y+ RWE+ KIR ++ +I+
Sbjct: 492 LGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQ 551
Query: 479 KNAGCSLIQLNG 490
K CS I+++G
Sbjct: 552 KIRACSWIEIDG 563
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 189/375 (50%), Gaps = 47/375 (12%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+Y+ +F+ + P+ F +NT+IR +A+ L+ MR P+ ++ PF+L+AC
Sbjct: 65 NYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKAC 124
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
++ L IHS ++K G+ DVFV SL+ +Y V C+
Sbjct: 125 ARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLY---------------------VKCD 163
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
D A ++FD +P ++ VSW ++ GY S EAI F ++++ +KP
Sbjct: 164 NFDD----------ALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D+ +LV L+ACARLG+ G+ I RYI + + + F++T L+D Y KCG + A IF
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ EK++ +W+ M+ G A +GL + +L F +M +KPD T++G L C+ G +D
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333
Query: 362 ---EARKLFDEME----SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
A L D E V G + + D+ + G + +A E+ M D V
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTA--------LIDMYSKCGSVTQAWEIFTAMKK-KDRVV 384
Query: 415 WSGLLGGCRIHGNVE 429
W+ ++ G ++G+ +
Sbjct: 385 WNAMMVGLSMNGHAK 399
>gi|297745510|emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 234/432 (54%), Gaps = 45/432 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA +F+ IP P+ F YN +I+A++ L++QM P+ +SF FL A
Sbjct: 32 IPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSA 91
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L SH + +H+ +K GF CDVF L +L+ +Y L A++ FDE+ RDV +
Sbjct: 92 CASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTW 151
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
N++I GY + GDL A +LF MP R+ SW +++GYAQ+ Q +A+ +F M + ++
Sbjct: 152 NSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEM 211
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ + L S L ACA LG LE G+ I Y N + ++S L++ YA+CG I+ A
Sbjct: 212 RPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWG 271
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE +NL +WN+M++GLA+HG ++ F +M+ PD VT +G L+ C+H G
Sbjct: 272 VFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGG 331
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V E + F+ ME + ++ +L+HYGCM DLLG L E
Sbjct: 332 MVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGPGALFE--------------------- 370
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L+P + G Y +L+++YA A RW+ V ++R+ + GKI
Sbjct: 371 ----------------------LEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKIT 408
Query: 479 KNAGCSLIQLNG 490
K AG S I+ G
Sbjct: 409 KAAGYSFIEEGG 420
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 41/285 (14%)
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LI ++ + +A +LFD +P + L+ Y+ + L+ M P+
Sbjct: 22 LIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPN 81
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK------------ 290
+ SACA L +QG+ +H + + D F T LVD YAK
Sbjct: 82 EHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFD 141
Query: 291 -------------------CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
CG + A+E+F +N+ +W AM+ G A +G +L
Sbjct: 142 EMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSM 201
Query: 332 FSRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY----GVSKELKHYGCM 386
F M E ++P+ VT+ L C++ G ++ ++ VY G K L +
Sbjct: 202 FLMMEEETEMRPNEVTLASVLPACANLGALEVGERI-----EVYARGNGYFKNLYVSNAL 256
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
++ R G I++A + +++ ++ W+ ++ G +HG + A
Sbjct: 257 LEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEA 301
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 219/394 (55%), Gaps = 33/394 (8%)
Query: 98 LFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC 157
+S M + P SF +LR+C+ L + H Q++K+GF D+ + L+
Sbjct: 17 FYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLL---- 72
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA--VSWGTLV 215
D Y K G + AR LFD M R++ V+W T++
Sbjct: 73 ---------------------------DFYAKHGYVEEARNLFDNMTERNSNSVTWNTMI 105
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
+ Y Q + AI +F M ++KP + +VS LSACA LG L+ G+ IH YI +++
Sbjct: 106 SAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLK 165
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+D L L+D Y KCG + AI++F KN+F WN+++VGL M+G G ++ F M
Sbjct: 166 IDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVM 225
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
+ IKPDGVT +G L GCSH+GL+ ++ F EM VYG+ ++HYGCM DLLGRAG
Sbjct: 226 EKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGY 285
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
++EALE+I+ MPM + V LL C+IH + ++ E + +++L P DGG Y L+++
Sbjct: 286 LKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNL 345
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
YA+ RW+DV R+ + + K GCS I++N
Sbjct: 346 YASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVN 379
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 12/221 (5%)
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
+S C + + + M+ D+ P + L +CA GE + G+ H I D
Sbjct: 7 ESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMI 66
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
L TGL+DFYAK GY+ A +F++ E+ N TWN M+ G ++ F +M
Sbjct: 67 LQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQS 126
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK----HYGCMADLLGRA 393
+KP VT++ L C+H G +D E Y +K LK + D+ +
Sbjct: 127 ENVKPTEVTMVSLLSACAHLGALD-----MGEWIHGYIRTKRLKIDVVLGNALIDMYCKC 181
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAA 434
G +E A+++ + ++F W+ ++ G ++G E A AA
Sbjct: 182 GALEAAIDVFHGLSR-KNIFCWNSIIVGLGMNGRGEEAIAA 221
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 48/263 (18%)
Query: 64 ALSIFNNIPY--PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A ++F+N+ ++ ++NT+I A+ A+ +F QM++ ++ P + LL AC
Sbjct: 84 ARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSAC 143
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L + + + IH + DV + N+L+ +YC
Sbjct: 144 AHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYC------------------------ 179
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
K G L A +F + ++ W +++ G + + EEAI F M IKP
Sbjct: 180 -------KCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKP 232
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYIN 295
D + V LS C+ G L G+ RY +++ L G +VD + GY+
Sbjct: 233 DGVTFVGILSGCSHSGLLSAGQ---RY--FSEMLGVYGLEPGVEHYGCMVDLLGRAGYLK 287
Query: 296 TAIEIFESSQEKNLFTWNAMLVG 318
A+E+ + K N+M++G
Sbjct: 288 EALELIRAMPMKP----NSMVLG 306
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 235/428 (54%), Gaps = 9/428 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A S+F+ +P S+N +I + A LF ++ D +++ ++
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPI----RDVFAWTAMVSG 286
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
Q A I ++ + + N+++ Y ++ A+ELFD++ R+ S
Sbjct: 287 FVQNGMLDEATRIFEEMPEKNEVS----WNAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT++ GY + G++ A+ LFD MP RD +SW +++GYAQS Q EEA+ LF M
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ AL ALS+CA + LE GK +H + + L+ Y KCG I A ++
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE EK++ +WN M+ G A HG G+ +L F M + IKPD VT++G L CSH G V
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFV 521
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F+ M YG++ KHY CM DLLGRAG ++EAL ++K MP D W LLG
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
RIHG+ E+ E AAE V +++P++ G+Y +L+++YA + RW +V ++R + +KK
Sbjct: 582 ASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKV 641
Query: 481 AGCSLIQL 488
G S +++
Sbjct: 642 PGYSWVEI 649
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 190/431 (44%), Gaps = 54/431 (12%)
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
+ + A +F +P S+N ++ + + A LF+QM D S+
Sbjct: 103 SNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNA 158
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L +Q A+ I Q+L + + N L+ Y R+ DA+ LFD + +
Sbjct: 159 MLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE 214
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
+VS N L+ GYV+ L AR LFDRMP RD +SW ++ GYAQ+ EA +LF +
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF---EE 271
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHR----------------YIELNQI------ 274
L I+ D A + +S + G L++ I Y++ QI
Sbjct: 272 LPIR-DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKAREL 330
Query: 275 ------RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
R S +T +V YA+CG I+ A +F+ +++ +W AM+ G A G +
Sbjct: 331 FDQMPSRNTSSWNT-MVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEA 389
Query: 329 LVYFSRMIEARIKPDG-----VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
L F +M K DG + AL C+ ++ ++L + G
Sbjct: 390 LHLFIKM-----KRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIAG 443
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV-MKLK 442
+ + G+ G IEEA ++ + + D+ W+ ++ G HG + A A E + M +K
Sbjct: 444 NALLAMYGKCGSIEEAFDVFEDITE-KDIVSWNTMIAGYARHGFGKEALALFESMKMTIK 502
Query: 443 PEDGGVYKVLA 453
P+D + VL+
Sbjct: 503 PDDVTLVGVLS 513
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 156/326 (47%), Gaps = 45/326 (13%)
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
N+++ Y ++ A+++F+++ RD++S N ++ GYVK G+L+ AR LF++MP +D V
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH--- 266
SW +++G+AQ+ EEA ++F M+ + I+ LSA + G +E + +
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARRLFDSK 210
Query: 267 ----------------RYIELNQIRV--------DSFLSTGLVDFYAKCGYINTAIEIFE 302
R L+ R D ++ YA+ G ++ A +FE
Sbjct: 211 MDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFE 270
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+++F W AM+ G +G+ L +R+ E + + V+ + G + +++
Sbjct: 271 ELPIRDVFAWTAMVSGFVQNGM----LDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
AR+LFD+M S+ + M + G I++A + +MP D W+ ++ G
Sbjct: 327 ARELFDQMP-----SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQ-RDCISWAAMISGY 380
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGV 448
G +E A +K+K DGG+
Sbjct: 381 AQSGQ---SEEALHLFIKMK-RDGGI 402
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 24/280 (8%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+ N + Y + A +F+ + R V+ N +I GY+ AR++F++MP
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMP 118
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RD +SW +++GY ++ A LF M + D+ ++ + LS A+ G +E+ +
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV----VSWNAMLSGFAQNGFVEEARK 174
Query: 265 IHRYIELNQIRVDSFLS-TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
I +Q+ V + +S GL+ Y + G I A +F+S + + +WN ++ G
Sbjct: 175 I-----FDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKK 229
Query: 324 LGRLSLVYFSRMIEARIKP--DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
+ F RM P D ++ + G + GL+ EAR+LF+E+ +++
Sbjct: 230 RLDDARSLFDRM------PVRDKISWNIMITGYAQNGLLSEARRLFEELP-----IRDVF 278
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ M + G+++EA + ++MP +V W+ ++ G
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEV-SWNAMIAG 317
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 284/561 (50%), Gaps = 101/561 (18%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGL--------LFLSPCHILTTILYAITTFKPISSA 53
++ +K CK + + Q+HA + +GL LF+S H L + L
Sbjct: 31 SITTLLKACKKREHLEQVHACIIHRGLEQDHFLVFLFISRAHTLLSTL------------ 78
Query: 54 SSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAH---TLFSSPLNAVVLFSQMRTVSIPPD 110
SYA S+F+ + PST +NT+I++H LFS L+A F++M+ PD
Sbjct: 79 --------SYASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSA---FARMKAHGALPD 127
Query: 111 FYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY--C--------VFH 160
+++P +++ACS C +++H + G D++V SL+ +Y C VF
Sbjct: 128 SFTYPSVIKACSGTCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFD 187
Query: 161 RLRD---------------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
+ D A++LFDE+ +R+V S N+++ G+VK GDL+ AR +
Sbjct: 188 GMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGV 247
Query: 200 FDRMPFR-------------------------------DAVSWGTLVAGYAQSDQCEEAI 228
FD MP + D V+W L++GY Q+ +A+
Sbjct: 248 FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQAL 307
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD---SFLSTGLV 285
++F M +++KPD LVS +SA A+LG LE + + Y+ ++I +D + L+
Sbjct: 308 RVFLEMELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYV--SKICIDLQQDHVIAALL 365
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
D AKCG + A+++F+ +++ + +M+ GL++HG G ++ F+RM+ + PD V
Sbjct: 366 DMNAKCGNMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEV 425
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
L CS AGLVDE R F M+ Y +S HY CM DLL R+G I +A E+IK
Sbjct: 426 AFTVILTACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKL 485
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
+P W LLG C+++G+ E+ E A + +L+P + Y +L+D+YA A+RW DV
Sbjct: 486 IPWEPHAGAWGALLGACKLYGDSELGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDV 545
Query: 466 VKIRRSLDAGKIKKNAGCSLI 486
+R + +++K G S I
Sbjct: 546 SLVRSKMRERRVRKIPGSSKI 566
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 173/503 (34%), Positives = 266/503 (52%), Gaps = 55/503 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSA-----SSPTTDPLSY 63
+ K K+ QIH H L G ++ T+++ + A SP D +SY
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDL--DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 64 ---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
A +F+ IP S+N +I + + A+ LF M ++
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD + ++ AC+Q S L + +H + GF ++ ++N+L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL---------------- 307
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
ID Y K G+L A LF+R+P++D +SW TL+ GY + +EA+
Sbjct: 308 ---------------IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVD 286
LF M+ P+++ ++S L ACA LG ++ G+ IH YI+ L + S L T L+D
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAKCG I A ++F S K+L +WNAM+ G AMHG S FSRM + I+PD +T
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L CSH+G++D R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
M D +W LL C++HGNVE+ E+ AE+++K++PE+ G Y +L+++YA+A RW +V
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 467 KIRRSLDAGKIKKNAGCSLIQLN 489
K R L+ +KK GCS I+++
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEID 615
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 238/426 (55%), Gaps = 12/426 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CKT++ + IHA + GL H L + F +S P + L YA
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGL------HNTNYALSKLIEFCILS----PHFEGLPYA 87
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+F I P+ +NT+ R H L S P++A+ L+ M ++ + P+ Y+FPF+L++C++
Sbjct: 88 ISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKS 147
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q IH VLKLG D++V SL+ +Y RL DA ++FD+ +RDVVS LI
Sbjct: 148 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY G + +A++LFD +P +D VSW +++GYA++ +EA++LF +MM +++PD
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ +SACA+ G +E G+ +H +I+ + + + L+D Y+KCG + TA +FE
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
K++ +WN ++ G L + +L+ F M+ + P+ VT+L L C+H G +D R
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Query: 365 KLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ ++ + GV+ + D+ + G IE A ++ + + + W+ ++ G
Sbjct: 388 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFA 446
Query: 424 IHGNVE 429
+HG +
Sbjct: 447 MHGRAD 452
>gi|215741011|dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 248/451 (54%), Gaps = 62/451 (13%)
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC---- 157
MR ++ PD Y+FP +L+AC + +H + ++ G D+F N+L+ YC
Sbjct: 1 MRRAAVAPDAYTFPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGD 60
Query: 158 ------VF-HRLRD-------------------AQELFDEILYRDVVSCNTLIDGYVK-A 190
VF H +RD AQ+LFDE+ RD S T+IDGY + A
Sbjct: 61 CRSGRKVFDHGVRDLVSWNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMA 120
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA----------------------- 227
G + AR+LFD+MP RD V W +++ GYA+ + +EA
Sbjct: 121 GGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYV 180
Query: 228 --------IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
++ F M+ IKPD +A V A++ACA+LG LEQG+ +H Y+E ++ D
Sbjct: 181 RFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVV 240
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
+ T L+D Y KCG ++ A IFES +K++ TWN M+VGL HG G ++ F++M R
Sbjct: 241 VQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETER 300
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
D ++IL L C+HAGLV E +F ME G+ +++HYG + DLLGRAG +++A
Sbjct: 301 APMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQA 360
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANA 459
I+ MPM +W LL CR H VE+AE + E + L +D GVY +L+++YA+
Sbjct: 361 RNTIETMPMEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADE 420
Query: 460 DRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
W+DV +IR+ + A +KKN G S+I+++G
Sbjct: 421 GMWDDVFRIRKLMSAEGMKKNIGRSVIEVDG 451
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F +P + S++ +I + F P A+ F +M I PD + + A
Sbjct: 154 MDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAA 213
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL + + +HS + K + DV V +L+ +Y RL A+ +F+ + + VV+
Sbjct: 214 CAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTW 273
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I V GT GY +AI+LF N M+ +
Sbjct: 274 NVMI------------------------VGLGT--HGYGL-----DAIKLF-NQMETERA 301
Query: 241 P-DNIALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINT 296
P D++++++ L++C G + +G I +E + + +V+ + L+D + G ++
Sbjct: 302 PMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHY--GALIDLLGRAGRVDQ 359
Query: 297 AIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
A E+ E W ++L H L+ + R+ GV +L
Sbjct: 360 ARNTIETMPMEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVL 412
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 238/432 (55%), Gaps = 31/432 (7%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
D AL +F++IP + S+ II + A+ F ++ + + PD +S +L
Sbjct: 163 DNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVL 222
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC++L + + I D ++ +S M R+V
Sbjct: 223 AACARLGDCTSGEWI-----------DRYISDSGMG--------------------RNVF 251
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+L+D YVK G+L A +F MP +D VSW T++ GYA + ++A+ LF M +
Sbjct: 252 VATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN 311
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KPD +V LSACA LG L+ G ++ N+ + L T L+D Y+KCG + A
Sbjct: 312 LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAW 371
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
EIF + + K+ WNAM+VGL+M+G + FS + + I+PD T +G L GC+H G
Sbjct: 372 EIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGG 431
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
V+E R+ F+ M+ V+ ++ ++HYGCM DLLGRAGL+ EA ++I MPM + VW L
Sbjct: 432 FVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGAL 491
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LGGC++H + +AE + +++L+P + G Y L+++Y+ RWE+ KIR ++ +I+
Sbjct: 492 LGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQ 551
Query: 479 KNAGCSLIQLNG 490
K CS I+++G
Sbjct: 552 KIRACSWIEIDG 563
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 189/375 (50%), Gaps = 47/375 (12%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+Y+ +F+ + P+ F +NT+IR +A+ L+ MR P+ ++ PF+L+AC
Sbjct: 65 NYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKAC 124
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
++ L IHS ++K G+ DVFV SL+ +Y V C+
Sbjct: 125 ARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLY---------------------VKCD 163
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
D A ++FD +P ++ VSW ++ GY S EAI F ++++ +KP
Sbjct: 164 NFDD----------ALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D+ +LV L+ACARLG+ G+ I RYI + + + F++T L+D Y KCG + A IF
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ EK++ +W+ M+ G A +GL + +L F +M +KPD T++G L C+ G +D
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333
Query: 362 ---EARKLFDEME----SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
A L D E V G + + D+ + G + +A E+ M D V
Sbjct: 334 LGIWASSLMDRNEFLSNPVLGTA--------LIDMYSKCGSVTQAWEIFTAMKR-KDRVV 384
Query: 415 WSGLLGGCRIHGNVE 429
W+ ++ G ++G+ +
Sbjct: 385 WNAMMVGLSMNGHAK 399
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 260/487 (53%), Gaps = 44/487 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I +C +++++ QI A+ + T+L + F S+PT + +A
Sbjct: 40 SLIPKCTSLRELKQIQAYTIKTH-------QNNPTVLTKLINF----CTSNPTIASMDHA 88
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ IP P +NT+ R + F PL A++L SQ+ + PD Y+F LL+AC++L
Sbjct: 89 HRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARL 148
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H +KLG +++V C TLI
Sbjct: 149 KALEEGKQLHCLAVKLGVGDNMYV-------------------------------CPTLI 177
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
+ Y D+ AR++FD++ V++ ++ A++ + EA+ LF + + +KP ++
Sbjct: 178 NMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDV 237
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
++ ALS+CA LG L+ G+ IH Y++ N ++T L+D YAKCG ++ A+ +F+
Sbjct: 238 TMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDM 297
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++ W+AM+V A HG G ++ M +A+++PD +T LG L CSH GLV+E
Sbjct: 298 PRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGY 357
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F M YG+ +KHYGCM DLLGRAG +EEA + I ++P+ +W LL C
Sbjct: 358 EYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSS 417
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL-DAGKIKKNAGC 483
HGNVE+A+ + + +L GG Y +L+++ A RW+DV +R+ + D G +K GC
Sbjct: 418 HGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKV-PGC 476
Query: 484 SLIQLNG 490
S I++N
Sbjct: 477 SSIEVNN 483
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 237/430 (55%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +FN + + S+ +I + LF +M+ +I P+ + L+
Sbjct: 248 LGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVE 307
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + L + +H+ +L+ GF + + +L
Sbjct: 308 CGFTGALQLGKQLHAYILRNGFSVSLALATAL---------------------------- 339
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+D Y K D+ +AR LFD RD + W +++ YAQ++ ++A LF M ++
Sbjct: 340 ---VDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVR 396
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P + +VS LS CA G L+ GK +H YI+ ++ VD L+T LVD YAKCG IN A +
Sbjct: 397 PTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRL 456
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + +++ WNA++ G AMHG G +L F+ M +KP+ +T +G L CSHAGLV
Sbjct: 457 FIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLV 516
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
E +KLF++M +G+ +++HYGCM DLLGRAGL++EA EMIK MP+ + VW L+
Sbjct: 517 TEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVA 576
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+H N ++ E AA +++++PE+ G +++++YA A+RW D +R+++ +KK
Sbjct: 577 ACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE 636
Query: 481 AGCSLIQLNG 490
G S+I++NG
Sbjct: 637 PGHSVIEVNG 646
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 169/376 (44%), Gaps = 41/376 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA +F+ + S++T+IR+ + A+ L +M + + P + ++
Sbjct: 145 VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL 204
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ + + + +H+ V++ NS + V +
Sbjct: 205 FADTANMRMGKAMHAYVIR----------NSNNE-------------------HMGVPTT 235
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D Y K G L ARQLF+ + + VSW ++AG +S++ EE +LF M + +I
Sbjct: 236 TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIF 295
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ I ++S + C G L+ GK +H YI N V L+T LVD Y KC I A +
Sbjct: 296 PNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARAL 355
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+S+Q +++ W AML A + F +M + ++P VTI+ L C+ AG +
Sbjct: 356 FDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGAL 415
Query: 361 DEARKLFDEMESVYGVSKELKHYGC-----MADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
D + + + KE C + D+ + G I A + + + D+ +W
Sbjct: 416 DLGKWVHSY------IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMW 468
Query: 416 SGLLGGCRIHGNVEIA 431
+ ++ G +HG E A
Sbjct: 469 NAIITGFAMHGYGEEA 484
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 35/307 (11%)
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
P +L+AC Q+ L + IH VLK G DVFV N+LM +Y
Sbjct: 98 PSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMY------------------ 139
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
+C + +AR +FD+M RD VSW T++ +++ + + A++L M
Sbjct: 140 -GECAC------------VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 186
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYI--ELNQIRVDSFLSTGLVDFYAKCG 292
+ ++P +A+VS ++ A + GK +H Y+ N + +T L+D YAKCG
Sbjct: 187 NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCG 246
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
++ A ++F +K + +W AM+ G F RM E I P+ +T+L +V
Sbjct: 247 HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIV 306
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C G + ++L + G S L + D+ G+ I A + DV
Sbjct: 307 ECGFTGALQLGKQLHAYILR-NGFSVSLALATALVDMYGKCSDIRNARALFDS-TQNRDV 364
Query: 413 FVWSGLL 419
+W+ +L
Sbjct: 365 MIWTAML 371
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
N S L AC ++ + GK IH ++ + D F+ L+ Y +C + A +F+
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
E+++ +W+ M+ L+ + ++L M +++P V ++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMV 199
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 246/432 (56%), Gaps = 7/432 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P + S+N++I + A+ LF +M PD + ++ AC+
Sbjct: 201 AQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAG 260
Query: 124 LCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + + +H++++K F D+ + N+L+ +Y R +A+ +FD + R VVS +
Sbjct: 261 LAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETS 320
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I GY K+ ++ A+ +F +M ++ V+W L+A YA + + EEA++LF + + P
Sbjct: 321 MITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPT 380
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDS------FLSTGLVDFYAKCGYINT 296
+ + L+ACA L L+ G+ H ++ R DS F+ LVD Y K G I+
Sbjct: 381 HYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISD 440
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
++FE ++ +WNAM+VG A +G + +L+ F RM+ + +PD VT++G L C H
Sbjct: 441 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGH 500
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLV E R+ F M +G+ HY CM DLLGRAG ++E E+I+ MPM D +W+
Sbjct: 501 SGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWA 560
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG CR+H N+++ E AA + +L P++ G Y +L+++YA +W DV ++RRS+
Sbjct: 561 SLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRG 620
Query: 477 IKKNAGCSLIQL 488
+ K GCS I++
Sbjct: 621 VSKQPGCSWIEI 632
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 151/327 (46%), Gaps = 4/327 (1%)
Query: 142 FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFD 201
F + F+LN+L+ Y L DA+ +FD + +R+ S N L+ + G A LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQ 261
+P D S+ +VA AQ + +A++ M D + + SALSACA
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 262 GKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
G+ +H + + D ++ T LVD YAKC A ++F++ E+N+ +WN+++
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQ 225
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
+G +L F RM++ PD VT+ + C+ E R++ M +++
Sbjct: 226 NGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV 285
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL 441
+ D+ + G EA + +M + V + ++ G NV A+A +++
Sbjct: 286 LNNALVDMYAKCGRTWEAKCVFDRMAIRS-VVSETSMITGYAKSANVGDAQAV---FLQM 341
Query: 442 KPEDGGVYKVLADVYANADRWEDVVKI 468
++ + VL YA+ E+ +++
Sbjct: 342 VEKNVVAWNVLIATYAHNSEEEEALRL 368
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 38/314 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL++F IP P SYN ++ A +A+ + M + YSF L AC+
Sbjct: 100 ALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACAS 159
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + +H+ V K DV++ +L+ +Y R +AQ++FD + R++VS N+L
Sbjct: 160 EKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSL 219
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I Y + G + +EA+ LF MM PD
Sbjct: 220 ITCYEQNGPV-------------------------------DEALALFVRMMKDGFVPDE 248
Query: 244 IALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ L S +SACA L +G+ +H R ++ ++ R D L+ LVD YAKCG A +F+
Sbjct: 249 VTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFD 308
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+++ + +M+ G A + F +M+E + V I +H +E
Sbjct: 309 RMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLI----ATYAHNSEEEE 364
Query: 363 ARKLFDEM--ESVY 374
A +LF + ESV+
Sbjct: 365 ALRLFVRLKRESVW 378
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 263/471 (55%), Gaps = 23/471 (4%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP-YPST 76
Q+HA + +GLL ++ T+L F+ S +F++
Sbjct: 100 QVHAQAVRRGLLV--DVFVVNTLLAMYAAFRDTRSMRE-----------VFDSCAGVADL 146
Query: 77 FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQ 136
++NT++ + A +F QM + S+ ++ A + +A+ + +
Sbjct: 147 VTWNTMLGGYVKCGEIGEARRVFEQMPQ----RNGVSWSAMVGAYAGAGELDVAREMFDE 202
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
+ +G +V NS++ + L A+++FDE+ R++VS NT++ GY G++ A
Sbjct: 203 MPAIGR--NVVSWNSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMNDA 260
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIALVSALSACAR 255
R+LFDRMP +D VSW +++GYAQ+ E ++LF M + ++ P+ + +VS LSACA
Sbjct: 261 RELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACAH 320
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
L LE+G+ H +I+ +++ +DS + G L+D Y+KCG + A++IF S +KN+ WN
Sbjct: 321 LTALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSLDQKNVSAWN 380
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
A++ GLA++G R S+ F +M + KP+G+T +G L C+H GLVDE R+ F M S
Sbjct: 381 ALITGLAVNGDVRSSIDVFEQMRRSGEKPNGITFVGVLTACAHGGLVDEGRRCFQSMAST 440
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
GV E KHYGCM D+LGRAGL+EEA E+I+ MPM DV + LLG CR+H V++A
Sbjct: 441 CGVQPEAKHYGCMVDMLGRAGLLEEAEELIRSMPMVPDVMILGALLGACRMHKRVDVAAR 500
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
++ L + G + +++D+YA A +W D + R L I K G S
Sbjct: 501 VQNEILGLSTQQSGCHVLISDIYAAAGKWADALYARGVLQKFGISKLRGSS 551
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 200/400 (50%), Gaps = 20/400 (5%)
Query: 56 PTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFP 115
P T S +F P TF +N +IRA SP A FS + PD ++FP
Sbjct: 26 PRTSAASLYFPLF---PSSCTFLHNLLIRASATSPSPRLAFAAFSSILRSGDTPDRFTFP 82
Query: 116 FLLRACSQLCSHS-LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL- 173
LL++ S+L S +H+Q ++ G + DVFV+N+L+ +Y F R +E+FD
Sbjct: 83 SLLKSASRLASFPRTGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAG 142
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
D+V+ NT++ GYVK G++ AR++F++MP R+ VSW +V YA + + + A ++F
Sbjct: 143 VADLVTWNTMLGGYVKCGEIGEARRVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMFDE 202
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS-TGLVDFYAKCG 292
M I + ++ S ++ AR G L + + +++ V + +S +V YA G
Sbjct: 203 M--PAIGRNVVSWNSMITGFARHGLLPLARKM-----FDEMPVRNLVSWNTMVRGYAVNG 255
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGAL 351
+N A E+F+ EK++ +W M+ G A +L F M E+ + P+ VT++ L
Sbjct: 256 EMNDARELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVL 315
Query: 352 VGCSHAGLVDEAR---KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
C+H ++E R D+ + V + E + D+ + G + A+++ +
Sbjct: 316 SACAHLTALEEGRWAHAFIDKHKMV--LDSEFNLGAALIDMYSKCGRTDLAVKIFHSLDQ 373
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
+V W+ L+ G ++G+V + E + + + G+
Sbjct: 374 -KNVSAWNALITGLAVNGDVRSSIDVFEQMRRSGEKPNGI 412
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 258/485 (53%), Gaps = 41/485 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + +C +++++ Q+ A + L H ++L F + +PTT + +A
Sbjct: 25 SLLPKCTSLRELKQLQAFAIKTHL------HSDLSVLTKFINF----CSLNPTTTSMQHA 74
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ IP P +NT+ R + +PL A LF+Q+ + PD Y+FP LL+AC+
Sbjct: 75 HHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASC 134
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H +KLG +V+V +L+++Y + + A+ +FD+I VV+ N +I
Sbjct: 135 KALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMI 194
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
G YA+ + EA+ LF + ++KP ++
Sbjct: 195 TG-------------------------------YARGSRPNEALSLFRELQARNLKPTDV 223
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
++S LS+CA LG L+ GK +H Y++ N + T L+D YAKCG ++ A+ +FE+
Sbjct: 224 TMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENM 283
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++ W+AM++ A+HG G ++ F M +A +PD +T LG L CSH GLV+E
Sbjct: 284 AVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGF 343
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F M YGV +KHYGCM DLLGRAG +EEA E I +P+ +W LL C
Sbjct: 344 EYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGS 403
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGNVE+ + E + +L GG Y +L+++ A A RWEDV +R+ ++ + K GCS
Sbjct: 404 HGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCS 463
Query: 485 LIQLN 489
+++N
Sbjct: 464 SVEVN 468
>gi|356502573|ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 503
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 259/484 (53%), Gaps = 51/484 (10%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA--ITTFKPISSASSPTTDPLSYALSI 67
CKT + + HA + +G H + A I + S+ L +A +
Sbjct: 30 CKTTDNVKKAHAQVVVRG-------HEQDPFIAARLIDKYSHFSN--------LDHARKV 74
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F+N+ P F N +I+ + A+ ++ MR I P++Y++PF+L+AC +
Sbjct: 75 FDNLSEPDVFCCNVVIKVYANADPFGEALKVYDAMRWRGITPNYYTYPFVLKACGAEGAS 134
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+ IH +K G D+FV N+L+ Y
Sbjct: 135 KKGRVIHGHAVKCGMDLDLFVGNALVAFY------------------------------- 163
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIK-PDNIA 245
K D+ +R++FD +P RD VSW ++++GY + ++AI LF +M+ D + PD+
Sbjct: 164 AKCQDVEVSRKVFDEIPHRDIVSWNSMISGYTVNGYVDDAILLFYDMLRDESVGGPDHAT 223
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
V+ L A A+ ++ G IH YI ++ +DS + TGL+ Y+ CGY+ A IF+
Sbjct: 224 FVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGTGLISLYSNCGYVRMARAIFDRIS 283
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++++ W+A++ HGL + +L F +++ A ++PDGV L L CSHAGL+++
Sbjct: 284 DRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGVVFLCLLSACSHAGLLEQGWH 343
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LF+ ME+ YGV+K HY C+ DLLGRAG +E+A+E I+ MP+ ++ LLG CRIH
Sbjct: 344 LFNAMET-YGVAKSEAHYACIVDLLGRAGDLEKAVEFIQSMPIQPGKNIYGALLGACRIH 402
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+E+AE AAE + L P++ G Y +LA +Y +A+RW+D ++R+ + +IKK G S
Sbjct: 403 KNMELAELAAEKLFVLDPDNAGRYVILAQMYEDAERWQDAARVRKVVKDKEIKKPIGYSS 462
Query: 486 IQLN 489
++L
Sbjct: 463 VELE 466
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 258/516 (50%), Gaps = 60/516 (11%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSA----- 53
T + K C K H Q+HAH L K L L P H+ T++++ + + A
Sbjct: 129 TFPSLFKSCAKSKATHEAKQLHAHAL-KLALHLHP-HVHTSLIHMYSQVGELRHARLVFD 186
Query: 54 SSPTTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVL 98
S D +S+ A +F+ IP S+N +I + A+
Sbjct: 187 KSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALAC 246
Query: 99 FSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV 158
F++M+ + P+ + +L AC L S L + I S V GF
Sbjct: 247 FTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGF---------------- 290
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
+++ N L+D Y K G++ AR+LFD M +D + W T++ GY
Sbjct: 291 ---------------GKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGY 335
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
EEA+ LF M+ ++ P+++ ++ L ACA LG L+ GK +H YI+ N +
Sbjct: 336 CHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGN 395
Query: 279 F----LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
L T ++ YAKCG + A ++F S ++L +WNAM+ GLAM+G +L F
Sbjct: 396 VNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEE 455
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
MI +PD +T +G L C+ AG V+ + F M YG+S +L+HYGCM DLL R+G
Sbjct: 456 MINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSG 515
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLAD 454
+EA ++ M M D +W LL CRIHG VE E AE + +L+PE+ G Y +L++
Sbjct: 516 KFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSN 575
Query: 455 VYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+YA A RW+DV KIR L+ +KK GC+ I+++G
Sbjct: 576 IYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDG 611
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 238/456 (52%), Gaps = 19/456 (4%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
N + +C I + QIH+ + GL L+A + A SP+ D LSYA
Sbjct: 30 NLLAKCPDIPSLKQIHSLIIKSGL---------HNTLFAQSKLIEFC-ALSPSRD-LSYA 78
Query: 65 LSIFNNIPY--PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
LS+F++I + P+ F +NT+IRAH+L +P +++ LFSQM + P+ ++FP L ++C+
Sbjct: 79 LSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCA 138
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + A+ +H+ LKL V SL+H+Y LR A+ +FD+ RD VS
Sbjct: 139 KSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTA 198
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LI GYV G + AR+LFD +P +D VSW ++AGY QS + EEA+ F M + D+ P+
Sbjct: 199 LITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPN 258
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+VS LSAC L LE GK I ++ + L LVD Y+KCG I TA ++F+
Sbjct: 259 QSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFD 318
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
++K++ WN M+ G L +LV F M+ + P+ VT L L C+ G +D
Sbjct: 319 GMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDL 378
Query: 363 ARKL---FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+ + D+ G + + + + + G +E A ++ + M + W+ ++
Sbjct: 379 GKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMG-SRSLASWNAMI 437
Query: 420 GGCRIHGNVEIAEAAAEHVMK--LKPEDGGVYKVLA 453
G ++G+ E A E ++ +P+D VL+
Sbjct: 438 SGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLS 473
>gi|224115616|ref|XP_002332100.1| predicted protein [Populus trichocarpa]
gi|222874920|gb|EEF12051.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 256/490 (52%), Gaps = 43/490 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
FIK +KQIH + TKGLLF +P +SP
Sbjct: 16 FIKHQNQVKQIHSL---LTTKGLLFYNP-------------------NTSPN-------- 45
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+N + +T +NT+ RA+ F + LF+ M PP+ ++FP +++A + C
Sbjct: 46 ---DNSKWKTTLLFNTLNRAYLNFGQHQQTLHLFALMLAHQTPPNSHTFPSVIKAATHSC 102
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ ++H+Q + G + D F+ SL+ +Y F L +A ++FDEI + +V N +D
Sbjct: 103 LF-IGTSLHTQAINRGVLYDPFIQTSLLGMYSQFGYLLNACKVFDEISHPCIVEYNATLD 161
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD------I 239
Y K GD+ A LF MP RD VSW +++ G+A++ EAI+LF MM D +
Sbjct: 162 AYAKNGDMGSACCLFKSMPKRDVVSWTSVINGFAKNGLFGEAIRLFREMMLHDDVKCCFV 221
Query: 240 KPDNIALVSALSACARLGE---LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
KP+ VS LS+CA L E L GK IH YI N++ V F+ T L+DFY K G ++
Sbjct: 222 KPNEATYVSVLSSCANLDERGVLCIGKQIHGYIVRNEVFVTVFIGTTLIDFYGKVGCLSN 281
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
AI ++ K + TWNA++ LA +G +L F +M + P+ VT + L C+
Sbjct: 282 AIRVYNQMMVKKVCTWNAIISSLANNGREEQALDMFKKMKGEGLCPNEVTFIAVLTACAR 341
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
A LV+ +LF M +G+ ++HYGC+ DLLG AGL+ EA E I++MP D
Sbjct: 342 AKLVEIGLELFQSMAGEFGLVPIMEHYGCVVDLLGMAGLLREASEFIRRMPFEPDASALG 401
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG C+IHG +++ +++L+P+ G Y L+ ++ +RW IR+++ +
Sbjct: 402 ALLGACKIHGAIDLGNEVGSRLLELQPQHCGQYVALSSIHVGVNRWGVAADIRKTMVEAR 461
Query: 477 IKKNAGCSLI 486
I+ CSLI
Sbjct: 462 IRIVPACSLI 471
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/315 (42%), Positives = 201/315 (63%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
DV + L+D Y K G A ++F+ MP R+ VSWG L+AGY Q ++ +EA+++F M+
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
I+P+ + SAL+ACA+LG L+QG+ +H Y++ +++ ++S L T LVD Y+KCG ++
Sbjct: 299 IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVD 358
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+ +FE K+++ W AM+ GLAM G SL FS+MI +R++P+GVT LG L C+
Sbjct: 359 EALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA 418
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GLVDE +LF M Y + + HYGCM DLLGRAG +EEA++ I+ MPM VW
Sbjct: 419 HGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVW 478
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
L GC IH E+ E H++KL+P G Y +LA++Y+ +WE +RR +
Sbjct: 479 GALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGK 538
Query: 476 KIKKNAGCSLIQLNG 490
+ K+ GCS I++NG
Sbjct: 539 GVDKSPGCSWIEVNG 553
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 205/421 (48%), Gaps = 52/421 (12%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C T + Q + +T GL A TF S T D L Y L +F
Sbjct: 17 KCGTFDHLKQTTSILITSGL--------------AHHTFFLSDILRSATKD-LGYTLLLF 61
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ + P F +NTIIR + S P +V +S++R + PD ++FP LL+A S+L + +
Sbjct: 62 DRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNEN 121
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
Q ++ ++K G D FV NSL+ + C GYV
Sbjct: 122 PFQ-FYAHIVKFGLDFDAFVQNSLVSAF---------------------AHC-----GYV 154
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+R+LF +D VSW L+ G ++ + EA++ F M ++ D + +VS
Sbjct: 155 DC-----SRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVS 209
Query: 249 ALSACARLGELEQGKNIHR-YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
L A A L ++ G+ +H Y+E ++ D ++ + LVD Y+KCGY + A+++F +
Sbjct: 210 VLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR 269
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
NL +W A++ G + +L F MI I+P+ T+ AL C+ G +D+ R L
Sbjct: 270 NLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLH 329
Query: 368 DEME-SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ ++ S G++ +L + D+ + G ++EAL + +K+P DV+ W+ ++ G + G
Sbjct: 330 EYVDRSKLGLNSKLG--TALVDMYSKCGCVDEALLVFEKLP-AKDVYPWTAMINGLAMRG 386
Query: 427 N 427
+
Sbjct: 387 D 387
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 264/512 (51%), Gaps = 27/512 (5%)
Query: 3 LNNFIKRC---KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAI--TTFKPISS----- 52
L + +++C K++KQ IH H G F P +L+ L + KPI +
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITG--FKRPNTLLSNHLIGMYMKCGKPIDACKVFD 106
Query: 53 --------------ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVL 98
+ + L A +F+++P S+NT++ + + A+
Sbjct: 107 QMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 99 FSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV 158
+ + R I + +SF LL AC + L + H QVL GF+ +V + S++ Y
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
++ A+ FDE+ +D+ TLI GY K GD+ A +LF MP ++ VSW L+AGY
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
+ A+ LF M+ L +KP+ S L A A + L GK IH Y+ +R ++
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
+ + L+D Y+K G + + +F +K + WN M+ LA HGLG +L MI+
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
R++P+ T++ L CSH+GLV+E + F+ M +G+ + +HY C+ DLLGRAG +
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
E + I++MP D +W+ +LG CRIHGN E+ + AA+ ++KL PE Y +L+ +YA
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYA 526
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ +WE V K+R + ++ K S I++
Sbjct: 527 DHGKWELVEKLRGVMKKRRVNKEKAVSWIEIE 558
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+ ++ +A + +A+ ++ I+ L S L C L+QGK IHR++++
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 273 QI-RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
R ++ LS L+ Y KCG A ++F+ +NL++WN M+ G G+ + V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
F M E D V+ ++G + G + EA + E
Sbjct: 136 FDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKE 169
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 238/431 (55%), Gaps = 33/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A +F+ I S+N +I + + A+ L+ M ++ PD + ++ A
Sbjct: 147 INNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSA 206
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+Q S L + +HS + GF ++ ++N
Sbjct: 207 CAQSGSIELGRQLHSWIEDHGFGSNIKIVN------------------------------ 236
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
LID Y K G++ A LF + +D +SW TL+ G+ + +EA+ LF M+
Sbjct: 237 -VLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGES 295
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYI--ELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
P+++ ++S L ACA LG ++ G+ IH YI L + S L T L+D YAKCG I A
Sbjct: 296 PNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAK 355
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F+S ++L +WNAM+ G AMHG + FS+M + I PD +T +G L CSH+G
Sbjct: 356 QVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSG 415
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
++D R +F M Y ++ +L+HYGCM DLLG GL +EA EMI+ MPM D +W L
Sbjct: 416 MLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSL 475
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C++H NVE+ E+ A++++K++PE+ G Y +L+++YA A RW+ V KIR L+ IK
Sbjct: 476 LKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIK 535
Query: 479 KNAGCSLIQLN 489
K GCS I+++
Sbjct: 536 KAPGCSSIEID 546
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 217/381 (56%), Gaps = 2/381 (0%)
Query: 52 SASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF 111
S SP D LSYA+SIF I P+ +NT+ R H L S + A+ L+ M ++ + P+
Sbjct: 6 SVLSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNS 65
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
YSFPFLL++C++ + Q IH VLKLG+ D++V SL+ +Y RL DA ++FD
Sbjct: 66 YSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDR 125
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+R VVS LI GY G + +AR+LFD + +D VSW +++GY ++ +EA++L+
Sbjct: 126 SSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELY 185
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
+MM ++KPD +V+ +SACA+ G +E G+ +H +IE + + + L+D Y+KC
Sbjct: 186 KDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKC 245
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G + TA +F+ +K++ +WN ++ G L + +L+ F M+ + P+ VT+L L
Sbjct: 246 GEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVL 305
Query: 352 VGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
C+H G +D R + + + + GV+ + D+ + G IE A ++ M +
Sbjct: 306 PACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTR 364
Query: 411 DVFVWSGLLGGCRIHGNVEIA 431
+ W+ ++ G +HG A
Sbjct: 365 SLSSWNAMIFGFAMHGKANAA 385
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 239/431 (55%), Gaps = 34/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN--AVVLFSQMRTVS-IPPDFYSFPFL 117
L+YA +F+ I P T ++N++IR + SPL A+V ++ M + S PD Y+F FL
Sbjct: 448 LAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFL 507
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+AC + + +H +++ G+ +DV
Sbjct: 508 LKACEEAKEEGKCREVHGFIIRFGYD-------------------------------QDV 536
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V C LI Y G + A ++F+ MP RD VSW ++++ Y Q+ EEA++++ M
Sbjct: 537 VLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRIS 596
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++ D LVS LS+CA +G L G +HR+ ++ + F+ L+D YAKCG + +A
Sbjct: 597 NVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASA 656
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+ IF S ++++FTWN+M+VG +HG G ++ +F M+ A ++P+ +T LG L GCSH
Sbjct: 657 LSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQ 716
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLV E + F M S + + +KHYGCM DL GRAG ++EALE+I+ P D +W
Sbjct: 717 GLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRT 776
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG C+IH NVEI E A ++++L G +L+ +YA A + V ++R+ + + I
Sbjct: 777 LLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGI 836
Query: 478 KKNAGCSLIQL 488
K G S I++
Sbjct: 837 KTTPGWSWIEV 847
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 239/433 (55%), Gaps = 7/433 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + + S+N +I + + A+ F +M + PD + ++ AC+
Sbjct: 210 ARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACAT 269
Query: 124 LCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + IH++V+K F D+ + N+L+ +Y R+ +A+ +FD + R+ VS T
Sbjct: 270 LAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETT 329
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY K+ + AR +F + +D VSW L+AGY Q+ + EEA+ LF + + P
Sbjct: 330 MVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPT 389
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDS------FLSTGLVDFYAKCGYINT 296
+ + L+A A L +LE G+ H ++ + R S F+ L+D Y KCG +
Sbjct: 390 HYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEE 449
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+ +FE+ EK+ +WN M++G A +G G +L F +M+E+ KPD VT++G L CSH
Sbjct: 450 GLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSH 509
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGLV+E R+ F M +G+ HY CM DLLGRAG +EEA ++I+ MP D VWS
Sbjct: 510 AGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWS 569
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C++H N+ + + AE + ++ P G Y +LA++Y+ RW D V +R+ +
Sbjct: 570 SLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRG 629
Query: 477 IKKNAGCSLIQLN 489
+ K GCS I +
Sbjct: 630 VVKQPGCSWIDIQ 642
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 159/299 (53%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D F LL C +L S A+++H ++++ F +VF+ N L+ VY L A+++F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
D + R+V S N++I ++ G + + LF MP +D SW +++AG+AQ D+ EEA+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
F M D ++ + S LSAC+RL +L+ G IH I ++ +D F+ +GL+DFY+
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG + A +F+ +EKN+ +WN ++ +G +L F RM E KPD VT+
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
+ C+ E ++ + +L + D+ + G + EA + +MP+
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPV 321
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 146/335 (43%), Gaps = 45/335 (13%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ +P S+N++I A+ F +M + YSF L ACS+L
Sbjct: 112 LFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKD 171
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L IH + K + DVF+ + L+ Y + A+ +FD + ++VVS N LI
Sbjct: 172 LKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITC 231
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y + G EA++ F M +L KPD + L
Sbjct: 232 YEQNGPAI-------------------------------EALEAFGRMTELGFKPDEVTL 260
Query: 247 VSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
S +SACA L ++G IH R ++ ++ R D L LVD YAKCG +N A +F+
Sbjct: 261 ASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV-GCSHAGLVDEAR 364
+N + M+ G A + + V +R + A IK + AL+ G + G +EA
Sbjct: 321 VRNAVSETTMVSGYA-----KSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEAL 375
Query: 365 KLFD--EMESV----YGVSKELKHYGCMADL-LGR 392
LF + ESV Y L +ADL LGR
Sbjct: 376 GLFRMLKRESVCPTHYTFGNLLNASANLADLELGR 410
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 234/436 (53%), Gaps = 35/436 (8%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHT---LFSSPLNAVVLFSQMRTVSIPPDFYSFP 115
DPL AL + ++P F NT+IRAH + S L A F M ++ P+ ++FP
Sbjct: 73 DPLVAAL-LRPSVPL-DAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFP 130
Query: 116 FLLRACSQLC-SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
FLL+AC+ L S + H+ LK GF D +V N+L+H+Y F
Sbjct: 131 FLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCF--------------- 175
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
G L AR +FDRMP AV+W ++ GY + +A++LF M
Sbjct: 176 --------------GGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREM 221
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
++ D + ++ L+A LG LE + + R++E I L L+D AKCG +
Sbjct: 222 QANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDV 281
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+ A+ +FE Q++++ +W +++ LAM G G+ ++ F M A + PD V +G L C
Sbjct: 282 DGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTAC 341
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
SHAG+VDE FD M+ YG+ +++HYGCM D+ GRAG++E A+E ++ MP+ + +
Sbjct: 342 SHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVI 401
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W L+ CR HG +E+ E+ ++ P Y +L++V+A RW++ +IRR +
Sbjct: 402 WRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSK 461
Query: 475 GKIKKNAGCSLIQLNG 490
IKK GCS+++L+G
Sbjct: 462 RGIKKVPGCSIVELDG 477
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 262/474 (55%), Gaps = 29/474 (6%)
Query: 41 LYAITTFKPISSASSPTTDPLSYA-LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVL- 98
L A T P S + P + P S F + P+ + + + R+HT SP++ +V
Sbjct: 3 LPAYTATTPSSLVTHPNSSPNSKPNQPTFPSRPHSTKYH---LTRSHT--HSPIDPIVSW 57
Query: 99 -------------------FSQMRTVSIPPDFYSFPFLLRACSQLCSHSL--AQTIHSQV 137
FS+M+ + P+ +F LL AC+ L +IH+ V
Sbjct: 58 TSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYV 117
Query: 138 LKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
KLG + V V +L+ +Y +L A +FDE+ R+ VS NT+IDG ++ G++ A
Sbjct: 118 RKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEA 177
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
LFD+M RDA+SW +++ G+ + E+A++ F M ++PD + ++S L+ACA L
Sbjct: 178 IVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANL 237
Query: 257 GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML 316
G L G I+R++ + + +S L+D Y++CG I A ++FE +++L +WN+M+
Sbjct: 238 GALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMI 297
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
VG A++G +L +F+ M + +PDGV+ GAL CSH+GLVDE + FD M+ +
Sbjct: 298 VGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKI 357
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
S ++HYGC+ DL RAG +E+AL +I MPM + V LL CR HG+V +AE +
Sbjct: 358 SPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMK 417
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++ ++ P Y +L+++YA RW+ K+R+ + A I K G S I+++G
Sbjct: 418 YLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDG 471
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 244/436 (55%), Gaps = 7/436 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A F+++ + S+N++I + A+ +F +M I PD + + A
Sbjct: 202 VASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASA 261
Query: 121 CSQLCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C+ L + IH++V+K + D+ + N+L+ +Y R+ +A+ +FD + RDVVS
Sbjct: 262 CASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVS 321
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+++ GY KA + AR +F M R+ VSW L+AGY Q+ + EEA++LF + I
Sbjct: 322 ETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV------DSFLSTGLVDFYAKCGY 293
P + + L+ACA L +L+ G+ H +I + D F+ L+D Y KCG
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGL 441
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ +FE E++ +WNAM+VG A +G G +L F M+ + +PD VT++G L
Sbjct: 442 VEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSA 501
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSHAGLV+E R F M +G+ HY CM DLLGRAG ++EA +I+ MPM D
Sbjct: 502 CSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAV 561
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LL C++HGN+ + + AE ++++ P + G Y +L+++YA RW+DVV++R+ +
Sbjct: 562 VWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMR 621
Query: 474 AGKIKKNAGCSLIQLN 489
+ K GCS I +
Sbjct: 622 QMGVIKQPGCSWISIQ 637
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 164/331 (49%), Gaps = 1/331 (0%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D F LL C + S A+ +H++++K F ++F+ N L+ VY L DA+++F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
D + R+ S N ++ K G L A LF MP RD SW +V+G+AQ D+ EEA++
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+M D + + SALSACA L +L G IH I ++ +D ++ + LVD Y+
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KC + +A F+ +N+ +WN+++ +G +L F RM+ I+PD +T+
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
C+ + E ++ + +L + D+ + + EA + +MP+
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL- 316
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK 440
DV + ++ G +V+ A ++M+
Sbjct: 317 RDVVSETSMVSGYAKASSVKAARLMFSNMME 347
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 67/339 (19%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS-------------------- 100
L A +F+++ +TFS+N ++ A T F + A+ LF
Sbjct: 70 LEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQR 129
Query: 101 -----------QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVL 149
M + + YSF L AC+ L S+ IH + K + DV++
Sbjct: 130 DRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMG 189
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
++L+ +Y + AQ FD++ R++VS N+LI Y + G
Sbjct: 190 SALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGP----------------- 232
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH-RY 268
AG +A+++F MM+ I+PD I L S SACA L + +G IH R
Sbjct: 233 ------AG--------KALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARV 278
Query: 269 IELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
++ ++ R D L LVD YAKC +N A +F+ +++ + +M+ G A + +
Sbjct: 279 MKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAA 338
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ FS M+E + V+ + G + G +EA +LF
Sbjct: 339 RLMFSNMMERNV----VSWNALIAGYTQNGENEEAVRLF 373
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 264/480 (55%), Gaps = 20/480 (4%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTF 77
Q+H H G F S ++ +L F +A +F+ P +
Sbjct: 101 QVHTHVFKSG--FESNVFVVNALLQVYFVFGDARNACR-----------VFDESPVRDSV 147
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
SYNT+I ++ +F++MR + PD Y+F LL ACS L + + +H V
Sbjct: 148 SYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLV 207
Query: 138 L-KLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD-VVSCNTLIDGYVKAGDLA 194
KLG F + ++N+L+ +Y L A+ + + V + +L+ Y G++
Sbjct: 208 YRKLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVE 267
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
AR+LFD+M RD VSW +++GY + +EA++LF + DL ++PD + +V+ALSACA
Sbjct: 268 VARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACA 327
Query: 255 RLGELEQGKNIHRYIELN--QIRVDSFLSTGLVDFYAKCGYINTAIEIF--ESSQEKNLF 310
RLG LE G+ IH + + Q + + +VD YAKCG I A+++F S K F
Sbjct: 328 RLGALELGRRIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTF 387
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+N+++ GLA HG G ++ F M ++PD VT + L C H+GLVD ++LF+ M
Sbjct: 388 LYNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKRLFESM 447
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
S YGV+ +++HYGCM DLLGRAG + EA +I+ MP + +W LL C++ G+VE+
Sbjct: 448 LSEYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVDGDVEL 507
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
A A++ ++ ++ + G Y +L+++ D+ ++ +RR++D I+K G S +++NG
Sbjct: 508 ARLASQELLAMENDHGARYVMLSNMLTLMDKHDEAASVRRAIDNVGIQKPPGWSHVEMNG 567
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 206/436 (47%), Gaps = 71/436 (16%)
Query: 50 ISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP- 108
IS ++ ++ L ++ +F IP P F +N IIRA +L +P NA+ L+ +M + S P
Sbjct: 17 ISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPI 76
Query: 109 -PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
PD ++FPFLL++C++L L +H+ V K GF +VFV+N+L+ VY VF R+A
Sbjct: 77 FPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACR 136
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
+FDE RD VS NT+I+G V+AG + ++F M G+
Sbjct: 137 VFDESPVRDSVSYNTVINGLVRAGRAGCSMRIFAEMR-----------GGF--------- 176
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHR--YIELNQIRVDSFLSTGLV 285
++PD V+ LSAC+ L + G+ +H Y +L + L LV
Sbjct: 177 -----------VEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENELLVNALV 225
Query: 286 DFYAKC--------------------------------GYINTAIEIFESSQEKNLFTWN 313
D YAKC G + A +F+ E+++ +W
Sbjct: 226 DMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGERDVVSWT 285
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
AM+ G G + +L F + + ++PD V ++ AL C+ G ++ R++ + +
Sbjct: 286 AMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRRIHHKYDRD 345
Query: 374 YGVSKELKHYGC-MADLLGRAGLIEEALEM-IKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + C + D+ + G IE AL++ +K F+++ ++ G HG E A
Sbjct: 346 SWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIMSGLAHHGRGEHA 405
Query: 432 EAAAEH--VMKLKPED 445
A E ++ L+P++
Sbjct: 406 MALFEEMRLVGLEPDE 421
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 257/486 (52%), Gaps = 42/486 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C + ++ QIH H L GL H +L T F ISS T S+
Sbjct: 35 LLQACNALPKLTQIHTHILKLGL------HNNPLVL---TKFASISSLIHATDYAASFLF 85
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFS-SPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
S + F +NT+IRA+ S A+ L+ M +I P+ +++PF+L+AC+ L
Sbjct: 86 SAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGL 145
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY-CVFHRLRDAQELFDEILYRDVVSCNTL 183
+L QT+H V+K GF CD+ V N+++H+Y C + A+++FDE+ D V+ + +
Sbjct: 146 EVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAM 205
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY + G + EA+ LF M ++ PD
Sbjct: 206 IGGYARVG-------------------------------RSTEAVALFREMQMAEVCPDE 234
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I +VS LSAC LG LE GK I YIE ++I +S L+D +AKCG I+ A+++F +
Sbjct: 235 ITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRA 294
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
EK + +W +++VG+AMHG G+ + F M + + PD V +G L CSH+GLV+
Sbjct: 295 MNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERG 354
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+ F M Y + +++HYGCM D+ R GL++EALE ++ MP+ + + L+ CR
Sbjct: 355 REYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACR 414
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HG ++ E + +MK +P Y +L+++YA WE KIR ++ +KK G
Sbjct: 415 GHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGS 474
Query: 484 SLIQLN 489
++I+++
Sbjct: 475 TMIEID 480
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 243/432 (56%), Gaps = 7/432 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P + S+N++I + A+VLF M PD + ++ AC+
Sbjct: 946 ARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAG 1005
Query: 124 LCSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + + +H++V+K F D+ + N+L+ +Y R R A+ +FD + R VVS +
Sbjct: 1006 LAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETS 1065
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LI GY ++ ++ A+ +F +M ++ ++W L+A YAQ+ + EEA++LF + + P
Sbjct: 1066 LITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPT 1125
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVD------SFLSTGLVDFYAKCGYINT 296
+ + L+AC + +L+ G+ H ++ R D F+ LVD Y K G I+
Sbjct: 1126 HYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 1185
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
++FE ++ +WNAM+VG A +G + +L F RM+ ++ PD VT++G L C H
Sbjct: 1186 GAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGH 1245
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLV+E R+ F M +G+ HY CM DLLGRAG ++E E+IK+M M D +W+
Sbjct: 1246 SGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWA 1305
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LLG CR+H NVE+ E AA + +L P + G Y +L+++YA +W DV ++R S+
Sbjct: 1306 SLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRG 1365
Query: 477 IKKNAGCSLIQL 488
+ K GCS I++
Sbjct: 1366 VSKQPGCSWIEI 1377
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 174/382 (45%), Gaps = 35/382 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F + + S+N ++ + A++LF QMR + D + +L AC+
Sbjct: 337 AKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTG 396
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + +H+ +K GF + N+L+ +Y LR A+ L
Sbjct: 397 ILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLL-------------- 442
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
LF+ RD+ SW +L++GY + E A+ M ++ P+
Sbjct: 443 ---------------LFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQ 486
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
SAL+ACA + L+QG IH Y+ +D L + L+D Y KC + +I IFE+
Sbjct: 487 STFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEA 546
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+++ WN+M+ G A G G L F M + IK D VT LGALV C G V
Sbjct: 547 RPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLG 606
Query: 364 RKLFDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R F M ES+ ++HY CM +LLG+ G + E + ++ MP +W +
Sbjct: 607 RSYFTLMMDESII---PRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDC 663
Query: 422 CRIHGNVEIAEAAAEHVMKLKP 443
CR +GN ++ E AA+ + P
Sbjct: 664 CREYGNRKLGERAAKCINDSNP 685
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 182/372 (48%), Gaps = 7/372 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A F++I P+ S+N I+R + L AV +F +M + + P Y+ + A
Sbjct: 202 LADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLA 261
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + + IH+ VL+ G+ V V +S++ +Y + AQ LF+ +D+V
Sbjct: 262 CRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMS 321
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+++ G G +A A+++F+ M R+ VSW ++ GY +S A+ LF M +
Sbjct: 322 TSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETRE 381
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA--I 298
D I L S LSAC + ++ +G+ +H + L LV Y+KCG + +A +
Sbjct: 382 FDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERL 441
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE E++ ++WN+++ G H + +L ++M ++ + P+ T AL C++
Sbjct: 442 LLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIF 500
Query: 359 LVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
L+ + ++ M Y + L+ + D+ + + ++ + + P DV +W+
Sbjct: 501 LLKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCKCRQFDYSIRIFEARP-SRDVILWNS 557
Query: 418 LLGGCRIHGNVE 429
++ GC G E
Sbjct: 558 MIFGCAYSGKGE 569
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 21/341 (6%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLR 119
L A +F+ IP+P+TFSYN ++ AH P +A LF +IP PD S+ ++
Sbjct: 811 LPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFH-----AIPDPDQCSYNAVIA 865
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY----R 175
A +Q + A + + F+ + + S + R ++ + +
Sbjct: 866 ALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAK 925
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
DV + L+D Y K AR++F+ MP R+ VSW +L+ Y Q+ EA+ LF +MM
Sbjct: 926 DVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMM 985
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYI 294
PD + L S +SACA L +G+ +H R ++ ++ R D LS LVD YAKCG
Sbjct: 986 KAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRT 1045
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A +F+ +++ + +++ G A + + FS+M+E + V I
Sbjct: 1046 RAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLI----AAY 1101
Query: 355 SHAGLVDEARKLFDEM--ESV----YGVSKELKHYGCMADL 389
+ G +EA +LF + ESV Y L G +ADL
Sbjct: 1102 AQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADL 1142
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 155/331 (46%), Gaps = 4/331 (1%)
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
LK F+ + F+LN+L+ Y RL DA+ +FDEI + + S N L+ + + G A AR
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
LF +P D S+ ++A AQ + +A+ M D + + SALSACA
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
+ G +H + + D ++ + L+D YAKC + A +FE+ E+N+ +WN+++
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
+G +LV F M++A PD VT+ + C+ E R++ +
Sbjct: 967 CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFR 1026
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
+++ + D+ + G A + +M V + L+ G NVE A+
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRMA-SRSVVSETSLITGYARSANVEDAQMVFSQ 1085
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
+++ ++ + VL YA E+ +++
Sbjct: 1086 MVE---KNVIAWNVLIAAYAQNGEEEEALRL 1113
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 4/259 (1%)
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N I+ G +A AR+LFD MP RD SW ++ +++ EA+ LF NM L I+
Sbjct: 89 NRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P + + S LS CA +L + +H +I + + L T LVD Y C + A
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRA 208
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ E N +WN ++ + G+G +++ F RM+ A ++P G T+ A++ C +
Sbjct: 209 FDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNAL 268
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF---VWSG 417
+E R + + +G + + D+ + G ++ A + PM V + SG
Sbjct: 269 EEGRCIHAFVLR-HGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSG 327
Query: 418 LLGGCRIHGNVEIAEAAAE 436
L RI + E E
Sbjct: 328 LASCGRIADAKRVFEGMKE 346
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 171/420 (40%), Gaps = 81/420 (19%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+N II A + P A+ LFS M ++ I P + +L C++
Sbjct: 104 ARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAE 163
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A+ +H + K F +V + +L+ VY N
Sbjct: 164 CLDLCGARQLHGHIAKRDFQSNVILGTALVDVYG-----------------------NCF 200
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ LA AR+ FD + +A+SW +V Y + + A+ +F M+ ++P
Sbjct: 201 L--------LADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLG 252
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT------- 296
+ A+ AC LE+G+ IH ++ + + + +VD YAKCG ++
Sbjct: 253 YTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNL 312
Query: 297 ------------------------AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
A +FE +E+NL +WNAML G +L+ F
Sbjct: 313 APMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLF 372
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY------GCM 386
+M + + D +T+ L C+ G++D + E V+ + + + +
Sbjct: 373 QQMRQETREFDAITLGSVLSACT--GILDIGKG-----EEVHAFAIKCGFFSSPILKNAL 425
Query: 387 ADLLGRAGLIEEALEMIKKMPMGG--DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
+ + G + A E + MG D + W+ L+ G H ++EAA + K++ E
Sbjct: 426 VRMYSKCGCLRSA-ERLLLFEMGSERDSYSWNSLISGYERH---SMSEAALYALTKMQSE 481
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 259/533 (48%), Gaps = 75/533 (14%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + C IKQ +QIH GL F P A K + + + +S
Sbjct: 61 LQKLEQSCTNIKQFNQIHTQLTVLGL-FQHP-------FAASRYIKKLCAC----LNSVS 108
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF-SQMRTVSIPPDFYSFPFLLRAC 121
+ +S++N+I P F NTI+R+ + P A+ + +M + P+ Y+FP + + C
Sbjct: 109 HCVSLYNHIEEPDAFMCNTIMRSFVNVNDPFGALRFYYEKMIAKWVLPNHYTFPLVAKVC 168
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ--------------- 166
+ + S Q +H+ V+K GF D+FV NS + Y V R DA+
Sbjct: 169 ADIGSLREGQKVHALVVKFGFELDLFVRNSFIRFYSVCGRTSDARMVFDNGFVLDLVSWN 228
Query: 167 ----------------ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
E+FDE+ RD+ + N++I GYV GD+ AR LFD+MP RD VS
Sbjct: 229 SMIDGYVKNGELGLAREIFDEMYERDIFTWNSMISGYVGVGDMEAARGLFDKMPSRDVVS 288
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNM---------------------------MDL----DI 239
W ++ G+A+ A + F M D+ D
Sbjct: 289 WNCMIDGFARIKDVSMAAKFFDEMPLRNVVSWNVMLALYLRCKKYSDCLRFFDMMVGGDF 348
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD +LVS L+ACA L L+QGK +H Y++ N I+ D LST L+ YAKCG ++ A E
Sbjct: 349 VPDEASLVSVLTACAELKMLDQGKWVHSYMKDNGIKPDMLLSTALLTMYAKCGAMDLARE 408
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ EK++ +WN+M++G +HG G +L F M + P+ T + L CSH+G+
Sbjct: 409 VFDKMPEKSVVSWNSMIIGYGIHGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGM 468
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V FD M Y + + +HYGC+ DLLG+AGL E + ++ +K + +W LL
Sbjct: 469 VWNGWWYFDLMHRKYRIQPKPEHYGCLVDLLGQAGLKEPSEDLTRKTHTEVEPTLWGDLL 528
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
CR H E E A+ ++KL P Y +L++ Y RW+DV +R +L
Sbjct: 529 SACRAHCISEPGEILAKQLIKLFPNHVVPYLLLSNTYVAEGRWDDVENLRMTL 581
>gi|356515150|ref|XP_003526264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Glycine max]
Length = 503
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 257/494 (52%), Gaps = 44/494 (8%)
Query: 5 NFIKRCKTI-KQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+ ++CK + KQ+ QIH+ +T G L H + P SS S
Sbjct: 43 HLTQKCKKLQKQMKQIHSLIITNGHL-----HQHQNV--------PSSSLS--------- 80
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+P+ T YN +I A+ + + A+ +F+ M PP+ ++FP LL+
Sbjct: 81 -------LPWMPTLLYNALISAYHIHNHN-KALSIFTHMLANQAPPNSHTFPPLLK---- 128
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ L T+HSQ LK G + D F+L +L+ +Y H L A+ +F+E +V+CN +
Sbjct: 129 ISPLPLGATLHSQTLKRGLLSDGFILTTLLALYARNHLLPHARMVFEEFPMFCIVACNAM 188
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD----- 238
I+ + GD+ A LF+RMP RD SW T+V G+A +I+ F NMM+
Sbjct: 189 INAFSMNGDMEAAVALFERMPRRDVFSWTTVVDGFALKGNFGASIRFFRNMMNHKDVVAG 248
Query: 239 -IKPDNIALVSALSACARL---GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+KP+ S LS+CA L L+ GK +H Y+ +N++++ F+ T L+ Y K G +
Sbjct: 249 LVKPNEATCSSVLSSCANLDGKAALDWGKQVHGYVVMNEVKLGVFVGTSLIHLYGKMGCL 308
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+ A +F + + TWNAM+ LA HG + +L F RM +KP+ +T L C
Sbjct: 309 SNAENVFRVMVVREVCTWNAMISSLASHGREKNALDMFDRMKLHGLKPNSITFAAVLTAC 368
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ LV E LF M +G+ LKHYGC+ DLLGRAG IEEA E+I+ MP D V
Sbjct: 369 ARGNLVREGLDLFRSMWYDFGIEPNLKHYGCVIDLLGRAGHIEEAAEIIRNMPFQPDASV 428
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
LG CRIHG +E+ E +++++L+ + G Y +L+ + A +RW+ +RR +
Sbjct: 429 LGAFLGACRIHGAIELGEEIGKNMLRLQTQHSGQYVLLSSMNAEKERWDRAANLRREIME 488
Query: 475 GKIKKNAGCSLIQL 488
I+K S++ L
Sbjct: 489 AGIQKIPAYSMLHL 502
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 276/557 (49%), Gaps = 92/557 (16%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
K+C + K + Q+H + + H+L+ K I + P Y+ +
Sbjct: 32 KQCSSTKTLQQVHTQMVVNSSIHTPNNHLLS---------KAIHLKNFP------YSSLL 76
Query: 68 FNNI-PYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
F++I P+P+ +++N +IRA T + PL A+ LF +M ++S+ PD ++FPF +C+ L
Sbjct: 77 FSHIAPHPNDYAFNIMIRALTTTWHNYPL-ALSLFHRMMSLSLTPDNFTFPFFFLSCANL 135
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VF----HR--------- 161
S S A HS + KL D +SL+ Y VF HR
Sbjct: 136 ASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMI 195
Query: 162 --------LRDAQELFDEILYRD------------VVSC--------------------- 180
R+A E+F E+ RD + +C
Sbjct: 196 AGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGM 255
Query: 181 -------NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
+ LI Y K G+L AR++FD M RD ++W +++GYAQ+ +EAI LF
Sbjct: 256 TLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHG 315
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M + + + I L + LSACA +G L+ GK I Y + D F++T L+D YAK G
Sbjct: 316 MKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGS 375
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTILGAL 351
++ A +F+ +KN +WNAM+ LA HG + +L F M + +P+ +T +G L
Sbjct: 376 LDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLL 435
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
C HAGLVDE +LFD M +++G+ +++HY CM DLL RAG + EA ++I+KMP D
Sbjct: 436 SACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPD 495
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
LLG CR NV+I E ++++ P + G Y + + +YAN + WED ++R
Sbjct: 496 KVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLL 555
Query: 472 LDAGKIKKNAGCSLIQL 488
+ I K GCS I++
Sbjct: 556 MRQKGITKTPGCSWIEV 572
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 272/517 (52%), Gaps = 37/517 (7%)
Query: 4 NNFIKRCKTIKQIHQ---IHAHFLTKGLLFL-----------SPCHILTTILYAITTFKP 49
++ I +C T + + +H+HF+ L+F S C + + + + P
Sbjct: 18 SSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSA-HKVFHVLP 76
Query: 50 ISSASSPTTDPLSYALS--------IFNNIPYPSTFSYNTIIRA---HTLFSSPLNAVVL 98
+ + S +Y+ S + + +P P+ SYN++I H LN +
Sbjct: 77 VKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLN---V 133
Query: 99 FSQM--RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY 156
F M + ++ D ++ L+ +C+ L + L + +H + +G ++ + N+L+ Y
Sbjct: 134 FKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAY 193
Query: 157 CVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
+ +F + RDVVS +++ Y +A L A LF +M ++ VSW L+A
Sbjct: 194 GKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIA 253
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
G+AQ+ + +EA+ LF M + I P S LSACA L + +GK IH +I + +
Sbjct: 254 GFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHI-IRSTCI 312
Query: 277 DSFLS----TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
D F + L+D Y KCG + +A +F+ EK++ +WN+++ G A +G G SL F
Sbjct: 313 DYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVF 372
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
RMIEA I+P+ VT LG L C H GLV E ++ D ME YGV HY M DLLGR
Sbjct: 373 ERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGR 432
Query: 393 AGLIEEALEMIKKMPMGGD-VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
+EEA+ +IK+ P G D V +W LLG CRIHGN+++A AAE + +L+P + Y +
Sbjct: 433 NNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVM 492
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ ++YA A RW++ ++RR + ++K A CS I++
Sbjct: 493 VYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEV 529
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 255/490 (52%), Gaps = 44/490 (8%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + IK C + QIHAH + L+ H ++ + +A SP+ D +
Sbjct: 71 LISLIKSCSKKTHLLQIHAHIIRTSLI---QNHFISLQFLS-------RAALSPSRD-MG 119
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
Y+ +F+ I PS YN +IRA+++ SP L+ +MR +PP+ S F++++C
Sbjct: 120 YSSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCI 179
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
++ S IH+++L+ G D +L +LM +Y + +A C
Sbjct: 180 RISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEA--------------C-- 223
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL--DIK 240
++FD +P D VSW L++ + + +A+++F M +
Sbjct: 224 ---------------KVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFE 268
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD++ + L ACA LG LE G+ +H YIE + L L+ Y++CG + A I
Sbjct: 269 PDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSI 328
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ E+N+ +W+AM+ G AMHG GR ++ F +M + + PD T+ G L CSH GLV
Sbjct: 329 FKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLV 388
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ FD M V+G+ + HYGCM DLLGRAGL+++A ++I M + D +W LLG
Sbjct: 389 DDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLG 448
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIH + + E H+++LK ++ G Y +L ++Y++ W+ V +R+ + I+ +
Sbjct: 449 ACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTS 508
Query: 481 AGCSLIQLNG 490
GCS I+L G
Sbjct: 509 PGCSTIELKG 518
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 232/427 (54%), Gaps = 1/427 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ F++ +I A+ +FS MR P D ++ AC+Q
Sbjct: 219 ARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVAACAQ 278
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ H V++ G + + N L+H+Y + A+ LFD D S N++
Sbjct: 279 SEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFSWNSM 338
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY+K G + +A LF MP +D VSW T+++G Q++Q A+ +F NM ++PD
Sbjct: 339 IAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQGVRPDE 398
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +VS +SAC L LE+GK++H Y+ N+ + L T L+D Y KCGY+ A+++F
Sbjct: 399 VTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAAMDVFNI 458
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK-PDGVTILGALVGCSHAGLVDE 362
+EK WNA++VGLAM+GL SL FS M + P+ +T G L C HAGLV+E
Sbjct: 459 MEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEITFTGVLSACRHAGLVEE 518
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R F M+ Y + ++HYGCM DLLGRAG ++EA ++I+ MPM DV W LLG C
Sbjct: 519 GRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMPMSPDVPAWGALLGAC 578
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
HG E+ E ++ L P G +L+++YA W+ V +R S+ + K +G
Sbjct: 579 WKHGENEVGERVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQSVNDLRDSMKQRHVPKVSG 638
Query: 483 CSLIQLN 489
S+++++
Sbjct: 639 YSVVEMS 645
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 217/495 (43%), Gaps = 90/495 (18%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L+ + RC +++ + QIH F+ GLL +A + +SA+ P+
Sbjct: 7 LDAQLARCSSVRHLLQIHGQFIASGLL---------ADAFAASRLLLFTSATRLLPFPIH 57
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
++ + + P+ FS NT+++A L P + L++ ++ PD Y+ P L AC+
Sbjct: 58 HSFRLLRLVRCPNAFSCNTLLKAALLAGMPHLCLPLYT---SLPASPDTYTHPILAAACA 114
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
S + + S ++ GF D+++ N+LMH+Y V L DA+ +FD D VS NT
Sbjct: 115 ARRDVSEGRQVQSHAIRHGFGDDLYLRNALMHMYSVCGCLWDARRVFDAGPVWDAVSWNT 174
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAV-------------------------------SW 211
++ YV AGD+ A +F RMP R+A +W
Sbjct: 175 ILAAYVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRRGMVEEARGVFDEAECRDIFTW 234
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA-----RLGELEQG---- 262
+++ + ++D EA+ +F M D +VS ++ACA R GEL G
Sbjct: 235 TAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVAACAQSEVIRNGELCHGLVIR 294
Query: 263 ---------KN--IHRY---IELNQIR--------VDSFLSTGLVDFYAKCGYINTAIEI 300
+N IH Y +++ R +D F ++ Y K G++ A+ +
Sbjct: 295 AGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFSWNSMIAGYLKNGHVENAMTL 354
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + +K+ +W+ M+ G + +L F M ++PD VTI+ + C++ +
Sbjct: 355 FSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTNLSAL 414
Query: 361 DEARKLFDEMES-------VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
++ + + D + V G S + D+ + G +E A+++ M G
Sbjct: 415 EKGKSVHDYVRQNKCYITLVLGTS--------LIDMYMKCGYLEAAMDVFNIMEEKG-AP 465
Query: 414 VWSGLLGGCRIHGNV 428
W+ ++ G ++G V
Sbjct: 466 CWNAVIVGLAMNGLV 480
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/484 (32%), Positives = 250/484 (51%), Gaps = 54/484 (11%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C ++K + QI H G L L C ASSP + L++A + +
Sbjct: 38 CSSMKHLFQIRGHGFIAGPL-LRFC------------------ASSPLGN-LNHARVLLS 77
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
S+N +IR++ SP A+ + +MR++ I PD +FP LL+AC+ + + +
Sbjct: 78 GSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAXISAFNE 137
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ I V+K G C+V+V N+++H Y R+RDA+ +FDE+ YR V
Sbjct: 138 GRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTV------------ 185
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
VSW +++ ++ ++ LF M PD +V
Sbjct: 186 -------------------VSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVIL 226
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSAC+ LG L G+ +H + + V+ L T LVD YAKCG + A +F E+N+
Sbjct: 227 LSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNV 286
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+TW+AM++GLA HG + +L F +M ++ I P+ VT LG L CSHAGLVD+ + F +
Sbjct: 287 WTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHD 346
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG--- 426
ME V+G+ + HYG M D+L RAG ++EA I MP+ D VW LL C IHG
Sbjct: 347 MEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGIND 406
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N + + + +++L+P G + ++A++YA +W+ +RR++ +KK AG S I
Sbjct: 407 NDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCI 466
Query: 487 QLNG 490
++ G
Sbjct: 467 EVGG 470
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 11/183 (6%)
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--GYINTAIEI 300
N+ LVS C L L L QIR F++ L+ F A G +N A +
Sbjct: 21 NLNLVSTKQQCLSLLNLCSSMK-----HLFQIRGHGFIAGPLLRFCASSPLGNLNHARVL 75
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
S++ + +WN ++ A R ++ + M I PD +T L C+
Sbjct: 76 LSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAXISAF 135
Query: 361 DEARKL-FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+E RK+ D M+ +G+ + M G I +A M +M V W+ +L
Sbjct: 136 NEGRKIQVDVMK--HGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSY-RTVVSWNAVL 192
Query: 420 GGC 422
C
Sbjct: 193 SAC 195
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 236/427 (55%), Gaps = 31/427 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F++IP + S+ I + A+ +F ++ + + PD +S +L AC +
Sbjct: 162 AFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKR 221
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ I + + G + +VFV +L
Sbjct: 222 TGDLRSGEWIDEYITENGMVRNVFVATAL------------------------------- 250
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K G++ AR +FD M ++ VSW +++ GYA + +EA+ LF M++ +KPD
Sbjct: 251 VDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDC 310
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
A+V L +CARLG LE G I N+ +S L T L+D YAKCG ++ A E+F
Sbjct: 311 YAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRG 370
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
++K+ WNA + GLAM G + +L F +M ++ IKPD T +G L C+HAGLV+E
Sbjct: 371 MRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEG 430
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+ F+ ME V+ ++ E++HYGCM DLLGRAG ++EA ++IK MPM + VW LLGGCR
Sbjct: 431 RRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCR 490
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H + ++ E + ++ L+P G Y +L+++YA + +WE+ KIR + +KK G
Sbjct: 491 LHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGY 550
Query: 484 SLIQLNG 490
S I+++G
Sbjct: 551 SWIEVDG 557
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 210/435 (48%), Gaps = 60/435 (13%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
N I+ +K + IHA L GL ++L +L F + Y
Sbjct: 14 NRLIQGFSCLKHLKHIHAALLRLGLD--EDTYLLNKVLRFSFNFGNTN-----------Y 60
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+ I + P+ F +NT+IR L ++ ++ MR + PD ++FPF+L+AC++
Sbjct: 61 SFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACAR 120
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ L +HS V+K G D FV SL+++Y
Sbjct: 121 VLDSELGVKMHSLVVKAGCEADAFVKISLINLY--------------------------- 153
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
K G + +A ++FD +P ++ SW ++GY +C EAI +F ++++ ++PD+
Sbjct: 154 ----TKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDS 209
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+LV LSAC R G+L G+ I YI N + + F++T LVDFY KCG + A +F+
Sbjct: 210 FSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDG 269
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG---LV 360
EKN+ +W++M+ G A +GL + +L F +M+ +KPD ++G L C+ G L
Sbjct: 270 MLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELG 329
Query: 361 DEARKLFDEME----SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
D A L + E SV G + + D+ + G ++ A E+ + M D VW+
Sbjct: 330 DWASNLINGNEFLDNSVLGTA--------LIDMYAKCGRMDRAWEVFRGMRK-KDRVVWN 380
Query: 417 GLLGGCRIHGNVEIA 431
+ G + G+V+ A
Sbjct: 381 AAISGLAMSGHVKDA 395
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 233/430 (54%), Gaps = 31/430 (7%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ LS A +F+ + S+N +I AH + + LF+ M + + PD +++ +L
Sbjct: 427 EALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVL 486
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+ACS + + IH++++K G D FV +L+ +YC
Sbjct: 487 KACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYC--------------------- 525
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
K G + A+++ DR+ + VSW ++AG+ E+A F M+ +
Sbjct: 526 ----------KCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMS 575
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KPDN L ACA L + GK IH I ++ D ++++ LVD Y+KCG + +
Sbjct: 576 VKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSA 635
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE + K+ TWNAM+ G A HGLG +L YF RM ++P+ T + L C+H G
Sbjct: 636 LVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMG 695
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+D+ F+ M + YG+ +++HY CM D++GR+G I EAL++I++MP D +W L
Sbjct: 696 FIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTL 755
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+IHGN+EIAE A +++L+PED +L+++YA+A W V ++R+ + K+K
Sbjct: 756 LSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLK 815
Query: 479 KNAGCSLIQL 488
K GCS I++
Sbjct: 816 KEPGCSWIEV 825
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 181/428 (42%), Gaps = 49/428 (11%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTF 77
Q+HAH L C + I T + S L+ A IFN++P S
Sbjct: 298 QLHAHAL--------KCDFGSDITVGTATLDMYAKCGS-----LADAQRIFNSLPKHSLQ 344
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
YN II A+ F + + + S AC+ + + +HS
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLS 404
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+K L ++ N+++D Y K L+ A
Sbjct: 405 VK-------------------------------STLRSNICVANSILDMYGKCEALSEAC 433
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
+FD M RDAVSW ++A + Q+ EE + LF +M+ L ++PD S L AC+
Sbjct: 434 CMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQ 493
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
L G IH I + + +DSF+ L+D Y KCG I A +I + +++ + +WNA++
Sbjct: 494 ALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIA 553
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
G + + +F M++ +KPD T L C++ V +++ ++ + +
Sbjct: 554 GFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLE-LH 612
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
++ + D+ + G ++++ + +K P D W+ ++ G HG + E A +
Sbjct: 613 SDVYITSTLVDMYSKCGNMQDSALVFEKAP-NKDFVTWNAMICGYAQHG---LGEEALGY 668
Query: 438 VMKLKPED 445
+++ E+
Sbjct: 669 FERMQLEN 676
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 1/236 (0%)
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
Q +P +F +++ CS S + H++++ GFI DV++ N LM +Y
Sbjct: 33 QQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCS 92
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
L A ++F+++ RDV+S NT+I GY AG++ A + F P RD VSW ++++G+ Q
Sbjct: 93 HLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQ 152
Query: 221 SDQCEEAIQLFCNM-MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
+ +C ++I +F +M ++ D L AC+ L + G +H I D
Sbjct: 153 NGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVV 212
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L+D YAKC ++ +++IF KN W+A++ G + L L F M
Sbjct: 213 TGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEM 268
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 190/454 (41%), Gaps = 63/454 (13%)
Query: 2 TLNNFIKRC---KTIKQIHQIHAHFLTKGLL---FLSPCHI-----LTTILYAITTFKPI 50
T ++ I+ C ++K Q HA + G + ++S C + + + YA F+ +
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 51 SS----------ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
S + ++ A F + P S+N+++ ++ +F
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 101 QM-RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
M R+ + D +F +L+ACS L L +H ++++GF
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGF----------------- 207
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
Y+DVV+ + L+D Y K L + ++F +P ++ V W ++AG
Sbjct: 208 --------------YKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCV 253
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
Q+D+ ++LF M + I S +CA L L+ G +H + D
Sbjct: 254 QNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDIT 313
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
+ T +D YAKCG + A IF S + +L +NA++VG + G +L +F ++++
Sbjct: 314 VGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSG 373
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGL 395
+ + +++ GA C+ + R+L V L+ C+A D+ G+
Sbjct: 374 LGFNEISLSGAFSACASIKGDLDGRQLHS-----LSVKSTLRSNICVANSILDMYGKCEA 428
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ EA M +M D W+ ++ +GN E
Sbjct: 429 LSEACCMFDEMER-RDAVSWNAVIAAHEQNGNEE 461
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 184/402 (45%), Gaps = 40/402 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +L IF+ IP + ++ II + + LF +M+ V I + + R+
Sbjct: 227 LDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRS 286
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + +H+ LK F D+ V + +
Sbjct: 287 CAGLSALKVGTQLHAHALKCDFGSDITVGTATL--------------------------- 319
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
D Y K G LA A+++F+ +P + ++ G ++++ EA+Q F ++ +
Sbjct: 320 ----DMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLG 375
Query: 241 PDNIALVSALSACARL-GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ I+L A SACA + G+L+ G+ +H + +R + ++ ++D Y KC ++ A
Sbjct: 376 FNEISLSGAFSACASIKGDLD-GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACC 434
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ + ++ +WNA++ +G +L F+ M+ R++PD T L CS
Sbjct: 435 MFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQA 494
Query: 360 VDEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
++ ++ + ++S G+ + G + D+ + G+IEEA ++ ++ V W+ +
Sbjct: 495 LNSGMEIHNRIIKSGLGLDSFVG--GALIDMYCKCGMIEEAKKIHDRIEQQTMV-SWNAI 551
Query: 419 LGGCRIHGNVEIAEAAAEHVMKL--KPEDGGVYKVLADVYAN 458
+ G + + E A + ++K+ KP D Y ++ D AN
Sbjct: 552 IAGFTLLKHSEDAHSFFYEMLKMSVKP-DNFTYAIVLDACAN 592
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 255/487 (52%), Gaps = 28/487 (5%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTF-KPISSASSPTTDPLSYALSIFNNIPYPST 76
+IH +GLL + H+ T +L A +P +A +F+ +P P
Sbjct: 32 EIHGLLFKEGLLH-AGAHLPTALLSAYAALGRP------------RHARDLFDEMPDPGL 78
Query: 77 FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA------ 130
S + RAH A+ +F M + PD + L AC S A
Sbjct: 79 VSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAAGMAAAR 138
Query: 131 ---QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+ +H+ ++ G + DVFV L+ VY + L ++ LFD + R VS N ++ Y
Sbjct: 139 RPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQY 198
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---IKPDNI 244
++ ++ A +LF MP RD VSW T++AGY+ + EA++L M+ + P+
Sbjct: 199 IRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNGP 258
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+ + L+ACA G LE G +H +++ N++ D L L+D Y KCG I A+++FE +
Sbjct: 259 TMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEKA 318
Query: 305 QE-KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
E ++L++W M+ GLAMHG +L F M + I PD VT++G L C+H GLVDE
Sbjct: 319 PEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACAHCGLVDEG 378
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F +E Y ++ +++HYGC+ DLLGR G ++EA +I+ M M + +W L C+
Sbjct: 379 LRHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVIWGAFLNACK 437
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H NVE+ E AA + +L P D +L+ +YA W + + RR ++ +IKK GC
Sbjct: 438 VHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREMNNLQIKKTPGC 497
Query: 484 SLIQLNG 490
S I+L+G
Sbjct: 498 SSIELDG 504
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/476 (32%), Positives = 258/476 (54%), Gaps = 46/476 (9%)
Query: 18 QIHAHFLTKGLLFLSPCHILTT--ILYAITTFKPISSASSPTTDPLSYALSIFNNI-PYP 74
Q+HA L + ++P H L +L+ + K PL YA+++ + + P P
Sbjct: 39 QLHARAL-RAAPGVTPSHPLLAKHLLFHLAALK---------APPLRYAVAVLSGLLPSP 88
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
FS NT++R +F+S V + R PPD +++P LL+AC++L + + +H
Sbjct: 89 DPFSLNTVLR---IFASSARPRVALALHRRHLAPPDTHTYPPLLQACARLLALRYGEGLH 145
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
++ K G + VFV NSL+H+Y A +FDEI
Sbjct: 146 AEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEI---------------------- 183
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
P R+ VSW +++ G+A + + E + +F M++++ PD +VS L+ACA
Sbjct: 184 -------PPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACA 236
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF-ESSQEKNLFTWN 313
+G L G+ +H ++ + ++ L+D YAKCG ++ A ++F E + + +W
Sbjct: 237 EIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWT 296
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+++VGLA++G G +L FS M ++ P +T++G L CSH GLVD+ + FD+M++
Sbjct: 297 SLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAE 356
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG++ ++H GCM DLLGRAG +EEA I MP+ + VW LLG C +H +EI EA
Sbjct: 357 YGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEA 416
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
A +++L P G Y +L+++YA RW DV +R+++ ++KN G SL++L
Sbjct: 417 AWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELR 472
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 233/436 (53%), Gaps = 35/436 (8%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHT---LFSSPLNAVVLFSQMRTVSIPPDFYSFP 115
DPL AL + ++P F NT+IRAH + S L A F M ++ P+ ++FP
Sbjct: 73 DPLVTAL-LRPSVPL-DAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFP 130
Query: 116 FLLRACSQL-CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
FLL+AC+ L S + H+ LK GF D +V N+L+H+Y F
Sbjct: 131 FLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCF--------------- 175
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
G L AR +FDRMP AV+W ++ GY + +A+ LF M
Sbjct: 176 --------------GGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREM 221
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
++ D + ++ L+A LG LE + + R++E I L L+D AKCG +
Sbjct: 222 QANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDV 281
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+ A+ +FE Q++++ +W +++ LAM G G+ ++ F M A + PD V +G L C
Sbjct: 282 DGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTAC 341
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
SHAG+VDE FD M+ YG+ +++HYGCM D+ GRAG++E A+E ++ MP+ + +
Sbjct: 342 SHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVI 401
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W L+ CR HG +E+ E+ ++ P Y +L++V+A RW++ +IRR +
Sbjct: 402 WRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSK 461
Query: 475 GKIKKNAGCSLIQLNG 490
IKK GCS+++L+G
Sbjct: 462 RGIKKVPGCSIVELDG 477
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/484 (32%), Positives = 250/484 (51%), Gaps = 54/484 (11%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C ++K + QI H G L L C ASSP + L++A + +
Sbjct: 679 CSSMKHLFQIRGHGFIAGPL-LRFC------------------ASSPLGN-LNHARVLLS 718
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
S+N +IR++ SP A+ + +MR++ I PD +FP LL+AC+ + + +
Sbjct: 719 GSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAAISAFNE 778
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ I V+K G C+V+V N+++H Y R+RDA+ +FDE+ YR V
Sbjct: 779 GRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTV------------ 826
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
VSW +++ ++ ++ LF M PD +V
Sbjct: 827 -------------------VSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVIL 867
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSAC+ LG L G+ +H + + V+ L T LVD YAKCG + A +F E+N+
Sbjct: 868 LSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNV 927
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+TW+AM++GLA HG + +L F +M ++ I P+ VT LG L CSHAGLVD+ + F +
Sbjct: 928 WTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHD 987
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG--- 426
ME V+G+ + HYG M D+L RAG ++EA I MP+ D VW LL C IHG
Sbjct: 988 MEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGIND 1047
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N + + + +++L+P G + ++A++YA +W+ +RR++ +KK AG S I
Sbjct: 1048 NDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCI 1107
Query: 487 QLNG 490
++ G
Sbjct: 1108 EVGG 1111
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 253/436 (58%), Gaps = 12/436 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLR 119
L A F+ +P S S+N ++ + +P + LF+ M + ++ PD ++ ++
Sbjct: 144 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVIS 203
Query: 120 ACSQLCSHSLAQTIHSQVL-KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI---LYR 175
+CS L L+++I ++ K+GF + FV +L+ ++ L A ++F+++ YR
Sbjct: 204 SCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYR 263
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
V N +I Y + GDL A+ LFD+MP RD VSW +++AGY Q+ + +AI+LF M+
Sbjct: 264 SSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMI 323
Query: 236 DLD--IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
+ KPD + +VS SAC LGEL G +++N I++ + L++ Y++CG
Sbjct: 324 SSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGS 383
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A+ IF+ ++L ++N ++ G A HG G S+ S+M E I+PD +T + L
Sbjct: 384 MQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTA 443
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSHAGL+DE ++LF+ ++ ++ HY CM D+LGRAG +EEA+++I+ MPM
Sbjct: 444 CSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAG 498
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
++ LL IH VE+ E AA + K++P + G Y +L+++YA+A RW++ K+R ++
Sbjct: 499 IYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMR 558
Query: 474 AGKIKKNAGCSLIQLN 489
+KK G S ++ N
Sbjct: 559 KQGVKKTTGLSWLEHN 574
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 190/425 (44%), Gaps = 85/425 (20%)
Query: 96 VVLFSQM-RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
V LF M + I P+ + ++++ S S+ H VLK G+ D +V N ++
Sbjct: 16 VSLFKHMLQHCDIKPNASFYSVMMKSAG---SESMLFLAH--VLKSGYDRDHYVRNGILG 70
Query: 155 VYCVFHRLRDAQELFDEI-----------------------------------LYRDVVS 179
+Y + + A++LFDE+ + R+V++
Sbjct: 71 IYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVIT 130
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-D 238
T+I G+ K G+L AR FD+MP R VSW +++GYAQ EE I+LF +M+ +
Sbjct: 131 WTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN 190
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTA 297
++PD + +S+C+ LG+ ++I R ++ R + F+ T L+D +AKCG + A
Sbjct: 191 VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAA 250
Query: 298 IEIFES-------------------------SQEKNLF---------TWNAMLVGLAMHG 323
+IFE K+LF +WN+M+ G +G
Sbjct: 251 HKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNG 310
Query: 324 LGRLSLVYFSRMI--EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
++ F MI E KPD VT++ C H G + ++ V + +
Sbjct: 311 ESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILK-VNHIQISIS 369
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL 441
Y + ++ R G +++A+ + ++M D+ ++ L+ G HG+ + E + K+
Sbjct: 370 VYNSLINMYSRCGSMQDAVLIFQEMAT-RDLVSYNTLISGFAEHGH---GMESIELLSKM 425
Query: 442 KPEDG 446
K EDG
Sbjct: 426 K-EDG 429
>gi|15228026|ref|NP_181211.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216191|sp|Q9ZQA1.1|PP188_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36730
gi|4415918|gb|AAD20149.1| hypothetical protein [Arabidopsis thaliana]
gi|330254198|gb|AEC09292.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 501
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/489 (34%), Positives = 263/489 (53%), Gaps = 48/489 (9%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
F+K C +IK + QIH G + LS L + I+ +SS S + L
Sbjct: 19 FLKLCSSIKHLLQIH------GQIHLSS---LQNDSFIISELVRVSSLSLAKDLAFARTL 69
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+ ++ PST +N + R ++ SP+ ++ ++S+M+ I P+ +FPFLL+AC+
Sbjct: 70 LLHSSDSTPST--WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFL 127
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + I +VLK GF DV+V N+L+H+Y + DA+++FDE+ R+VVS N+++
Sbjct: 128 GLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMT 187
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
V+ G L LV + FC M+ PD
Sbjct: 188 ALVENGKL-------------------NLV------------FECFCEMIGKRFCPDETT 216
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V LSAC G L GK +H + + ++ ++ L T LVD YAK G + A +FE
Sbjct: 217 MVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMV 274
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEAR 364
+KN++TW+AM+VGLA +G +L FS+M+ E+ ++P+ VT LG L CSH GLVD+
Sbjct: 275 DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
K F EME ++ + + HYG M D+LGRAG + EA + IKKMP D VW LL C I
Sbjct: 335 KYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSI 394
Query: 425 HGNVE---IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
H + + I E + +++L+P+ G ++A+ +A A W + ++RR + K+KK A
Sbjct: 395 HHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIA 454
Query: 482 GCSLIQLNG 490
G S ++L G
Sbjct: 455 GESCLELGG 463
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 235/433 (54%), Gaps = 18/433 (4%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P S+NT+I + A LF + S D +++ ++
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE----SPTRDVFTWTAMVSG 275
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
Q A+T ++ + + N+++ Y ++ A+ELF+ + R++ S
Sbjct: 276 YVQNGMLDEAKTFFDEMPEKNEVS----YNAMIAGYVQTKKMDIARELFESMPCRNISSW 331
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT+I GY + GD+A AR+ FD MP RD VSW ++AGYAQS EEA+ +F ++IK
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF-----VEIK 386
Query: 241 PDNIALVSA-----LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
D +L A LS CA + LE GK IH F+ L+ Y KCG I+
Sbjct: 387 QDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSID 446
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A + FE +EK++ +WN ML G A HG GR +L F M A +KPD +T++G L CS
Sbjct: 447 EANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACS 506
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GL+D + F M YGV KHY CM DLLGRAG +EEA ++I+ MP W
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LLG RIHGN E+ E AAE V K++P++ G+Y +L+++YA + RW D K+R +
Sbjct: 567 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDI 626
Query: 476 KIKKNAGCSLIQL 488
++K G S +++
Sbjct: 627 GVQKVPGYSWVEV 639
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 165/369 (44%), Gaps = 59/369 (15%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN-AVVLFSQMRTVSIPPDFYSFPFLLRACS 122
AL +FN +P S+ SYN +I + L +S N A LF QM P+
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGY-LRNSKFNLARNLFDQM------PER----------- 109
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
D+F N ++ Y RL DA+ LFD + +DVVS N+
Sbjct: 110 ----------------------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS 147
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+ GY + G + AR++FD MP ++++SW L+A Y + + EEA LF + D D+
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISW 207
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
N L+ +LG+ R++ D+ ++ YA+ G ++ A +F+
Sbjct: 208 N-CLMGGFVRKKKLGDA-------RWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD 259
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
S +++FTW AM+ G +G+ + +F M E + V+ + G +D
Sbjct: 260 ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDI 315
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
AR+LF+ M + + + M G+ G I +A + MP D W+ ++ G
Sbjct: 316 ARELFESMP-----CRNISSWNTMITGYGQIGDIAQARKFFDMMPQ-RDCVSWAAIIAGY 369
Query: 423 RIHGNVEIA 431
G+ E A
Sbjct: 370 AQSGHYEEA 378
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 22/288 (7%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+ N LM + +L DA+ LFD++ RD +S NT+I GY + G L+ AR+LFD P
Sbjct: 203 DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESP 262
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RD +W +V+GY Q+ +EA F M + + ++ + ++ + +++ +
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDIARE 318
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
+ + I + + TG Y + G I A + F+ +++ +W A++ G A G
Sbjct: 319 LFESMPCRNISSWNTMITG----YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGH 374
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH-Y 383
+L F IK DG ++ A GC+ + D A + + ++G + ++ +
Sbjct: 375 YEEALNMF-----VEIKQDGESLNRATFGCALSTCADIA--ALELGKQIHGQAVKMGYGT 427
Query: 384 GCMAD-----LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
GC + + G I+EA + + + DV W+ +L G HG
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEE-KDVVSWNTMLAGYARHG 474
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 17/96 (17%)
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+ GL+D + F M Y V+ KHY CM DLLGR +EE
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
LLG RIHGN E+ E AA+ K+ P++ G+ K+
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSGISKM 854
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 229/429 (53%), Gaps = 32/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA SIF I P TF +NT+IR + + NA+ L+ +M + D +++P L +A
Sbjct: 35 MDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKA 94
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L S IH + K G D+FV NSL
Sbjct: 95 CASLRSIEEGMQIHGYIFKRGLEGDLFVQNSL---------------------------- 126
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
I+ Y K G + + +F+ M RD SW ++A +A E + +F M +
Sbjct: 127 ---INMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSC 183
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ LVS LSAC LG L+ G+ H + N ++ + T L+D Y KCG I +
Sbjct: 184 RPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLS 243
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ +KN +++ M+ GLAMHG G +L FS M+E +KPD V LG L C+HAGL
Sbjct: 244 LFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGL 303
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDE + F+ M+ +G+ ++HYGC+ L+GRAG++ +ALE I+ MP+ + VW GLL
Sbjct: 304 VDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLL 363
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C+ H N+EI E AA+ + +L + G Y VL+++YA A RWEDV KIR + +
Sbjct: 364 SACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFTQ 423
Query: 480 NAGCSLIQL 488
G SL+Q+
Sbjct: 424 TPGFSLVQV 432
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G + +A +F ++ + T++ GY E A+ L+ M++ ++ DN +
Sbjct: 33 GSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALF 92
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
ACA L +E+G IH YI + D F+ L++ Y KCG I + +FE +++
Sbjct: 93 KACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVA 152
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEAR----- 364
+W+A++ A G+ L F M E +P+ ++ L C+H G +D R
Sbjct: 153 SWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVT 212
Query: 365 --KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ EM + S + D+ + G IE+ L + ++M + + +S ++ G
Sbjct: 213 LLRNIREMNVIVQTS--------LIDMYVKCGCIEKGLSLFQRM-VKKNQLSYSVMITGL 263
Query: 423 RIHGN-VEIAEAAAEHVMK-LKPED 445
+HG +E + ++ + + LKP+D
Sbjct: 264 AMHGRGMEALQVFSDMLEEGLKPDD 288
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 253/436 (58%), Gaps = 12/436 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLR 119
L A F+ +P S S+N ++ + +P + LF+ M + ++ PD ++ ++
Sbjct: 201 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVIS 260
Query: 120 ACSQLCSHSLAQTIHSQVL-KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI---LYR 175
+CS L L+++I ++ K+GF + FV +L+ ++ L A ++F+++ YR
Sbjct: 261 SCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYR 320
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
V N +I Y + GDL A+ LFD+MP RD VSW +++AGY Q+ + +AI+LF M+
Sbjct: 321 SSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMI 380
Query: 236 DLD--IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
+ KPD + +VS SAC LGEL G +++N I++ + L++ Y++CG
Sbjct: 381 SSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGS 440
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A+ IF+ ++L ++N ++ G A HG G S+ S+M E I+PD +T + L
Sbjct: 441 MQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTA 500
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSHAGL+DE ++LF+ ++ ++ HY CM D+LGRAG +EEA+++I+ MPM
Sbjct: 501 CSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAG 555
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
++ LL IH VE+ E AA + K++P + G Y +L+++YA+A RW++ K+R ++
Sbjct: 556 IYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMR 615
Query: 474 AGKIKKNAGCSLIQLN 489
+KK G S ++ N
Sbjct: 616 KQGVKKTTGLSWLEHN 631
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 203/462 (43%), Gaps = 86/462 (18%)
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVV-LFSQM-RTVSIPPDFYSFPFL 117
P SY IF+ +P + +++ ++ V LF M + I P+ + +
Sbjct: 36 PSSYTCHIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVM 95
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI----- 172
+++ S + + VLK G+ D +V N ++ +Y + + A++LFDE+
Sbjct: 96 MKSAG-----SESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTV 150
Query: 173 ------------------------------LYRDVVSCNTLIDGYVKAGDLAHARQLFDR 202
+ R+V++ T+I G+ K G+L AR FD+
Sbjct: 151 ADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDK 210
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPDNIALVSALSACARLGELEQ 261
MP R VSW +++GYAQ EE I+LF +M+ +++PD + +S+C+ LG+
Sbjct: 211 MPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCL 270
Query: 262 GKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAIEIFES----------------- 303
++I R ++ R + F+ T L+D +AKCG + A +IFE
Sbjct: 271 SESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMIS 330
Query: 304 --------SQEKNLF---------TWNAMLVGLAMHGLGRLSLVYFSRMI--EARIKPDG 344
K+LF +WN+M+ G +G ++ F MI E KPD
Sbjct: 331 AYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDE 390
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
VT++ C H G + ++ V + + Y + ++ R G +++A+ + +
Sbjct: 391 VTMVSVFSACGHLGELGLGNWAVSILK-VNHIQISISVYNSLINMYSRCGSMQDAVLIFQ 449
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDG 446
+M D+ ++ L+ G HG+ + E + K+K EDG
Sbjct: 450 EMAT-RDLVSYNTLISGFAEHGH---GMESIELLSKMK-EDG 486
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 235/433 (54%), Gaps = 18/433 (4%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P S+NT+I + A LF + S D +++ ++
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE----SPTRDVFTWTAMVSG 275
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
Q A+T ++ + + N+++ Y ++ A+ELF+ + R++ S
Sbjct: 276 YVQNGMLDEAKTFFDEMPEKNEVS----YNAMIAGYVQTKKMDIARELFESMPCRNISSW 331
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT+I GY + GD+A AR+ FD MP RD VSW ++AGYAQS EEA+ +F ++IK
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF-----VEIK 386
Query: 241 PDNIALVSA-----LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
D +L A LS CA + LE GK IH F+ L+ Y KCG I+
Sbjct: 387 QDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSID 446
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A + FE +EK++ +WN ML G A HG GR +L F M A +KPD +T++G L CS
Sbjct: 447 EANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACS 506
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GL+D + F M YGV KHY CM DLLGRAG +EEA ++I+ MP W
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LLG RIHGN E+ E AAE V K++P++ G+Y +L+++YA + RW D K+R +
Sbjct: 567 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDI 626
Query: 476 KIKKNAGCSLIQL 488
++K G S +++
Sbjct: 627 GVQKVPGYSWVEV 639
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 165/369 (44%), Gaps = 59/369 (15%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN-AVVLFSQMRTVSIPPDFYSFPFLLRACS 122
AL +FN +P S+ SYN +I + L +S N A LF QM P+
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGY-LRNSKFNLARNLFDQM------PER----------- 109
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
D+F N ++ Y RL DA+ LFD + +DVVS N+
Sbjct: 110 ----------------------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS 147
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+ GY + G + AR++FD MP ++++SW L+A Y + + EEA LF + D D+
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISW 207
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
N L+ +LG+ R++ D+ ++ YA+ G ++ A +F+
Sbjct: 208 N-CLMGGFVRKKKLGDA-------RWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD 259
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
S +++FTW AM+ G +G+ + +F M E + V+ + G +D
Sbjct: 260 ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDI 315
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
AR+LF+ M + + + M G+ G I +A + MP D W+ ++ G
Sbjct: 316 ARELFESMP-----CRNISSWNTMITGYGQIGDIAQARKFFDMMPQ-RDCVSWAAIIAGY 369
Query: 423 RIHGNVEIA 431
G+ E A
Sbjct: 370 AQSGHYEEA 378
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 22/288 (7%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+ N LM + +L DA+ LFD++ RD +S NT+I GY + G L+ AR+LFD P
Sbjct: 203 DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESP 262
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RD +W +V+GY Q+ +EA F M + + ++ + ++ + +++ +
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDIARE 318
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
+ + I + + TG Y + G I A + F+ +++ +W A++ G A G
Sbjct: 319 LFESMPCRNISSWNTMITG----YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGH 374
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH-Y 383
+L F IK DG ++ A GC+ + D A + + ++G + ++ +
Sbjct: 375 YEEALNMF-----VEIKQDGESLNRATFGCALSTCADIA--ALELGKQIHGQAVKMGYGT 427
Query: 384 GCMAD-----LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
GC + + G I+EA + + + DV W+ +L G HG
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEE-KDVVSWNTMLAGYARHG 474
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 257/488 (52%), Gaps = 12/488 (2%)
Query: 2 TLNNFIKRCKTIKQI-HQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
TL +K C T++ + H + AH + L F+ + +L+ F +SA S
Sbjct: 116 TLPFVLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLH----FH--ASAGS----- 164
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L + F + + S+NT+I + A LF +MR + D ++ LL A
Sbjct: 165 LRDSRRFFGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFA 224
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS + + + +H +L G D + N+L+ +Y L A FD + ++VV+
Sbjct: 225 CSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTW 284
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+++ K G + R F++MP R+ VSW +++ Y Q + E + L+ M L I
Sbjct: 285 TSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGIT 344
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD L LSAC + G+L GK IH Y+ N L L+D YA+CG ++TAI +
Sbjct: 345 PDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGL 404
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F KN+ +WN ++ LAMHG + ++ +F M+ PD +T +G L CSH GL+
Sbjct: 405 FTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLL 464
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ F+ M VY V E++HYGCM DLLGR G + +A+ +IK M + DV VW LLG
Sbjct: 465 EAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLG 524
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHGNVEI + + +++L+ GG++ ++ +++ ++WED+ K+R+ + KK+
Sbjct: 525 ACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKD 584
Query: 481 AGCSLIQL 488
G S I++
Sbjct: 585 MGVSSIEV 592
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 206/455 (45%), Gaps = 71/455 (15%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+++C++I+ + QIHAH + G F + + ++ + T ++ L +A
Sbjct: 16 LLRQCRSIQHLDQIHAHLVVHG--FSDVSSVASQLIASYCTL-----SAGDRDGGLCHAR 68
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ IP P F YNT++RA++ P A+ L + I P+ ++ PF+L+AC+ +
Sbjct: 69 RLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVR 128
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ A H V+KLGF+ +FV N+L+H + LRD++ F E+ R+VVS NT+I
Sbjct: 129 AVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIG 188
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY +AG+++ EA LF M + D
Sbjct: 189 GYAQAGEVS-------------------------------EACALFGEMRHQGLLADVFT 217
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LVS L AC+ G LE G+ +H ++ ++ RVD L L+D Y KCG + A F+
Sbjct: 218 LVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMP 277
Query: 306 EKNLFTWNAMLVGLAMHG-----------------------------LGRL--SLVYFSR 334
KN+ TW +ML A HG GRL +L ++R
Sbjct: 278 IKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNR 337
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M I PD T+ G L C G + + + + + + + D+ R G
Sbjct: 338 MRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFN-DPGVTLLNSLLDMYARCG 396
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
++ A+ + +MP +V W+ ++G +HG +
Sbjct: 397 QVDTAIGLFTEMP-NKNVISWNVIIGALAMHGRAQ 430
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 240/426 (56%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + S+ ++ ++ + A++ F++M+ + D +L AC
Sbjct: 124 ARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACGH 183
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ ++IHS +L + + + ++L+++Y + A++L++ + +D+VS +
Sbjct: 184 IRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAM 243
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY + AR +FD MP +D VSW +++GYA S+Q EA+ LF +M + I+PD
Sbjct: 244 VFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDE 303
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++S +SACA LG L++ K IH +I+ N + + L+D +AKCG IN A+ IF
Sbjct: 304 VTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNE 363
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+KN+ TW +M+ AMHG G+ +L F +M ++P+ VT L L C HAGLV E
Sbjct: 364 MPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEG 423
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R LF M YG+ + +HYGCM DLLGRA L++EA+ +I+ M + +V VW LL C
Sbjct: 424 RSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACW 483
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+HG++++ AA+ +++L P G +L+ +Y +D D ++R + + K G
Sbjct: 484 MHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVMKLQGVSKETGL 543
Query: 484 SLIQLN 489
S + LN
Sbjct: 544 SWMDLN 549
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 180/402 (44%), Gaps = 74/402 (18%)
Query: 69 NNIPYPSTF------SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDF-YSFPFLLRAC 121
+ IP P T +Y IRA ++P + + +R +PP + P LLR+
Sbjct: 22 HQIPSPPTTHLDPDRAYLATIRAAA--TTPRLVLAACACLRRTGLPPPGPRALPALLRSA 79
Query: 122 SQ-LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ + + + + H+ ++G + D FV +L
Sbjct: 80 ARCVGAGAYVRGAHALAFRVGSLDDGFVRTAL---------------------------- 111
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ Y G + AR++FD M RD VSWG ++ Y Q+ +EA+ F M + +
Sbjct: 112 ---VGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVL 168
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE- 299
D + L + LSAC + L GK+IH Y+ ++ I +++ LS+ L++ YA C + A +
Sbjct: 169 SDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKL 228
Query: 300 ------------------------------IFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
IF+ EK++ +W+AM+ G A +L
Sbjct: 229 YNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEAL 288
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F+ M E I+PD VT+L + C++ G +D+A+ + +++ G++K L + D+
Sbjct: 289 SLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKN-NGLNKILHICNALIDM 347
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G I AL + +MP +V W+ ++ +HG+ + A
Sbjct: 348 FAKCGGINLALNIFNEMPQ-KNVITWTSMITAFAMHGDGKSA 388
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ AL+IFN +P + ++ ++I A + +A+ LF QMR + P+ +F LL A
Sbjct: 354 INLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYA 413
Query: 121 C 121
C
Sbjct: 414 C 414
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 229/425 (53%), Gaps = 1/425 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ F++ +I A+ +FS MR D ++ AC+Q
Sbjct: 219 ARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQ 278
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
Q H V++ G V V N+L+H+Y + A+ LFD D S N++
Sbjct: 279 SEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSM 338
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY+K G + A LF MP +D VSW T+++G Q++Q +A+ +F NM I+PD
Sbjct: 339 IAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDE 398
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +VS +SAC L LE+GK++H YI+ NQ V L T L++ Y KCG + A+E F
Sbjct: 399 VTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNI 458
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI-KPDGVTILGALVGCSHAGLVDE 362
+EK WNA++VGLAM+GL SL FS M + P+ +T G L C HAGLVDE
Sbjct: 459 MEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACRHAGLVDE 518
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R F M+ Y + ++HYGCM DLLGRAG ++EA +MI+ MPM DV W LLG C
Sbjct: 519 GRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGAC 578
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
HG E+ E ++ P G +L+++YA W+ V +R S+ ++K +G
Sbjct: 579 WKHGEYEVGERVGRKLVNRDPLHDGFQTMLSNIYAKEGMWQSVDDLRGSMKQRHVQKVSG 638
Query: 483 CSLIQ 487
S+++
Sbjct: 639 HSVVK 643
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 182/401 (45%), Gaps = 47/401 (11%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L+ + RC + + + QIHA F+ GLL +A + +SAS P
Sbjct: 7 LDAHLARCCSARHLLQIHAQFIASGLL---------ADAFAASRLLLFTSASRLLPLPFH 57
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
++L + + YP+ FS NT++++ + P + L++ ++ PPD Y+ P L AC+
Sbjct: 58 HSLRLLRLVRYPNAFSCNTLLKSALIGGMPHLCLPLYA---SLPAPPDSYTHPILAAACA 114
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ +H+ + GF ++++ N+L+ +Y L DA+ +FD D VS NT
Sbjct: 115 SRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAVSWNT 174
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAV-------------------------------SW 211
++ YV AGD+ A ++F +MP R+A +W
Sbjct: 175 ILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTW 234
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
+++ + ++D EA+ +F M D +VS +SACA+ ++ G+ H +
Sbjct: 235 TAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIR 294
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
+ + L+ Y+ C + A +F+S + + ++WN+M+ G +G + ++
Sbjct: 295 AGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMAL 354
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
FS M D V+ + GC +A +FD M++
Sbjct: 355 FSAM----PNKDNVSWSTVISGCVQNNQSSDALTVFDNMQA 391
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 112/290 (38%), Gaps = 49/290 (16%)
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRL-----RDAQELFDEILYRD 176
++ CS IH+Q + G + D F + L+ ++ RL + L + Y +
Sbjct: 12 ARCCSARHLLQIHAQFIASGLLADAFAASRLL-LFTSASRLLPLPFHHSLRLLRLVRYPN 70
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
SCNTL+ + G L+ +P
Sbjct: 71 AFSCNTLLKSALIGGMPHLCLPLYASLP-------------------------------- 98
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
PD+ +ACA ++ +G+ +H + + + +L L+ Y+ CG +
Sbjct: 99 --APPDSYTHPILAAACASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWD 156
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A +F++ + +WN +L G ++ F++M + V+ + +L G
Sbjct: 157 ARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVEVFAQM--PKRNATAVSSMVSLFG--R 212
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
G+VDEAR++FD E +++ + M R + EAL + M
Sbjct: 213 RGMVDEARRVFDAAE-----CRDIFTWTAMISCFERNDMFAEALHVFSCM 257
>gi|297812081|ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319761|gb|EFH50183.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 939
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/415 (38%), Positives = 240/415 (57%), Gaps = 8/415 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ I S+ T+I + A+V +++M + P LL A
Sbjct: 509 IEQAKELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRRGMKPSEVMMVDLLSA 568
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ S +H ++K+GF C F+ +++H Y V + L+ A + F+ + + S
Sbjct: 569 SARSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAVSNNLKLALQQFEVSVKDHIASR 628
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DI 239
N LI G+VK G + AR++FD+ +D SW +++GYAQS + A+ LF M+ +
Sbjct: 629 NALIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSSQV 688
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD I +VS SA + LG LE+GK H Y+ + I + L +++ YAKCG I TA+
Sbjct: 689 KPDAITMVSVFSAISSLGSLEEGKRAHEYLNRSSIPPNDNLIAAIINMYAKCGSIETALN 748
Query: 300 IFESSQEKNLFT-----WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
IF Q KN+F+ WNA++ G A HG +L+L +S + IKP+ +T +G L C
Sbjct: 749 IFH--QTKNIFSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 806
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
HAGLV+ + F+ M+S +G+ ++KHYGCM DLLG++G +EEA EMIK MP+ DV +
Sbjct: 807 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKSGKLEEAKEMIKNMPVKADVMI 866
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
W LL RIHGNVEIAE AA + + P GG +L++VYA+A RWEDV +R
Sbjct: 867 WGMLLSASRIHGNVEIAELAAAELAAIDPSHGGCKVMLSNVYADAGRWEDVALVR 921
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 200/405 (49%), Gaps = 35/405 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L AL +F+ +P S SY T+I+ + + A+ LF +MR + I + + ++ A
Sbjct: 377 LGDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA 436
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L + +HS +KL VF +L+ +YC+ L+DA++LFDE+ R++V+
Sbjct: 437 CSHLGGIWDCKMLHSLAIKLNLDDRVFASTNLLLMYCICSCLKDARKLFDEMPERNLVTW 496
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +++GY KAG + A++LFD++ +D VSWGT++ G + +Q +EA+ + M+ +K
Sbjct: 497 NVMLNGYSKAGLIEQAKELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRRGMK 556
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA----------- 289
P + +V LSA AR +G +H I FL ++ FYA
Sbjct: 557 PSEVMMVDLLSASARSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAVSNNLKLALQQ 616
Query: 290 --------------------KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
K G + A E+F+ +++K++F+WNAM+ G A +L+L
Sbjct: 617 FEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGYAQSLSPQLAL 676
Query: 330 VYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
F MI +++KPD +T++ S G ++E ++ + + + + +
Sbjct: 677 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHEYLNR-SSIPPNDNLIAAIIN 735
Query: 389 LLGRAGLIEEALEMI--KKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + G IE AL + K + W+ ++ G HG+ ++A
Sbjct: 736 MYAKCGSIETALNIFHQTKNIFSSTISPWNAIICGSATHGHAKLA 780
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 142/284 (50%), Gaps = 27/284 (9%)
Query: 108 PPDFYSFPFL-------------------LRACSQLCSHSLAQTIHSQVLKLGFICDVFV 148
P ++SFP L L +C+ + + IH +VLK G + F+
Sbjct: 273 PARYFSFPSLTHFDFSGESSNIERALVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFI 332
Query: 149 LNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA 208
NS++++Y L DA+ +F D S N ++DGY ++ L A +LFD MP R
Sbjct: 333 CNSVLNMYAKCRLLVDAESVFRAHAKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSC 392
Query: 209 VSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRY 268
VS+ TL+ GYAQ++Q EA++LF M +L I + + L + +SAC+ LG + K +H
Sbjct: 393 VSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCKMLHSL 452
Query: 269 -IELN-QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
I+LN RV F ST L+ Y C + A ++F+ E+NL TWN ML G + GL
Sbjct: 453 AIKLNLDDRV--FASTNLLLMYCICSCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIE 510
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+ F ++ E I G I GC +DEA + EM
Sbjct: 511 QAKELFDQITEKDIVSWGTMI----DGCLRKNQLDEALVYYTEM 550
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 72/244 (29%)
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC------------- 291
ALVSAL +CA ++ G+ IH + + + F+ +++ YAKC
Sbjct: 297 ALVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFRAH 356
Query: 292 -------------GY-----INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
GY + A+++F+ E++ ++ ++ G A + ++ F
Sbjct: 357 AKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 416
Query: 334 RMIEARIKPDGVTILGALVGCSHAG----------------------------------- 358
M I + VT+ + CSH G
Sbjct: 417 EMRNLGIMLNEVTLATVISACSHLGGIWDCKMLHSLAIKLNLDDRVFASTNLLLMYCICS 476
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+ +ARKLFDEM + L + M + +AGLIE+A E+ ++ D+ W +
Sbjct: 477 CLKDARKLFDEMP-----ERNLVTWNVMLNGYSKAGLIEQAKELFDQI-TEKDIVSWGTM 530
Query: 419 LGGC 422
+ GC
Sbjct: 531 IDGC 534
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 250/446 (56%), Gaps = 2/446 (0%)
Query: 44 ITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR 103
+ ++ I A T D L A IF+ +P + S++ +I ++ A+ LFS+M
Sbjct: 250 VVSWTAILDAYVETGD-LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 104 TVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR 163
P+ F L A + L + S IH V K+G DVF+ +SL+ +YC +
Sbjct: 309 QEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPD 368
Query: 164 DAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQ 223
D + +FD IL ++VV N+++ GY G L +LF+ +P ++ VSWGT++AGY +++Q
Sbjct: 369 DGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQ 428
Query: 224 CEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG 283
CE+ +++F ++ P+ S L ACA + L++G N+H I I+ D F+ T
Sbjct: 429 CEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTA 488
Query: 284 LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKP 342
L D YAKCG I ++ ++FE EKN +W M+ GLA G SL+ F M + + P
Sbjct: 489 LTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAP 548
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
+ + +L L CSH GLVD+ F+ ME VYG+ + KHY C+ DLL R+G + EA E
Sbjct: 549 NELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEF 608
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRW 462
I+ +P + W+ LL GC+ + + +IAE A+ + +L + Y +L+++YA+A RW
Sbjct: 609 IRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRW 668
Query: 463 EDVVKIRRSLDAGKIKKNAGCSLIQL 488
DV IR+ + +KK+ GCS +++
Sbjct: 669 IDVSNIRKLMREKGLKKSGGCSWVEV 694
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI-- 67
C+ +I QI F L+ +S C I + + + P + +S++ I
Sbjct: 69 CRKFAEIDQIVKEFDGSDLV-VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISG 127
Query: 68 -------------FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
F P+ + S+ I A+ LF ++ + P+ +F
Sbjct: 128 LMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTF 187
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
++RAC +L L +I V+K GF + V NSL+ + + A+ +FD +
Sbjct: 188 TSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEK 247
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS ++D YV+ GDL AR++FD MP R+ +SW ++A Y+QS EEA++LF M
Sbjct: 248 RDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKM 307
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ KP+ LSA A L L G NIH ++ I D F+ + L+D Y KCG
Sbjct: 308 VQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKP 367
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
+ +F+ EKN+ WN+M+ G +++G
Sbjct: 368 DDGRLVFDLILEKNVVCWNSMVGGYSING 396
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 143/313 (45%), Gaps = 33/313 (10%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+ V N ++ Y + L A+ LFDE+ R+ VS + LI G +K G + + F+R P
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
F++ VSW ++G+ ++ EA++LF +++ ++P+++ S + AC LG+ G +
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 265 I---------HRYIELNQI----------------------RVDSFLSTGLVDFYAKCGY 293
I Y+ ++ + D T ++D Y + G
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A IF+ E+N +W+AM+ + G +L FS+M++ KP+ L
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
+ + + + + G+ K++ + DL + G ++ ++ + + +V
Sbjct: 326 LASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVV 383
Query: 414 VWSGLLGGCRIHG 426
W+ ++GG I+G
Sbjct: 384 CWNSMVGGYSING 396
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 229/406 (56%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N++I + + L A+ LF+ MR + D+ +F +L ACS L +H+ V
Sbjct: 273 WNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVY 332
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
K+GF D+ + ++L+ +Y R DA +LF ++ D + N++I Y G + ARQ
Sbjct: 333 KVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQ 392
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+FD MP + +SW +++ G++Q+ EA+ LFC M L ++ D +L +SACA +
Sbjct: 393 IFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISS 452
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
LE G+ I + + D +ST LVDFY KCG + ++F+ + + WN+ML+G
Sbjct: 453 LELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMG 512
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
A +G G +L F +M ++P +T +G L C H GLV+E RK F M+ Y ++
Sbjct: 513 YATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINP 572
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
++HY CM DL RAGL+E+A+ +I++MP+ D +WS +L GC HGN + + A+ +
Sbjct: 573 GIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRI 632
Query: 439 MKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
+ L PE+ G Y L+ +YA + W ++R+ + KI K GCS
Sbjct: 633 IDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKVPGCS 678
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 186/403 (46%), Gaps = 58/403 (14%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVL-NSLMHVYCVFHRLRDAQEL 168
D +S L +C+ S + +H LK G + V + N L+ +Y + +R+AQ+L
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQL 64
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
F+E+ R+ S NT+I+GY+K+G + +LFD MP +DA SW +++G+A+ E A
Sbjct: 65 FEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVAR 124
Query: 229 QLF-------------------CN---------MMDLDIKP------DNIALVSALSACA 254
+LF CN DL + P D L + + AC
Sbjct: 125 RLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACT 184
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
LG L+ GK IH I ++++ DS L + LV+ Y KCG I++A + +E + F+ +A
Sbjct: 185 NLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSA 244
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEAR----IKPDGVTIL--GALVGCSHAGLVDEARKLFD 368
++ G A G RM +AR +K + +L + G EA +LF+
Sbjct: 245 LISGYASCG----------RMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFN 294
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEM---IKKMPMGGDVFVWSGLLGGCRIH 425
M GV ++ + + G+I++ +++ + K+ D+ + S L+ ++
Sbjct: 295 NMRR-KGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVD---MY 350
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
+ A + L+ D + + VY+N R +D +I
Sbjct: 351 SKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQI 393
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 185/404 (45%), Gaps = 42/404 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP------DFYSF 114
L A +FN +P+ + ++N++I + P AV LF + +S+ P D +
Sbjct: 120 LEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLF---KDLSLNPLERFCGDTFVL 176
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
++ AC+ L + + IH++++ D + +SL+++Y + A + + +
Sbjct: 177 ATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKE 236
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
D S + LI GY G + AR++F V W ++++GY +++ EA++LF NM
Sbjct: 237 PDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNM 296
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK---- 290
++ D S LSAC+ LG ++QG +H ++ D + + LVD Y+K
Sbjct: 297 RRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRP 356
Query: 291 ---------------------------CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
CG I+ A +IF++ K+L +WN+M+VG + +
Sbjct: 357 DDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNA 416
Query: 324 LGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
+L F M + ++ D ++ G + C+ ++ ++F ++ G+ +
Sbjct: 417 CPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFAR-ATIIGLEFDQIIS 475
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ D + GL+E ++ +M M D W+ +L G +G+
Sbjct: 476 TSLVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 518
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 35/308 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ +P S S+N++I + + P+ A+ LF +M + + D +S ++ AC+
Sbjct: 390 ARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACAS 449
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S L + I ++ +G D + SL+ YC + ++LFD ++ D V N++
Sbjct: 450 ISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSM 509
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY G A +FD+ M + ++P +
Sbjct: 510 LMGYATNGHGIEALNVFDQ-------------------------------MRSVGVQPTD 538
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
I V LSAC G +E+G+ ++L+ I + +VD YA+ G + A+ + E
Sbjct: 539 ITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIE 598
Query: 303 SSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG--VTILGALVGCSHAGL 359
K + W+++L G HG L R+I+ + G V + G G
Sbjct: 599 QMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGR 658
Query: 360 VDEARKLF 367
+ RKL
Sbjct: 659 SAQVRKLM 666
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 240/434 (55%), Gaps = 12/434 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP---PDFYSFPFL 117
L A +F+ +P + SYN++I + A V+F IP + S+ L
Sbjct: 178 LVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFD-----CIPLEERNLISWNSL 232
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+R +Q L + Q+ D+ NS++ R+ DAQ LFD + RD+
Sbjct: 233 IRGYAQSEDGIL---VAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDI 289
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-D 236
VS +IDGY K G + AR LFD MP RD V++ ++ GY Q+ C EA+ +F M D
Sbjct: 290 VSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSD 349
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+ DN L+ ALSA A+LG +++G IHR+IE +D L L+D Y+KCG I
Sbjct: 350 GNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIEN 409
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A+ +FE+ +EK++ WNA++ GLA+HGLG L+ + M R++PD +T +G L C H
Sbjct: 410 AMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGH 469
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AGLV E F+ M V+ V +L+HYGCM D+LGRAG IEEA +++MP + +W
Sbjct: 470 AGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWR 529
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C+ H + + + AE++M+L Y + +++YA +W DV K+R +
Sbjct: 530 SLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKN 589
Query: 477 IKKNAGCSLIQLNG 490
+KK GCS I+L G
Sbjct: 590 LKKIPGCSWIELEG 603
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 218/457 (47%), Gaps = 37/457 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+K+CK + I+QIHA LT G F+ + T I+ + +T S +P + +A
Sbjct: 21 LLKKCKRLSDINQIHARLLTTG--FIKNTFLTTKIILSFST-----SLHAPL---IEFAR 70
Query: 66 SIF-----------NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
IF F +N II+ ++ P A+ L S M D ++
Sbjct: 71 FIFFRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTL 130
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
+L+ACS++ IH + KL F D+F+ N L+ Y L A ++FD +
Sbjct: 131 SLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPK 190
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQS-DQCEEAIQLF 231
RD VS N++IDGYVK G + AR +FD +P R+ +SW +L+ GYAQS D A QLF
Sbjct: 191 RDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLF 250
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M + D+ I+ S + C + G +E + + + D ++D YAK
Sbjct: 251 AKMPERDL----ISWNSMIDGCVKCGRMEDAQGLFDRMP----NRDIVSWANMIDGYAKN 302
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL-VYFSRMIEARIKPDGVTILGA 350
G ++ A +F+ E+++ +NAM+ G +G +L +++ + D T+L A
Sbjct: 303 GRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIA 362
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
L + G +D+ + +E + G S + + + D+ + G IE A+ + + +
Sbjct: 363 LSAIAQLGHIDKGVAIHRFIEEI-GFSLDGRLGVALIDMYSKCGSIENAMMVFENIK-EK 420
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHV--MKLKPED 445
V W+ ++GG IHG E+A + M+++P+D
Sbjct: 421 SVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDD 457
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/315 (42%), Positives = 200/315 (63%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
DV + L+D Y K G A ++F+ MP R+ VSWG L+AGY Q ++ +EA+++F M+
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
I+P+ + SAL+ACA+LG L+QG+ +H Y++ +++ ++S L T LVD Y+KCG ++
Sbjct: 299 IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVD 358
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+ +FE K+++ W AM+ GLAM G SL FS+MI +R++P+GVT LG L C+
Sbjct: 359 EALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA 418
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H GLVDE +LF M Y + + HYGCM DLLGRAG +EEA++ I+ MPM VW
Sbjct: 419 HGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVW 478
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
L GC IH E+ E H++KL+P G Y +LA++Y+ +WE +RR +
Sbjct: 479 GALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGK 538
Query: 476 KIKKNAGCSLIQLNG 490
+ K+ CS I++NG
Sbjct: 539 GVDKSPACSWIEVNG 553
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 207/421 (49%), Gaps = 52/421 (12%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C T ++Q + +T GL A TF S T D L Y L +F
Sbjct: 17 KCGTFDHLNQTTSILITSGL--------------AHHTFFLSDLLRSATKD-LGYTLLLF 61
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ + P F +NTI+R+ + S P +V +S++R + PD ++FP LL+A S+L + +
Sbjct: 62 DRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNEN 121
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
Q ++ ++K G D FV NSL+ + C GYV
Sbjct: 122 PFQ-FYAHIVKFGLDFDAFVQNSLVSAF---------------------AHC-----GYV 154
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+R+LF +D VSW L+ G ++ + EA++ F M ++ D + +VS
Sbjct: 155 DC-----SRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVS 209
Query: 249 ALSACARLGELEQGKNIHR-YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
L A A L ++ G+ +H Y+E ++ D ++ + LVD Y+KCGY + A+++F +
Sbjct: 210 VLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR 269
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
NL +W A++ G + +L F MI I+P+ T+ AL C+ G +D+ R L
Sbjct: 270 NLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLH 329
Query: 368 DEME-SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ ++ S G++ +L + D+ + G ++EAL + +K+P DV+ W+ ++ G + G
Sbjct: 330 EYVDRSKLGLNSKLG--TALVDMYSKCGCVDEALLVFEKLP-AKDVYPWTAMINGLAMRG 386
Query: 427 N 427
+
Sbjct: 387 D 387
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 254/486 (52%), Gaps = 43/486 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +K+C +++ Q HA L GL S C + L A S + YA
Sbjct: 36 SLLKKCSNMEEFKQSHARILKLGLFGDSFC---ASNLVATCALSDWGS--------MDYA 84
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SIF + +F +NT++R H + A++ + +M + PD +++P LL+AC++L
Sbjct: 85 CSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARL 144
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ +H+ +LKLG DVFV NSL I
Sbjct: 145 PAVEEGMQVHAHILKLGLENDVFVQNSL-------------------------------I 173
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI-KPDN 243
Y K G++ +F++M R SW L+ +A + ++L +M + + +
Sbjct: 174 SMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEE 233
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
LVS LSAC LG L+ G+++H ++ N ++ + T L++ Y KCG + + +F+
Sbjct: 234 SILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQK 293
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+KN +++ M+ GLAMHG GR L F+ M+E ++PD + +G L CSHAGLV E
Sbjct: 294 MAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEG 353
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F+ M+ +G+ ++HYGCM DL+GRAG I+EALE+IK MPM + +W LL +
Sbjct: 354 LQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASK 413
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H N++ E AA+ + KL + Y VL+++YA A RWEDV K R ++ + + + G
Sbjct: 414 VHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGF 473
Query: 484 SLIQLN 489
SL+++
Sbjct: 474 SLVEVK 479
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 244/432 (56%), Gaps = 1/432 (0%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
T L A IF+ +P + S++ +I ++ A+ LFS+M P+ F
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L A + L + S IH V K+G DVF+ +SL+ +YC + D + +FD IL ++V
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V N+++ GY G L +LF+ +P ++ VSWGT++AGY +++QCE+ +++F ++
Sbjct: 383 VCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVS 442
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
P+ S L ACA + L++G N+H I I+ D F+ T L D YAKCG I ++
Sbjct: 443 GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSS 502
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSH 356
++FE EKN +W M+ GLA G SL+ F M + + P+ + +L L CSH
Sbjct: 503 KQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSH 562
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
GLVD+ F+ ME VYG+ + KHY C+ DLL R+G + EA E I+ +P + W+
Sbjct: 563 CGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWA 622
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL GC+ + + +IAE A+ + +L + Y +L+++YA+A RW DV IR+ +
Sbjct: 623 ALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKG 682
Query: 477 IKKNAGCSLIQL 488
+KK+ GCS +++
Sbjct: 683 LKKSGGCSWVEV 694
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 33/385 (8%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F P+ + S+ I A+ LF ++ + P+ +F ++RAC +L
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L +I V+K GF + V NSL+ + + A+ +FD + RDVVS ++D Y
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
V+ GDL AR++FD MP R+ +SW ++A Y+QS EEA++LF M+ KP+
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
LSA A L L G NIH ++ I D F+ + L+D Y KCG + +F+ EK
Sbjct: 321 CTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK 380
Query: 308 NLFTWNAMLVGLAMHG------------------------LGRLS-------LVYFSRMI 336
N+ WN+M+ G +++G G L L F+ ++
Sbjct: 381 NVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLL 440
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
+ P+ T L C+ +D+ + ++ + G+ ++ + D+ + G I
Sbjct: 441 VSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKL-GIQYDIFVGTALTDMYAKCGDI 499
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGG 421
+ ++ ++MP ++ W+ ++ G
Sbjct: 500 GSSKQVFERMPEKNEI-SWTVMIQG 523
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 33/322 (10%)
Query: 136 QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
Q++K D+ V N ++ Y + L A+ LFDE+ R+ VS + LI G +K G +
Sbjct: 77 QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
+ F+R PF++ VSW ++G+ ++ EA++LF +++ ++P+++ S + AC
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGE 196
Query: 256 LGELEQGKNI---------HRYIELNQI----------------------RVDSFLSTGL 284
LG+ G +I Y+ ++ + D T +
Sbjct: 197 LGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAI 256
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG 344
+D Y + G + A IF+ E+N +W+AM+ + G +L FS+M++ KP+
Sbjct: 257 LDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
L + + + + + G+ K++ + DL + G ++ ++
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVF 374
Query: 405 KMPMGGDVFVWSGLLGGCRIHG 426
+ + +V W+ ++GG I+G
Sbjct: 375 DLILEKNVVCWNSMVGGYSING 396
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 234/423 (55%), Gaps = 31/423 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F + + S+N II A + + ++M + PD +++ +L+AC+ L S
Sbjct: 395 VFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQS 454
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+H + +K G D FV +T++D
Sbjct: 455 LEYGSVVHGKAIKSGLGLDAFV-------------------------------SSTVVDM 483
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G + A++L DR+ ++ VSW ++++G++ + Q EEA + F M+D+ +KPD+
Sbjct: 484 YCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTY 543
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ L CA L +E GK IH I ++ D ++S+ LVD YAKCG + ++ +FE +Q+
Sbjct: 544 ATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQK 603
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+ +WNAM+ G A+HG G +L F RM +A + P+ T + L CSH GL+D+ +
Sbjct: 604 LDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRY 663
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M S Y + +L+H+ CM D+LGR+ +EAL+ I+ MP+ D +W LL C+I
Sbjct: 664 FYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQ 723
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+VE+AE AA +V++L P+D VY +L++VYA + +W DV + RR + G++KK GCS I
Sbjct: 724 DVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWI 783
Query: 487 QLN 489
++
Sbjct: 784 EVQ 786
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 163/370 (44%), Gaps = 33/370 (8%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
D L A F ++P + + N ++ A+ LF M I D S +
Sbjct: 285 ADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGV 344
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
AC+++ + +H +K GF DV V N+++ +Y
Sbjct: 345 FSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYG-------------------- 384
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
C L++ Y+ +F M RD+VSW ++A Q++ E+ I M+
Sbjct: 385 -KCKALVEAYL----------VFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRY 433
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++PD+ S L ACA L LE G +H + + +D+F+S+ +VD Y KCG I A
Sbjct: 434 GMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEA 493
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++ + + L +WN+++ G +++ + +FS M++ +KPD T L C++
Sbjct: 494 QKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANL 553
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
++ +++ ++ + E + D+ + G + ++L M +K D W+
Sbjct: 554 ATIELGKQIHGQIIKQEMLGDEYIS-STLVDMYAKCGNMPDSLLMFEK-AQKLDFVSWNA 611
Query: 418 LLGGCRIHGN 427
++ G +HG
Sbjct: 612 MICGYALHGQ 621
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 144/347 (41%), Gaps = 39/347 (11%)
Query: 113 SFPFLLRACSQLCSHSLA--QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
+F L + C+ +LA Q H+++L GF+ FV N L+ +Y A+ +FD
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 171 EILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
+ +RD VS NT++ Y AGD A LF MP D VSW L++GY Q +++ L
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
M + PD L L AC L +L G IH + +D + LVD Y K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMH----------------GLGRLSLVYFS- 333
C + A+ F E+N +W A + G + GLG Y S
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243
Query: 334 -------------RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKEL 380
R + A + + +VG + + +A L D + + +
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSA-DRVVGTAIVDVYAKADSLVDARRAFFSLPNHT 302
Query: 381 KHYGCMADLLG--RAGLIEEALEMIKKMPMGG---DVFVWSGLLGGC 422
C A ++G R GL EAL++ + M G DV SG+ C
Sbjct: 303 VQ-ACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSAC 348
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 123/293 (41%), Gaps = 31/293 (10%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A S+F +P P S+N ++ + ++V L +M + PD + LL+AC
Sbjct: 89 AASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGG 148
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L +L IH+ +K G L DV + + L
Sbjct: 149 LEDLALGVQIHAVAVKTG-------------------------------LEMDVRAGSAL 177
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K L A + F M R++VSWG +AG Q++Q ++LF M L +
Sbjct: 178 VDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQ 237
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
A S +CA + L + +H + N+ D + T +VD YAK + A F S
Sbjct: 238 PAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFS 297
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+ NAM+VGL GLG +L F M + I D V++ G C+
Sbjct: 298 LPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAE 350
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 166/401 (41%), Gaps = 38/401 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L AL F+ + ++ S+ I + LF QM+ + + ++ + R+
Sbjct: 187 LEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRS 246
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + S A+ +H+ +K F D V +++ VY L DA+ F + V +C
Sbjct: 247 CAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQAC 306
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ G V+ G A EA+QLF M I
Sbjct: 307 NAMMVGLVRTGLGA-------------------------------EALQLFQFMTRSGIG 335
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D ++L SACA + QG +H + VD + ++D Y KC + A +
Sbjct: 336 FDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLV 395
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++++ +WNA++ L + ++ Y + M+ ++PD T L C AGL
Sbjct: 396 FQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKAC--AGLQ 453
Query: 361 D-EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
E + G+ + + D+ + G+I EA ++ ++ G ++ W+ ++
Sbjct: 454 SLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIG-GQELVSWNSII 512
Query: 420 GGCRIHGNVEIAEAAAEHVMKL--KPEDGGVYKVLADVYAN 458
G ++ E A+ ++ + KP D Y + D AN
Sbjct: 513 SGFSLNKQSEEAQKFFSEMLDIGVKP-DHFTYATVLDTCAN 552
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 31/202 (15%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A + + I S+N+II +L A FS+M + + PD +++ +L
Sbjct: 490 ITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDT 549
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + L + IH Q++K + D ++ ++L+ +Y + D+ +F++ D VS
Sbjct: 550 CANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSW 609
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GY G Q EA+++F M ++
Sbjct: 610 NAMICGYALHG-------------------------------QGFEALEMFERMQQANVV 638
Query: 241 PDNIALVSALSACARLGELEQG 262
P++ V+ L AC+ +G L+ G
Sbjct: 639 PNHATFVAVLRACSHVGLLDDG 660
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 243/430 (56%), Gaps = 34/430 (7%)
Query: 64 ALSIFNNIPYP-STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS--IPPDFYSFPFLLRA 120
A +F +P + + +I + + + LF QM + + P+ + LL A
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSA 237
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS LC++ ++G VF+ D ++ + +
Sbjct: 238 CSTLCNY-----------EVGRFLSVFI---------------DVNKI-----PLNTILV 266
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
LID Y K GD+ A ++FD + ++ SW ++ G Q EEAI L+ +M +K
Sbjct: 267 TALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVK 326
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ I LV+ LSACA LG LE G+ +H Y+ N + ++ L+T LVD YAKCG I+ A I
Sbjct: 327 PNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLI 386
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + EK++ WNAM++GLA HG GR SL FS+M+ A ++P+ VT +G L C+H+GLV
Sbjct: 387 FVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLV 446
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E R F M +G+S +L+HY CM DLLGRAG ++EA E+++ M + D +W LL
Sbjct: 447 EEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLS 506
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIH N+E+A+ +E +M + + G +L+++YA++ RW+DV ++RR + +IKK
Sbjct: 507 ACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKP 566
Query: 481 AGCSLIQLNG 490
+GCS ++++G
Sbjct: 567 SGCSWVEVDG 576
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 244/454 (53%), Gaps = 24/454 (5%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++ ++ QIHQIHA L GL + H++ ++ + YA
Sbjct: 4 SLLRTATSLTQIHQIHAQTLIHGLPLQT--HLIPKLI---------------DLHSIDYA 46
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+ + P P+ FS+N++IRA+T+ SP N++ L+ +M S P ++FPF+L+ACS L
Sbjct: 47 RFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTL 106
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S + IH+ VL+LGF D+FV NSL+ +YC RL A+ +D++ +RD VS N++I
Sbjct: 107 GSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSII 166
Query: 185 DGYVKAGDLAHARQLFDRMPF-RDAVSWGTLVAGYAQSDQCEEAIQLFCNMM--DLDIKP 241
GYV+ G + AR LF+ MP R+ V W ++ GY + E + LF M+ +++P
Sbjct: 167 SGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQP 226
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ +V LSAC+ L E G+ + +I++N+I +++ L T L+D Y+KCG + A IF
Sbjct: 227 NAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIF 286
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ KNL +WNA++ G GL ++ + M +KP+ +T++ L C+ G ++
Sbjct: 287 DGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALE 346
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R++ + G+ + + D+ + G I++A + K DV +W+ ++ G
Sbjct: 347 LGREVHLYLGR-NGLDLNVILATALVDMYAKCGKIDDACLIFVKTS-EKDVALWNAMILG 404
Query: 422 CRIHGNVEIAEAAAEHVMK--LKPEDGGVYKVLA 453
HG+ + A +++ ++P D VL+
Sbjct: 405 LAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLS 438
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 236/428 (55%), Gaps = 33/428 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F+ IP S+N +I + + A+ LF +M ++ PD + ++ A ++
Sbjct: 148 ARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASAR 207
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S L + +HS + GF ++ ++N+L
Sbjct: 208 SGSIELGRQVHSWIADHGFGSNLKIVNAL------------------------------- 236
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G++ A LF + ++D +SW L+ GY + +EA+ LF M+ P++
Sbjct: 237 IDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPND 296
Query: 244 IALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ ++S L ACA LG ++ G+ IH YI+ L + S L T L+D Y+KCG I A ++F
Sbjct: 297 VTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVF 356
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
S K+L WNAM+ G AMHG + FSRM + IKPD +T +G L CSHAG++D
Sbjct: 357 NSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLD 416
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI M M D +W LL
Sbjct: 417 LGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKA 476
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C++HGNVE+ E A+++ K++P + G Y +L+++YA A RW +V +IR L+ +KK
Sbjct: 477 CKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVP 536
Query: 482 GCSLIQLN 489
GCS I+++
Sbjct: 537 GCSSIEID 544
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 219/394 (55%), Gaps = 4/394 (1%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
SP + L YA+S+F I P+ +NT+ R H L P++A+ L+ M ++ + P+ Y+F
Sbjct: 7 SPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTF 66
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
PFLL++C++L + IH VLKLG+ D++V SL+ +Y RL DA ++FD +
Sbjct: 67 PFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSH 126
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS L+ GY G + AR +FD +P +D VSW +++GY ++ +EA++LF M
Sbjct: 127 RDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEM 186
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
M +++PD +V+ +SA AR G +E G+ +H +I + + + L+DFY+KCG +
Sbjct: 187 MKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEM 246
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
TA +F K++ +WN ++ G L + +L+ F M+ + P+ VT+L L C
Sbjct: 247 ETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHAC 306
Query: 355 SHAGLVDEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
+H G +D R + ++ + GV+ + D+ + G IE A ++ M + +
Sbjct: 307 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLP 365
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPED 445
W+ ++ G +HG A + K +KP+D
Sbjct: 366 AWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDD 399
>gi|115482212|ref|NP_001064699.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|31432332|gb|AAP53975.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113639308|dbj|BAF26613.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|215694632|dbj|BAG89823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768315|dbj|BAH00544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 493
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/390 (40%), Positives = 235/390 (60%), Gaps = 11/390 (2%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQE 167
P +FPFL RA ++L + LA+ +H+Q L+ G + D+ V NSL+H+Y A+
Sbjct: 60 PSHLTFPFLARAAARLATPRLARAVHAQPLRRGLLPHDLHVSNSLVHMYAACALPGLARR 119
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
LFDEI + VS N L+DGY K DL AR++F RMP RD VSW ++ G + + EA
Sbjct: 120 LFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREA 179
Query: 228 IQLFCNMMDLD------IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
+ +F MM+ ++ +++ +VS L ACA LG+L +G+ +HRY+E + ++ L+
Sbjct: 180 LAVF-EMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLA 238
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKN--LFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
T LVD YAKCG I A+E+F++ +N + WNA++ GLA+HG+ R SL F +M A
Sbjct: 239 TSLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAG 298
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ PD +T L L C H GLVDEA F +E+ G+ ++HY C+ D+LGRAG +EEA
Sbjct: 299 VVPDEITYLSLLSACVHGGLVDEAWSFFRSLEA-QGLRPHVEHYACLVDVLGRAGRLEEA 357
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANA 459
++K MPM V V LL C +HG VE+ EA ++ L+P+ G Y L+++YA A
Sbjct: 358 YGVVKSMPMKPSVSVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVA 417
Query: 460 DRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
RW++ K R+ ++ +KK G S I +
Sbjct: 418 RRWQEAKKARKVMEERGVKKVPGFSEIDVG 447
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 16/296 (5%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ IP P+ S+N ++ + A +F++M D S+ ++ C +
Sbjct: 117 ARRLFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQR----DVVSWSAMIDGCVK 172
Query: 124 LCSHSLAQTIHSQV---------LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
H A + + ++ + V VL + H+ + + + L +
Sbjct: 173 CGEHREALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFP 232
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR--DAVSWGTLVAGYAQSDQCEEAIQLFC 232
++ +L+D Y K G + A ++F +P D + W ++ G A E++Q+F
Sbjct: 233 LNIRLATSLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQ 292
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M + PD I +S LSAC G +++ + R +E +R LVD + G
Sbjct: 293 KMEHAGVVPDEITYLSLLSACVHGGLVDEAWSFFRSLEAQGLRPHVEHYACLVDVLGRAG 352
Query: 293 YINTAIEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
+ A + +S K ++ A+L +HG L +++ + DG I
Sbjct: 353 RLEEAYGVVKSMPMKPSVSVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGRYI 408
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 232/391 (59%), Gaps = 3/391 (0%)
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR 161
M V I PD ++PFL +A S+L L +IH V+K GF D FV NSL+H+Y
Sbjct: 1 MLQVGIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGD 60
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
+ A+++FD +++VS N+++DGY K G L AR LFD MP RD SW L+ GYA+S
Sbjct: 61 IVYARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKS 120
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
+A+ +F M K + + +VS L ACA LG L++G+ +H+Y+ N ++ L
Sbjct: 121 GNYGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLR 180
Query: 282 TGLVDFYAKCGYINTAIEIFE--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
T L+D YAKCG + A +F S ++ ++ WNAM+ GLA HGL + SL ++ M A
Sbjct: 181 TSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAG 240
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
IKPD +T L L C+H GLV +A +F+ + G++ + +HY CM D++ RAG + EA
Sbjct: 241 IKPDEITFLCLLSACAHGGLVKQASYVFEGLGK-NGMTPKTEHYACMVDVMARAGQVAEA 299
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANA 459
+ + +MP+ + LL GC HG +++AE + +++L PE G Y L++VYA
Sbjct: 300 YQFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIG 359
Query: 460 DRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
RW++ +R +++ +KK G S ++++G
Sbjct: 360 RRWDEARIMREAMERRGVKKTPGYSFLEMSG 390
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 134/325 (41%), Gaps = 44/325 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P S++ +I + + +A+ +F +MRT + + +L A
Sbjct: 92 LDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANEVTMVSVLCA 151
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + +H ++ GF EL ++V
Sbjct: 152 CAHLGALDKGRMMHQYLVDNGF------------------------EL-------NLVLR 180
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFR--DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+LID Y K G + A +F + R D + W ++ G A +E++ L+ M
Sbjct: 181 TSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAG 240
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
IKPD I + LSACA G ++Q + + N + + +VD A+ G + A
Sbjct: 241 IKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVMARAGQVAEAY 300
Query: 299 EIF-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+ + E A+L G HG L+ + ++IE + D G VG S+
Sbjct: 301 QFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHD-----GRYVGLSNV 355
Query: 358 GLV----DEARKLFDEMESVYGVSK 378
+ DEAR + + ME GV K
Sbjct: 356 YAIGRRWDEARIMREAMER-RGVKK 379
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 239/432 (55%), Gaps = 36/432 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F + + S+ +II AH A+ LF +M++ + PD Y+ ++ A
Sbjct: 310 LNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHA 369
Query: 121 CSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
C+ CS+SL + +H+ + K ++ V N+LM++Y
Sbjct: 370 CA--CSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMY---------------------- 405
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
K G + A +F ++P ++ VSW T++ GY+Q+ EA+QLF +M
Sbjct: 406 ---------AKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-Q 455
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KPD++ + L ACA L LE+G+ IH +I D ++ LVD Y KCG + A
Sbjct: 456 LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQ 515
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++F+ +K++ W M+ G MHG G+ ++ F +M A I+P+ + L C+H+G
Sbjct: 516 QLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSG 575
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+ E KLFD M+S + +L+HY CM DLL R+G + A + I+ MP+ D +W L
Sbjct: 576 LLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGAL 635
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L GCRIH +VE+AE AEH+ +L+PE+ Y +LA+VYA A++WE+V KI+R + G +K
Sbjct: 636 LSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLK 695
Query: 479 KNAGCSLIQLNG 490
+ GCS I++ G
Sbjct: 696 NDQGCSWIEVQG 707
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 206/443 (46%), Gaps = 51/443 (11%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+++ ++H + L G F S ++ +++ A + SA +F+ +
Sbjct: 174 VRECKRVHGYVLKLG--FGSYNAVVNSLIAAYFKCGEVESARI-----------LFDELS 220
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
S+N++I T+ N + F QM + + D + +L AC+ + + +L +
Sbjct: 221 DRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRA 280
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H+ +K GF V +F+ NTL+D Y K G+
Sbjct: 281 LHAYGVKAGFSGGV---------------------MFN----------NTLLDMYSKCGN 309
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
L A ++F +M VSW +++A + + EAI LF M ++PD A+ S + A
Sbjct: 310 LNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHA 369
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA L++G+ +H +I+ N + + +S L++ YAKCG + A IF KN+ +W
Sbjct: 370 CACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSW 429
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
N M+ G + + L +L F M + ++KPD VT+ L C+ +++ R++ +
Sbjct: 430 NTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILR 488
Query: 373 VYGVSKELKHYGC-MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G +L H C + D+ + GL+ A ++ +P D+ +W+ ++ G +HG + A
Sbjct: 489 -KGYFSDL-HVACALVDMYVKCGLLVLAQQLFDMIPK-KDMILWTVMIAGYGMHGFGKEA 545
Query: 432 EAAAE--HVMKLKPEDGGVYKVL 452
+ E V ++PE+ +L
Sbjct: 546 ISTFEKMRVAGIEPEESSFTSIL 568
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 161/355 (45%), Gaps = 33/355 (9%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF+ I F +N ++ + + +V LF +M+ + I D Y+F +L+ +
Sbjct: 114 IFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAK 173
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H VLKLGF Y VV N+LI
Sbjct: 174 VRECKRVHGYVLKLGFGS-----------------------------YNAVV--NSLIAA 202
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G++ AR LFD + RD VSW ++++G + ++ F M++L + D+ L
Sbjct: 203 YFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATL 262
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
V+ L ACA +G L G+ +H Y + L+D Y+KCG +N A E+F E
Sbjct: 263 VNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGE 322
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+ +W +++ GL ++ F M ++PD + + C+ + +D+ R++
Sbjct: 323 TTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREV 382
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ ++ + L + ++ + G +EEA + ++P+ ++ W+ ++GG
Sbjct: 383 HNHIKK-NNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV-KNIVSWNTMIGG 435
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 9/224 (4%)
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YV GDL R++FD + W L++ YA+ E++ LF M +L I+ D+
Sbjct: 102 YVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTF 161
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
L A ++ + K +H Y+ + + L+ Y KCG + +A +F+ +
Sbjct: 162 TCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSD 221
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+++ +WN+M+ G M+G R L +F +M+ + D T++ LV C++ G + R L
Sbjct: 222 RDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRAL 281
Query: 367 FDEMESVYGV----SKELKHYGCMADLLGRAGLIEEALEMIKKM 406
YGV S + + D+ + G + A E+ KM
Sbjct: 282 H-----AYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKM 320
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 10/183 (5%)
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L CA L LE GK +H I N + +D L LV Y CG + IF+
Sbjct: 62 SVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILND 121
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+F WN ++ A G R S+ F +M E I+ D T L G + + V E +++
Sbjct: 122 KIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVH 181
Query: 368 DEMESVYGVSKELKHYGCMADLLGRA----GLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
Y + Y + + L A G +E A + ++ DV W+ ++ GC
Sbjct: 182 G-----YVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELS-DRDVVSWNSMISGCT 235
Query: 424 IHG 426
++G
Sbjct: 236 MNG 238
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 107/277 (38%), Gaps = 65/277 (23%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
+++ +IH H L KG + S H+ ++ L A +F+ I
Sbjct: 475 ALEKGREIHGHILRKG--YFSDLHVACALVDMYVK-----------CGLLVLAQQLFDMI 521
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P + +I + + A+ F +MR I P+ SF +L AC+
Sbjct: 522 PKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACT--------- 572
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT--------- 182
HS +LK G+ +LFD + CN
Sbjct: 573 --HSGLLKEGW------------------------KLFDSMKSE----CNIEPKLEHYAC 602
Query: 183 LIDGYVKAGDLAHARQLFDRMPFR-DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
++D +++G+L+ A + + MP + DA WG L++G E A ++ ++ +L+ P
Sbjct: 603 MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELE--P 660
Query: 242 DNIALVSALSAC-ARLGELEQGKNIHRYIELNQIRVD 277
+N L+ A + E+ K I R I ++ D
Sbjct: 661 ENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKND 697
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 239/426 (56%), Gaps = 4/426 (0%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
N +T S+ + I T A FS MR + P+ +F +L C S
Sbjct: 28 LNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSG 87
Query: 128 S--LAQTIHSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S L +H KLG + V V +++ +Y R++ A+ +FD + ++ V+ NT+I
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMI 147
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
DGY+++G + +A ++FD+MP RD +SW ++ G+ EEA+ F M +KPD +
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYV 207
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
A+++AL+AC LG L G +HRY+ + + +S L+D Y +CG + A ++F+
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKM 267
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++ + +WN+++VG A +G SLVYF +M E R KPD VT GAL CSH GLV+E
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F M S Y +S ++HYGC+ DL RAG +E+AL++++ MPM + V LL CR
Sbjct: 328 RYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRN 387
Query: 425 HGNVEI-AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HGN + AE +H+ L + Y +L+++YA +WE K+RR + +KK G
Sbjct: 388 HGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGF 447
Query: 484 SLIQLN 489
S I+++
Sbjct: 448 SSIEID 453
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+ +I A+ F +M+ + PD+ + L AC+
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAALNACTN 218
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + S +H V+ F +V V NSL+ +YC + A+++FD++ R VVS N++
Sbjct: 219 LGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSV 278
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G+ AH E++ F M + KPD
Sbjct: 279 IVGFAANGN-AH------------------------------ESLVYFRKMQEERFKPDA 307
Query: 244 IALVSALSACARLGELEQGKNIHRY--IELNQIRVDSFLS--TGLVDFYAKCGYINTAIE 299
+ AL+AC+ +G +E+G RY I ++ R+ + LVD Y++ G + A++
Sbjct: 308 VTFTGALTACSHVGLVEEGL---RYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 300 IFESSQEK-NLFTWNAMLVGLAMHG 323
+ +S K N ++L HG
Sbjct: 365 LVQSMPMKPNEVVIGSLLAACRNHG 389
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA--- 254
Q ++ + VSW + + ++ + EA + F +M ++P++I ++ LS C
Sbjct: 26 QRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFP 85
Query: 255 ----RLGELEQGKNIHRYIELNQIRV---------------------------DSFLSTG 283
LG+L G ++ N + V +S
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNT 145
Query: 284 LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
++D Y + G ++ A ++F+ E++L +W AM+ G G +L +F M + +KPD
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPD 205
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH----YGCMADLLGRAGLIEEA 399
V I+ AL C++ G + F Y +S++ K+ + DL R G +E A
Sbjct: 206 YVAIIAALNACTNLGALS-----FGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFA 260
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
++ KM V W+ ++ G +GN
Sbjct: 261 RQVFDKMEK-RTVVSWNSVIVGFAANGN 287
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 210/345 (60%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D N+++ Y + A LF+ + R+VVS +T++ GY KAGD+ AR LFDRMP
Sbjct: 42 DAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMP 101
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
++ VSW +V+GYA ++AI+ F M + +KPD+ ++S L++CA G L GK
Sbjct: 102 VKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKR 161
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
+H IE + + +S LVD YAKCG ++ A+ +F +K+L +WN ML GLAMHG
Sbjct: 162 VHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGH 221
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
G +L FS M + +PD VT++ L C HAG VDE + F+ ME YG+ ++HYG
Sbjct: 222 GEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYG 281
Query: 385 CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE 444
CM DLLGR G ++EA +++ MP+ +V +W LLG CR+H V +AE + + KL+P
Sbjct: 282 CMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPS 341
Query: 445 DGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
D G Y +L++++A+A W V +R + I+K +G S I+++
Sbjct: 342 DPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASSIEVD 386
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 43/265 (16%)
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
LF + RDVVS N++I G +K G+L+ A +LFD MP +DAVSW T++ GY ++ + +A
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKA 62
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
LF +M P+ +N+ + + +V
Sbjct: 63 FGLFESM------PE--------------------RNVVSW-------------STMVSG 83
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y K G + A +F+ KNL +W ++ G A+ GL + ++ F +M EA +KPD T+
Sbjct: 84 YCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTV 143
Query: 348 LGALVGCSHAGLVDEARKLFDEMESV-YGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+ L C+ +GL+ +++ +E + Y S + + + D+ + G ++ AL + M
Sbjct: 144 ISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSN--ALVDMYAKCGQVDRALSVFNGM 201
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIA 431
D+ W+ +L G +HG+ E A
Sbjct: 202 SK-KDLVSWNCMLQGLAMHGHGEKA 225
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 33/264 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ +P + S+ I+ + + +A+ F QM + PD + +L +
Sbjct: 90 MEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILAS 149
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ L + +H+ + ++ + C V V N+L+ +Y ++ A +F+ + +D+VS
Sbjct: 150 CAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSW 209
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ G G E+A+QLF M +
Sbjct: 210 NCMLQGLAMHG-------------------------------HGEKALQLFSIMRQEGFR 238
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD + LV+ L AC G +++G +E + V G +VD + G + A
Sbjct: 239 PDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYR 298
Query: 300 IFESSQ-EKNLFTWNAMLVGLAMH 322
+ +S E N+ W +L MH
Sbjct: 299 LVQSMPVEPNVVIWGTLLGACRMH 322
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+ +F+ E+++ +WN+M+ GL G L ++ + D V+ L G A
Sbjct: 1 MRLFKVMDERDVVSWNSMIRGLLKVG----ELSEACKLFDEMPMKDAVSWNTILDGYVKA 56
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
G +++A LF+ M VS + M +AG +E A + +MP+ ++ W+
Sbjct: 57 GEMNKAFGLFESMPERNVVS-----WSTMVSGYCKAGDMEMARMLFDRMPV-KNLVSWTI 110
Query: 418 LLGGCRIHGNVEIAEAAAEHVMK--LKPEDGGVYKVLA 453
++ G + G + A + E + + LKP+DG V +LA
Sbjct: 111 IVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILA 148
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 235/432 (54%), Gaps = 31/432 (7%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ L+YA +F+ + S S+ +I A+ ++ V LF +M + P+ + L+
Sbjct: 276 ENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLV 335
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+ C + L + +H+ L+ GF + V
Sbjct: 336 KECGTAGALELGKLLHAFTLRNGFTLSL-------------------------------V 364
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
ID Y K GD+ AR +FD +D + W +++ YAQ++ +EA +F +M
Sbjct: 365 LATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCG 424
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
I+P+ +VS L CA+ G LE GK IH YI+ I+ D L T VD YA CG I+TA
Sbjct: 425 IRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAH 484
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F + ++++ WNAM+ G AMHG G +L F M + P+ +T +GAL CSH+G
Sbjct: 485 RLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSG 544
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+ E ++LF +M +G + +++HYGCM DLLGRAGL++EA E+IK MPM ++ V+
Sbjct: 545 LLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSF 604
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C++H N+++ E AA+ + L+P G +++++YA+A+RW DV IRR++ I
Sbjct: 605 LAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIV 664
Query: 479 KNAGCSLIQLNG 490
K G S I++NG
Sbjct: 665 KEPGVSSIEVNG 676
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 165/371 (44%), Gaps = 31/371 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ I S++T+IR++ A+ L M + + P +
Sbjct: 175 LALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHV 234
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++L L + +H+ V++ G + V C
Sbjct: 235 LAELADLKLGKAMHAYVMRNG-----------------------------KCGKSGVPLC 265
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
LID YVK +LA+AR++FD + +SW ++A Y + E ++LF M+ +
Sbjct: 266 TALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMF 325
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ I ++S + C G LE GK +H + N + L+T +D Y KCG + +A +
Sbjct: 326 PNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSV 385
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+S + K+L W+AM+ A + + F M I+P+ T++ L+ C+ AG +
Sbjct: 386 FDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSL 445
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + + ++ G+ ++ D+ G I+ A + + D+ +W+ ++
Sbjct: 446 EMGKWIHSYIDK-QGIKGDMILKTSFVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMIS 503
Query: 421 GCRIHGNVEIA 431
G +HG+ E A
Sbjct: 504 GFAMHGHGEAA 514
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 155/358 (43%), Gaps = 42/358 (11%)
Query: 71 IPYPSTFSYNTIIRAHTLF-------SSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+P + SY++ H+ + P +A +++ MR D + P +L+AC
Sbjct: 77 VPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCL 136
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S L Q +H V+K GF DVFV CN L
Sbjct: 137 IPSFLLGQEVHGFVVKNGFHGDVFV-------------------------------CNAL 165
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I Y + G LA AR LFD++ +D VSW T++ Y +S +EA+ L +M + +KP
Sbjct: 166 IMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSE 225
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQI--RVDSFLSTGLVDFYAKCGYINTAIEIF 301
I ++S A L +L+ GK +H Y+ N + L T L+D Y KC + A +F
Sbjct: 226 IGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVF 285
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ + ++ +W AM+ + F +M+ + P+ +T+L + C AG +
Sbjct: 286 DGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGAL- 344
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
E KL G + L D+ G+ G + A + D+ +WS ++
Sbjct: 345 ELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFK-SKDLMMWSAMI 401
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 250/474 (52%), Gaps = 44/474 (9%)
Query: 16 IHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPS 75
+ + HA GL + S ILT +F I +AS +F +IP P
Sbjct: 736 LKKTHAKIFAYGLQYDS--RILTKFAIMYVSFNRIDAASI-----------VFEDIPNPC 782
Query: 76 TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS 135
+F +N +IR L+++ L+S+M + PD ++FPF L++C+ L + IH
Sbjct: 783 SFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQ 842
Query: 136 QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
++ G D+FV DA L+D Y K GD+
Sbjct: 843 HLVCCGCSNDLFV---------------DA----------------ALVDMYAKCGDIEA 871
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
AR +FD+M RD VSW ++++GYA + E + F M + P+ ++++S L AC
Sbjct: 872 ARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGN 931
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
LG L +G+ H Y+ D ++T ++D Y+KCG ++ A +F+ + K+L W+AM
Sbjct: 932 LGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAM 991
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
+ +HG GR ++ F +M++A ++P VT L CSH+GL++E + F M +
Sbjct: 992 IASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFV 1051
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
++++L +Y CM DLLGRAG + EA+++I+ MP+ D +W LLG CRIH N+++AE A
Sbjct: 1052 IARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIA 1111
Query: 436 EHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+H+ L P G + +L+++YA RW +V K+R+ + K G SL++ +
Sbjct: 1112 DHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYD 1165
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 227/428 (53%), Gaps = 32/428 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F+ +P S++T+I + + A+ LF +M P+ + L+AC+
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + IH + GF D V L
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSV-------------------------------STAL 348
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y+K A LF R+P +D VSW L++GYAQ+ +++ +F NM+ I+PD
Sbjct: 349 IDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDA 408
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+A+V L+A + LG +Q +H Y+ + + F+ L++ Y+KCG + A+++F+
Sbjct: 409 VAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKG 468
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDE 362
+++ W++M+ +HG G +L F +M++ + ++P+ VT L L CSHAGLV+E
Sbjct: 469 MIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEE 528
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
K+FD M Y + + +H+G M DLLGR G + +A+++I +MP+ VW LLG C
Sbjct: 529 GLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGAC 588
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
RIH N+E+ EAAA+++ L P G Y +L+++YA +W++V ++R + +KK G
Sbjct: 589 RIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFG 648
Query: 483 CSLIQLNG 490
S++++ G
Sbjct: 649 QSMVEVRG 656
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 34/364 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACS 122
AL +F P T + +++ + + P A+ LFSQM + + D + ++ AC+
Sbjct: 158 ALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACA 217
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
QL + +H V++ F D+ ++NSL+++Y
Sbjct: 218 QLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLY-------------------------- 251
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
K G A LF +MP +D +SW T++A YA ++ EA+ LF M++ +P+
Sbjct: 252 -----AKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 306
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++ +VSAL ACA LE+GK IH+ +D +ST L+D Y KC + A+++F+
Sbjct: 307 SVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQ 366
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+K++ +W A+L G A +G+ S+ F M+ I+PD V ++ L S G+ +
Sbjct: 367 RLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQ 426
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
A L + G + + + +L + G + +A+++ K M + DV +WS ++
Sbjct: 427 ALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIV-RDVVIWSSMIAAY 484
Query: 423 RIHG 426
IHG
Sbjct: 485 GIHG 488
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 202/456 (44%), Gaps = 49/456 (10%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L + + C + + Q+H+ G+L + LYA L
Sbjct: 6 VLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYA-------------KCASL 52
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLRA 120
A +F+ P+P+ +N+ +R++ + LF M T PD ++ P L+A
Sbjct: 53 QAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKA 112
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L L + IH GF + DEI D+
Sbjct: 113 CAGLRMLELGKVIH------GF-----------------------AKKNDEI-GSDMFVG 142
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-I 239
+ L++ Y K G + A ++F+ D V W ++V GY Q++ EEA+ LF M+ +D +
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
D + LVS +SACA+L ++ G +H + + D L L++ YAK G A
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F EK++ +W+ M+ A + +L F MIE R +P+ VT++ AL C+ +
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
++E +K+ ++ G + + D+ + +EA+++ +++P DV W LL
Sbjct: 323 LEEGKKI-HKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPK-KDVVSWVALL 380
Query: 420 GGCRIHGNVEIAEAAAEHVMK--LKPEDGGVYKVLA 453
G +G + +++ ++P+ V K+LA
Sbjct: 381 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILA 416
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 278/560 (49%), Gaps = 94/560 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +K+C + K + QIH F + P H+L+ S + +Y+
Sbjct: 26 SLLKQCPSTKTLQQIHTQFTIHSIH--KPNHLLS---------------QSISLKDFTYS 68
Query: 65 LSIFNNI-PYPSTFSYNTIIRAHT--LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
IF++I P+P+ +++N ++RA T PL + L+ QM+T++I P+ ++FPF+ AC
Sbjct: 69 TLIFSHITPHPNDYAFNIMLRATTTTWHDYPL-TLHLYHQMKTLNISPNNFTFPFVFLAC 127
Query: 122 SQLCSHSLAQTIHSQVLKLG---------------FIC----------------DVFVLN 150
+ L +A+ H +V KLG F C D+ N
Sbjct: 128 ANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWN 187
Query: 151 SLMHVYC----------VFHRLRDAQ-----------------ELFDEILYRDV------ 177
SL+ Y VF RLR+ EL D L R V
Sbjct: 188 SLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE 247
Query: 178 --VSCNT-----LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
+ N+ LI Y K G+L +R++FD MP RD ++W ++ YAQ+ +EAI L
Sbjct: 248 RGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISL 307
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
F +M + + P+ + L + LSACA +G L+ GK + Y ++ D F++T L+D YAK
Sbjct: 308 FHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAK 367
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTIL 348
CG + +A +F KN +WNAM+ LA HG + +L F RM + +P+ +T +
Sbjct: 368 CGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFV 427
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L C HAGLVDE +LFD M +++G+ +++HY CM DLL RAG + EA ++I+KMP
Sbjct: 428 SLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPE 487
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D L C+ NV+I E + +++L P + G Y + + +Y N + W+D ++
Sbjct: 488 KPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARM 547
Query: 469 RRSLDAGKIKKNAGCSLIQL 488
R + + K GCS I++
Sbjct: 548 RALMRENGVTKTPGCSWIEV 567
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 278/560 (49%), Gaps = 94/560 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +K+C + K + QIH F + P H+L+ S + +Y+
Sbjct: 26 SLLKQCPSTKTLQQIHTQFTIHSIH--KPNHLLS---------------QSISLKDFTYS 68
Query: 65 LSIFNNI-PYPSTFSYNTIIRAHT--LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
IF++I P+P+ +++N ++RA T PL + L+ QM+T++I P+ ++FPF+ AC
Sbjct: 69 TLIFSHITPHPNDYAFNIMLRATTTTWHDYPL-TLHLYHQMKTLNISPNNFTFPFVFLAC 127
Query: 122 SQLCSHSLAQTIHSQVLKLG---------------FIC----------------DVFVLN 150
+ L +A+ H +V KLG F C D+ N
Sbjct: 128 ANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWN 187
Query: 151 SLMHVYC----------VFHRLRDAQ-----------------ELFDEILYRDV------ 177
SL+ Y VF RLR+ EL D L R V
Sbjct: 188 SLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE 247
Query: 178 --VSCNT-----LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
+ N+ LI Y K G+L +R++FD MP RD ++W ++ YAQ+ +EAI L
Sbjct: 248 RGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISL 307
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
F +M + + P+ + L + LSACA +G L+ GK + Y ++ D F++T L+D YAK
Sbjct: 308 FHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAK 367
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE--ARIKPDGVTIL 348
CG + +A +F KN +WNAM+ LA HG + +L F RM + +P+ +T +
Sbjct: 368 CGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFV 427
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L C HAGLVDE +LFD M +++G+ +++HY CM DLL RAG + EA ++I+KMP
Sbjct: 428 SLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPE 487
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D L C+ NV+I E + +++L P + G Y + + +Y N + W+D ++
Sbjct: 488 KPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARM 547
Query: 469 RRSLDAGKIKKNAGCSLIQL 488
R + + K GCS I++
Sbjct: 548 RALMRENGVTKTPGCSWIEV 567
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 235/430 (54%), Gaps = 36/430 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A+ +F+ + + ++ ++I A+ A+ LF +M + PD ++ +L A
Sbjct: 49 LDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHA 108
Query: 121 CSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
C+ C+ SL + +H+ + + ++FV
Sbjct: 109 CA--CNGSLENGKDVHNYIRENDMQSNIFV------------------------------ 136
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
CN L+D Y K G + A +F MP +D +SW T++ GY+++ EA+ LF +M+ L+
Sbjct: 137 -CNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV-LE 194
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KPD L L ACA L L++GK +H +I N D ++ LVD Y KCG A
Sbjct: 195 MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLAR 254
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ K+L TW M+ G MHG G ++ F+ M +A I+PD V+ + L CSH+G
Sbjct: 255 LLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSG 314
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+DE + F+ M+ V +L+HY C+ DLL R+G + A + IK MP+ D +W L
Sbjct: 315 LLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGAL 374
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L GCRIH +V++AE AEHV +L+PE+ G Y +LA+ YA A++WE+V K+R+ + +K
Sbjct: 375 LSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLK 434
Query: 479 KNAGCSLIQL 488
KN GCS I++
Sbjct: 435 KNPGCSWIEV 444
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
CNTL+D Y K G L A +FD M R V+W +L+A YA+ +EAI+LF M +
Sbjct: 36 CNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGV 95
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + + L ACA G LE GK++H YI N ++ + F+ L+D YAKCG + A
Sbjct: 96 SPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANS 155
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F K++ +WN M+ G + + L +L F M+ +KPDG T+ L C+
Sbjct: 156 VFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACILPACASLAS 214
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+D +++ + G + + + D+ + G+ A + +P D+ W+ ++
Sbjct: 215 LDRGKEVHGHILR-NGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPT-KDLITWTVMI 272
Query: 420 GGCRIHG 426
G +HG
Sbjct: 273 AGYGMHG 279
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 229/423 (54%), Gaps = 8/423 (1%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P+ ++ +++ +H + + LF +MR I + +L L + + I
Sbjct: 1072 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 1131
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H V+K GF +FV NSL+ +Y + A+ LF EI +++VS N LI Y G
Sbjct: 1132 HGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 1191
Query: 194 AHARQLF------DRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
A +F D P + VSW ++ G+A Q EEA++LF M +K +++
Sbjct: 1192 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 1251
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+ S LS CA L L G+ IH ++ + + + + GL++ Y K G +FE +
Sbjct: 1252 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 1311
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+L +WN M+ G +HGLG ++ F +MI+ +PDGVT + L CSHAGLV E R+
Sbjct: 1312 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 1371
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LFD+M + V +++HY CM DLLGRAGL++EA +++K MP+ + VW LL CR+H
Sbjct: 1372 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 1431
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N E+AE A + L E G Y +L+++YA + RWED K+R S +KK G S
Sbjct: 1432 KNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSW 1491
Query: 486 IQL 488
IQ+
Sbjct: 1492 IQV 1494
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 210/492 (42%), Gaps = 61/492 (12%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N+ +++C QIH+ + G + ++ F +S A
Sbjct: 875 FNDLLQQCSKSHLSQQIHSQIIVTG--SHRSAFLAARVVSVYAGFGLVSDAQR------- 925
Query: 63 YALSIFNNIP---YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+F P + + +N+I+RA+ A+ ++ +MR + + D ++FP ++R
Sbjct: 926 ----VFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIR 981
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC+ + S L +++H V+++GF ++ V N LM +Y R+ DA+++F+ + R VS
Sbjct: 982 ACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS 1041
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
NT++ GY D A ++F M + V+W +L++ +A+ Q E ++LF M
Sbjct: 1042 WNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 1101
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
I AL LS L ++GK IH Y+ F+ L+ Y K G +N
Sbjct: 1102 MRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVN 1161
Query: 296 TAIEIFESSQEKNLFTWNAMLV-------------------------------------- 317
A +F + KN+ +WNA++
Sbjct: 1162 AARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVI 1221
Query: 318 -GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
G A G G +L F RM A++K + VTI L C+ + R++ +
Sbjct: 1222 GGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMD 1281
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
L G + ++ ++G +E + +K+ D+ W+ ++ G IHG E A +
Sbjct: 1282 GNILVGNGLI-NMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYGIHGLGENAIRTFD 1339
Query: 437 HVMKLKPEDGGV 448
++K E GV
Sbjct: 1340 QMIKDGFEPDGV 1351
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 260/504 (51%), Gaps = 71/504 (14%)
Query: 58 TDPLSYALSIFNNIPYPS-TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
++ Y + +F+ P S TF YNT+IR NAV L++ M +I PD ++F F
Sbjct: 50 SNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSF 109
Query: 117 LLRACSQLCSHSLAQTIHSQVLKL-------------------GFICDVFVLNSLMHVYC 157
+L+AC++L L IHS V K GF+ D + + M V
Sbjct: 110 VLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKN 169
Query: 158 V------------FHRLRDAQELFDEIL-------------------------------- 173
V F + R+A +LF +L
Sbjct: 170 VVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDR 229
Query: 174 -------YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
R+V +L+D Y K G + AR +FD M +D V W ++ GYA + E
Sbjct: 230 CMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPRE 289
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
AI+LF M ++++PD A+V ALS+CA LG LE G + + + L T L+D
Sbjct: 290 AIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLID 349
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
FYAKCG + A+ +++ +EK+ +NA++ GLAM+G + F +M + I P+ T
Sbjct: 350 FYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHT 409
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L GC+HAGLVD+ R F+ M + V+ ++HYGCM DLL RAG ++EA +IK M
Sbjct: 410 FVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGM 469
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
PM +V VW LLGGCR+H ++AE + +++L+P + G Y +L+++Y+ + RW++
Sbjct: 470 PMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAE 529
Query: 467 KIRRSLDAGKIKKNAGCSLIQLNG 490
KIR +++ ++K G S ++++G
Sbjct: 530 KIRSTVNEKGMQKLPGYSWVEVDG 553
>gi|10086462|gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
Length = 539
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 262/497 (52%), Gaps = 58/497 (11%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+ I++C + QI Q+ +HFLT G H ++ L + + A SP D LS
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAG-------HFQSSFLRSRLLER---CAISPFGD-LS 54
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP------DFYSFPF 116
+A+ IF IP P T +N IIR S P A + M S D + F
Sbjct: 55 FAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSF 114
Query: 117 LLRACSQ-LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
L+AC++ LCS ++ Q +H Q+ + G D +
Sbjct: 115 TLKACARALCSSAMDQ-LHCQINRRGLSADSLL--------------------------- 146
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
C TL+D Y K GDL A +LFD MP RD SW L+AG ++ EA++L+ M
Sbjct: 147 ----CTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
I+ + +V+AL AC+ LG++++G+NI H Y N I +S +D Y+KCG++
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFV 257
Query: 295 NTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A ++FE + +K++ TWN M+ G A+HG +L F ++ + IKPD V+ L AL
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C HAGLV+ +F+ M + GV + +KHYGC+ DLL RAG + EA ++I M M D
Sbjct: 318 CRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+W LLG I+ +VE+AE A+ + ++ + G + +L++VYA RW+DV ++R ++
Sbjct: 377 LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDME 436
Query: 474 AGKIKKNAGCSLIQLNG 490
+ ++KK G S I+ G
Sbjct: 437 SKQVKKIPGLSYIEAKG 453
>gi|359485617|ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Vitis vinifera]
Length = 531
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 249/490 (50%), Gaps = 50/490 (10%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L IK K IKQ+H + +T G H+L P S+AS
Sbjct: 20 LQGLIKHPKQIKQVHSL---LITNG-------HLL-----------PCSNAS-------- 50
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
N+ + +T YN++IR + F P +++F+ M PP+ +FP +++ +
Sbjct: 51 -------NLKWMATLLYNSLIRGYLNFVEPHKTLLIFTHMLAHQAPPNNLTFPSIIKKAA 103
Query: 123 QLCSHSLA----QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
CS SLA +H+ V+K G D+F+ SL+ +Y ++ DA +F+EI VV
Sbjct: 104 S-CSPSLAFMIGTPLHTHVIKRGLSHDLFIQTSLVVLYARLCKVSDACRVFEEISRPCVV 162
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N ++D K GD+ A LF+ MP RD VSW +++ G+ ++ EEAIQ F MM +
Sbjct: 163 SSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFGRNRCFEEAIQFFVKMMGHE 222
Query: 239 ------IKPDNIALVSALSACARL---GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+KP+ VS LS+C L G L QGK IH YI N++ F+ T L+ Y
Sbjct: 223 DVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQIHGYIIRNEVEFTVFMGTALIALYG 282
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
K G + A++IF K + TWNAM+ LA +G + +L F +M + PD VT +
Sbjct: 283 KTGCLENAMKIFNGMVVKGVCTWNAMISSLACNGREKQALDLFEKMKMQGLCPDEVTFVA 342
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
+ C+ + V F M +GV + HYGC+ DLLGRAGL+EEA E IK+MP
Sbjct: 343 VITACARSKFVVLGLGFFQSMWCDFGVVPRMVHYGCVVDLLGRAGLLEEATEFIKRMPFE 402
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
D V LLG C++HG +E+ +++L+P G Y L+++YA + W R
Sbjct: 403 PDATVLGALLGACKVHGAIELGNEVGRRLLELQPHHCGRYVTLSNIYAGGEIWGHAADWR 462
Query: 470 RSLDAGKIKK 479
+++ I K
Sbjct: 463 KAMTEAGISK 472
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 241/440 (54%), Gaps = 41/440 (9%)
Query: 51 SSASSPTTDPLSY--ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
S A+ T LS+ +L +F+ + P+ F +N +I+ + P A++L+ +M
Sbjct: 96 SYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFR 155
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
P+ Y++P +L+ACS + +H+ ++K G D +L+S + +Y F RL +A+ +
Sbjct: 156 PNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRI 215
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
D+ K G++ DAV + EA+
Sbjct: 216 LDD-----------------KGGEV-------------DAVCMPDRKGCFM------EAL 239
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
++F M I+P L S LSACA LG L+QG+ IH Y + N I++D L T LVD Y
Sbjct: 240 EIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMY 299
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
AKCG I+ A E+FE K + +WNAM+ GLAMHG ++ FS+M I P+ +T +
Sbjct: 300 AKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFV 356
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L C+H GLV + +F+ M YGV +++HYGC+ DLLGRAGL+ EA +++ +P
Sbjct: 357 GVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPT 416
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
VW LLG CR HGNVE+ E + +++L+P++ G Y +L+++YA A RWE+V ++
Sbjct: 417 EPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEV 476
Query: 469 RRSLDAGKIKKNAGCSLIQL 488
R+ + IK G S+I L
Sbjct: 477 RKLMKERGIKTTPGTSIIDL 496
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 261/483 (54%), Gaps = 52/483 (10%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
KT Q+ QIHAH L L H IL + F + A D + YA +F+
Sbjct: 20 KTRTQLPQIHAHILRHHL------HQSNQIL---SHFISVCGA----LDKMGYANLVFHQ 66
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P+ +N++I+ ++L N+++LFSQM+ I PD ++F LL++CS +C + +
Sbjct: 67 TQNPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIG 126
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ +H V+ +GF E F I +ID Y
Sbjct: 127 KGVHGVVIVVGF------------------------ERFSSIRI-------GIIDLYTSC 155
Query: 191 GDLAHARQLFDRMPFRD-----AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
G + A+++FD M RD VSW +++AG QS + EA++LF M D +PD+
Sbjct: 156 GRMEDAKKVFDEMLDRDMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDAT 215
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFES 303
+V+ L CARLG ++ G+ IH Y E +++ D F+S G LVDFY KCG + TA +F
Sbjct: 216 VVTILPVCARLGAVDVGEWIHSYAESSRLLRD-FISVGNSLVDFYCKCGILETAWRVFNE 274
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+KN+ +WNAM+ GL +G G L F MI ++P+ T +G L C+HAGLV+
Sbjct: 275 MPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERG 334
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R LF M + + +L+H+GCM DLL R G +EEA ++++ MPM + +W LL R
Sbjct: 335 RNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYR 394
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
G+V+ AE A + +++L+P + G Y +L++VYA +W++V K+R + I+KN G
Sbjct: 395 TIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQ 454
Query: 484 SLI 486
S++
Sbjct: 455 SMV 457
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 226/422 (53%), Gaps = 31/422 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F + S+N II AH + + LF M + PD +++ +L+AC+ +
Sbjct: 370 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 429
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IH++++K D FV +L ID
Sbjct: 430 LNCGMEIHNRIIKSRMGLDSFVGIAL-------------------------------IDM 458
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G + A +L DR+ + VSW +++G++ Q EEA + F M+++ + PDN
Sbjct: 459 YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTY 518
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ L CA L +E GK IH I +++ D+++S+ LVD Y+KCG + IFE +
Sbjct: 519 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 578
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ TWNAM+ G A HGLG +L F M +KP+ T L L C H GLV++
Sbjct: 579 RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 638
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M S YG+ +L+HY C+ D++GR+G + +ALE+I+ MP D +W LL C+IHG
Sbjct: 639 FHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHG 698
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NVE+AE AA +++L+PED Y +L+++YANA W +V K+R+ + +KK GCS I
Sbjct: 699 NVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 758
Query: 487 QL 488
++
Sbjct: 759 EI 760
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 171/392 (43%), Gaps = 43/392 (10%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN++P + SYN II + + A+ +F ++ + D S RAC+ +
Sbjct: 269 LFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKG 328
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+H +K + ++ N ++D
Sbjct: 329 DLEGLQVHGLSMK-------------------------------SLCQSNICVANAILDM 357
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G L A +F+ M RDAVSW ++A + Q+ E+ + LF M+ ++PD
Sbjct: 358 YGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTY 417
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S L ACA L G IH I +++ +DSF+ L+D Y+KCG + A ++ + E
Sbjct: 418 GSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAE 477
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+ + +WNA++ G ++ + FS+M+E + PD T L C++ V+ +++
Sbjct: 478 QTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQI 537
Query: 367 FDEMESVYGVSKELKH----YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
++ + KEL+ + D+ + G +++ + +K P D W+ ++ G
Sbjct: 538 HAQI-----IKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNAMVCGY 591
Query: 423 RIHGNVEIAEAAAEHVM--KLKPEDGGVYKVL 452
HG E A E++ +KP VL
Sbjct: 592 AQHGLGEEALKIFEYMQLENVKPNHATFLAVL 623
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 218/489 (44%), Gaps = 67/489 (13%)
Query: 44 ITTFKPISSASSP------TTDPLSYALSIFNNIPYPSTFSYNTII----------RAHT 87
+T FKP ++ L +A +F+ +P T S+N ++ A
Sbjct: 70 LTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQK 129
Query: 88 LF----SSPLNAVVLFS-QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGF 142
LF + V LF +M + D +F +L++CS L H IH +K+GF
Sbjct: 130 LFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGF 189
Query: 143 ICDVFVLNSLMHVY---CVFH-RLRDAQELFDEI------------------LYRDVVSC 180
CDV ++L+ +Y CV + LR ELF E+ DVV
Sbjct: 190 DCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIG 249
Query: 181 NTLIDGYVKAGDLAH-ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+D Y+K +L+ + QLF+ +P + S+ ++ GYA+SD+ EA+ +F + +
Sbjct: 250 TATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 309
Query: 240 KPDNIALVSALSACARL-GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
D ++L A ACA + G+LE G +H + + + ++ ++D Y KCG + A
Sbjct: 310 GLDEVSLSGAXRACAVIKGDLE-GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 368
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS--- 355
+FE ++ +WNA++ +G +L F M+++ ++PD T L C+
Sbjct: 369 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ 428
Query: 356 --HAGLVDEARKLFDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
+ G+ R + M +S G++ + D+ + G++E+A ++ ++
Sbjct: 429 ALNCGMEIHNRIIKSRMGLDSFVGIA--------LIDMYSKCGMMEKAEKLHDRLAE-QT 479
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE-DGGVYKVLADVYANADRWEDVVKIRR 470
V W+ ++ G + E A+ ++++ + D Y + D AN V++ +
Sbjct: 480 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANL----VTVELGK 535
Query: 471 SLDAGKIKK 479
+ A IKK
Sbjct: 536 QIHAQIIKK 544
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 37/267 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A + + + + S+N II +L A FS+M + + PD +++ +L
Sbjct: 465 MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 524
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + L + IH+Q++K D ++ ++L+ +Y ++D Q +F++ RD V+
Sbjct: 525 CANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTW 584
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ G YAQ EEA+++F M ++K
Sbjct: 585 NAMVCG-------------------------------YAQHGLGEEALKIFEYMQLENVK 613
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLS--TGLVDFYAKCGYINTA 297
P++ ++ L AC +G +E+G +H + L+ +D L + +VD + G ++ A
Sbjct: 614 PNHATFLAVLRACGHMGLVEKG--LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKA 671
Query: 298 IEIFESSQ-EKNLFTWNAMLVGLAMHG 323
+E+ E E + W +L +HG
Sbjct: 672 LELIEGMPFEADAVIWRTLLSXCKIHG 698
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 52/368 (14%)
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
+ P +F + + CS + + H++++ F VFV N L+ +Y L A
Sbjct: 37 ATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFA 96
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP-----------FR-------- 206
++FD + RD VS N ++ GY GD+ A++LFD MP FR
Sbjct: 97 FKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVF 156
Query: 207 DAVSWGTLVAGYAQSDQCEEAIQ---LFCNM-MDLDIKPDNIALVSALSACARLGELEQG 262
D ++ ++ + + IQ L M D D+ + L C + +L G
Sbjct: 157 DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGG 216
Query: 263 --------------KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI-NTAIEIFESSQEK 307
+H + D + T +D Y KC + + + ++F S
Sbjct: 217 LELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNH 276
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
NL ++NA++VG A G +L F + ++ + D V++ GA C+ K
Sbjct: 277 NLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACA-------VIKGD 329
Query: 368 DEMESVYGVS-KELKHYG-CMA----DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E V+G+S K L C+A D+ G+ G + EA + ++M + D W+ ++
Sbjct: 330 LEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAA 388
Query: 422 CRIHGNVE 429
+GN E
Sbjct: 389 HEQNGNEE 396
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 226/422 (53%), Gaps = 31/422 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF+++ S+N II AH + LF M ++ PD Y+F +++AC+ +
Sbjct: 429 IFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKA 488
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H +V+K G D FV ++++ +YC
Sbjct: 489 LNYGMEVHGRVIKSGMGLDWFVGSAIIDMYC----------------------------- 519
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
K G L A ++ +R+ R VSW ++++G++ Q E A+ F M+ + + PDN
Sbjct: 520 --KCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTY 577
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ L CA L +E GK IH I Q+ D ++++ +VD Y+KCG + + +FE + +
Sbjct: 578 ATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPK 637
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ TW+AM+ A HGLG ++ F M +KP+ + L C+H G VD+
Sbjct: 638 RDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHY 697
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F EM S YG+ +++HY CM DLLGR+G + EALE+I+ MP D +W LLG CR+ G
Sbjct: 698 FREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQG 757
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NVE+AE AA +++L P+D Y +L++VYA A W +V KIR + K+KK GCS I
Sbjct: 758 NVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWI 817
Query: 487 QL 488
Q+
Sbjct: 818 QV 819
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 169/368 (45%), Gaps = 33/368 (8%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
D + A +FN P P+ S+N +I + L A+ +F ++ + D S L
Sbjct: 320 DRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGAL 379
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
ACS + + +H +K G ++ CV
Sbjct: 380 TACSAIKGYLEGIQLHGLAVKCGLDFNI----------CV-------------------- 409
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
NT++D Y K G L A +FD M +DAVSW ++A + Q++ EE + LF +M+
Sbjct: 410 -ANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRST 468
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD+ S + ACA L G +H + + + +D F+ + ++D Y KCG + A
Sbjct: 469 MEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAE 528
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+I E +E+ +WN+++ G + G +L YFSRM++ + PD T L C++
Sbjct: 529 KIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLA 588
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
V+ +++ ++ + + ++ + D+ + G ++++ M +K P D WS +
Sbjct: 589 TVELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAM 646
Query: 419 LGGCRIHG 426
+ HG
Sbjct: 647 ICAYAYHG 654
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 209/485 (43%), Gaps = 71/485 (14%)
Query: 1 MTLNNFIKRCKTIKQIH---QIHAHFLTKGLL---FLSPCHI-----LTTILYAITTFK- 48
+T ++ ++C +K I+ Q HA G + F+S C + + YA F
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 49 -PISSASSPTT--------DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF 99
P S T + +A +F+++P S+N+++ + ++ +F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 100 SQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
++MR + I D+ +F +L+AC+ + + L +H +++GF
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFD---------------- 202
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
DVV+ L+D Y L HA +F MP R++V W ++AGY
Sbjct: 203 ---------------SDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYV 247
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
++D+ E ++L+ M+D + SA +CA L E G +H Y D+
Sbjct: 248 RNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNI 307
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
+ T +D YAKC + A ++F + + NA++VG A +L F + ++
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKE--LKHYGCMA----DLLGRA 393
+ D +++ GAL CS A K + E ++G++ + L C+A D+ +
Sbjct: 368 LDFDEISLSGALTACS-------AIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKC 420
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPED---GGV 448
G + EA + M + D W+ ++ + +VE A +++ ++P+D G V
Sbjct: 421 GALMEACLIFDDMEI-KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSV 479
Query: 449 YKVLA 453
K A
Sbjct: 480 VKACA 484
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 2/252 (0%)
Query: 108 PPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
P +F + + CS L + + + H+Q+ GF+ VFV N L+ YC L A
Sbjct: 35 PTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFN 94
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
+FD++ RDV+S NT+I GY G++ A+ LFD MP RD VSW ++++ Y Q+ ++
Sbjct: 95 VFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKS 154
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
I++F M L+I+ D L AC + + G +H D T LVD
Sbjct: 155 IEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y+ C ++ A IF E+N W+A++ G + L + M++ + T
Sbjct: 215 YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATF 274
Query: 348 LGALVGCSHAGL 359
A C AGL
Sbjct: 275 ASAFRSC--AGL 284
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 123/257 (47%), Gaps = 37/257 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A I + +T S+N+II + NA+ FS+M V + PD +++ +L C+
Sbjct: 527 AEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICAN 586
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + L + IH Q+LKL DV++ ++++ +Y ++D++ +F++ RD V+ + +
Sbjct: 587 LATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAM 646
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I YA E+AI+LF M ++KP++
Sbjct: 647 I-------------------------------CAYAYHGLGEDAIKLFEEMQLQNVKPNH 675
Query: 244 IALVSALSACARLGELEQGKNIHRYIEL-NQIRVDSFLS--TGLVDFYAKCGYINTAIEI 300
+S L ACA +G +++G +H + E+ + +D + + +VD + G +N A+E+
Sbjct: 676 TIFISVLRACAHMGFVDKG--LHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALEL 733
Query: 301 FESSQ-EKNLFTWNAML 316
ES E + W +L
Sbjct: 734 IESMPFEADDVIWRTLL 750
>gi|255641766|gb|ACU21153.1| unknown [Glycine max]
Length = 529
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/484 (32%), Positives = 257/484 (53%), Gaps = 51/484 (10%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA--ITTFKPISSASSPTTDPLSYALSI 67
CKT + + HA + +G H + A I + S+ L +A +
Sbjct: 30 CKTTDNVKKAHAQVVVRG-------HEQDPFIAARLIDKYSHFSN--------LDHARKV 74
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F+N+ P F N +I+ + A+ + MR I P++Y++PF+L+AC +
Sbjct: 75 FDNLSEPDVFCCNVVIKVYANADPFGEALKVHDAMRWRGITPNYYTYPFVLKACGAEGAS 134
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+ IH +K G D+FV N+L+ Y
Sbjct: 135 KKGRVIHEHAVKCGMDLDLFVGNALVAFY------------------------------- 163
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIK-PDNIA 245
K D+ +R++FD +P RD VSW ++V+GY + ++AI LF +M+ D + PD+
Sbjct: 164 AKCQDVEVSRKVFDEIPHRDIVSWNSMVSGYTVNGYVDDAILLFYDMLRDESVGGPDHAT 223
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
V+ L A A+ ++ G IH YI ++ +DS + TGL+ Y+ CGY+ A IF+
Sbjct: 224 FVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGTGLISLYSNCGYVRMARAIFDRIS 283
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++++ W+A++ HGL + +L F +++ A ++PDGV L L CSHAGL+++
Sbjct: 284 DRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGVVFLCLLSACSHAGLLEQGWH 343
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LF+ ME+ YGV+K HY C+ DLLGRAG +E+A+E I+ MP+ ++ LLG CRIH
Sbjct: 344 LFNAMET-YGVAKSEAHYACIVDLLGRAGDLEKAVEFIQSMPIQPGKNIYGALLGACRIH 402
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+E+AE AAE + L P++ G Y +LA +Y +A+RW D ++R+ + +IKK G S
Sbjct: 403 KNMELAELAAEKLFVLDPDNAGRYVILAQMYEDAERWLDAARVRKVVKDKEIKKPIGYSS 462
Query: 486 IQLN 489
++L
Sbjct: 463 VELE 466
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 242/480 (50%), Gaps = 44/480 (9%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C+ + Q+ Q+HA T G + +LY + A +F+
Sbjct: 63 CRNLFQVRQVHAQIATNGAF--RNLAVANKLLYMYVERGALEDAQE-----------LFD 109
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ +S++ I+ + + + +F ++ P D YS P ++RAC L
Sbjct: 110 GMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKC 169
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ IH LK G FV C TL+D Y +
Sbjct: 170 GRLIHCITLKCGLDYGHFV-------------------------------CATLVDMYAR 198
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
+ A Q+F +M RD +W ++ A+S E++ F M + I PD +ALV+
Sbjct: 199 CKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTV 258
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
+ ACA+LG + + K IH YI +D L T ++D YAKCG + +A IF+ Q +N+
Sbjct: 259 VYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNV 318
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
TW+AM+ HG G +L F M+ + I P+ +T + L CSHAGL++E ++ F
Sbjct: 319 ITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSS 378
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M YGV+ ++KHY CM DLLGRAG ++EALEMI+ MP+ D +W LLG CRIH +++
Sbjct: 379 MWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLD 438
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+AE A ++KL+ + G Y +L+++YANA +WED+ K R + G ++K G + I++
Sbjct: 439 LAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVG 498
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 241/428 (56%), Gaps = 7/428 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ + + S++ +I A+ A+ LF M + + PD + LL AC
Sbjct: 313 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACIN 372
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + +H+Q G + ++ V N L+H Y + L DA LFD + RD VS + +
Sbjct: 373 CRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVM 432
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS--DQCEEAIQLFCNMMDLDIKP 241
+ G+ K GD + FR+ + G Y E++ LF M + + P
Sbjct: 433 VGGFAKVGDYMNCFG-----TFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVP 487
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D +A+V+ + ACA+LG + + + I YI+ + ++D L T ++D +AKCG + +A EIF
Sbjct: 488 DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 547
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ +EKN+ +W+AM+ HG GR +L F M+ + I P+ +T++ L CSHAGLV+
Sbjct: 548 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 607
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E + F M Y V ++KHY C+ DLLGRAG ++EAL++I+ M + D +W LG
Sbjct: 608 EGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR H +V +AE AA +++L+P++ G Y +L+++YANA RWEDV K R + ++KK
Sbjct: 668 CRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIP 727
Query: 482 GCSLIQLN 489
G + I+++
Sbjct: 728 GWTWIEVD 735
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 56/364 (15%)
Query: 107 IPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
+ P FY + C L + + +H+Q G + ++ V N L++ Y + L DA
Sbjct: 79 LNPKFYISALV--NCRNL---TQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAY 133
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGD---------------------------------- 192
LFD + RD VS + ++ G+ K GD
Sbjct: 134 GLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLK 193
Query: 193 ---------------LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+ AR LFD+M RD V+W ++ GYA+ + E++ LF M +
Sbjct: 194 NLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE 253
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ PD +A+V+ + ACA+LG + + + I YI+ + ++D L T ++D YAKCG + +A
Sbjct: 254 GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESA 313
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
EIF+ +EKN+ +W+AM+ HG GR +L F M+ + + PD +T+ L C +
Sbjct: 314 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINC 373
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
+ + R++ + SV+G+ + L + +++A + M + D WS
Sbjct: 374 RNLTQVRQVHAQ-ASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCV-RDSVSWSV 431
Query: 418 LLGG 421
++GG
Sbjct: 432 MVGG 435
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/504 (20%), Positives = 197/504 (39%), Gaps = 110/504 (21%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C+ + Q+ Q+HA G+L + ++Y + ++ + A +F+
Sbjct: 91 CRNLTQVRQVHAQASVHGML--ENIVVANKLIYFYSYYRALDDA-----------YGLFD 137
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ + S++ ++ +N F ++ PD Y+ PF++RAC L +L
Sbjct: 138 GMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDL--KNL 195
Query: 130 AQTIHSQVLKLGFICDVFVLNSLM--------------HVYC--------VFHRLRD--- 164
+ +K I D L M + C +F ++R+
Sbjct: 196 QMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGV 255
Query: 165 ---------------------AQELFDEILYR-----DVVSCNTLIDGYVKAGDLAHARQ 198
+ D+ + R DV+ +ID Y K G + AR+
Sbjct: 256 VPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESARE 315
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+FDRM ++ +SW ++A Y Q +A+ LF M+ + PD I L S L AC
Sbjct: 316 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRN 375
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
L Q + +H ++ + + ++ LV FY+ ++ A +F+ ++ +W+ M+ G
Sbjct: 376 LTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 435
Query: 319 LA-----MHGLGRL-----------------------SLVYFSRMIEARIKPDGVTILGA 350
A M+ G SLV F +M E + PD V ++
Sbjct: 436 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTV 495
Query: 351 LVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
+ C+ G + +AR + D +++ + G + M D+ + G +E A E+
Sbjct: 496 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA--------MIDMHAKCGCVESAREIF 547
Query: 404 KKMPMGGDVFVWSGLLGGCRIHGN 427
+M +V WS ++ HG
Sbjct: 548 DRME-EKNVISWSAMIAAYGYHGQ 570
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 26/319 (8%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C+ + Q+ Q+HA G+L + +++ + ++ + A +F+
Sbjct: 373 CRNLTQVRQVHAQASVHGML--QNLIVANKLVHFYSYYRALDDA-----------YGLFD 419
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ + S++ ++ +N F ++ PD Y+ PF A L
Sbjct: 420 GMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESL----- 474
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR----DVVSCNTLID 185
+ ++ + G + D + +++ + A+ + D I + DV+ +ID
Sbjct: 475 --VLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMID 532
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
+ K G + AR++FDRM ++ +SW ++A Y Q +A+ LF M+ I P+ I
Sbjct: 533 MHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT 592
Query: 246 LVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES- 303
LVS L AC+ G +E+G + E +R D T +VD + G ++ A+++ ES
Sbjct: 593 LVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESM 652
Query: 304 SQEKNLFTWNAMLVGLAMH 322
+ EK+ W A L H
Sbjct: 653 TVEKDEGLWGAFLGACRTH 671
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 262/497 (52%), Gaps = 58/497 (11%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+ I++C + QI Q+ +HFLT G H ++ L + + A SP D LS
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAG-------HFQSSFLRSRLLER---CAISPFGD-LS 54
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP------DFYSFPF 116
+A+ IF IP P T +N IIR S P A + M S D + F
Sbjct: 55 FAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSF 114
Query: 117 LLRACSQ-LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
L+AC++ LCS ++ Q +H Q+ + G D +
Sbjct: 115 TLKACARALCSSAMDQ-LHCQINRRGLSADSLL--------------------------- 146
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
C TL+D Y K GDL A +LFD MP RD SW L+AG ++ EA++L+ M
Sbjct: 147 ----CTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
I+ + +V+AL AC+ LG++++G+NI H Y N I +S +D Y+KCG++
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFV 257
Query: 295 NTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A ++FE + +K++ TWN M+ G A+HG +L F ++ + IKPD V+ L AL
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C HAGLV+ +F+ M + GV + +KHYGC+ DLL RAG + EA ++I M M D
Sbjct: 318 CRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+W LLG I+ +VE+AE A+ + ++ + G + +L++VYA RW+DV ++R ++
Sbjct: 377 LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDME 436
Query: 474 AGKIKKNAGCSLIQLNG 490
+ ++KK G S I+ G
Sbjct: 437 SKQVKKIPGLSYIEAKG 453
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 261/490 (53%), Gaps = 20/490 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ RC T+ + Q+HAH + G TTF + AS + L YA
Sbjct: 17 LHRCATLAHLKQLHAHAVVTG-----------RAAAQTTTFHLLRFASLRLS-CLPYARR 64
Query: 67 IFNNIPYPSTFSYNTIIRAHTLF-----SSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRA 120
+F+ P P+ F Y+ ++ A+ +++ LF +M P P+ + +P +LRA
Sbjct: 65 LFDATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRA 124
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ L ++IH K GF F+ SL+ Y + + DA++LFD + R+VVS
Sbjct: 125 ACAI-GVQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRNVVSW 183
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+ GY +AG + A LF+RMP RD +W ++AG Q+ EA+ +F M+D +
Sbjct: 184 TALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFR 243
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + LSAC LG L+ GK IH Y + + S + GL+D Y KCG + A I
Sbjct: 244 PNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWI 303
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F++ ++ L TWN+++ LA+HG ++ F+ M ++PD VT +G L C+H G V
Sbjct: 304 FDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFV 363
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE + F+ M +G+ E++HYGC+ DLL RAG ++A+ I M + D +W LL
Sbjct: 364 DEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLN 423
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI-KK 479
CRIH ++E+AE A +++ L P + +LA++Y+ WE+V K+R+ + KK
Sbjct: 424 ACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKK 483
Query: 480 NAGCSLIQLN 489
GCS I+++
Sbjct: 484 LPGCSWIEVD 493
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 244/428 (57%), Gaps = 2/428 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P+ + +N +IR + A+ L +M + PD + + CS+
Sbjct: 100 ARKLFDEMPHRALVVWNMMIRCYVRCGRYTAAIALAEEMERSGLTPDKVTLVTSVTVCSR 159
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
SL + IH+ + + F + V N+L+ +Y L +A +LF+++ R+++S L
Sbjct: 160 AGDLSLGRRIHAYMDGV-FGFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRNIISWTIL 218
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY AG L AR LF + +D + W ++ Q EEA+ LF M ++PD
Sbjct: 219 VSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDR 278
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+V+ L+ CA LG L+QG+ IH++ +++VD+ L T L+D YAKCG++ ++E+FE
Sbjct: 279 FTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQ 338
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
Q ++ W +++ GLA +G +L F M +++KPD +T +G L C H GLVDE
Sbjct: 339 MQGRDTTAWTSIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSACCHGGLVDEG 398
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF-VWSGLLGGC 422
RK F M+ VY + ++HY C+ +LLGRAGL++EA ++I+ + + D ++ LL C
Sbjct: 399 RKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTAC 458
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+ GNVE++E + + + + V ++++VYA A RWED +++R + IKK AG
Sbjct: 459 KAQGNVEMSERLTKRIGEQGYQIPDVNLLMSNVYATASRWEDAIRVRSKMAHPTIKKTAG 518
Query: 483 CSLIQLNG 490
CSLI++ G
Sbjct: 519 CSLIEVKG 526
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 169/401 (42%), Gaps = 73/401 (18%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
N +IR S + ++ +R + D +++PF+LRA L + H+ +K
Sbjct: 15 NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRAIGVLKLSVEGRKAHAAAMK 74
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
GF D + +SLM +Y + R DV AR+L
Sbjct: 75 TGFWWDAYTASSLMDMYTLLGRA-------------DV------------------ARKL 103
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
FD MP R V W ++ Y + + AI L M + PD + LV++++ C+R G+L
Sbjct: 104 FDEMPHRALVVWNMMIRCYVRCGRYTAAIALAEEMERSGLTPDKVTLVTSVTVCSRAGDL 163
Query: 260 EQGKNIHRYIE--------LNQIRVDSFLSTG----------------------LVDFYA 289
G+ IH Y++ + +D ++ G LV YA
Sbjct: 164 SLGRRIHAYMDGVFGFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRNIISWTILVSGYA 223
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
G ++ A +F EK+L W AM+ HG +L F M R++PD TI+
Sbjct: 224 FAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDRFTIVT 283
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIEEALEMIKK 405
L C++ G +D+ E + V +++K + D+ + G +++++E+ ++
Sbjct: 284 LLTCCANLGALDQG-----EWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQ 338
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV--MKLKPE 444
M G D W+ ++ G +G A E + K+KP+
Sbjct: 339 M-QGRDTTAWTSIICGLATNGQAGRALELFEDMERSKVKPD 378
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 236/430 (54%), Gaps = 4/430 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A S F I +N +I + A LF +M + IPPD ++F LL AC+
Sbjct: 249 ARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACAN 308
Query: 124 LCSHSLAQTIHSQVLKL--GFICDVF--VLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+++H Q ++L F+ + V N+L+ +Y ++ A ++FD + +DVVS
Sbjct: 309 AGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVS 368
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
NT++ GY+++G L +A ++F MP++ +SW +V+GY E+A++LF M D+
Sbjct: 369 WNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDV 428
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KP + A++AC LG L+ GK +H ++ + L+ YA+CG + A
Sbjct: 429 KPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARL 488
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F + +WNAM+ L HG GR +L F +M+ I PD ++ L L C+HAGL
Sbjct: 489 VFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGL 548
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ + F+ ME +G+S HY + DLLGRAG I EA ++IK MP +W +L
Sbjct: 549 VDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAIL 608
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
GCRI+G++E+ AA+ + K+ PE G Y +L++ Y+ A RW D ++R+ + +KK
Sbjct: 609 SGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 668
Query: 480 NAGCSLIQLN 489
GCS I++
Sbjct: 669 EPGCSWIEVG 678
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 188/395 (47%), Gaps = 42/395 (10%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTI----LYAITT--------FKPISSASSPTTDP 60
++ + +HA LT LL P H T+ LY ++ F+ + T+
Sbjct: 38 LRTLRCLHARLLTAALLH-DPSHPHLTLRLLHLYTLSPDLATPAVLFRADPGPVAATSLV 96
Query: 61 LSYALS--------IFNNIPYP--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTV--SIP 108
+YA++ F+++P T +N +I A S AV +F + S+
Sbjct: 97 SAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLR 156
Query: 109 PDFYSFPFLLRACSQLCSHSLAQT----IHSQVLKLGFICDVFVLNSLMHVYCVFHR--- 161
PD YSF LL A Q+ H LA + +H V KLG + V N+L+ +Y
Sbjct: 157 PDDYSFTSLLSAVGQM--HDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGV 214
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
RDA+++ DE+ +D ++ T++ G+V+ GD+ AR F+ + V W +++GY QS
Sbjct: 215 TRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQS 274
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSF- 279
C EA +LF M+ I PD S LSACA G GK++H ++I L V
Sbjct: 275 GMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAA 334
Query: 280 --LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
++ LV Y+K G I A +IF+S K++ +WN +L G G L +R+ +
Sbjct: 335 LPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESG----CLDNAARIFK 390
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
++ + + G H GL ++A KLF++M S
Sbjct: 391 EMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRS 425
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 138/326 (42%), Gaps = 45/326 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A IF +PY S S+ ++ + +A+ LF+QMR+ + P Y++ + A
Sbjct: 382 LDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAA 441
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C +L + + +H+ +++ GF N+L+ +Y ++DA+ +F + D VS
Sbjct: 442 CGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSW 501
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I G H R EA++LF M+ I
Sbjct: 502 NAMISAL---GQHGHGR----------------------------EALELFDQMVAQGIY 530
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYI 294
PD I+ ++ L+AC G ++ G +Y E + D +S G L+D + G I
Sbjct: 531 PDRISFLTILTACNHAGLVDDG---FQYFE--SMERDFGISPGEDHYARLIDLLGRAGRI 585
Query: 295 NTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
A ++ ++ E W A+L G ++G L ++ + + DG IL +
Sbjct: 586 GEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTY 645
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKE 379
+ VD AR ++ GV KE
Sbjct: 646 SAAGRWVDAAR--VRKLMRDRGVKKE 669
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 235/428 (54%), Gaps = 33/428 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ IP S+N II + + A+ LF +M ++ PD + ++ AC+Q
Sbjct: 188 AQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQ 247
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S L + +HS + G ++ ++N+L
Sbjct: 248 SGSIQLGRQVHSWIDDHGLGSNLKIVNAL------------------------------- 276
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G++ A LF + +D +SW T++ GY + +EA+ LF M+ P++
Sbjct: 277 IDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPND 336
Query: 244 IALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ ++S L ACA+LG ++ G+ IH YI+ + + S L T L+D YAKCG I A ++F
Sbjct: 337 VTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 396
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
S + L NAM+ G AMHG + FSRM + I+PD +T +G L CSH+G++D
Sbjct: 397 NSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLD 456
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R++F M Y ++ +L+HYGCM DLLG GL +EA EMI M M D +W LL
Sbjct: 457 LGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKA 516
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C++HGNVE+ E+ A+ ++K++PE+ G Y +L+++YA A RW +V IR L+ +KK
Sbjct: 517 CKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVP 576
Query: 482 GCSLIQLN 489
GCS I+++
Sbjct: 577 GCSSIEID 584
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 223/403 (55%), Gaps = 11/403 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CKT++ + IHA + GL H L + F +S P D L YA
Sbjct: 7 SLLHNCKTLQSLRIIHAQMIKTGL------HNTNYALSRLLEFCILS----PNFDGLPYA 56
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+F I P+ +NT+ R H L S P++A+ L+ M ++ + P+ Y+FPFLL++C++L
Sbjct: 57 ISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKL 116
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
Q IH VLKLG+ D++V SL+ +Y R +DA ++FD +RDVVS LI
Sbjct: 117 KVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALI 176
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY G + A+++FD +P +D VSW +++GYA + +EA+ LF MM ++KPD
Sbjct: 177 TGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDES 236
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ +SACA+ G ++ G+ +H +I+ + + + + L+D Y+KCG + TA +F+
Sbjct: 237 TMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGL 296
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
K++ +WN M+ G L + +L+ F M+ + P+ VT+L L C+ G +D R
Sbjct: 297 SNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGR 356
Query: 365 KLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+ ++ + GV+ + D+ + G IE A ++ M
Sbjct: 357 WIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 226/422 (53%), Gaps = 31/422 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F + S+N II AH + + LF M + PD +++ +L+AC+ +
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 492
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IH++++K D FV +L ID
Sbjct: 493 LNCGMEIHNRIIKSRLGLDSFVGIAL-------------------------------IDM 521
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G + A +L DR+ + VSW +++G++ Q EEA + F M+++ + PDN
Sbjct: 522 YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTY 581
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ L CA L +E GK IH I +++ D+++S+ LVD Y+KCG + IFE +
Sbjct: 582 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 641
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ TWNAM+ G A HGLG +L F M +KP+ T L L C H GLV++
Sbjct: 642 RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 701
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M S YG+ +L+HY C+ D++GR+G + +ALE+I+ MP D +W LL C+IHG
Sbjct: 702 FHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHG 761
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NVE+AE AA +++L+PED Y +L+++YANA W +V K+R+ + +KK GCS I
Sbjct: 762 NVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 821
Query: 487 QL 488
++
Sbjct: 822 EI 823
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 175/400 (43%), Gaps = 43/400 (10%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ LS A +FN++P + SYN II + + A+ +F ++ + D S
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAF 383
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
RAC+ + +H +K + ++
Sbjct: 384 RACAVIKGDLEGLQVHGLSMK-------------------------------SLCQSNIC 412
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
N ++D Y K G L A +F+ M RDAVSW ++A + Q+ E+ + LF M+
Sbjct: 413 VANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG 472
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD S L ACA L G IH I +++ +DSF+ L+D Y+KCG + A
Sbjct: 473 MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAE 532
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
++ + E+ + +WNA++ G ++ + FS+M+E + PD T L C++
Sbjct: 533 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 592
Query: 359 LVDEARKLFDEMESVYGVSKELKH----YGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
V+ +++ ++ + KEL+ + D+ + G +++ + +K P D
Sbjct: 593 TVELGKQIHAQI-----IKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDFVT 646
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVM--KLKPEDGGVYKVL 452
W+ ++ G HG E A E++ +KP VL
Sbjct: 647 WNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 686
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 2/254 (0%)
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
+ P +F + + CS + + H++++ F VFV N L+ +Y L A
Sbjct: 37 ATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFA 96
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE 225
++FD + RD VS N ++ GY GD+ A++LFD MP RD VSW +L++GY +
Sbjct: 97 FKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHR 156
Query: 226 EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
+ I +F M + D L +C+ L + G IH D + L+
Sbjct: 157 KVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALL 216
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
D YAKC ++ +I+ F S EKN +W+A++ G + R L F M +A +
Sbjct: 217 DMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQS 276
Query: 346 TILGALVGCSHAGL 359
T C AGL
Sbjct: 277 TFASVFRSC--AGL 288
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 185/455 (40%), Gaps = 66/455 (14%)
Query: 2 TLNNFIKRCKTIKQI---HQIHAHFLT---KGLLFLSPCHILTTILYAITTFKPISSASS 55
T ++ + C K + Q HA + K +F++ C I I + F
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 56 PTTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
P D +S+ A +F+ +P S+N++I + + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
QM + D +F +L++CS L H IH +K+GF CDV
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDV-------------- 209
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
V+ + L+D Y K L + Q F MP ++ VSW ++AG Q
Sbjct: 210 -----------------VTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQ 252
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
+D ++LF M + S +CA L L G +H + D +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
T +D Y KC ++ A ++F S NL ++NA++VG A G +L F + ++ +
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 372
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS-KELKHYG-CMA----DLLGRAG 394
D V++ GA C A + + L V+G+S K L C+A D+ G+ G
Sbjct: 373 GLDEVSLSGAFRAC--AVIKGDLEGL-----QVHGLSMKSLCQSNICVANAILDMYGKCG 425
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ EA + ++M + D W+ ++ +GN E
Sbjct: 426 ALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEE 459
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 232/430 (53%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P+PST + +I A+ AV + + PD ++ +L A
Sbjct: 122 LHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTA 181
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ + +T+ + G VFV +
Sbjct: 182 CARIADLATGETVWRAAEQEGVAQSVFVATAA---------------------------- 213
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+D YVK G++A AR++FD+M +DAV+WG +V GYA + EA+ LF M +K
Sbjct: 214 ---VDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 270
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD A+ ALSAC RLG L+ G+ R ++ ++ + L T L+D YAKCG A +
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVV 330
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K++ WNAM++GL M G +++ +M ++ +K + T +G L C+H GL+
Sbjct: 331 FQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 390
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ R+ F M +Y +S ++HYGCM DLL RAGL++EA +++ MPM + + LLG
Sbjct: 391 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLG 450
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GC+IH N E+AE + ++ L+P + G Y +L+++Y+N RWED K+R + A ++K
Sbjct: 451 GCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKV 510
Query: 481 AGCSLIQLNG 490
CS ++ G
Sbjct: 511 PACSWVEFEG 520
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 109 PDFYSFPFLLRACSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
P + P L++ S+L H L + +H++ LKL + VL SL+ +Y
Sbjct: 68 PSHLTIPIALKSASRL-PHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLY---------- 116
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
K G L A+++FD MP V W L+ Y + E
Sbjct: 117 ---------------------AKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLRE 155
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
A+ + N ++PD+ V L+ACAR+ +L G+ + R E + F++T VD
Sbjct: 156 AVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVD 215
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
Y KCG + A E+F+ + K+ W AM+ G A +G R +L F M +KPD
Sbjct: 216 LYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 275
Query: 347 ILGALVGCSHAGLVDEARKL-----FDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ GAL C+ G +D R+ +DE V G + + D+ + G EA
Sbjct: 276 VAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA--------LIDMYAKCGSTVEA 327
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ ++M D+ VW+ ++ G + G+ +IA
Sbjct: 328 WVVFQQM-RKKDIIVWNAMILGLGMTGHEKIA 358
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 244/429 (56%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ +A+ +F P+ + Y ++I F S +A+ LF QM + D Y+ +L+A
Sbjct: 75 IDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKA 134
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + + +H VLK G D + L+ +Y L DA+++FD + RDVV+C
Sbjct: 135 CVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVAC 194
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+I G + A ++F+ M RD V W ++ G ++ + +++F M ++
Sbjct: 195 TVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVE 254
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + V LSACA+LG LE G+ IH Y+ + V+ F++ L++ Y++CG I+ A +
Sbjct: 255 PNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQAL 314
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ + K++ T+N+M+ GLA+HG ++ FS M++ R++P+G+T +G L CSH GLV
Sbjct: 315 FDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLV 374
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D ++F+ ME ++G+ E++HYGCM D+LGR G +EEA + I +M + D + LL
Sbjct: 375 DLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLS 434
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C+IH N+ + E A+ + + D G + +L++ YA+ RW ++R ++ G I K
Sbjct: 435 ACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKE 494
Query: 481 AGCSLIQLN 489
GCS I++N
Sbjct: 495 PGCSSIEVN 503
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 132/338 (39%), Gaps = 65/338 (19%)
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
Q+IH +K D FV L+ VYC + + A +LF +V +LIDG+V
Sbjct: 44 QSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSF 103
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G +AI LFC M+ + DN A+ + L
Sbjct: 104 GSYT-------------------------------DAINLFCQMVRKHVLADNYAVTAML 132
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK-------------------- 290
AC L GK +H + + + +D ++ LV+ Y K
Sbjct: 133 KACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVV 192
Query: 291 -----------CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
CG + AIE+F ++ W ++ GL +G L F M
Sbjct: 193 ACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKG 252
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
++P+ VT + L C+ G ++ R + M GV G + ++ R G I+EA
Sbjct: 253 VEPNEVTFVCVLSACAQLGALELGRWIHAYMRKC-GVEVNRFVAGALINMYSRCGDIDEA 311
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHG-NVEIAEAAAE 436
+ + + DV ++ ++GG +HG ++E E +E
Sbjct: 312 QALFDGVRV-KDVSTYNSMIGGLALHGKSIEAVELFSE 348
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 229/423 (54%), Gaps = 8/423 (1%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P+ ++ +++ +H + + LF +MR I + +L L + + I
Sbjct: 234 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 293
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H V+K GF +FV NSL+ +Y + A+ LF EI +++VS N LI Y G
Sbjct: 294 HGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 194 AHARQLF------DRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
A +F D P + VSW ++ G+A Q EEA++LF M +K +++
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 413
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+ S LS CA L L G+ IH ++ + + + + GL++ Y K G +FE +
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 473
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+L +WN M+ G +HGLG ++ F +MI+ +PDGVT + L CSHAGLV E R+
Sbjct: 474 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LFD+M + V +++HY CM DLLGRAGL++EA +++K MP+ + VW LL CR+H
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 593
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N E+AE A + L E G Y +L+++YA + RWED K+R S +KK G S
Sbjct: 594 KNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSW 653
Query: 486 IQL 488
IQ+
Sbjct: 654 IQV 656
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 210/492 (42%), Gaps = 61/492 (12%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N+ +++C QIH+ + G + ++ F +S A
Sbjct: 37 FNDLLQQCSKSHLSQQIHSQIIVTG--SHRSAFLAARVVSVYAGFGLVSDAQR------- 87
Query: 63 YALSIFNNIP---YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+F P + + +N+I+RA+ A+ ++ +MR + + D ++FP ++R
Sbjct: 88 ----VFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIR 143
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC+ + S L +++H V+++GF ++ V N LM +Y R+ DA+++F+ + R VS
Sbjct: 144 ACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS 203
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
NT++ GY D A ++F M + V+W +L++ +A+ Q E ++LF M
Sbjct: 204 WNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 263
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
I AL LS L ++GK IH Y+ F+ L+ Y K G +N
Sbjct: 264 MRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVN 323
Query: 296 TAIEIFESSQEKNLFTWNAMLV-------------------------------------- 317
A +F + KN+ +WNA++
Sbjct: 324 AARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVI 383
Query: 318 -GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
G A G G +L F RM A++K + VTI L C+ + R++ +
Sbjct: 384 GGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMD 443
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
L G + ++ ++G +E + +K+ D+ W+ ++ G IHG E A +
Sbjct: 444 GNILVGNG-LINMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYGIHGLGENAIRTFD 501
Query: 437 HVMKLKPEDGGV 448
++K E GV
Sbjct: 502 QMIKDGFEPDGV 513
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 260/487 (53%), Gaps = 33/487 (6%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
T+K QIH H GL P +L + A S + L+Y+L +F++
Sbjct: 22 TLKTTKQIHTHLYVTGL-HTHPFFFGKLLL---------NCAVSISDHVLNYSLRLFHHF 71
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRA-CSQLCSHSL 129
P P TF YNT+IR+ + S+PL+++ F Q+ R ++ PD +SF F L+ + CS
Sbjct: 72 PNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQ 131
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+HS + GF +FV +L+ +Y A+++FDE+ +VV+ N ++ +
Sbjct: 132 GIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFR 191
Query: 190 AG-------DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
G +F M RD SW T++ G+A+S +A F ++ +P
Sbjct: 192 CGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPS 251
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++L LSACA+ G E GK +H ++E ++ L+D Y+KCG ++ A +F
Sbjct: 252 EVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN 311
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ LAMHG ++ F M E+ ++PDGVT + L CSH+GLV++
Sbjct: 312 --------------ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQ 357
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
LF +M + YG+ ++HYGCM DL GRA +++A E I++MP+ +V +W LLG C
Sbjct: 358 GCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGAC 417
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
IHGN+E+AE + ++ P + G + +L++VYA A +W+DV IRR++ +KK G
Sbjct: 418 SIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPG 477
Query: 483 CSLIQLN 489
S+I+++
Sbjct: 478 WSMIEID 484
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 240/434 (55%), Gaps = 7/434 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + + S+N++I + + A+ +F M + PD + ++ AC+
Sbjct: 206 AQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACAS 265
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + + Q +H++V+K+ + D+ + N+ + +Y R+++A+ +FD + R+V++ +
Sbjct: 266 LSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY A AR +F +M R+ VSW L+AGY Q+ + EEA+ LFC + + P
Sbjct: 326 MVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDS------FLSTGLVDFYAKCGYINT 296
+ + L ACA L +L G H ++ + + S F+ L+D Y KCG +
Sbjct: 386 HYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+F E++ +WNAM++G A +G G +L F M+++ KPD +T++G L C H
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGH 505
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AG V+E R F M +GV+ HY CM DLLGRAG +EEA +I++MP+ D +W
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWG 565
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C++H N+ + + AE + +++ + G Y +L+++YA +W D + +R+ +
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEG 625
Query: 477 IKKNAGCSLIQLNG 490
+ K GCS I++ G
Sbjct: 626 VTKQPGCSWIKIPG 639
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 161/306 (52%), Gaps = 6/306 (1%)
Query: 104 TVSIPPDFYSFPFLLRACSQLCSHSL-AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRL 162
TVS P F LL +C +L ++ + +H+ V+K GF +VF+ N L+ Y L
Sbjct: 17 TVSSP-----FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSL 71
Query: 163 RDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
D ++LFD++ R+V + N+++ G K G L A LF MP RD +W ++V+G+AQ D
Sbjct: 72 EDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHD 131
Query: 223 QCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
+CEEA+ F M + S LSAC+ L ++ +G IH I + D ++ +
Sbjct: 132 RCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGS 191
Query: 283 GLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKP 342
LVD Y+KCG +N A ++F+ ++N+ +WN+++ +G +L F M+E+ ++P
Sbjct: 192 ALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEP 251
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
D VT+ + C+ + +++ + + + ++ D+ + I+EA +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 403 IKKMPM 408
MP+
Sbjct: 312 FDSMPI 317
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 147/308 (47%), Gaps = 36/308 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A S+F ++P ++N+++ A+ F+ M + Y+F L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L + IHS + K + DV++ ++L+ +Y + DAQ++FDE+ R+VVS
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI Y Q+ EA+++F M++ ++
Sbjct: 222 NSLI-------------------------------TCYEQNGPAVEALKVFQVMLESWVE 250
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + L S +SACA L ++ G+ +H R ++++++R D LS VD YAKC I A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF+S +N+ +M+ G AM + + + F++M E + V+ + G + G
Sbjct: 311 IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGE 366
Query: 360 VDEARKLF 367
+EA LF
Sbjct: 367 NEEALSLF 374
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
F+ L+D YAKCG + ++F+ ++N+FTWN+++ GL G + F M E
Sbjct: 56 FIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPER 115
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE- 397
D T + G + +EA F M V L Y + L +GL +
Sbjct: 116 ----DQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFV---LNEYTFASGLSACSGLNDM 168
Query: 398 ----EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
+ +I K P DV++ S L+ GNV A+
Sbjct: 169 NRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQ 207
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 230/431 (53%), Gaps = 34/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F I + ++N +I A+ NA+ F + I P+ +F +L
Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C S L + +H ++K G L S +HV
Sbjct: 524 CKSSDSLELGKWVHFLIMKAG-------LESDLHV------------------------S 552
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N L+ +V GDL A+ LF+ MP RD VSW T++AG+ Q + + A F M + IK
Sbjct: 553 NALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIK 612
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I L+ACA L +G+ +H I D + TGL+ Y KCG I A ++
Sbjct: 613 PDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQV 672
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +KN+++W +M+ G A HG G+ +L F +M + +KPD +T +GAL C+HAGL+
Sbjct: 673 FHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLI 732
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E F M+ + + ++HYGCM DL GRAGL+ EA+E I KM + D VW LLG
Sbjct: 733 EEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG 791
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR-SLDAGKIKK 479
C++H NVE+AE AA+ ++L P D GV+ +L+++YA A W++V K+R+ LD G +KK
Sbjct: 792 ACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKK 851
Query: 480 NAGCSLIQLNG 490
G S I+++G
Sbjct: 852 -PGQSWIEVDG 861
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 207/421 (49%), Gaps = 29/421 (6%)
Query: 67 IFNNIP----YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
I+N+I P F +NT+I + + ++A +F MR D YS+ LL
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMR----EKDVYSWNLLLGGYV 187
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY----RDVV 178
Q + A +H Q+++ D S+++ + +EL++ IL D+
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
LI+ ++K GD+ A ++FD +P RD V+W +++ G A+ + ++A LF M +
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG 307
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD +A VS L AC LEQGK +H ++ + ++ T ++ Y KCG + A+
Sbjct: 308 VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDAL 367
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
E+F+ + +N+ +W AM+ G A HG + ++F++MIE+ I+P+ VT + L CS
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427
Query: 359 LVDEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
+ +++ D +E+ YG ++ + + + G +++A + +K+ +V W+
Sbjct: 428 ALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKISK-QNVVAWNA 484
Query: 418 LLGGCRIHGNVEIAEAAAEHVMK--LKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
++ H + A A + ++K +KP +L +V K SL+ G
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL-----------NVCKSSDSLELG 533
Query: 476 K 476
K
Sbjct: 534 K 534
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 151/286 (52%), Gaps = 6/286 (2%)
Query: 150 NSLMHVYCVFHRLRDAQELFDEI----LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
++L+ + F L D + +++ I + D+ NTLI+ Y K G+ A+Q+FD M
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMRE 173
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
+D SW L+ GY Q EEA +L M+ +KPD VS L+ACA +++G+ +
Sbjct: 174 KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGREL 233
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
+ I D F+ T L++ + KCG I A ++F++ ++L TW +M+ GLA HG
Sbjct: 234 YNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRF 293
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC 385
+ + F RM E ++PD V + L C+H +++ +K+ M+ V G E+
Sbjct: 294 KQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTA 352
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + + G +E+ALE+ + G +V W+ ++ G HG ++ A
Sbjct: 353 ILSMYTKCGSMEDALEVF-DLVKGRNVVSWTAMIAGFAQHGRIDEA 397
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 162/363 (44%), Gaps = 33/363 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL +F+ + + S+ +I A + F++M I P+ +F +L ACS
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ Q I +++ G+ D R+R A L
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSD--------------DRVRTA-----------------L 454
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ Y K G L A ++F+++ ++ V+W ++ Y Q +Q + A+ F ++ IKP++
Sbjct: 455 LSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S L+ C LE GK +H I + D +S LV + CG + +A +F
Sbjct: 515 STFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFND 574
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+++L +WN ++ G HG +++ YF M E+ IKPD +T G L C+ + E
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+L + L G ++ + + G IE+A ++ K+P +V+ W+ ++ G
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLIS-MYTKCGSIEDAHQVFHKLPK-KNVYSWTSMITGYA 692
Query: 424 IHG 426
HG
Sbjct: 693 QHG 695
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 165/369 (44%), Gaps = 35/369 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+N+P ++ ++I A LF +M + PD +F LLRAC+
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + +H+++ ++G+ +++V +++ +Y + DA E+FD + R+VVS +
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G +AQ + +EA F M++ I+P+
Sbjct: 385 IAG-------------------------------FAQHGRIDEAFLFFNKMIESGIEPNR 413
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +S L AC+ L++G+ I +I D + T L+ YAKCG + A +FE
Sbjct: 414 VTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
++N+ WNAM+ H +L F +++ IKP+ T L C + ++
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 364 RKL-FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ + F M++ G+ +L + + G + A + MP D+ W+ ++ G
Sbjct: 534 KWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPK-RDLVSWNTIIAGF 590
Query: 423 RIHGNVEIA 431
HG ++A
Sbjct: 591 VQHGKNQVA 599
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 235/412 (57%), Gaps = 1/412 (0%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
YNTI+ + A+ + +M PD + + A +QL + H V+
Sbjct: 301 YNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVI 360
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
+ G + N ++ +Y + A +FD + + VVS N+L G+++ GD+ A +
Sbjct: 361 RNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWE 420
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+F+++P R+AV W T+++G Q E+AI+LF M IK D + ++ SAC LG
Sbjct: 421 VFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGA 480
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
E K +H YIE N I D L+T LVD +A+CG +A+++F E+++ W A +
Sbjct: 481 PELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGT 540
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
+AM G G + F++M+ +KPD V + L CSH G V++ +F ME +G+S
Sbjct: 541 MAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISP 599
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
+++HYGCM DLLGRAGL+ EA ++IK MPM + VW LL CR+H NVE+A AAE +
Sbjct: 600 QIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERI 659
Query: 439 MKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+L P+ GV+ +L+++YA+A +W DV ++R +L ++K G S +Q+NG
Sbjct: 660 NELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNG 711
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 222/483 (45%), Gaps = 51/483 (10%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
LN ++ CKT+ Q+ Q+H GL I +T+ + I+S S +
Sbjct: 28 LNESLRCCKTLNQLKQLHCQITKNGLD-----QIPSTLTKLVNAGAEIASPESLDYARKA 82
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
+ L + + F N++IR ++ A++L+ +M + + P+ Y+FPF+L C+
Sbjct: 83 FELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCT 142
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
++ + +H V+K+G DVF+ N L+H Y + ++F+ + R+VVS +
Sbjct: 143 KIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTS 202
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
LI GYA+ D+ +EA+ LF M++ I+P
Sbjct: 203 LI-------------------------------CGYARGDRPKEAVSLFFEMVEAGIRPS 231
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++ +V +SACA+L +L+ G+ + YI ++++ + LVD Y KCG I+ A +F+
Sbjct: 232 SVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFD 291
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
++NL +N +L A GL R +L M++ +PD VT+L A+ + A LVD
Sbjct: 292 ECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAI--SASAQLVD- 348
Query: 363 ARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+ ++ Y + L+ + + D+ + G E A + M V W+ L
Sbjct: 349 --LFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMS-NKTVVSWNSL 405
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGV-YKVLADVYANADRWEDVVKIRRSLDAGKI 477
G +G+VE +A V PE V + + +ED +++ R + I
Sbjct: 406 TAGFIRNGDVE----SAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI 461
Query: 478 KKN 480
K +
Sbjct: 462 KAD 464
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 128/302 (42%), Gaps = 32/302 (10%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN IP + +NT+I S +A+ LF +M+ I D + + AC
Sbjct: 418 AWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGY 477
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + LA+ +H+ + K G CD+ RL A L
Sbjct: 478 LGAPELAKWVHTYIEKNGIPCDM--------------RLNTA-----------------L 506
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D + + GD A Q+F++M RD +W + A E A LF M+ +KPD
Sbjct: 507 VDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDV 566
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ V L+AC+ G++EQG +I +E + I +VD + G + A ++ +S
Sbjct: 567 VLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKS 626
Query: 304 -SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
E N W ++L +H ++ R+ E + GV +L + + S D
Sbjct: 627 MPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDV 686
Query: 363 AR 364
AR
Sbjct: 687 AR 688
>gi|125532120|gb|EAY78685.1| hypothetical protein OsI_33787 [Oryza sativa Indica Group]
Length = 493
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/390 (40%), Positives = 234/390 (60%), Gaps = 11/390 (2%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQE 167
P +FPFL RA ++L S LA+ +H+Q L+ G + D+ V NSL+H+Y A+
Sbjct: 60 PSHLTFPFLARAAARLASPRLARAVHAQPLRRGLLPQDLHVSNSLVHMYAACALPGLARR 119
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
LFDEI + VS N L+DGY K DL AR++F RMP RD VSW ++ G + + EA
Sbjct: 120 LFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREA 179
Query: 228 IQLFCNMMDLD------IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
+ +F MM+ ++ +++ +VS L ACA LG+L +G+ +HRY+E + ++ L+
Sbjct: 180 LAVF-EMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLA 238
Query: 282 TGLVDFYAKCGYINTAIEIFESS--QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
T LVD YAKCG I A+E+F + + ++ WNA++ GLA+HG+ R SL F +M A
Sbjct: 239 TSLVDMYAKCGAIVEALEVFHAVPVESTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAG 298
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ PD +T L L C H GLVDEA + F +E+ + ++HY C+ D+LGRAG +EEA
Sbjct: 299 VVPDEITYLCLLSACVHGGLVDEAWRFFRSLEA-QRLRPHVEHYACLVDVLGRAGRLEEA 357
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANA 459
++K MPM V V LL C IHG VE+ EA ++ L+P+ G Y L+++YA A
Sbjct: 358 YGVVKSMPMKPSVSVLGALLNACHIHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVA 417
Query: 460 DRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
RW++ K R+ ++ +KK G S I +
Sbjct: 418 RRWQEAKKARKVMEERGVKKVPGFSEIDVG 447
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 121/296 (40%), Gaps = 16/296 (5%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ IP P+ S+N ++ + A +F++M D S+ ++ C +
Sbjct: 117 ARRLFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQR----DVVSWSAMIDGCVK 172
Query: 124 LCSHSLAQTIHSQV---------LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
H A + + ++ + V VL + H+ + + + L +
Sbjct: 173 CGEHREALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFP 232
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR--DAVSWGTLVAGYAQSDQCEEAIQLFC 232
++ +L+D Y K G + A ++F +P D + W ++ G A E++Q+F
Sbjct: 233 LNIRLATSLVDMYAKCGAIVEALEVFHAVPVESTDVLIWNAVIGGLAVHGMSRESLQMFQ 292
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M + PD I + LSAC G +++ R +E ++R LVD + G
Sbjct: 293 KMEHAGVVPDEITYLCLLSACVHGGLVDEAWRFFRSLEAQRLRPHVEHYACLVDVLGRAG 352
Query: 293 YINTAIEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
+ A + +S K ++ A+L +HG L +++ + DG I
Sbjct: 353 RLEEAYGVVKSMPMKPSVSVLGALLNACHIHGWVELGEAVGRQLVHLQPDHDGRYI 408
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 229/423 (54%), Gaps = 8/423 (1%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P+ ++ +++ +H + + LF +MR I + +L L + + I
Sbjct: 234 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 293
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H V+K GF +FV NSL+ +Y + A+ LF EI +++VS N LI Y G
Sbjct: 294 HGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 194 AHARQLF------DRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
A +F D P + VSW ++ G+A Q EEA++LF M +K +++
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 413
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+ S LS CA L L G+ IH ++ + + + + GL++ Y K G +FE +
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 473
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+L +WN M+ G +HGLG ++ F +MI+ +PDGVT + L CSHAGLV E R+
Sbjct: 474 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LFD+M + V +++HY CM DLLGRAGL++EA +++K MP+ + VW LL CR+H
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 593
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N E+AE A + L E G Y +L+++YA + RWED K+R S +KK G S
Sbjct: 594 KNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSW 653
Query: 486 IQL 488
IQ+
Sbjct: 654 IQV 656
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 210/492 (42%), Gaps = 61/492 (12%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N+ +++C QIH+ + G + ++ F +S A
Sbjct: 37 FNDLLQQCSKSHLSQQIHSQIIVTG--SHRSAFLAARVVSVYAGFGLVSDAQR------- 87
Query: 63 YALSIFNNIP---YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+F P + + +N+I+RA+ A+ ++ +MR + + D ++FP ++R
Sbjct: 88 ----VFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIR 143
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC+ + S L +++H V+++GF ++ V N LM +Y R+ DA+++F+ + R VS
Sbjct: 144 ACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVS 203
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
NT++ GY D A ++F M + V+W +L++ +A+ Q E ++LF M
Sbjct: 204 WNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 263
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
I AL LS L ++GK IH Y+ F+ L+ Y K G +N
Sbjct: 264 MRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVN 323
Query: 296 TAIEIFESSQEKNLFTWNAMLV-------------------------------------- 317
A +F + KN+ +WNA++
Sbjct: 324 AARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVI 383
Query: 318 -GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
G A G G +L F RM A++K + VTI L C+ + R++ +
Sbjct: 384 GGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMD 443
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
L G + ++ ++G +E + +K+ D+ W+ ++ G IHG E A +
Sbjct: 444 GNILVGNG-LINMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYGIHGLGENAIRTFD 501
Query: 437 HVMKLKPEDGGV 448
++K E GV
Sbjct: 502 QMIKDGFEPDGV 513
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 243/479 (50%), Gaps = 45/479 (9%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
K IK Q+HA G F + LY + D LS A +F+
Sbjct: 89 KAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVC-------------DSLSSARLLFDR 135
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
IP + F +N +IR + AV L+ QM + PD ++FPF+L+AC+ L +
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ IH V++ G+ DVFV +L ID Y K
Sbjct: 196 REIHEHVVQTGWEKDVFVGAAL-------------------------------IDMYAKC 224
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G + AR++FD++ RDAV W +++A Y+Q+ + + L M+ ++P LV+A+
Sbjct: 225 GCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAI 284
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
SA A L QG+ +H + + T LVD YAKCG + A +FE K +
Sbjct: 285 SASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVV 344
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+WNAM+ G AMHG +L F M KPD +T +G L CSH GL++E F+ M
Sbjct: 345 SWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGWMFFETM 403
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
Y + ++HY CM DLLG +G ++EA +I +M + D VW LL C+IH NVE+
Sbjct: 404 IRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVEL 463
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
E A E +++L+P+D G Y +L+++YA A +WE V K+R+ + ++KK+ CS I++
Sbjct: 464 GEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVK 522
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 178/430 (41%), Gaps = 63/430 (14%)
Query: 22 HFLTKGLLFLSPCHILTTILYAITTFKPIS-SASSPTTDPLSYALSIFNNIPYPSTFSYN 80
HF K L SPC L+++L T F +S SP S A NN
Sbjct: 4 HFKRK-LKRPSPCSALSSLLKP-TFFASLSLQYQSPNPSFTSSAPQFDNN---------Q 52
Query: 81 TIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKL 140
T ++A S+P + + P + ++ LL++C + + +H+QV
Sbjct: 53 THLKAIPSCSNP--------HAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLA 104
Query: 141 GFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLF 200
GF D + L+++YCV L A+ LFD I ++ N LI GY G
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNG--------- 155
Query: 201 DRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELE 260
P+ E A+QL+ M D + PDN L ACA L +E
Sbjct: 156 ---PY-------------------EAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIE 193
Query: 261 QGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLA 320
G+ IH ++ D F+ L+D YAKCG + +A E+F+ ++ WN+ML +
Sbjct: 194 HGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYS 253
Query: 321 MHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF-----DEMESVYG 375
+G L S M+ ++P T++ A+ + + + R+L E ES
Sbjct: 254 QNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDK 313
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
V L D+ + G + A + +++ + V W+ ++ G +HG+ A
Sbjct: 314 VKTAL------VDMYAKCGSVRVARNLFERLGV-KRVVSWNAMITGYAMHGHATEALDLF 366
Query: 436 EHVMKLKPED 445
E + ++ D
Sbjct: 367 EEMNRVAKPD 376
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 230/431 (53%), Gaps = 34/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F I + ++N +I A+ NA+ F + I P+ +F +L
Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C S L + +H ++K G L S +HV
Sbjct: 524 CKSSDSLELGKWVHFLIMKAG-------LESDLHV------------------------S 552
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N L+ +V GDL A+ LF+ MP RD VSW T++AG+ Q + + A F M + IK
Sbjct: 553 NALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIK 612
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I L+ACA L +G+ +H I D + TGL+ Y KCG I A ++
Sbjct: 613 PDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQV 672
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +KN+++W +M+ G A HG G+ +L F +M + +KPD +T +GAL C+HAGL+
Sbjct: 673 FHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLI 732
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E F M+ + + ++HYGCM DL GRAGL+ EA+E I KM + D VW LLG
Sbjct: 733 EEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG 791
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR-SLDAGKIKK 479
C++H NVE+AE AA+ ++L P D GV+ +L+++YA A W++V K+R+ LD G +KK
Sbjct: 792 ACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKK 851
Query: 480 NAGCSLIQLNG 490
G S I+++G
Sbjct: 852 -PGQSWIEVDG 861
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 206/421 (48%), Gaps = 29/421 (6%)
Query: 67 IFNNIP----YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
I+N+I P F NT+I + + ++A +F MR D YS+ LL
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMR----EKDVYSWNLLLGGYV 187
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY----RDVV 178
Q + A +H Q+++ D S+++ + +EL++ IL D+
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
LI+ ++K GD+ A ++FD +P RD V+W +++ G A+ + ++A LF M +
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG 307
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD +A VS L AC LEQGK +H ++ + ++ T ++ Y KCG + A+
Sbjct: 308 VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDAL 367
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
E+F+ + +N+ +W AM+ G A HG + ++F++MIE+ I+P+ VT + L CS
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427
Query: 359 LVDEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
+ +++ D +E+ YG ++ + + + G +++A + +K+ +V W+
Sbjct: 428 ALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKISK-QNVVAWNA 484
Query: 418 LLGGCRIHGNVEIAEAAAEHVMK--LKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
++ H + A A + ++K +KP +L +V K SL+ G
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL-----------NVCKSSDSLELG 533
Query: 476 K 476
K
Sbjct: 534 K 534
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 151/286 (52%), Gaps = 6/286 (2%)
Query: 150 NSLMHVYCVFHRLRDAQELFDEI----LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
++L+ + F L D + +++ I + D+ NTLI+ Y K G+ A+Q+FD M
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMRE 173
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
+D SW L+ GY Q EEA +L M+ +KPD VS L+ACA +++G+ +
Sbjct: 174 KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGREL 233
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
+ I D F+ T L++ + KCG I A ++F++ ++L TW +M+ GLA HG
Sbjct: 234 YNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRF 293
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC 385
+ + F RM E ++PD V + L C+H +++ +K+ M+ V G E+
Sbjct: 294 KQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTA 352
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + + G +E+ALE+ + G +V W+ ++ G HG ++ A
Sbjct: 353 ILSMYTKCGSMEDALEVF-DLVKGRNVVSWTAMIAGFAQHGRIDEA 397
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 162/363 (44%), Gaps = 33/363 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL +F+ + + S+ +I A + F++M I P+ +F +L ACS
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ Q I +++ G+ D R+R A L
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSD--------------DRVRTA-----------------L 454
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ Y K G L A ++F+++ ++ V+W ++ Y Q +Q + A+ F ++ IKP++
Sbjct: 455 LSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S L+ C LE GK +H I + D +S LV + CG + +A +F
Sbjct: 515 STFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFND 574
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+++L +WN ++ G HG +++ YF M E+ IKPD +T G L C+ + E
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+L + L G ++ + + G IE+A ++ K+P +V+ W+ ++ G
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLIS-MYTKCGSIEDAHQVFHKLPK-KNVYSWTSMIAGYA 692
Query: 424 IHG 426
HG
Sbjct: 693 QHG 695
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 165/369 (44%), Gaps = 35/369 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+N+P ++ ++I A LF +M + PD +F LLRAC+
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + +H+++ ++G+ +++V +++ +Y + DA E+FD + R+VVS +
Sbjct: 325 PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAM 384
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G +AQ + +EA F M++ I+P+
Sbjct: 385 IAG-------------------------------FAQHGRIDEAFLFFNKMIESGIEPNR 413
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +S L AC+ L++G+ I +I D + T L+ YAKCG + A +FE
Sbjct: 414 VTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
++N+ WNAM+ H +L F +++ IKP+ T L C + ++
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 364 RKL-FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ + F M++ G+ +L + + G + A + MP D+ W+ ++ G
Sbjct: 534 KWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPK-RDLVSWNTIIAGF 590
Query: 423 RIHGNVEIA 431
HG ++A
Sbjct: 591 VQHGKNQVA 599
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 233/423 (55%), Gaps = 31/423 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F + + S+N II A + + ++M + PD +++ +L+AC+ L S
Sbjct: 410 VFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQS 469
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+H + +K G D FV +T++D
Sbjct: 470 LEYGLVVHGKAIKSGLGLDAFV-------------------------------SSTVVDM 498
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G + A++L DR+ ++ VSW ++++G++ + Q EEA + F M+D+ +KPD+
Sbjct: 499 YCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTY 558
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ L CA L +E GK IH I ++ D ++S+ LVD YAKCG + ++ +FE +++
Sbjct: 559 ATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARK 618
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+ +WNAM+ G A+HG G +L F RM A + P+ T + L CSH GL+D+ +
Sbjct: 619 LDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQY 678
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M S Y + +L+H+ CM D+LGR+ +EALE I+ MP+ D VW LL C+I
Sbjct: 679 FHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQ 738
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
+VE+AE AA +V++L P+D VY +L++VYA + +W DV + RR + G+++K GCS I
Sbjct: 739 DVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWI 798
Query: 487 QLN 489
++
Sbjct: 799 EVQ 801
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 141/349 (40%), Gaps = 43/349 (12%)
Query: 113 SFPFLLRACSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
+F L + C+ +L Q H+++L GF+ FV N L+ +Y A +FD
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 171 EILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
+ +RD VS NT++ YV AGD A LF MP D VSW TL++GY Q ++ L
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
M + D L L +C L +L G IH + D + LVD Y K
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMH----------------GLGRLSLVYFSR 334
C ++ A+ F E+N +W A + G + GLG Y S
Sbjct: 199 CRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASA 258
Query: 335 MIEARIKP-------------DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
P V +VG + + +A L D + G L
Sbjct: 259 FRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIG----LP 314
Query: 382 HYG---CMADLLG--RAGLIEEALEMIKKMPMGG---DVFVWSGLLGGC 422
H+ C A ++G R GL EA+++ + M G DV SG+ C
Sbjct: 315 HHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSAC 363
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 125/292 (42%), Gaps = 31/292 (10%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A S+F +P P S+NT+I + N+V L +M + D + LL++C
Sbjct: 104 AASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGG 163
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L +L IH+ +K G L DV + + L
Sbjct: 164 LDDLALGVQIHALAVKTG-------------------------------LETDVRAGSAL 192
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K L A + F M R++VSWG +AG Q++Q ++LF M L +
Sbjct: 193 VDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQ 252
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
A SA +CA + L + +H + N D + T +VD YAK G + A F
Sbjct: 253 PAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIG 312
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
N+ T NAM+VGL GLG ++ F M + + D +++ G C+
Sbjct: 313 LPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACA 364
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 159/360 (44%), Gaps = 33/360 (9%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F +P+ + + N ++ A+ LF M + D S + AC+++ +
Sbjct: 310 FIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGY 369
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+H +K GF DV V N+++ +Y C L++ Y
Sbjct: 370 FQGLQVHCLAVKSGFDVDVCVRNAILDLYG---------------------KCKALVEAY 408
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
+ +F M RD+VSW ++A Q++ E+ I M+ ++PD+
Sbjct: 409 L----------VFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYG 458
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L ACA L LE G +H + + +D+F+S+ +VD Y KCG I A ++ + +
Sbjct: 459 SVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQ 518
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
L +WN+++ G ++ + +FS M++ +KPD T L C++ ++ +++
Sbjct: 519 ELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIH 578
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
++ + E + D+ + G + ++L M +K D W+ ++ G +HG
Sbjct: 579 GQIIKQEMLGDEYIS-STLVDMYAKCGNMPDSLLMFEK-ARKLDFVSWNAMICGYALHGQ 636
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 168/401 (41%), Gaps = 38/401 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L AL F+ + ++ S+ I + LF QM+ + + ++ R+
Sbjct: 202 LDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRS 261
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + S A+ +H+ +K F D V +++ VY L DA+ F + + +V +C
Sbjct: 262 CAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETC 321
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ G V+ G A A QLF M R V +
Sbjct: 322 NAMMVGLVRTGLGAEAMQLFQFMT-RSGVGF----------------------------- 351
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D I+L SACA + QG +H + VD + ++D Y KC + A +
Sbjct: 352 -DVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLV 410
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++++ +WNA++ L + ++ + + M+ + ++PD T L C AGL
Sbjct: 411 FQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKAC--AGLQ 468
Query: 361 DEARKLFDEMESVY-GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
L +++ G+ + + D+ + G I EA ++ ++ G ++ W+ ++
Sbjct: 469 SLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIG-GQELVSWNSII 527
Query: 420 GGCRIHGNVEIAEAAAEHV--MKLKPEDGGVYKVLADVYAN 458
G + E A+ + M +KP D Y + D AN
Sbjct: 528 SGFSLTKQSEEAQRFFSEMLDMGVKP-DHFTYATVLDTCAN 567
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 31/202 (15%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A + + I S+N+II +L A FS+M + + PD +++ +L
Sbjct: 505 ITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDT 564
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + L + IH Q++K + D ++ ++L+ +Y + D+ +F++ D VS
Sbjct: 565 CANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSW 624
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GY G Q EA+++F M ++
Sbjct: 625 NAMICGYALHG-------------------------------QGLEALEMFERMQRANVV 653
Query: 241 PDNIALVSALSACARLGELEQG 262
P++ V+ L AC+ +G L+ G
Sbjct: 654 PNHATFVAVLRACSHVGLLDDG 675
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 233/425 (54%), Gaps = 8/425 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A F+++ S+NTII + A LF + S D +++ ++ Q
Sbjct: 233 ARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE----SPVHDVFTWTAMVSGYIQ 288
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A+ + ++ + + N+++ Y R+ A+ELFD + R+V + NT+
Sbjct: 289 NRMVEEARELFDRMPERNEVS----WNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTM 344
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY + G ++ A+ LFD+MP RD VSW ++AGY+QS EA++LF M + +
Sbjct: 345 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNR 404
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ SALS CA + LE GK +H + F+ L+ Y KCG I A ++F+
Sbjct: 405 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 464
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K++ +WN M+ G + HG G +L +F M +KPD T++ L CSH GLVD+
Sbjct: 465 MAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 524
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+ F M YGV +HY CM DLLGRAGL+EEA ++K MP D +W LLG R
Sbjct: 525 RQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASR 584
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+HGN E+AE AA+ + ++PE+ G+Y +L+++YA++ RW DV K+R + +KK G
Sbjct: 585 VHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGY 644
Query: 484 SLIQL 488
S I++
Sbjct: 645 SWIEI 649
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 177/402 (44%), Gaps = 34/402 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F +P S+NTI+ + +A +F +M + S+ LL A
Sbjct: 137 LGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRM----PEKNDVSWNALLSA 192
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
Q A + + N L+ + ++ +A++ FD + RDVVS
Sbjct: 193 YVQNSKLEEACVLFGSRENWALVS----WNCLLGGFVKKKKIVEARQFFDSMKVRDVVSW 248
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT+I GY + G++ ARQLFD P D +W +V+GY Q+ EEA +LF
Sbjct: 249 NTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELF--------- 299
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST--GLVDFYAKCGYINTAI 298
D + + +S A L QG+ + EL + +ST ++ YA+CG I+ A
Sbjct: 300 -DRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 358
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ +++ +W AM+ G + G +L F M + + + AL C+
Sbjct: 359 NLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVV 418
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMAD-----LLGRAGLIEEALEMIKKMPMGGDVF 413
++ ++L + K GC + + G IEEA ++ K+M G D+
Sbjct: 419 ALELGKQLHGRL------VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIV 471
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPEDGGVYKVLA 453
W+ ++ G HG E A E + + LKP+D + VL+
Sbjct: 472 SWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLS 513
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 164/373 (43%), Gaps = 59/373 (15%)
Query: 50 ISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP 109
++ +S T S AL +F +P S+ SYN +I + A +LF +M P
Sbjct: 64 VAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM------P 117
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
+ D+ N ++ Y L A+ELF
Sbjct: 118 ER---------------------------------DLVSWNVMIKGYVRNRNLGKARELF 144
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
+ + RDV S NT++ GY + G + AR++FDRMP ++ VSW L++ Y Q+ + EEA
Sbjct: 145 ERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACV 204
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS-TGLVDFY 288
LF + +N ALVS C G +++ K + + ++V +S ++ Y
Sbjct: 205 LFGSR-------ENWALVSW--NCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGY 255
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
A+ G I+ A ++F+ S ++FTW AM+ G + + + F RM E + V+
Sbjct: 256 AQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWN 311
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L G V+ A++LFD M + + + M + G I EA + KMP
Sbjct: 312 AMLAGYVQGERVEMAKELFDVMP-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 366
Query: 409 GGDVFVWSGLLGG 421
D W+ ++ G
Sbjct: 367 -RDPVSWAAMIAG 378
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 143/312 (45%), Gaps = 20/312 (6%)
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
S+ + + Q ++ L D+ N + Y R +A +F + VS N
Sbjct: 35 SKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYN 94
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+I GY++ G+ AR LFD MP RD VSW ++ GY ++ +A +LF M + D+
Sbjct: 95 AMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCS 154
Query: 242 DNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
N + LS A+ G ++ + + R E N + ++ LS Y + + A +
Sbjct: 155 WN----TILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSA-----YVQNSKLEEACVL 205
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F S + L +WN +L G + + +V + ++ D V+ + G + G +
Sbjct: 206 FGSRENWALVSWNCLLGGF----VKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEI 261
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DEAR+LFDE V+ V + M + ++EEA E+ +MP +V W+ +L
Sbjct: 262 DEARQLFDE-SPVHDVFT----WTAMVSGYIQNRMVEEARELFDRMPERNEV-SWNAMLA 315
Query: 421 GCRIHGNVEIAE 432
G VE+A+
Sbjct: 316 GYVQGERVEMAK 327
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 142/327 (43%), Gaps = 41/327 (12%)
Query: 24 LTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTII 83
+ K L + PC ++T IT + +S A ++F+ +P S+ +I
Sbjct: 325 MAKELFDVMPCRNVSTWNTMITGYAQCGK--------ISEAKNLFDKMPKRDPVSWAAMI 376
Query: 84 RAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI 143
++ A+ LF M + SF L C+ + + L + +H +++K G+
Sbjct: 377 AGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 436
Query: 144 CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRM 203
FV N+L+ +YC + +A +LF E+ +D+VS NT+I GY + G
Sbjct: 437 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG------------ 484
Query: 204 PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGK 263
+G EEA++ F +M +KPD+ +V+ LSAC+ G +++G+
Sbjct: 485 -------FG------------EEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 525
Query: 264 N-IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAM 321
H + +R +S +VD + G + A + ++ E + W +L +
Sbjct: 526 QYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRV 585
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTIL 348
HG L+ ++ + G+ +L
Sbjct: 586 HGNTELAETAADKIFAMEPENSGMYVL 612
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 249/446 (55%), Gaps = 2/446 (0%)
Query: 44 ITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR 103
+ ++ I A T D L A IF+ +P + S++ +I ++ A+ LFS+M
Sbjct: 250 VVSWTAILDAYVETGD-LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 104 TVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR 163
P+ F L A + L + S IH V K+G DVF+ +SL+ +YC +
Sbjct: 309 QEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPD 368
Query: 164 DAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQ 223
D + +FD IL ++VV N+++ GY G L +LF+ +P ++ SWGT++AGY +++Q
Sbjct: 369 DGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQ 428
Query: 224 CEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG 283
CE+ +++F ++ P+ S L ACA + L++G N+H I I+ D F+ T
Sbjct: 429 CEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTA 488
Query: 284 LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKP 342
L D YAKCG I ++ ++FE EKN +W M+ GLA G SL+ F M + + P
Sbjct: 489 LTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAP 548
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
+ + +L L CSH GLVD+ F+ ME VYG+ + KHY C+ DLL R+G + EA E
Sbjct: 549 NELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEF 608
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRW 462
I+ +P + W+ LL GC+ + + +IAE A+ + +L + Y +L+++YA+A RW
Sbjct: 609 IRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRW 668
Query: 463 EDVVKIRRSLDAGKIKKNAGCSLIQL 488
DV IR+ + +KK+ GCS +++
Sbjct: 669 IDVSNIRKLMREKGLKKSGGCSWVEV 694
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI-- 67
C+ +I QI F L+ +S C I + + + P + +S++ I
Sbjct: 69 CRKFAEIDQIVKEFDGSDLV-VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISG 127
Query: 68 -------------FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
F P+ + S+ I A+ LF ++ + P+ +F
Sbjct: 128 LMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTF 187
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
++RAC +L L +I V+K GF + V NSL+ + + A+ +FD +
Sbjct: 188 TSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEK 247
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RDVVS ++D YV+ GDL AR++FD MP R+ +SW ++A Y+QS EEA++LF M
Sbjct: 248 RDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKM 307
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ KP+ LSA A L L G NIH ++ I D F+ + L+D Y KCG
Sbjct: 308 VQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKP 367
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
+ +F+ EKN+ WN+M+ G +++G
Sbjct: 368 DDGRLVFDLILEKNVVCWNSMVGGYSING 396
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 143/313 (45%), Gaps = 33/313 (10%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+ V N ++ Y + L A+ LFDE+ R+ VS + LI G +K G + + F+R P
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
F++ VSW ++G+ ++ EA++LF +++ ++P+++ S + AC LG+ G +
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 265 I---------HRYIELNQI----------------------RVDSFLSTGLVDFYAKCGY 293
I Y+ ++ + D T ++D Y + G
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A IF+ E+N +W+AM+ + G +L FS+M++ KP+ L
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
+ + + + + G+ K++ + DL + G ++ ++ + + +V
Sbjct: 326 LASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVV 383
Query: 414 VWSGLLGGCRIHG 426
W+ ++GG I+G
Sbjct: 384 CWNSMVGGYSING 396
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/478 (32%), Positives = 250/478 (52%), Gaps = 43/478 (8%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+++ Q HA L GL S C + L A S + YA SIF +
Sbjct: 1 MEEFKQSHARILKXGLFXDSFC---ASNLVATCALSDWGS--------MDYACSIFRQMD 49
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P +F +NT++R H + A++ + +M + PD +++P LL+AC++L +
Sbjct: 50 EPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQ 109
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H+ +LKLG DVFV NSL I Y K G+
Sbjct: 110 VHAHILKLGLENDVFVQNSL-------------------------------ISMYGKCGE 138
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI-KPDNIALVSALS 251
+ +F++M R SW L+ +A + ++L +M + + + LVS LS
Sbjct: 139 IGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLS 198
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
AC LG L+ G+++H ++ N ++ + T L++ Y KCG + + +F+ +KN +
Sbjct: 199 ACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLS 258
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
++ M+ GLAMHG GR L F+ M+E ++PD + +G L CSHAGLV E + F+ M+
Sbjct: 259 YSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMK 318
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+G+ ++HYGCM DL+GRAG I+EALE+IK MPM + +W LL ++H N++
Sbjct: 319 LEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAG 378
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
E AA+ + KL + Y VL+++YA A RWEDV + R ++ + + + G SL+++
Sbjct: 379 EIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVK 436
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 241/431 (55%), Gaps = 13/431 (3%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ + YA IF++ P+ + Y +I L + + L+ QM S+ PD Y+ +L
Sbjct: 78 NSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVL 137
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+AC + + +HSQVLKLG + + L+ +Y DA+ +FDE+ RDVV
Sbjct: 138 KACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVV 197
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+ +I+ Y G +D V W ++ G ++ + A+++F NM D
Sbjct: 198 ASTVMINYYFDHG-------------IKDTVCWTAMIDGLVRNGESNRALEVFRNMQRED 244
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ P+ + +V LSAC+ LG L+ G+ + Y++ ++I ++ F+ L++ Y++CG I+ A
Sbjct: 245 VMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQ 304
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE +EKN+ T+N+M++G A+HG ++ F +I+ P VT +G L CSH G
Sbjct: 305 RVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGG 364
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L + ++F M YG+ +++HYGCM DLLGR G +EEA I+ M + D + L
Sbjct: 365 LAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGAL 424
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+IHGN+E+AE A+ ++ K D G Y +L++ Y+++ +W++ ++R ++ I+
Sbjct: 425 LSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIE 484
Query: 479 KNAGCSLIQLN 489
K GCS I++N
Sbjct: 485 KEPGCSSIEVN 495
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 143/354 (40%), Gaps = 59/354 (16%)
Query: 100 SQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
S + + P F LL+ C ++ I++++++ D FV+ L+ V
Sbjct: 21 SGTKPKNTPNRRRHFISLLQNCKH---NNQIPPIYAKIIRNHHHQDPFVVFELLRV---- 73
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
C+ L + +A ++F + + L+ G
Sbjct: 74 --------------------CSNL-------NSIGYASKIFSHTQNPNVYLYTALIDGLV 106
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
S + I L+ M++ + PD+ A+ S L AC L++G+ +H + + +
Sbjct: 107 LSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRS 166
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFT------------------WNAMLVGLAM 321
+ L++ Y KCG A +F+ E+++ W AM+ GL
Sbjct: 167 IRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVR 226
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
+G +L F M + P+ VTI+ L CS G + R + M+ EL
Sbjct: 227 NGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDK---HRIELN 283
Query: 382 HY--GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG-NVEIAE 432
H+ G + ++ R G I+EA + ++M +V ++ ++ G +HG +VE E
Sbjct: 284 HFVGGALINMYSRCGDIDEAQRVFEQMKE-KNVITYNSMIMGFALHGKSVEAVE 336
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 232/430 (53%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P+PST + +I A+ AV + + PD ++ +L A
Sbjct: 577 LHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTA 636
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ + +T+ + G VFV +
Sbjct: 637 CARIADLATGETVWRAAEQEGVAQSVFVATAA---------------------------- 668
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+D YVK G++A AR++FD+M +DAV+WG +V GYA + EA+ LF M +K
Sbjct: 669 ---VDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 725
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD A+ ALSAC RLG L+ G+ R ++ ++ + L T L+D YAKCG A +
Sbjct: 726 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVV 785
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K++ WNAM++GL M G +++ +M ++ +K + T +G L C+H GL+
Sbjct: 786 FQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 845
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ R+ F M +Y +S ++HYGCM DLL RAGL++EA +++ MPM + + LLG
Sbjct: 846 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLG 905
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GC+IH N E+AE + ++ L+P + G Y +L+++Y+N RWED K+R + A ++K
Sbjct: 906 GCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKV 965
Query: 481 AGCSLIQLNG 490
CS ++ G
Sbjct: 966 PACSWVEFEG 975
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 149/334 (44%), Gaps = 50/334 (14%)
Query: 109 PDFYSFPFLLRACSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
P + P L++ S+L H L + +H++ LKL + VL SL+ +Y
Sbjct: 523 PSHLTIPIALKSASRL-PHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLY---------- 571
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
K G L A+++FD MP V W L+ Y + E
Sbjct: 572 ---------------------AKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLRE 610
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
A+ + N ++PD+ V L+ACAR+ +L G+ + R E + F++T VD
Sbjct: 611 AVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVD 670
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
Y KCG + A E+F+ + K+ W AM+ G A +G R +L F M +KPD
Sbjct: 671 LYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 730
Query: 347 ILGALVGCSHAGLVDEARKL-----FDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ GAL C+ G +D R+ +DE V G + + D+ + G EA
Sbjct: 731 VAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA--------LIDMYAKCGSTVEA 782
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+ ++M D+ VW+ ++ G + G+ +IA A
Sbjct: 783 WVVFQQM-RKKDIIVWNAMILGLGMTGHEKIAFA 815
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 234/425 (55%), Gaps = 8/425 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A F+++ S+NTII + A LF + S D +++ ++ Q
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQ 293
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A+ + ++ + + N+++ Y R+ A+ELFD + R+V + NT+
Sbjct: 294 NRMVEEARELFDKMPERNEVS----WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY + G ++ A+ LFD+MP RD VSW ++AGY+QS EA++LF M + +
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ SALS CA + LE GK +H + F+ L+ Y KCG I A ++F+
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K++ +WN M+ G + HG G ++L +F M +KPD T++ L CSH GLVD+
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+ F M YGV +HY CM DLLGRAGL+E+A ++K MP D +W LLG R
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+HGN E+AE AA+ + ++PE+ G+Y +L+++YA++ RW DV K+R + +KK G
Sbjct: 590 VHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGY 649
Query: 484 SLIQL 488
S I++
Sbjct: 650 SWIEI 654
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 187/424 (44%), Gaps = 53/424 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+N +I+ + + A LF M D S+ +L +Q
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQ 169
Query: 124 LCSHSLAQTIHSQV-----LKLGFICDVFVLNSLMHVYCVFHRLRD-------------- 164
A+++ ++ + + +V NS M C+ + R+
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 165 --------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
A++ FD + RDVVS NT+I GY ++G + ARQLFD P +D +W +V+
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
GY Q+ EEA +LF M + + ++ + L+ + +E K + + +
Sbjct: 290 GYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 277 DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
+ + TG YA+CG I+ A +F+ +++ +W AM+ G + G +L F +M
Sbjct: 346 WNTMITG----YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD-----LLG 391
+ + + AL C+ ++ ++L + K GC +
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRL------VKGGYETGCFVGNALLLMYC 455
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPEDGGVY 449
+ G IEEA ++ K+M G D+ W+ ++ G HG E+A E + + LKP+D +
Sbjct: 456 KCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 450 KVLA 453
VL+
Sbjct: 515 AVLS 518
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 29/304 (9%)
Query: 127 HSLAQTIHSQV--------LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
HSL + +Q+ LK G D+ N + Y R +A +F + V
Sbjct: 38 HSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV 96
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N +I GY++ G+ AR+LFD MP RD VSW ++ GY ++ +A +LF M + D
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD 156
Query: 239 IKPDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ N + LS A+ G ++ +++ R E N + ++ LS Y + + A
Sbjct: 157 VCSWN----TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA-----YVQNSKMEEA 207
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+S + L +WN +L G + + +V + ++ D V+ + G + +
Sbjct: 208 CMLFKSRENWALVSWNCLLGGF----VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
G +DEAR+LFDE +++ + M + ++EEA E+ KMP +V W+
Sbjct: 264 GKIDEARQLFDE-----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV-SWNA 317
Query: 418 LLGG 421
+L G
Sbjct: 318 MLAG 321
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 140/327 (42%), Gaps = 41/327 (12%)
Query: 24 LTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTII 83
+ K L + PC ++T IT + +S A ++F+ +P S+ +I
Sbjct: 330 MAKELFDVMPCRNVSTWNTMITGYAQCGK--------ISEAKNLFDKMPKRDPVSWAAMI 381
Query: 84 RAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI 143
++ A+ LF QM + SF L C+ + + L + +H +++K G+
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 144 CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRM 203
FV N+L+ +YC + +A +LF E+ +D+VS NT+I
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI------------------- 482
Query: 204 PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGK 263
AGY++ E A++ F +M +KPD+ +V+ LSAC+ G +++G+
Sbjct: 483 ------------AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 264 N-IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAM 321
+ + + +S +VD + G + A + ++ E + W +L +
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTIL 348
HG L+ ++ + G+ +L
Sbjct: 591 HGNTELAETAADKIFAMEPENSGMYVL 617
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 247/480 (51%), Gaps = 70/480 (14%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+ ++ + AV F M + + Y+FP +L ACS + + + +H ++
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292
Query: 139 KLGFICDVFV-------------------------------LNSLMHVYCVFHRLRD-AQ 166
K GF +V+V NSLM V V H L + A
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLM-VGFVRHGLEEEAL 351
Query: 167 ELF----------DEILYRDVVSC---------------------------NTLIDGYVK 189
LF D+ + V++C N L+D Y K
Sbjct: 352 RLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAK 411
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD+ A +F++M +D +SW +LV GYAQ++ EE++++FC+M + PD + S
Sbjct: 412 TGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASI 471
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSACA L LE GK +H + +R + LV YAKCG ++ A IF S Q K++
Sbjct: 472 LSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDV 531
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
TW A++VG A +G GR SL ++ M+ + +PD +T +G L CSHAGLVDE RK F +
Sbjct: 532 ITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQ 591
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M VYG+ +HY CM DL GR+G ++EA +++ +M + D VW LL CR+H N+E
Sbjct: 592 MNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLE 651
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+AE AA ++ +L+P + Y +L+++Y+ + +W DV KIR+ + + I K GCS +++N
Sbjct: 652 LAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEIN 711
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 141/291 (48%), Gaps = 10/291 (3%)
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
++ N L++ ++ DA++LFD++ +D S NT+I YV G L AR+LFD
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
+ +++W ++++GY + EA LF +M K L S L C+ LG ++ G+ I
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ--EKNLFTWNAMLVGLAMHG 323
H ++ N + F+ TGLVD YAKC ++ A +F+ + KN W AM+ G A +G
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
Query: 324 LGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY---GVSKEL 380
G ++ +F M ++ + T L CS AR +++ G +
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSV----LARCFGEQVHGFIVKSGFGSNV 300
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ D+ + G ++ A M++ M DV W+ L+ G HG E A
Sbjct: 301 YVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRHGLEEEA 350
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 195/465 (41%), Gaps = 90/465 (19%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFL-SPCHILTTILYAITTFKPISSASSPTTDPLSY 63
N I +T++Q+ I F +K L F +PC + L +I T S S T+ L
Sbjct: 17 NKITDERTVQQV--IMHKFSSKVLSFPHNPCKFMA-FLRSIHTTTAASYESIYQTNQLLN 73
Query: 64 ALS----------IFNNIPYPSTFSYNTIIRAHT-------------------------- 87
LS +F+ +P +S+NT+I ++
Sbjct: 74 QLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSI 133
Query: 88 -----LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGF 142
F + A LF MR ++ +LR CS L + IH V+K GF
Sbjct: 134 ISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGF 193
Query: 143 ICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDR 202
+VFV+ L+ +Y + +A+ LF + FDR
Sbjct: 194 EGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE--------------------------FDR 227
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQG 262
++ V W +V GYAQ+ +A++ F M ++ + + L+AC+ + G
Sbjct: 228 ---KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFG 284
Query: 263 KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
+ +H +I + + ++ + LVD YAKCG + A + E+ ++ ++ +WN+++VG H
Sbjct: 285 EQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRH 344
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG--VSKEL 380
GL +L F M +K D T +++ C G ++ +SV+G +
Sbjct: 345 GLEEEALRLFKNMHGRNMKIDDYT-FPSVLNCCVVGSINP--------KSVHGLIIKTGF 395
Query: 381 KHY----GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
++Y + D+ + G ++ A + +KM + DV W+ L+ G
Sbjct: 396 ENYKLVSNALVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLVTG 439
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 113/267 (42%), Gaps = 33/267 (12%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
T + A ++F + S+ +++ + +S ++ +F MR + PD + +
Sbjct: 412 TGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASI 471
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L AC++L + +H +K G V NSL+ +Y L DA +F + +DV
Sbjct: 472 LSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDV 531
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
++ +I GY + G ++ + +D M VS GT
Sbjct: 532 ITWTAIIVGYAQNGKGRNSLKFYDAM-----VSSGT------------------------ 562
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINT 296
+PD I + L AC+ G +++G+ + + ++ I+ ++D + + G ++
Sbjct: 563 --RPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDE 620
Query: 297 AIEIFESSQEK-NLFTWNAMLVGLAMH 322
A ++ + K + W ++L +H
Sbjct: 621 AKQLLDQMDVKPDATVWKSLLSACRVH 647
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 232/430 (53%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P+PST + +I A+ AV + + PD ++ +L A
Sbjct: 601 LHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTA 660
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ + +T+ + G VFV +
Sbjct: 661 CARIADLATGETVWRAAEQEGVAQSVFVATAA---------------------------- 692
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+D YVK G++A AR++FD+M +DAV+WG +V GYA + EA+ LF M +K
Sbjct: 693 ---VDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 749
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD A+ ALSAC RLG L+ G+ R ++ ++ + L T L+D YAKCG A +
Sbjct: 750 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVV 809
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K++ WNAM++GL M G +++ +M ++ +K + T +G L C+H GL+
Sbjct: 810 FQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 869
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ R+ F M +Y +S ++HYGCM DLL RAGL++EA +++ MPM + + LLG
Sbjct: 870 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLG 929
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GC+IH N E+AE + ++ L+P + G Y +L+++Y+N RWED K+R + A ++K
Sbjct: 930 GCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKV 989
Query: 481 AGCSLIQLNG 490
CS ++ G
Sbjct: 990 PACSWVEFEG 999
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 149/334 (44%), Gaps = 50/334 (14%)
Query: 109 PDFYSFPFLLRACSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
P + P L++ S+L H L + +H++ LKL + VL SL+ +Y
Sbjct: 547 PSHLTIPIALKSASRL-PHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLY---------- 595
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
K G L A+++FD MP V W L+ Y + E
Sbjct: 596 ---------------------AKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLRE 634
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
A+ + N ++PD+ V L+ACAR+ +L G+ + R E + F++T VD
Sbjct: 635 AVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVD 694
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
Y KCG + A E+F+ + K+ W AM+ G A +G R +L F M +KPD
Sbjct: 695 LYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 754
Query: 347 ILGALVGCSHAGLVDEARKL-----FDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ GAL C+ G +D R+ +DE V G + + D+ + G EA
Sbjct: 755 VAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA--------LIDMYAKCGSTVEA 806
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+ ++M D+ VW+ ++ G + G+ +IA A
Sbjct: 807 WVVFQQM-RKKDIIVWNAMILGLGMTGHEKIAFA 839
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 236/431 (54%), Gaps = 7/431 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
L A +F +P ++ S+ +I A+ L ++ R+ S+P D SF L
Sbjct: 505 LKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSD-SSFTSALS 563
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC+ + + + IHS +K G + +V+N L+ +Y + D +F I +D VS
Sbjct: 564 ACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS 623
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N+LI G + L AR +F++MP RD VSW +++ Y Q+ E A+ LF +M+ I
Sbjct: 624 WNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGI 683
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTA 297
KP+ + + S LSAC LG ++ G+ H I ++ D+FL G L+ Y KCGY
Sbjct: 684 KPNQLTVTSLLSACGNLGAIKLGEQFHALI--FKLGFDTFLFVGNSLITMYFKCGY-EDG 740
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+FE E +L TWNA+LVG A +GLG+ ++ F +M I PD ++ LG L CSHA
Sbjct: 741 FCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHA 800
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLVDE F+ M YG+ + HY CM DLLGRAG + EA +I+ MP+ D +W
Sbjct: 801 GLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEA 860
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG CRIH NVE+ + AE + ++ Y +L++++A+ W+ V +IR+ + +
Sbjct: 861 LLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGL 920
Query: 478 KKNAGCSLIQL 488
K G S IQ+
Sbjct: 921 TKEPGISWIQV 931
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 149/307 (48%), Gaps = 34/307 (11%)
Query: 151 SLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
++M Y R++ A+ +FDEIL +VV+ N +I GY + G L A+ LF +MP +++ S
Sbjct: 463 AMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSAS 522
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W ++AG+ Q+++ EA++L + P + + SALSACA +G++E G+ IH
Sbjct: 523 WAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAI 582
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH-------- 322
+ +S++ GL+ YAKCG + +F + + K+ +WN+++ GL+ +
Sbjct: 583 KTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARV 642
Query: 323 -----------------------GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
G G ++L F M+ IKP+ +T+ L C + G
Sbjct: 643 VFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGA 702
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+ + F + G L + + + G E+ + ++MP D+ W+ +L
Sbjct: 703 IKLGEQ-FHALIFKLGFDTFLFVGNSLITMYFKCGY-EDGFCVFEEMP-EHDLITWNAVL 759
Query: 420 GGCRIHG 426
GC +G
Sbjct: 760 VGCAQNG 766
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 168/358 (46%), Gaps = 18/358 (5%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN + S+N++I ++ A +LF + + ++ LL ++
Sbjct: 190 ARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF----VGKNIRTWTILLTGYAK 245
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A+ + + + +V N+++ Y L++A++LFDE+ ++V S N++
Sbjct: 246 EGRIEEAREVFESMTER----NVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSV 301
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY ++ AR+LFD+MP R++VSW +++GY EA +F M +PD
Sbjct: 302 VTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQ 361
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
V LSA L +LE ++ D + + +++ Y + G ++ A+ FE+
Sbjct: 362 SIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFET 421
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
E+N ++W M+ A G ++ + R+ E + T + + G + +A
Sbjct: 422 MPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKA 477
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R +FDE+ ++ + + + + G+++EA ++ +KMP+ W+ ++ G
Sbjct: 478 RLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSA-SWAAMIAG 529
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 145/304 (47%), Gaps = 20/304 (6%)
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
+F N+ + R+ +A+ +F+E++ RDVVS N++I+GY + G + AR LFD
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVG 230
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
++ +W L+ GYA+ + EEA ++F +M + ++ ++ + +S + G+L+ + +
Sbjct: 231 KNIRTWTILLTGYAKEGRIEEAREVFESMTERNV----VSWNAMISGYVQNGDLKNARKL 286
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
+ E+ + V S+ S +V Y C ++ A E+F+ E+N +W M+ G
Sbjct: 287 --FDEMPEKNVASWNS--VVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDY 342
Query: 326 RLSLVYFSRMIEARIKPDG---VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
+ F +M +PD V +L A+ G L+ R + + G ++
Sbjct: 343 WEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKT----GYEGDVVV 398
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG---C-RIHGNVEIAEAAAEHV 438
+ + R G ++ A+ + MP + + W+ ++ C R+ +++ E E
Sbjct: 399 GSAILNAYTRNGSLDLAMHFFETMPERNE-YSWTTMIAAFAQCGRLDDAIQLYERVPEQT 457
Query: 439 MKLK 442
+ K
Sbjct: 458 VATK 461
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+ G + A +F ++++ +WN+M+ G + +G + + F + I+ TIL
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRT--WTIL 239
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L G + G ++EAR++F+ M + + + M + G ++ A ++ +MP
Sbjct: 240 --LTGYAKEGRIEEAREVFESM-----TERNVVSWNAMISGYVQNGDLKNARKLFDEMP- 291
Query: 409 GGDVFVWSGLLGG-CRIHGNVEIAEAAAEHVMKLKPEDGGV-YKVLADVYAN-ADRWE 463
+V W+ ++ G C + E A + PE V + V+ Y + +D WE
Sbjct: 292 EKNVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNSVSWMVMISGYVHISDYWE 344
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 250/485 (51%), Gaps = 41/485 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + +C ++ ++ QI A+ + L S +LT ++ T +PTT + +A
Sbjct: 34 SLLSKCTSLNELKQIQAYTIKTNLQ--SDISVLTKLINFCTL--------NPTTSYMDHA 83
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+F+ I +N + R + +SP A LF ++ + PD Y+F LL+AC+
Sbjct: 84 HHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASS 143
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ +H +KLG ++++ C TLI
Sbjct: 144 KALREGMGLHCFAVKLGLNHNIYI-------------------------------CPTLI 172
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
+ Y + D+ AR +FD M VS+ ++ GYA+S Q EA+ LF + +I+P ++
Sbjct: 173 NMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDV 232
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
++S + +CA LG L+ GK IH Y++ ++T L+D +AKCG + AI IFE
Sbjct: 233 TMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM 292
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+ ++ W+AM+V A HG G ++ F M ++PD +T LG L CSHAGLV++ R
Sbjct: 293 RVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGR 352
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F M YG++ +KHYGCM DLLGRAG ++EA + K+ + +W LL C
Sbjct: 353 GYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACST 412
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
HGNVE+A+ E + +L GG Y +L+++YA RWEDV +R+ + + K GCS
Sbjct: 413 HGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCS 472
Query: 485 LIQLN 489
+++N
Sbjct: 473 SVEVN 477
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 237/430 (55%), Gaps = 1/430 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + +P + S+ T+I H A+ L+SQM P+ F +L A
Sbjct: 329 LDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSA 388
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L IH+ LK+G ++FV +SL+ +YC + AQ +F+ + ++ V
Sbjct: 389 CATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCW 448
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI GY G + A LF++MP R++VSW T+++GYA++ + +A+ F M+
Sbjct: 449 NSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHI 508
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P I L S L ACA L LE G+ +H I I + F+ T L D YAK G ++++ +
Sbjct: 509 PGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRV 568
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F EKN TW AM+ GLA +G S+ F MIE I P+ T L L CSH GLV
Sbjct: 569 FYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLV 628
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++A F+ M++ +G+ + KHY CM D+L RAG + EA E++ K+ D WS LL
Sbjct: 629 EQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLS 687
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C + N EI E AA+ + +L+ ++ Y +L+++YA+ +W+D + R + +KK+
Sbjct: 688 ACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLKKD 747
Query: 481 AGCSLIQLNG 490
AGCS +QL G
Sbjct: 748 AGCSWLQLRG 757
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 185/406 (45%), Gaps = 50/406 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ ++ P S + +I +A +F +M T S+ P+ + +++AC
Sbjct: 199 AVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVG 258
Query: 124 LCSHSLAQTIHSQVLKLGFICDVF-----VLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
LA V+ L C++F V NSL+ +Y A+ +FD++ RDVV
Sbjct: 259 AGEFDLAM----GVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVV 314
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S L+D Y GDL AR++ D MP R+ VSWGTL+A + Q EA++L+ M+
Sbjct: 315 SWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADG 374
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS----FLSTGLVDFYAKCGYI 294
+P+ S LSACA L +L G IH N +++ S F+S+ L+D Y KC
Sbjct: 375 CRPNISCFSSVLSACATLQDLRGGTRIH----ANALKMGSSTNLFVSSSLIDMYCKCKQC 430
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHG--------LGRL------------------- 327
A +F S EKN WN+++ G + +G ++
Sbjct: 431 TYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENR 490
Query: 328 ----SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
+L YF M+ + P +T+ L+ C++ ++ R + E+ + G+ +
Sbjct: 491 RFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKL-GIEDNIFMG 549
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ D+ ++G ++ + + +MP ++ W+ ++ G +G E
Sbjct: 550 TALCDMYAKSGDLDSSRRVFYQMPEKNNI-TWTAMVQGLAENGFAE 594
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 156/394 (39%), Gaps = 73/394 (18%)
Query: 91 SPLNAVVLFSQMRTVSIPP------DFYSFP----FLLRACSQLCSHS------------ 128
SPL + ++R + PP DF ++ LLR C + + S
Sbjct: 36 SPLTLPIKAFKLRLANGPPLAPTAKDFKTYSETCASLLRLCRAMSATSTTMPSYAPSSGC 95
Query: 129 --LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRD---------------------- 164
L ++H+ L+ G D V ++L+ Y F R D
Sbjct: 96 LPLVLSLHAHALRSGLATDRSVASNLLTAYAAFARAGDRDQAFRDCVAADAASSFTYDFM 155
Query: 165 ------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
A+ LF + + VVS T++D +K G + A +L++R P +
Sbjct: 156 VSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFT 215
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN-IHRYIEL 271
+++G+ +++ ++A +F M+ ++P+ + L+ + AC GE + + ++
Sbjct: 216 AMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKC 275
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
N + L+ Y + G A +F+ + +++ +W A+L A LG L
Sbjct: 276 NLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYA--DLGDLDGA- 332
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM------ESVYGVSKELKHYGC 385
R+++A + V+ + G EA KL+ +M ++ S L
Sbjct: 333 -RRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACAT 391
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+ DL G + AL KM ++FV S L+
Sbjct: 392 LQDLRGGTRIHANAL----KMGSSTNLFVSSSLI 421
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 273/549 (49%), Gaps = 76/549 (13%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
R K+I + QIHA L L S ++LT +TT +++++ +++A F
Sbjct: 26 RTKSIPTLLQIHAFILRHSLH--SNLNLLTAF---VTTCASLAASAKRPLAIINHARRFF 80
Query: 69 NNIPYPSTFSYNTIIRAH---TLFSSPLNAVVLFSQMRTVSIP--PDFYSFPFLLRACSQ 123
N TF N++I AH FS P LF +R + P PD Y+F L++ C+
Sbjct: 81 NATHTRDTFLCNSMIAAHFAARQFSQPF---TLFRDLRRQAPPFTPDGYTFTALVKGCAT 137
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRL--------------------- 162
+ +H VLK G D++V +L+ +Y F L
Sbjct: 138 RVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAV 197
Query: 163 ----------RDAQELFDEILYRDVVSCNTLIDGYVKAG--------------------- 191
+A+ LFDE+ RD+V+ N +IDGYVK G
Sbjct: 198 IVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWT 257
Query: 192 ----------DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
D+ +A+ +FD MP ++ +W ++ GY Q+ + +A++LF M ++P
Sbjct: 258 SMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEP 317
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + +V L A A LG L+ G+ IHR+ ++ + + T L+D YAKCG I A F
Sbjct: 318 NEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAF 377
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
E E+ +WNA++ G A++G + +L F+RMIE P+ VT++G L C+H GLV+
Sbjct: 378 EGMTERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVE 437
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E R+ F+ ME +G++ +++HYGCM DLLGRAG ++EA +I+ MP + + S L
Sbjct: 438 EGRRWFNAMER-FGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFA 496
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C +V AE + V+K+ + G Y +L ++YA RW DV +++ + K
Sbjct: 497 CGYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEV 556
Query: 482 GCSLIQLNG 490
CS+I++ G
Sbjct: 557 ACSVIEIGG 565
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 160/406 (39%), Gaps = 80/406 (19%)
Query: 86 HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR---------------ACSQLCSHS-- 128
TL+S+ + Q RT SIP F+LR C+ L + +
Sbjct: 9 RTLWSNAERTCLHILQCRTKSIPTLLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKR 68
Query: 129 -LAQTIHS-QVLKLGFICDVFVLNSLM----------HVYCVFHRLRDAQELFDEILYR- 175
LA H+ + D F+ NS++ + +F LR F Y
Sbjct: 69 PLAIINHARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTF 128
Query: 176 ------------------------------DVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
D+ L+D YVK G L AR++FD M
Sbjct: 129 TALVKGCATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSV 188
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
R VSW ++ GYA+ EA +LF M D DI +A + + ++G + + +
Sbjct: 189 RSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDI----VAFNAMIDGYVKMGCVGLAREL 244
Query: 266 HRYIELNQIRVDSFLS-TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
N++R + +S T +V Y G + A +F+ EKN+FTWNAM+ G +
Sbjct: 245 -----FNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRR 299
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
+L F M A ++P+ VT++ L + G +D R + + + K+L
Sbjct: 300 SHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHR-----FALRKKLDRSA 354
Query: 385 ----CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ D+ + G I +A + M + W+ L+ G ++G
Sbjct: 355 RIGTALIDMYAKCGEITKAKLAFEGMT-ERETASWNALINGFAVNG 399
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 234/422 (55%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ +P S T+I A+ LFS+M ++I P+ ++F ++ + + L +
Sbjct: 55 LFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLKN 114
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L + +H++ +K+G VFV ++++ Y +A+ F++I +VVS TLI G
Sbjct: 115 IYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHG 174
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y+K G + A QLF MP R+ VSW +V G++Q EEA+ LF M+ P+
Sbjct: 175 YLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTF 234
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
A+++ A + L GK+ H + D F+ LV FYAKCG + ++ +F +
Sbjct: 235 PCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPD 294
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+N +WNA++ G A +G G ++++F RM A ++P+ VT+LG L C+HAGLV++
Sbjct: 295 RNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMY 354
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F++M + +HY CM DLL R G ++EA + + +P W LLGGC IH
Sbjct: 355 FNQMRQEEPGILKPEHYACMVDLLSRFGRLKEAAKFLHDLPFDPGTGFWKALLGGCHIHS 414
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N E+++ AA+ ++ L PED Y +L++ Y+ A RW+ V IRR + +K+ GCS I
Sbjct: 415 NAELSDLAAQKILALDPEDVSSYVMLSNAYSAAGRWQQVSTIRREMKEKGLKRIPGCSWI 474
Query: 487 QL 488
++
Sbjct: 475 EV 476
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
+LFD MP D +S TL+ +A+ + EEA+ LF M+ L+IKP+ + + + L
Sbjct: 54 ELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLK 113
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
+ GK +H + F+ + ++DFYAK A FE Q+ N+ ++ ++
Sbjct: 114 NIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIH 173
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
G G +L F M E + V+ + G S G +EA LF EM
Sbjct: 174 GYLKKGKIDDALQLFQEMPERNV----VSWNAMVGGFSQMGHNEEAVSLFIEM 222
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 43/272 (15%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL +F +P + S+N ++ + AV LF +M P+ +FP + + +
Sbjct: 184 ALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAAN 243
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S + ++ H+ +K DVFV NSL+ Y + D+ +F+E+ R+ VS N +
Sbjct: 244 MASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAV 303
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G +AQ+ + E+A+ F M ++P++
Sbjct: 304 ICG-------------------------------FAQNGRGEDAVIFFERMRAAGLRPNS 332
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDS--FLSTG----LVDFYAKCGYINTA 297
+ L+ L AC G +E+G Y+ NQ+R + L +VD ++ G + A
Sbjct: 333 VTLLGLLCACNHAGLVEKG-----YMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKEA 387
Query: 298 IEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLS 328
+ + W A+L G +H LS
Sbjct: 388 AKFLHDLPFDPGTGFWKALLGGCHIHSNAELS 419
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 245/473 (51%), Gaps = 53/473 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPL-------NAVVLFSQMRTVSIPPDFYS 113
LS A +F+ IP NT IR + + A+ FS+M+ + P+ +
Sbjct: 854 LSNARKLFDKIP-------NTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFV 906
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
P +L+AC L + +H+ +LK F D +++++L+++Y + A +FD I+
Sbjct: 907 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIV 966
Query: 174 YRD-----------------------------------VVSCNTLIDGYVKAGDLAHARQ 198
+D VVS NTLI G+ + GD + +
Sbjct: 967 DKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSE 1026
Query: 199 LFDRMPFR----DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
+F M D VSW ++++G+ Q+ E F M+D P ++ + S L AC
Sbjct: 1027 VFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACT 1086
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
+ L GK IH Y + + D ++ + LVD YAKCGYI+ A +F E+N TWN+
Sbjct: 1087 NVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNS 1146
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
++ G A HG ++ F++M E+ K D +T L CSHAG+V+ LF +M+ Y
Sbjct: 1147 LIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKY 1206
Query: 375 GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAA 434
+ L+HY CM DLLGRAG + EA ++IK MP+ D FVW LLG CR HGN+E+AE A
Sbjct: 1207 RIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVA 1266
Query: 435 AEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
AEH+ +L+PE G +L+++YA+A RW + K+++ + K K GCS I+
Sbjct: 1267 AEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 228/493 (46%), Gaps = 50/493 (10%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
T + + C TI I Q+HAH + + +LS + +L + + A
Sbjct: 216 TYSTMLAVCGTISAIQEGKQLHAHVVK--MQYLSETAVGNALLTLYSKCGMMEEAEI--- 270
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+F ++ + S+ I A+ FS MR I P+ ++F +L
Sbjct: 271 --------VFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVL 322
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+C + + H+QV+K G VFV ++
Sbjct: 323 ASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAI-------------------------- 356
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDA--VSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
ID Y G++ A + F +M R A VSW L+AGY +++ E+A++ FC M+
Sbjct: 357 -----IDMYSGLGEMDEAEKQFKQMG-RAASNVSWNALIAGYVLNEKIEKAMEAFCRMVK 410
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
D+ + + AC+ L IH + + + + +++ L++ Y +CG +
Sbjct: 411 EDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLEN 470
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A+++F + ++ +WN+++ + +G ++ +MIE KP T L L CSH
Sbjct: 471 AVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSH 530
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLV E ++ F M Y + E H CM D+LGRAG +E AL+ IKK+ M +W
Sbjct: 531 SGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWR 590
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL CR + N+++AE AE ++ L+P D VY L+++YA RW D RR ++ +
Sbjct: 591 PLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKE 650
Query: 477 IKKNAGCSLIQLN 489
I K GCS I++N
Sbjct: 651 ISKEPGCSWIEVN 663
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 1/262 (0%)
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
L D C +LID Y K G++ A +++D+M DA + L++ YA++ +A Q+F
Sbjct: 144 LGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFM 203
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
+ ++ +P++ + L+ C + +++GK +H ++ Q ++ + L+ Y+KCG
Sbjct: 204 QIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCG 263
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
+ A +FES +++N+ +W A + G HG + +L FS M E+ I+P+ T L
Sbjct: 264 MMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLA 323
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C + R +F G++ + + D+ G ++EA + K+M
Sbjct: 324 SCGCVKDFIDGR-MFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASN 382
Query: 413 FVWSGLLGGCRIHGNVEIAEAA 434
W+ L+ G ++ +E A A
Sbjct: 383 VSWNALIAGYVLNEKIEKAMEA 404
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 5/279 (1%)
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+ Y + G L++AR+LFD++P + W L A+ EEA+ F M ++P+
Sbjct: 844 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 903
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
L S L AC L + G+N+H I N D+++ + L+ Y+KCG++ A +F+
Sbjct: 904 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 963
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+K+L NAM+ G A HG +L +M +A +KP+ V+ + G S G
Sbjct: 964 WIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 1023
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLL 419
++F M + GV ++ + + + E + K+M G S LL
Sbjct: 1024 VSEVFRLM-TANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLL 1082
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPE-DGGVYKVLADVYA 457
C N+ + + M + E D V L D+YA
Sbjct: 1083 PACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYA 1121
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/370 (17%), Positives = 159/370 (42%), Gaps = 44/370 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ +++ + + N +I A+ + A +F Q+ + P+ Y++ +L C
Sbjct: 167 AVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGT 226
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + +H+ V+K+ ++ + V N+L+ +Y + +A+ +F+ + R+++S
Sbjct: 227 ISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTAS 286
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+G+ + GD ++A++ F M + I+P+
Sbjct: 287 INGFYQHGDF-------------------------------KKALKQFSMMRESGIEPNE 315
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
L++C + + G+ H + + F+ T ++D Y+ G ++ A + F+
Sbjct: 316 FTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQ 375
Query: 304 -SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH----AG 358
+ + +WNA++ G ++ ++ F RM++ + + T CS A
Sbjct: 376 MGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLAT 435
Query: 359 LVD-EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
V +R + +ES V+ L + + G +E A+++ ++ DV W+
Sbjct: 436 TVQIHSRLIKSNVESNLHVASSL------IEAYTQCGSLENAVQVFTQIS-DADVVSWNS 488
Query: 418 LLGGCRIHGN 427
++ +G+
Sbjct: 489 IIKAYSQNGD 498
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 14/266 (5%)
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ---L 230
Y+ +S ++ G+V DL +A LF++ P R VS T +D EE ++
Sbjct: 40 YKGCMSKGNVVGGWV---DLNNACILFEKTPKRIGVSI-TESHRSGCTDDPEEGVKEAGF 95
Query: 231 FCNMMDLDIK-----PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
F ++ P + SALS C R G +E G+ H ++ + D F+ T L+
Sbjct: 96 FTRNETPHVEFGGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLI 155
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
D YAKCG +++A+ +++ + T N ++ A +G + F ++ +P+
Sbjct: 156 DMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHY 215
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T L C + E ++L + + +S E + L + G++EEA E++ +
Sbjct: 216 TYSTMLAVCGTISAIQEGKQLHAHVVKMQYLS-ETAVGNALLTLYSKCGMMEEA-EIVFE 273
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIA 431
++ W+ + G HG+ + A
Sbjct: 274 SLRQRNIISWTASINGFYQHGDFKKA 299
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
A+ AR L +G+ +H ++ + + ++ + L+ FY +CG ++ A ++F+ N
Sbjct: 809 AIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTN 868
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH------------ 356
+ W + A G +L FS M + ++P+ + L C H
Sbjct: 869 IRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHT 928
Query: 357 -----------------------AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
G V++A ++FD + V K+L M +
Sbjct: 929 VILKNSFESDAYIISALIYMYSKCGHVEKACRVFD-----WIVDKDLVVMNAMVSGYAQH 983
Query: 394 GLIEEALEMIKKMPMGG---DVFVWSGLLGG 421
G + EAL++++KM G +V W+ L+ G
Sbjct: 984 GFVHEALBLVQKMQQAGVKPNVVSWNTLIAG 1014
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 261/490 (53%), Gaps = 20/490 (4%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ RC T+ + Q+HAH + G TTF + AS + L YA
Sbjct: 235 LHRCATLAHLKQLHAHAVVTG-----------RAAAQTTTFHLLRFASLRLS-CLPYARR 282
Query: 67 IFNNIPYPSTFSYNTIIRAHTLF-----SSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRA 120
+F+ P P+ F Y+ ++ A+ +++ LF +M P P+ + +P +LRA
Sbjct: 283 LFDATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRA 342
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ L ++IH K GF F+ SL+ Y + + DA++LFD + R+VVS
Sbjct: 343 ACAI-GVQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRNVVSW 401
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+ GY +AG + A LF+RMP RD +W ++AG Q+ EA+ +F M+D +
Sbjct: 402 TALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFR 461
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + LSAC LG L+ GK IH Y + + S + GL+D Y KCG + A I
Sbjct: 462 PNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWI 521
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F++ ++ L TWN+++ LA+HG ++ F+ M ++PD VT +G L C+H G V
Sbjct: 522 FDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFV 581
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE + F+ M +G+ E++HYGC+ DLL RAG ++A+ I M + D +W LL
Sbjct: 582 DEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLN 641
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI-KK 479
CRIH ++E+AE A +++ L P + +LA++Y+ WE+V K+R+ + KK
Sbjct: 642 ACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKK 701
Query: 480 NAGCSLIQLN 489
GCS I+++
Sbjct: 702 LPGCSWIEVD 711
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 231/430 (53%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P+PST S+ +I A+ AV + + PD ++ +L A
Sbjct: 122 LHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTA 181
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ + +T+ + G VFV +
Sbjct: 182 CARVADLATGETVWRAAEQEGIAQSVFVATAA---------------------------- 213
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+D YVK G++A AR++FD+M +DAV+WG +V GYA + EA+ LF M ++
Sbjct: 214 ---VDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 270
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD A+ ALSAC RLG L+ G+ R ++ ++ + L T L+D YAKCG A +
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVV 330
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K++ WNAM++GL M G + + +M ++ +K + T +G L C+H GL+
Sbjct: 331 FQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLI 390
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ R+ F M +Y +S ++HYGC+ DLL RAGL++EA ++I MPM + + LLG
Sbjct: 391 QDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLG 450
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GC+IH N E+AE +++L+P + G Y +L+++Y+N RWED K+R + ++K
Sbjct: 451 GCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKV 510
Query: 481 AGCSLIQLNG 490
CS ++ G
Sbjct: 511 PACSWVEFEG 520
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 150/332 (45%), Gaps = 50/332 (15%)
Query: 109 PDFYSFPFLLRACSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
P +FP L++ S+L H L + +H++ LKL + VL SL+ +Y
Sbjct: 68 PSHLTFPIALKSASRL-PHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLY---------- 116
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
+ G L A+++FD MP VSW L+ Y + E
Sbjct: 117 ---------------------ARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLRE 155
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
A+ + N ++PD+ V L+ACAR+ +L G+ + R E I F++T VD
Sbjct: 156 AVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVD 215
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
Y KCG + A E+F+ ++K+ W AM+ G A +G R +L F M ++PD
Sbjct: 216 LYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYA 275
Query: 347 ILGALVGCSHAGLVDEARKL-----FDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ GAL C+ G +D R+ +DE V G + + D+ + G EA
Sbjct: 276 VAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA--------LIDMYAKCGSTAEA 327
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ ++M D+ VW+ ++ G + G+ + A
Sbjct: 328 WVVFQQM-RKKDIIVWNAMILGLGMTGHEKTA 358
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 231/430 (53%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P+PST S+ +I A+ AV + + PD ++ +L A
Sbjct: 169 LHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTA 228
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ + +T+ + G VFV +
Sbjct: 229 CARVADLATGETVWRAAEQEGIAQSVFVATAA---------------------------- 260
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+D YVK G++A AR++FD+M +DAV+WG +V GYA + EA+ LF M ++
Sbjct: 261 ---VDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 317
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD A+ ALSAC RLG L+ G+ R ++ ++ + L T L+D YAKCG A +
Sbjct: 318 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVV 377
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K++ WNAM++GL M G + + +M ++ +K + T +G L C+H GL+
Sbjct: 378 FQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLI 437
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ R+ F M +Y +S ++HYGC+ DLL RAGL++EA ++I MPM + + LLG
Sbjct: 438 QDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLG 497
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GC+IH N E+AE +++L+P + G Y +L+++Y+N RWED K+R + ++K
Sbjct: 498 GCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKV 557
Query: 481 AGCSLIQLNG 490
CS ++ G
Sbjct: 558 PACSWVEFEG 567
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 150/332 (45%), Gaps = 50/332 (15%)
Query: 109 PDFYSFPFLLRACSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ 166
P +FP L++ S+L H L + +H++ LKL + VL SL+ +Y
Sbjct: 115 PSHLTFPIALKSASRL-PHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLY---------- 163
Query: 167 ELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
+ G L A+++FD MP VSW L+ Y + E
Sbjct: 164 ---------------------ARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLRE 202
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
A+ + N ++PD+ V L+ACAR+ +L G+ + R E I F++T VD
Sbjct: 203 AVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVD 262
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
Y KCG + A E+F+ ++K+ W AM+ G A +G R +L F M ++PD
Sbjct: 263 LYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYA 322
Query: 347 ILGALVGCSHAGLVDEARKL-----FDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ GAL C+ G +D R+ +DE V G + + D+ + G EA
Sbjct: 323 VAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA--------LIDMYAKCGSTAEA 374
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ ++M D+ VW+ ++ G + G+ + A
Sbjct: 375 WVVFQQM-RKKDIIVWNAMILGLGMTGHEKTA 405
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 226/401 (56%), Gaps = 13/401 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ CK K + QIHA + GL S +LT L + + T ++YA+
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGL---SNDQLLTRKLIHLYS----------THGRIAYAI 79
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F I P TF++N IIRA+T+ A++L+ M I D ++FPF+++AC+
Sbjct: 80 LLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFL 139
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S L + +H ++K GF DVFV N+L+ Y R A ++F+++ R+VVS T+I
Sbjct: 140 SIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVIS 199
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
G + GDL AR++FD +P ++ VSW ++ GY ++ Q EEA++LF M +I P+
Sbjct: 200 GLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYT 259
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+VS + AC +G L G+ IH Y N I + +L T L+D Y+KCG I AIE+FE+
Sbjct: 260 MVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+L TWN+M+ L +HGLG+ +L FS M +KPD +T +G L C H V E
Sbjct: 320 RKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCA 379
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
F M YG++ +HY CM +L R+ ++EA + K++
Sbjct: 380 YFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 233/439 (53%), Gaps = 40/439 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV--------SIPPDFY 112
L A ++F+ IP + S+ ++I + NA++LF ++P D
Sbjct: 1193 LKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 1252
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
+L ACS++ + + +H V+K GF + V
Sbjct: 1253 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV------------------------ 1288
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
NTL+D Y K G ++++FD M +D +SW +++A YAQS EA+++F
Sbjct: 1289 -------GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFH 1341
Query: 233 NMM-DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M+ + ++ + + L + L ACA G L GK IH + + + + T ++D Y KC
Sbjct: 1342 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC 1401
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G + A + F+ +EKN+ +W AM+ G MHG + +L F +M+ A +KP+ +T + L
Sbjct: 1402 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVL 1461
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
CSHAGLV+E F+ M+ Y + ++HYGCM DL GRAG + EA +IK+M M D
Sbjct: 1462 AACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPD 1521
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
VW LLG CRIH NV++ E AA+ + +L P++ G Y +L+++YA+A RW DV ++R
Sbjct: 1522 FVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRML 1581
Query: 472 LDAGKIKKNAGCSLIQLNG 490
+ ++ K G SL++L G
Sbjct: 1582 MKNRQLVKPPGFSLVELKG 1600
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 184/394 (46%), Gaps = 50/394 (12%)
Query: 51 SSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPD 110
SS P + + A + + + S+N++I + A+ FS +R + + P
Sbjct: 1082 SSRRRPVSLSSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPT 1141
Query: 111 FYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
SFP +++CS LC + H Q GF D+FV ++L+ +Y +L+DA+ LFD
Sbjct: 1142 RSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFD 1201
Query: 171 EILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
EI R+VVS ++I GYV Q++Q + A+ L
Sbjct: 1202 EIPLRNVVSWTSMITGYV-------------------------------QNEQADNALLL 1230
Query: 231 FCNMMDLD--------IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
F + ++ + + D++ +VS LSAC+R+ + +H ++ +
Sbjct: 1231 FKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGN 1290
Query: 283 GLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIK 341
L+D YAKCG + ++F+ +EK+ +WN+M+ A GL +L F M+ ++
Sbjct: 1291 TLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVR 1350
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIE 397
+ VT+ L+ C+HAG + + + D++ + +L++ C+ D+ + G +E
Sbjct: 1351 YNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYNVCVGTSIIDMYCKCGRVE 1405
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
A + +M +V W+ ++ G +HG + A
Sbjct: 1406 MAKKTFDRMKE-KNVKSWTAMVAGYGMHGRAKEA 1438
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 41/289 (14%)
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
L D + LI Y G +A+A LF ++ +W ++ + E+A+ L+
Sbjct: 55 LSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYK 114
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
NM+ I D + AC ++ GK +H + D F+ L+DFY KCG
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCG 174
Query: 293 YINTAIEIFESSQ-------------------------------EKNLFTWNAMLVGLAM 321
+ A+++FE + KN+ +W AM+ G
Sbjct: 175 HTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIR 234
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK--E 379
+ +L F RM I P+ T++ + C+ G++ R + D Y + E
Sbjct: 235 NQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-----YAIKNCIE 289
Query: 380 LKHY--GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ Y + D+ + G I++A+E+ + MP + W+ ++ +HG
Sbjct: 290 IGVYLGTALIDMYSKCGSIKDAIEVFETMPR-KSLPTWNSMITSLGVHG 337
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 10/232 (4%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L C L Q IH I + + D L+ L+ Y+ G I AI +F Q
Sbjct: 34 LQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
FTWN ++ ++GL +L+ + M+ I D T + C++ +D + +
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ YG S ++ + D + G AL++ +KM + +V W+ ++ G G+++
Sbjct: 151 LIK-YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRV-RNVVSWTTVISGLISCGDLQ 208
Query: 430 IAEAAAEHVMKLKPEDGGV-YKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
A + + P V + + + Y + E+ +++ + + A I N
Sbjct: 209 EARRIFDEI----PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPN 256
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 224/415 (53%), Gaps = 31/415 (7%)
Query: 76 TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS 135
T YN ++ + S AV+LF QM +P + + L+ AC + L ++H
Sbjct: 117 TVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHC 176
Query: 136 QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
LK GF DV V+N I Y+K G + +
Sbjct: 177 STLKYGFDSDVSVVN-------------------------------CFITMYMKCGSVNY 205
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
A++LFD MP + +SW +V+GYAQ+ ++L+ NM + PD + LV LS+CA
Sbjct: 206 AQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCAN 265
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
LG G + I+ + + FL+ L++ YA+CG + A +F+ E+ L +W A+
Sbjct: 266 LGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAI 325
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
+ G MHG G +++ F MI + I+PDG + L CSHAGL D+ + F M+ Y
Sbjct: 326 IGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQ 385
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
+ +HY CM DLLGRAG ++EA +I+ MP+ D VW LLG C+IH NVE+AE A
Sbjct: 386 LEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAF 445
Query: 436 EHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E V++L+PE+ G Y +L+++Y+NA+ + V++IR + K+KK+ GCS ++L G
Sbjct: 446 ERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKG 500
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 163/356 (45%), Gaps = 37/356 (10%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+NT +R L A+ L+ QM P+ ++FPF L++C+ L L H Q+
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
K+G + + FV L+ +YC + +A+++F+E H+R+
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENF---------------------HSRK 115
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
L V + LV+GY + +C EA+ LF M + + +++ L+ + AC
Sbjct: 116 L--------TVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPIN 167
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
LE G ++H D + + Y KCG +N A ++F+ K L +WNAM+ G
Sbjct: 168 LELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSG 227
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME---SVYG 375
A +GL L + M + PD VT++G L C++ G A+ + E+E G
Sbjct: 228 YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLG----AQSVGHEVEFKIQASG 283
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + ++ R G + +A + MP + W+ ++GG +HG+ EIA
Sbjct: 284 FTSNPFLNNALINMYARCGNLTKAQAVFDGMPE-RTLVSWTAIIGGYGMHGHGEIA 338
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 35/287 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA +F+ +P S+N ++ + N + L+ M + PD + +L +
Sbjct: 203 VNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSS 262
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + S+ + ++ GF + F+ N+L+++Y L AQ +FD + R +VS
Sbjct: 263 CANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 322
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+I GY G H E A+QLF M+ I+
Sbjct: 323 TAIIGGY---GMHGHG----------------------------EIAVQLFKEMIRSGIE 351
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD A V LSAC+ G +QG + ++ N Q+ + +VD + G + A
Sbjct: 352 PDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQT 411
Query: 300 IFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
+ ES K + W A+L +H L+ + F R+IE ++P+ +
Sbjct: 412 LIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENI 456
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 168/500 (33%), Positives = 266/500 (53%), Gaps = 59/500 (11%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++ C + Q+ Q+HA L P T LY I SS +D ++YA
Sbjct: 32 LQTCSDMSQLKQLHAFTLRTTY----PEEPATLFLYG-----KILQLSSSFSD-VNYAFR 81
Query: 67 IFNNIPYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQ 123
+F++I S+F +NT+IRA H + S A +L+ +M PD ++FPF+L+AC+
Sbjct: 82 VFDSIENHSSFMWNTLIRACAHDV-SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 140
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S + +H Q++K GF DV+V N L+H+Y SC L
Sbjct: 141 IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYG---------------------SCGCL 179
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
DLA R++FD MP R VSW +++ + + + A+QLF M +PD
Sbjct: 180 --------DLA--RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF-REMQRSFEPDG 228
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ S LSACA LG L G H ++ + +D + L++ Y KCG + A ++
Sbjct: 229 YTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 288
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR--IKPDGVTILGALVGCSHAG 358
F+ Q+++L +WNAM++G A HG ++ +F RM++ R ++P+ VT +G L+ C+H G
Sbjct: 289 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRG 348
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
V++ R+ FD M Y + L+HYGC+ DL+ RAG I EA++M+ MPM D +W L
Sbjct: 349 FVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 408
Query: 419 LGGCRIHG-NVEIAEAAAEHVMKLKPED-------GGVYKVLADVYANADRWEDVVKIRR 470
L C G +VE++E A +++ K ++ G Y +L+ VYA+A RW DV +R+
Sbjct: 409 LDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRK 468
Query: 471 SLDAGKIKKNAGCSLIQLNG 490
+ I+K GCS I++NG
Sbjct: 469 LMSEHGIRKEPGCSSIEING 488
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 226/401 (56%), Gaps = 13/401 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ CK K + QIHA + GL S +LT L + + T ++YA+
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGL---SNDQLLTRKLIHLYS----------THGRIAYAI 79
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F I P TF++N IIRA+T+ A++L+ M I D ++FPF+++AC+
Sbjct: 80 LLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFL 139
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S L + +H ++K GF DVFV N+L+ Y R A ++F+++ R+VVS T+I
Sbjct: 140 SIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVIS 199
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
G + GDL AR++FD +P ++ VSW ++ GY ++ Q EEA++LF M +I P+
Sbjct: 200 GLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYT 259
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+VS + AC +G L G+ IH Y N I + +L T L+D Y+KCG I AIE+FE+
Sbjct: 260 MVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+L TWN+M+ L +HGLG+ +L FS M +KPD +T +G L C H V E
Sbjct: 320 RKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCA 379
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
F M YG++ +HY CM +L R+ ++EA + K++
Sbjct: 380 YFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 233/439 (53%), Gaps = 40/439 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV--------SIPPDFY 112
L A ++F+ IP + S+ ++I + NA++LF ++P D
Sbjct: 2066 LKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 2125
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
+L ACS++ + + +H V+K GF + V
Sbjct: 2126 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV------------------------ 2161
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
NTL+D Y K G ++++FD M +D +SW +++A YAQS EA+++F
Sbjct: 2162 -------GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFH 2214
Query: 233 NMM-DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M+ + ++ + + L + L ACA G L GK IH + + + + T ++D Y KC
Sbjct: 2215 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC 2274
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G + A + F+ +EKN+ +W AM+ G MHG + +L F +M+ A +KP+ +T + L
Sbjct: 2275 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVL 2334
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
CSHAGLV+E F+ M+ Y + ++HYGCM DL GRAG + EA +IK+M M D
Sbjct: 2335 AACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPD 2394
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
VW LLG CRIH NV++ E AA+ + +L P++ G Y +L+++YA+A RW DV ++R
Sbjct: 2395 FVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRML 2454
Query: 472 LDAGKIKKNAGCSLIQLNG 490
+ ++ K G SL++L G
Sbjct: 2455 MKNRQLVKPPGFSLVELKG 2473
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 182/390 (46%), Gaps = 50/390 (12%)
Query: 55 SPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF 114
S D + A + + + S+N++I + A+ FS +R + + P SF
Sbjct: 1959 SGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSF 2018
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
P +++CS LC + H Q GF D+FV ++L+ +Y +L+DA+ LFDEI
Sbjct: 2019 PCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPL 2078
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
R+VVS ++I GYV Q++Q + A+ LF +
Sbjct: 2079 RNVVSWTSMITGYV-------------------------------QNEQADNALLLFKDF 2107
Query: 235 MDLD--------IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
++ + + D++ +VS LSAC+R+ + +H ++ + L+D
Sbjct: 2108 LEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMD 2167
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGV 345
YAKCG + ++F+ +EK+ +WN+M+ A GL +L F M+ ++ + V
Sbjct: 2168 AYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAV 2227
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIEEALE 401
T+ L+ C+HAG + + + D++ + +L++ C+ D+ + G +E A +
Sbjct: 2228 TLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 2282
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+M +V W+ ++ G +HG + A
Sbjct: 2283 TFDRMK-EKNVKSWTAMVAGYGMHGRAKEA 2311
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 41/289 (14%)
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
L D + LI Y G +A+A LF ++ +W ++ + E+A+ L+
Sbjct: 55 LSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYK 114
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
NM+ I D + AC ++ GK +H + D F+ L+DFY KCG
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCG 174
Query: 293 YINTAIEIFESSQ-------------------------------EKNLFTWNAMLVGLAM 321
+ A+++FE + KN+ +W AM+ G
Sbjct: 175 HTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIR 234
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK--E 379
+ +L F RM I P+ T++ + C+ G++ R + D Y + E
Sbjct: 235 NQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-----YAIKNCIE 289
Query: 380 LKHY--GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ Y + D+ + G I++A+E+ + MP + W+ ++ +HG
Sbjct: 290 IGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVHG 337
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 5/182 (2%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L C L Q IH I + + D L+ L+ Y+ G I AI +F Q
Sbjct: 34 LQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
FTWN ++ ++GL +L+ + M+ I D T + C++ +D + +
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ YG S ++ + D + G AL++ +KM + +V W+ ++ G G+++
Sbjct: 151 LIK-YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRV-RNVVSWTTVISGLISCGDLQ 208
Query: 430 IA 431
A
Sbjct: 209 EA 210
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 241/425 (56%), Gaps = 8/425 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + + S+ ++I+ + L A VLF +M D S+ ++ A
Sbjct: 187 ARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMP----EKDLASWKVMVSAYMS 242
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + A+ + +L I DV N ++ C + A+E FD + R+V S +
Sbjct: 243 VGNLVAARNL----FELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMI 298
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
IDGY+K GD+ AR +FD+MP ++ V+W T++ GYA++ +++L+ + IKPD
Sbjct: 299 IDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDE 358
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +SAC++LG + +++ + + + T L+D YAKCG I A+++FE
Sbjct: 359 TFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEM 418
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+K+L ++ ++ A HGL ++ FS M +A IKPDGV LG L C+H GLV E
Sbjct: 419 VDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEG 478
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+LF +M YG+ KHY CM D+LGRAG +EEA +I MP+ + VW LL CR
Sbjct: 479 RRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACR 538
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H NV++AEAAA + +++P + G Y +L ++YA+A +W+D K+R + +++KN G
Sbjct: 539 VHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGS 598
Query: 484 SLIQL 488
S I+L
Sbjct: 599 SWIEL 603
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 216/474 (45%), Gaps = 47/474 (9%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
++ +K+C+++K + IHAH L G + S L +L + F +S
Sbjct: 6 ISKLLKQCRSLKTLTTIHAHLLISGSIASSDL-TLNKLLRLYSKFGAVS----------- 53
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA +F+ P P++F + +I T + NA F +M +I P ++ +L+A S
Sbjct: 54 YAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVS 113
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L ++ ++ G+ D+ V N ++ ++ + A+++FDE+ RD VS N+
Sbjct: 114 RLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNS 173
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I GY G + AR+LFDRM R+ +SW +++ GY ++ EA LF M + D+
Sbjct: 174 MITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASW 233
Query: 243 NIALVSA----------------------------LSACARLGELEQGKNIHRYIELNQI 274
+ +VSA +S C + GE++ K + + +
Sbjct: 234 KV-MVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEF--FDRMQER 290
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
V S++ ++D Y K G ++ A +F+ EKNL W+ M+ G A G SL +
Sbjct: 291 NVASWVM--IIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKT 348
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
E IKPD LG + CS G+ D A + + + L+ + D+ + G
Sbjct: 349 FKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGP-SLFPNLQVVTSLIDMYAKCG 407
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
IE A+++ +M D+ +S ++ HG E A + + K + GV
Sbjct: 408 NIERAVQVF-EMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGV 460
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 240/439 (54%), Gaps = 15/439 (3%)
Query: 64 ALSIFNNIPY----PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
AL IF + P+ ++ ++I ++ A+ LF MR + + ++
Sbjct: 127 ALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVIS 186
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C+ L + A+ IH +K GF FV ++L+ VY + A LF E+ + + S
Sbjct: 187 ICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLAS 246
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFR--------DAVSWGTLVAGYAQSDQCEEAIQLF 231
N LI + +AG A ++F ++ + VSW ++ G+A + +EA++LF
Sbjct: 247 WNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELF 306
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL-STGLVDFYAK 290
M I + + + + LS CA L L G+ IH ++ + + V++ L GLV+ YAK
Sbjct: 307 RRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHV-VRAVMVNNILVGNGLVNMYAK 365
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
CG + IFE ++ K+L +WN+M+ G MHGLG +L F +MI+ KPDGVT +
Sbjct: 366 CGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAV 425
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
L CSH+GLV E R+LFD+M Y + +++HY CM DLLGRAGL+ EA E++K MP+
Sbjct: 426 LSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAP 485
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK-PEDGGVYKVLADVYANADRWEDVVKIR 469
+ VW LL CR+H N EIAE A H+ L E G Y +L+++YA + RWED ++R
Sbjct: 486 NACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVR 545
Query: 470 RSLDAGKIKKNAGCSLIQL 488
S +KKN G S I++
Sbjct: 546 TSAKTKGLKKNPGQSWIKV 564
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 149/283 (52%), Gaps = 8/283 (2%)
Query: 97 VLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY 156
V+ +MR + D ++FP ++RAC+ + S L +TIH VL++GF + V N L+ +Y
Sbjct: 28 VMPRRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMY 87
Query: 157 CVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR----DAVSWG 212
R+RDA+ LFD + R +S NT++ Y D A ++F RM + V+W
Sbjct: 88 AKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWT 147
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+L++ YA+S EEA++LF M ++ AL +S CA LG + K IH Y
Sbjct: 148 SLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKG 207
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
SF+ + L+ Y K G +N A +F + K+L +WNA++ A GL +L F
Sbjct: 208 GFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIF 267
Query: 333 SRMIEA----RIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
S++ + R++P+ V+ + G + G EA +LF M+
Sbjct: 268 SQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQ 310
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 238/423 (56%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ + S+ ++ ++ + A++LF++M+ + PD +L AC +
Sbjct: 207 VFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVLPACGHIRH 266
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ + IHS +L I + ++L+ +Y + A++L++E+ +D+VS ++ G
Sbjct: 267 LRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSG 326
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y + + AR +FD MP +D VSW +++GY S+Q EA+ LF M + I+ D I +
Sbjct: 327 YARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITM 386
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+S +SACA LG L++ K IH +I+ + + + L+D +AKCG IN A+ +F
Sbjct: 387 LSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPL 446
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
KN+ TW +M+ AMHG G+ SL F +M + +P+ VT L L C HAGLV E R L
Sbjct: 447 KNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLL 506
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M YG+ + +HYGCM DLLGRA L++EA+ +I+ M + +V +W LL C +HG
Sbjct: 507 FSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVPIWGSLLAACWMHG 566
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
++++ AA+ +++L P G +L +Y +D + ++R + ++ K G S +
Sbjct: 567 DLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMKLHRVSKETGLSWM 626
Query: 487 QLN 489
+LN
Sbjct: 627 ELN 629
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 33/277 (11%)
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
L Y G + R++FD M RD VSWG ++ Y Q+ +EA+ LF M + + P
Sbjct: 190 ALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVP 249
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC---------- 291
D + L + L AC + L GK IH Y+ ++ + + + +S+ L+ YA C
Sbjct: 250 DQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLY 309
Query: 292 ----------------GY-----INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
GY + A IF+ EK++ +W+AM+ G +L
Sbjct: 310 NEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALS 369
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F+ M E I+ D +T+L + C++ G +D+A+ + +++ G++K L + D+
Sbjct: 370 LFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKN-SGLNKVLHICNALIDMF 428
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ G I AL + +MP+ +V W+ ++ +HG+
Sbjct: 429 AKCGGINLALNVFNEMPL-KNVITWTSMISAFAMHGD 464
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A SIF+ +P S++ +I + + P A+ LF+ M+ I D + ++ AC+
Sbjct: 336 ARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACAN 395
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L S A+ IH+ + G LN ++H+ CN L
Sbjct: 396 LGSLDKAKWIHAFIKNSG-------LNKVLHI------------------------CNAL 424
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID + K G + A +F+ MP ++ ++W ++++ +A + +++LF M D +P+
Sbjct: 425 IDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNE 484
Query: 244 IALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ +S L AC G + +G+ + ++ I +VD + + A+ + E
Sbjct: 485 VTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIE 544
Query: 303 SSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
S E N+ W ++L MHG +L ++++ DG ++L
Sbjct: 545 SMHLEPNVPIWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVL 591
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 238/426 (55%), Gaps = 4/426 (0%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
N +T S+ + I T A FS MR + P+ +F LL C S
Sbjct: 19 LNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSG 78
Query: 128 S--LAQTIHSQVLKLGF-ICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S L+ +H KLG V V +++ +Y ++ A+ +FD + + V+ NT+I
Sbjct: 79 SETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMI 138
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
DGY+++G + +A ++FD+MP RD +SW ++ G+ + EEA+ F M ++PD +
Sbjct: 139 DGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYV 198
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
A+++AL+AC LG L G +HRY+ + + +S L+D Y +CG + A E+F+
Sbjct: 199 AIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKM 258
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++ + +WN+++VG A +G SLVYF +M E KPD VT GAL CSH GLV+E
Sbjct: 259 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGL 318
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F M+ YG+S ++HYGC+ DL RAG +E+AL++I+ MPM + V LL CR
Sbjct: 319 RYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRT 378
Query: 425 HGNVEI-AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HGN + AE +H+ L + Y +L+++YA +WE ++RR + +KK G
Sbjct: 379 HGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGF 438
Query: 484 SLIQLN 489
S I+++
Sbjct: 439 SSIEID 444
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 37/264 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ +F+ +P S+ +I A+V F +M+ + PD+ + L AC+
Sbjct: 150 AVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNACTN 209
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + S +H V+ F +V V NSL+ +YC + A+E+FD++ R VVS N++
Sbjct: 210 LGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSV 269
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G+ AH E++ F M + KPD
Sbjct: 270 IVGFAANGN-AH------------------------------ESLVYFRKMQEEGFKPDA 298
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ AL+AC+ +G +E+G + ++ + R++ + LVD Y++ G + A+++
Sbjct: 299 VTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHY--GCLVDLYSRAGRLEDALKV 356
Query: 301 FESSQEK-NLFTWNAMLVGLAMHG 323
ES K N ++L HG
Sbjct: 357 IESMPMKPNEVVIGSLLAACRTHG 380
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 285/562 (50%), Gaps = 89/562 (15%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +++CKT+ ++ ++H +T + I I + + + + L+YA
Sbjct: 10 SLLEKCKTMAELKRLHGLMITT-----------SVIQDVIPLSRLVDFCAYSDSGNLNYA 58
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
S+FN I PS + +N++I+ +++ SP A+ ++ +MR PD ++FPF+L+ACS +
Sbjct: 59 KSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLV 118
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
++L Q +H+ ++K GF DV+ +L+ +Y + A ++FD+I +VV+ +LI
Sbjct: 119 NGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLI 178
Query: 185 DGYV-----------------------------------KAGDLAHARQLFDRM------ 203
G + ++ DL R + DR
Sbjct: 179 AGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLD 238
Query: 204 PFRDAVSWGTLVAG-----YAQSDQCEEAIQLFCNM------------------------ 234
PF+ ++ ++A YA+ + A LF M
Sbjct: 239 PFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEA 298
Query: 235 MDL--DIK-----PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+DL D++ PD + + ACA LG L G+ +H Y+ + D+ + T LVD
Sbjct: 299 LDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDM 358
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVT 346
YAK G A ++F Q+K++ W ++++GLAMHG G +L +F +M E + PD +T
Sbjct: 359 YAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEIT 418
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L CSH G V++ + F M++V+G+ +HYGCM DLL RAG + EA +++KM
Sbjct: 419 YIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKM 478
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
P+ + +WS LL GC+I+ N+++A+ V +L+ + GVY +L+++YA A RWE+V
Sbjct: 479 PVEPNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVK 538
Query: 467 KIRRSLDAGKIKKNAGCSLIQL 488
R + KI+K+ G S +++
Sbjct: 539 MARELMKERKIQKSLGHSSVEM 560
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 215/340 (63%), Gaps = 5/340 (1%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
+V NS++ + L A+++FDE+ R++VS N ++ GY D+ AR+LFD MP
Sbjct: 225 NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMP 284
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIALVSALSACARLGELEQGK 263
+D VSW +++GYAQ+ + ++ ++LF M + +++P+ + +VS LSACA L LE+G+
Sbjct: 285 EKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGR 344
Query: 264 NIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
+H +I+ +++ +++ L L+D YAKCG + A++IF S KN+ WNA++ LAM
Sbjct: 345 WVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAM 404
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
+G R S+ F +M KP+ +T +G L CSH GLVDE R+ F M S GV E+K
Sbjct: 405 NGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVK 464
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE--HVM 439
HYGCM D+LGRAGL+EEA E+I+ MPM DV V+ LLG CR+H ++AE H +
Sbjct: 465 HYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEIHSL 524
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
L + G + +++D+YA A +W DV++ R+ + I+K
Sbjct: 525 NLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 201/402 (50%), Gaps = 22/402 (5%)
Query: 56 PTTDPLSYALSIFNNIPYPS---TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFY 112
P+ L+ AL + +PS TF +IRA +SP + FS + + PD +
Sbjct: 36 PSHPHLAAALCAVHFPLFPSSSATFLQKILIRASASSASPGLSFAAFSSLLRCGLVPDRF 95
Query: 113 SFPFLLRACSQLCSHS-LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
+ P LL + +L + +H+Q ++ GF+ DVFV+N+L+ +Y +E+F
Sbjct: 96 TLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGS 155
Query: 172 IL-YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
DVVS NT+I GYVK G++ A+++FD MP R+ VSW T+V GYA + + + A ++
Sbjct: 156 CAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREM 215
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS-TGLVDFYA 289
F M I + + S ++ AR G L + + +++ V + +S ++ Y+
Sbjct: 216 FDRM--PAIGRNVVTWNSMVTGFARHGLLPLARKM-----FDEMPVRNLVSWNAMLRGYS 268
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTIL 348
++ A E+F+ EK++ +W M+ G A G + +L F M E+ ++P+ VT++
Sbjct: 269 VNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMV 328
Query: 349 GALVGCSHAGLVDEAR---KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
L C++ ++E R D+ + V ++ E + D+ + G + A+++
Sbjct: 329 SVLSACANLTALEEGRWVHAFIDKHKMV--LNNEYNLGAALIDMYAKCGRTDIAVKIFNS 386
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL--KPED 445
+ +V W+ L+ ++GN + A E + + KP D
Sbjct: 387 LDR-KNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPND 427
>gi|297805312|ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 248/486 (51%), Gaps = 68/486 (13%)
Query: 67 IFNNIPYPSTFSYNTIIRAHT---LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+F +PYP T+ +N +I+ ++ LF ++ +L MRT PD Y+FP +++ CS
Sbjct: 62 VFERVPYPGTYLWNHLIKGYSNKFLFFETVS--LLMRMMRTGFARPDEYTFPLVMKVCSN 119
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC--- 180
+ T+H VL++GF DV + S + Y L A+++F E+ R+VVS
Sbjct: 120 NAEFRVGSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTAL 179
Query: 181 ----------------------------NTLIDGYVKAGDLAHARQLFDRMPFRDAVS-- 210
N L+DG VK+GDL +AR+LFD MP RD +S
Sbjct: 180 IVAYVKSGELEEAKRMFDLMPERNLGTWNALVDGLVKSGDLVNARKLFDEMPKRDIISYT 239
Query: 211 -----------------------------WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
W L+ GYAQ+ Q EA ++F M ++KP
Sbjct: 240 SMIDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKP 299
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS-FLSTGLVDFYAKCGYINTAIEI 300
D +V +SAC+++G E + + Y+ + + S ++ L+D AKCG+++ A ++
Sbjct: 300 DEFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVIPALIDMNAKCGHMDRAAKL 359
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +++L ++ +M+ G+A+HG G ++ F +M++ I PD V L CS + LV
Sbjct: 360 FEEMPQRDLVSYCSMMEGMAIHGCGSEAVRLFEKMVDEGIVPDEVAFTVILKVCSQSRLV 419
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E + F+ M Y + HY C+ +LL R G ++EA E+IK MP W LLG
Sbjct: 420 EEGLRYFELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLG 479
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GC +HGN EIAE A + +L+P+ G Y +L+++YA DRW D+ +R ++ IKK
Sbjct: 480 GCSLHGNTEIAEVVARQLFELEPQSAGSYVLLSNIYAALDRWADLAHLRDKMNENGIKKI 539
Query: 481 AGCSLI 486
G S I
Sbjct: 540 CGRSWI 545
>gi|449491452|ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like [Cucumis sativus]
Length = 547
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 246/433 (56%), Gaps = 26/433 (6%)
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
Y + IF +I P+TF N +I+A++L + PL AV ++ + + PD Y+F L AC+
Sbjct: 100 YTVLIFRHIKVPNTFCVNRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACA 159
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + H Q K G + + NSL+H+Y + +++FDE+ +D+VS N+
Sbjct: 160 SFGCGASGRKCHGQAFKNGVDSVMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLVSWNS 219
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ Y + GDL A +FD MP R+ VSW +++ Y + A++LF NM+++ I+ +
Sbjct: 220 IVTAYARVGDLYTAHDMFDVMPERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGN 279
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
N +V+ LSAC+R L +G+++H ++ ++ F++T LVD Y+KC ++ A +F+
Sbjct: 280 NTTMVNVLSACSRSARLNEGRSVHGFMYRASMKFCVFINTALVDMYSKCHRVSVARRVFD 339
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI---------------------EARIK 341
+NL TWNAM++G ++HG + L F M+ + ++
Sbjct: 340 RLMIRNLVTWNAMILGHSLHGNPKDGLELFEEMVGELREINEETGNGKKFKQDEGKRKVF 399
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
PD +T +G L C+ AGL+ +A FDEM +V+ V HY C+A++ GLIE+A+E
Sbjct: 400 PDQITFIGVLCACARAGLLKDAENYFDEMINVFLVRPNFGHYWCLANVYVAVGLIEQAVE 459
Query: 402 MIKKMPMGGDVF-----VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
+++ MP + F VW LL CR G+V + E A++++ ++P++ Y++L ++Y
Sbjct: 460 ILRNMPEDNEDFSSESVVWIDLLTTCRFVGDVSLGEQIAKYLIDMEPKNDSYYRLLLNIY 519
Query: 457 ANADRWEDVVKIR 469
A A RWEDV +I+
Sbjct: 520 AVAGRWEDVSRIK 532
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 122/305 (40%), Gaps = 49/305 (16%)
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
GD+ + +F + + ++ Y+ S EA+ ++ + ++PD+ +S
Sbjct: 96 GDIVYTVLIFRHIKVPNTFCVNRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLF 155
Query: 251 SACARLGELEQGKNIH-------------------------RYIELNQIRVDSFLSTGLV 285
SACA G G+ H ++IEL + D + LV
Sbjct: 156 SACASFGCGASGRKCHGQAFKNGVDSVMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLV 215
Query: 286 DF------YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
+ YA+ G + TA ++F+ E+N+ +WN M+ G ++ F M+
Sbjct: 216 SWNSIVTAYARVGDLYTAHDMFDVMPERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVG 275
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC------MADLLGRA 393
I+ + T++ L CS + ++E R SV+G C + D+ +
Sbjct: 276 IRGNNTTMVNVLSACSRSARLNEGR-------SVHGFMYRASMKFCVFINTALVDMYSKC 328
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN----VEIAEAAAEHVMKLKPEDGGVY 449
+ A + ++ M ++ W+ ++ G +HGN +E+ E + ++ E G
Sbjct: 329 HRVSVARRVFDRL-MIRNLVTWNAMILGHSLHGNPKDGLELFEEMVGELREINEETGNGK 387
Query: 450 KVLAD 454
K D
Sbjct: 388 KFKQD 392
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 231/402 (57%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P ++ ++ + + A++LF M+ + PD +L C+
Sbjct: 123 ARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLSTCAH 182
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + IHS +L + D V +LM++Y + A++L++ + +++V T+
Sbjct: 183 TRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSEKEIVLSTTM 242
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY K G + A +F+ MP +D VSW ++AGYA+S + EA+ LF +M +KPD
Sbjct: 243 VYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVKPDE 302
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I ++S +SACA +G LE+ + IH ++E + + + L+D ++KCG + A+++F +
Sbjct: 303 ITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKCGSLTLALDVFNA 362
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+KN+ TW +++ AMHG GR +L F M I+P+GVT LG L C HAGLV+E
Sbjct: 363 MPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEG 422
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R LF M Y + +HYGCM DLLGRA L+ +A ++I+ M + +V +W LL CR
Sbjct: 423 RLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACR 482
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
+HG++E+ AA+ +++L P GG +L+++YA W DV
Sbjct: 483 MHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDV 524
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 65/358 (18%)
Query: 102 MRTVSIP-PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
+R V +P P + P LLRA + S A H ++G D FV +L+ Y
Sbjct: 59 LRRVGLPAPGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACG 118
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
R+ DA+ +FD + RD+V+ ++D Y +A +
Sbjct: 119 RVEDARRVFDGMPDRDLVAWGVMLDCYCQARNY--------------------------- 151
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
EEA+ LF +M + PD + + + LS CA L GK IH Y+ ++ +D+ +
Sbjct: 152 ----EEALLLFHSMKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQV 207
Query: 281 STGLVDFYAKC-------------------------------GYINTAIEIFESSQEKNL 309
S L++ YA C G + A IF K++
Sbjct: 208 SCALMNMYASCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDV 267
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+W+AM+ G A +L F M + +KPD +T+L + C++ G +++AR +
Sbjct: 268 VSWSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSF 327
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+E+ + + K L + D+ + G + AL++ MP +V W+ ++ +HG+
Sbjct: 328 VEN-HSMCKILPIGNALIDMFSKCGSLTLALDVFNAMPQ-KNVVTWTSIITASAMHGD 383
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 238/415 (57%), Gaps = 4/415 (0%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQ 136
S+N +I + A+ +FS+M S PD ++ L AC+ L + L + IH+
Sbjct: 244 SWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAH 303
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR--DVVSCNTLIDGYVKAGDLA 194
+++ F V N+L+ +Y + AQ++ ++ + DV++ L+DGYVK GD+
Sbjct: 304 IIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDIN 363
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
AR++FD + RD V+W ++ GY Q+ ++A++LF +M+ KP+N L + LS +
Sbjct: 364 PARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSS 423
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE-SSQEKNLFTWN 313
L L+ G+ IH + +S L+ YAK G IN A +F +++ TW
Sbjct: 424 SLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWT 483
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
+M++ LA HGLG +L F RM+E IKPD +T +G L C+H GLV++ R ++ M++
Sbjct: 484 SMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNA 543
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
+ + HY CM DL GRAGL++EA I+ MP+ DV W LL C++H NVE+AE
Sbjct: 544 HKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEV 603
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
AAE ++ ++PE+ G Y LA+VY+ +WE+ IR+S+ +KK+ G S +Q+
Sbjct: 604 AAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQI 658
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 194/420 (46%), Gaps = 37/420 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F +P P + S+ +I + NA+ +F +M + +PP ++ +L +
Sbjct: 95 LEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLAS 154
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + + +HS V+K G + V NSL+++Y A+ +FD + + S
Sbjct: 155 CAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSW 214
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
NT+I ++++G + A+ F++M RD VSW +++GY Q EA+ +F M MD
Sbjct: 215 NTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSS 274
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYI-------------------------ELNQ- 273
KPD L SALSACA L L+ GK IH +I E+ Q
Sbjct: 275 KPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQK 334
Query: 274 -------IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
+D T L+D Y K G IN A IF+S + +++ W AM+VG +G +
Sbjct: 335 IIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQ 394
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCM 386
++ F MI+ KP+ T+ L S +D R++ + G + + +
Sbjct: 395 DAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHAS-ATRSGNASSVSVSNAL 453
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPE 444
+ ++G I +A + + D W+ ++ HG E A E +++ +KP+
Sbjct: 454 ITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPD 513
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 181/369 (49%), Gaps = 44/369 (11%)
Query: 100 SQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
S + ++ P D Y+ FL R+ + ++IH++++K G VF++N+LM+ Y
Sbjct: 4 SSSQILTSPSDPYT-SFLQRSL-KFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKT 61
Query: 160 HRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA 219
+ DA +FDE+ + V S N ++ GY K G L A ++F+ MP D+VSW ++ GY
Sbjct: 62 GFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYN 121
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
Q Q E AI +F M+ D+ P L + L++CA + L G+ +H ++ + +
Sbjct: 122 QMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYIS 181
Query: 280 LSTGLVDFYAK-------------------------------CGYINTAIEIFESSQEKN 308
++ L++ YAK G ++ A FE E++
Sbjct: 182 VANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERD 241
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +WNAM+ G HG R +L FS+M+ ++ KPD T+ AL C++ E KL
Sbjct: 242 VVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANL----ENLKLG 297
Query: 368 DEMESVYGVSKELKHYGCMADLL----GRAGLIEEALEMIKK-MPMGGDVFVWSGLLGGC 422
++ + + + E +G + + L ++G +E A ++I++ M DV ++ LL G
Sbjct: 298 KQIHA-HIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGY 356
Query: 423 RIHGNVEIA 431
G++ A
Sbjct: 357 VKLGDINPA 365
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 236/427 (55%), Gaps = 1/427 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A + + +P + S+ T+I H A+ L+SQM P+ F +L AC+
Sbjct: 332 ARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACAT 391
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L IH+ LK+G ++FV +SL+ +YC + AQ +F+ + ++ V N+L
Sbjct: 392 LQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSL 451
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY G + A LF++MP R++VSW T+++GYA++ + +A+ F M+ P
Sbjct: 452 ISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGE 511
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I L S L ACA L LE G+ +H I I + F+ T L D YAK G ++++ +F
Sbjct: 512 ITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQ 571
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
EKN TW AM+ GLA +G S+ F MIE I P+ T L L CSH GLV++A
Sbjct: 572 MPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQA 631
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
F+ M++ +G+ + KHY CM D+L RAG + EA E++ K+ D WS LL C
Sbjct: 632 IHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACS 690
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+ N EI E AA+ + +L+ ++ Y +L+++YA+ +W+D + R + +KK+AGC
Sbjct: 691 TYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLKKDAGC 750
Query: 484 SLIQLNG 490
S +QL G
Sbjct: 751 SWLQLRG 757
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 185/406 (45%), Gaps = 50/406 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ ++ P S + +I +A +F +M T S+ P+ + +++AC
Sbjct: 199 AVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVG 258
Query: 124 LCSHSLAQTIHSQVLKLGFICDVF-----VLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
LA V+ L C++F V NSL+ +Y A +FD++ RDVV
Sbjct: 259 AGEFDLAM----GVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVV 314
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S L+D Y GDL AR++ D MP R+ VSWGTL+A + Q EA++L+ M+
Sbjct: 315 SWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADG 374
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS----FLSTGLVDFYAKCGYI 294
+P+ S LSACA L +L G IH N +++ S F+S+ L+D Y KC
Sbjct: 375 CRPNISCFSSVLSACATLQDLRGGTRIH----ANALKMGSSTNLFVSSSLIDMYCKCKQC 430
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHG--------LGRL------------------- 327
A +F S EKN WN+++ G + +G ++
Sbjct: 431 TYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENR 490
Query: 328 ----SLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
+L YF M+ + P +T+ L+ C++ ++ R + E+ + G+ +
Sbjct: 491 RFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKL-GIEDNIFMG 549
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
++D+ ++G ++ + + +MP ++ W+ ++ G +G E
Sbjct: 550 TALSDMYAKSGDLDSSRRVFYQMPEKNNI-TWTAMVQGLAENGFAE 594
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 65/288 (22%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM---RTVS------------ 106
+YA +FN++P +T +N++I ++ + A LF++M +VS
Sbjct: 431 TYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENR 490
Query: 107 -----------------IPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVL 149
IP + + +L AC+ LCS + + +H++++KLG ++F+
Sbjct: 491 RFGDALNYFYAMLASGHIPGEI-TLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMG 549
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
+L D Y K+GDL +R++F +MP ++ +
Sbjct: 550 TALS-------------------------------DMYAKSGDLDSSRRVFYQMPEKNNI 578
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
+W +V G A++ EE+I LF +M++ I P+ ++ L AC+ G +EQ + +
Sbjct: 579 TWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETM 638
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF-ESSQEKNLFTWNAML 316
+ + I S T +VD A+ G + A E+ + S E + +W+++L
Sbjct: 639 QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLL 686
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 154/394 (39%), Gaps = 73/394 (18%)
Query: 91 SPLNAVVLFSQMRTVSIPP------DFYSFP----FLLRACSQLCSHS------------ 128
SPL + ++R + PP DF ++ LLR C + + S
Sbjct: 36 SPLTLPIKAFKLRLANGPPLASTAKDFKTYSETCASLLRLCRAMSATSTTMPSYAPSSGC 95
Query: 129 --LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRD---------------------- 164
L ++H+ + G D V ++L+ Y F R D
Sbjct: 96 LPLVLSLHAHAFRSGLTADRSVASNLLTAYAAFTRAADRDQAFRDCVAADAASSFTYDFM 155
Query: 165 ------------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
A+ LF + + VVS T++D +K G + A +L++R P +
Sbjct: 156 VSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFT 215
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN-IHRYIEL 271
+++G+ +++ ++A +F M+ ++P+ + L+ + AC GE + + ++
Sbjct: 216 AMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKC 275
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
N + L+ Y + G A +F+ + +++ +W A+L A G L
Sbjct: 276 NLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLG----DLYG 331
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM------ESVYGVSKELKHYGC 385
R+++A + V+ + G EA KL+ +M ++ S L
Sbjct: 332 ARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACAT 391
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+ DL G + AL KM ++FV S L+
Sbjct: 392 LQDLRGGTRIHANAL----KMGSSTNLFVSSSLI 421
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 270/486 (55%), Gaps = 34/486 (6%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++RC + + HAH L L+ L+ +L + + ++A + + SYA
Sbjct: 23 SLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASCVSAPAPAAAQAAAS---SYA 79
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
++F+ IP P+ F YN++IRA S V +R S P+ ++ F L+AC+ +
Sbjct: 80 RNLFDQIPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAV 139
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H+Q L+ G +V L+++Y ++ A+ +FD +
Sbjct: 140 PAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGM------------ 187
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
AGD ++ V+W +V+GY++ EA+ LF M + ++PD +
Sbjct: 188 -----AGD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEV 229
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VS +SACA+ G L+ GK +H YI+ I VD LST L+D YAKCG I A +F++
Sbjct: 230 TMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAM 289
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
EK+ W+AM+VG A+HGL +L FSRM+E +++P+ VT +G L C+H+GLV++ R
Sbjct: 290 VEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGR 349
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ + M+++ G+ +++YGCM DLL R+GL+++A + MP+ + +W LL C+
Sbjct: 350 RYWSIMQNL-GIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKS 408
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
++IAE+A + +++L+P + Y +L+++YA+ +W+ V +RR + + AG S
Sbjct: 409 SNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRS 468
Query: 485 LIQLNG 490
I++NG
Sbjct: 469 SIEING 474
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 251/492 (51%), Gaps = 39/492 (7%)
Query: 35 HILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN 94
H++ L +T F + LS A +F+ IP + + + A
Sbjct: 52 HLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEE 111
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ FS+M+ + P+ + P +L+AC L + +H+ +LK F D +++++L++
Sbjct: 112 ALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIY 171
Query: 155 VYCVFHRLRDAQELFDEILYRD-----------------------------------VVS 179
+Y + A +FD I+ +D VVS
Sbjct: 172 MYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVS 231
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
NTLI G+ + GD + ++F M D VSW ++++G+ Q+ E F M+
Sbjct: 232 WNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEML 291
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
D P ++ + S L AC + L GK IH Y + + D ++ + LVD YAKCGYI+
Sbjct: 292 DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYIS 351
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A +F E+N TWN+++ G A HG ++ F++M E+ K D +T L CS
Sbjct: 352 EAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS 411
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAG+V+ LF +M+ Y + L+HY CM DLLGRAG + EA ++IK MP+ D FVW
Sbjct: 412 HAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVW 471
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LLG CR HGN+E+AE AAEH+ +L+PE G +L+++YA+A RW + K+++ +
Sbjct: 472 GALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQR 531
Query: 476 KIKKNAGCSLIQ 487
K K GCS I+
Sbjct: 532 KFGKFPGCSWIE 543
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 135/332 (40%), Gaps = 36/332 (10%)
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ +H+ ++ +G + LM Y +L +A++LFD+I
Sbjct: 46 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI----------------- 88
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
P + W L A+ EEA+ F M ++P+ L S
Sbjct: 89 --------------PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSI 134
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L AC L + G+N+H I N D+++ + L+ Y+KCG++ A +F+ +K+L
Sbjct: 135 LKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDL 194
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
NAM+ G A HG +L +M +A +KP+ V+ + G S G ++F
Sbjct: 195 VVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRL 254
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCRIHG 426
M + GV ++ + + + E + K+M G S LL C
Sbjct: 255 M-TANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVA 313
Query: 427 NVEIAEAAAEHVMKLKPE-DGGVYKVLADVYA 457
N+ + + M + E D V L D+YA
Sbjct: 314 NLRHGKEIHGYAMVIGVEKDVYVRSALVDMYA 345
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 43/211 (20%)
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
A+ AR L +G+ +H ++ + + ++ + L+ FY +CG ++ A ++F+ N
Sbjct: 33 AIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTN 92
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH------------ 356
+ W + A G +L FS M + ++P+ + L C H
Sbjct: 93 IRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHT 152
Query: 357 -----------------------AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
G V++A ++FD + V K+L M +
Sbjct: 153 VILKNSFESDAYIISALIYMYSKCGHVEKACRVFD-----WIVDKDLVVMNAMVSGYAQH 207
Query: 394 GLIEEALEMIKKMPMGG---DVFVWSGLLGG 421
G + EAL +++KM G +V W+ L+ G
Sbjct: 208 GFVHEALNLVQKMQQAGVKPNVVSWNTLIAG 238
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 261/494 (52%), Gaps = 52/494 (10%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + C + ++ QIHA + S + + IL+ + YA
Sbjct: 30 HLLTDCTDLSKLKQIHAQAIRNFSTHNSSLFLYSRILHVSSLID------------FDYA 77
Query: 65 LSIFNNIPYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
+FN I P++F +NT+I A +L + + + S+ PD ++FPFLL+AC+
Sbjct: 78 CRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACA 137
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + S + H+Q+ KLG DV+V NSL+H+Y SC
Sbjct: 138 YVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLY---------------------ASC-- 174
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
G L+ A ++F++MP R VSW ++ Y QS E A++LF M + +PD
Sbjct: 175 --------GCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQN-SFEPD 225
Query: 243 NIALVSALSACARLGELEQGKNIHRYI---ELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ S +SACA +G L G H Y+ + D +++ LVD Y+KCG + A +
Sbjct: 226 GYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQ 285
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAG 358
+FE+ + +L +WN+M++ LAMHG G+ +L FSR++E + P+ VT +G L C+H G
Sbjct: 286 VFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGG 345
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V + RK FD M + Y + L+HYGC+ DLL R+G I+EALE++ M + D +W L
Sbjct: 346 MVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSL 405
Query: 419 LGGC-RIHGNVEIAEAAAEHVMKL-KPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
L C + + VE++E A +++ K GVY +L+ VYA+A +W DV IR+ +
Sbjct: 406 LDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMG 465
Query: 477 IKKNAGCSLIQLNG 490
+ K GCS I+++G
Sbjct: 466 VTKEPGCSSIEIDG 479
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 264/497 (53%), Gaps = 59/497 (11%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + Q+ Q+HA L P T LY I SS +D ++YA +F+
Sbjct: 115 CSDMSQLKQLHAFTLRTTY----PEEPATLFLYG-----KILQLSSSFSD-VNYAFRVFD 164
Query: 70 NIPYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCS 126
+I S+F +NT+IRA H + S A +L+ +M PD ++FPF+L+AC+ +
Sbjct: 165 SIENHSSFMWNTLIRACAHDV-SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 223
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S + +H Q++K GF DV+V N L+H+Y SC L
Sbjct: 224 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYG---------------------SCGCL--- 259
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
DLA R++FD MP R VSW +++ + + + A+QLF M +PD +
Sbjct: 260 -----DLA--RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF-REMQRSFEPDGYTM 311
Query: 247 VSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S LSACA LG L G H ++ + +D + L++ Y KCG + A ++F+
Sbjct: 312 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 371
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR--IKPDGVTILGALVGCSHAGLVD 361
Q+++L +WNAM++G A HG ++ +F RM++ R ++P+ VT +G L+ C+H G V+
Sbjct: 372 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 431
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ R+ FD M Y + L+HYGC+ DL+ RAG I EA++M+ MPM D +W LL
Sbjct: 432 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 491
Query: 422 CRIHG-NVEIAEAAAEHVMKLKPED-------GGVYKVLADVYANADRWEDVVKIRRSLD 473
C G +VE++E A +++ K ++ G Y +L+ VYA+A RW DV +R+ +
Sbjct: 492 CCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMS 551
Query: 474 AGKIKKNAGCSLIQLNG 490
I+K GCS I++NG
Sbjct: 552 EHGIRKEPGCSSIEING 568
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 258/495 (52%), Gaps = 59/495 (11%)
Query: 1 MTLNNFIKRCKT---IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPT 57
+T + IK C +++ ++H H KG + ++ T+L F + A
Sbjct: 56 ITYSELIKCCSARGAVQEGKRVHEHIFCKG--YEPKMFVVNTLLNMYVKFNLLEEAED-- 111
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN--AVVLFSQMRTVSIPPDFYSFP 115
+F+ +P + S+ T+I A +S+ LN A+ M + P+ +++
Sbjct: 112 ---------LFDEMPERNVVSWTTMISA---YSNKLNDKALKCLILMFREGVRPNMFTYS 159
Query: 116 FLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
+LRAC L + + +H ++K G DVFV ++L
Sbjct: 160 SVLRACDGLPN---LRQLHCGIIKTGLESDVFVRSAL----------------------- 193
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
ID Y K DL +A +FD MP RD V W +++ G+AQ+ EA+ LF M
Sbjct: 194 --------IDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMK 245
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYI 294
D L S L AC L LE G+ +H ++ + +Q D L+ L+D Y KCG +
Sbjct: 246 RAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQ---DLILNNALIDMYCKCGSL 302
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A F EK++ +W+ M+ GLA +G R +L F M E+ +P+ +T+LG L C
Sbjct: 303 EDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFAC 362
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
SHAGLV++ F M+ ++GV +HYGC+ DLLGRAG ++EA+++I +M D
Sbjct: 363 SHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVT 422
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LLG CR+H NV++A AA+ +++L+PED G Y +L+++YAN RWEDV ++R+++
Sbjct: 423 WRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTN 482
Query: 475 GKIKKNAGCSLIQLN 489
I+K GCS I+++
Sbjct: 483 RGIRKTPGCSWIEVD 497
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 39/317 (12%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D ++ L++ CS + + +H + G+ +FV+N+L+++Y F+ L +A++LF
Sbjct: 54 DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF 113
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
DE+ R+VVS T+I Y + +L D+ A++
Sbjct: 114 DEMPERNVVSWTTMISAY--------SNKLNDK------------------------ALK 141
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
M ++P+ S L AC L L Q +H I + D F+ + L+D Y+
Sbjct: 142 CLILMFREGVRPNMFTYSSVLRACDGLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYS 198
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
K ++ A+ +F+ ++L WN+++ G A + G +L F RM A D T+
Sbjct: 199 KWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTS 258
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L C+ L++ R++ V ++L + D+ + G +E+A +M +
Sbjct: 259 VLRACTGLALLELGRQVH---VHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRM-VE 314
Query: 410 GDVFVWSGLLGGCRIHG 426
DV WS ++ G +G
Sbjct: 315 KDVISWSTMVAGLAQNG 331
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 270/486 (55%), Gaps = 34/486 (6%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++RC + + HAH L L+ L+ +L + + ++A + + SYA
Sbjct: 72 SLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASCVSAPAPAAAQAAAS---SYA 128
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
++F+ IP P+ F YN++IRA S V +R S P+ ++ F L+AC+ +
Sbjct: 129 RNLFDQIPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAV 188
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H+Q L+ G +V L+++Y ++ A+ +FD +
Sbjct: 189 PAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGM------------ 236
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
AGD ++ V+W +V+GY++ EA+ LF M + ++PD +
Sbjct: 237 -----AGD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEV 278
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VS +SACA+ G L+ GK +H YI+ I VD LST L+D YAKCG I A +F++
Sbjct: 279 TMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAM 338
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
EK+ W+AM+VG A+HGL +L FSRM+E +++P+ VT +G L C+H+GLV++ R
Sbjct: 339 VEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGR 398
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ + M+++ G+ +++YGCM DLL R+GL+++A + MP+ + +W LL C+
Sbjct: 399 RYWSIMQNL-GIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKS 457
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
++IAE+A + +++L+P + Y +L+++YA+ +W+ V +RR + + AG S
Sbjct: 458 SNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRS 517
Query: 485 LIQLNG 490
I++NG
Sbjct: 518 SIEING 523
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 233/429 (54%), Gaps = 31/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A IF + + S+N II A + ++ F++M + PD +++ +L+A
Sbjct: 402 LMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKA 461
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L S +H +V+K G D FV
Sbjct: 462 CAALRSLEYGLMVHDKVIKSGLGSDAFV-------------------------------A 490
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+T++D Y K G + A++L DR+ + VSW +++G++ + + EEA + F M+D+ +K
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD+ + L CA L +E GK IH I ++ D ++S+ LVD YAKCG + ++ +
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE ++++ +WNAM+ G A+HGLG +L F RM + + P+ T + L CSH GL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F M + Y + +L+H+ CM D+LGR+ +EA++ I MP D +W LL
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C+I +VEIAE AA +V+ L P+D VY +L++VYA + +W DV + RR L G++KK
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 481 AGCSLIQLN 489
GCS I++
Sbjct: 791 PGCSWIEVQ 799
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 173/404 (42%), Gaps = 50/404 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A+++F+ +P P S+N ++ + +V LF +M + PD +F LL++
Sbjct: 99 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 158
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L SL +H+ +K G L DV +
Sbjct: 159 CSALEELSLGVQVHALAVKTG-------------------------------LEIDVRTG 187
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ L+D Y K L A F MP R+ VSWG +AG Q++Q ++LF M L +
Sbjct: 188 SALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 247
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ SA +CA + L G+ +H + N+ D + T +VD YAK + A
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + T NAM+VGL GLG ++ F MI + I+ D V++ G C+
Sbjct: 308 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET--- 364
Query: 361 DEARKLFDEMESVY------GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
K + + + V+ G ++ + DL G+ + EA + + M D
Sbjct: 365 ----KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ-KDSVS 419
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMK--LKPED---GGVYKVLA 453
W+ ++ +G+ + +++ +KP+D G V K A
Sbjct: 420 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 167/369 (45%), Gaps = 33/369 (8%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
+ L+ A F +P + + N ++ + A+ LF M SI D S +
Sbjct: 298 ANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGV 357
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
AC++ + Q +H +K GF D+ V N+++ +Y
Sbjct: 358 FSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG-------------------- 397
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
C L++ Y+ +F M +D+VSW ++A Q+ ++ I F M+
Sbjct: 398 -KCKALMEAYL----------IFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 446
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+KPD+ S L ACA L LE G +H + + + D+F+++ +VD Y KCG I+ A
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++ + + + +WNA+L G +++ + +FS M++ +KPD T L C++
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
++ +++ ++ + E + D+ + G + ++L + +K+ D W+
Sbjct: 567 ATIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDSLLVFEKVEK-RDFVSWNA 624
Query: 418 LLGGCRIHG 426
++ G +HG
Sbjct: 625 MICGYALHG 633
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS--QVLKLGFICDVFVLNSLMHVYCV 158
Q + + P +F + ++C+Q +LA + +++ GF+ FV N L+ +Y
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYAR 64
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
A+ +FD + RD VS NT++ Y AGD++ A LFD MP D VSW LV+GY
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGY 124
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
Q +E++ LF M + PD L +C+ L EL G +H + +D
Sbjct: 125 CQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDV 184
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
+ LVD Y KC ++ A+ F E+N +W A + G + L F M
Sbjct: 185 RTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRL 244
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKL 366
+ + A C+ ++ R+L
Sbjct: 245 GLGVSQPSYASAFRSCAAMSCLNTGRQL 272
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 36/400 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L AL F +P + S+ I + + LF +M+ + + S+ R+
Sbjct: 200 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + + +H+ +K F D V +++ VY + L DA+ F + V +
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ G V+AG G EA+ LF M+ I+
Sbjct: 320 NAMMVGLVRAG-------------------LGI------------EAMGLFQFMIRSSIR 348
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D ++L SACA QG+ +H + VD ++ ++D Y KC + A I
Sbjct: 349 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K+ +WNA++ L +G ++++F+ M+ +KPD T L C+ +
Sbjct: 409 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 468
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + D++ G+ + + D+ + G+I+EA ++ ++ G V W+ +L
Sbjct: 469 EYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVVSWNAILS 526
Query: 421 GCRIHGNVEIAEAAAEHV--MKLKPEDGGVYKVLADVYAN 458
G ++ E A+ + M LKP D + + D AN
Sbjct: 527 GFSLNKESEEAQKFFSEMLDMGLKP-DHFTFATVLDTCAN 565
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 270/493 (54%), Gaps = 49/493 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ ++RC ++ + HAHFL L L T +A++ +A+S TT SYA
Sbjct: 25 SLVRRCPGLRALRGAHAHFLRLRLPRL-------TYAFALSKLLASCAAASATTVASSYA 77
Query: 65 LSIFNNIPYPSTFSYNTIIRA-----HTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLL 118
++F+ IP P+ F YN++IRA + S + +L+ +M P P+ ++ F+L
Sbjct: 78 RALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFVL 137
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+AC+ L Q +H+Q G +V L+++Y
Sbjct: 138 KACTALGE---GQQLHAQAFGHGLEPSPYVQTGLLNLY---------------------- 172
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRM-PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+ ++A AR +FD M ++ V+W +++ GY++ EA+ LF +M +
Sbjct: 173 ---------ARCEEVALARNVFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAV 223
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ PD + +VS +SACA+ G L+ GK +H +I+ I VD LST L+D YAKCG I A
Sbjct: 224 GVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERA 283
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+S E++ W+AM+VGLAMHGL +L FSRM++ +++P+ VT +G L C+H+
Sbjct: 284 KSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHS 343
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLVD+ R+ + M+ + G+ +++YGCM DLL R+GL++EA + MP+ + +W
Sbjct: 344 GLVDDGRRYWCTMQEL-GIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIWRN 402
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LL + ++I E A+ + +L+P++ Y +L+++YA +W+ V +R+ + +
Sbjct: 403 LLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKDNNV 462
Query: 478 KKNAGCSLIQLNG 490
AGCS I++NG
Sbjct: 463 TVVAGCSSIEING 475
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 133/321 (41%), Gaps = 50/321 (15%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL +K C + + Q+HA GL P + T L + + +
Sbjct: 132 TLAFVLKACTALGEGQQLHAQAFGHGL---EPSPYVQTGLLNLYA----------RCEEV 178
Query: 62 SYALSIFNN-IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A ++F+ + + +++++I ++ A+ LF M+ V + PD + ++ A
Sbjct: 179 ALARNVFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISA 238
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ + L + +H+ + + G D+ + +L+ +Y + A+ +FD ++ RD +
Sbjct: 239 CAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKA- 297
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
W ++ G A E+A+ LF M+ L ++
Sbjct: 298 ------------------------------WSAMIVGLAMHGLAEDALGLFSRMLQLKVR 327
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST--GLVDFYAKCGYINTAI 298
P+N+ V LSACA G ++ G+ + + ++ +++ + +VD + G ++ A
Sbjct: 328 PNNVTFVGVLSACAHSGLVDDGRRY--WCTMQELGIEASMENYGCMVDLLCRSGLLDEAF 385
Query: 299 EIFESSQ-EKNLFTWNAMLVG 318
N W +LV
Sbjct: 386 SFVTGMPISPNSVIWRNLLVA 406
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 254/491 (51%), Gaps = 47/491 (9%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
M++ R +KQ QIH + G +++ + T +L + + S
Sbjct: 411 MSILGACSRPSALKQGRQIHDRIIKAG--YITDDRVRTALL---SMYAKCGS-------- 457
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A ++F I + ++N +I A+ NAV F + I PD +F +L
Sbjct: 458 LMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNV 517
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + L + + S +++ GF D+ + N+L+ ++
Sbjct: 518 CKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMF------------------------ 553
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
V GDL A LF+ MP RD VSW T++AG+ Q + + A F M + +K
Sbjct: 554 -------VNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVK 606
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD I L+ACA L +G+ +H I + D + TGL+ Y KCG I+ A +
Sbjct: 607 PDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLV 666
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + +KN+++W +M+ G A HG G+ +L F +M + +KPD +T +GAL C+HAGL+
Sbjct: 667 FHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLI 726
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
E F+ M+ + + ++HYGCM DL GRAGL+ EA+E I KM + D +W LLG
Sbjct: 727 KEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLG 785
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR-SLDAGKIKK 479
C++H +VE+AE A+ ++L P D GVY +L+++YA A W++V K+R+ LD G +KK
Sbjct: 786 ACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKK 845
Query: 480 NAGCSLIQLNG 490
G S I+++G
Sbjct: 846 -PGQSWIEVDG 855
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 202/429 (47%), Gaps = 41/429 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ +P +S+N ++ + A L QM + PD Y+F ++L AC+
Sbjct: 158 AKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD 217
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + S +L G+ D+FV +L
Sbjct: 218 AKNVDKGGELFSLILNAGWDTDLFVGTAL------------------------------- 246
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+ ++K G + A ++F+ +P RD ++W +++ G A+ Q ++A LF M + ++PD
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+A VS L AC LEQGK +H ++ + + ++ T L+ Y KCG + A+E+F
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+ +N+ +W AM+ G A HG + ++F++MIE+ I+P+ VT + L CS + +
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R++ D + G + + + + + G + +A + +++ +V W+ ++
Sbjct: 427 RQIHDRIIKA-GYITDDRVRTALLSMYAKCGSLMDARNVFERISK-QNVVAWNAMITAYV 484
Query: 424 IHGNVEIAEAAAEHVMK--LKPEDGGVYKVLADVYANAD-----RWEDVVKIRRSLDAGK 476
H + A A + ++K +KP D + + +V + D +W + IR ++
Sbjct: 485 QHEKYDNAVATFQALLKEGIKP-DSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDL 543
Query: 477 IKKNAGCSL 485
+NA S+
Sbjct: 544 HIRNALVSM 552
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 159/368 (43%), Gaps = 33/368 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL +FNN+P ++ ++I A LF M + PD +F LL+AC+
Sbjct: 259 ALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNH 318
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + +H+++ ++G +++V +L+ +Y + DA E+F+ + R+VVS +
Sbjct: 319 PEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAM 378
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G +AQ + EEA F M++ I+P+
Sbjct: 379 IAG-------------------------------FAQHGRMEEAFLFFNKMIESGIEPNR 407
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +S L AC+R L+QG+ IH I D + T L+ YAKCG + A +FE
Sbjct: 408 VTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFER 467
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
++N+ WNAM+ H ++ F +++ IKPD T L C + E
Sbjct: 468 ISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDAL-EL 526
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
K + G +L + + G + A+ + MP D+ W+ ++ G
Sbjct: 527 GKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFV 585
Query: 424 IHGNVEIA 431
HG + A
Sbjct: 586 QHGENQFA 593
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
+++ Q EA+ + ++ I+ S L C + L G+ IH +I+ ++I+ D
Sbjct: 80 SKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDI 139
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
F+ L+ YAKCG N+A +IF+ +K++++WN +L G H + +M++
Sbjct: 140 FMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQD 199
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEE 398
+KPD T + L C+ A VD+ +LF + + G +L + ++ + G +++
Sbjct: 200 GVKPDKYTFVYMLNACADAKNVDKGGELFSLILNA-GWDTDLFVGTALINMHIKCGGVDD 258
Query: 399 ALEMIKKMPMGGDVFVWSGLLGGCRIH 425
AL++ +P D+ W+ ++ G H
Sbjct: 259 ALKVFNNLPR-RDLITWTSMITGLARH 284
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 233/429 (54%), Gaps = 31/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A IF + + S+N II A + ++ F++M + PD +++ +L+A
Sbjct: 402 LMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKA 461
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L S +H +V+K G D FV
Sbjct: 462 CAALRSLEYGLMVHDKVIKSGLGSDAFV-------------------------------A 490
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+T++D Y K G + A++L DR+ + VSW +++G++ + + EEA + F M+D+ +K
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD+ + L CA L +E GK IH I ++ D ++S+ LVD YAKCG + ++ +
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE ++++ +WNAM+ G A+HGLG +L F RM + + P+ T + L CSH GL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F M + Y + +L+H+ CM D+LGR+ +EA++ I MP D +W LL
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C+I +VEIAE AA +V+ L P+D VY +L++VYA + +W DV + RR L G++KK
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 481 AGCSLIQLN 489
GCS I++
Sbjct: 791 PGCSWIEVQ 799
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 173/404 (42%), Gaps = 50/404 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A+++F+ +P P S+N ++ + +V LF +M + PD +F LL++
Sbjct: 99 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 158
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L SL +H+ +K G L DV +
Sbjct: 159 CSALEELSLGVQVHALAVKTG-------------------------------LEIDVRTG 187
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ L+D Y K L A F MP R+ VSWG +AG Q++Q ++LF M L +
Sbjct: 188 SALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 247
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ SA +CA + L G+ +H + N+ D + T +VD YAK + A
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + T NAM+VGL GLG ++ F MI + I+ D V++ G C+
Sbjct: 308 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET--- 364
Query: 361 DEARKLFDEMESVY------GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
K + + + V+ G ++ + DL G+ + EA + + M D
Sbjct: 365 ----KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ-KDSVS 419
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMK--LKPED---GGVYKVLA 453
W+ ++ +G+ + +++ +KP+D G V K A
Sbjct: 420 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 167/369 (45%), Gaps = 33/369 (8%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
+ L+ A F +P + + N ++ + A+ LF M SI D S +
Sbjct: 298 ANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGV 357
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
AC++ + Q +H +K GF D+ V N+++ +Y
Sbjct: 358 FSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG-------------------- 397
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
C L++ Y+ +F M +D+VSW ++A Q+ ++ I F M+
Sbjct: 398 -KCKALMEAYL----------IFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 446
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+KPD+ S L ACA L LE G +H + + + D+F+++ +VD Y KCG I+ A
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++ + + + +WNA+L G +++ + +FS M++ +KPD T L C++
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
++ +++ ++ + E + D+ + G + ++L + +K+ D W+
Sbjct: 567 ATIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDSLLVFEKVEK-RDFVSWNA 624
Query: 418 LLGGCRIHG 426
++ G +HG
Sbjct: 625 MICGYALHG 633
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS--QVLKLGFICDVFVLNSLMHVYCV 158
Q + + P +F + ++C+Q +LA + +++ GF+ + FV N L+ +Y
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYAR 64
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
A+ +FD + RD VS NT++ Y AGD++ A LFD MP D VSW LV+GY
Sbjct: 65 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGY 124
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
Q +E++ LF M + PD L +C+ L EL G +H + +D
Sbjct: 125 CQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDV 184
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
+ LVD Y KC ++ A+ F E+N +W A + G + L F M
Sbjct: 185 RTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRL 244
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKL 366
+ + A C+ ++ R+L
Sbjct: 245 GLGVSQPSYASAFRSCAAMSCLNTGRQL 272
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 36/400 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L AL F +P + S+ I + + LF +M+ + + S+ R+
Sbjct: 200 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 259
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + + +H+ +K F D V +++ VY + L DA+ F + V +
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ G V+AG G EA+ LF M+ I+
Sbjct: 320 NAMMVGLVRAG-------------------LGI------------EAMGLFQFMIRSSIR 348
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D ++L SACA QG+ +H + VD ++ ++D Y KC + A I
Sbjct: 349 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K+ +WNA++ L +G ++++F+ M+ +KPD T L C+ +
Sbjct: 409 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 468
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + D++ G+ + + D+ + G+I+EA ++ ++ G V W+ +L
Sbjct: 469 EYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVVSWNAILS 526
Query: 421 GCRIHGNVEIAEAAAEHV--MKLKPEDGGVYKVLADVYAN 458
G ++ E A+ + M LKP D + + D AN
Sbjct: 527 GFSLNKESEEAQKFFSEMLDMGLKP-DHFTFATVLDTCAN 565
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 248/438 (56%), Gaps = 17/438 (3%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLR 119
L A F+ +P S S+N ++ + +P + LF+ M + ++ PD ++ ++
Sbjct: 216 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVIS 275
Query: 120 ACSQLCSHSLAQTIHSQVLKL----GFICDVFVLNSLMHVYCVFHRLRDAQELFDEI--- 172
+CS L L+++I V KL GF + FV +L+ ++ L A ++F+++
Sbjct: 276 SCSSLGDPCLSESI---VRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVY 332
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
YR V N +I Y + GDL AR LFD+MP RD VSW +++AGY Q+ + +AI+LF
Sbjct: 333 KYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFE 392
Query: 233 NMMDL-DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M+ D KPD + +VS SAC LGEL G ++ N I++ + L+ Y++C
Sbjct: 393 EMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRC 452
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G + A+ IF+ ++L ++N ++ G A HG G S+ +M E I+PD +T + L
Sbjct: 453 GSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAIL 512
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
CSHAGL+ E ++LF+ ++ ++ HY CM D+LGRAG +EEA+++I+ MPM
Sbjct: 513 TACSHAGLLGEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPH 567
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
++ LL IH VE+ E AA + K++P + G Y +L+++YA+A RW+D K+R +
Sbjct: 568 AGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDT 627
Query: 472 LDAGKIKKNAGCSLIQLN 489
+ +KK G S ++ N
Sbjct: 628 MRKQGVKKTTGLSWLEHN 645
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 205/464 (44%), Gaps = 91/464 (19%)
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNA-VVLFSQM-RTVSIPPDFYSFPFL 117
P SY IF+ +P + +++ ++ V LF M R +I P+ + +
Sbjct: 51 PSSYTCHIFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVM 110
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI----- 172
+++ S + + VLK G+ D +V N ++ +Y + + A++LFDE+
Sbjct: 111 MKSAG-----SESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTV 165
Query: 173 ------------------------------LYRDVVSCNTLIDGYVKAGDLAHARQLFDR 202
+ R+V++ T+I G+ K G+L AR FD+
Sbjct: 166 ADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDK 225
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPDNIALVSALSACARLGELEQ 261
MP R VSW +++GYAQ EE I+LF +M+ +++PD V+ +S+C+ LG+
Sbjct: 226 MPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCL 285
Query: 262 GKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAIEIFES----------------- 303
++I R ++ R + F+ T L+D +AKCG + A +IFE
Sbjct: 286 SESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMIS 345
Query: 304 -----------------SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGV 345
+++ +WN+M+ G +G ++ F MI + KPD V
Sbjct: 346 AYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEV 405
Query: 346 TILGALVGCSH---AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
T++ C H GL + A + E +S Y + + R G +++A+ +
Sbjct: 406 TMVSVFSACGHLGELGLGNWAVSILKENHIQISISV----YNSLISMYSRCGSMQDAVLI 461
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDG 446
++M D+ ++ L+ G HG+ + E ++K+K EDG
Sbjct: 462 FQEMAT-RDLVSYNTLISGFAEHGH---GMESIELLLKMK-EDG 500
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 234/426 (54%), Gaps = 3/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF-LLRACS 122
A +F IP S+ T+I + +A+ + QM D L++AC+
Sbjct: 229 AAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDHEVLLVDLMKACA 288
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + + Q +H+ +LK GF FV +L+H Y + AQ F S N
Sbjct: 289 RYSAITEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMAFKLSDKSHTASWNA 348
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+ ++ G + AR+LFD MP RD VSW T+++GY Q+ + + A++LF +M++ ++P+
Sbjct: 349 LLAALLRKGLIHEARELFDDMPERDTVSWSTMISGYVQTGRSDMALELFYSMLNTSVEPN 408
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ L SALSA A G L+QGK IH +I I++ LS GL+D YAK G + A++ F
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDHIMNRPIQLTDNLSAGLIDMYAKRGSVADAVQFFN 468
Query: 303 SSQEK--NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
+ +K ++ WNAM+ LA+HG +SL FS++ IKP+ +T +G L C H G+V
Sbjct: 469 CASDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHTGMV 528
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + F+ M YG+ +KHYGCM DLLGRAG +EEA +++ MPM DV +W +L
Sbjct: 529 AKGKYYFEAMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKADVVIWGSILS 588
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
R GN+ + E AAE + KL G L+++YA+A W +V +R+ L ++
Sbjct: 589 AARAQGNIALGEKAAEELAKLDQTHGASKVALSNIYADAGHWTNVSVVRKELQDENFERL 648
Query: 481 AGCSLI 486
G S I
Sbjct: 649 VGRSGI 654
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 179/402 (44%), Gaps = 38/402 (9%)
Query: 61 LSYALSIFNNIP--YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L A + + +P + SY T++ A AV +F M + ++ P+ + +
Sbjct: 92 LDRAQRLLDEMPRVHRDAVSYTTLVTALARAGHAGRAVAVFRGMLSENVVPNEVTLAGAI 151
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A ++ + + IH LK V V +L+H Y L A+ +FD + +R+ V
Sbjct: 152 MAFARCGAPATVGMIHGFALKRALDGFVIVATNLVHAYAGVLELYSARAMFDGMTHRNAV 211
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DL 237
+ N +++GYVKA + A ++F R+P RD VSW TL+ GY +D +A++ + M+ ++
Sbjct: 212 TWNAMLNGYVKAEMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEV 271
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC------ 291
+ LV + ACAR + +G+ +H I N +F+ LV FY C
Sbjct: 272 GANDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLA 331
Query: 292 -------------------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
G I+ A E+F+ E++ +W+ M+ G G
Sbjct: 332 QMAFKLSDKSHTASWNALLAALLRKGLIHEARELFDDMPERDTVSWSTMISGYVQTGRSD 391
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE-MESVYGVSKELKHYGC 385
++L F M+ ++P+ VT+ AL + +G +D+ + + D M ++ L
Sbjct: 392 MALELFYSMLNTSVEPNEVTLASALSAIADSGTLDQGKWIHDHIMNRPIQLTDNLS--AG 449
Query: 386 MADLLGRAGLIEEALEMIK-KMPMGGDVFVWSGLLGGCRIHG 426
+ D+ + G + +A++ V W+ ++ IHG
Sbjct: 450 LIDMYAKRGSVADAVQFFNCASDKFSSVSPWNAMICSLAIHG 491
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 10/269 (3%)
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVF-HRLRDAQELFDEI 172
PFL+ + + + +H+ K G + C+ FV NS++ Y L A +LFDE
Sbjct: 10 PFLVASLKRAARLRCGEQLHALAAKSGLLACNAFVRNSVLSFYSRLPSSLASALQLFDET 69
Query: 173 L--YRDVVSCNTLIDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAI 228
RD + N+++ +AG L A++L D MP RDAVS+ TLV A++ A+
Sbjct: 70 PAPLRDTAARNSVLAALTRAGHLDRAQRLLDEMPRVHRDAVSYTTLVTALARAGHAGRAV 129
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
+F M+ ++ P+ + L A+ A AR G IH + + ++T LV Y
Sbjct: 130 AVFRGMLSENVVPNEVTLAGAIMAFARCGAPATVGMIHGFALKRALDGFVIVATNLVHAY 189
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
A + +A +F+ +N TWNAML G + ++ F R+ E D V+ L
Sbjct: 190 AGVLELYSARAMFDGMTHRNAVTWNAMLNGYVKAEMIDMAAEVFWRIPE----RDEVSWL 245
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVS 377
+ G A L+ +A K + +M G +
Sbjct: 246 TLIDGYICADLISDAMKAYVQMVGEVGAN 274
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 233/429 (54%), Gaps = 31/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A IF + + S+N II A + ++ F++M + PD +++ +L+A
Sbjct: 444 LMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKA 503
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L S +H +V+K G D FV
Sbjct: 504 CAALRSLEYGLMVHDKVIKSGLGSDAFV-------------------------------A 532
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+T++D Y K G + A++L DR+ + VSW +++G++ + + EEA + F M+D+ +K
Sbjct: 533 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 592
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD+ + L CA L +E GK IH I ++ D ++S+ LVD YAKCG + ++ +
Sbjct: 593 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 652
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE ++++ +WNAM+ G A+HGLG +L F RM + + P+ T + L CSH GL
Sbjct: 653 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 712
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F M + Y + +L+H+ CM D+LGR+ +EA++ I MP D +W LL
Sbjct: 713 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C+I +VEIAE AA +V+ L P+D VY +L++VYA + +W DV + RR L G++KK
Sbjct: 773 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 832
Query: 481 AGCSLIQLN 489
GCS I++
Sbjct: 833 PGCSWIEVQ 841
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 174/404 (43%), Gaps = 50/404 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A+++F+ +P P S+N ++ + +V LF +M + PD +F LL++
Sbjct: 141 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 200
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L SL +H+ +K G EI DV +
Sbjct: 201 CSALEELSLGVQVHALAVKTGL----------------------------EI---DVRTG 229
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ L+D Y K L A F MP R+ VSWG +AG Q++Q ++LF M L +
Sbjct: 230 SALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLG 289
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ SA +CA + L G+ +H + N+ D + T +VD YAK + A
Sbjct: 290 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 349
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F + T NAM+VGL GLG ++ F MI + I+ D V++ G C+
Sbjct: 350 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAET--- 406
Query: 361 DEARKLFDEMESVY------GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
K + + + V+ G ++ + DL G+ + EA + + M D
Sbjct: 407 ----KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ-KDSVS 461
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMK--LKPED---GGVYKVLA 453
W+ ++ +G+ + +++ +KP+D G V K A
Sbjct: 462 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 505
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 167/369 (45%), Gaps = 33/369 (8%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
+ L+ A F +P + + N ++ + A+ LF M SI D S +
Sbjct: 340 ANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGV 399
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
AC++ + Q +H +K GF D+ V N+++ +Y
Sbjct: 400 FSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG-------------------- 439
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
C L++ Y+ +F M +D+VSW ++A Q+ ++ I F M+
Sbjct: 440 -KCKALMEAYL----------IFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 488
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+KPD+ S L ACA L LE G +H + + + D+F+++ +VD Y KCG I+ A
Sbjct: 489 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 548
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++ + + + +WNA+L G +++ + +FS M++ +KPD T L C++
Sbjct: 549 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 608
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
++ +++ ++ + E + D+ + G + ++L + +K+ D W+
Sbjct: 609 ATIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDSLLVFEKVEK-RDFVSWNA 666
Query: 418 LLGGCRIHG 426
++ G +HG
Sbjct: 667 MICGYALHG 675
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS--QVLKLGFICDVFVLNSLMHVYCV 158
Q + + P +F + ++C+Q +LA + +++ GF+ FV N L+ +Y
Sbjct: 47 QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYAR 106
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
A+ +FD + RD VS NT++ Y AGD++ A LFD MP D VSW LV+GY
Sbjct: 107 CAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGY 166
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
Q +E++ LF M + PD L +C+ L EL G +H + +D
Sbjct: 167 CQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDV 226
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
+ LVD Y KC ++ A+ F E+N +W A + G + L F M
Sbjct: 227 RTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRL 286
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKL 366
+ + A C+ ++ R+L
Sbjct: 287 GLGVSQPSYASAFRSCAAMSCLNTGRQL 314
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 36/400 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L AL F +P + S+ I + + LF +M+ + + S+ R+
Sbjct: 242 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRS 301
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + + +H+ +K F D V +++ VY + L DA+ F + V +
Sbjct: 302 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 361
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N ++ G V+AG G EA+ LF M+ I+
Sbjct: 362 NAMMVGLVRAG-------------------LGI------------EAMGLFQFMIRSSIR 390
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D ++L SACA QG+ +H + VD ++ ++D Y KC + A I
Sbjct: 391 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 450
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++K+ +WNA++ L +G ++++F+ M+ +KPD T L C+ +
Sbjct: 451 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 510
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + D++ G+ + + D+ + G+I+EA ++ ++ G V W+ +L
Sbjct: 511 EYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVVSWNAILS 568
Query: 421 GCRIHGNVEIAEAAAEHV--MKLKPEDGGVYKVLADVYAN 458
G ++ E A+ + M LKP D + + D AN
Sbjct: 569 GFSLNKESEEAQKFFSEMLDMGLKP-DHFTFATVLDTCAN 607
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/433 (33%), Positives = 238/433 (54%), Gaps = 32/433 (7%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
+D L A +F+ +P +T S+ T+I+ + L A+ LF ++ +P F +F +
Sbjct: 86 SDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQF-TFASV 144
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+AC+ + +L IH V+K+G DVFV N+LM
Sbjct: 145 LQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALM------------------------ 180
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
D Y K G + ++ +LF P R+ V+W T++ G+ Q E+A++LF NM++
Sbjct: 181 -------DVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEY 233
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
++ + SAL ACA L LE G IH D ++ L+D YAKCG I A
Sbjct: 234 RVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA 293
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+ +++ +WNAM+ G +MHGLGR +L F +M E +KPD +T +G L C++A
Sbjct: 294 RLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANA 353
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GL+D+ + F M +G+ ++HY CM LLGR G +++A+++I ++P V VW
Sbjct: 354 GLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRA 413
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LLG C IH ++E+ +A+ V++++P+D + +L+++YA A RW++V +R+++ +
Sbjct: 414 LLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGV 473
Query: 478 KKNAGCSLIQLNG 490
KK G S I+ G
Sbjct: 474 KKEPGLSWIESQG 486
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 7/260 (2%)
Query: 171 EILYR----DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEE 226
EIL R D+ + N L++ YVK+ L A +LFD MP R+ +S+ TL+ GYA+S + E
Sbjct: 63 EILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
AI+LF + ++ P+ S L ACA + L G IH ++ + D F+S L+D
Sbjct: 123 AIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 181
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAKCG + ++E+F S +N TWN ++VG G G +L F M+E R++ VT
Sbjct: 182 VYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
AL C+ ++ ++ + K++ + D+ + G I++A ++ +
Sbjct: 242 YSSALRACASLAALEPGLQIHS-LTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDL 299
Query: 407 PMGGDVFVWSGLLGGCRIHG 426
D W+ ++ G +HG
Sbjct: 300 MNKQDEVSWNAMISGYSMHG 319
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 222/422 (52%), Gaps = 31/422 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN + S+ +I A+ +F M+ + P+ ++ +L ACS +
Sbjct: 503 LFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAA 562
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IH QV++ G D V NTL++
Sbjct: 563 LDWGRRIHQQVIEAGLATDAHV-------------------------------ANTLVNM 591
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y G + ARQ+FDRM RD V++ ++ GYA + +EA++LF + + +KPD +
Sbjct: 592 YSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTY 651
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
++ L+ACA G LE K IH + + D+ L LV YAKCG + A+ +F+ +
Sbjct: 652 INMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMK 711
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+N+ +WNA++ G A HG G+ L F RM IKPD VT + L CSHAGL++E R+
Sbjct: 712 RNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRY 771
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M +G++ ++HYGCM DLLGRAG ++E +IK MP + +W LLG CRIHG
Sbjct: 772 FCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHG 831
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NV +AE AAE +KL P++ VY L+ +YA A W+ K+R+ ++ + K G S I
Sbjct: 832 NVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWI 891
Query: 487 QL 488
++
Sbjct: 892 EV 893
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 176/361 (48%), Gaps = 35/361 (9%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F + ++NT+I + A ++ QM+ + P+ ++ LL AC +
Sbjct: 402 VFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTA 461
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IHS+V+K GF+ D+ V N+L I
Sbjct: 462 LHWGREIHSRVVKDGFMFDISVQNAL-------------------------------ISM 490
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y + G + AR LF++M +D +SW ++ G A+S EA+ +F +M +KP+ +
Sbjct: 491 YARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTY 550
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S L+AC+ L+ G+ IH+ + + D+ ++ LV+ Y+ CG + A ++F+ +
Sbjct: 551 TSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ 610
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+++ +NAM+ G A H LG+ +L F R+ E +KPD VT + L C+++G ++ A+++
Sbjct: 611 RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEI 670
Query: 367 FD-EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
++ Y L + + + G +AL + KM M +V W+ ++GGC H
Sbjct: 671 HSLVLKDGYLSDTSLGN--ALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQH 727
Query: 426 G 426
G
Sbjct: 728 G 728
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 160/362 (44%), Gaps = 33/362 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + S S+ II + A +F +M+ + P+ ++ +L A S
Sbjct: 298 AREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSG 357
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ +T+HS +L G D+ V +L+ +Y
Sbjct: 358 PAALKWGKTVHSHILNAGHESDLAVGTALVKMY--------------------------- 390
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
K G RQ+F+++ RD ++W T++ G A+ EEA +++ M + P+
Sbjct: 391 ----AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNK 446
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I V L+AC L G+ IH + + D + L+ YA+CG I A +F
Sbjct: 447 ITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNK 506
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K++ +W AM+ GLA GLG +L F M +A +KP+ VT L CS +D
Sbjct: 507 MVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWG 566
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R++ ++ G++ + + ++ G +++A ++ +M D+ ++ ++GG
Sbjct: 567 RRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ-RDIVAYNAMIGGYA 624
Query: 424 IH 425
H
Sbjct: 625 AH 626
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 47/324 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + +YN +I + + A+ LF +++ + PD ++ +L AC+
Sbjct: 601 ARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACAN 660
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
S A+ IHS VLK G++ D + N+L+ Y DA +FD+++ R+V+S N +
Sbjct: 661 SGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAI 720
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G + G QLF+RM E I KPD
Sbjct: 721 IGGCAQHGRGQDVLQLFERMKM--------------------EGI-----------KPDI 749
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
+ VS LSAC+ G LE+G+ + + + G +VD + G ++ + +
Sbjct: 750 VTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIK 809
Query: 303 SSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK--PDGVTILGALVGCSH--- 356
+ + N W A+L +HG ++ R E+ +K PD + AL SH
Sbjct: 810 TMPFQANTRIWGALLGACRIHG----NVPVAERAAESSLKLDPDNAAVYVAL---SHMYA 862
Query: 357 -AGLVDEARKLFDEMESVYGVSKE 379
AG+ D A KL ME GV+KE
Sbjct: 863 AAGMWDSAAKLRKLMEQ-RGVTKE 885
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 123/258 (47%), Gaps = 4/258 (1%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
D + N LI+ Y++ G + ARQ+++++ R SW +V GY Q EEA++L
Sbjct: 175 DQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLRE 234
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M + + LS+C LE G+ IH ++ D ++ +++ YAKCG
Sbjct: 235 MQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGS 294
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
I+ A E+F+ + K++ +W ++ G A G ++ F +M + + P+ +T + L
Sbjct: 295 IHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
S + + + + + G +L + + + G ++ ++ +K+ + D+
Sbjct: 355 FSGPAALKWGKTVHSHILNA-GHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLI 412
Query: 414 VWSGLLGGCRIHGNVEIA 431
W+ ++GG GN E A
Sbjct: 413 AWNTMIGGLAEGGNWEEA 430
>gi|449435190|ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 609
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 231/417 (55%), Gaps = 37/417 (8%)
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+PS+F +N IIR++T P A+ ++ M I PD Y+ P + +A S + L
Sbjct: 221 HPSSFYWNIIIRSYTRLEVPRIALFVYIDMLRAGILPDCYTLPIVFKALSLAYAFDLGLQ 280
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+HS ++LGF D + S + LI Y K GD
Sbjct: 281 LHSVAIRLGFEFDQY-------------------------------SESGLISLYSKIGD 309
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
L A ++F++ R SW ++AG +Q + +EA+ +F + ++PD+ +VS SA
Sbjct: 310 LECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSVTSA 369
Query: 253 CARLGELEQGKNIHRYIELNQIRV----DSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
C LG LE +H+++ Q++V + + L+D Y KCG ++ A+++F + +N
Sbjct: 370 CGSLGNLELSLQMHKFVF--QVKVTGKSNILMLNSLIDMYGKCGRMDLAMKVFSNMGHRN 427
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ +W +++VG AMHG + +L F M EA + P+ VT +G L C H G+++E + FD
Sbjct: 428 VSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHYFD 487
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M++VYG +L HYGCM DLL +AGL+EEA MI++MPM + +W L+GGC HGNV
Sbjct: 488 MMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNV 547
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
EI E A +H+ +L+P + GVY VL+++YA W++ K+R + ++ K G SL
Sbjct: 548 EIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYSL 604
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 252/479 (52%), Gaps = 47/479 (9%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
K I+ Q+HA G+ F LY I + L+ A +F+
Sbjct: 15 KAIEPGKQLHARICQVGISFNPLLATKLVNLYCIC-------------NSLTNAHLLFDR 61
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
I + F +N +IR + A+ L+ QMR + PD ++FPF+L+ACS L +
Sbjct: 62 ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ IH V++ G DVFV +L ID Y K
Sbjct: 122 KKIHKDVIRSGLESDVFVGAAL-------------------------------IDMYAKC 150
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSA 249
G + ARQ+FD++ RD V W +++A Y+Q+ Q +E++ L C +M + +KP V +
Sbjct: 151 GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLAL-CRVMAFNGLKPTEGTFVIS 209
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
++A A G L QGK +H Y + + + T L+D YAK G +N A +FE +EK +
Sbjct: 210 IAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRV 269
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+WNAM+ G AMHG +L F M + ++ PD +T +G L CSH GL++E + F
Sbjct: 270 VSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRS 328
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M S + + ++HY CM DLLG G +EEA ++I +M + D VW LL C+IHGNVE
Sbjct: 329 MISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVE 388
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ E A E +++L+P+DGG Y +L+++YA A +W+ V ++R + +KK+ CS I++
Sbjct: 389 MGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEV 447
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L +C +E GK +H I I + L+T LV+ Y C + A +F+ ++
Sbjct: 6 SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
NLF WN M+ G A +G L++ + +M + + PD T L CS ++E +K+
Sbjct: 66 NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
++ G+ ++ + D+ + G +E A ++ K+ DV W+ +L +G
Sbjct: 126 KDVIRS-GLESDVFVGAALIDMYAKCGCVESARQVFDKIDE-RDVVCWNSMLATYSQNGQ 183
Query: 428 VEIAEAAAEHVMK---LKPEDG 446
+ + A VM LKP +G
Sbjct: 184 PDESLALCR-VMAFNGLKPTEG 204
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 224/385 (58%), Gaps = 5/385 (1%)
Query: 105 VSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRD 164
+ I PD F LL AC A H+++++ G+ + + SL+ Y ++L
Sbjct: 5 LKILPDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNL 64
Query: 165 AQELFDEILYRDV--VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
A ++ ++ V N +ID +++ G+ A+++F +MP RD V+W +++ GY ++
Sbjct: 65 AYQVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNG 124
Query: 223 QCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST 282
+ EEA++ F M+ +++PD S ++ACARLG L + +H + +I V+ LS+
Sbjct: 125 KFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSS 184
Query: 283 GLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKP 342
L+D Y+KCG I TA E+FES + ++ WN+++ GLA+HGL +++ FS+M + P
Sbjct: 185 ALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLP 244
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEM 402
D +T LG L CSH GLV E RK FD ME+ Y + +L+HYG M DLLGRAGL++EA M
Sbjct: 245 DSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAM 304
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRW 462
I MPM DV VW LL CR H N E+ E A ++ K D Y +L+++Y + +RW
Sbjct: 305 ITAMPMEPDVIVWRILLSACRTHRNTELGEVAVANISGPKSGD---YVLLSNIYCSQNRW 361
Query: 463 EDVVKIRRSLDAGKIKKNAGCSLIQ 487
++ ++R + ++K G S +
Sbjct: 362 DNAQEVREMMKEEGVRKRRGKSWFE 386
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P ++N++I + A+ F M + ++ PD ++F ++ AC++
Sbjct: 98 AKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACAR 157
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + AQ +H +++ + + ++L+ +Y R+ A+E+F+ + DV N+L
Sbjct: 158 LGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSL 217
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+G V G A +A+ +F M ++ PD+
Sbjct: 218 INGLA--------------------------VHGLAL-----DAMMVFSKMEAENVLPDS 246
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAIEIF 301
+ + L AC+ G +++G+ +E N + L +VD + G ++ A +
Sbjct: 247 LTFLGILKACSHCGLVKEGRKYFDLME-NYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMI 305
Query: 302 ES-SQEKNLFTWNAMLVGLAMH 322
+ E ++ W +L H
Sbjct: 306 TAMPMEPDVIVWRILLSACRTH 327
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 228/423 (53%), Gaps = 31/423 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F +P ++N +I H+ A LF M T I + + +L++ + L +
Sbjct: 269 VFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQA 328
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ + + IH+ LK GF D +V+NSL ID
Sbjct: 329 NYMCRQIHALSLKSGFEFDNYVVNSL-------------------------------IDT 357
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G + A ++F+ P D V + +LV YAQ Q EEA++L+ M D IKPD+
Sbjct: 358 YGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVC 417
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S L+ACA L EQGK +H +I D F LV+ YAKCG I A F
Sbjct: 418 SSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+ + +W+AM+ GLA HG G+ +L F +M++ + P+ +T++ L C+HAGLV EA+
Sbjct: 478 RGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHY 537
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F+ M+ ++G+ +HY CM DLLGRAG +E A+E++ KMP + VW LLG RIH
Sbjct: 538 FNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHK 597
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N+++ E AAE ++ L+PE G + +LA++YA+ W+ V ++RR + GK+KK G S +
Sbjct: 598 NIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWL 657
Query: 487 QLN 489
++
Sbjct: 658 EVK 660
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 152/334 (45%), Gaps = 36/334 (10%)
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR 161
M + I + ++FP +L+AC+ L + +H V+ GF D FV NSL+
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLV-------- 52
Query: 162 LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS 221
ILY K G AR LFD +P R VSW L + Y S
Sbjct: 53 ----------ILY-------------AKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHS 89
Query: 222 DQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
D EA+ LF +M+ I+P+ +L S ++ C L + QG+ IH Y+ D+F +
Sbjct: 90 DMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSA 149
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK 341
LVD YAK G + A +F+ + ++ +WNA++ G +H +L M ++ +
Sbjct: 150 NALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMC 209
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
P+ T+ AL C+ L + R+L + + S G + D+ + +++A
Sbjct: 210 PNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG-LIDMYSKCNSMDDARL 268
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
+ K MP D+ W+ ++ G H E E AA
Sbjct: 269 VFKLMPE-RDMIAWNAVISG---HSQNEEDEEAA 298
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 162/366 (44%), Gaps = 33/366 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A S+F+ I P S+N II L A+ L +M + P+ ++ L+A
Sbjct: 162 LEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKA 221
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + L + +HS ++K+ D F+ L+ +Y C
Sbjct: 222 CAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYS---------------------KC 260
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N++ D AR +F MP RD ++W +++G++Q+++ EEA LF M I
Sbjct: 261 NSMDD----------ARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIG 310
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ L + L + A L + IH + D+++ L+D Y KCG++ A +
Sbjct: 311 FNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRV 370
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE S +L + +++ A G G +L + M + IKPD L C+
Sbjct: 371 FEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAY 430
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++ +++ + +G ++ + ++ + G IE+A ++P+ G + WS ++G
Sbjct: 431 EQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG-IVSWSAMIG 488
Query: 421 GCRIHG 426
G HG
Sbjct: 489 GLAQHG 494
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 179/440 (40%), Gaps = 75/440 (17%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A S+F+ IP S S+N + + AV LF M I P+ +S ++ C+
Sbjct: 64 ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + IH ++KLG+ D F N+L+ +Y L DA +FDEI D+V
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV----- 178
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
SW ++AG + A++L M + P+
Sbjct: 179 --------------------------SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNM 212
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
L SAL ACA + E G+ +H + + DSFL GL+D Y+KC ++ A +F+
Sbjct: 213 FTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKL 272
Query: 304 SQEKNLFTWNAMLVGLA--------------MH--GLG----RLSLV----------YFS 333
E+++ WNA++ G + MH G+G LS V Y
Sbjct: 273 MPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMC 332
Query: 334 RMIEARIKPDGVT----ILGALVGC-SHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
R I A G ++ +L+ G V++A ++F+E V +L + +
Sbjct: 333 RQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIV-----DLVLFTSLVT 387
Query: 389 LLGRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK-PE 444
+ G EEAL + +M G D FV S LL C E + H++K
Sbjct: 388 AYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMS 447
Query: 445 DGGVYKVLADVYANADRWED 464
D L ++YA ED
Sbjct: 448 DIFAGNSLVNMYAKCGSIED 467
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 33/261 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F P + +++ A+ A+ L+ +M+ I PD + LL AC+
Sbjct: 367 ATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACAS 426
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L ++ + +H +LK GF+ D+F NSL+++
Sbjct: 427 LSAYEQGKQVHVHILKFGFMSDIFAGNSLVNM---------------------------- 458
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
Y K G + A F R+P R VSW ++ G AQ +EA+QLF M+ + + P++
Sbjct: 459 ---YAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNH 515
Query: 244 IALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
I LVS L AC G + + K+ ++ L I ++D + G + A+E+
Sbjct: 516 ITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVN 575
Query: 303 SSQ-EKNLFTWNAMLVGLAMH 322
+ N W A+L +H
Sbjct: 576 KMPFQANALVWGALLGAARIH 596
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 223/381 (58%), Gaps = 27/381 (7%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
P+ +++PF+L+AC+ + + +L +++H V+K GF +V V N+L+H+YC R +
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCC---CRGGE-- 62
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
G + AR++FD M D+VSW ++ GY + + +AI
Sbjct: 63 ----------------------GGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAI 100
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
LF M + PD I +VS LSAC LG LE GK + Y+E +++ + LS L+D +
Sbjct: 101 NLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMF 160
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
AKCG ++ A +F S +E+N+ +W +++ GLAMHG G ++ F M+ + + PD V +
Sbjct: 161 AKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFI 220
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L CSH+GLVD+ ++ FD M + + +++HYGCM D+L RAGL++EAL+ +++MP+
Sbjct: 221 GLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPI 280
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
+ VW L+ CR HG +++ E +++ +P Y +L+++YA WE +I
Sbjct: 281 DPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRI 340
Query: 469 RRSLDAGKIKKNAGCSLIQLN 489
R ++D +KK G ++I+L+
Sbjct: 341 REAMDMKGMKKIPGSTMIELD 361
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 33/265 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ +A +F+ + + S++ +I + +A+ LF +M+ + PD + +L A
Sbjct: 65 IEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSA 124
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + L + + S V K E + ++V
Sbjct: 125 CTGLGALELGKWVESYVEK-------------------------------ERVQKNVELS 153
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LID + K GD+ A LF M R+ VSW +++ G A + EA+ +F M+ +
Sbjct: 154 NALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVT 213
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD++ + LSAC+ G +++GK + + V G +VD + G + A++
Sbjct: 214 PDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALK 273
Query: 300 -IFESSQEKNLFTWNAMLVGLAMHG 323
+ E + N W ++ HG
Sbjct: 274 FVQEMPIDPNPVVWRTLINACRAHG 298
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 8/218 (3%)
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC-- 291
M++ P+ L ACA +G L GK++H + + + LV Y C
Sbjct: 1 MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 292 --GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
G I A ++F+ + + +W+AM+ G G ++ F M + PD +T++
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L C+ G ++ + + +E V K ++ + D+ + G +++A + + M
Sbjct: 121 VLSACTGLGALELGKWVESYVEKER-VQKNVELSNALIDMFAKCGDVDKATNLFRSM-RE 178
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPED 445
++ W+ ++GG +HG A A E +++ + P+D
Sbjct: 179 RNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDD 216
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 225/415 (54%), Gaps = 31/415 (7%)
Query: 76 TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHS 135
T YN ++ + S +AV+LF QM +P + + L+ AC + L ++H
Sbjct: 108 TVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHC 167
Query: 136 QVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAH 195
LK GF DV V+N I Y+K G + +
Sbjct: 168 STLKYGFDSDVSVVN-------------------------------CFITMYMKCGSVNY 196
Query: 196 ARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACAR 255
A++LFD MP + +SW +V+GYAQ+ ++L+ NM + PD + LV LS+CA
Sbjct: 197 AQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCAN 256
Query: 256 LGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
LG G + ++ + + FL+ L++ YA+CG + A +F+ E+ L +W A+
Sbjct: 257 LGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAI 316
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYG 375
+ G MHG G +++ F MI + I+PDG + L CSHAGL D+ + F M+ Y
Sbjct: 317 IGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQ 376
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAA 435
+ +HY CM DLLGRAG ++EA +I+ MP+ D VW LLG C+IH NVE+AE A
Sbjct: 377 LEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAF 436
Query: 436 EHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
E V++L+PE+ G Y +L+++Y+NA+ + V++IR + K+KK+ GCS ++L G
Sbjct: 437 ERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKG 491
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 31/353 (8%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+NT +R L A+ L+ QM P+ ++FPF L++C+ L L H Q+
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
K+G + + FV L+ +YC + +A+++F+E H+R+
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENF---------------------HSRK 106
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
L V + LV+GY + +C +A+ LF M + + +++ L+ + AC
Sbjct: 107 L--------TVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPIN 158
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
LE G ++H D + + Y KCG +N A ++F+ K L +WNAM+ G
Sbjct: 159 LELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSG 218
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
A +GL L + M + PD VT++G L C++ G ++ +M++ S
Sbjct: 219 YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSN 278
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + ++ R G + +A + MP + W+ ++GG +HG+ EIA
Sbjct: 279 PFLN-NALINMYARCGNLTKAQAVFDGMPE-RTLVSWTAIIGGYGMHGHGEIA 329
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 35/287 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA +F+ +P S+N ++ + N + L+ M + PD + +L +
Sbjct: 194 VNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSS 253
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + S+ + ++ GF + F+ N+L+++Y L AQ +FD + R +VS
Sbjct: 254 CANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 313
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+I GY G H E A+QLF M+ I+
Sbjct: 314 TAIIGGY---GMHGHG----------------------------EIAVQLFKEMIRSGIE 342
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELN-QIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD A V LSAC+ G +QG + ++ N Q+ + +VD + G + A
Sbjct: 343 PDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQT 402
Query: 300 IFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
+ ES K + W A+L +H L+ + F R+IE ++P+ +
Sbjct: 403 LIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENI 447
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 245/432 (56%), Gaps = 34/432 (7%)
Query: 61 LSYALSIFNNIPYP--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L A ++F +P P + S+ I+ A+ P+ A+ +FSQMR + + PD+ + +L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A + L ++IH+ V+K+G EI ++
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGL----------------------------EIEPDLLI 261
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S NT+ Y K G +A A+ LFD+M + + W +++GYA++ EAI +F M++ D
Sbjct: 262 SLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD I++ SA+SACA++G LEQ ++++ Y+ + R D F+S+ L+D +AKCG + A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ + ++++ W+AM+VG +HG R ++ + M + P+ VT LG L+ C+H+G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V E F+ M + ++ + +HY C+ DLLGRAG +++A E+IK MP+ V VW L
Sbjct: 439 MVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+ H +VE+ E AA+ + + P + G Y L+++YA A W+ V ++R + +
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 479 KNAGCSLIQLNG 490
K+ GCS +++ G
Sbjct: 558 KDVGCSWVEVRG 569
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 218/420 (51%), Gaps = 50/420 (11%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
Q+ QIHA L GL F ++T +++A ++F I+ +A +F+++P P
Sbjct: 36 QLKQIHARLLVLGLQFSG--FLITKLIHASSSFGDIT-----------FARQVFDDLPRP 82
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
F +N IIR ++ + +A++++S M+ + PD ++FP LL+ACS L + + +H
Sbjct: 83 QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+QV +LGF DVFV N L+ +Y R L
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRR-------------------------------LG 171
Query: 195 HARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
AR +F+ +P R VSW +V+ YAQ+ + EA+++F M +D+KPD +ALVS L+A
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
L +L+QG++IH + + ++ L L YAKCG + TA +F+ + NL W
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM-E 371
NAM+ G A +G R ++ F MI ++PD ++I A+ C+ G +++AR +++ +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S Y ++ + D+ + G +E A ++ + DV VWS ++ G +HG A
Sbjct: 352 SDY--RDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 239/430 (55%), Gaps = 31/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ IP + S+ II + A+ LF + + + PD ++ +L A
Sbjct: 153 LTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYA 212
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS++ + + I + + G + +VFV SL
Sbjct: 213 CSRVGDLASGRWIDGYMRESGSVGNVFVATSL---------------------------- 244
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+D Y K G + AR++FD M +D V W L+ GYA + +EA+ +F M +++
Sbjct: 245 ---VDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVR 301
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD A+V SAC+RLG LE G ++ ++ + L T L+DFYAKCG + A E+
Sbjct: 302 PDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEV 361
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ + K+ +NA++ GLAM G + F +M++ ++PDG T +G L GC+HAGLV
Sbjct: 362 FKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLV 421
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F M SV+ V+ ++HYGCM DL RAGL+ EA ++I+ MPM + VW LLG
Sbjct: 422 DDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLG 481
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GCR+H + ++AE + +++L+P + G Y +L+++Y+ + RW++ KIR SL+ ++K
Sbjct: 482 GCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKL 541
Query: 481 AGCSLIQLNG 490
GCS ++++G
Sbjct: 542 PGCSWVEVDG 551
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 217/454 (47%), Gaps = 66/454 (14%)
Query: 7 IKRC-----KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
+K+C K++ Q Q H C +L L+ T + SS
Sbjct: 5 LKKCFAWGLKSLHQAKQCH-------------CLLLRLGLHQDTYLINLLLRSSLHFAAT 51
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA +F P+P+ F YNT+IR + +AV +++ MR PD ++FPF+L+AC
Sbjct: 52 QYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKAC 111
Query: 122 SQLCSH-SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++L + + ++HS V+K GF DVFV L+ C+
Sbjct: 112 TRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLV---CL---------------------- 146
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
Y K G L AR++FD +P ++ VSW ++ GY +S EA+ LF ++++ ++
Sbjct: 147 ------YSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 200
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD+ LV L AC+R+G+L G+ I Y+ + + F++T LVD YAKCG + A +
Sbjct: 201 PDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRV 260
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG-- 358
F+ EK++ W+A++ G A +G+ + +L F M ++PD ++G CS G
Sbjct: 261 FDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGAL 320
Query: 359 -LVDEARKLFDEME----SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
L + AR L D E V G + + D + G + +A E+ K M D
Sbjct: 321 ELGNWARGLMDGDEFLSNPVLGTA--------LIDFYAKCGSVAQAKEVFKGMRR-KDCV 371
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGG 447
V++ ++ G + G+V A ++K+ + G
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDG 405
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 233/425 (54%), Gaps = 33/425 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F + + S+N +I L AV L QM+ P+ +F +L AC++
Sbjct: 197 ASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACAR 256
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + IH++ + +G D+FV N L
Sbjct: 257 MGLVRPGKEIHARSIHMGCAFDLFV-------------------------------SNAL 285
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
D Y K+G L AR +FD RD VS+ L+ G++Q+ C E++ LF M + +K DN
Sbjct: 286 TDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDN 344
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
++ + ALSACA L ++QGK IH ++ + F++ L+DFY KCG I A IF+
Sbjct: 345 VSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDR 404
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K++ +WN M++G M G ++ F M + ++ D V+ + L CSH GL+++
Sbjct: 405 MTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKG 464
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
RK FDE+++ G+ HY CM DLLGRAGL+EEA E+IK +P+ D +W LLG CR
Sbjct: 465 RKYFDELKA-RGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACR 523
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
I+GN+E+A AAEH+ +LKPE G Y +L+++YA RW++ +IR + + +KK+ GC
Sbjct: 524 IYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGC 583
Query: 484 SLIQL 488
S +Q+
Sbjct: 584 SWVQI 588
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 41/316 (12%)
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
+ F +NT+IR +++ + + +++QM + + PD ++FPF+L+AC+ + +H
Sbjct: 6 TAFLWNTLIRGYSI-AGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVH 64
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
V+KLGF DVFV N+L+ Y LRDA +FDE+ +D+VS NT+I + G
Sbjct: 65 GSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNG--- 121
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
+RD A+ +F M+D +KP++I + S L
Sbjct: 122 --------WHYRD-------------------ALDMFRLMIDEGLKPNSITISSFLPVLV 154
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
L + G+ +H + D F++ L+D YAK G+ A +F KN+ +WNA
Sbjct: 155 ELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNA 214
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
M+ A + +++ +M + P+ VT L C+ GLV +++ S+
Sbjct: 215 MIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEI--HARSI- 271
Query: 375 GVSKELKHYGCMADLL 390
H GC DL
Sbjct: 272 -------HMGCAFDLF 280
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 238/431 (55%), Gaps = 3/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + +P + S+ T+I H + AV L+SQM P+ F +L A
Sbjct: 329 LDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSA 388
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L IH++ LK+G +VFV SL+ +YC ++ DAQ +FD + +++V
Sbjct: 389 CASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCW 448
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+L+ GY G + A LF +MP R+ SW T+++GYAQ+ Q +A++ F M+
Sbjct: 449 NSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQV 508
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P I S L ACA L L GK H + I+L I F+ T L D YAK G + ++
Sbjct: 509 PGEITFSSVLLACANLCSLVTGKMAHAKTIKLG-IEESIFIGTALSDMYAKSGDLQSSKR 567
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F E+N TW AM+ GLA +G S++ F M+ + P+ T L L CSH GL
Sbjct: 568 MFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGL 627
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V++A FD+M+++ G+S + KHY CM D+L RAG + EA ++ K P + W+ LL
Sbjct: 628 VEQAIHYFDKMQAL-GISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANSWAALL 686
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C + N EIAE AA+ + +L ++ Y +L+++YA+ RW+D +IR + +KK
Sbjct: 687 SACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKK 746
Query: 480 NAGCSLIQLNG 490
+ GCS +Q+ G
Sbjct: 747 DGGCSWVQVRG 757
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 187/403 (46%), Gaps = 38/403 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++ A+ ++ P S + I NA+ +F +M + + P+ + +++A
Sbjct: 196 VAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKA 255
Query: 121 CSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C LA +I +K F + V NSL+ +Y A+++FDE+ +DVVS
Sbjct: 256 CVGAGEFGLALSIVGLAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVS 315
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
L+D Y ++GDL AR++ D MP R+ VSWGTL+A + Q EA++L+ M+
Sbjct: 316 WTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGC 375
Query: 240 KPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+P+ S LSACA L +L G IH R +++ + F+S L+D Y KC A
Sbjct: 376 RPNISCFSSVLSACASLEDLRGGARIHARSLKMGS-STNVFVSCSLIDMYCKCNKCGDAQ 434
Query: 299 EIFESSQEKNLFTWNAMLVGL--------AMHGLGRL----------------------- 327
IF++ +KN+ WN+++ G AM+ ++
Sbjct: 435 TIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVD 494
Query: 328 SLVYFSRMIEARIKPDGVTILGALVGCSH-AGLVDEARKLFDEMESVYGVSKELKHYGCM 386
+L F+ M+ + P +T L+ C++ LV K+ G+ + + +
Sbjct: 495 ALKSFNAMLASGQVPGEITFSSVLLACANLCSLV--TGKMAHAKTIKLGIEESIFIGTAL 552
Query: 387 ADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+D+ ++G ++ + M +MP DV W+ ++ G +G E
Sbjct: 553 SDMYAKSGDLQSSKRMFYQMPERNDV-TWTAMIQGLAENGFAE 594
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 49/332 (14%)
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRL--RD---------------------- 164
LA ++H+ ++ G D V + L+ Y F R RD
Sbjct: 98 LALSLHAHAVRSGVAADRSVASHLLTTYAAFARAAERDRAFGDCVAADAASPFAYDFMVS 157
Query: 165 ----------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
A+ LFD + R VVS T++D +K G +A A +L+++ P +
Sbjct: 158 EHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTAT 217
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI-HRYIELNQ 273
++G+ +++ A+ +F M+ ++P+ I +V + AC GE +I I+ N
Sbjct: 218 ISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIKSNF 277
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
+ L+ Y + G A ++F+ K++ +W A+L + G L
Sbjct: 278 FESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESG----DLDGAR 333
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM------ESVYGVSKELKHYGCMA 387
R+++A + + V+ + G EA KL+ +M ++ S L +
Sbjct: 334 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLE 393
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
DL G A + +L KM +VFV L+
Sbjct: 394 DLRGGARIHARSL----KMGSSTNVFVSCSLI 421
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 239/432 (55%), Gaps = 36/432 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F + + S+ +II A+ +A+ LF +M++ + PD Y+ ++ A
Sbjct: 347 LNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 406
Query: 121 CSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
C+ CS SL + +HS V+K G ++ V N+L
Sbjct: 407 CA--CSSSLDKGRDVHSYVIKNGMGSNLPVTNAL-------------------------- 438
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
I+ Y K G + AR +F ++P +D VSW T++ GY+Q+ EA++LF +M
Sbjct: 439 -----INMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-Q 492
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
KPD+I + L ACA L L++G+ IH +I D ++ LVD YAKCG + A
Sbjct: 493 FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQ 552
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ +K+L +W M+ G MHG G ++ F+ M A I+PD + L CSH+G
Sbjct: 553 LLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSG 612
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L++E K F+ M + GV +L+HY C+ DLL R G + +A + I+ MP+ D +W L
Sbjct: 613 LLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVL 672
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L GCRIH +V++AE AEH+ +L+P++ Y VLA+VYA A++WE+V K+R+ + K
Sbjct: 673 LSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFK 732
Query: 479 KNAGCSLIQLNG 490
+N GCS I++ G
Sbjct: 733 QNPGCSWIEVGG 744
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 203/443 (45%), Gaps = 51/443 (11%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+K+ ++H + L G F S ++ +++ A F + SA + +F+ +
Sbjct: 211 VKECKRVHGYVLKLG--FGSNTAVVNSLIAAYFKFGGVESAHN-----------LFDELS 257
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P S+N++I + N + +F QM + + D + +L AC+ + + SL +
Sbjct: 258 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRA 317
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H GF + F E +VV NTL+D Y K G+
Sbjct: 318 LH------GF---------------------GVKACFSE----EVVFSNTLLDMYSKCGN 346
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
L A ++F +M VSW +++A Y + +AI LF M ++PD + S + A
Sbjct: 347 LNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 406
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA L++G+++H Y+ N + + ++ L++ YAKCG + A +F K++ +W
Sbjct: 407 CACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSW 466
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
N M+ G + + L +L F M + + KPD +T+ L C+ +D+ R++ +
Sbjct: 467 NTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILR 525
Query: 373 VYGVSKELKHYGC-MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH--GNVE 429
G +L H C + D+ + GL+ A + +P D+ W+ ++ G +H GN
Sbjct: 526 -RGYFSDL-HVACALVDMYAKCGLLVLAQLLFDMIPK-KDLISWTVMIAGYGMHGFGNEA 582
Query: 430 IAEAAAEHVMKLKPEDGGVYKVL 452
I+ + ++P++ +L
Sbjct: 583 ISTFNEMRIAGIEPDESSFSAIL 605
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 165/355 (46%), Gaps = 33/355 (9%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF+ I F +N ++ + + +V LF +M+ + + + Y+F +L+ + L
Sbjct: 151 IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 210
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H VLKLGF + V+NSL+ Y F + A LFDE+ DVVS N++I+G
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 270
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
V V G++ + +++F M+ L ++ D L
Sbjct: 271 CV--------------------------VNGFSGN-----GLEIFIQMLILGVEVDLTTL 299
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS L ACA +G L G+ +H + + S L+D Y+KCG +N A E+F +
Sbjct: 300 VSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 359
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+ +W +++ GL ++ F M ++PD T+ + C+ + +D+ R +
Sbjct: 360 TTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 419
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ G+ L + ++ + G +EEA + K+P+ D+ W+ ++GG
Sbjct: 420 HSYVIK-NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV-KDIVSWNTMIGG 472
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 14/241 (5%)
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YV GDL R++FD++ W L++ YA+ E++ LF M L + +
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 198
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
L A LG++++ K +H Y+ ++ + L+ Y K G + +A +F+ E
Sbjct: 199 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 258
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ +WN+M+ G ++G L F +M+ ++ D T++ LV C++ G + R L
Sbjct: 259 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRAL 318
Query: 367 FDEMESVYGV----SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV--WSGLLG 420
+GV S+E+ + D+ + G + A E+ KM GD + W+ ++
Sbjct: 319 HG-----FGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM---GDTTIVSWTSIIA 370
Query: 421 G 421
Sbjct: 371 A 371
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 98/251 (39%), Gaps = 20/251 (7%)
Query: 194 AHARQLFDRMPFRDAVSWGTLVAG-------YAQSDQCEEAIQLFCNMMDLD------IK 240
+H R +F + P R + T+ ++ + I FC M DL K
Sbjct: 27 SHNRFIFFKQPRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTK 86
Query: 241 PDNIAL-----VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ L S L CA LE GK +H I N I VD L LV Y CG +
Sbjct: 87 SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLV 146
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
+IF+ +F WN ++ A G R S+ F +M + + + T L +
Sbjct: 147 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 206
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
G V E +++ + + G + + G +E A + ++ DV W
Sbjct: 207 ALGKVKECKRVHGYVLKL-GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE-PDVVSW 264
Query: 416 SGLLGGCRIHG 426
+ ++ GC ++G
Sbjct: 265 NSMINGCVVNG 275
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 245/443 (55%), Gaps = 13/443 (2%)
Query: 54 SSPTTDPLSYALSIFNNI-PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFY 112
SS + L + +F + P+ + S+NT+I A LF +MR + D +
Sbjct: 151 SSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVF 210
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
+F LL CS+ + + + +H +L G D+ + N+L+ +Y L A FD +
Sbjct: 211 TFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVM 270
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
++VVS +++ K G + AR F++MP R+ +SW +++ Y Q + E + L+
Sbjct: 271 PIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYN 330
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG------LVD 286
M L + PD + L LS + G+L G+ IH YI+ DSF G L+D
Sbjct: 331 RMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQ------DSFSDPGVTVLNSLID 384
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YA+CG ++T+I +F KN +WN ++ LAMHG + ++++F M+ PD +T
Sbjct: 385 MYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEIT 444
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L CSH GL+++ + F M +Y V E++HY CM DLLGR G + +A+++IK M
Sbjct: 445 FVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDM 504
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
PM DV VW L+G CRIHG+VEI + A + +++L+ +GG++ +++++ +WED+
Sbjct: 505 PMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMK 564
Query: 467 KIRRSLDAGKIKKNAGCSLIQLN 489
++R+ + KK+ G S I++N
Sbjct: 565 RLRKLMRDRGTKKDMGVSSIEIN 587
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 205/458 (44%), Gaps = 72/458 (15%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+++C++I+ + Q+HAH L G P + + + + ++ +S + L +A
Sbjct: 9 LLQQCRSIRHLDQLHAHLLAHG-----PSAVASVVPQLVASYCALSGRAGDVA--LCHAR 61
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F+ +P P F+YN++IRA++ P A+ L + I P+ ++ PF+L+ACS+
Sbjct: 62 RMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRAR 121
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL-YRDVVSCNTLI 184
+ A H +KLG++ VFV N+L+H LRD++ LF E+ +R+VVS NT+I
Sbjct: 122 AAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMI 181
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
G +AG+ + EA LF M + D
Sbjct: 182 GGCAQAGETS-------------------------------EACALFREMRRQGVLADVF 210
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
VS L C++ G LE G+ +H ++ + RVD L LVD Y KCG + A F+
Sbjct: 211 TFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVM 270
Query: 305 QEKNLFTWNAMLVGLAMHGL-----------------------------GRL--SLVYFS 333
KN+ +W +ML LA HG GR +L ++
Sbjct: 271 PIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYN 330
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
RM + PD VT+ G L G + R + ++ + + + D+ R
Sbjct: 331 RMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFS-DPGVTVLNSLIDMYARC 389
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
G ++ ++ + +MP + W+ ++G +HG + A
Sbjct: 390 GQVDTSISLFTEMP-NKNTISWNVIIGALAMHGRAQEA 426
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 264/488 (54%), Gaps = 22/488 (4%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
R ++ Q+HA GLLF +L +L+ AS P S+A +F
Sbjct: 24 RASAVRPGEQLHAAATVSGLLFSPSSFLLNALLHLY--------ASCPLP---SHARKLF 72
Query: 69 NNIPY--PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+ IP+ + Y +IR S PL+A+ + QMR ++P D + L ACS+L
Sbjct: 73 DRIPHSHKDSVDYTALIRC----SHPLDALRFYLQMRQRALPLDGVALICALGACSKLGD 128
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+L +H V+K GF+ VLN +M Y + +A+ +F+EI VVS +++G
Sbjct: 129 SNLVPQMHVGVVKFGFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEG 188
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM---DLDIKPDN 243
VK + + +FD MP R+ V+W L+ GY S +EA L M+ ++
Sbjct: 189 VVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNS 248
Query: 244 IALVSALSACARLGELEQGKNIHRY-IELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
I L S LSAC++ G++ G+ +H Y ++ + + T LVD YAKCG I+ A+ +F
Sbjct: 249 ITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFR 308
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+N+ WNAML GLAMHG+G++ + F+ M+E +KPD VT + L CSH+GLV++
Sbjct: 309 HMPRRNVVAWNAMLCGLAMHGMGKVVVEMFACMVE-EVKPDAVTFMALLSSCSHSGLVEQ 367
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ F ++E YG+ E++HY CM DLLGRAG +EEA +++KK+P+ + V LLG C
Sbjct: 368 GWQYFHDLERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPPNEVVLGSLLGAC 427
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
HG + + E ++++ P + + +L+++YA + + +R+ L I+K G
Sbjct: 428 YAHGKLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRKVLKNRGIRKVPG 487
Query: 483 CSLIQLNG 490
S I ++G
Sbjct: 488 MSSIYVDG 495
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 239/423 (56%), Gaps = 8/423 (1%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P+ ++ +++ +H +VLF +MR + P +L C+ L + + Q I
Sbjct: 238 PNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMI 297
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H ++K GF +F N+L+ +Y + DA++LF E+ +++VS N LI + ++G
Sbjct: 298 HGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVY 357
Query: 194 AHARQLFDRMPFRDA--------VSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
A +L ++ +A ++W ++ G+A EE++++F M ++K +++
Sbjct: 358 DKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVT 417
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+ S LS CA L L G+ +H ++ ++ + + GL++ Y KCG +FE +
Sbjct: 418 IASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLE 477
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++ +WN+M+ G HGLG+ +L F+ MI++ +PDGVT + AL CSHAGLV E
Sbjct: 478 NRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHW 537
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LF +M + + E++HY CM DLLGRAGL+EEA +IK MPM + ++WS LL CR+H
Sbjct: 538 LFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMH 597
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
+ ++AE AA + L + G + +L++++A + RWED ++R S A +KK G S
Sbjct: 598 KDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSARVRISARAKGLKKVPGWSW 657
Query: 486 IQL 488
I++
Sbjct: 658 IEV 660
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 188/380 (49%), Gaps = 24/380 (6%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
++ +++C I+ Q+H+ + G + C + I S +D
Sbjct: 41 FDHLLRQCNGIQHSKQVHSATVVTG----AYCSAFVS-----ARLVSIYSRYGLVSD--- 88
Query: 63 YALSIFNNIP---YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
A +F + P Y + +N+IIRA+ + A+ L+ +MR + D ++FP LLR
Sbjct: 89 -ARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLR 147
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
A S L + ++ + +H V++ GF + V N L+ +Y R+ DA+++FD++ + VVS
Sbjct: 148 ASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVS 207
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
NT++ GY D+ A ++F +M + V+W +L++ +A+ EE + LFC M
Sbjct: 208 WNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMR 267
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ P L LS CA L L G+ IH Y+ F L+ Y K G +
Sbjct: 268 MKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVG 327
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM--IEA--RIKPDGVTILGAL 351
A ++F + KNL +WNA++ A G+ +L S++ +EA +KP+ +T +
Sbjct: 328 DAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAII 387
Query: 352 VGCSHAGLVDEARKLFDEME 371
G + GL +E+ ++F +M+
Sbjct: 388 CGFASKGLGEESLEVFRKMQ 407
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 54/294 (18%)
Query: 89 FSSPLNAVVLFSQMRTVSIP---PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICD 145
F P ++ SQ +++ PDF F LLR C+ + HS + +HS + G C
Sbjct: 15 FCFPPLSINFHSQFSSITYDEDLPDF--FDHLLRQCNGI-QHS--KQVHSATVVTGAYCS 69
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
FV L+ +Y + G ++ AR++F PF
Sbjct: 70 AFVSARLVSIYSRY-------------------------------GLVSDARKVFGSAPF 98
Query: 206 R---DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQG 262
+ + W +++ C EA+QL+ M + + D L A + LG
Sbjct: 99 ECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMC 158
Query: 263 KNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLA 320
KN+H ++ Q + L G L+ YAK ++ A ++F+ + K++ +WN M+ G A
Sbjct: 159 KNLHCHVV--QFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYA 216
Query: 321 ----MHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
++G R+ F +M ++P+ VT L + G ++E LF +M
Sbjct: 217 YNYDVNGASRM----FHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKM 266
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 227/403 (56%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N++I + + L A+ LF+ MR + D+ +F +L ACS L +H+ V
Sbjct: 273 WNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVY 332
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
K+GF D+ + ++L+ +Y R DA +LF ++ D + N++I Y G + ARQ
Sbjct: 333 KVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQ 392
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+FD MP + +SW +++ G++Q+ EA+ LFC M L ++ D +L +SACA +
Sbjct: 393 IFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISS 452
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
LE G+ I + + D +ST LVDFY KCG + ++F+ + + WN+ML+G
Sbjct: 453 LELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMG 512
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
A +G G +L F +M ++P +T +G L C H GLV+E RK F M+ Y ++
Sbjct: 513 YATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINP 572
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
++HY CM DL RAGL+E+A+ +I++MP+ D +WS +L GC HGN + + A+ +
Sbjct: 573 GIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRI 632
Query: 439 MKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
+ L PE+ G Y L+ +YA + W ++R+ + KI K+
Sbjct: 633 IDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDT 675
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 215/426 (50%), Gaps = 31/426 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA +F + S+N++I + A+ F MR+V PD ++ ++
Sbjct: 891 VDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITV 950
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L + I + +++GF+ + V ++ + ++ +RL D+ +F+EI D V C
Sbjct: 951 CSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLC 1010
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I Y +W G+ E A+QLF + +++
Sbjct: 1011 NAMISSY----------------------AW----HGFG-----ENALQLFVLTLRENLR 1039
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P L LSA + L ++QG IH + + + D +++ LV+ YAK G I++A++
Sbjct: 1040 PTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKT 1099
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F ++L +WN M++GLA +G +L F ++ PD +T+ G L+ C+ GLV
Sbjct: 1100 FAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLV 1159
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE +F ME YGV ++HY C+ D++ R G ++EA+++++ MP +W LL
Sbjct: 1160 DEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLC 1219
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C I+G++ E AE VM+L+P+ Y VLA Y RWE +V++ R++ ++K
Sbjct: 1220 ACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKGVRKV 1279
Query: 481 AGCSLI 486
GCS I
Sbjct: 1280 IGCSWI 1285
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 186/403 (46%), Gaps = 58/403 (14%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVL-NSLMHVYCVFHRLRDAQEL 168
D +S L +C+ S + +H LK G + V + N L+ +Y + +R+AQ+L
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQL 64
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
F+E+ R+ S NT+I+GY+K+G + +LFD MP +DA SW +++G+A+ E A
Sbjct: 65 FEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVAR 124
Query: 229 QLF-------------------CN---------MMDLDIKP------DNIALVSALSACA 254
+LF CN DL + P D L + + AC
Sbjct: 125 RLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACT 184
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
LG L+ GK IH I ++++ DS L + LV+ Y KCG I++A + +E + F+ +A
Sbjct: 185 NLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSA 244
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEAR----IKPDGVTIL--GALVGCSHAGLVDEARKLFD 368
++ G A G RM +AR +K + +L + G EA +LF+
Sbjct: 245 LISGYASCG----------RMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFN 294
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEM---IKKMPMGGDVFVWSGLLGGCRIH 425
M GV ++ + + G+I++ +++ + K+ D+ + S L+ ++
Sbjct: 295 NMRR-KGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVD---MY 350
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
+ A + L+ D + + VY+N R +D +I
Sbjct: 351 SKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQI 393
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 185/404 (45%), Gaps = 42/404 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP------DFYSF 114
L A +FN +P+ + ++N++I + P AV LF + +S+ P D +
Sbjct: 120 LEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLF---KDLSLNPLERFCGDTFVL 176
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
++ AC+ L + + IH++++ D + +SL+++Y + A + + +
Sbjct: 177 ATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKE 236
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
D S + LI GY G + AR++F V W ++++GY +++ EA++LF NM
Sbjct: 237 PDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNM 296
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK---- 290
++ D S LSAC+ LG ++QG +H ++ D + + LVD Y+K
Sbjct: 297 RRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRP 356
Query: 291 ---------------------------CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
CG I+ A +IF++ K+L +WN+M+VG + +
Sbjct: 357 DDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNA 416
Query: 324 LGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
+L F M + ++ D ++ G + C+ ++ ++F ++ G+ +
Sbjct: 417 CPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARA-TIIGLEFDQIIS 475
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ D + GL+E ++ +M M D W+ +L G +G+
Sbjct: 476 TSLVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 518
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 118/235 (50%), Gaps = 10/235 (4%)
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
++K+GF F+ N + +Y D+ +F++I+ ++++S N + +V+ G+L A
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI---ALVSALSAC 253
R +FD MP RD VSW T+++GY ++A + F M I+P L+S +S+
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855
Query: 254 ARLGELEQGKNIHRYIELNQIRVDS-FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
R GK IH + N + + + + L+ Y K G ++ A +F + +E ++ +W
Sbjct: 856 CR------GKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISW 909
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
N+++ G L+L F M PD T+ + CS+ +++ ++F
Sbjct: 910 NSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIF 964
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 45/312 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ +P S S+N++I + + P+ A+ LF +M + + D +S ++ AC+
Sbjct: 390 ARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACAS 449
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S L + I ++ +G D + SL+ YC + ++LFD ++ D V N++
Sbjct: 450 ISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSM 509
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY G A +FD+ M + ++P +
Sbjct: 510 LMGYATNGHGIEALNVFDQ-------------------------------MRSVGVQPTD 538
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYINTA 297
I V LSAC G +E+G+ +++D ++ G +VD YA+ G + A
Sbjct: 539 ITFVGVLSACDHCGLVEEGRKW-----FYAMKLDYHINPGIEHYSCMVDLYARAGLLEDA 593
Query: 298 IEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG--VTILGALVGC 354
+ + E K + W+++L G HG L R+I+ + G V + G
Sbjct: 594 MNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATF 653
Query: 355 SHAGLVDEARKL 366
G + RKL
Sbjct: 654 EDWGRSAQVRKL 665
>gi|242084708|ref|XP_002442779.1| hypothetical protein SORBIDRAFT_08g002705 [Sorghum bicolor]
gi|241943472|gb|EES16617.1| hypothetical protein SORBIDRAFT_08g002705 [Sorghum bicolor]
Length = 560
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 236/434 (54%), Gaps = 44/434 (10%)
Query: 96 VVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL----------AQTIHSQVLKLGFICD 145
+ LF+ + ++SIP +FP LL++C++ S +H +VLKLG D
Sbjct: 129 LTLFNHVSSLSIPTPLPAFPALLKSCARAFRLSRRARAAVFAAKGAELHCRVLKLGCGQD 188
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY------------------ 187
+V N+L+ +Y F RL +A++ FDE+ ++ VS N L+ +
Sbjct: 189 RYVQNALVSMYGQFGRLGEARKAFDEMPVKNAVSWNALVVAHGVSGDLQGAERVSQATPE 248
Query: 188 -------------VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
V+ GDL A ++F MP RD +SW +L++GYA+ A+ +F +M
Sbjct: 249 RNISWWNSEIMRNVRLGDLVEAARIFRDMPERDVISWNSLISGYAKLGMYSRALDVFRDM 308
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
DI+P + +VSAL ACA +GELE G+ IH Y++ I D ++ LVD YAKCG +
Sbjct: 309 WKNDIEPTELTVVSALGACAEVGELELGRGIHDYLKSKGIEADGYVGNALVDMYAKCGNL 368
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A ++F+S K++ WN M+VGL++HG +L F M I+PD VT LG L C
Sbjct: 369 KLARQVFDSMSIKDVTCWNTMIVGLSVHGHSHDALKLFDLM---NIEPDHVTFLGVLTAC 425
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
SH+GL++E R F M Y + +KHYGC+ ++L R G + EA +MI MP+ + +
Sbjct: 426 SHSGLLNEGRVYFKSMIEDYKIVPSMKHYGCIINMLCRYGKVHEAYQMINDMPVKANSVL 485
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W ++ CR+HG+ +IA+ A + +L P D G +++ YA A+RW+DV +R +
Sbjct: 486 WKMVMAACRVHGHFDIADRAVHRMHELMPMDDGDVITVSNAYAEAERWDDVEHLRTKVIG 545
Query: 475 GKIKKNAGCSLIQL 488
K+A S + +
Sbjct: 546 CSGSKHAAHSQVHV 559
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 117/289 (40%), Gaps = 36/289 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A IF ++P S+N++I + A+ +F M I P + L A
Sbjct: 267 LVEAARIFRDMPERDVISWNSLISGYAKLGMYSRALDVFRDMWKNDIEPTELTVVSALGA 326
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ L + IH + G D +V N+L+ +Y L+ A+++FD + +DV
Sbjct: 327 CAEVGELELGRGIHDYLKSKGIEADGYVGNALVDMYAKCGNLKLARQVFDSMSIKDVTCW 386
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT+I G G A +LFD M +I+
Sbjct: 387 NTMIVGLSVHGHSHDALKLFDLM----------------------------------NIE 412
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD++ + L+AC+ G L +G+ + + + V S G +++ + G ++ A +
Sbjct: 413 PDHVTFLGVLTACSHSGLLNEGRVYFKSMIEDYKIVPSMKHYGCIINMLCRYGKVHEAYQ 472
Query: 300 IFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
+ K N W ++ +HG ++ RM E DG I
Sbjct: 473 MINDMPVKANSVLWKMVMAACRVHGHFDIADRAVHRMHELMPMDDGDVI 521
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 229/414 (55%), Gaps = 5/414 (1%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
S+N +I H +A++LF + I PD ++ +L + + + IHS
Sbjct: 373 SWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIA 432
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+ G + FV +L+ +YC + + AQ FDEI RD + N LI GY + + R
Sbjct: 433 IVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIR 492
Query: 198 QLFDRMP---FRDAV-SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
+L +RM F V +W +++AG ++ Q + A+QLF M ++PD + L+AC
Sbjct: 493 ELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAAC 552
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
++L + +GK +H Y D+ + LVD YAKCG I +++ NL N
Sbjct: 553 SKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHN 612
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
AML AMHG G +V F RM+++R++PD VT L L C HAG + + F ME+
Sbjct: 613 AMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET- 671
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
Y ++ LKHY CM DLL RAG ++EA ++IK MPM D WS LLGGC IH V + E
Sbjct: 672 YNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEI 731
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
AAE +++L+P + G Y +LA++YA+A RW D+ K R ++ ++K+ GCS I+
Sbjct: 732 AAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIE 785
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 178/375 (47%), Gaps = 19/375 (5%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
T + ++ ++ Q+H+H + G F + + T +L + S +S D
Sbjct: 36 TYSTILQSSNSLTLGKQLHSHSIKTG--FYNHNFVQTKLL-------QMYSINSSFED-- 84
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP--DFYSFPFLLR 119
A +F+ + + S+ ++R H +LF + + DF+ FP +L
Sbjct: 85 --AWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLN 142
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
C L L + +H VLK GF+ +V+V N+L+ +Y L +A+++ + + +D VS
Sbjct: 143 ICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVS 202
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRD----AVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
N++I V G + A L + M + V+W ++ G++ + E+++LF M+
Sbjct: 203 WNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMV 262
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ PD L S L AC+R+ L GK +H YI +++ + F++ LV Y +CG +
Sbjct: 263 GAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMK 322
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
+A +IF K ++N M+VG +G + F +M + ++ D ++ + G
Sbjct: 323 SAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHV 382
Query: 356 HAGLVDEARKLFDEM 370
+ D+A LF ++
Sbjct: 383 DNFMFDDALMLFRDL 397
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 159/303 (52%), Gaps = 6/303 (1%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
P+ +++ +I + + + +V LF++M + PD + +L ACS++ + + +
Sbjct: 233 PNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKEL 292
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H +++ + FV N+L+ +Y ++ A ++F + + S NT+I GY++ G++
Sbjct: 293 HGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNV 352
Query: 194 AHARQLFDRMP----FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
A++LF +M RD +SW +++G+ + ++A+ LF +++ I+PD+ L S
Sbjct: 353 GKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSI 412
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L+ A + + QGK IH + ++ +SF+ LV+ Y KC I A F+ E++
Sbjct: 413 LTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDT 472
Query: 310 FTWNAMLVGLAM-HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
TWNA++ G A + +G++ + RM +P+ T L G D A +LF+
Sbjct: 473 STWNALISGYARCNQIGKIREL-VERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFN 531
Query: 369 EME 371
EM+
Sbjct: 532 EMQ 534
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 52/222 (23%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTI--LYAITTFKPISSASSP 56
T+ + C + IH Q+HA+ + G + S HI T+ +YA
Sbjct: 544 TVGIILAACSKLATIHRGKQVHAYSIRAG--YDSDAHIGATLVDMYA------------- 588
Query: 57 TTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
+ + ++N I P+ +N ++ A+ + +V+F +M + PD +F
Sbjct: 589 KCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLS 648
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+L +C +H+ +K+G+ C LM Y + L+
Sbjct: 649 VLSSC-----------VHAGSIKIGYECFY-----LMETYNITPTLKH------------ 680
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFR-DAVSWGTLVAG 217
+C ++D +AG L A QL MP D+V+W L+ G
Sbjct: 681 -YTC--MVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGG 719
>gi|449506393|ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 614
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 230/417 (55%), Gaps = 37/417 (8%)
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+PS+F +N IIR++T P A+ ++ M I PD Y+ P + +A S + L
Sbjct: 226 HPSSFYWNIIIRSYTRLEVPRIALFVYIAMLQAGILPDCYTLPIVFKALSLAYAFDLGLQ 285
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+HS ++LGF D + S + LI Y K GD
Sbjct: 286 LHSVAIRLGFEFDQY-------------------------------SESGLISLYSKIGD 314
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
L A ++F++ R SW ++AG +Q + +EA+ +F + ++PD+ +VS SA
Sbjct: 315 LECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSVTSA 374
Query: 253 CARLGELEQGKNIHRYIELNQIRVDS----FLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
C LG LE +H+++ Q++V + L+D Y KCG ++ A+++F + +N
Sbjct: 375 CGSLGNLELSLQMHKFVF--QVKVTGKSNILMLNSLIDMYGKCGRMDLAMKVFSNMGHRN 432
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ +W +++VG AMHG + +L F M EA + P+ VT +G L C H G+++E + FD
Sbjct: 433 VSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHYFD 492
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M++VYG +L HYGCM DLL +AGL+EEA MI++MPM + +W L+GGC HGNV
Sbjct: 493 MMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNV 552
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
EI E A +H+ +L+P + GVY VL+++YA W++ K+R + ++ K G SL
Sbjct: 553 EIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYSL 609
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 210/357 (58%), Gaps = 5/357 (1%)
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQE-LFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
K G + V NSL+ +YC L A+ L+ DVVS NT++ GY K GDL A
Sbjct: 105 FKCGALAHPVVTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAA 164
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
R++F RMP R+ VSW +V ++ + EA+ +F MM + +PD + LVS L ACA L
Sbjct: 165 REVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHL 224
Query: 257 GELEQGKNIHRYIELNQI---RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
G +E+G+ +HRY+E R + L T LVD Y KCG + A ++F+ +++ WN
Sbjct: 225 GAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWN 284
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
AM+ GLAM+G G +L F RM++ P+ T + L C+H G VDE +++F M+
Sbjct: 285 AMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD- 343
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ + +HYGC+ADLLGRAG +EEA ++ MPM W L+ C++H ++ + E
Sbjct: 344 YGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGER 403
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ +++L+P DGG Y VL ++YA RWE+ IR+ ++ KK G S I+LNG
Sbjct: 404 VGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNG 460
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 233/429 (54%), Gaps = 31/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA IF+ +P+ F +NTIIR +++ SP++A+ L+ M I P+ Y+F F+L A
Sbjct: 17 VAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNA 76
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C +L Q +HSQ++K G + +LN L+ +Y
Sbjct: 77 CCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLY------------------------ 112
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
G + +A +FD MP D+ SW T+V+GY+Q+ Q E ++L M ++
Sbjct: 113 -------AACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVS 165
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D L S + C LG L+ GK +H YI+ +++D L T LV Y+KCG ++ A+++
Sbjct: 166 SDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKV 225
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ E+++ TW+ M+ G A+HG +L F M ++I P+ VT L SH+GLV
Sbjct: 226 FQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLV 285
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++ ++F+ M + Y ++ ++KHYGCM DL RAG++ A + I+ MP+ +V +W LLG
Sbjct: 286 EKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLG 345
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C+ HG + E + ++KL P Y +++VYA+ RW V ++R + KK
Sbjct: 346 ACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQ 405
Query: 481 AGCSLIQLN 489
G S I++N
Sbjct: 406 HGWSSIEIN 414
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 2/241 (0%)
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G +A+A +F + W T++ GY+ SD AI L+ +M I P++ L
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
+AC +L L +G+ +H I + ++ L GL+ YA CG ++ A +F+ E +
Sbjct: 75 NACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSA 134
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W+ M+ G + +G +L M + D T+ + C G++D + + +
Sbjct: 135 SWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYI 194
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+ GV ++ + + + G ++ AL++ + M DV WS ++ G IHG+ E
Sbjct: 195 DK-EGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAE-RDVTTWSIMIAGYAIHGHDEK 252
Query: 431 A 431
A
Sbjct: 253 A 253
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 264/497 (53%), Gaps = 59/497 (11%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + Q+ Q+HA L P T LY I SS +D ++YA +F+
Sbjct: 58 CSDMSQLKQLHAFTLRTTY----PEEPATLFLYG-----KILQLSSSFSD-VNYAFRVFD 107
Query: 70 NIPYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCS 126
+I S+F +NT+IRA H + S A +L+ +M PD ++FPF+L+AC+ +
Sbjct: 108 SIENHSSFMWNTLIRACAHDV-SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S + +H Q++K GF DV+V N L+H+Y SC L
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYG---------------------SCGCL--- 202
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
DLA R++FD MP R VSW +++ + + + A+QLF M +PD +
Sbjct: 203 -----DLA--RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF-REMQRSFEPDGYTM 254
Query: 247 VSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S LSACA LG L G H ++ + +D + L++ Y KCG + A ++F+
Sbjct: 255 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 314
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR--IKPDGVTILGALVGCSHAGLVD 361
Q+++L +WNAM++G A HG ++ +F RM++ R ++P+ VT +G L+ C+H G V+
Sbjct: 315 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 374
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ R+ FD M Y + L+HYGC+ DL+ RAG I EA++M+ MPM D +W LL
Sbjct: 375 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Query: 422 CRIHG-NVEIAEAAAEHVMKLKPED-------GGVYKVLADVYANADRWEDVVKIRRSLD 473
C G +VE++E A +++ K ++ G Y +L+ VYA+A RW DV +R+ +
Sbjct: 435 CCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMS 494
Query: 474 AGKIKKNAGCSLIQLNG 490
I+K GCS I++NG
Sbjct: 495 EHGIRKEPGCSSIEING 511
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 232/429 (54%), Gaps = 33/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS AL F +P T S+NT+I A+ +F +M + PD + +L A
Sbjct: 273 LSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSA 332
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL +HS + G CD + NSL
Sbjct: 333 CAQLGELRKGMHVHSYIKDNGICCDNILTNSL---------------------------- 364
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
I+ Y K GD+A A ++F M +D VSW +V GY + Q A LF M ++
Sbjct: 365 ---INMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVV 421
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ALVS LSAC++LG L++G+ IH YIE + D L + LVD YAKCG I+TA EI
Sbjct: 422 AHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEI 481
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGL 359
F Q K +WNAM+ GLA +G G+ ++ F +M+E + KPDG+T+ L C+H G+
Sbjct: 482 FRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGM 541
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDE + F M S+ GV + +HYGC+ DLLGRAG+++EA IKKMP+ + +W LL
Sbjct: 542 VDEGLRYFYLMSSL-GVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLL 600
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H +++ + +H++ + P D GV+ ++++++A +W+DV +R + + I+K
Sbjct: 601 AACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEK 660
Query: 480 NAGCSLIQL 488
G S +Q+
Sbjct: 661 TPGHSSVQV 669
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 200/428 (46%), Gaps = 45/428 (10%)
Query: 22 HFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNT 81
H L + + F S +++ ++ F+ + AS +F + S+ +
Sbjct: 144 HALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASK-----------VFEEMYERDVVSWTS 192
Query: 82 IIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLG 141
+I A + + S+M+ I P+ + LL AC Q + + +++QV K G
Sbjct: 193 MISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFG 252
Query: 142 FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFD 201
DV + N+L I Y K G L+ A + F
Sbjct: 253 IEADVDIRNAL-------------------------------ISMYTKCGCLSDALEAFQ 281
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQ 261
MP R SW TL+ G+ Q+ + +EA+++F M+ + PD I LVS LSACA+LGEL +
Sbjct: 282 AMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRK 341
Query: 262 GKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
G ++H YI+ N I D+ L+ L++ YAKCG + A +F++ +K++ +W M+ G
Sbjct: 342 GMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVK 401
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
++ F M A + + ++ L CS G +D+ R++ +E + V+K+L
Sbjct: 402 GHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEM-NVAKDLC 460
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL 441
+ D+ + G I+ A E+ +KM W+ ++GG +G + A + +++L
Sbjct: 461 LESALVDMYAKCGCIDTASEIFRKMQH-KQTLSWNAMIGGLASNGYGKEAVELFDQMLEL 519
Query: 442 K-PEDGGV 448
+ P+ G+
Sbjct: 520 QDPKPDGI 527
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 152/316 (48%), Gaps = 37/316 (11%)
Query: 53 ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFY 112
AS + YA +F+ + P+ F +N +IR ++ +P +A+ +F +MR + PD Y
Sbjct: 60 ASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNY 119
Query: 113 SFPFLLRACSQ---LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
+ ++ A + L S IH+ V ++GF DVFV++ L++ Y F + +A ++F
Sbjct: 120 TMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVF 179
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
+E+ RDV VSW ++++ AQ ++ ++
Sbjct: 180 EEMYERDV-------------------------------VSWTSMISACAQCGHWDKVLK 208
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+ M I P+ + ++S LSAC + +++G+ ++ + I D + L+ Y
Sbjct: 209 MLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYT 268
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG ++ A+E F++ + +WN ++ G + + +L F M+ + PDG+T++
Sbjct: 269 KCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVS 328
Query: 350 ALVGCSHAGLVDEARK 365
L C+ G E RK
Sbjct: 329 VLSACAQLG---ELRK 341
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 4/219 (1%)
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
D+ +AR++FD M +A W ++ GY+ + +A+ +F M + PDN + + +S
Sbjct: 67 DMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVS 126
Query: 252 ACARLGELE---QGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
A A L+ G IH + D F+ +GLV++Y + A ++FE E++
Sbjct: 127 ASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERD 186
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ +W +M+ A G L S M I P+ VTI+ L C VDE R +++
Sbjct: 187 VVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYN 246
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
++ +G+ ++ + + + G + +ALE + MP
Sbjct: 247 QVGK-FGIEADVDIRNALISMYTKCGCLSDALEAFQAMP 284
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 238/431 (55%), Gaps = 3/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + +P + S+ T+I H + AV L+SQM P+ F +L A
Sbjct: 332 LDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSA 391
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L IH++ LK+G +VFV +SL+ +YC + RDAQ +FD + +++V
Sbjct: 392 CATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCW 451
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+L GY G + A LF +MP R+ SW T+++GYAQ+ Q +A++ F M+
Sbjct: 452 NSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQV 511
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P I S L ACA L L GK H + I+L + F+ T L D YAK G + ++
Sbjct: 512 PGEITFSSVLLACANLCSLVTGKMAHAKTIKLG-MEESIFIGTALSDMYAKSGDLQSSKR 570
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F E+N TW AM+ GLA +GL S++ F M+ + P+ T L L CSH GL
Sbjct: 571 MFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGL 630
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V++A F++M++ +G+S + KHY CM D+L RAG + EA ++ K P + W+ LL
Sbjct: 631 VEQAIHYFEKMQA-WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALL 689
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C + N EI E AA+ + +L ++ Y +L+++YA+ RW+D +IR + +KK
Sbjct: 690 SACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKK 749
Query: 480 NAGCSLIQLNG 490
+ GCS +Q+ G
Sbjct: 750 DGGCSWVQVRG 760
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 183/404 (45%), Gaps = 46/404 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ ++ P S + I NA+ +F +M + + P+ +F +++AC
Sbjct: 202 AVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVG 261
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
LA +I +K F + V NSL+ +Y A+++FDE+ +DVVS
Sbjct: 262 AGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTA 321
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y ++GDL AR++ D MP R+ VSWGTL+A + Q EA++L+ M+ +P+
Sbjct: 322 LLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPN 381
Query: 243 NIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
S LSACA L +L G IH R +++ + F+S+ L+D Y KC A IF
Sbjct: 382 ISCFSSVLSACATLEDLRGGARIHARSLKMGS-STNVFVSSSLIDMYCKCKKCRDAQTIF 440
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK-------------------- 341
++ EKN+ WN++ G + +G ++ F +M +
Sbjct: 441 DTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALR 500
Query: 342 -----------PDGVTILGALVGCSH-----AGLVDEARKLFDEMESVYGVSKELKHYGC 385
P +T L+ C++ G + A+ + ME + L
Sbjct: 501 SFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTAL----- 555
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+D+ ++G ++ + M +MP DV W+ ++ G +G E
Sbjct: 556 -SDMYAKSGDLQSSKRMFYQMPERNDV-TWTAMIQGLAENGLAE 597
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 135/332 (40%), Gaps = 49/332 (14%)
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR--------------------------- 161
LA ++H+ ++ G D V + L+ Y F R
Sbjct: 101 LALSLHAHAVRSGVAADTSVASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDFMVH 160
Query: 162 -------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+ A+ LFD + R VVS T++D +K G +A A +L+++ P +
Sbjct: 161 EHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTAT 220
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI-HRYIELNQ 273
++G+ +++ A+ +F M+ ++P+ I V + AC GE +I I+ N
Sbjct: 221 ISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNF 280
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
+ L+ Y + G A ++F+ K++ +W A+L + G L
Sbjct: 281 FESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESG----DLDGAR 336
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM------ESVYGVSKELKHYGCMA 387
R+++A + + V+ + G EA KL+ +M ++ S L +
Sbjct: 337 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLE 396
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
DL G A + +L KM +VFV S L+
Sbjct: 397 DLRGGARIHARSL----KMGSSTNVFVSSSLI 424
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 239/429 (55%), Gaps = 4/429 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQ-MRTVSIPPDFYSFPFLLRACS 122
AL+ F + S+N++I A+ FS ++ S+ PD +S L AC+
Sbjct: 192 ALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACA 251
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE--ILYRDVVSC 180
L S + IH +++ F V N+L+ +Y + A+ + ++ I DV++
Sbjct: 252 NLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAF 311
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L++GYVK GD+ ARQ+F+ + D V+W ++ GY Q+ +AI++F M+ +
Sbjct: 312 TALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPR 371
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P++ L + LSA + + L GK IH + + + L YAK G IN A ++
Sbjct: 372 PNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKV 431
Query: 301 FES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
F Q ++ +W +M++ LA HGLG ++ F +M+ IKPD +T +G L C+H GL
Sbjct: 432 FNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGL 491
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V++ R FD M++V+ + L HY CM DL GRAGL++EA + ++ MPM DV W LL
Sbjct: 492 VEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLL 551
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C+++ NV++A+ AAE ++ ++P + G Y LA+VY++ +W+D KIR+ + A +KK
Sbjct: 552 SSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKK 611
Query: 480 NAGCSLIQL 488
G S +Q+
Sbjct: 612 EQGLSWVQI 620
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 211/482 (43%), Gaps = 80/482 (16%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ IP + S+ TII + +A+ +F M + P ++ +L +
Sbjct: 57 LEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLAS 116
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ S + + +HS V+KLG V V NSL+++Y L+ A+ +FD + R+ S
Sbjct: 117 CAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSW 176
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDI 239
N +I ++ G + A F+ + RD VSW +++AG Q EA+Q F +++ D +
Sbjct: 177 NAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRY------------------------------- 268
KPD +L SALSACA L +L GK IH Y
Sbjct: 237 KPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARR 296
Query: 269 -IELNQIR-VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGR 326
IE + I +D T L++ Y K G I A +IF S ++ ++ W AM+VG +GL
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNN 356
Query: 327 LSLVYFSRMIEARIKPDGVTILGALVGCS------------------------------- 355
++ F M+ +P+ T+ L S
Sbjct: 357 DAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALT 416
Query: 356 ----HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG- 410
AG ++ ARK+F+ + +++ + M L + GL EEA+E+ ++M G
Sbjct: 417 TMYAKAGSINGARKVFNLLRQ----NRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGI 472
Query: 411 --DVFVWSGLLGGCRIHGNVEIAEA---AAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
D + G+L C G VE + ++V K+ P Y + D++ A ++
Sbjct: 473 KPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSH-YACMVDLFGRAGLLQEA 531
Query: 466 VK 467
K
Sbjct: 532 YK 533
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 165/330 (50%), Gaps = 36/330 (10%)
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
++KLG V+++N+LM++Y DA +LF+E+ + S NT++ GY K G L A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
Q+FD +P RD+VSW T++ GY Q + E+AI++F +M+ + P L + L++CA
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 257 GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK-------------------------- 290
G GK +H ++ + ++ L++ YAK
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 291 -----CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDG 344
CG ++ A+ FE E+++ +WN+M+ G HG +L +FS ++ + +KPD
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR 240
Query: 345 VTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
++ AL C++ + +++ + +++ S + + + + ++G +E A +I
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN--ALISMYAKSGGVEIARRII 298
Query: 404 KKMPMGG-DVFVWSGLLGGCRIHGNVEIAE 432
++ + DV ++ LL G G++ A
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPAR 328
>gi|115450020|ref|NP_001048611.1| Os02g0830000 [Oryza sativa Japonica Group]
gi|48716334|dbj|BAD22946.1| pentatricopeptide repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|113538142|dbj|BAF10525.1| Os02g0830000 [Oryza sativa Japonica Group]
gi|125584254|gb|EAZ25185.1| hypothetical protein OsJ_08985 [Oryza sativa Japonica Group]
Length = 500
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 253/440 (57%), Gaps = 17/440 (3%)
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV--SIP--PDFYSFPFLLRAC 121
S+ + +P++ + + +H+ SPL A+ LF ++R + + P P+ Y+F FLL A
Sbjct: 33 SLLADRFFPNSLLRSLLPPSHS--HSPLRALRLFPRLRRIIATNPFFPNAYTFSFLLTAS 90
Query: 122 SQLCS--HS-----LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD-EIL 173
+ L H+ L +++H+ + + +V N L+H Y L A+ +FD +
Sbjct: 91 ASLAPLPHAASPRVLVESLHALAILVACDAHAYVSNGLIHAYASCALLCSARRVFDVNVS 150
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
RDV S +L+ Y +A L HAR LFD MP + ++W +++ Y + EA+ +F
Sbjct: 151 CRDVCSWTSLLTAYGRAARLHHARALFDAMPHKTTIAWAAILSAYVGAGSFAEAVDVFQE 210
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI--ELNQIRVDSFLSTGLVDFYAKC 291
M+ ++P+ ++S L+AC LG LEQG+ +H ++ + D ++T LVD YAKC
Sbjct: 211 MLRARVRPNRAVILSVLAACGALGALEQGRWVHAHLVAAHGAMAKDGMVATALVDMYAKC 270
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G + TA ++F E+++F + AM+ GL+ HG ++ F RM E ++P+ VT + L
Sbjct: 271 GSLETARQVFSGMAERDVFAYTAMVSGLSDHGRCVEAIELFGRMQEEGVRPNEVTFICVL 330
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
C AGLV AR++ M +V+G+ ++HYG M D+LGRAG++EEALE++++MPM D
Sbjct: 331 SACGRAGLVGRAREILGSMSAVHGMEAGVEHYGSMVDVLGRAGMVEEALEVVRRMPMRPD 390
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPED-GGVYKVLADVYANADRWEDVVKIRR 470
+V LL C G+ E E A + +L +D GV L+++YA +WE+VV +RR
Sbjct: 391 SYVLGALLNACVARGDTEGGEEVAAMMAELGLDDRSGVQVQLSNLYAGRGKWEEVVGVRR 450
Query: 471 SLDAGKIKKNAGCSLIQLNG 490
++ K+ K GCS+++++G
Sbjct: 451 GMEERKVVKVPGCSMVEVDG 470
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 34/243 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +A ++F+ +P+ +T ++ I+ A+ S AV +F +M + P+ +L A
Sbjct: 170 LHHARALFDAMPHKTTIAWAAILSAYVGAGSFAEAVDVFQEMLRARVRPNRAVILSVLAA 229
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L + + +H+ ++ + +D +
Sbjct: 230 CGALGALEQGRWVHAHLVAA-----------------------------HGAMAKDGMVA 260
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D Y K G L ARQ+F M RD ++ +V+G + +C EAI+LF M + ++
Sbjct: 261 TALVDMYAKCGSLETARQVFSGMAERDVFAYTAMVSGLSDHGRCVEAIELFGRMQEEGVR 320
Query: 241 PDNIALVSALSACARLGELEQGKNI---HRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
P+ + + LSAC R G + + + I + + V+ + S +VD + G + A
Sbjct: 321 PNEVTFICVLSACGRAGLVGRAREILGSMSAVHGMEAGVEHYGS--MVDVLGRAGMVEEA 378
Query: 298 IEI 300
+E+
Sbjct: 379 LEV 381
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 229/431 (53%), Gaps = 32/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ +F+ S+ +I S L A+ F +M+ + + + +L+A
Sbjct: 154 FEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKA 213
Query: 121 CSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+ ++IH L+ G + CDVF+ +SL
Sbjct: 214 TRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSL--------------------------- 246
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
+D Y K G A+++FD MP R+ V+W L+AGY Q E+ + +F M+ D+
Sbjct: 247 ----VDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDV 302
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P+ L S LSACA +G L +G+ +H Y+ N I +++ + T L+DFYAKCG + AI
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAIL 362
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+FE +EKN++TW AM+ G A HG ++ F M+ + + P+ VT + L C+H GL
Sbjct: 363 VFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGL 422
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E R+LF M+ + + + HY CM DL GR GL+EEA +I++MPM VW L
Sbjct: 423 VEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALF 482
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C IH + E+ + AA V+KL+P G Y +LA++Y+ + W+DV ++R+ + ++ K
Sbjct: 483 GSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVK 542
Query: 480 NAGCSLIQLNG 490
+ GCS I++ G
Sbjct: 543 SPGCSWIEVKG 553
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 181/420 (43%), Gaps = 64/420 (15%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTF 77
QIH LT + + L+ +L T YA + I PS
Sbjct: 20 QIHCLVLTSPIFYTRRDLFLSRLLRRCTA-----------ATQFRYARRLLCQIQTPSIQ 68
Query: 78 SYNTIIRAHTLFSSPLN---AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
+++++ H LN + + + QMR + P ++FP LL+A +L + Q H
Sbjct: 69 LWDSLV-GHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQ-FH 126
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+ +LK GF D+FV NSL I GY G
Sbjct: 127 AHILKFGFDSDLFVRNSL-------------------------------ISGYSNCGLFE 155
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACA 254
++FD +D VSW ++ G+ ++D EA+ F M + + + +VS L A
Sbjct: 156 FGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATR 215
Query: 255 RLGELEQGKNIHR-YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
+ ++ G++IH Y+E ++R D F+ + LVD Y KCG + A ++F+ +N+ TW
Sbjct: 216 KAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWT 275
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF------ 367
A++ G + F M+++ + P+ T+ L C+H G + R++
Sbjct: 276 ALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKN 335
Query: 368 -DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
E+ + G + + D + G +EEA+ + +++ +V+ W+ ++ G HG
Sbjct: 336 SIEINTTVGTT--------LIDFYAKCGCLEEAILVFERL-REKNVYTWTAMINGFAAHG 386
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 232/429 (54%), Gaps = 33/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
LS AL F +P T S+NT+I A+ +F +M + PD + +L A
Sbjct: 273 LSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSA 332
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+QL +HS + G CD + NSL
Sbjct: 333 CAQLGELRKGMHVHSYIKDNGICCDNILTNSL---------------------------- 364
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
I+ Y K GD+A A ++F M +D VSW +V GY + Q A LF M ++
Sbjct: 365 ---INMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVV 421
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ALVS LSAC++LG L++G+ IH YIE + D L + LVD YAKCG I+TA EI
Sbjct: 422 AHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEI 481
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGL 359
F Q K +WNAM+ GLA +G G+ ++ F +M+E + KPDG+T+ L C+H G+
Sbjct: 482 FRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGM 541
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDE + F M S+ GV + +HYGC+ DLLGRAG+++EA IKKMP+ + +W LL
Sbjct: 542 VDEGLRYFYLMSSL-GVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLL 600
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H +++ + +H++ + P D GV+ ++++++A +W+DV +R + + I+K
Sbjct: 601 AACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEK 660
Query: 480 NAGCSLIQL 488
G S +Q+
Sbjct: 661 TPGHSSVQV 669
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 200/428 (46%), Gaps = 45/428 (10%)
Query: 22 HFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNT 81
H L + + F S +++ ++ F+ + AS +F + S+ +
Sbjct: 144 HALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASK-----------VFEEMYERDVVSWTS 192
Query: 82 IIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLG 141
+I A + + S+M+ I P+ + LL AC Q + + +++QV K G
Sbjct: 193 MISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFG 252
Query: 142 FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFD 201
DV + N+L I Y K G L+ A + F
Sbjct: 253 IEADVDIRNAL-------------------------------ISMYTKCGCLSDALEAFQ 281
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQ 261
MP R SW TL+ G+ Q+ + +EA+++F M+ + PD I LVS LSACA+LGEL +
Sbjct: 282 AMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRK 341
Query: 262 GKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
G ++H YI+ N I D+ L+ L++ YAKCG + A +F++ +K++ +W M+ G
Sbjct: 342 GMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVK 401
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
++ F M A + + ++ L CS G +D+ R++ +E + V+K+L
Sbjct: 402 GHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEM-NVAKDLC 460
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL 441
+ D+ + G I+ A E+ +KM W+ ++GG +G + A + +++L
Sbjct: 461 LESALVDMYAKCGCIDTASEIFRKMQH-KQTLSWNAMIGGLASNGYGKEAVELFDQMLEL 519
Query: 442 K-PEDGGV 448
+ P+ G+
Sbjct: 520 QDPKPDGI 527
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 153/316 (48%), Gaps = 37/316 (11%)
Query: 53 ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFY 112
AS + YA +F+ + P+ F +N +IR ++ +P +A+ +F +MR + PD Y
Sbjct: 60 ASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNY 119
Query: 113 SFPFLLRACSQ---LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
+ ++ A + L S IH+ V ++GF DVFV++ L++ Y F +++A ++F
Sbjct: 120 TMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVF 179
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
+E+ RDV VSW ++++ AQ ++ ++
Sbjct: 180 EEMYERDV-------------------------------VSWTSMISACAQCGHWDKVLK 208
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+ M I P+ + ++S LSAC + +++G+ ++ + I D + L+ Y
Sbjct: 209 MLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYT 268
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG ++ A+E F++ + +WN ++ G + + +L F M+ + PDG+T++
Sbjct: 269 KCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVS 328
Query: 350 ALVGCSHAGLVDEARK 365
L C+ G E RK
Sbjct: 329 VLSACAQLG---ELRK 341
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 4/219 (1%)
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
D+ +AR++FD M +A W ++ GY+ + +A+ +F M + PDN + + +S
Sbjct: 67 DMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVS 126
Query: 252 ACARLGELE---QGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
A A L+ G IH + D F+ +GLV++Y + A ++FE E++
Sbjct: 127 ASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERD 186
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ +W +M+ A G L S M I P+ VTI+ L C VDE R +++
Sbjct: 187 VVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYN 246
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
++ +G+ ++ + + + G + +ALE + MP
Sbjct: 247 QVGK-FGIEADVDIRNALISMYTKCGCLSDALEAFQAMP 284
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 273/552 (49%), Gaps = 80/552 (14%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
++L K CK+ ++QIHA + KGL S+SS ++
Sbjct: 11 LSLETLFKLCKSEIHLNQIHARIIRKGLE------------QDQNLISIFISSSSSSSSS 58
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHT---LFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
LSY+ S+F +P P T+ +N +I+ ++ LF ++ +L MRT PD Y+FP +
Sbjct: 59 LSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVS--ILMRMMRTGLARPDEYTFPLV 116
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNS-------------------------- 151
++ CS + ++H VL++GF DV V S
Sbjct: 117 MKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNA 176
Query: 152 -----LMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR 206
L+ Y L +A+ +FD + R++ S N L+DG VK+GDL +A++LFD MP R
Sbjct: 177 VSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR 236
Query: 207 DAVS-------------------------------WGTLVAGYAQSDQCEEAIQLFCNMM 235
D +S W L+ GYAQ+ Q EA ++F M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS-FLSTGLVDFYAKCGYI 294
++KPD +V +SAC+++G E + + Y+ + S ++ L+D AKCG++
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+ A ++FE +++L ++ +M+ G+A+HG G ++ F +M++ I PD V L C
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVC 416
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ LV+E + F+ M Y + HY C+ +LL R G ++EA E+IK MP
Sbjct: 417 GQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA 476
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LLGGC +HGN EIAE A H+ +L+P+ G Y +L+++YA DRW DV +R ++
Sbjct: 477 WGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNE 536
Query: 475 GKIKKNAGCSLI 486
I K G S I
Sbjct: 537 NGITKICGRSWI 548
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 234/411 (56%), Gaps = 26/411 (6%)
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
++ + + PD S +L AC+ + + + +H ++ G D+FV N+L+ +Y
Sbjct: 3 KLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCG 62
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRD----AVSWGTLVA 216
+ +A ++FD I +DVVS N +++GY + G A LF++M + VSW ++A
Sbjct: 63 MVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIA 122
Query: 217 GYAQSD-QCE--------------EAIQLFCNMMDLD--IKPDNIALVSALSACARLGEL 259
+AQ CE +A++LF M D +KP+ + AL ACARL L
Sbjct: 123 AFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAAL 182
Query: 260 EQGKNIHRYIELNQIRVDS---FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML 316
G+ IH YI N DS +++ L+D YAK G I+ A +F++ ++KN +W +++
Sbjct: 183 RLGRQIHAYILRNHF--DSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLM 240
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
G MHG G+ +L F M ++PDGVT+L L CSH+G++D+ + F+ M +GV
Sbjct: 241 TGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGV 300
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
+HY CM DLLGRAG + EA+E+I+ M M VW LL GCRIH NVE+ E AA+
Sbjct: 301 IPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAK 360
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+++L E+ G Y +L+++YANA RW+DV ++R + I+K GCS +Q
Sbjct: 361 QLLELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQ 411
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%)
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
C + D+D++PD ++LV+ L ACA +G GK +H + D F+ LVD YAKC
Sbjct: 2 CKLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKC 61
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G ++ A ++F+ +EK++ +WNAM+ G + G +L F +M E I+ + V+ +
Sbjct: 62 GMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVI 121
Query: 352 VGCSHAGLVDEARKLFDEME 371
+ GL E +F EM+
Sbjct: 122 AAFAQRGLGCETLDVFREMQ 141
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 264/497 (53%), Gaps = 59/497 (11%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + Q+ Q+HA L P T LY I SS +D ++YA +F+
Sbjct: 49 CSDMSQLKQLHAFTLRTTY----PEEPATLFLYG-----KILQLSSSFSD-VNYAFRVFD 98
Query: 70 NIPYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCS 126
+I S+F +NT+IRA H + S A +L+ +M PD ++FPF+L+AC+ +
Sbjct: 99 SIENHSSFMWNTLIRACAHDV-SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 157
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S + +H Q++K GF DV+V N L+H+Y SC L
Sbjct: 158 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYG---------------------SCGCL--- 193
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
DLA R++FD MP R VSW +++ + + + A+QLF M +PD +
Sbjct: 194 -----DLA--RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF-REMQRSFEPDGYTM 245
Query: 247 VSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S LSACA LG L G H ++ + +D + L++ Y KCG + A ++F+
Sbjct: 246 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 305
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR--IKPDGVTILGALVGCSHAGLVD 361
Q+++L +WNAM++G A HG ++ +F RM++ R ++P+ VT +G L+ C+H G V+
Sbjct: 306 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 365
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ R+ FD M Y + L+HYGC+ DL+ RAG I EA++M+ MPM D +W LL
Sbjct: 366 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 425
Query: 422 CRIHG-NVEIAEAAAEHVMKLKPED-------GGVYKVLADVYANADRWEDVVKIRRSLD 473
C G +VE++E A +++ K ++ G Y +L+ VYA+A RW DV +R+ +
Sbjct: 426 CCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMS 485
Query: 474 AGKIKKNAGCSLIQLNG 490
I+K GCS I++NG
Sbjct: 486 EHGIRKEPGCSSIEING 502
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 236/426 (55%), Gaps = 4/426 (0%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
N + S+ + I T A FS MR + P+ +F LL C S
Sbjct: 17 LNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSG 76
Query: 128 S--LAQTIHSQVLKLGF-ICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S L +H KLG V V +++ +Y R++ A+ +FD + ++ V+ NT+I
Sbjct: 77 SEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMI 136
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
DGY++ G + +A ++FD+MP RD +SW ++ G+ + EEA+ F M +KPD +
Sbjct: 137 DGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYV 196
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
A+++AL+AC LG L G +HRY+ + + +S L+D Y +CG + A E+F+
Sbjct: 197 AIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKM 256
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++ + +WN+++VG A +G SLVYF +M E KPD VT GAL CSH GLV+E
Sbjct: 257 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGL 316
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F M+ + +S ++HYGC+ DL RAG +EEAL++++ MPM + V LL CR
Sbjct: 317 RYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACRT 376
Query: 425 HGNVEI-AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HGN + AE +H+ + + Y +L+++YA +WE ++RR + +KK G
Sbjct: 377 HGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGF 436
Query: 484 SLIQLN 489
S I+++
Sbjct: 437 SSIEID 442
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 43/267 (16%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ +F+ +P S+ +I A+ F +M+ + PD+ + L AC+
Sbjct: 148 AVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNACTN 207
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + S +H V+ F +V V NSL+ +YC + A+E+FD++ R VVS N++
Sbjct: 208 LGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSV 267
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+A + E++ F M + KPD
Sbjct: 268 I-------------------------------VGFAANGNAHESLVYFRKMQEEGFKPDA 296
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYINTA 297
+ AL+AC+ +G +E+G RY + ++ D +S LVD Y++ G + A
Sbjct: 297 VTFTGALTACSHVGLVEEGL---RYFQ--TMKRDHRISPRIEHYGCLVDLYSRAGRLEEA 351
Query: 298 IEIFESSQEK-NLFTWNAMLVGLAMHG 323
+++ +S K N ++L HG
Sbjct: 352 LKVVQSMPMKPNEVVIGSLLAACRTHG 378
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 210/357 (58%), Gaps = 5/357 (1%)
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQE-LFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
K G + V NSL+ +YC + A+ L+ DVVS NT++ GY K GDL A
Sbjct: 105 FKCGALAHPVVTNSLLKLYCSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAA 164
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
R++F RMP R+ VSW +V ++ + EA+ +F MM + +PD + LVS L ACA L
Sbjct: 165 REVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHL 224
Query: 257 GELEQGKNIHRYIELNQI---RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
G +E+G+ +HRY+E R + L T LVD Y KCG + A ++F+ +++ WN
Sbjct: 225 GAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWN 284
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV 373
AM+ GLAM+G G +L F RM++ P+ T + L C+H G VDE +++F M+
Sbjct: 285 AMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD- 343
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
YG+ + +HYGC+ADLLGRAG +EEA ++ MPM W L+ C++H ++ + E
Sbjct: 344 YGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGER 403
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ +++L+P DGG Y VL ++YA RWE+ IR+ ++ KK G S I+LNG
Sbjct: 404 VGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNG 460
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/478 (33%), Positives = 258/478 (53%), Gaps = 50/478 (10%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI-PYPS- 75
QIHA L G+ P + +L+ + + PL YA+++ + + P+
Sbjct: 33 QIHARALRAGVPTSHPL-LAKHLLFHLAALR---------APPLRYAVAVLSRLLPHGPL 82
Query: 76 -TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
F NT++R SP V L R +++P D +++P L++AC++L + + +H
Sbjct: 83 DPFPLNTVLRIAA--GSPRPRVALELHRRRLALP-DTHTYPPLIQACARLLALREGECLH 139
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
++ K GF+ VFV NSL+H+Y A LF+
Sbjct: 140 AEAAKNGFVTLVFVQNSLVHLY-------GACGLFES----------------------- 169
Query: 195 HARQLFDRMPFR--DAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
A ++FD MP R + VSW +++ +A + + E + +F M+ +D PD +VS L+A
Sbjct: 170 -AHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTA 228
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES-SQEKNLFT 311
CA G L G+ +H Y+E + +S +S L+D YAKCG +N A IFE + + +
Sbjct: 229 CAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVS 288
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W +++VGLA +G G+ +L FS M ++ P +T++G L CSH GLVD+ + FD M+
Sbjct: 289 WTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMK 348
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
YG+S ++H GCM DLLGRAG +EEA + I MP+ + VW LLG C +H +E+
Sbjct: 349 EDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELG 408
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ A E +++L P G Y +L+++YA W DV +R+++ +++KN G SL++L
Sbjct: 409 KVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELR 466
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 227/431 (52%), Gaps = 32/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A IF+ +P + ++ +I + A+ L M+ + P+ +F +L+
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + + +H +++ G+ +++V+NSL+ +YC
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYC----------------------- 295
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
K G L AR+LF +P RD V+W +V GYAQ +EAI LF M IK
Sbjct: 296 --------KCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + S L++C+ L++GK IH+ + +D +L + LV YAKCG ++ A +
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLV 407
Query: 301 FESSQEKNLFTWNAMLVGL-AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
F E+N+ W A++ G A HG R +L YF +M + IKPD VT L C+H GL
Sbjct: 408 FNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGL 467
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V+E RK F M YG+ ++HY C DLLGRAG +EEA +I MP VW LL
Sbjct: 468 VEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALL 527
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H +VE E AAE+V+KL P+D G Y L+ +YA A R+ED K+R+ ++ + K
Sbjct: 528 SACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVK 587
Query: 480 NAGCSLIQLNG 490
G S I+++G
Sbjct: 588 EPGQSWIEVDG 598
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 182/414 (43%), Gaps = 46/414 (11%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
R ++++Q ++HA L G+ P L L ++ L+ A +F
Sbjct: 59 RLRSLEQGREVHAAILKSGI---QPNRYLENTLLSMYA----------KCGSLTDARRVF 105
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
++I + S+ +I A + L A + M+ PD +F LL A +
Sbjct: 106 DSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQ 165
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
L Q +H ++++ G + V SL+ +Y
Sbjct: 166 LGQKVHMEIVEAGLELEPRVGTSLVGMY-------------------------------A 194
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
K GD++ AR +FDR+P ++ V+W L+AGYAQ Q + A++L M ++ P+ I S
Sbjct: 195 KCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFAS 254
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L C LE GK +HRYI + + ++ L+ Y KCG + A ++F ++
Sbjct: 255 ILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRD 314
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+ TW AM+ G A G ++ F RM + IKPD +T L CS + E +++
Sbjct: 315 VVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ 374
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
++ G + ++ + + + G +++A + +M +V W+ ++ GC
Sbjct: 375 QLVHA-GYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSE-RNVVAWTAIITGC 426
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 35/309 (11%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
F LL+ C++L S + +H+ +LK G + ++ N+L+ +Y L DA+ +FD I
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
R++V SW ++ + ++ EA + +
Sbjct: 110 DRNIV-------------------------------SWTAMIEAFVAGNKNLEAFKCYET 138
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M KPD + VS L+A L+ G+ +H I + ++ + T LV YAKCG
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
I+ A IF+ EKN+ TW ++ G A G ++L M +A + P+ +T L G
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258
Query: 354 CSHAGLVDEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
C+ ++ +K+ ++S YG +EL + + + G +EEA ++ +P DV
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYG--RELWVVNSLITMYCKCGGLEEARKLFSDLPH-RDV 315
Query: 413 FVWSGLLGG 421
W+ ++ G
Sbjct: 316 VTWTAMVTG 324
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L CARL LEQG+ +H I + I+ + +L L+ YAKCG + A +F+S +++N+
Sbjct: 54 LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNI 113
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+W AM+ + + M A KPD VT + L ++ L+ +K+ E
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHME 173
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+ G+ E + + + + G I +A + ++P +V W+ L+ G G V+
Sbjct: 174 IVEA-GLELEPRVGTSLVGMYAKCGDISKARVIFDRLPE-KNVVTWTLLIAGYAQQGQVD 231
Query: 430 IA 431
+A
Sbjct: 232 VA 233
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 239/429 (55%), Gaps = 1/429 (0%)
Query: 63 YAL-SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
YA+ IF+ + YNTI+ + +V+ +M PD + + AC
Sbjct: 275 YAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAAC 334
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+QL S+ ++ H+ V + G + N+++ +Y + A ++FD + + VV+ N
Sbjct: 335 AQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWN 394
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
+LI G V+ G+L A ++F MP + VSW T++ Q+ EEAI L M + IK
Sbjct: 395 SLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKG 454
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D + +V SAC LG L+ K I+ YIE N I +D L T LVD +++CG A+ +F
Sbjct: 455 DRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVF 514
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
E+ +++++ W A + A+ G + ++ F M++ +K D + L SH G VD
Sbjct: 515 ENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVD 574
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ R+LF ME ++GVS ++ HYGCM DLLGRAGL+EEA +++K MP+ + +W L
Sbjct: 575 QGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAA 634
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CR H NVE A A E + +L PE G++ +L+++YA+A +W DV ++R + +K A
Sbjct: 635 CRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVA 694
Query: 482 GCSLIQLNG 490
G S I+++G
Sbjct: 695 GSSSIEVHG 703
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 228/485 (47%), Gaps = 67/485 (13%)
Query: 4 NNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISS-ASSPTTDPLS 62
N+ ++ CKT+ ++ Q+H + L KG+ ++ K I++ T + L+
Sbjct: 26 NSSLQTCKTLIELKQLHCNMLKKGVFNIN---------------KLIAACVQMGTHESLN 70
Query: 63 YALSIF--NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLR 119
YAL+ F + S ++ NT+IR + A+ ++ M V I PD ++FPFLL
Sbjct: 71 YALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLS 130
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
ACS++ + S +H V+K+G + D+FV NSL+H Y ++ +++FDE+L R+VVS
Sbjct: 131 ACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVS 190
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
W +L+ GY+ + +EA+ LF M+++ +
Sbjct: 191 -------------------------------WTSLINGYSVVNMAKEAVCLFFEMVEVGV 219
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ + +V A+SACA+L +LE GK + + ++ ++ + L+D Y KCG + E
Sbjct: 220 EPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVRE 279
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF+ +KNL +N ++ HGL LV M++ +PD VT+L + C+ G
Sbjct: 280 IFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGD 339
Query: 360 VDEARK-----LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ + + +E + +S + D+ + G E A ++ M V
Sbjct: 340 LSVGKSSHAYVFRNGLERLDNISNAI------IDMYMKCGKREAACKVFDSMS-NKTVVT 392
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV-YKVLADVYANADRWEDVVKIRRSLD 473
W+ L+ G G +E+ A + PE V + + A +E+ + + R +
Sbjct: 393 WNSLIAGLVRDGELEL----ALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQ 448
Query: 474 AGKIK 478
IK
Sbjct: 449 NQGIK 453
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 238/427 (55%), Gaps = 10/427 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP-DFYSFPFLLR 119
+ +A +F+ +P S+N +I + +A+ LF + IP D ++ ++
Sbjct: 214 IEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQE-----IPKRDVITWNTMMA 268
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+Q A + ++ + + N+++ Y +++A +LF + R+V+S
Sbjct: 269 GYAQCGDVENAVELFEKMPEQNLVS----WNTMIAGYVQNGSVKEAFKLFQIMPERNVIS 324
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N +I G+ + G + A +LF MP + VSW ++AGY+Q+ Q E A++LF M +D+
Sbjct: 325 WNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDM 384
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KP+ L ACA L LEQG H + + + D + LV YAKCG I A +
Sbjct: 385 KPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARK 444
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ ++++ + +AM+VG A++G + SL F +M +KPD VT +G L C HAGL
Sbjct: 445 VFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGL 504
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDE R+ FD M Y ++ ++HYGCM DLLGRAG +EA ++I KMP+ D +W LL
Sbjct: 505 VDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLL 564
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR H N+++ E A+H++ L P++ Y +L+++YA A RW+D+ +R + K+KK
Sbjct: 565 SACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKK 624
Query: 480 NAGCSLI 486
GCS I
Sbjct: 625 KLGCSWI 631
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 195/403 (48%), Gaps = 60/403 (14%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P + S+ +I A+ A+ F +M+ V I P+ ++F +L A
Sbjct: 116 LVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPA 175
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + H +++K GF +VFV N L+ +Y + A+ELFD++ RDVVS
Sbjct: 176 CTDL---EVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSW 232
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GYV+ G + A +LF +P RD ++W T++AGYAQ E A++LF M + ++
Sbjct: 233 NAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNL- 291
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
++ + ++ + G +++ + + + E N I ++ +S +A+ G + A++
Sbjct: 292 ---VSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISG-----FAQNGQVEEALK 343
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC----- 354
+F++ E N+ +WNAM+ G + +G +L F +M +KP+ T L C
Sbjct: 344 LFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAV 403
Query: 355 ------------------------------SHAGLVDEARKLFDEMESVYGVSKELKHYG 384
+ G +++ARK+FD M ++
Sbjct: 404 LEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRM-------RQQDSAS 456
Query: 385 CMADLLGRA--GLIEEALEMIKKMPMGG---DVFVWSGLLGGC 422
A ++G A G +E+LE+ ++M G D + G+L C
Sbjct: 457 LSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSAC 499
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 174/387 (44%), Gaps = 48/387 (12%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ + M I P ++ LL+ C S A+ +H+ +++ F C
Sbjct: 48 ALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFEC---------- 97
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+D+ N L+ YVK G L AR++FD MP ++ VSW +
Sbjct: 98 --------------------QDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAM 137
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI 274
+A YA+ + +EA+ F M D+ I+P++ S L AC +LE H I
Sbjct: 138 IAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGF 194
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
+ F+ GLVD YAK G I A E+F+ ++++ +WNAM+ G +GL +L F
Sbjct: 195 ESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQE 254
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
+ K D +T + G + G V+ A +LF++M + L + M + G
Sbjct: 255 I----PKRDVITWNTMMAGYAQCGDVENAVELFEKMP-----EQNLVSWNTMIAGYVQNG 305
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV-YKVLA 453
++EA ++ + MP +V W+ ++ G +G VE A + K PE V + +
Sbjct: 306 SVKEAFKLFQIMPE-RNVISWNAVISGFAQNGQVE----EALKLFKTMPECNVVSWNAMI 360
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKN 480
Y+ + E+ +K+ + +K N
Sbjct: 361 AGYSQNGQAENALKLFGQMQMVDMKPN 387
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 212/347 (61%), Gaps = 4/347 (1%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D NS++H Y V + AQ LF+ +L V+ +++ G+ +AGD+ AR++F+ MP
Sbjct: 76 DTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRVFEEMP 135
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RD VSW +++G + EA+ LF MM+ P+ +VS LSAC G LE GK
Sbjct: 136 ERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKW 195
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
+H ++E ++R D FL T LVD YAKCG + A+E+F + +N TWNAM+ GLAM+G
Sbjct: 196 VHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGY 255
Query: 325 GRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
+L F +M + + PD VT +G L+ CSHAG VD ++ F + YGV L+HY
Sbjct: 256 SAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHY 315
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKP 443
CM DLL R+G ++EA ++I +MPM DV VW LLGGCR+H NV++AE + +++
Sbjct: 316 ACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENV---ISEMEA 372
Query: 444 EDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
G + +L+++YA RW V +RR++ + I+K GCS ++++G
Sbjct: 373 TCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMDG 419
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 37/306 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P S+N +I P+ A+ LF M P+ + +L AC+
Sbjct: 127 ARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTG 186
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ L+ G +HV+ RLR +DE L L
Sbjct: 187 -----------AGALETG---------KWVHVFVEKKRLR-----WDEFL------GTAL 215
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPD 242
+D Y K G + A ++F + R+ +W ++ G A + +A+ +F M ++ + PD
Sbjct: 216 VDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPD 275
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYINTAIE- 299
+ V L AC+ G ++ GK H Y + V+ L +VD A+ G++ A +
Sbjct: 276 EVTFVGVLLACSHAGFVDAGKE-HFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKL 334
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
I E + ++ W A+L G +H +++ S M EA D V +
Sbjct: 335 ITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEM-EATCSGDHVLLSNLYAAVGRWNG 393
Query: 360 VDEARK 365
V++ R+
Sbjct: 394 VEDVRR 399
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
+ + Y G + A +F+ ++ ++N+M+ G A+ G + R+ E +
Sbjct: 49 NNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSG----DVGSAQRLFERVL 104
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
P VT + G AG V+ AR++F+EM VS GC+ + L
Sbjct: 105 APTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRL 154
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 215/340 (63%), Gaps = 5/340 (1%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
+V NS++ + L A+++FDE+ R++VS N ++ GY D+ AR+LFD MP
Sbjct: 225 NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMP 284
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIALVSALSACARLGELEQGK 263
+D VSW +++GYAQ+ + ++ ++LF M + +++P+ + +VS LSACA L LE+G+
Sbjct: 285 EKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGR 344
Query: 264 NIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
+H +I+ +++ +++ L L+D YAKCG + A++IF S KN+ WNA++ LAM
Sbjct: 345 WVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAM 404
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
+G + S+ F +M KP+ +T +G L CSH GLVDE R+ F M S GV E+K
Sbjct: 405 NGNAQDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVK 464
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE--HVM 439
HYGCM D+LGRAGL+EEA E+I+ MPM DV V+ LLG CR+H ++AE H +
Sbjct: 465 HYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEIHSL 524
Query: 440 KLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
L + G + +++D+YA A +W DV++ R+ + I+K
Sbjct: 525 NLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 204/402 (50%), Gaps = 22/402 (5%)
Query: 56 PTTDPLSYALSIFNNIPYPS---TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFY 112
P+ L+ AL + +PS TF +N +IRA +SP + FS + + PD +
Sbjct: 36 PSHPHLAAALCAVHFPLFPSSSATFLHNILIRASASSASPRLSFAAFSSLLRCGLVPDRF 95
Query: 113 SFPFLLRACSQLCSHS-LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
+ P LL + +L + +H+Q ++ GF+ DVFV+N+L+ +Y +E+F
Sbjct: 96 TLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGS 155
Query: 172 IL-YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
DVVS NT+I GYVK G++ A+++FD MP R+ VSW T+V GYA + + + A ++
Sbjct: 156 CAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREM 215
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS-TGLVDFYA 289
F M I + + S ++ AR G L + + +++ V + +S ++ Y+
Sbjct: 216 FDRM--PAIGRNVVTWNSMVTGFARHGLLPLARKM-----FDEMPVRNLVSWNAMLRGYS 268
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTIL 348
++ A E+F+ EK++ +W M+ G A G + +L F M E+ ++P+ VT++
Sbjct: 269 VNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMV 328
Query: 349 GALVGCSHAGLVDEAR---KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
L C++ ++E R D+ + V ++ E + D+ + G + A+++
Sbjct: 329 SVLSACANLTALEEGRWVHAFIDKHKMV--LNNEYNLGAALIDMYAKCGRTDIAVKIFNS 386
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL--KPED 445
+ +V W+ L+ ++GN + + A E + + KP D
Sbjct: 387 LDR-KNVSAWNALITRLAMNGNAQDSVDAFEQMKRTGEKPND 427
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 240/431 (55%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + P + ++ +I ++ AV F+ M + I PD + +L A
Sbjct: 187 LDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSA 246
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVS 179
C QL + ++H V + ++ +L+ +Y A+E+FD + R
Sbjct: 247 CGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQP 306
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N +IDGY K G + AR LFD+M D +++ +L+ GY + EA+ LF M +
Sbjct: 307 WNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGL 366
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
DN +V L+A A LG L QG+ +H IE + D +L T L+D Y KCG + A+
Sbjct: 367 GADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMV 426
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
F+ +++ TW+AM+ GLA +G+G+ +L +F M + VT + L CSH+ L
Sbjct: 427 AFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCL 486
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+DE R FDEM ++ + +++HYGCM DLLGR+GL++EA+++++ MPM + +W+ +L
Sbjct: 487 LDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASIL 546
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
CR+H NV++A+ AA H++KL+P + VY + ++Y ++ +WED KIRR ++ +KK
Sbjct: 547 SACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKK 606
Query: 480 NAGCSLIQLNG 490
AG S I + G
Sbjct: 607 TAGYSSIAVAG 617
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 233/468 (49%), Gaps = 52/468 (11%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSP--CHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
+++Q ++HA T G L P H+L ++ I+ P+ L YALS+F+
Sbjct: 11 SVRQATELHALVTTSGRLLHPPSAAHLLNSLTSCISPSDPLH---------LRYALSLFD 61
Query: 70 NIPYPSTFSYNTIIRAHTLFSS-PLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+P STF ++T +RA SS P ++L+ +M V +PPD ++F FL + C++ +H
Sbjct: 62 RMPC-STFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHV 120
Query: 129 L-AQTIHSQVLKLGFICDV-FVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L + +H+ + V + + ++H+Y DA+ FDE +DVV+ T+I G
Sbjct: 121 LLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISG 180
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
K G L AR+L R P R+ V+W L++GY+++ + EA+ F +M+ I PD + +
Sbjct: 181 LAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTV 240
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC--------------- 291
+ LSAC +L +L G ++H + ++ + L L+D YAKC
Sbjct: 241 IGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGR 300
Query: 292 -----------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
G+++ A +F+ ++ ++ T+N+++ G G R +L+ F++
Sbjct: 301 GRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTK 360
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M + D T++G L + G + + R L +E V +++ + D+ + G
Sbjct: 361 MRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRL-VERDVYLGTALLDMYMKCG 419
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
+EEA+ K+M + DV WS ++GG +G + +AA EH +K
Sbjct: 420 RVEEAMVAFKQMSV-RDVHTWSAMIGGLAFNG---MGKAALEHFFWMK 463
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 242/407 (59%), Gaps = 11/407 (2%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
S+NT+I + +A +F +M + S+ ++ + +A+ + ++
Sbjct: 26 SWNTVIGGYVKCGEMESAKRVFDEMPR----RNGVSWSTMVGGYAAAGELDVAREMFDRM 81
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+G +V NS++ + L A+++FDE+ R++VS N ++ GY D+ AR
Sbjct: 82 PAIGR--NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGAR 139
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIALVSALSACARL 256
+LFD MP +D VSW +++GYAQ+ + ++ ++LF M + +++P+ + +VS LSACA L
Sbjct: 140 ELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANL 199
Query: 257 GELEQGKNIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
LE+G+ +H +I+ +++ +++ L L+D YAKCG + A++IF S KN+ WNA
Sbjct: 200 TALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNA 259
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
++ LAM+G R S+ F +M KP+ +T +G L CSH GLVDE R+ F M S
Sbjct: 260 LITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTC 319
Query: 375 GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAA 434
GV E+KHYGCM D+LGRAGL+EEA E+I+ MPM DV V+ LLG CR+H ++AE
Sbjct: 320 GVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERV 379
Query: 435 AE--HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
H + L + G + +++D+YA A +W DV++ R+ + I+K
Sbjct: 380 QSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 426
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 152/299 (50%), Gaps = 21/299 (7%)
Query: 158 VFHRLRDA---QELFDEIL-YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
++ LRDA +E+F DVVS NT+I GYVK G++ A+++FD MP R+ VSW T
Sbjct: 1 MYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWST 60
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
+V GYA + + + A ++F M I + + S ++ AR G L + + ++
Sbjct: 61 MVGGYAAAGELDVAREMFDRM--PAIGRNVVTWNSMVTGFARHGLLPLARKM-----FDE 113
Query: 274 IRVDSFLS-TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
+ V + +S ++ Y+ ++ A E+F+ EK++ +W M+ G A G + +L F
Sbjct: 114 MPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELF 173
Query: 333 SRM-IEARIKPDGVTILGALVGCSHAGLVDEAR---KLFDEMESVYGVSKELKHYGCMAD 388
M E+ ++P+ VT++ L C++ ++E R D+ + V ++ E + D
Sbjct: 174 RAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMV--LNNEYNLGAALID 231
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL--KPED 445
+ + G + A+++ + +V W+ L+ ++GN + A E + + KP D
Sbjct: 232 MYAKCGRTDIAVKIFNSLDR-KNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPND 289
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 258/483 (53%), Gaps = 49/483 (10%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
++ + Q+HAH LT+ L S L+ I+ A P + ++YA S+F IP
Sbjct: 1 MRVLRQLHAHILTRPLPLSSFAFALSKIV-AFCALSPFGN--------INYARSVFAQIP 51
Query: 73 YPSTFSYNTIIRA----HTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQLCSH 127
+P+ FS+N++I+ HTL P + LF ++ P P+ ++ F+L+AC+ + +
Sbjct: 52 HPNIFSWNSLIKGYSQIHTLSKEP---IFLFKKLTETGYPVPNSFTLAFVLKACAIVTAF 108
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+HS VLK GF +FV SL ++ Y
Sbjct: 109 GEGLQVHSHVLKDGFGSSLFVQTSL-------------------------------VNFY 137
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
K ++ AR++F+ MP R+ V+W +++G+A+ +EA++LF M I+PD + LV
Sbjct: 138 GKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLV 197
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S +SACA G L+ G +H YIE + D LST LVD YAKCG I A ++F K
Sbjct: 198 SVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVK 257
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ W++M++G A HGL + ++ F +M+E + PD VT L L C+H GLV R+ +
Sbjct: 258 DTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFW 317
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
M +G+ ++HYGC DLL R+GL+EEA + M + + W LL GC+
Sbjct: 318 SLMLE-FGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKL 376
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+ + E A ++++L+P + Y +++++Y++ +WE + ++R+ + IK GCS I+
Sbjct: 377 LNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIE 436
Query: 488 LNG 490
++G
Sbjct: 437 VDG 439
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 230/427 (53%), Gaps = 32/427 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A F+ I P TFS+NTI+ A S+ + +F QM + Y++ +LR C+
Sbjct: 407 ATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTS 466
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H+ +LK G L D L
Sbjct: 467 LMNLRFGTQVHACILKSG-------------------------------LQNDTDVSRML 495
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y ++G A +F+++ RDA SW +++GYA++++ E+ ++ F +M+ +I+P +
Sbjct: 496 VDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSD 555
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
L +LS C+ + L G +H + + S +S LVD Y KCG I A +F
Sbjct: 556 ATLAVSLSVCSDMASLGSGLQLHSW-AIKSGWNSSVVSGALVDMYVKCGNIADAEMLFHE 614
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
S+ ++ WN ++ G + HG G +L F +M++ +PDG+T +G L CSHAGL++E
Sbjct: 615 SETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEG 674
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
RK F + S+YG++ ++HY CM D+L +AG + EA +I +MP+ D +W +LG CR
Sbjct: 675 RKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACR 734
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
IH N+EIAE AAE + +L+P D +L+++YA+ RW DV ++R L +KK GC
Sbjct: 735 IHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGC 794
Query: 484 SLIQLNG 490
S I++NG
Sbjct: 795 SWIEING 801
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 151/365 (41%), Gaps = 36/365 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F I P + +I A+ LF +M + + P+ Y F + S+
Sbjct: 306 AYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASR 365
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+L +++H+ ++K GF + + DA +
Sbjct: 366 TGDANLCRSVHAYIVKSGF--------------AMLKGVGDA-----------------I 394
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
++ YVK G + A FD + D SW T+++ + CE+ +++F M +
Sbjct: 395 LNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANK 454
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
VS L C L L G +H I + ++ D+ +S LVD YA+ G +A +FE
Sbjct: 455 YTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQ 514
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+E++ F+W ++ G A + YF M+ I+P T+ +L CS +
Sbjct: 515 LKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSG 574
Query: 364 RKLFD-EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+L ++S + S G + D+ + G I +A EM+ D W+ ++ G
Sbjct: 575 LQLHSWAIKSGWNSSVV---SGALVDMYVKCGNIADA-EMLFHESETRDQVAWNTIICGY 630
Query: 423 RIHGN 427
HG+
Sbjct: 631 SQHGH 635
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 8/256 (3%)
Query: 157 CVFHR-LRDAQELFDEIL----YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSW 211
C R LR QEL +L + D ++L++ Y K G L AR++FD MP RD V+W
Sbjct: 60 CAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAW 119
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH-RYIE 270
+++ + + ++A+ +F M I P+ L S L AC+ + +H + ++
Sbjct: 120 TAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVK 179
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
LN + D ++ + LV+ Y CG ++ A + E++ +WNA+L G A HG R ++
Sbjct: 180 LNGLD-DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMI 238
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
+++ + + T+ L C GL + + + G+ + C+ ++
Sbjct: 239 IIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIK-RGLETDNVLNSCLVEMY 297
Query: 391 GRAGLIEEALEMIKKM 406
R EEA E+ ++
Sbjct: 298 SRCLSAEEAYEVFIRI 313
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 31/286 (10%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P+ ++ +I AHT A+ +F++M I P+ ++ +L+ACS
Sbjct: 104 ARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSG 163
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+H QV+KL + D +V +SL+ Y L A+ + + R VS N L
Sbjct: 164 GSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNAL 223
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
++GY + GD + +++ V+ G ++ Y
Sbjct: 224 LNGYARHGDYRRVMIIIEKL-----VASGDEISKY------------------------- 253
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
L + L C LG + G+++H + + D+ L++ LV+ Y++C A E+F
Sbjct: 254 -TLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIR 312
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
E ++ +AM+ H + +L F +M +KP+ +G
Sbjct: 313 IDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVG 358
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 174/452 (38%), Gaps = 62/452 (13%)
Query: 2 TLNNFIKRCKT---IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
TL + +K C K HQ+H + L L ++ ++++ A T+ + +A +
Sbjct: 153 TLASVLKACSGGSHSKFTHQVHGQVVK--LNGLDDPYVGSSLVEAYTSCGELDAAET--- 207
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ +P S S+N ++ + +++ ++ Y+ P +L
Sbjct: 208 --------VLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVL 259
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+ C +L Q++H+ V+K G D + + L+ +Y +A E+F I DVV
Sbjct: 260 KCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVV 319
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
C+ +I FDR D EA+ LF M +
Sbjct: 320 HCSAMI-------------SCFDR------------------HDMAWEALDLFVKMSGMG 348
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+KP++ V +R G+ +++H YI + + + +++ Y K G + A
Sbjct: 349 VKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDAT 408
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS--- 355
F+ E + F+WN +L L F +M + T + L C+
Sbjct: 409 VTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLM 468
Query: 356 --HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
G A L +++ VS+ L D+ ++G A + +++ D F
Sbjct: 469 NLRFGTQVHACILKSGLQNDTDVSRML------VDMYAQSGCFTSACLVFEQLKE-RDAF 521
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPED 445
W+ ++ G + E AE E+ + E+
Sbjct: 522 SWTVIMSG---YAKTEEAEKVVEYFRSMLREN 550
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
+AL CA L +G+ +H + + + D+FL L++ Y KCG + A +F+ +
Sbjct: 55 AALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR 114
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
++ W AM+ G +L F+RM + I P+G T+ L CS ++
Sbjct: 115 DIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVH 174
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
++ + G+ + + G ++ A ++ +P DV W+ LL G HG+
Sbjct: 175 GQVVKLNGLDDPYVG-SSLVEAYTSCGELDAAETVLLGLPERSDV-SWNALLNGYARHGD 232
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 243/436 (55%), Gaps = 40/436 (9%)
Query: 60 PLSYALSIFNNI-PYPS--TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPF 116
PL YA+++ + + P+ F NT++R SP V L R +++P D +++P
Sbjct: 753 PLRYAVAVLSRLLPHGPLDPFPLNTVLRIAA--GSPRPRVALELHRRRLALP-DTHTYPP 809
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
L++AC++L + + +H++ K GF+ VFV NSL+H+Y
Sbjct: 810 LIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYG------------------- 850
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFR--DAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
+C G A ++FD MP R + VSW +++ +A + + E + +F M
Sbjct: 851 --AC----------GLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEM 898
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
+ +D PD +VS L+ACA G L G+ +H Y+E + +S +S L+D YAKCG +
Sbjct: 899 LGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSV 958
Query: 295 NTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
N A IFE + + +W +++VGLA +G G+ +L FS M ++ P +T++G L
Sbjct: 959 NDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYA 1018
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CSH GLVD+ + FD M+ YG+S ++H GCM DLLGRAG +EEA + I MP+ +
Sbjct: 1019 CSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAV 1078
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
VW LLG C +H +E+ + A E +++L P G Y +L+++YA W DV +R+++
Sbjct: 1079 VWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMV 1138
Query: 474 AGKIKKNAGCSLIQLN 489
+++KN G SL++L
Sbjct: 1139 KDRVRKNPGHSLVELR 1154
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 198/308 (64%)
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y K G++ AR +FD M +D ++W +++ YAQ++ + A QLF M D ++P+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ +VS LS CA G L+ GK H YI+ + VD L T L+D YAKCG I+ A +F
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ ++++ TWN M+ G MHG G +L F+ M +KP+ +T +GAL CSHAGLV E
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ LF++M +G+ +++HYGCM DLLGRAGL++EA +MI+ MP+ ++ +W +L C
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+IH N + E AA ++ L+P++ G +++++YA A+RW DV +R+++ IKK G
Sbjct: 513 KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG 572
Query: 483 CSLIQLNG 490
S I++NG
Sbjct: 573 MSSIEVNG 580
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 183/358 (51%), Gaps = 13/358 (3%)
Query: 90 SSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVL 149
S P A+ ++ MR + I D + P +L+ACSQ+ + + IH +K G + DVFV+
Sbjct: 88 SHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVV 147
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
N+LM +Y L A+ LFD++ RDVVS +T+I Y+ LF R V
Sbjct: 148 NALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYI---------TLFYGFSQRSIV 198
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW ++AGY + + EE +LF M++ ++ P++I ++S + +C +G ++ GK +H YI
Sbjct: 199 SWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYI 258
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
N + L+T LVD Y KCG I +A IF+S + K++ TW AM+ A +
Sbjct: 259 LRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAF 318
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F +M + ++P+ +T++ L C+ G +D K F GV ++ + D+
Sbjct: 319 QLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDM 377
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA--AAEHVMKLKPED 445
+ G I A + + + D+ W+ ++ G +HG E A + +KP D
Sbjct: 378 YAKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPND 434
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 33/261 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +IF+++ ++ +I A+ + A LF QMR + P+ + LL C+
Sbjct: 286 ARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAV 345
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + H+ + K G DV + +L
Sbjct: 346 NGALDMGKWFHAYIDKQGVEVDVILKTAL------------------------------- 374
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K GD++ A++LF RD +W ++AGY E+A++LF M L +KP++
Sbjct: 375 IDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPND 434
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
I + AL AC+ G + +GK + + + V G +VD + G ++ A ++ E
Sbjct: 435 ITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIE 494
Query: 303 SSQ-EKNLFTWNAMLVGLAMH 322
S N+ W AML +H
Sbjct: 495 SMPVTPNIAIWGAMLAACKIH 515
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 270/510 (52%), Gaps = 54/510 (10%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTIL------YAITTFKPISSASSPTTDPLSYAL- 65
+++ ++HA L G L P +L +L YA SASSP + PL L
Sbjct: 1 MEEAKRLHARLLRGGARRLQP--LLLRVLAAGDHRYAALLLASYPSASSPHSAPLHDRLL 58
Query: 66 -SIFNNIPYPSTFSYNTIIRAHTL-FSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
++ N++P PS T RAH L +PL+ L S P PF
Sbjct: 59 HALANSLPRPSPLLLPTFARAHRLRLLTPLSFTFLLSS------PAAASHAPF------A 106
Query: 124 LCSHSLAQTIHSQVLKLGFIC--DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
LCSH+L ++K G D F+ ++L+ Y L +A+ +FDE+ RD N
Sbjct: 107 LCSHAL-------LVKSGHFASGDPFLGSALVSFYAKSRLLDEARRVFDEMPRRDTAVYN 159
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD-LDIK 240
L+ Y + G + A +LF M R+ VSW +V+GYAQ+ + E A++ F M + ++
Sbjct: 160 ALLSAYARCGLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQ 219
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + + S L ACA +G +E G + Y + F++ L++ YAKCG I A ++
Sbjct: 220 PNELTVSSVLPACAAVGAMELGTKVEEYARGKGHLGNVFVTNALLEMYAKCGSIQRAWQV 279
Query: 301 FES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI------------------- 340
F+ ++L +WN M++ A+HGL +L F ++ RI
Sbjct: 280 FQGIGHRRDLCSWNTMIMAFAVHGLWMEALALFHKL-RVRISCSNSLVYFFSIPTHMTGV 338
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
KPDG+T +G ++ C+H GLVDE + +F+ ME+ + ++ ++HYGCM DLLGRAGL++EA
Sbjct: 339 KPDGITFVGVILACTHGGLVDEGKLIFNSMEADFSINPRIEHYGCMVDLLGRAGLLKEAY 398
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANAD 460
MI MP D +W LLG C HGN+E+AE A + +M L+P++ +L+++YA++
Sbjct: 399 SMIISMPAEPDAVIWGALLGACSFHGNIELAETAVDKLMYLEPQNTANLVILSNIYASSG 458
Query: 461 RWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+W+ V ++ + L KK+AG S I+L+G
Sbjct: 459 KWDGVAQVWKLLKEKDHKKSAGYSFIELDG 488
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 223/426 (52%), Gaps = 32/426 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL+ FN + ++N++I + P NA+ +F ++R +I PD + ++ AC+
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L IH ++KLGF D V N+L
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVKNAL------------------------------- 572
Query: 184 IDGYVKAGDLAHARQLFDRMPF-RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
ID Y K G L A LF++ F +D V+W ++A Y Q+ +EAI F M + P+
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPN 632
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++ VS L A A L +G H I ++ + L+D YAKCG ++ + ++F
Sbjct: 633 SVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFN 692
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K+ +WNAML G A+HG G ++ FS M E++++ D V+ + L C HAGLV+E
Sbjct: 693 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEE 752
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
RK+F M Y + +L+HY CM DLLGRAGL +E L IK MP+ D VW LLG C
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 812
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R+H NV++ E A +H++KL+P + + VL+ +YA + RW D K R ++ +KK G
Sbjct: 813 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872
Query: 483 CSLIQL 488
CS ++L
Sbjct: 873 CSWVEL 878
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 202/447 (45%), Gaps = 65/447 (14%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ CK + + QIHA + G H +T ++ + F A
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGF---KHHHSITHLINLYSLFHKCD-----------LAR 83
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
S+F++ P PS +N++IRA+T A+ ++ M + PD Y+F F+L+AC+
Sbjct: 84 SVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGAL 143
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ H ++ + G L RDV L+D
Sbjct: 144 NLQEGVWFHGEIDRRG-------------------------------LERDVFIGAGLVD 172
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y K GDL AR++FD+MP RD V+W ++AG +QS+ EA+ F +M + ++P +++
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVD--SFLSTGLVDFYAKCGYINTAIEIFES 303
L++ +L +E ++IH Y+ R D S +S GL+D Y+KCG ++ A +F+
Sbjct: 233 LLNLFPGICKLSNIELCRSIHGYV----FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQ 288
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+++ +W M+ G A +G L F +M ++ + V+ + A + + +++
Sbjct: 289 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Query: 364 RK-----LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
++ L ++S V+ L + + G E+A ++ + G D+ WS +
Sbjct: 349 KEIHGCALQQRIDSDILVATPL------MVMYAKCGETEKAKQLFWGL-QGRDLVAWSAI 401
Query: 419 LGGCRIHGNVEIAEAAAEHV--MKLKP 443
+ G E A + + + K+KP
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKP 428
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 161/366 (43%), Gaps = 45/366 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P ++N +I + P AV F M+ V + P S L
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+L + L ++IH V + F V
Sbjct: 240 ICKLSNIELCRSIHGYVFRRDFSSAV---------------------------------S 266
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LID Y K GD+ AR++FD+M +D VSWGT++AGYA + E ++LF M +++
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ ++ VSA A A +LE+GK IH +I D ++T L+ YAKCG A ++
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F Q ++L W+A++ L G +L F M ++KP+ VT++ L C+ L+
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 361 DEARKLF-----DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+ + +M+S +L + + + G AL +M D+ W
Sbjct: 447 KLGKSIHCFTVKADMDS------DLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTW 499
Query: 416 SGLLGG 421
+ L+ G
Sbjct: 500 NSLING 505
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 6/269 (2%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
D++ L+ Y K G+ A+QLF + RD V+W ++A Q+ EEA+ LF M
Sbjct: 363 DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGY 293
+ +KP+ + L+S L ACA L L+ GK+IH + + +DS LSTG LV YAKCG+
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTV--KADMDSDLSTGTALVSMYAKCGF 480
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
A+ F +++ TWN+++ G A G ++ F ++ + I PD T++G +
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C+ +D+ + + + G + + D+ + G + A + K D
Sbjct: 541 CALLNDLDQGTCIHGLIVKL-GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV 599
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
W+ ++ +G+ + A ++ H M+L+
Sbjct: 600 TWNVIIAAYMQNGHAKEA-ISSFHQMRLE 627
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 152/357 (42%), Gaps = 34/357 (9%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
+++ II A P A+ LF +M+ + P+ + +L AC+ L L ++IH
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+K D+ +L+ +Y A F+ + RD+V+ N+LI+GY + GD
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGD----- 511
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
P+ AI +F + I PD +V + ACA L
Sbjct: 512 ------PY--------------------NAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAML 316
+L+QG IH I D + L+D YAKCG + +A +F + K+ TWN ++
Sbjct: 546 DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII 605
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
+G + ++ F +M P+ VT + L ++ E + + +
Sbjct: 606 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
S L + D+ + G ++ + ++ +M D W+ +L G +HG+ + A A
Sbjct: 666 SNTLVG-NSLIDMYAKCGQLDYSEKLFNEMDH-KDTVSWNAMLSGYAVHGHGDRAIA 720
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 135/321 (42%), Gaps = 49/321 (15%)
Query: 22 HFLTKGLLFLSPCHILTTI--LYAITTFKPISSASSPTTDPLSYALSIFNNIPY-PSTFS 78
H L L F S CH+ + +YA S P+ + L FN + +
Sbjct: 554 HGLIVKLGFESDCHVKNALIDMYA-------KCGSLPSAEFL------FNKTDFTKDEVT 600
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N II A+ A+ F QMR + P+ +F +L A + L + H+ ++
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
++GF+ + V NSL+ +Y +L +++LF+E+ ++D VS N ++ GY G
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHG------- 713
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+ AI LF M + ++ D+++ VS LSAC G
Sbjct: 714 ------------------------HGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGL 749
Query: 259 LEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAML 316
+E+G+ I H + I+ D +VD + G + + + E + W A+L
Sbjct: 750 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809
Query: 317 VGLAMHGLGRLSLVYFSRMIE 337
MH +L V +++
Sbjct: 810 GSCRMHSNVKLGEVALDHLVK 830
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 238/432 (55%), Gaps = 36/432 (8%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F + + S+ + I A+ +A+ LF +M++ + PD Y+ ++ A
Sbjct: 622 LNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 681
Query: 121 CSQLCSHSL--AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
C+ CS SL + +HS V+K G ++ V N+L
Sbjct: 682 CA--CSSSLDKGRDVHSYVIKNGMGSNLPVTNAL-------------------------- 713
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
I+ Y K G + AR +F ++P +D VSW T++ GY+Q+ EA++LF +M
Sbjct: 714 -----INMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-Q 767
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
KPD+I + L ACA L L++G+ IH +I D ++ LVD YAKCG + A
Sbjct: 768 FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQ 827
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ +K+L +W M+ G MHG G ++ F+ M A I+PD + L CSH+G
Sbjct: 828 LLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSG 887
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L++E K F+ M + GV +L+HY C+ DLL R G + +A + I+ MP+ D +W L
Sbjct: 888 LLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVL 947
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L GCRIH +V++AE AEH+ +L+P++ Y VLA+VYA A++WE+V K+R+ + K
Sbjct: 948 LSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFK 1007
Query: 479 KNAGCSLIQLNG 490
+N GCS I++ G
Sbjct: 1008 QNPGCSWIEVGG 1019
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 199/443 (44%), Gaps = 51/443 (11%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+K+ ++H + L G F S ++ +++ A F + SA + +F+ +
Sbjct: 486 VKECKRVHGYVLKLG--FGSNTAVVNSLIAAYFKFGGVESAHN-----------LFDELS 532
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
P S+N++I + N + +F QM + + D + +L A + + + SL +
Sbjct: 533 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRA 592
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H +K F +VV NTL+D Y K G+
Sbjct: 593 LHGFGVKACF-------------------------------SEEVVFSNTLLDMYSKCGN 621
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
L A ++F +M VSW + +A Y + +AI LF M ++PD + S + A
Sbjct: 622 LNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 681
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA L++G+++H Y+ N + + ++ L++ YAKCG + A +F K++ +W
Sbjct: 682 CACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSW 741
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
N M+ G + + L +L F M + + KPD +T+ L C+ +D+ R++ +
Sbjct: 742 NTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILR 800
Query: 373 VYGVSKELKHYGC-MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH--GNVE 429
G +L H C + D+ + GL+ A + +P D+ W+ ++ G +H GN
Sbjct: 801 -RGYFSDL-HVACALVDMYAKCGLLVLAQLLFDMIPK-KDLISWTVMIAGYGMHGFGNEA 857
Query: 430 IAEAAAEHVMKLKPEDGGVYKVL 452
I+ + ++P++ +L
Sbjct: 858 ISTFNEMRIAGIEPDESSFSVIL 880
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 163/355 (45%), Gaps = 33/355 (9%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF+ I F +N ++ + + +V LF +M+ + + + Y+F +L+ + L
Sbjct: 426 IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 485
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H VLKLGF + V+NSL+ Y F + A LFDE+ DVVS N++I+G
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 545
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
V V G++ + +++F M+ L ++ D L
Sbjct: 546 CV--------------------------VNGFSGN-----GLEIFIQMLILGVEVDLTTL 574
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS L A A +G L G+ +H + + S L+D Y+KCG +N A E+F +
Sbjct: 575 VSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 634
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+ +W + + GL ++ F M ++PD T+ + C+ + +D+ R +
Sbjct: 635 TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 694
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ G+ L + ++ + G +EEA + K+P+ D+ W+ ++GG
Sbjct: 695 HSYVIK-NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV-KDIVSWNTMIGG 747
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 167/401 (41%), Gaps = 57/401 (14%)
Query: 43 AITTFKPISSASS--PTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
++ TF +SS S PT+ P + N + S+N I F P +L S
Sbjct: 269 SMFTFTTLSSVSKTIPTSSPYHTHKTTSNY----TKKSHNRFI----FFKQPRRTCLLHS 320
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLM------- 153
TV + P F + +HS+ Q ++++ K + D+ L+
Sbjct: 321 ---TVCVSPSFTN-----------TTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYE 366
Query: 154 ---HVYC-VFHRLRDAQELFDEILYRDVVSCN----------TLIDGYVKAGDLAHARQL 199
+ YC V + + L D V+ N L+ YV GDL R++
Sbjct: 367 LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKI 426
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
FD++ W L++ YA+ E++ LF M L + + L A LG++
Sbjct: 427 FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKV 486
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
++ K +H Y+ ++ + L+ Y K G + +A +F+ E ++ +WN+M+ G
Sbjct: 487 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 546
Query: 320 AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV--- 376
++G L F +M+ ++ D T++ LV ++ G + R L +GV
Sbjct: 547 VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHG-----FGVKAC 601
Query: 377 -SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
S+E+ + D+ + G + A E+ KM GD + S
Sbjct: 602 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKM---GDTTIVS 639
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 98/251 (39%), Gaps = 20/251 (7%)
Query: 194 AHARQLFDRMPFRDAVSWGTLVAG-------YAQSDQCEEAIQLFCNMMDLD------IK 240
+H R +F + P R + T+ ++ + I FC M DL K
Sbjct: 302 SHNRFIFFKQPRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTK 361
Query: 241 PDNIAL-----VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+ L S L CA LE GK +H I N I +D L LV Y CG +
Sbjct: 362 SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLV 421
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
+IF+ +F WN ++ A G R S+ F +M + + + T L +
Sbjct: 422 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 481
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
G V E +++ + + G + + G +E A + ++ DV W
Sbjct: 482 ALGKVKECKRVHGYVLKL-GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE-PDVVSW 539
Query: 416 SGLLGGCRIHG 426
+ ++ GC ++G
Sbjct: 540 NSMINGCVVNG 550
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 228/420 (54%), Gaps = 30/420 (7%)
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
+P+PST S+ +I A+ L A+ + + + PD ++ +L AC+++
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ + + + +E + V +D YVK
Sbjct: 61 EAVWAAARQ------------------------------EEGVAESVFVATAALDLYVKC 90
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G++ AR +FD M RDAV+WG +V GYA + EA+ LF M KPD +V AL
Sbjct: 91 GEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGAL 150
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
SAC RLG L+ G+ + +++ + L T L+D YAKCG + A +F+ E+++
Sbjct: 151 SACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDII 210
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
WNAM++GL M G +++ +M ++ +K + T +G L C+H GLV++ R+ F M
Sbjct: 211 VWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNM 270
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
VY +S ++HYGCM DL RAGL+EEA ++I MPM + VW LLGGC+IH N ++
Sbjct: 271 THVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADL 330
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
AE A + +++L+P + G Y +L+++Y+N+ RWED K+R + A I+K S ++L+G
Sbjct: 331 AEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDG 390
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 258/486 (53%), Gaps = 52/486 (10%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTT--ILYAITTFKPISSASSPTTDPLSYALSI 67
++ + Q+HA L G+ P H L +L+ + + + PL YA+++
Sbjct: 29 APSLATVKQLHARALRAGV---PPAHPLLAKHLLFHLASLR---------APPLRYAVAV 76
Query: 68 FNNI-PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+ P P FS NT++R S P A+ L ++ PPD +++P LL+AC++L S
Sbjct: 77 LTRVLPDPDPFSLNTVLRIAASSSRPSLALALHARRLA---PPDTHTYPPLLQACARLLS 133
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IH++ K G VFV NSL+H+Y A LF+
Sbjct: 134 LRHGERIHAEAAKNGLATLVFVKNSLVHLY-------GACGLFES--------------- 171
Query: 187 YVKAGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
A ++FD +P R+ VSW +++ G+A + + E + +F M+D++ PD
Sbjct: 172 ---------AHRVFDEIPVGERNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGF 222
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES- 303
+VS L+A A +G L G+ +H Y+ + +S + L+D YAKCG + A +FE
Sbjct: 223 TVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVFEEM 282
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+ + +W +++VGLA++G G+ +L F M ++ P +T++G L CSH GLVD+
Sbjct: 283 GARRTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCGLVDDG 342
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
F+ M+ Y ++ ++H GCM DLLGRAG ++EA + I MP+ + VW LLG C
Sbjct: 343 FMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTLLGACA 402
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+H +E+ EAA +++L P G Y +L+++YA RW DV +R+++ ++KN G
Sbjct: 403 MHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVRKNPGR 462
Query: 484 SLIQLN 489
SL++L
Sbjct: 463 SLVELR 468
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 232/429 (54%), Gaps = 13/429 (3%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ + S+N II AH + LF M I PD ++F +L+A
Sbjct: 391 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKA 450
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ S IHS ++K G + V SL+ +Y + +A+++ R VS
Sbjct: 451 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVS- 508
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
G + ++ ++ VSW ++++GY +Q E+A LF MM++ I
Sbjct: 509 ----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 558
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + L CA L GK IH + +++ D ++S+ LVD Y+KCG ++ + +
Sbjct: 559 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLM 618
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE S ++ TWNAM+ G A HG G ++ F RMI IKP+ VT + L C+H GL+
Sbjct: 619 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 678
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F M+ YG+ +L HY M D+LG++G ++ ALE+I++MP D +W LLG
Sbjct: 679 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 738
Query: 421 GCRIH-GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C IH NVE+AE A +++L P+D Y +L++VYA+A WE V +RR++ K+KK
Sbjct: 739 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 798
Query: 480 NAGCSLIQL 488
GCS ++L
Sbjct: 799 EPGCSWVEL 807
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 179/433 (41%), Gaps = 63/433 (14%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS-----PTTDPLS-------YAL 65
Q HAH + G F +L +L T + SAS P D +S YA
Sbjct: 27 QAHAHMILSG--FRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMINGYAK 84
Query: 66 S--------IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
S FN +P S+N+++ + L ++ +F M D +F +
Sbjct: 85 SNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAII 144
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ CS L SL IH V+++G CD DV
Sbjct: 145 LKVCSCLEDTSLGMQIHGVVVRVG--CDT-----------------------------DV 173
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V+ + L+D Y K + ++F +P +++VSW ++AG Q++ A++ F M +
Sbjct: 174 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 233
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ S L +CA L EL G +H + + D + T +D YAKC + A
Sbjct: 234 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 293
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+ S+ N ++NAM+ G + G +L+ F R++ + + D +++ G C+
Sbjct: 294 QILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV 353
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIEEALEMIKKMPMGGDVF 413
+ E +++D + L C+A D+ G+ + EA + +M D
Sbjct: 354 KGLSEGLQIYD-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAV 407
Query: 414 VWSGLLGGCRIHG 426
W+ ++ +G
Sbjct: 408 SWNAIIAAHEQNG 420
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ + L + H+ ++ GF FVLN L+ VY A +FD + RDVVS
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I+GY K+ ++ A F+ MP RD VSW ++++GY Q+ + ++I++F +M +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D L C+ L + G IH + D ++ L+D YAK ++ +
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
F+ EKN +W+A++ G + L L+L +F M
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 230
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 181/453 (39%), Gaps = 80/453 (17%)
Query: 7 IKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ C + ++ Q+HAH L T +YA D +
Sbjct: 246 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA-------------KCDNMQD 292
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + SYN +I ++ A++LF ++ + + D S + RAC+
Sbjct: 293 AQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 352
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S I+ +K DV V N+ + +Y L +A +FDE+ RD
Sbjct: 353 VKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD------- 405
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
AVSW ++A + Q+ + E + LF +M+ I+PD
Sbjct: 406 ------------------------AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 441
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA------ 297
S L AC G L G IH I + + +S + L+D Y+KCG I A
Sbjct: 442 FTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 500
Query: 298 ----------IEIFESSQEKNL----FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+E E K L +WN+++ G M + + F+RM+E I PD
Sbjct: 501 FFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 560
Query: 344 GVTILGALVGCSH---AGLVDE--ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEE 398
T L C++ AGL + A+ + E++S +S L D+ + G + +
Sbjct: 561 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTL------VDMYSKCGDLHD 614
Query: 399 ALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ M +K + D W+ ++ G HG E A
Sbjct: 615 SRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 646
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 145/341 (42%), Gaps = 43/341 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+L +F IP ++ S++ II + A+ F +M+ V+ + +LR+C+
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L L +H+ LK F D V +
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTAT------------------------------- 280
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K ++ A+ LFD+ + S+ ++ GY+Q + +A+ LF +M + D
Sbjct: 281 LDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 340
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I+L ACA + L +G I+ + + +D ++ +D Y KC + A +F+
Sbjct: 341 ISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 400
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA----GL 359
+ ++ +WNA++ +G G +L F M+ +RI+PD T L C+ G+
Sbjct: 401 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSLGYGM 460
Query: 360 VDEARKLFDEMESVYGVSKELKHYGC-MADLLGRAGLIEEA 399
+ + M S V GC + D+ + G+IEEA
Sbjct: 461 EIHSSIVKSGMASNSSV-------GCSLIDMYSKCGMIEEA 494
>gi|125541717|gb|EAY88112.1| hypothetical protein OsI_09550 [Oryza sativa Indica Group]
Length = 500
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 253/440 (57%), Gaps = 17/440 (3%)
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV--SIP--PDFYSFPFLLRAC 121
S+ + +P++ + + +H+ SPL A+ LF ++R + + P P+ Y+F FLL A
Sbjct: 33 SLLADRFFPNSLLRSLLPPSHS--HSPLRALRLFPRLRRIIATNPFFPNAYTFSFLLTAS 90
Query: 122 SQLCS--HS-----LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD-EIL 173
+ L H+ L +++H+ + + +V N L+H Y L A+ +FD +
Sbjct: 91 ASLAPLPHAASPRVLVESLHALAILVACDAHAYVSNGLIHAYASSALLCSARRVFDVNVS 150
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
RDV S +L+ Y +A L HAR LFD MP + ++W +++ Y + EA+ +F
Sbjct: 151 CRDVCSWTSLLTAYGRAALLHHARALFDAMPHKTTIAWAAILSAYVGAGSFAEAVDVFQE 210
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI--ELNQIRVDSFLSTGLVDFYAKC 291
M+ ++P+ ++S L+AC LG LEQG+ +H ++ + D ++T LVD YAKC
Sbjct: 211 MLRARVRPNRAVILSVLAACGALGALEQGRWVHAHLVAAHGAMAKDGMVATALVDMYAKC 270
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G + TA ++F E+++F + AM+ GL+ HG ++ F RM E ++P+ VT + L
Sbjct: 271 GSLETARQVFSGMAERDVFAYTAMVSGLSDHGRCVEAIELFGRMQEEGVRPNEVTFICVL 330
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
C AGLV AR++ M +V+G+ ++HYG M D+LGRAG++EEALE++++MPM D
Sbjct: 331 SACGRAGLVGRAREILGSMSAVHGMEAGVEHYGSMVDVLGRAGMVEEALEVVRRMPMRPD 390
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPED-GGVYKVLADVYANADRWEDVVKIRR 470
+V LL C G+ E E A + +L +D GV L+++YA +WE+VV +RR
Sbjct: 391 SYVLGALLNACVARGDTEGGEEVAAMMAELGLDDRSGVQVQLSNLYAGRGKWEEVVGVRR 450
Query: 471 SLDAGKIKKNAGCSLIQLNG 490
++ K+ K GCS+++++G
Sbjct: 451 GMEERKVVKVPGCSMVEVDG 470
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 34/243 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L +A ++F+ +P+ +T ++ I+ A+ S AV +F +M + P+ +L A
Sbjct: 170 LHHARALFDAMPHKTTIAWAAILSAYVGAGSFAEAVDVFQEMLRARVRPNRAVILSVLAA 229
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C L + + +H+ ++ + +D +
Sbjct: 230 CGALGALEQGRWVHAHLVAA-----------------------------HGAMAKDGMVA 260
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+D Y K G L ARQ+F M RD ++ +V+G + +C EAI+LF M + ++
Sbjct: 261 TALVDMYAKCGSLETARQVFSGMAERDVFAYTAMVSGLSDHGRCVEAIELFGRMQEEGVR 320
Query: 241 PDNIALVSALSACARLGELEQGKNI---HRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
P+ + + LSAC R G + + + I + + V+ + S +VD + G + A
Sbjct: 321 PNEVTFICVLSACGRAGLVGRAREILGSMSAVHGMEAGVEHYGS--MVDVLGRAGMVEEA 378
Query: 298 IEI 300
+E+
Sbjct: 379 LEV 381
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 251/449 (55%), Gaps = 8/449 (1%)
Query: 44 ITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR 103
I T+ + + + D L A F+ +P S S+N + A+ P A+ LF QM
Sbjct: 192 IITWTSMVTGYAKMGD-LESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 104 TVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR 163
I PD ++ + +CS + +LA +I + + + + FV +L+ ++ F L
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310
Query: 164 DAQELFDEI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
A+ +FDE+ R+ V+ N +I Y + G L+ AR+LFD MP RD VSW +++AGYAQ+
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNG 370
Query: 223 QCEEAIQLFCNMMD-LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
+ +I+LF M+ +DI+PD + + S LSAC +G L+ + + I++
Sbjct: 371 ESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGF 430
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK 341
L+ Y+KCG + A IF++ +++ ++N ++ G A +G G+ ++ M E I+
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
PD VT +G L CSHAGL++E + +F +++ + HY CM DLLGRAG ++EA
Sbjct: 491 PDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKM 545
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADR 461
+I+ MPM V+ LL RIH V + E AA + +L+P++ G Y +L+++YA+ R
Sbjct: 546 LIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGR 605
Query: 462 WEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
WEDV ++R + G +KK+ G S ++ G
Sbjct: 606 WEDVKRVREMMKKGGLKKSVGMSWVEYKG 634
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 189/414 (45%), Gaps = 81/414 (19%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+ I+Q+ Q H H + L S + ++ +L T + P +Y SIF
Sbjct: 10 KISNIRQLRQFHGHLVHNSLH--SHNYWVSLLLINCTRLH-----AHP-----AYVDSIF 57
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ P P Y+ +++ ++ + V LF ++++ P + + +L++ +
Sbjct: 58 TSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKS---- 113
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE----------------- 171
H+ VLKLG I D F+ N+++ +Y ++ A+ LF++
Sbjct: 114 -GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 172 ---------ILY-----RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
+L+ R++++ +++ GY K GDL AR+ FD MP R VSW + +
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
YAQ + +EA+ LF M++ I PD+ V +S+C+ +G+ +I R I+ I ++
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 278 SFLSTGLVDFYAK--------------------------------CGYINTAIEIFESSQ 305
SF+ T L+D +AK G ++ A E+F++
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSHAG 358
++++ +WN+M+ G A +G +S+ F MI I+PD VTI L C H G
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIG 406
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 245/443 (55%), Gaps = 14/443 (3%)
Query: 59 DPLSYALSIFNNIPYPST--FSYNTIIRA---HTLFSSPLNAVVLFSQMRTVS--IPPDF 111
D AL +F+ +P + SYNT++ + H + L V ++ R + + D
Sbjct: 117 DTFPDALHLFDTMPADARNLVSYNTLMSSLVHHGRQAEALRVVARLARDRFLGPGLAMDR 176
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
++ + AC+ + + + +H V+ G V + N++++ Y R+ +A+ LFD+
Sbjct: 177 FTVVSVATACAGIRAARPLREMHGAVVVSGMELTVIMANAMVNAYSKAWRVEEARHLFDQ 236
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
I RD V+ ++I GY + L A Q+FD MP +D V+W L++G+ Q+ + + A++LF
Sbjct: 237 ISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGEEDTALELF 296
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS---FLSTGLVDFY 288
M+ + P ALVS L ACA+LG + +GK +H I I D F+ LVD Y
Sbjct: 297 ERMLAEGVSPTTFALVSVLGACAKLGLVTRGKELHCSILRRSIGSDPFNIFIHNALVDMY 356
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+KCG + A+ +F E++ +WN+M+ G + +GLG+ SL F M+ A ++P VT L
Sbjct: 357 SKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFL 416
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L CSH+GLV R + + ME +GV +HY D LGR +EEA+E IK +P
Sbjct: 417 AVLTACSHSGLVSNGRLILESMED-HGVEPRAEHYAAFIDALGRNRQLEEAIEFIKDLPS 475
Query: 409 ---GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
G W LLG CR+HGN+E+AE AE + KL+P + G Y +L+++YA A +W+D
Sbjct: 476 RIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFKLEPGNSGRYVMLSNIYAAAGQWDDA 535
Query: 466 VKIRRSLDAGKIKKNAGCSLIQL 488
++R + +KK+ S I++
Sbjct: 536 RRVRGLMKEKGLKKDQAYSWIEV 558
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 148/349 (42%), Gaps = 42/349 (12%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
P L RA S L + +H++++K + N L+ +Y A FD++
Sbjct: 39 IPLLERAISTGDVLRLGRAVHARLVKTALTSHTLLSNRLVALYSRLPSSAAAVAAFDDLP 98
Query: 174 YRDVVSCNTLIDGYVKAGD-LAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAIQL 230
+++ S NTL+ ++ D A LFD MP R+ VS+ TL++ + EA+++
Sbjct: 99 HKNAHSYNTLLAALLRRPDTFPDALHLFDTMPADARNLVSYNTLMSSLVHHGRQAEALRV 158
Query: 231 FCNMM-DLDIKP----DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
+ D + P D +VS +ACA + + +H + ++ + + ++ +V
Sbjct: 159 VARLARDRFLGPGLAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGMELTVIMANAMV 218
Query: 286 DFYAKC--------------------------GY-----INTAIEIFESSQEKNLFTWNA 314
+ Y+K GY ++ A+++F+ +K+ W A
Sbjct: 219 NAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPDKDRVAWTA 278
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM--ES 372
++ G +G +L F RM+ + P ++ L C+ GLV ++L + S
Sbjct: 279 LISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACAKLGLVTRGKELHCSILRRS 338
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ + + + D+ + G + A+ + +MP D W+ ++ G
Sbjct: 339 IGSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMP-ERDFISWNSMVTG 386
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 267/555 (48%), Gaps = 81/555 (14%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+FI+RC ++ QIHA L T + + K + TD + Y
Sbjct: 89 DFIQRCNDLRSFKQIHAQLLRS-----------TLVDNDLVVTKAANFFGKHVTD-IRYP 136
Query: 65 LSIFNNIPYP-STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+ + S+F N II + + P A+ ++ + PD Y+ P +L++C++
Sbjct: 137 CNFLKQFDWSFSSFPCNLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCAR 196
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + IH+ +K CD+FV NS +HVY + A ++FD + RDVVS L
Sbjct: 197 FSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGL 256
Query: 184 IDGYVKAGDLAHARQLFDRMPF------------------------------------RD 207
I GY+KAG A LF RM ++
Sbjct: 257 ISGYMKAGLFNDAVALFLRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKE 316
Query: 208 AVSWGTLVAGYAQSDQCEEAIQLF----------------------CNMMDLDI------ 239
V TL+ Y + + +A +LF C LD+
Sbjct: 317 LVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLG 376
Query: 240 ---KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+PD + L S LSACA LG L+ G+ +H YI+ ++I+ D + T L+D YAKCG I
Sbjct: 377 SGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEM 436
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A ++F KN+ TWNA + GLA++G G+ +L F ++E+ +P+ +T L C H
Sbjct: 437 AQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCH 496
Query: 357 AGLVDEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+GLVDE R F +M S Y +S L+HYGCM DLL RA L+EEA+E+I KMPM DV +
Sbjct: 497 SGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQII 556
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL +GNVE+ + V + ++ GVY +L++ YAN +W +V +RR +
Sbjct: 557 GALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEK 616
Query: 476 KIKKNAGCSLIQLNG 490
I K G SLI+++G
Sbjct: 617 GISKAPGSSLIRVDG 631
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 241/467 (51%), Gaps = 51/467 (10%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ LS A +FN++P + SYN II + L + VS+ F
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLG-------LDEVSLSGAF------- 369
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
RAC+ + +H +K ++ V N+++ +Y L +A +F+E++ RD V
Sbjct: 370 RACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAV 429
Query: 179 SCNT-------------------------------------LIDGYVKAGDLAHARQLFD 201
S N LID Y K G + A +L D
Sbjct: 430 SWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHD 489
Query: 202 RMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQ 261
R+ + VSW +++G++ Q EEA + F M+++ + PDN + L CA L +E
Sbjct: 490 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 549
Query: 262 GKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAM 321
GK IH I +++ D+++S+ LVD Y+KCG + IFE + ++ TWNAM+ G A
Sbjct: 550 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 609
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
HGLG +L F M +KP+ T L L C H GLV++ F M S YG+ +L+
Sbjct: 610 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 669
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL 441
HY C+ D++GR+G + +ALE+I+ MP D +W LL C+IHGNVE+AE AA +++L
Sbjct: 670 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQL 729
Query: 442 KPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+PED Y +L+++YANA W +V K+R+ + +KK GCS I++
Sbjct: 730 EPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEI 776
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 2/254 (0%)
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
+ P +F + + CS + + H++++ F VFV N L+ +Y L A
Sbjct: 37 ATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFA 96
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE 225
++FD + RD VS N ++ GY GD+ A++LFD MP RD VSW +L++GY +
Sbjct: 97 FKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHR 156
Query: 226 EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
+ I +F M + D L +C+ L + G IH D + L+
Sbjct: 157 KVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALL 216
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
D YAKC ++ +I+ F S EKN +W+A++ G + R L F M +A +
Sbjct: 217 DMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQS 276
Query: 346 TILGALVGCSHAGL 359
T C AGL
Sbjct: 277 TFASVFRSC--AGL 288
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 180/454 (39%), Gaps = 101/454 (22%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L ++ F+++P + S++ II + LF +M+ + +F + R+
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF----------- 169
C+ L + L +H LK F DV + + + +Y + L DAQ+LF
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344
Query: 170 ----------DEILYRDVVS-----------------------------------CNTLI 184
D+ L D VS N ++
Sbjct: 345 NAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 404
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
D Y K G L A +F+ M RDAVSW ++A + Q+ E+ + LF
Sbjct: 405 DMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF------------- 451
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
IH I +++ +DSF+ L+D Y+KCG + A ++ +
Sbjct: 452 --------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRL 491
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
E+ + +WNA++ G ++ + FS+M+E + PD T L C++ V+ +
Sbjct: 492 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 551
Query: 365 KLFDEMESVYGVSKELKH----YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
++ ++ + KEL+ + D+ + G +++ + +K P D W+ ++
Sbjct: 552 QIHAQI-----IKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNAMVC 605
Query: 421 GCRIHGNVEIAEAAAEHVM--KLKPEDGGVYKVL 452
G HG E A E++ +KP VL
Sbjct: 606 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 639
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 194/501 (38%), Gaps = 83/501 (16%)
Query: 2 TLNNFIKRCKTIKQI---HQIHAHFLT---KGLLFLSPCHILTTILYAITTFKPISSASS 55
T ++ + C K + Q HA + K +F++ C I I + F
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 56 PTTDPLSY---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
P D +S+ A +F+ +P S+N++I + + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
QM + D +F +L++CS L H IH +K+GF CDV
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDV-------------- 209
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
V+ + L+D Y K L + Q F MP ++ VSW ++AG Q
Sbjct: 210 -----------------VTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQ 252
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
+D ++LF M + S +CA L L G +H + D +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
T +D Y KC ++ A ++F S NL ++NA++VG A G +
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKG--------------L 358
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS-KELKHYG-CMA----DLLGRAG 394
D V++ GA C A + + L V+G+S K L C+A D+ G+ G
Sbjct: 359 GLDEVSLSGAFRAC--AVIKGDLEGL-----QVHGLSMKSLCQSNICVANAILDMYGKCG 411
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPE---DGGVYKV 451
+ EA + ++M + D W+ ++ +GN E + H +K D V
Sbjct: 412 ALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIA 470
Query: 452 LADVYANADRWEDVVKIRRSL 472
L D+Y+ E K+ L
Sbjct: 471 LIDMYSKCGMMEKAEKLHDRL 491
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 251/449 (55%), Gaps = 8/449 (1%)
Query: 44 ITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR 103
I T+ + + + D L A F+ +P S S+N + A+ P A+ LF QM
Sbjct: 192 IITWTSMVTGYAKMGD-LESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 104 TVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR 163
I PD ++ + +CS + +LA +I + + + + FV +L+ ++ F L
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310
Query: 164 DAQELFDEI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD 222
A+ +FDE+ R+ V+ N +I Y + G L+ AR+LFD MP RD VSW +++AGYAQ+
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNG 370
Query: 223 QCEEAIQLFCNMMD-LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS 281
+ +I+LF M+ +DI+PD + + S LSAC +G L+ + + I++
Sbjct: 371 ESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGF 430
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK 341
L+ Y+KCG + A IF++ +++ ++N ++ G A +G G+ ++ M E I+
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490
Query: 342 PDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
PD VT +G L CSHAGL++E + +F +++ + HY CM DLLGRAG ++EA
Sbjct: 491 PDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKM 545
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADR 461
+I+ MPM V+ LL RIH V + E AA + +L+P++ G Y +L+++YA+ R
Sbjct: 546 LIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGR 605
Query: 462 WEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
WEDV ++R + G +KK+ G S ++ G
Sbjct: 606 WEDVKRVREMMKKGGLKKSVGMSWVEYKG 634
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 189/414 (45%), Gaps = 81/414 (19%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+ I+Q+ Q H H + L S + ++ +L T + P +Y SIF
Sbjct: 10 KISNIRQLRQFHGHLVHNSLH--SHNYWVSLLLINCTRLH-----AHP-----AYVDSIF 57
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ P P Y+ +++ ++ + V LF ++++ P + + +L++ +
Sbjct: 58 TSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKS---- 113
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE----------------- 171
H+ VLKLG I D F+ N+++ +Y ++ A+ LF++
Sbjct: 114 -GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 172 ---------ILY-----RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
+L+ R++++ +++ GY K GDL AR+ FD MP R VSW + +
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
YAQ + +EA+ LF M++ I PD+ V +S+C+ +G+ +I R I+ I ++
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 278 SFLSTGLVDFYAK--------------------------------CGYINTAIEIFESSQ 305
SF+ T L+D +AK G ++ A E+F++
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSHAG 358
++++ +WN+M+ G A +G +S+ F MI I+PD VTI L C H G
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIG 406
>gi|195651797|gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 240/432 (55%), Gaps = 11/432 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A F+ +P + SYN ++ + + A+ LF MR+ + ++ L+R
Sbjct: 107 LADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWT----HVTWATLIRG 162
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ + A+ + V L+ Y + A+E+FD + R+
Sbjct: 163 FAEKGDMAEARRWFEATPP--GMRTVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVW 220
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++++ GY KAGD AR +FDR+P R+ V+W L+AGYAQ E+A++ F M+ +K
Sbjct: 221 SSMVTGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVK 280
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + S LSACA+LG LEQGK +H +I IR + F+ GL+D YAKCG + A I
Sbjct: 281 PDEFTMASLLSACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYI 340
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+S + KN WN M+ LA HG +L F +M + KP+ +T+L L C+H G V
Sbjct: 341 FDSMRWKNNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFV 400
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE ++F+++++ YGV ++HYGC+ DLLGRAG ++EA E++ M + +W LLG
Sbjct: 401 DEGLQIFNKLDA-YGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLG 459
Query: 421 GCRIHGNVEIAEAAAEHVMKL----KPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
CR+H + E++ E +++L + Y +LA++ A ++RWE ++RR +
Sbjct: 460 ACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRG 519
Query: 477 IKKNAGCSLIQL 488
++K GCS ++L
Sbjct: 520 VEKTPGCSSLEL 531
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 114 FPFLLRAC--SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
P LL+A S L +++H++ LK F D+ V +++ +YC L DA+ FDE
Sbjct: 57 LPVLLKAAAASSPTELGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDE 116
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+ R+V+S N L+ GY AGD+ A LF M V+W TL+ G+A+ EA + F
Sbjct: 117 MPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEKGDMAEARRWF 176
Query: 232 CNMMDLDIKPDNIALVSALS------ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
+ P + V + CA G++E + + + ++F+ + +V
Sbjct: 177 ------EATPPGMRTVVTWTVLVQGYVCA--GDMETAREVFDRMPAR----NAFVWSSMV 224
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
Y K G A +F+ +NL WNA++ G A G +L F M++ R+KPD
Sbjct: 225 TGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEF 284
Query: 346 TILGALVGCSHAGLVDEARKLFD 368
T+ L C+ G +++ +K+ D
Sbjct: 285 TMASLLSACAQLGSLEQGKKVHD 307
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 244/476 (51%), Gaps = 43/476 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+++ Q+HAH L G+ F + C A+T + + YA SIF I
Sbjct: 11 MEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKW-----------GSMDYACSIFTQID 59
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
PS+F YNT+IR + A++L+ M + PD +++PF+L+ACS L
Sbjct: 60 EPSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQ 119
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+H V K+G DV V NSL I+ Y K G+
Sbjct: 120 VHGHVFKMGLEGDVIVQNSL-------------------------------INMYGKCGE 148
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNIALVSALS 251
+ +A +F+ M + SW ++ +A + E + L M + + + LV+ LS
Sbjct: 149 IKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLS 208
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
AC LG + GK IH + N ++ + T L+D Y K G + + +F++ EKN ++
Sbjct: 209 ACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYS 268
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
+ M+ GLA+HG G+ +L FS MIE + PD V +G CSHAGLV+E + F M+
Sbjct: 269 YTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQ 328
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ + ++HYGCM DLLGR G+++EA E+IK M + + +W LL C++H N+EI
Sbjct: 329 FEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIG 388
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+ AAE++ L + G Y VLA++YA A +W+DV KIR L + + G SLI+
Sbjct: 389 KIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIE 444
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 244/439 (55%), Gaps = 13/439 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLL 118
L A+++ P P+ Y + I AH+ A+ L S+M + P ++ L
Sbjct: 72 LDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASL 131
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD-V 177
AC L ++ + +H +KL + +V +L+ +Y A+ LFD + V
Sbjct: 132 PACGCL---AVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHV 188
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VS ++ Y K G L AR LFD +P +D V W ++ GY Q + EA++LF M+
Sbjct: 189 VSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRS 248
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYI----ELNQIRVDSFLSTGLVDFYAKCGY 293
++PD +++V ALSA A+LG E G+ +H ++ ++R+++ + T LVD Y KCG
Sbjct: 249 GVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGS 308
Query: 294 INTAIEIFE---SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
+ A+ +F ++++ WNAM+ G AMHG R +L F ++ + P +T +G
Sbjct: 309 LEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGV 368
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
L CSH+GLVDE R LF ME YG+ +++HYGCM DLLGRAG +EEA ++++ M
Sbjct: 369 LNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKP 428
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR 470
D +W+ LLG CR+H N+ + + A++++ + G Y +L+++YA A +W +V ++R
Sbjct: 429 DAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRS 488
Query: 471 SLDAGKIKKNAGCSLIQLN 489
+ A ++K GCS +++
Sbjct: 489 MMRASGVQKEPGCSAVEVG 507
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 251/497 (50%), Gaps = 50/497 (10%)
Query: 1 MTLNNFIKRCKTIK---QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPIS--SASS 55
M L I K++ ++ QIHAH + T I Y + + +S + S
Sbjct: 1 MALETVISAIKSVSHKTRLLQIHAHIIRT-----------TLIQYPTVSLQFLSRIALSG 49
Query: 56 PTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFP 115
P D SY+ F + +P YNT+IRA ++ SP ++L+ MR I D S
Sbjct: 50 PLQDA-SYSQRFFGQLSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSS 108
Query: 116 FLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
F +++C + +H + K G D +L ++M +Y + R DA ++FDE
Sbjct: 109 FAVKSCIRFLYLPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDE---- 164
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
MP RD V+W +++ ++++ +A+ LF M
Sbjct: 165 ---------------------------MPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQ 197
Query: 236 DLDIK--PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
K PD++ + L ACA L LE G+ IH YI R L L+ Y++CG
Sbjct: 198 GSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGC 257
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
++ A E+F+ KN+ +W+AM+ GLAM+G GR ++ F M+ + PD T G L
Sbjct: 258 LDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSA 317
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
CS++G+VDE F M +GV+ + HYGCM DLLGRAGL+++A ++I M + D
Sbjct: 318 CSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDST 377
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+W LLG CRIHG+V + E H+++LK ++ G Y +L ++Y++A WE V ++R+ +
Sbjct: 378 MWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMK 437
Query: 474 AGKIKKNAGCSLIQLNG 490
I+ GCS I+L G
Sbjct: 438 NKSIQTTPGCSTIELKG 454
>gi|414879404|tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 240/432 (55%), Gaps = 11/432 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A F+ +P + SYN ++ + + A+ LF MR+ + ++ L+R
Sbjct: 107 LADARRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWT----HVTWATLIRG 162
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ + A+ + V L+ Y + A+E+FD + R+
Sbjct: 163 FAEKGDMAEARRWFEATPP--GMRTVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVW 220
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++++ GY KAGD AR +FDR+P R+ V+W L+AGYAQ E+A++ F M+ +K
Sbjct: 221 SSMVTGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVK 280
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + S LSACA+LG LEQGK +H +I IR + F+ GL+D YAKCG + A I
Sbjct: 281 PDEFTMASLLSACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYI 340
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+S + KN WN M+ LA HG +L F +M + KP+ +T+L L C+H G V
Sbjct: 341 FDSMRWKNNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFV 400
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE ++F+++++ YGV ++HYGC+ DLLGRAG ++EA E++ M + +W LLG
Sbjct: 401 DEGLQIFNKLDA-YGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLG 459
Query: 421 GCRIHGNVEIAEAAAEHVMKL----KPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
CR+H + E++ E +++L + Y +LA++ A ++RWE ++RR +
Sbjct: 460 ACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRG 519
Query: 477 IKKNAGCSLIQL 488
++K GCS ++L
Sbjct: 520 VEKTPGCSSLEL 531
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 114 FPFLLRAC--SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
P LL+A S L +++H++ LK F D+ V +++ +YC L DA+ FDE
Sbjct: 57 LPVLLKAAAASSPAELGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDE 116
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+ R+V+S N L+ GY AGD+ A LF M V+W TL+ G+A+ EA + F
Sbjct: 117 MPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEKGDMAEARRWF 176
Query: 232 CNMMDLDIKPDNIALVSALS------ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
+ P + V + CA G++E + + + ++F+ + +V
Sbjct: 177 ------EATPPGMRTVVTWTVLVQGYVCA--GDMETAREVFDRMPAR----NAFVWSSMV 224
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
Y K G A +F+ +NL WNA++ G A G +L F M++ R+KPD
Sbjct: 225 TGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEF 284
Query: 346 TILGALVGCSHAGLVDEARKLFD 368
T+ L C+ G +++ +K+ D
Sbjct: 285 TMASLLSACAQLGSLEQGKKVHD 307
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 238/424 (56%), Gaps = 11/424 (2%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ +P + ++N +I + +AV+LF +M + R+ +
Sbjct: 151 VFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETA 210
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ S++ +V ++ Y + A+E+F+ + R+ + +++I G
Sbjct: 211 RRFFDDVPSELR------NVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISG 264
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G++ AR +FDR+P R+ V+W +L++GYAQ+ EEA++ F M +PD + +
Sbjct: 265 YCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTI 324
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S LSAC++LG L+ GK IH + I+++ F+ GLVD YAKCG + A IFE
Sbjct: 325 ASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAH 384
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+N WN+M+ G A+HG + +L +F RM ++ PD +T L L C+H G V+ ++
Sbjct: 385 RNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEI 444
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F ME YG++ +KHYGC+ DLLGRAG I+EA ++IK+MP+ + VW LLG CR+H
Sbjct: 445 FSRMEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHL 503
Query: 427 NVEIAEAAAEHVMKLKPE-DGGV---YKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
++E+A+ E ++K+ G Y +L+++YA +DRWE K+R + +K +G
Sbjct: 504 DMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSG 563
Query: 483 CSLI 486
CS I
Sbjct: 564 CSSI 567
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 171/362 (47%), Gaps = 17/362 (4%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSF---PFLLRACSQLCSHSLA 130
PS ++ +IR++ +P A+++++ +R + Y P +L+AC+ L
Sbjct: 58 PSLSNWCHLIRSYLSQGAPREALLVYTGLRRKGV----YLLGVAPLVLKACASLSIVKHG 113
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ +H++ +K G DV + SL+ +Y + D++++FD + R+ V+ N +I GY+
Sbjct: 114 KALHAESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGN 173
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
GD A LF++M R AV+W ++ G+A+S E A + F D+ + N+ + +
Sbjct: 174 GDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFF---DDVPSELRNVVTWTVM 230
Query: 251 -SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
AR E+E + + + F + ++ Y K G + A IF+ +NL
Sbjct: 231 VDGYARNAEMEAAREVFEGMPQRNF----FAWSSMISGYCKKGNVKEARSIFDRIPVRNL 286
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
WN+++ G A +G +L F +M +PD VTI L CS GL+D +K+
Sbjct: 287 VNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHM 346
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M G+ + D+ + G + A + + M W+ ++ G IHG +
Sbjct: 347 MNH-KGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRA-CWNSMISGFAIHGQSK 404
Query: 430 IA 431
A
Sbjct: 405 EA 406
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A SIF+ IP + ++N++I + A+ F +M+ PD + +L ACSQ
Sbjct: 274 ARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQ 333
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + IH + G + FVLN L+ +Y L +A+ +F+ + +R+ N++
Sbjct: 334 LGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSM 393
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G Q +EA++ F M D PD
Sbjct: 394 ISGFAIHG-------------------------------QSKEALEFFGRMEDSHEGPDE 422
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I +S LSACA G + G I +E + L+D + G I A ++ +
Sbjct: 423 ITFLSVLSACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKR 482
Query: 304 SQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
K N W A+L +H L + R++E +K D
Sbjct: 483 MPVKPNDVVWGALLGACRVH----LDMEMADRVVEEIVKVD 519
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 237/425 (55%), Gaps = 4/425 (0%)
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
N + S+ + I T + A F+ MR + P +F LL C S S
Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGS 63
Query: 129 --LAQTIHSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
L +H KLG + V V +++ +Y R++ A+ +FD + ++ V+ NT+ID
Sbjct: 64 ETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMID 123
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY+++G + +A +LFD+MP D +SW +V G+ + EEA+ F M +KPD +A
Sbjct: 124 GYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVA 183
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+++AL+AC LG L G +HRY+ + + +S L+D Y +CG + A E+F+ +
Sbjct: 184 IIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKME 243
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++ + +WN+++VG A +G SLVYF +M E KP+ VT GAL CSH GLVDE +
Sbjct: 244 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLR 303
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F M+ Y +S ++HYGC+ DL RAG +E+AL++++ MPM + V LL CR H
Sbjct: 304 FFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRNH 363
Query: 426 GNVEI-AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
GN + AE +H+ L + Y +L+++YA +WE ++RR + +KK G S
Sbjct: 364 GNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQPGFS 423
Query: 485 LIQLN 489
I+++
Sbjct: 424 SIEID 428
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 37/264 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ +F+ +P P S+ ++ A+V F +M+ + PD+ + L AC+
Sbjct: 134 AVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALNACTN 193
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + SL +H V+ F +V V NSL+ +YC + A+E+FD++ R VVS N++
Sbjct: 194 LGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSV 253
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G+ AH E++ F M + KP+
Sbjct: 254 IVGFAANGN-AH------------------------------ESLVYFRKMQEEGFKPNA 282
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ AL+AC+ +G +++G + ++ + R++ + LVD Y++ G + A+++
Sbjct: 283 VTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHY--GCLVDLYSRAGRLEDALKV 340
Query: 301 FESSQEK-NLFTWNAMLVGLAMHG 323
+S K N ++L HG
Sbjct: 341 VQSMPMKPNEVVIGSLLAACRNHG 364
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 208/347 (59%), Gaps = 1/347 (0%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D+ NS++ ++ +A LF+++ RDVVS ++DGY K G++ AR LFD MP
Sbjct: 252 DLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMP 311
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPDNIALVSALSACARLGELEQGK 263
RD +S ++AGY Q+ EA+ F +M+ ++ PDN L+ LSA A+LG ++G
Sbjct: 312 ERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGV 371
Query: 264 NIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
+H YIE N + L L+D YAKCG I+ A+ +FE +K++ WNA++ GLA+HG
Sbjct: 372 ALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHG 431
Query: 324 LGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHY 383
LG ++ F M + +KPD +T +G L C+HAGLV E F+ M V+ V +L+HY
Sbjct: 432 LGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHY 491
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKP 443
GCM D+LGRAG +EEA + ++KMP+ + VW LL CR H N I E A+H++ +
Sbjct: 492 GCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDS 551
Query: 444 EDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ Y +L+++YA W DV +IR + +KK GCS I+L G
Sbjct: 552 YNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEG 598
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 229/453 (50%), Gaps = 33/453 (7%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ + KT+ ++QIH+ +T G F++ + T I+ + SS+ P + +A
Sbjct: 20 LLPKSKTLHDVNQIHSRLITTG--FINNPSLTTRIILNFS-----SSSHKPLVE---FAR 69
Query: 66 SIFNNIPY-------PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+F + + + F +N II++ + P A V+F+ M + D +SF +L
Sbjct: 70 YLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVL 129
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+ACS+L IH + ++ DVF+ N LM +Y L A++LFD ++ RD V
Sbjct: 130 KACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSV 189
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
S N++IDGYVK G + AR+LFD MP ++ +SW ++++GYA+S EE +++ + +
Sbjct: 190 SFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARS---EEGLRVAWELFE 246
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI-RVDSFLSTGLVDFYAKCGYIN 295
K D I+ S + C + G++E ++ NQ+ + D +VD YAK G I+
Sbjct: 247 EMPKRDLISWNSMIDGCVKCGKMENAHHL-----FNQMPKRDVVSWANMVDGYAKLGEID 301
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGC 354
A +F+ E+++ + NAM+ G +G +L +F M+ + + PD T+L L
Sbjct: 302 IARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAI 361
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ G DE L +E G S K + D+ + G I+ AL + + + +
Sbjct: 362 AQLGHFDEGVALHCYIED-NGFSLSEKLGVALIDMYAKCGSIDNALSVFEDID-DKSIDH 419
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKL--KPED 445
W+ ++GG IHG E+A + KL KP+D
Sbjct: 420 WNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDD 452
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 251/490 (51%), Gaps = 46/490 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
T+ N R + I++ ++HAH + L PC L T L D L
Sbjct: 63 TVLNECLRKRAIREGQRVHAHMIKTHYL---PCVYLRTRLIVFYV----------KCDSL 109
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A +F+ +P + S+ +I A++ A+ LF QM P+ ++F +L +C
Sbjct: 110 RDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSC 169
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
L + IHS ++KL + V+V +SL+
Sbjct: 170 IGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLL---------------------------- 201
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
D Y K G + AR +F +P RD VS +++GYAQ EEA++LF + ++
Sbjct: 202 ---DMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQS 258
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + S L+A + L L+ GK +H ++ +++ L L+D Y+KCG + A IF
Sbjct: 259 NYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIF 318
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLV 360
++ E+ + +WNAMLVG + HG GR L F+ MI E ++KPD VT+L L GCSH GL
Sbjct: 319 DTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLE 378
Query: 361 DEARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
D+ +F +M S V + KHYGC+ D+LGRAG +E A E +KKMP +W LL
Sbjct: 379 DKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLL 438
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C +H N++I E +++++PE+ G Y +L+++YA+A RWEDV +R + + K
Sbjct: 439 GACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTK 498
Query: 480 NAGCSLIQLN 489
G S I+L+
Sbjct: 499 EPGRSWIELD 508
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 165/403 (40%), Gaps = 61/403 (15%)
Query: 66 SIFNNIPYPSTFSYNT--IIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+IF STF N+ ++ H + + L +L +R + +F + +L C +
Sbjct: 14 AIFQKPRLLSTFPSNSHHVLNIH-IHDTRLREALLHMALR--GLDTNFQDYNTVLNECLR 70
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ Q +H+ ++K ++ V++ L+ Y LRDA+ +FD + R+VVS +
Sbjct: 71 KRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAM 130
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I Y + GYA +A+ LF M+ +P+
Sbjct: 131 ISAYSQ--------------------------RGYAS-----QALSLFVQMLRSGTEPNE 159
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ L++C G+ IH +I ++ + L+D YAK G I+ A IF+
Sbjct: 160 FTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQC 219
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
E+++ + A++ G A GL +L F R+ ++ + VT L S +D
Sbjct: 220 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHG 279
Query: 364 RKLFDEMESVYGVSKELKHY----GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+++ + + + E+ Y + D+ + G + A + + V W+ +L
Sbjct: 280 KQVHNHL-----LRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTL-HERTVISWNAML 333
Query: 420 GGCRIHG---------NVEIAEAAAEHVMKLKPEDGGVYKVLA 453
G HG N+ I E K+KP+ V VL+
Sbjct: 334 VGYSKHGEGREVLELFNLMIDEN------KVKPDSVTVLAVLS 370
>gi|449476231|ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like, partial [Cucumis sativus]
Length = 472
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/492 (33%), Positives = 259/492 (52%), Gaps = 52/492 (10%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
T +K C + Q +IHAH + G LS I ++L+ +SSAS
Sbjct: 20 TFTYALKACCFLHQTQKGLEIHAHLIKSG--HLSDIFIQNSLLHFYILDGDVSSASL--- 74
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
IF++IP P S+ +II + A+ S+ ++++ P+ + L
Sbjct: 75 --------IFDSIPDPDVVSWTSIISGLSKLGFEKEAL---SKFLSMNVRPNSTTLVTAL 123
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
CS L L + IH R+R E +V+
Sbjct: 124 STCSSLRCLKLGKAIHGL------------------------RMRTLNE-------ENVI 152
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL- 237
N L+D YV+ L A LF++MP RD VSW T++ GYAQS CEEA+++F NM+ +
Sbjct: 153 LENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNMVHVG 212
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYINT 296
+ P+ LV+ LSAC+ + L G+ +H YI + + +D + L++ Y KCG +
Sbjct: 213 EAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEM 272
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
AI IF++++ K++ +W+ ++ GLAM+GLG+ + V FS M+ I PD VT LG L CSH
Sbjct: 273 AILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHGISPDDVTFLGLLSACSH 332
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
GL+++ +F+ M+ VY +S +++HY CM D+ G+AGL++EA IK+MPM + VW
Sbjct: 333 GGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWG 392
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C++HGN + E E ++ K G + +L++ YA DRW D +R ++ +
Sbjct: 393 ALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACCDRWNDANDVRVAMRSRG 452
Query: 477 IKKNAGCSLIQL 488
+KK AG S I++
Sbjct: 453 LKKMAGRSWIEM 464
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 153/326 (46%), Gaps = 40/326 (12%)
Query: 104 TVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR 163
++ I + ++F + L+AC L IH+ ++K G + D+F+ NSL+H Y + +
Sbjct: 11 SLPISHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVS 70
Query: 164 DAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQ 223
A +FD I DVVS ++I G K G F++
Sbjct: 71 SASLIFDSIPDPDVVSWTSIISGLSKLG--------FEK--------------------- 101
Query: 224 CEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIH--RYIELNQIRVDSFLS 281
EA+ F +M +++P++ LV+ALS C+ L L+ GK IH R LN+ V L
Sbjct: 102 --EALSKFLSM---NVRPNSTTLVTALSTCSSLRCLKLGKAIHGLRMRTLNEENV--ILE 154
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARI 340
L+DFY +C Y+ +A +FE ++++ +W M+ G A GL ++ F M+
Sbjct: 155 NALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEA 214
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
P+ T++ L CS + + + + S + V + + ++ + G +E A+
Sbjct: 215 IPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAI 274
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHG 426
+I K D+ WS ++ G ++G
Sbjct: 275 -LIFKATEHKDIVSWSTIISGLAMNG 299
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 238/424 (56%), Gaps = 11/424 (2%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ +P + ++N +I + +AV+LF +M + R+ +
Sbjct: 22 VFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETA 81
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ S++ +V ++ Y + A+E+F+ + R+ + +++I G
Sbjct: 82 RRFFDDVPSELR------NVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISG 135
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K G++ AR +FDR+P R+ V+W +L++GYAQ+ EEA++ F M +PD + +
Sbjct: 136 YCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTI 195
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
S LSAC++LG L+ GK IH + I+++ F+ GLVD YAKCG + A IFE
Sbjct: 196 ASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAH 255
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+N WN+M+ G A+HG + +L +F RM ++ PD +T L L C+H G V+ ++
Sbjct: 256 RNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEI 315
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F ME YG++ +KHYGC+ DLLGRAG I+EA ++IK+MP+ + VW LLG CR+H
Sbjct: 316 FSRMEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHL 374
Query: 427 NVEIAEAAAEHVMKLKPE-DGGV---YKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
++E+A+ E ++K+ G Y +L+++YA +DRWE K+R + +K +G
Sbjct: 375 DMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSG 434
Query: 483 CSLI 486
CS I
Sbjct: 435 CSSI 438
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 10/282 (3%)
Query: 151 SLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
SL+ +Y + D++++FD + R+ V+ N +I GY+ GD A LF++M R AV+
Sbjct: 5 SLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVT 64
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL-SACARLGELEQGKNIHRYI 269
W ++ G+A+S E A + F D+ + N+ + + AR E+E + + +
Sbjct: 65 WIEMIDGFARSGDTETARRFF---DDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGM 121
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
F + ++ Y K G + A IF+ +NL WN+++ G A +G +L
Sbjct: 122 PQRNF----FAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEAL 177
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F +M +PD VTI L CS GL+D +K+ M + G+ + D+
Sbjct: 178 EAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIH-HMMNHKGIKLNQFVLNGLVDM 236
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G + A + + M W+ ++ G IHG + A
Sbjct: 237 YAKCGDLANARLIFEGMAHRNRA-CWNSMISGFAIHGQSKEA 277
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A SIF+ IP + ++N++I + A+ F +M+ PD + +L ACSQ
Sbjct: 145 ARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQ 204
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + IH + G + FVLN L+ +Y L +A+ +F+ + +R+ N++
Sbjct: 205 LGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSM 264
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G Q +EA++ F M D PD
Sbjct: 265 ISGFAIHG-------------------------------QSKEALEFFGRMEDSHEGPDE 293
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I +S LSACA G + G I +E + L+D + G I A ++ +
Sbjct: 294 ITFLSVLSACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKR 353
Query: 304 SQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
K N W A+L +H L + R++E +K D
Sbjct: 354 MPVKPNDVVWGALLGACRVH----LDMEMADRVVEEIVKVD 390
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
+ T LV YAKCG + + ++F+ E+N TWNAM+ G +G + +++ F +M
Sbjct: 2 IGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKM---S 58
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH---YGCMADLLGRAGLI 396
I+ VT + + G + +G + AR+ FD++ S EL++ + M D R +
Sbjct: 59 IRT-AVTWIEMIDGFARSGDTETARRFFDDVPS------ELRNVVTWTVMVDGYARNAEM 111
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
E A E+ + MP + F WS ++ G GNV+ A +
Sbjct: 112 EAAREVFEGMPQ-RNFFAWSSMISGYCKKGNVKEARS 147
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 236/431 (54%), Gaps = 31/431 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F + ++N+II A+ AV LF M + PD + L A
Sbjct: 219 LTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASA 278
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+Q A+++H V + G+ DV D+++
Sbjct: 279 VAQCGDELGAKSVHCYVRRRGW--DV----------------------------GDIIAG 308
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-I 239
N ++D Y K + A+++FD +P RD VSW TL+ GY Q+ EAI+++ +M + + +
Sbjct: 309 NAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGL 368
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KP VS L A + LG L+QG +H + +D +++T L+D YAKCG + A+
Sbjct: 369 KPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMF 428
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+FE ++ WNA++ GL +HG G +L FS+M + IKPD VT + L CSHAGL
Sbjct: 429 LFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGL 488
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ R FD M++VYG+ KHY CM D+LGRAG ++EA E I+ MP+ D VW LL
Sbjct: 489 VDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALL 548
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CRIHGNVE+ + A++++ +L PE+ G Y +++++YA +W+ V +R + ++K
Sbjct: 549 GACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQK 608
Query: 480 NAGCSLIQLNG 490
G S +++ G
Sbjct: 609 TPGWSSMEVKG 619
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 54/323 (16%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD ++FP L+RA S A +H+ L+LG
Sbjct: 67 PDSFTFPPLVRAAPGPAS---AAQLHACALRLG--------------------------- 96
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
+L+ +V + +L+ Y++ G +A A ++FD MP RD +W +++G ++ + +A+
Sbjct: 97 ---LLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAV 153
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
L M+ + D + L S L C LG+ +H Y + + + F+ L+D Y
Sbjct: 154 TLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVY 213
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
K G + A +F ++L TWN+++ G ++ F M+E+ + PD +T++
Sbjct: 214 GKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLV 273
Query: 349 GALVGCSHAGLVDE----------ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEE 398
+ G DE R+ +D + + G M D+ + I+
Sbjct: 274 SLASAVAQCG--DELGAKSVHCYVRRRGWDVGDIIAG--------NAMVDMYAKMSKIDA 323
Query: 399 ALEMIKKMPMGGDVFVWSGLLGG 421
A ++ +P DV W+ L+ G
Sbjct: 324 AQKVFDNLP-DRDVVSWNTLITG 345
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 269 IELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLS 328
+ L + + F S LV Y + G + A +F+ E+++ WNAML GL + +
Sbjct: 93 LRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADA 152
Query: 329 LVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESV-YGVSKELKHYGCMA 387
+ RM+ + D VT+ L C G D A L + +V +G+S EL +
Sbjct: 153 VTLLGRMVGEGVAGDAVTLSSVLPMCVVLG--DRALALVMHVYAVKHGLSGELFVCNALI 210
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
D+ G+ G++ EA + M + D+ W+ ++ G V A
Sbjct: 211 DVYGKLGMLTEAHWVFGGMAL-RDLVTWNSIISANEQGGKVAAA 253
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 246/428 (57%), Gaps = 3/428 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN++ + ++ +I +V LF+QMR + D ++ L+ C
Sbjct: 324 AKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCS 383
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +HS LK G I V V NSL+ +Y L+ A+ +F + +D+VS ++
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSM 443
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPD 242
I + + G++A AR+ FD M ++ ++W ++ Y Q E+ ++++ M+ + D++PD
Sbjct: 444 ITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPD 503
Query: 243 NIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ V+ CA LG + G I R +++ I +D+ ++ ++ Y+KCG I A ++F
Sbjct: 504 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLI-LDTSVANAVITMYSKCGRILEARKVF 562
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ K++ +WNAM+ G + HG+G+ ++ F +++ KPD ++ + L GCSH+GLV
Sbjct: 563 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E + FD M+ V+ +S L+H+ CM DLLGRAG + EA ++I +MPM VW LL
Sbjct: 623 EGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSA 682
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
C+IHGN E+AE AA+HV +L D G Y ++A +YA+A + +D +IR+ + IKKN
Sbjct: 683 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 742
Query: 482 GCSLIQLN 489
G S +++N
Sbjct: 743 GYSWMEVN 750
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 147/295 (49%), Gaps = 1/295 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
LS A+ +F +P S+NT++ + L ++ F M R+ P+ ++F + ++
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+C L SLA + V K G D V +L+ ++ + A LF I +
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N+++ GYVK + HA +LFD MP RD VSW +V+ +QS + EA+ + +M +
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ D+ S+L+ACARL L GK +H + N +D ++++ LV+ YAKCG A
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKG 326
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+F S ++N W ++ G HG S+ F++M + D + + GC
Sbjct: 327 VFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 46/366 (12%)
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF-DE 171
+F LR+C + + A+ +H +++ +G VF+ N+L+H Y L DA+ L +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
I + +V++ N +++GYVK G L+ A +LF RMP RD SW TL++GY QS Q +++ F
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 232 CNM-MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
+M D P+ A+ +C LGE + ++ + DS ++ LVD + +
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
CG ++ A +F +E +F N+MLVG +K G
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGY--------------------VKTYG------ 219
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
VD A +LFD M +++ + M L ++G + EAL+M+ M G
Sbjct: 220 ---------VDHALELFDSMP-----ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265
Query: 411 ---DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKP-EDGGVYKVLADVYANADRWEDVV 466
D ++ L C ++ + V++ P D V L ++YA +++
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAK 325
Query: 467 KIRRSL 472
+ SL
Sbjct: 326 GVFNSL 331
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 169/405 (41%), Gaps = 73/405 (18%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
T + +AL +F+++P S+N ++ A + A+ + M++ + D ++
Sbjct: 217 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 276
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L AC++L S + +H+QV++ ++ C+ D
Sbjct: 277 LTACARLSSLRWGKQLHAQVIR--------------NLPCI-----------------DP 305
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+ L++ Y K G A+ +F+ + R+ V+W L+AG+ Q E+++LF M
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRY-IELNQIRVDSFLSTGLVDFYAKC----- 291
+ D AL + +S C +L G+ +H ++ QI+ +S L+ YAKC
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA-VVVSNSLISMYAKCDNLQS 424
Query: 292 --------------------------GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
G I A E F+ KN+ TWNAML HG
Sbjct: 425 AESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAE 484
Query: 326 RLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLFDEM---ESVYGVSKELK 381
L ++ M+ E ++PD VT + GC+ G A KL D++ G+ +
Sbjct: 485 EDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLG----ANKLGDQIIGRTVKVGLILDTS 540
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ + + G I EA ++ + + D+ W+ ++ G HG
Sbjct: 541 VANAVITMYSKCGRILEARKVFDFLNV-KDIVSWNAMITGYSQHG 584
>gi|449459636|ref|XP_004147552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Cucumis sativus]
gi|449484988|ref|XP_004157038.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Cucumis sativus]
Length = 495
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 270/494 (54%), Gaps = 29/494 (5%)
Query: 22 HFLTKGLLFLSPCHILTTI---LYAITTFKPISSAS-SPTTDPL--SYALSIFNNIPYPS 75
H L KG F SP T+ + ++F I S S S +DPL S + I I Y +
Sbjct: 2 HSLWKGCKFFSPRSSSTSQNLQFLSFSSFLQIKSLSPSAASDPLRCSSSFLISQVIKYAT 61
Query: 76 TFSYNTIIRAHTLFSSPL-NAVV--------------LFSQMRTVS-IPP--DFYSFPFL 117
T IR+ + S L NA L+ +R IPP D +++ FL
Sbjct: 62 THKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYSFL 121
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L +C+ L +H+ KLGF V+V +++ +Y L DA ++FDE+ R
Sbjct: 122 LHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAVLRMYAASGFLLDAMKVFDEMPDRSS 181
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-D 236
V+ N LI G VK G+L AR +FD+MP R VSW ++ GY + ++ EEA LF M+
Sbjct: 182 VTWNVLITGLVKFGELKRARDVFDQMPMRTVVSWTAIIDGYTRLNRHEEAAGLFWRMVAH 241
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV-DSFLSTGLVDFYAKCGYIN 295
++P+ + L++ A + LG L+ +++H Y E +V D ++ L+D YAKCG IN
Sbjct: 242 FGMEPNEVTLLTIFPAISNLGALKLCQSVHAYAEKKGFKVSDVRIANSLIDCYAKCGCIN 301
Query: 296 TAIEIFE--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+A ++FE S++ KNL +W +++ G MHG+G+ ++ F M + +P+ VT L +
Sbjct: 302 SASKVFEEMSAEIKNLVSWTSIISGFTMHGMGKEAMESFEIMEKEGHEPNRVTFLSIVSA 361
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG-GDV 412
CSH GLV+E + F++M + Y + ++ HYG + D+LGRAG IEEA ++ ++P V
Sbjct: 362 CSHGGLVEEGLEFFEKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEIASV 421
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
+W LLG C HGNV +AE + ++ ++ GG Y ++++++A A ++ D + RR +
Sbjct: 422 VIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWRRLM 481
Query: 473 DAGKIKKNAGCSLI 486
D+ K K G SL+
Sbjct: 482 DSSKFSKIPGQSLV 495
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 245/464 (52%), Gaps = 38/464 (8%)
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
Y IF+ I + +N +IR++ +A+++F M PD Y++P +L+ACS
Sbjct: 89 YTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACS 148
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+ + IH V+KLG ++++ N L+ +Y L A+ + DE+ RD+VS N+
Sbjct: 149 VSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNS 208
Query: 183 LIDGYVKAG-------------------------------------DLAHARQLFDRMPF 205
++ GY + G ++ + + +F ++
Sbjct: 209 MVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKE 268
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
+ +SW ++A Y + EA+ L+ M ++PD +++ S L AC L G+ I
Sbjct: 269 KSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRI 328
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
H Y+E ++R + L L+D YAKCG + A +F+ +++ +W +M+ M G G
Sbjct: 329 HEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQG 388
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC 385
+ ++ F +M ++ PD + + L CSHAGLVDE R F+ M YG++ ++HY C
Sbjct: 389 KDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNC 447
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPED 445
M DLLGRAG I+EA + ++MPM + VW LL CR++ ++ IA AA+H+ +L PE
Sbjct: 448 MVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQ 507
Query: 446 GGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
G Y +L+++YA A RW+DV +R +++ IKK G S +++N
Sbjct: 508 SGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEIN 551
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 32/300 (10%)
Query: 50 ISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP 109
+ + ++ + D + Y +F + S S+N +I + + P AV L+ QM+ + P
Sbjct: 245 LPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEP 304
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D S +L AC L + L + IH V + ++ + N+L+ +Y L++A+ +F
Sbjct: 305 DAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVF 364
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
D++++RDVVS ++I + Y S Q ++A+
Sbjct: 365 DQMMFRDVVSWTSMI-------------------------------SAYGMSGQGKDAVA 393
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
LF M D PD IA VS L+AC+ G +++G+ + I +VD
Sbjct: 394 LFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLG 453
Query: 290 KCGYINTAIEIF-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+ G I+ A + + E N W ++L ++ ++L+ + + + G +L
Sbjct: 454 RAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVL 513
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 20/277 (7%)
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
L D+ L+ + L+ Y G+ + R +FD + ++ V + ++ Y + ++A
Sbjct: 62 LIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDA 121
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+ +F M + PDN L AC+ G L G IH + + ++ ++ GLV
Sbjct: 122 LLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSM 181
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y KC +++ A + + +++ +WN+M+ G A +G +L M + ++KPD T+
Sbjct: 182 YGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTM 241
Query: 348 LGALVGCSHAGL--VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
L ++ V + +F +++ K L + M + + EA+++ +
Sbjct: 242 GSLLPAVTNTSCDNVLYVKDMFVKLK-----EKSLISWNVMIAVYVNNAMPNEAVDLYLQ 296
Query: 406 MPMGG---DVFVWSGLLGGC----------RIHGNVE 429
M + G D S +L C RIH VE
Sbjct: 297 MQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVE 333
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 232/427 (54%), Gaps = 34/427 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + S+ ++ A T + A+ + ++M + P+ + +L AC
Sbjct: 172 ARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEM---DVTPNEVTLASVLVACGN 228
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + +H R +EL +++ N L
Sbjct: 229 LGTARAGKAVHGWYF------------------------RREKEL-------NLIVGNAL 257
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D YVK L AR++FD + RD VSW +++G Q + EA+++F M +KPD
Sbjct: 258 LDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDK 317
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ L + LSACA LG LE G+ +H YIE I D + T +VD Y KCG ++TA+ IF+
Sbjct: 318 VVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQE 377
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
KN+ +WNA++ G A+HG GR +L F RM+ + + P+ VT + L C H+GLV E
Sbjct: 378 MPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEG 437
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+LF+ M Y +S HYGCM DLLGRAGLI+EA ++IK MPM VF W LL C+
Sbjct: 438 RQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQ 497
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HG ++ ++ H+ +L+ G+Y +L+++YA +DRW DV K R ++ ++K G
Sbjct: 498 AHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGS 557
Query: 484 SLIQLNG 490
S+I++NG
Sbjct: 558 SVIEVNG 564
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 156/356 (43%), Gaps = 44/356 (12%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVS-----IPPDFYSFPFLLRACSQLCSHSLAQ-- 131
+N +I + T P A F+ + S PD Y+ P L+AC++L L +
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARL-GGGLREGC 138
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
H+ K GF+ V V N+L+ Y G
Sbjct: 139 QAHAVAEKAGFLGRVPVQNALVTFYGA-------------------------------CG 167
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
AR++FD M RD VSW L++ + + EA+ + M D+ P+ + L S L
Sbjct: 168 QCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEM---DVTPNEVTLASVLV 224
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
AC LG GK +H + + ++ + L+D Y KC ++ A +F+ +++ +
Sbjct: 225 ACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVS 284
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W M+ GL +L F+ M + +KPD V + L C+ G ++ R + + +E
Sbjct: 285 WTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIE 344
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
G+ ++ + D+ + G ++ A+ + ++MP+ +V W+ L+ G +HG
Sbjct: 345 R-KGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPL-KNVSSWNALINGFALHGR 398
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 114/292 (39%), Gaps = 33/292 (11%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+ L A +F+ + S+ +I P A+ +F+ M+ + PD +L
Sbjct: 265 EKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVL 324
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC+ L + + +H + + G DV V S++ +Y L A +F E+ ++V
Sbjct: 325 SACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVS 384
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N LI+G+ G A FDRM V+ G
Sbjct: 385 SWNALINGFALHGRGREALDCFDRM-----VASG-------------------------- 413
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTA 297
+ P+ + ++ L AC G +++G+ + + + G +VD + G I A
Sbjct: 414 LHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEA 473
Query: 298 IEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
++ ++ +FTW +L HG S + E +G+ +L
Sbjct: 474 YDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNGIYVL 525
>gi|293332303|ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays]
gi|238007354|gb|ACR34712.1| unknown [Zea mays]
Length = 464
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 234/433 (54%), Gaps = 14/433 (3%)
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
+P P S + RAH A+ +F M + PD + L AC S A
Sbjct: 1 MPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAA 60
Query: 131 ---------QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ +H+ ++ G + DVFV L+ VY + L ++ LFD + R VS N
Sbjct: 61 GMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWN 120
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD---LD 238
++ Y++ ++ A +LF MP RD VSW T++AGY+ + EA++L M+
Sbjct: 121 AMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCP 180
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ P+ + + L+ACA G LE G +H +++ N++ D L L+D Y KCG I A+
Sbjct: 181 VYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKAL 240
Query: 299 EIFESSQE-KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++FE + E ++L++W M+ GLAMHG +L F M + I PD VT++G L C+H
Sbjct: 241 QVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACAHC 300
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
GLVDE + F +E Y ++ +++HYGC+ DLLGR G ++EA +I+ M M + +W
Sbjct: 301 GLVDEGLRHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVIWGA 359
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
L C++H NVE+ E AA + +L P D +L+ +YA W + + RR ++ +I
Sbjct: 360 FLNACKVHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREMNNLQI 419
Query: 478 KKNAGCSLIQLNG 490
KK GCS I+L+G
Sbjct: 420 KKTPGCSSIELDG 432
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 216/375 (57%), Gaps = 9/375 (2%)
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE--ILYRDVV 178
C +L + LA H Q LK G + V N L+ +YC L DA+ +FD D
Sbjct: 129 CDRLAAAGLA---HGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAF 185
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S NT++ GY K GDL AR++F RMP R VSW ++ ++ + EA+++F MM
Sbjct: 186 SWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNG 245
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIE---LNQIRVDSFLSTGLVDFYAKCGYIN 295
+PD + L S L ACA LG LE+G+ +HR+++ L + + L T LVD Y KCG ++
Sbjct: 246 FRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMD 305
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A +F+ Q +++ WNAM+ GLAM+G G+ +L F RM++ P+ T + L C+
Sbjct: 306 EAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACT 365
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H G VDE +++F M +G+ +HYGC+ADLLGRAGL+EEA ++ MPM W
Sbjct: 366 HTGRVDEGKEIFRSM-CDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQW 424
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
L+ C +H NV + E + +++L+P+DGG Y VL ++YA WED +R+ ++
Sbjct: 425 GALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEER 484
Query: 476 KIKKNAGCSLIQLNG 490
KK G S I+ NG
Sbjct: 485 GAKKETGLSFIEWNG 499
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 129/326 (39%), Gaps = 43/326 (13%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F +P S++ +I A A+ +F QM PD +L+A
Sbjct: 200 LEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVLKA 259
Query: 121 CSQLCSHSLAQTIHS--QVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
C+ L + + +H + LG D V + +L+ +YC + +A +FD + +DV
Sbjct: 260 CAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQSQDV 319
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V N +I G G H ++ A++LF M+D+
Sbjct: 320 VLWNAMIGGLAMNG---HGKR----------------------------ALELFRRMLDM 348
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
P+ V L AC G +++GK I R + + I L D + G + A
Sbjct: 349 GFVPNESTFVVVLCACTHTGRVDEGKEIFRSMCDHGIEPRREHYGCLADLLGRAGLLEEA 408
Query: 298 IEI-FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG---VTILGALVG 353
+ + E + W A++ MH + ++IE ++PD +L L
Sbjct: 409 EAVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIE--LEPDDGGRYVVLFNLYA 466
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKE 379
+ GL ++A+ L ME G KE
Sbjct: 467 VN--GLWEDAKALRKMMEE-RGAKKE 489
>gi|414879991|tpg|DAA57122.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 868
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 248/436 (56%), Gaps = 6/436 (1%)
Query: 45 TTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT 104
++ P+ + + +T P AL +F+ P P + ++A++ PL A+ LF R
Sbjct: 418 SSTAPVPATARSSTPPSRTALKVFDQSPAP----WRAFLKAYSHGPFPLEALHLFKHARQ 473
Query: 105 VSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRD 164
+ D + F F+L+AC+ L H +H+ V++ GF +V +L++VY + L +
Sbjct: 474 -HLADDTFVFTFVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVE 532
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A+++FDE+ ++VVS N +I G+ G++ +AR LFD+MP R+ VSW L+ GY ++
Sbjct: 533 ARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLY 592
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
EA+ L +MM I P I +++ + A + LG + G+ ++ Y E I D+ + L
Sbjct: 593 AEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSL 652
Query: 285 VDFYAKCGYINTAIEIF-ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+D YAK G + ++++F E +NL +W +++ G AMHGL +L F+ M A IKP+
Sbjct: 653 IDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPN 712
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
+T L + CSH GLV++ F M Y + E+KH+GC+ D+LGRAG + EA ++I
Sbjct: 713 RITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQII 772
Query: 404 KKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWE 463
+ +PM +V VW LLG C +G V + E A + + L+ E GG + VL++V R+
Sbjct: 773 EGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFS 832
Query: 464 DVVKIRRSLDAGKIKK 479
D + R+ LD KI K
Sbjct: 833 DAEQARKLLDQRKIVK 848
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 250/458 (54%), Gaps = 15/458 (3%)
Query: 46 TFKPISSASSPTTDPLSYALSIFNNIPYPS--TFSYNTIIRAHTLFSSPLNAVVLFSQMR 103
++ + +A + L AL + + +P S SYNT+I + A+ +F+Q+
Sbjct: 97 SYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLA 156
Query: 104 ------TVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC 157
+ D ++ AC+ L + +H V+ G V + N+++ Y
Sbjct: 157 RDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYS 216
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
R+ DA+ LFD++ RD VS ++I GY +A L A Q+FD MP +DA++W L++G
Sbjct: 217 KAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISG 276
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
+ Q+ + E A++LF M + P ALVS L ACA++G + +GK +H +I I D
Sbjct: 277 HEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSD 336
Query: 278 S---FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
F+ L+D Y+KCG + A+ +F+ E+++ +WN+M+ G + +G G+ SL F R
Sbjct: 337 PFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFER 396
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M++ ++P VT L L CSHAGLV + R++ + M+ +GV +HY D LGR
Sbjct: 397 MLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNH 455
Query: 395 LIEEALEMIKKMPMG---GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
+EEA E IK + G W LLG C +HGN+EIAE AE + +L+PE+ G Y +
Sbjct: 456 QLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVM 515
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
L+++Y+ A +W+D ++R + ++K+ S I++
Sbjct: 516 LSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQ 553
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 157/369 (42%), Gaps = 43/369 (11%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
L RA S L +H+ ++K + N L+ +Y + + FD++
Sbjct: 32 LALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLP 91
Query: 174 YRDVVSCNTLIDGYVKA-GDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAIQL 230
+++ S N+L+ + G L A +L D MP R+ VS+ T+++ A+ + EA+++
Sbjct: 92 HKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRV 151
Query: 231 FCNMM------DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
F + + D +VSA SACA L + + +H + ++ + V ++ +
Sbjct: 152 FAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAM 211
Query: 285 VDFYAKCGYI-------------------------------NTAIEIFESSQEKNLFTWN 313
VD Y+K G + + A+++F+ ++ W
Sbjct: 212 VDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWT 271
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL--FDEME 371
A++ G +G ++L F RM + P ++ L C+ GLV +++ F
Sbjct: 272 ALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRR 331
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S+ + + + D+ + G + A+ + +M + D+ W+ ++ G +G + +
Sbjct: 332 SIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM-LERDIISWNSMVTGFSHNGQGKQS 390
Query: 432 EAAAEHVMK 440
A E ++K
Sbjct: 391 LAVFERMLK 399
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 237/425 (55%), Gaps = 4/425 (0%)
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
N +T S+ + I T A FS M + P+ +F LL C S S
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 129 --LAQTIHSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
L +H KLG + V V +++ +Y R + A+ +FD + ++ V+ NT+ID
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY+++G + +A ++FD+MP RD +SW ++ G+ + EEA+ F M +KPD +A
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+++AL+AC LG L G +HRY+ + + +S L+D Y +CG + A ++F + +
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++ + +WN+++VG A +G SLVYF +M E KPD VT GAL CSH GLV+E +
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F M+ Y +S ++HYGC+ DL RAG +E+AL++++ MPM + V LL C H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 426 G-NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
G N+ +AE +H+ L + Y +L+++YA +WE K+RR + +KK G S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 485 LIQLN 489
I+++
Sbjct: 449 SIEID 453
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 43/267 (16%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+ +I A++ F +M+ + PD+ + L AC+
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + S +H VL F +V V NSL+ +YC + A+++F + R VVS N++
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSV 278
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G+ AH E++ F M + KPD
Sbjct: 279 IVGFAANGN-AH------------------------------ESLVYFRKMQEKGFKPDA 307
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYINTA 297
+ AL+AC+ +G +E+G RY ++ ++ D +S LVD Y++ G + A
Sbjct: 308 VTFTGALTACSHVGLVEEGL---RYFQI--MKCDYRISPRIEHYGCLVDLYSRAGRLEDA 362
Query: 298 IEIFESSQEK-NLFTWNAMLVGLAMHG 323
+++ +S K N ++L + HG
Sbjct: 363 LKLVQSMPMKPNEVVIGSLLAACSNHG 389
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 251/513 (48%), Gaps = 78/513 (15%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ CK + + QIHA + G H +T ++ + F A
Sbjct: 58 LLSSCKHLNPLLQIHAQIIVSGF---KHHHSITHLINLYSLFHKCD-----------LAR 103
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
S+F++ P PS +N++IRA+T A+ ++ M
Sbjct: 104 SVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM----------------------- 140
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
V K G DVF+ L+ +Y L+ A+E+FD++ RDVV+ N +I
Sbjct: 141 -----------VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIA 189
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYA-------------------------- 219
G ++ D AR++FD+M +D VSWGT++AGYA
Sbjct: 190 GLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVII 249
Query: 220 ----QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
Q+ +EAI F M + P+++ VS L A A L +G H I
Sbjct: 250 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 309
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
++ + L+D YAKCG ++ + ++F K+ +WNAML G A+HG G ++ FS M
Sbjct: 310 SNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM 369
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
E++++ D V+ + L C HAGLV+E RK+F M Y + +L+HY CM DLLGRAGL
Sbjct: 370 QESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGL 429
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+E L IK MP+ D VW LLG CR+H NV++ E A +H++KL+P + + VL+ +
Sbjct: 430 FDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSI 489
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
YA + RW D K R ++ +KK GCS ++L
Sbjct: 490 YAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 522
>gi|223948849|gb|ACN28508.1| unknown [Zea mays]
gi|413937254|gb|AFW71805.1| hypothetical protein ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 248/443 (55%), Gaps = 14/443 (3%)
Query: 59 DPLSYALSIFNNIPYPST--FSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPP----DF 111
D L A +F+ +P S SYNT++ + + A+ + +++ R + P D
Sbjct: 113 DTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGLAMDR 172
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
++ + AC+ + + + +H V+ G V + N++++ Y R+ DA+ LFD+
Sbjct: 173 FTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQ 232
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+ RD V+ ++I GY + L A Q+FD MP +D ++W L++G+ Q+ + + A++LF
Sbjct: 233 VSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPDKDRIAWTALISGHEQNGEEDTALELF 292
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI---ELNQIRVDSFLSTGLVDFY 288
M+ + P LVSAL ACA+LG + +GK +H +I + + + F+ LVD Y
Sbjct: 293 EQMLAKGVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNALVDMY 352
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+KCG + A+ +F+ E++ +WN+M+ G + +GLG+ SL F M+ A ++P VT L
Sbjct: 353 SKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFL 412
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L CSH+GLV R + + ME +GV +HY D LGR +EEA E IK +P
Sbjct: 413 AVLTACSHSGLVSNGRLVLESMED-HGVEPRAEHYAAFIDALGRNHQLEEATEFIKDLPS 471
Query: 409 ---GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
G W LLG CR+HGN+E+AE AE + +L+P + G Y +++++YA A +W+D
Sbjct: 472 RIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFRLEPGNSGRYVMMSNIYAAAGQWDDA 531
Query: 466 VKIRRSLDAGKIKKNAGCSLIQL 488
++R + +KK+ S I++
Sbjct: 532 RRVRGLMKEKGLKKDQAYSWIEV 554
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 153/353 (43%), Gaps = 42/353 (11%)
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
P L RA S L + +H+ ++K + N L+ +Y A + F ++ +
Sbjct: 36 PLLERAISMGDVLHLGRAVHAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAFYDLPH 95
Query: 175 RDVVSCNTLIDGYVKAGD-LAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLF 231
++ S NTL+ ++ D L A +LFD MP R+ VS+ TL++ A + EA+++
Sbjct: 96 KNAHSYNTLLAALLRRPDTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVV 155
Query: 232 CNMM-DLDIKP----DNIALVSALSACARLGELEQGKNIH-------------------- 266
+ D + P D +VS +ACA +G + +H
Sbjct: 156 ARLARDRFLGPGLAMDRFTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLN 215
Query: 267 -----RYIE-----LNQIRV-DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
R +E +Q+ + D+ T ++ Y + ++ A+++F+ +K+ W A+
Sbjct: 216 AYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPDKDRIAWTAL 275
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL--FDEMESV 373
+ G +G +L F +M+ + P ++ AL C+ GLV ++L F ++
Sbjct: 276 ISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNI 335
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
V + + + D+ + G + A+ + MP D W+ ++ G +G
Sbjct: 336 GSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPE-RDFISWNSMVTGFSHNG 387
>gi|293336045|ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
gi|195615774|gb|ACG29717.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
gi|223946951|gb|ACN27559.1| unknown [Zea mays]
Length = 616
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 248/443 (55%), Gaps = 14/443 (3%)
Query: 59 DPLSYALSIFNNIPYPST--FSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPP----DF 111
D L A +F+ +P S SYNT++ + + A+ + +++ R + P D
Sbjct: 121 DTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGLAMDR 180
Query: 112 YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE 171
++ + AC+ + + + +H V+ G V + N++++ Y R+ DA+ LFD+
Sbjct: 181 FTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQ 240
Query: 172 ILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF 231
+ RD V+ ++I GY + L A Q+FD MP +D ++W L++G+ Q+ + + A++LF
Sbjct: 241 VSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPDKDRIAWTALISGHEQNGEEDTALELF 300
Query: 232 CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI---ELNQIRVDSFLSTGLVDFY 288
M+ + P LVSAL ACA+LG + +GK +H +I + + + F+ LVD Y
Sbjct: 301 EQMLAKGVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNALVDMY 360
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+KCG + A+ +F+ E++ +WN+M+ G + +GLG+ SL F M+ A ++P VT L
Sbjct: 361 SKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFL 420
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
L CSH+GLV R + + ME +GV +HY D LGR +EEA E IK +P
Sbjct: 421 AVLTACSHSGLVSNGRLVLESMED-HGVEPRAEHYAAFIDALGRNHQLEEATEFIKDLPS 479
Query: 409 ---GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
G W LLG CR+HGN+E+AE AE + +L+P + G Y +++++YA A +W+D
Sbjct: 480 RIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFRLEPGNSGRYVMMSNIYAAAGQWDDA 539
Query: 466 VKIRRSLDAGKIKKNAGCSLIQL 488
++R + +KK+ S I++
Sbjct: 540 RRVRGLMKEKGLKKDQAYSWIEV 562
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 153/353 (43%), Gaps = 42/353 (11%)
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILY 174
P L RA S L + +H+ ++K + N L+ +Y A + F ++ +
Sbjct: 44 PLLERAISMGDVLHLGRAVHAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAFYDLPH 103
Query: 175 RDVVSCNTLIDGYVKAGD-LAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLF 231
++ S NTL+ ++ D L A +LFD MP R+ VS+ TL++ A + EA+++
Sbjct: 104 KNAHSYNTLLAALLRRPDTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVV 163
Query: 232 CNMM-DLDIKP----DNIALVSALSACARLGELEQGKNIH-------------------- 266
+ D + P D +VS +ACA +G + +H
Sbjct: 164 ARLARDRFLGPGLAMDRFTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLN 223
Query: 267 -----RYIE-----LNQIRV-DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
R +E +Q+ + D+ T ++ Y + ++ A+++F+ +K+ W A+
Sbjct: 224 AYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPDKDRIAWTAL 283
Query: 316 LVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL--FDEMESV 373
+ G +G +L F +M+ + P ++ AL C+ GLV ++L F ++
Sbjct: 284 ISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNI 343
Query: 374 YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
V + + + D+ + G + A+ + MP D W+ ++ G +G
Sbjct: 344 GSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMP-ERDFISWNSMVTGFSHNG 395
>gi|255543449|ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547798|gb|EEF49290.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 480
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 203/348 (58%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ YA IF+ I P TF++N +IRA+ + A++L++ M PD ++FPF+++A
Sbjct: 80 VDYATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKA 139
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + + +H +K GF D F+ N+LM +Y L A++LFD++ R VVS
Sbjct: 140 CLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVVSW 199
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
T + G V G+L AR FD MP R+ VSW ++ GY ++ + +EA +LF M +++
Sbjct: 200 TTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVR 259
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ LV L AC LG LE G+ IH Y N +V FL T L+D Y+KCG I A ++
Sbjct: 260 PNGFTLVGLLRACTELGSLELGRRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKV 319
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE Q+K+L TWN+M+ L +HG G+ +L F++M EA ++PD +T +G L C + V
Sbjct: 320 FEEMQKKSLATWNSMITSLGVHGFGKEALALFAQMEEANVRPDAITFVGVLFACVNTNNV 379
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
+ + F M YG++ L+HY CM +L RA ++ E E++ MPM
Sbjct: 380 EAGYRYFKYMTEHYGITPMLEHYTCMIELYTRAAMLNEVSELVNSMPM 427
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 13/232 (5%)
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
+L Q K I + +Q+ V L L Y K Y A IF+ Q + FTWN M+
Sbjct: 49 KLVQAKIIRNNLSDDQLLVRKLLR--LCFSYQKVDY---ATLIFDQIQNPHTFTWNFMIR 103
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
+G + +L+ ++ MI PD T + C +D+ +++ G
Sbjct: 104 AYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKACLDHSALDKGKEVHG-FAIKTGFW 162
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
K+ + DL + G ++ A ++ KM + V W+ + G G ++ A AA +
Sbjct: 163 KDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRS-VVSWTTFVAGLVACGELDTARAAFDE 221
Query: 438 VMKLKPEDGGV-YKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
+ P V + + + Y R ++ ++ + + ++ N G +L+ L
Sbjct: 222 M----PMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPN-GFTLVGL 268
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 244/432 (56%), Gaps = 34/432 (7%)
Query: 61 LSYALSIFNNIPYP--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L A ++F +P P + S+ I+ A+ P+ A+ +FS MR + + PD+ + +L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVL 229
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A + L ++IH+ V+K+G EI ++
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGL----------------------------EIEPDLLI 261
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S NT+ Y K G +A A+ LFD+M + + W +++GYA++ EAI +F M++ D
Sbjct: 262 SLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD I++ SA+SACA++G LEQ ++++ Y+ + R D F+S+ L+D +AKCG + A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ + ++++ W+AM+VG +HG R ++ + M + P+ VT LG L+ C+H+G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V E F+ M + ++ + +HY C+ DLLGRAG +++A E+IK MP+ V VW L
Sbjct: 439 MVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+ H +VE+ E AA+ + + P + G Y L+++YA A W+ V ++R + +
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 479 KNAGCSLIQLNG 490
K+ GCS +++ G
Sbjct: 558 KDVGCSWVEVRG 569
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 219/420 (52%), Gaps = 50/420 (11%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
Q+ QIHA L GL F ++T +++A ++F I+ +A +F+++P P
Sbjct: 36 QLKQIHARLLVLGLQFSG--FLITKLIHASSSFGDIT-----------FARQVFDDLPRP 82
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
F +N IIR ++ + +A++++S M+ + PD ++FP LL+ACS L + + +H
Sbjct: 83 QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+QV +LGF DVFV N L+ +Y R L
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRR-------------------------------LG 171
Query: 195 HARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
AR +F+ +P R VSW +V+ YAQ+ + EA+++F +M +D+KPD +ALVS L+A
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNA 231
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
L +L+QG++IH + + ++ L L YAKCG + TA +F+ + NL W
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM-E 371
NAM+ G A +G R ++ F MI ++PD ++I A+ C+ G +++AR +++ +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S Y ++ + D+ + G +E A ++ + DV VWS ++ G +HG A
Sbjct: 352 SDY--RDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 259/482 (53%), Gaps = 45/482 (9%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
++ QIHA L + LS + +L+ + + + A P PL YA+++ + +
Sbjct: 30 SVAAAKQIHARALRAAGVPLSHPLLAKHLLFHLASLR----AGPP---PLLYAVTVLSCL 82
Query: 72 -PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
P P FS NT++R + P A+ L R PPD +++P LL+AC++L +
Sbjct: 83 LPDPDPFSLNTVLRIAASSAHPRIALALH---RRRLAPPDTHTYPPLLQACTRLLALREG 139
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+++H++ K G + VFV NSL+H Y A LF+
Sbjct: 140 ESLHAEAAKNGLVALVFVKNSLVHHY-------GACGLFES------------------- 173
Query: 191 GDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
A ++FD +P R+ VSW +++ G+A + + E + +F ++ D+ PD +VS
Sbjct: 174 -----AHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVS 228
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES-SQEK 307
L+ACA +G L G+ +H + + +S + L+D YAKCG + A ++FE +
Sbjct: 229 VLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVAR 288
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +W +++VGLA +G G+ +L F M R+ P +T++G L CSH GLVD+ + F
Sbjct: 289 TVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYF 348
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+EM+ YG++ ++H GCM DLLGRAG +EEA I MP+ + VW LLG C +H
Sbjct: 349 NEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKK 408
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+E+ EAA +++L P G Y +L+++YA RW D +R+++ ++KN G SL++
Sbjct: 409 LELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVE 468
Query: 488 LN 489
L
Sbjct: 469 LR 470
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 243/460 (52%), Gaps = 35/460 (7%)
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+ F+ +P+ + SYNT I + S P ++ LF +M+ P Y+ +L A +QL
Sbjct: 110 ATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLS 169
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH ++ F+ +VF+ N+L +Y + A+ LFD + +++VS N +I
Sbjct: 170 DLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMIS 229
Query: 186 GYVKAGD-----------------------------------LAHARQLFDRMPFRDAVS 210
GY K G + AR++F +D V
Sbjct: 230 GYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVC 289
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W ++ GYA++ + E+A+ LF M+ I+PD+ L S +S+CA+L L G+ +H
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
L + + +S+ L+D Y+KCG+I+ A +F +N+ +WNAM+VG A +G + +L
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M++ + KPD VT +G L C H +++ ++ FD + + +G++ L HY CM +LL
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLL 469
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
GR G IE+A+ +IK M D +WS LL C G++ AE AA H+ +L P Y
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+L+++YA+ RW+DV +R + + +KK AG S I+++
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDN 569
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 152/281 (54%), Gaps = 8/281 (2%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D F+ N L+H+Y F +LRDAQ LFD++L RD+ S N L+ Y K+G + + + FDRMP
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
FRD+VS+ T +AG++ + +E+++LF M +P +VS L+A A+L +L GK
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
IH I + + F+ L D YAKCG I A +F+ +KNL +WN M+ G A +G
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
+ +M + PD VT+ + G VDEAR++F E + K++ +
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFK-----EKDIVCWT 291
Query: 385 CMADLLGRAGLIEEALEMIKKM---PMGGDVFVWSGLLGGC 422
M + G E+AL + +M + D + S ++ C
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 238/430 (55%), Gaps = 1/430 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + +P + S+ T++ H + AV L+SQM P+ F +L A
Sbjct: 328 LEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGA 387
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + IH+Q LK+ +VFV ++L+ +YC +L DAQ +F + +++V
Sbjct: 388 CASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCW 447
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI GY + A +LF +MP R+ SW ++++GYAQ+ Q +A++ F M+
Sbjct: 448 NSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQS 507
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P I S L ACA L LE GK +H I I+ F+ T L D YAK G ++++ +
Sbjct: 508 PGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRV 567
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F ++N W AM+ GLA +G S++ F MI A I P+ T L L CSH+GLV
Sbjct: 568 FYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLV 627
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ A F+ M++ G+S + KHY CM D+L RAG + EA +++ K+ + W+ LL
Sbjct: 628 EHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLS 686
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C I+ N E+ E AA+ + +L ++ Y +L+++YA+ +W+D ++R + +KK+
Sbjct: 687 ACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKD 746
Query: 481 AGCSLIQLNG 490
GCS +Q+ G
Sbjct: 747 GGCSWVQIRG 756
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 185/398 (46%), Gaps = 34/398 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ ++ P S + +I L P +A+ +F +M + + P+ + +++AC
Sbjct: 198 AVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIG 257
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
LA +I +K + ++ V NSL+ +Y A+ +FDE+ RDVVS
Sbjct: 258 AGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTA 317
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y + GDL AR++ D MP R+ VSWGTLVA + Q +EA+ L+ M+ +P+
Sbjct: 318 LLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPN 377
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC----------- 291
S L ACA L +L G+ IH + F+S+ L+D Y KC
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 292 ---------------GYINT-----AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
GY N A E+F+ +N+ +WN+++ G A + +L
Sbjct: 438 SLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKS 497
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M+ + P +T L+ C+ ++ + + ++ + G+ + + ++D+
Sbjct: 498 FHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKL-GIKESIFVGTALSDMYA 556
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
++G ++ + + +MP DV W+ ++ G +G E
Sbjct: 557 KSGDLDSSKRVFYEMPKRNDV-AWTAMIQGLAENGFAE 593
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 139/336 (41%), Gaps = 39/336 (11%)
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A+ LFD + R VVS T++D +K G + A +L+ + P + ++AG+ ++
Sbjct: 167 ARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELP 226
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI------------------- 265
++A+ +F M+ + P+ I LVS + AC GE + +I
Sbjct: 227 KDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNS 286
Query: 266 --------------HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
R + ++R D T L+D YA+ G + A + + E+N +
Sbjct: 287 LITLYLRKGDADAARRMFDEMEVR-DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVS 345
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W ++ G + ++ +S+M+ +P+ L C+ + RK+ ++
Sbjct: 346 WGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTL 405
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ S + + D+ + + +A + +P ++ W+ L+ G N ++
Sbjct: 406 KM-ACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ-KNIVCWNSLISG--YSNNSKMV 461
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
E A E K+ + + + YA ++ D +K
Sbjct: 462 E-AEELFKKMPARNVASWNSIISGYAQNRQFIDALK 496
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 243/460 (52%), Gaps = 35/460 (7%)
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+ F+ +P+ + SYNT I + S P ++ LF +M+ P Y+ +L A +QL
Sbjct: 110 ATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLL 169
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH ++ F+ +VF+ N+L +Y + A+ LFD + +++VS N +I
Sbjct: 170 DLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMIS 229
Query: 186 GYVKAGD-----------------------------------LAHARQLFDRMPFRDAVS 210
GY K G + AR++F +D V
Sbjct: 230 GYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVC 289
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W ++ GYA++ + E+A+ LF M+ I+PD+ L S +S+CA+L L G+ +H
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
L + + +S+ L+D Y+KCG+I+ A +F +N+ +WNAM+VG A +G + +L
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M++ + KPD VT +G L C H +++ ++ FD + + +G++ L HY CM +LL
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLL 469
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
GR G IE+A+ +IK M D +WS LL C G++ AE AA H+ +L P Y
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+L+++YA+ RW+DV +R + + +KK AG S I+++
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDN 569
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 151/281 (53%), Gaps = 8/281 (2%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
D F+ N L+H+Y F +LRDAQ LFD++L RD S N L+ Y K+G + + + FDRMP
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
FRD+VS+ T +AG++ + +E+++LF M +P +VS L+A A+L +L GK
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGL 324
IH I + + F+ L D YAKCG I A +F+ +KNL +WN M+ G A +G
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236
Query: 325 GRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG 384
+ +M + PD VT+ + G VDEAR++F E + K++ +
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFK-----EKDIVCWT 291
Query: 385 CMADLLGRAGLIEEALEMIKKM---PMGGDVFVWSGLLGGC 422
M + G E+AL + +M + D + S ++ C
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 228/395 (57%), Gaps = 4/395 (1%)
Query: 99 FSQMRTVSIPPDFYSFPFLLRACSQLCSHS--LAQTIHSQVLKLGF-ICDVFVLNSLMHV 155
FS MR I P+ +F LL AC S S L+ +H KLG V V +++ +
Sbjct: 56 FSDMRLAGIEPNHITFISLLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGM 115
Query: 156 YCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLV 215
Y +R A+ +FD + ++ V+ NT+IDGY++ G + +A ++FD MP RD +SW ++
Sbjct: 116 YSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMI 175
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
G+ + EEA+ F M + PD +A+++AL+AC LG L G HRY+ R
Sbjct: 176 TGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFR 235
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ +S L+D Y +CG + A ++F++ +++ + +WN+++VG A +G SLVYF +M
Sbjct: 236 NNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKM 295
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
E KPD VT GAL CSH GLV+E + F M++ Y +S ++H+GC+ DL RAG
Sbjct: 296 QEEGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGR 355
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI-AEAAAEHVMKLKPEDGGVYKVLAD 454
+E+A+++++ MPM + V LL CR HGN I AE +H+ L + Y +L++
Sbjct: 356 LEDAIKVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSN 415
Query: 455 VYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+YA +WE K+RR + +KK G S I+++
Sbjct: 416 MYAADGKWEGASKMRRKMKGLGLKKQPGYSSIEID 450
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 37/264 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ +F+ +P S+ +I A+ F +M+ + PD+ + L AC+
Sbjct: 156 AVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALAACTN 215
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + S H V+ F +V V NSL+ +YC + A+++FD + R VVS N++
Sbjct: 216 LGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTVVSWNSV 275
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+A + E++ F M + KPD
Sbjct: 276 I-------------------------------VGFAANGNANESLVYFRKMQEEGFKPDA 304
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ AL+AC+ +G +E+G + ++ + R++ F LVD Y++ G + AI++
Sbjct: 305 VTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEHF--GCLVDLYSRAGRLEDAIKV 362
Query: 301 FESSQEK-NLFTWNAMLVGLAMHG 323
ES K N ++L HG
Sbjct: 363 VESMPMKPNEVVIGSLLAACRNHG 386
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 137/349 (39%), Gaps = 101/349 (28%)
Query: 209 VSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC--------------- 253
VSW + + ++ D+ EA + F +M I+P++I +S LSAC
Sbjct: 34 VSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGSEALSDLLH 93
Query: 254 -----------------------ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
++ G + + + + Y+E +S ++D Y +
Sbjct: 94 GYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDK----NSVTWNTMIDGYMR 149
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
G ++ A+++F+ E++L +W AM+ G G +L +F M + + PD V I+ A
Sbjct: 150 NGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAA 209
Query: 351 LVGCSH-----------------------------------AGLVDEARKLFDEMESVYG 375
L C++ G V+ AR++FD ME
Sbjct: 210 LAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTV 269
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCRIHGNVEIAE 432
VS G A+ G E+L +KM G D ++G L C +V + E
Sbjct: 270 VSWNSVIVGFAAN-----GNANESLVYFRKMQEEGFKPDAVTFTGALTAC---SHVGLVE 321
Query: 433 AAAEHVMKLKPEDGGVYKV---------LADVYANADRWEDVVKIRRSL 472
++ +K + Y++ L D+Y+ A R ED +K+ S+
Sbjct: 322 EGFQYFQMMKTD----YRISPRIEHFGCLVDLYSRAGRLEDAIKVVESM 366
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 33/418 (7%)
Query: 77 FSYNTIIRAHTLFSSP---LNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC-SHSLAQT 132
F NT+IR H P A F M ++ P+ ++FPFLL++C+ L S +
Sbjct: 98 FLVNTLIRTHVTSPFPSARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVGLQ 157
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
H+ LK GF D +V N+L+H+Y F AG
Sbjct: 158 AHAAALKFGFAADHYVSNTLIHMYSCF-----------------------------GAGF 188
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
L AR +F+RMP AV+W ++ GY ++ +A+ LF M ++PD + ++ L+A
Sbjct: 189 LGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAA 248
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
A LG LE + + R++E I L L+D AKCG ++ A+ +FE +E+ + +W
Sbjct: 249 AADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSW 308
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
+++ LAM G G+ ++ F M + PD V +G L CSHAG+VDE R FD M++
Sbjct: 309 TSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKT 368
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
YG+ +++HYGCM D+ GRAG++E+ LE ++ MPM + +W L+ CR HG +E+ E
Sbjct: 369 EYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGE 428
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ +++ P Y +L++VYA RW++ +IRR + IKK GCSL++L+G
Sbjct: 429 SITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDG 486
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 39/273 (14%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A ++F +P S +++ +I + +AVVLF M+ + PD
Sbjct: 189 LGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPD---------- 238
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+V +G + L +L V + + E + + V C
Sbjct: 239 ---------------EVTVIGVLAAAADLGALELTRWV------GRFVEREGIGKSVTLC 277
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LID K GD+ A +F+ M R VSW +++ A + +EA+ +F M + +
Sbjct: 278 NALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVL 337
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTA 297
PD++A + L+AC+ G +++G+ ++ + +++ + +VD + + G +
Sbjct: 338 PDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHY--GCMVDMFGRAGMVEQG 395
Query: 298 IEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSL 329
+E + K N W ++ H GRL L
Sbjct: 396 LEFVRAMPMKPNPIIWRTLVAACRAH--GRLEL 426
>gi|225445120|ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Vitis vinifera]
gi|297738768|emb|CBI28013.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 222/415 (53%), Gaps = 33/415 (7%)
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
YP+ F +N IIR++T + A+ ++ M + PD Y+ P +L+A Q + +
Sbjct: 91 YPAPFQWNNIIRSYTRLEAHHYALSIYIAMSRAGVSPDSYTIPIVLKAVCQAFATGFGRQ 150
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+HS ++ G ++ YC + I Y KAG+
Sbjct: 151 VHSVAIRHGL---------ELNEYCE----------------------SGFISVYSKAGE 179
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+A ++F++ FR SW ++ G +Q + +EA+ +F M +PD + +VS SA
Sbjct: 180 FQNAHKVFEQNRFRKLGSWNAIIGGLSQGGRAKEAVTMFMEMRKCGFEPDEVTMVSVTSA 239
Query: 253 CARLGELEQGKNIHR--YIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
C LG L+ +H+ Y R D+ LVD Y KCG ++ A +F E N+
Sbjct: 240 CGSLGHLDLALQLHKCVYQAKTSERSDTLTLNSLVDMYGKCGRMDLAYRVFSRMDEPNVS 299
Query: 311 TWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+W +M+VG AMHG +L F M EA ++P+ VT +G L C H G V E + FD M
Sbjct: 300 SWTSMIVGYAMHGQLYDALECFRCMREAGVRPNHVTFIGVLSACVHGGAVQEGKYYFDMM 359
Query: 371 ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI 430
+ YG+ ++HYGCM DLLGRAGL+EEA +M+++MPM +V VW L+G C +GNV++
Sbjct: 360 TTAYGLVPRMQHYGCMVDLLGRAGLLEEARKMVERMPMKANVIVWGCLMGACEKYGNVKM 419
Query: 431 AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
E AEH+++L+P + GV+ VL+++YA+ W +V ++R + K+ K SL
Sbjct: 420 GEWVAEHLLELEPWNDGVFVVLSNIYASRGLWREVERVRGVMKERKLDKVPAYSL 474
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 130/320 (40%), Gaps = 39/320 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F + S+N II + AV +F +MR PD + + AC
Sbjct: 183 AHKVFEQNRFRKLGSWNAIIGGLSQGGRAKEAVTMFMEMRKCGFEPDEVTMVSVTSACGS 242
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L LA +H CV+ + D ++ N+L
Sbjct: 243 LGHLDLALQLHK---------------------CVYQAKTSERS--------DTLTLNSL 273
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K G + A ++F RM + SW +++ GYA Q +A++ F M + ++P++
Sbjct: 274 VDMYGKCGRMDLAYRVFSRMDEPNVSSWTSMIVGYAMHGQLYDALECFRCMREAGVRPNH 333
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
+ + LSAC G +++GK + V G +VD + G + A ++ E
Sbjct: 334 VTFIGVLSACVHGGAVQEGKYYFDMMTTAYGLVPRMQHYGCMVDLLGRAGLLEEARKMVE 393
Query: 303 SSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
K N+ W ++ +G ++ ++E DGV ++ + + S
Sbjct: 394 RMPMKANVIVWGCLMGACEKYGNVKMGEWVAEHLLELEPWNDGVFVVLSNIYAS------ 447
Query: 362 EARKLFDEMESVYGVSKELK 381
R L+ E+E V GV KE K
Sbjct: 448 --RGLWREVERVRGVMKERK 465
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 231/429 (53%), Gaps = 13/429 (3%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ + S+N II AH + LF M I PD ++F +L+A
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ S IHS ++K G + V SL+ +Y + +A+++ R VS
Sbjct: 493 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS- 550
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
G + ++ ++ VSW ++++GY +Q E+A LF MM++ I
Sbjct: 551 ----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + L CA L GK IH + +++ D ++ + LVD Y+KCG ++ + +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE S ++ TWNAM+ G A HG G ++ F RMI IKP+ VT + L C+H GL+
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F M+ YG+ +L HY M D+LG++G ++ ALE+I++MP D +W LLG
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Query: 421 GCRIH-GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C IH NVE+AE A +++L P+D Y +L++VYA+A WE V +RR++ K+KK
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 840
Query: 480 NAGCSLIQL 488
GCS ++L
Sbjct: 841 EPGCSWVEL 849
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 98 LFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC 157
+Q+ +VS +F F+ + C++ + L + H+ ++ GF FVLN L+ VY
Sbjct: 39 FLNQVNSVSTT----NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYT 94
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
A +FD++ RDVVS N +I+GY K+ D+ A F+ MP RD VSW ++++G
Sbjct: 95 NSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSG 154
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
Y Q+ + ++I++F +M I+ D L C+ L + G IH + D
Sbjct: 155 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 214
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
++ L+D YAK ++ +F+ EKN +W+A++ G + L L+L +F M
Sbjct: 215 VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 272
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 180/433 (41%), Gaps = 63/433 (14%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS-----PTTDPLSY--------- 63
Q HAH + G F +L +L T + SAS P D +S+
Sbjct: 69 QAHAHMIISG--FRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 64 ------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
A S FN +P S+N+++ + L ++ +F M I D +F +
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ CS L SL IH V+++G CD DV
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVG--CDT-----------------------------DV 215
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V+ + L+D Y K + ++F +P +++VSW ++AG Q++ A++ F M +
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ S L +CA L EL G +H + + D + T +D YAKC + A
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 335
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F++S+ N ++NAM+ G + G +L+ F R++ + + D +++ G C+
Sbjct: 336 QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV 395
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIEEALEMIKKMPMGGDVF 413
+ E +++ + L C+A D+ G+ + EA + +M D
Sbjct: 396 KGLSEGLQIYG-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAV 449
Query: 414 VWSGLLGGCRIHG 426
W+ ++ +G
Sbjct: 450 SWNAIIAAHEQNG 462
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 181/452 (40%), Gaps = 78/452 (17%)
Query: 7 IKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ C + ++ Q+HAH L T +YA D +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA-------------KCDNMQD 334
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+N + SYN +I ++ A++LF ++ + + D S + RAC+
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S I+ +K DV V N+ + +Y L +A +FDE+ RD
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD------- 447
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
AVSW ++A + Q+ + E + LF +M+ I+PD
Sbjct: 448 ------------------------AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA------ 297
S L AC G L G IH I + + +S + L+D Y+KCG I A
Sbjct: 484 FTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 298 ----------IEIFESSQEKNL----FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+E E K L +WN+++ G M + + F+RM+E I PD
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH--YGC--MADLLGRAGLIEEA 399
T L C++ +++ ++ + KEL+ Y C + D+ + G + ++
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQV-----IKKELQSDVYICSTLVDMYSKCGDLHDS 657
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
M +K + D W+ ++ G HG E A
Sbjct: 658 RLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 688
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 145/341 (42%), Gaps = 43/341 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+L +F IP ++ S++ II + A+ F +M+ V+ + +LR+C+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L L +H+ LK F D +V TL
Sbjct: 294 LSELRLGGQLHAHALKSDFAAD------------------------------GIVRTATL 323
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
D Y K ++ A+ LFD + S+ ++ GY+Q + +A+ LF +M + D
Sbjct: 324 -DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I+L ACA + L +G I+ + + +D ++ +D Y KC + A +F+
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA----GL 359
+ ++ +WNA++ +G G +L F M+ +RI+PD T L C+ G+
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGM 502
Query: 360 VDEARKLFDEMESVYGVSKELKHYGC-MADLLGRAGLIEEA 399
+ + M S V GC + D+ + G+IEEA
Sbjct: 503 EIHSSIVKSGMASNSSV-------GCSLIDMYSKCGMIEEA 536
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 263/521 (50%), Gaps = 49/521 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I CK + +HA L +G+L + + S SS P Y+
Sbjct: 34 SLIHACKDTASLRHVHAQILRRGVL-------------SSRVAAQLVSCSSLLKSP-DYS 79
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
LSIF N + F N +IR T + ++V F M + + PD +FPF+L++ S+L
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL 139
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE------------- 171
L + +H+ LK CD FV SL+ +Y +L+ A ++F+E
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 172 -----------------ILYRDVVSCN-----TLIDGYVKAGDLAHARQLFDRMPFRDAV 209
L+R + N TLI GYV +G+L A+QLF+ MP ++ V
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW TL+ G++Q+ E AI + M++ +KP+ + + LSAC++ G L G IH YI
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
N I++D + T LVD YAKCG ++ A +F + K++ +W AM+ G A+HG ++
Sbjct: 320 LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAI 379
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F +M+ + KPD V L L C ++ VD FD M Y + LKHY + DL
Sbjct: 380 QCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDL 439
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
LGRAG + EA E+++ MP+ D+ W+ L C+ H AE+ ++++++L PE G Y
Sbjct: 440 LGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSY 499
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
L +A+ +DV K R SL +++ G S I+L+G
Sbjct: 500 IFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDG 540
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 168/386 (43%), Gaps = 74/386 (19%)
Query: 90 SSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVL 149
SSP A + F R S PD F L+ AC S + +H+Q+L+ G VL
Sbjct: 12 SSP--AKIYFPADRQAS--PDESHFISLIHACKDTAS---LRHVHAQILRRG------VL 58
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
+S R A +L VSC++L+ K+ D ++ +F R+
Sbjct: 59 SS-----------RVAAQL---------VSCSSLL----KSPD--YSLSIFRNSEERNPF 92
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
L+ G ++ + E +++ F M+ L +KPD + L + ++LG G+ +H
Sbjct: 93 VLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAAT 152
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS----QEKNLFTWNAMLVGLAMHGLG 325
N + DSF+ LVD YAK G + A ++FE S +++++ WN ++ G
Sbjct: 153 LKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDM 212
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC 385
++ F M E R T++ V +G ++ A++LF+ M K + +
Sbjct: 213 HMATTLFRSMPE-RNSGSWSTLIKGYVD---SGELNRAKQLFELMP-----EKNVVSWTT 263
Query: 386 MADLLGRAGLIEEAL----EMIKKMPMGGDVFVW--------SGLLG-GCRIHGNVEIAE 432
+ + + G E A+ EM++K + + SG LG G RIHG +
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI---- 319
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYAN 458
++ +KL D + L D+YA
Sbjct: 320 --LDNGIKL---DRAIGTALVDMYAK 340
>gi|356567046|ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Glycine max]
Length = 505
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 253/494 (51%), Gaps = 50/494 (10%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + C+++ Q+ QI A GL +L+ ++Y + SP+ + L +A
Sbjct: 21 SLLNSCRSMDQLRQIQAQVHVSGLY--QDTRVLSELVYFCSL--------SPSKN-LRHA 69
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
S ++ PS S+N +IR + SPL A +F +MR P+ +FPFLL++C+
Sbjct: 70 RSFVHHAATPSPISWNILIRGYAASDSPLEAFWVFRKMRERGAMPNKLTFPFLLKSCAVA 129
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ + +H+ +K G DV+V N+L++ Y ++ DA+++F E+
Sbjct: 130 SALFEGKQVHADAVKCGLDSDVYVGNNLINFYGCCKKIVDARKVFGEM------------ 177
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
P R VSW +++ +S + I F M +PD
Sbjct: 178 -------------------PERTVVSWNSVMTACVESLWLGDGIGYFFRMWGCGFEPDET 218
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
++V LSACA LG L G+ +H + L + + L T LVD Y K G + A ++FE
Sbjct: 219 SMVLLLSACAELGYLSLGRWVHSQLVLRGMVLSVQLGTALVDMYGKSGALGYARDVFERM 278
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-----IKPDGVTILGALVGCSHAGL 359
+ +N++TW+AM++GLA HG G +L F+ M I+P+ VT LG L CSHAG+
Sbjct: 279 ENRNVWTWSAMILGLAQHGFGEEALELFAIMNNNNNDNRDIRPNYVTYLGVLCACSHAGM 338
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDE + F +ME V+G+ + HYG M D+LGRAG +EEA E I+ MP+ D VW LL
Sbjct: 339 VDEGYQYFHDMECVHGIKPLMTHYGAMVDVLGRAGRLEEAYEFIQSMPIEPDPVVWRTLL 398
Query: 420 GGCR---IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
C +H + I E ++ ++ +P GG ++A++YA WE+ +RR + G
Sbjct: 399 SACTVHDVHDHTGIGERVSKKLLLKEPRRGGNLVIVANMYAEVGMWEEAANVRRVMRDGG 458
Query: 477 IKKNAGCSLIQLNG 490
+KK AG S + L G
Sbjct: 459 MKKVAGESCVDLGG 472
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 230/424 (54%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+S A+ IF P +N++I + + A L ++M+ + D + +L A
Sbjct: 255 MSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSA 314
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS + A+ +H V K+G I V V ++ + Y DA +LF E+ D V
Sbjct: 315 CSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLL 374
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N++I Y G + A+ +F+ MP + +SW +++ G AQ+ EA+ +F M LD++
Sbjct: 375 NSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLR 434
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D +L S +SACA + LE G+ + + + D +ST LVDFY KCG+I ++
Sbjct: 435 MDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKL 494
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+S + + +WN+ML+G A +G G +L F+ M +A ++P +T G L C H GLV
Sbjct: 495 FDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLV 554
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E RK F+ M+ Y + ++HY CM DL RAG ++EAL +++ MP D +WS +L
Sbjct: 555 EEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLR 614
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GC HG+ ++ + A+ +++L PE Y L+ ++A + WE +R+ + ++KK+
Sbjct: 615 GCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGDWESSALVRKIMTEKQVKKH 674
Query: 481 AGCS 484
G S
Sbjct: 675 PGFS 678
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 130/258 (50%), Gaps = 44/258 (17%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYC-VFHRLRDAQE 167
+ S LL++ + S + +H LK G I V + N L+ +Y + DA
Sbjct: 4 ELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHN 63
Query: 168 LFDEILYRDVVSCNTLIDGYV-------------------------------KAGDLAHA 196
LFDE+ R+ S NT+I+GY+ KAG+L A
Sbjct: 64 LFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVA 123
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP------DNIALVSAL 250
++LF+ MP R+ V+W +++ GYA++ EA+ LF +L+ P D L S +
Sbjct: 124 KKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLF---KELNSNPLEKSCGDTFVLASVI 180
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLF 310
ACA LG +E GK +H I ++ + +DS L + L++ YAKCG+++TA + + E + F
Sbjct: 181 GACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDF 240
Query: 311 TWNAMLVGLAMHGLGRLS 328
+ +A+++G A GR+S
Sbjct: 241 SLSALIMGYA--NCGRMS 256
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 176/408 (43%), Gaps = 52/408 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP---DFYSFPFL 117
L A +FN +P + ++N++I + AV LF ++ + + D + +
Sbjct: 120 LDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASV 179
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQ---ELFDEILY 174
+ AC+ L + + +H+++L D +++SL+++Y L A ++ DE+
Sbjct: 180 IGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEV-- 237
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
D S + LI GY G ++ A ++F V W +L++GY + + +A L M
Sbjct: 238 -DDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEM 296
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYI------------------------- 269
+ ++ D+ + LSAC+ G + K +H Y+
Sbjct: 297 KNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNP 356
Query: 270 -----ELNQIRV-DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
++++ D+ L ++ Y CG I A IFE+ K+L +WN+++VGLA +
Sbjct: 357 NDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNA 416
Query: 324 LGRLSLVYFSRMIEARIKPDGVTILGALVGCS-----HAGLVDEARKLFDEMESVYGVSK 378
+L F +M + ++ D ++ + C+ G AR + +ES VS
Sbjct: 417 YPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVST 476
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
L + C + G IE ++ M + D W+ +L G +G
Sbjct: 477 SLVDFYC------KCGFIENGRKLFDSM-IKTDEVSWNSMLMGYATNG 517
>gi|147846621|emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
Length = 496
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 205/318 (64%), Gaps = 1/318 (0%)
Query: 134 HSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
H++++ +C DV N++++ Y + ++ +A+ LFDE+ R++VS N+++ G+VK G+
Sbjct: 83 HARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSXNSMLXGFVKCGN 142
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ A LF MP RD VSW +++A YAQ + EA+ LF M + +KP +VS LSA
Sbjct: 143 VEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVKPSEATVVSLLSA 202
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CA LG L++G ++H YI N+I V+S + T LVD YAKCG I+ A ++F + + K++ W
Sbjct: 203 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 262
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
N ++ G+A+ G + + F M EA ++P+ +T + L CSHAG+VDE +KL D M S
Sbjct: 263 NTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSS 322
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
YG+ +++HYGC+ DLL RAGL+EEA+E+I MPM + LLGGCRIHGN E+ E
Sbjct: 323 SYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFELGE 382
Query: 433 AAAEHVMKLKPEDGGVYK 450
+ ++ L+P G K
Sbjct: 383 MVGKRLINLQPCQSGRLK 400
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 156/327 (47%), Gaps = 56/327 (17%)
Query: 113 SFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
++PF+++AC++ +H+ V K GF CD ++++SL+H+Y L A++LF+
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHV-KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 60
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
RD+VS N +IDGYVK G++ HAR +FDRM RD +SW T++ GYA + +EA +LF
Sbjct: 61 SDRDLVSWNAMIDGYVKRGEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLF- 119
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
D P E N + +S L + KCG
Sbjct: 120 -----DEMP----------------------------ERNLVSXNSMLXG-----FVKCG 141
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
+ A +F +++ +WN+ML A G +L F +M +KP T++ L
Sbjct: 142 NVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVKPSEATVVSLLS 201
Query: 353 GCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
C+H G +D+ L E+ S+ G + + D+ + G I A ++
Sbjct: 202 ACAHLGALDKGLHLHTYINDNRIEVNSIVGTA--------LVDMYAKCGKISLATQVFNA 253
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAE 432
M DV W+ ++ G I G+V+ A+
Sbjct: 254 ME-SKDVLAWNTIIAGMAILGHVKEAQ 279
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 122/277 (44%), Gaps = 37/277 (13%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+N+++ + P A+ LF QM V + P + LL AC+
Sbjct: 146 AFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVKPSEATVVSLLSACAH 205
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H+ + + V +L+ +Y ++ A ++F+ + +DV++ NT+
Sbjct: 206 LGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTI 265
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G G + A+QLF M + ++P++
Sbjct: 266 IAGMAILGHVKEAQQLFKEMK-------------------------------EAGVEPND 294
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEI 300
I V+ LSAC+ G +++G+ + + + + +V+ + ++D A+ G + A+E+
Sbjct: 295 ITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY--GCVIDLLARAGLLEEAMEL 352
Query: 301 FES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
+ E N A+L G +HG L + R+I
Sbjct: 353 IGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLI 389
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 231/431 (53%), Gaps = 13/431 (3%)
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
L+ A +F+ + S+N II AH + LF M I PD ++F +L+
Sbjct: 390 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 449
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
AC+ S IHS ++K G + V SL+ +Y + +A+++ R VS
Sbjct: 450 ACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 508
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
G + ++ ++ VSW ++++GY +Q E+A LF MM++ I
Sbjct: 509 -----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 557
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + L CA L GK IH + +++ D ++ + LVD Y+KCG ++ +
Sbjct: 558 TPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRL 617
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+FE S ++ TWNAM+ G A HG G ++ F RMI IKP+ VT + L C+H GL
Sbjct: 618 MFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGL 677
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
+D+ + F M+ YG+ +L HY M D+LG++G ++ ALE+I++MP D +W LL
Sbjct: 678 IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737
Query: 420 GGCRIH-GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
G C IH NVE+AE A +++L P+D Y +L++VYA+A WE V +RR++ K+K
Sbjct: 738 GVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLK 797
Query: 479 KNAGCSLIQLN 489
K GCS ++L
Sbjct: 798 KEPGCSWVELK 808
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 180/434 (41%), Gaps = 63/434 (14%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS-----PTTDPLSY--------- 63
Q HAH + G F +L +L T + SAS P D +S+
Sbjct: 27 QAHAHMIISG--FRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 84
Query: 64 ------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
A S FN +P S+N+++ + L ++ +F M I D +F +
Sbjct: 85 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 144
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ CS L SL IH V+++G CD DV
Sbjct: 145 LKVCSFLEDTSLGMQIHGIVVRVG--CDT-----------------------------DV 173
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V+ + L+D Y K + ++F +P +++VSW ++AG Q++ A++ F M +
Sbjct: 174 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 233
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ S L +CA L EL G +H + + D + T +D YAKC + A
Sbjct: 234 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 293
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F++S+ N ++NAM+ G + G +L+ F R++ + + D +++ G C+
Sbjct: 294 QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV 353
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIEEALEMIKKMPMGGDVF 413
+ E +++ + L C+A D+ G+ + EA + +M D
Sbjct: 354 KGLSEGLQIYG-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAV 407
Query: 414 VWSGLLGGCRIHGN 427
W+ ++ +G
Sbjct: 408 SWNAIIAAHEQNGK 421
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%)
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C++ + L + H+ ++ GF FVLN L+ VY A +FD++ RDVVS
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I+GY K+ D+ A F+ MP RD VSW ++++GY Q+ + ++I++F +M I+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D L C+ L + G IH + D ++ L+D YAK ++ +
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
F+ EKN +W+A++ G + L L+L +F M
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 230
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 181/452 (40%), Gaps = 78/452 (17%)
Query: 7 IKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ C + ++ Q+HAH L T +YA D +
Sbjct: 246 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA-------------KCDNMQD 292
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+N + SYN +I ++ A++LF ++ + + D S + RAC+
Sbjct: 293 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 352
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S I+ +K DV V N+ + +Y L +A +FDE+ RD
Sbjct: 353 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD------- 405
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
AVSW ++A + Q+ + E + LF +M+ I+PD
Sbjct: 406 ------------------------AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 441
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA------ 297
S L AC G L G IH I + + +S + L+D Y+KCG I A
Sbjct: 442 FTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 500
Query: 298 ----------IEIFESSQEKNL----FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+E E K L +WN+++ G M + + F+RM+E I PD
Sbjct: 501 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 560
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH--YGC--MADLLGRAGLIEEA 399
T L C++ +++ ++ + KEL+ Y C + D+ + G + ++
Sbjct: 561 KFTYATVLDTCANLASAGLGKQIHAQV-----IKKELQSDVYICSTLVDMYSKCGDLHDS 615
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
M +K + D W+ ++ G HG E A
Sbjct: 616 RLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 646
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 43/341 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+L +F IP ++ S++ II + A+ F +M+ V+ + +LR+C+
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L L +H+ LK F D V +
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTAT------------------------------- 280
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K ++ A+ LFD + S+ ++ GY+Q + +A+ LF +M + D
Sbjct: 281 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 340
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I+L ACA + L +G I+ + + +D ++ +D Y KC + A +F+
Sbjct: 341 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 400
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA----GL 359
+ ++ +WNA++ +G G +L F M+ +RI+PD T L C+ G+
Sbjct: 401 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGM 460
Query: 360 VDEARKLFDEMESVYGVSKELKHYGC-MADLLGRAGLIEEA 399
+ + M S V GC + D+ + G+IEEA
Sbjct: 461 EIHSSIVKSGMASNSSV-------GCSLIDMYSKCGMIEEA 494
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 246/439 (56%), Gaps = 21/439 (4%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P +T S+N ++ + A +F +M ++ S+ ++R Q
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNV----VSWTAMIRGYVQ 68
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A+ + ++ + + +L L+ R+ +A++LFD + +DVV+ +
Sbjct: 69 EGLIEEAELLFWRMPERNVVSWTVMLGGLIED----GRVDEARQLFDMMPVKDVVASTNM 124
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG-------------YAQSDQCEEAIQL 230
IDG G L AR++FD MP R+ V+W ++++G Y + EA+ L
Sbjct: 125 IDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALAL 184
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
F M ++P +++S LS C L L+ G+ +H + +Q +D ++S+ L+ Y K
Sbjct: 185 FSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIK 244
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
CG + TA +F+ K++ WN+++ G A HG G +L F M + I PD +T +G
Sbjct: 245 CGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGV 304
Query: 351 LVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
L CS+ G V E ++F+ M+S Y V + +HY CM DLLGRAG + EA+ +I+ MP+
Sbjct: 305 LSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEA 364
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRR 470
D VW LLG CR H N+++AE AA+ +++L+P + G Y +L+++Y++ RW+DVV++R+
Sbjct: 365 DAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRK 424
Query: 471 SLDAGKIKKNAGCSLIQLN 489
++ A ++K+ GCS I+++
Sbjct: 425 TMRAKNLRKSPGCSWIEVD 443
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 153 MHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
M Y R R+A++LFD++ + +S N L+ GYV+ G ++ AR++FD+MP R+ VSW
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
++ GY Q EEA LF M + ++ ++ L G +++ + + + +
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNV----VSWTVMLGGLIEDGRVDEARQLFDMMPVK 116
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG-------------L 319
D ST ++D G + A EIF+ ++N+ W +M+ G
Sbjct: 117 ----DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIY 172
Query: 320 AMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
G +L FS M ++P +++ L C +D R++ ++
Sbjct: 173 ERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQL 223
>gi|449442521|ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 1 [Cucumis sativus]
gi|449442523|ref|XP_004139031.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 2 [Cucumis sativus]
Length = 517
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 259/492 (52%), Gaps = 52/492 (10%)
Query: 2 TLNNFIKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
T +K C + Q +IHAH + G LS I ++L+ +SSAS
Sbjct: 65 TFTYALKACCFLHQTQKGLEIHAHLIKSG--HLSDIFIQNSLLHFYILDGDVSSASL--- 119
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
IF++IP P S+ +II + A+ S+ ++++ P+ + L
Sbjct: 120 --------IFDSIPDPDVVSWTSIISGLSKLGFEKEAL---SKFLSMNVRPNSTTLVTAL 168
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
ACS L L + IH R+R E +V+
Sbjct: 169 SACSSLRCLKLGKAIHGL------------------------RMRTLNE-------ENVI 197
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL- 237
N L+D YV+ L A LF++MP RD VSW T++ GYAQS CEEA+++F NM+ +
Sbjct: 198 LENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNMVHVG 257
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYINT 296
+ P+ LV+ LSAC+ + L G+ +H YI + + +D + L++ Y KCG +
Sbjct: 258 EAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEM 317
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
AI IF++ + K++ +W+ ++ GLAM+GLG+ + V FS M+ + PD +T LG L CSH
Sbjct: 318 AILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHGVSPDDITFLGLLSACSH 377
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
GL+++ +F+ M+ VY +S +++HY CM D+ G+AGL++EA IK+MPM + VW
Sbjct: 378 GGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWG 437
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C++HGN + E E ++ K G + +L++ YA DRW D +R ++ +
Sbjct: 438 ALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACCDRWNDANDVRVAMRSRG 497
Query: 477 IKKNAGCSLIQL 488
+KK AG S I++
Sbjct: 498 LKKMAGRSWIEM 509
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 167/358 (46%), Gaps = 42/358 (11%)
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P P F+ +++F P N + L++QM + ++F + L+AC L
Sbjct: 26 PKPHIFNPLLGSLVNSIF--PENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQKGL 83
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
IH+ ++K G + D+F+ NSL+H Y + + A +FD I DVVS ++I G K G
Sbjct: 84 EIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIISGLSKLG 143
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
F++ EA+ F +M +++P++ LV+ALS
Sbjct: 144 --------FEK-----------------------EALSKFLSM---NVRPNSTTLVTALS 169
Query: 252 ACARLGELEQGKNIH--RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
AC+ L L+ GK IH R LN+ V L L+DFY +C Y+ +A +FE ++++
Sbjct: 170 ACSSLRCLKLGKAIHGLRMRTLNEENV--ILENALLDFYVRCAYLRSAENLFEKMPKRDV 227
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+W M+ G A GL ++ F M+ P+ T++ L CS + + +
Sbjct: 228 VSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHS 287
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ S + V + + ++ + G +E A+ + K + D+ WS ++ G ++G
Sbjct: 288 YINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKAIEH-KDIVSWSTIISGLAMNG 344
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 230/428 (53%), Gaps = 33/428 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ + S+N+II A+ + P A+ F M+ I PD + L
Sbjct: 273 LQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI 332
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
SQL ++++I LGF+ + E L +DVV
Sbjct: 333 FSQLSDQRISRSI------LGFV------------------------IRREWLDKDVVIG 362
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD--LD 238
N L++ Y K G + A +FD++P +D +SW TLV GY Q+ EAI + NMM+ D
Sbjct: 363 NALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRD 421
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
P+ VS + A + +G L+QG IH + N + +D F++T L+D Y KCG + A+
Sbjct: 422 TIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAM 481
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F WNA++ L +HG G +L F M+ R+K D +T + L CSH+G
Sbjct: 482 SLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSG 541
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LVDE +K FD M+ YG+ LKHYGCM DLLGRAG +E+A E+++ MP+ D +W L
Sbjct: 542 LVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGAL 601
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+I+GN E+ A++ ++++ E+ G Y +L+++YAN ++WE V+K+R ++
Sbjct: 602 LSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLR 661
Query: 479 KNAGCSLI 486
K G S +
Sbjct: 662 KTPGWSSV 669
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 39/375 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F ++P S+N +I + A+ + ++M+ + D + +L
Sbjct: 172 LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPV 231
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+Q IH VLK G DVFV N+L+++Y F RL+DAQ +FD++ RD+VS
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSW 291
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N++I A Y Q++ A++ F M I+
Sbjct: 292 NSII-------------------------------AAYEQNNDPSTALRFFKGMQLGGIR 320
Query: 241 PDNIALVSALSACARLGELEQGKNIHRY-IELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + +VS S ++L + ++I + I + D + LV+ YAK GY+N A
Sbjct: 321 PDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHT 380
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAG 358
+F+ K+ +WN ++ G +GL ++ ++ M E R P+ T + + SH G
Sbjct: 381 VFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVG 440
Query: 359 LVDEARKLFDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+ + K+ ++ S+Y ++ C+ DL G+ G +E+A+ + ++P V W+
Sbjct: 441 ALQQGMKIHAKLIKNSLY---LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV-PWN 496
Query: 417 GLLGGCRIHGNVEIA 431
++ IHG E A
Sbjct: 497 AIIASLGIHGRGEEA 511
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 186/428 (43%), Gaps = 52/428 (12%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N C + ++HA L G S +L+T L + T +S
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGK---SQNIVLSTKLINLYV----------THGDIS 71
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFS---SPLNAV-VLFSQMRTVSIPPDFYSFPFLL 118
+ S F+ I + FS+N+II A+ F +N V LFS + PDFY+FP +L
Sbjct: 72 LSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPIL 131
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+AC L + +H V K+GF DVFV SL+H+Y + L A ++F ++ +DV
Sbjct: 132 KACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N +I G+ + G+ A A + +RM
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGE-------------------------------G 217
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+K D I + S L CA+ ++ G IH ++ + + D F+S L++ Y+K G + A
Sbjct: 218 VKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQ 277
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ + ++L +WN+++ + +L +F M I+PD +T++ S
Sbjct: 278 MVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLS 337
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+R + + + K++ + ++ + G + A + ++P D W+ L
Sbjct: 338 DQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPR-KDTISWNTL 396
Query: 419 LGGCRIHG 426
+ G +G
Sbjct: 397 VTGYTQNG 404
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 239/427 (55%), Gaps = 1/427 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN++ ++ S+ +I + +V LF+QMR + D ++ L+ C
Sbjct: 314 AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 373
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +HS LK G + V NSL+ +Y L++A+ +F + RD+VS ++
Sbjct: 374 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 433
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPD 242
I Y + G++ AR+ FD M R+A++W ++ Y Q E+ ++++ M+ D+ PD
Sbjct: 434 ITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 493
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ V+ CA +G + G I + + ++ ++ + Y+KCG I+ A ++F+
Sbjct: 494 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 553
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K++ +WNAM+ G + HG+G+ + F M+ KPD ++ + L GCSH+GLV E
Sbjct: 554 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 613
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ FD M V+G+S L+H+ CM DLLGRAG + EA ++I KMPM VW LL C
Sbjct: 614 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 673
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+IHGN E+AE AA+HV +L D G Y +LA +Y++A + +D ++R+ + IKKN G
Sbjct: 674 KIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 733
Query: 483 CSLIQLN 489
S +++
Sbjct: 734 YSWMEVE 740
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 154/342 (45%), Gaps = 18/342 (5%)
Query: 19 IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFS 78
+H +T GL S + T+L+A + +S A + +I P+ +
Sbjct: 42 LHGRLVTVGLA--SAVFLQNTLLHAYLSCGALSDARRL----------LRADIKEPNVIT 89
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQM--RTV----SIPPDFYSFPFLLRACSQLCSHSLAQT 132
+N ++ + S +A LF +M R V ++ D +C L LA
Sbjct: 90 HNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQ 149
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGD 192
+ K F D V +L+ ++ + A LF +I + N+++ GY K
Sbjct: 150 LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYG 209
Query: 193 LAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
+ HA + F+ M RD VSW ++A +QS + EA+ L M ++ D+ S+L+A
Sbjct: 210 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 269
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
CARL L GK +H + + ++D ++++ L++ YAKCG A +F S Q++N +W
Sbjct: 270 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 329
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
++ G + S+ F++M + D + + GC
Sbjct: 330 TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 15/249 (6%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD-EILYRD 176
LR+C + + A+ +H +++ +G VF+ N+L+H Y L DA+ L +I +
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSD---------QCEE- 226
V++ N +++GY K G L+ A +LFDRMP RD SW TL++ ++ C E
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 227 AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVD 286
A QL D D + + R G ++ + IE I F ++
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI----FCRNSMLA 202
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAK I+ AIE FE E+++ +WN M+ L+ G R +L M ++ D T
Sbjct: 203 GYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTT 262
Query: 347 ILGALVGCS 355
+L C+
Sbjct: 263 YTSSLTACA 271
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 230/428 (53%), Gaps = 33/428 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ + S+N+II A+ + P A+ F M+ I PD + L
Sbjct: 273 LQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI 332
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
SQL ++++I LGF+ + E L +DVV
Sbjct: 333 FSQLSDQRISRSI------LGFV------------------------IRREWLDKDVVIG 362
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD--LD 238
N L++ Y K G + A +FD++P +D +SW TLV GY Q+ EAI + NMM+ D
Sbjct: 363 NALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRD 421
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
P+ VS + A + +G L+QG IH + N + +D F++T L+D Y KCG + A+
Sbjct: 422 TIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAM 481
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F WNA++ L +HG G +L F M+ R+K D +T + L CSH+G
Sbjct: 482 SLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSG 541
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LVDE +K FD M+ YG+ LKHYGCM DLLGRAG +E+A E+++ MP+ D +W L
Sbjct: 542 LVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGAL 601
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+I+GN E+ A++ ++++ E+ G Y +L+++YAN ++WE V+K+R ++
Sbjct: 602 LSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLR 661
Query: 479 KNAGCSLI 486
K G S +
Sbjct: 662 KTPGWSSV 669
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 39/375 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F ++P S+N +I + A+ + ++M+ + D + +L
Sbjct: 172 LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPV 231
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+Q IH VLK G DVFV N+L+++Y F RL+DAQ +FD++ RD+VS
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSW 291
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N++I A Y Q++ A++ F M I+
Sbjct: 292 NSII-------------------------------AAYEQNNDPSTALRFFKGMQLGGIR 320
Query: 241 PDNIALVSALSACARLGELEQGKNIHRY-IELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + +VS S ++L + ++I + I + D + LV+ YAK GY+N A
Sbjct: 321 PDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHT 380
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAG 358
+F+ K+ +WN ++ G +GL ++ ++ M E R P+ T + + SH G
Sbjct: 381 VFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVG 440
Query: 359 LVDEARKLFDEM--ESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+ + K+ ++ S+Y ++ C+ DL G+ G +E+A+ + ++P V W+
Sbjct: 441 ALQQGMKIHAKLIKNSLY---LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV-PWN 496
Query: 417 GLLGGCRIHGNVEIA 431
++ IHG E A
Sbjct: 497 AIIASLGIHGRGEEA 511
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 186/428 (43%), Gaps = 52/428 (12%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
N C + ++HA L G S +L+T L + T +S
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGK---SQNIVLSTKLINLYV----------THGDIS 71
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFS---SPLNAV-VLFSQMRTVSIPPDFYSFPFLL 118
+ S F+ I + FS+N+II A+ F +N V LFS + PDFY+FP +L
Sbjct: 72 LSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPIL 131
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+AC L + +H V K+GF DVFV SL+H+Y + L A ++F ++ +DV
Sbjct: 132 KACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N +I G+ + G+ A A + +RM
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGE-------------------------------G 217
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+K D I + S L CA+ ++ G IH ++ + + D F+S L++ Y+K G + A
Sbjct: 218 VKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQ 277
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ + ++L +WN+++ + +L +F M I+PD +T++ S
Sbjct: 278 MVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLS 337
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+R + + + K++ + ++ + G + A + ++P D W+ L
Sbjct: 338 DQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPR-KDTISWNTL 396
Query: 419 LGGCRIHG 426
+ G +G
Sbjct: 397 VTGYTQNG 404
>gi|115448475|ref|NP_001048017.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|46390470|dbj|BAD15931.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|46390866|dbj|BAD16370.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537548|dbj|BAF09931.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|125541007|gb|EAY87402.1| hypothetical protein OsI_08809 [Oryza sativa Indica Group]
gi|125583571|gb|EAZ24502.1| hypothetical protein OsJ_08263 [Oryza sativa Japonica Group]
Length = 488
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 219/379 (57%), Gaps = 7/379 (1%)
Query: 118 LRACSQLCSHSLAQT--IHSQVLKLG---FICDVFVLNSLMHVYCVFHRLRDAQELFDEI 172
L AC++L + A+ IH+ ++K G + V+ SL+ VY RL DA+++FD +
Sbjct: 67 LAACARLLPSAAAEAEQIHALLVKSGDPPSVSGVYASTSLVRVYARLGRLGDARKMFDGM 126
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
+ VVS N L+DG V+A DL A ++F MP R+ VSW T++AG+ + +EA+ LF
Sbjct: 127 PVKTVVSWNVLLDGIVRASDLDAAWEVFVEMPERNVVSWNTVIAGFVRHGWVQEAVDLFA 186
Query: 233 NMMDL-DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M + + PD +V +SA +G L G+ H Y+ + +D L L++ Y +C
Sbjct: 187 EMTVVYGLAPDEATMVGFVSAVRDMGVLGIGRCAHGYVIRREFSLDGALGVALINMYTRC 246
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGAL 351
G + A F S KN+ W +++ G A HG ++L F+ M + I+P+GVT L L
Sbjct: 247 GSMGDAFRCFSSVASKNVEQWTSVIGGFAAHGHPEMALRLFTEMRQLGIEPNGVTFLAVL 306
Query: 352 VGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
CSH GLV+E K F+ M S+ G+ ++HYGC+ DLLGRAG +EEA E+ +P
Sbjct: 307 NACSHGGLVNEGFKYFNLMRSM-GIKSTMQHYGCLIDLLGRAGFLEEAFELASSLPEDPG 365
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRS 471
+ +WS LL C+ HGNVE+AE AA + +P G Y +L++ YA A +WED+ + RR
Sbjct: 366 LVIWSSLLAACQSHGNVEMAEVAARKLAHAEPRHGSSYVLLSNTYARAGQWEDLKRTRRK 425
Query: 472 LDAGKIKKNAGCSLIQLNG 490
++ + K G S I+L+G
Sbjct: 426 MEEYGVMKQPGLSWIELDG 444
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 132/321 (41%), Gaps = 35/321 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV-SIPPDFYSFPFLLR 119
L A +F +P + S+NT+I AV LF++M V + PD + +
Sbjct: 147 LDAAWEVFVEMPERNVVSWNTVIAGFVRHGWVQEAVDLFAEMTVVYGLAPDEATMVGFVS 206
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
A + + + H V++ F L+ + V
Sbjct: 207 AVRDMGVLGIGRCAHGYVIR-----REFSLDGALGV------------------------ 237
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
LI+ Y + G + A + F + ++ W +++ G+A E A++LF M L I
Sbjct: 238 --ALINMYTRCGSMGDAFRCFSSVASKNVEQWTSVIGGFAAHGHPEMALRLFTEMRQLGI 295
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+P+ + ++ L+AC+ G + +G + I+ L+D + G++ A E
Sbjct: 296 EPNGVTFLAVLNACSHGGLVNEGFKYFNLMRSMGIKSTMQHYGCLIDLLGRAGFLEEAFE 355
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+ S ++ L W+++L HG ++ V ++ A + +L + + AG
Sbjct: 356 LASSLPEDPGLVIWSSLLAACQSHGNVEMAEVAARKLAHAEPRHGSSYVLLSNT-YARAG 414
Query: 359 LVDEARKLFDEMESVYGVSKE 379
++ ++ +ME YGV K+
Sbjct: 415 QWEDLKRTRRKMEE-YGVMKQ 434
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 243 NIALVSALSACARL--GELEQGKNIHRYI--ELNQIRVDS-FLSTGLVDFYAKCGYINTA 297
N ALV AL+ACARL + + IH + + V + ST LV YA+ G + A
Sbjct: 60 NPALVPALAACARLLPSAAAEAEQIHALLVKSGDPPSVSGVYASTSLVRVYARLGRLGDA 119
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++F+ K + +WN +L G+ + F M E + V+ + G
Sbjct: 120 RKMFDGMPVKTVVSWNVLLDGIVRASDLDAAWEVFVEMPERNV----VSWNTVIAGFVRH 175
Query: 358 GLVDEARKLFDEMESVYGVSKE 379
G V EA LF EM VYG++ +
Sbjct: 176 GWVQEAVDLFAEMTVVYGLAPD 197
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 250/458 (54%), Gaps = 15/458 (3%)
Query: 46 TFKPISSASSPTTDPLSYALSIFNNIPYPS--TFSYNTIIRAHTLFSSPLNAVVLFSQMR 103
++ + +A + L AL + + +P S SYNT+I + A+ +F+Q+
Sbjct: 97 SYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLA 156
Query: 104 ------TVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC 157
+ D ++ AC+ L + +H V+ G V + N+++ Y
Sbjct: 157 RDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYS 216
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
R+ DA+ +FD++ RD VS ++I GY +A L A Q+FD MP +DA++W L++G
Sbjct: 217 KAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISG 276
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
+ Q+ + E A++LF M + P ALVS L ACA++G + +GK +H +I I D
Sbjct: 277 HEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSD 336
Query: 278 S---FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
F+ L+D Y+KCG + A+ +F+ E+++ +WN+M+ G + +G G+ SL F R
Sbjct: 337 PFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFER 396
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M++ ++P VT L L CSHAGLV + R++ + M+ +GV +HY D LGR
Sbjct: 397 MLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNR 455
Query: 395 LIEEALEMIKKMPMG---GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
+EEA E IK + G W LLG C +HGN+EIAE AE + +L+PE+ G Y +
Sbjct: 456 QLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVM 515
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
L+++Y+ A +W+D ++R + ++K+ S I++
Sbjct: 516 LSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQ 553
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 157/369 (42%), Gaps = 43/369 (11%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
L RA S L +H+ ++K + N L+ +Y + + FD++
Sbjct: 32 LALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLP 91
Query: 174 YRDVVSCNTLIDGYVKA-GDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAIQL 230
+++ S N+L+ + G L A +L D MP R+ VS+ T+++ A+ + EA+++
Sbjct: 92 HKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRV 151
Query: 231 FCNMM------DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
F + + D +VSA SACA L + + +H + ++ + V ++ +
Sbjct: 152 FAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAM 211
Query: 285 VDFYAKCGYI-------------------------------NTAIEIFESSQEKNLFTWN 313
VD Y+K G + + A+++F+ ++ W
Sbjct: 212 VDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWT 271
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL--FDEME 371
A++ G +G ++L F RM + P ++ L C+ GLV +++ F
Sbjct: 272 ALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRR 331
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S+ + + + D+ + G + A+ + +M + D+ W+ ++ G +G + +
Sbjct: 332 SIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM-LERDIISWNSMVTGFSHNGQGKQS 390
Query: 432 EAAAEHVMK 440
A E ++K
Sbjct: 391 LAVFERMLK 399
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 259/514 (50%), Gaps = 50/514 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
I+ + +H+ + + L S + ++ A + K ++SA +F+ IP
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGV--KLMRAYASLKDVASARK-----------VFDEIP 101
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+ N +IR++ V +F M ++ PD Y+FP +L+ACS + + +
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK--- 189
IH K+G +FV N L+ +Y L +A+ + DE+ RDVVS N+L+ GY +
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 190 -------------------AGDLA---------------HARQLFDRMPFRDAVSWGTLV 215
AG +A + + +F +M + VSW ++
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMI 281
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
Y ++ EA++L+ M +PD +++ S L AC L GK IH YIE ++
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L L+D YAKCG + A ++FE+ + +++ +W AM+ G G ++ FS++
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
++ + PD + + L CSHAGL++E R F M Y ++ L+H CM DLLGRAG
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
++EA I+ M M + VW LLG CR+H + +I AA+ + +L PE G Y +L+++
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
YA A RWE+V IR + + +KKN G S +++N
Sbjct: 522 YAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 250/457 (54%), Gaps = 40/457 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F + + S+NT++ A+T +A LF++M D S+ LL C
Sbjct: 123 AEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPV----RDAGSWNILL--CGL 176
Query: 124 LCSHSLAQ-----------------TIHSQVLKLGFICDVFVL------------NSLMH 154
+ S SL + T+ S + + G + D +VL N+++
Sbjct: 177 VRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMIS 236
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
Y HR+ +A +LF ++ RDV S N +I G+++ DL ARQLFD MP R+ ++W T+
Sbjct: 237 GYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTM 296
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI 274
+ GY Q Q E A++LF M+ I+P+ + + +L AC+ L L +G+ +H+ I
Sbjct: 297 MNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPS 356
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
+ D+F+ + L++ YAKCG I A +F+ S EK+L +WN ++ A HG G ++ +
Sbjct: 357 QFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKN 416
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M E KP+ T +G L CSHAGLVDE K+F+ M + +HY C+ DL RAG
Sbjct: 417 MQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAG 476
Query: 395 LIEEALEMI---KKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
+E+A +I K P VWS LLGGC HGN I + AA+H+++ +P++ G Y +
Sbjct: 477 RLEDAKRLISWFKIKPTSST--VWSALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTL 534
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
L ++YA+A +W++ +IR ++ +KK GCS I++
Sbjct: 535 LCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEV 571
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 150/332 (45%), Gaps = 43/332 (12%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
+V +L+ Y R+ +A+ LF+ + R+VVS NT+++ Y G + A LF+RMP
Sbjct: 103 NVVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMP 162
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RDA SW L+ G +S E A ++F M D+ ++ + +S AR G ++
Sbjct: 163 VRDAGSWNILLCGLVRSGSLERARKMFERMPVRDV----MSWTTMISGLARNGSVDDAWV 218
Query: 265 IHRYI-ELNQIRVDSFLS--------TGLVDFYAK-------------CGYIN-----TA 297
+ + E N + ++ +S +D + K G+I +A
Sbjct: 219 LFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSA 278
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++F+ ++N+ TW M+ G ++L F+ M+ I+P+ VT LG+L CS+
Sbjct: 279 RQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNL 338
Query: 358 GLVDEARKLFDEMESVYGVSKELKHY--GCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+ E +++ + + + + + +L + G I A + M D+ W
Sbjct: 339 AALCEGQQVH---QMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVF-DFSMEKDLISW 394
Query: 416 SGLLGGCRIHG-NVEIAEAAAEHVMKLKPEDG 446
+G++ HG +E A H+ K E+G
Sbjct: 395 NGIIAAYAHHGFGIE-----AMHLYKNMQENG 421
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 126/262 (48%), Gaps = 19/262 (7%)
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRM-PFRDAVSWGTLVAGYA 219
R+ DA+ LFD + RDVVS ++ Y + G L AR LFDR R+ V+W L++GYA
Sbjct: 56 RVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYA 115
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
++ + +EA LF M + ++ ++ + L A +G +E + + + +
Sbjct: 116 RARRVDEAEALFEGMAERNV----VSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNI 171
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
L GLV + G + A ++FE +++ +W M+ GLA +G + V F M E
Sbjct: 172 LLCGLV----RSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERN 227
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ V+ + G + ++EA LF +M +++ + M + ++ A
Sbjct: 228 V----VSWNAMISGYARNHRIEEALDLFTKMP-----IRDVASWNIMITGFIQNKDLKSA 278
Query: 400 LEMIKKMPMGGDVFVWSGLLGG 421
++ +MP +V W+ ++ G
Sbjct: 279 RQLFDEMP-KRNVITWTTMMNG 299
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 140/323 (43%), Gaps = 38/323 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P + ++ T++ + A+ LF+ M I P+ +F L A
Sbjct: 275 LKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDA 334
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L + Q +H + K D FV ++LM++Y +R A+ +FD + +D++S
Sbjct: 335 CSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLIS- 393
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
W ++A YA EA+ L+ NM + K
Sbjct: 394 ------------------------------WNGIIAAYAHHGFGIEAMHLYKNMQENGYK 423
Query: 241 PDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P++ V LSAC+ G +++G I ++ N I V T LVD ++ G + A
Sbjct: 424 PNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKR 483
Query: 300 IFESSQEKNLFT--WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC-SH 356
+ + K + W+A+L G HG + + ++EA +PD L +
Sbjct: 484 LISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEA--EPDNAGTYTLLCNIYAS 541
Query: 357 AGLVDEARKLFDEMESVYGVSKE 379
AG EA ++ EM +V G+ K+
Sbjct: 542 AGKWKEAAEIRSEM-NVRGLKKQ 563
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRM 203
DV +++ Y L++A+ LFD R+VV+ L+ GY +A + A LF+ M
Sbjct: 71 DVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYARARRVDEAEALFEGM 130
Query: 204 PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGK 263
R+ VSW T++ Y + E+A LF M D NI L + R G LE+ +
Sbjct: 131 AERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLV----RSGSLERAR 186
Query: 264 NIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG 323
+ + + + + + +GL A+ G ++ A +F++ E+N+ +WNAM+ G A +
Sbjct: 187 KMFERMPVRDVMSWTTMISGL----ARNGSVDDAWVLFDAMPERNVVSWNAMISGYARNH 242
Query: 324 LGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+L F++M + + I G + + AR+LFDEM
Sbjct: 243 RIEEALDLFTKMPIRDVASWNIMITGFIQNKD----LKSARQLFDEM 285
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
V N + AG ++ AR+LFD MP RD VSW +VA YA+ +EA LF
Sbjct: 41 VQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR--- 97
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVDFYAKCGYIN 295
D + + + + LS AR +++ + + + E N + ++ L Y G +
Sbjct: 98 PDARRNVVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEA-----YTAVGRVE 152
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A +F ++ +WN +L GL G SL +M E D ++ + G +
Sbjct: 153 DASALFNRMPVRDAGSWNILLCGLVRSG----SLERARKMFERMPVRDVMSWTTMISGLA 208
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
G VD+A LFD M VS + M R IEEAL++ KMP+ DV W
Sbjct: 209 RNGSVDDAWVLFDAMPERNVVS-----WNAMISGYARNHRIEEALDLFTKMPI-RDVASW 262
Query: 416 SGLLGG 421
+ ++ G
Sbjct: 263 NIMITG 268
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG---- 344
A G ++ A +F+ ++++ +W AM+ A G+ + + V F R PD
Sbjct: 52 AAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR-------PDARRNV 104
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
VT L G + A VDEA LF+ M + + + M + G +E+A +
Sbjct: 105 VTWTALLSGYARARRVDEAEALFEGM-----AERNVVSWNTMLEAYTAVGRVEDASALFN 159
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
+MP+ D W+ LL G G++E A E +
Sbjct: 160 RMPV-RDAGSWNILLCGLVRSGSLERARKMFERM 192
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 234/426 (54%), Gaps = 4/426 (0%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
N +T S+ + I + A FS MR + P+ +F LL C + S
Sbjct: 22 LNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSG 81
Query: 128 S--LAQTIHSQVLKLGF-ICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S L +H KLG V V +++ +Y R A+ +FD + ++ V+ NT+I
Sbjct: 82 SEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMI 141
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
DGY+++G + +A +LFD MP RD +SW ++ G+ + EEA+ F M +KPD +
Sbjct: 142 DGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYV 201
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
A+++AL+AC LG L G +HRY+ + + +S L+D Y +CG + A E+F+
Sbjct: 202 AIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKM 261
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++ + +WN+++VG A +G SLVYF +M E KPD VT GAL CSH GLV+E
Sbjct: 262 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGL 321
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ F M+ + +S ++HYGC+ DL RAG +E+AL +++ MPM + V LL CR
Sbjct: 322 RYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRN 381
Query: 425 HGNVEI-AEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
HGN + AE +H+ L + Y +L+++YA WE K+RR + +KK G
Sbjct: 382 HGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGIWEGASKMRRKMKGLGLKKQPGF 441
Query: 484 SLIQLN 489
S ++++
Sbjct: 442 SSVEID 447
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 37/264 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ +F+ +P S+ +I A+ F +M+ + PD+ + L AC+
Sbjct: 153 AVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTH 212
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + S +H V+ F ++ V NSL+ +YC + A+E+FD++ R VVS N++
Sbjct: 213 LGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSV 272
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G+ AH E++ F M + KPD
Sbjct: 273 IVGFAANGN-AH------------------------------ESLVYFRKMQEEGFKPDA 301
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQI---RVDSFLSTGLVDFYAKCGYINTAIEI 300
+ AL+AC+ +G +E+G + ++ + R++ + LVD Y++ G + A+ +
Sbjct: 302 VTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHY--GCLVDLYSRAGRLEDALNV 359
Query: 301 FESSQEK-NLFTWNAMLVGLAMHG 323
+S K N ++L HG
Sbjct: 360 VQSMPMKPNEVVIGSLLAACRNHG 383
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 267/523 (51%), Gaps = 54/523 (10%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L +R + Q+HA L +GL P T+ I+S+SSP
Sbjct: 11 LTGLAQRALSPAAARQLHAQLLLRGLPL--PARAAVTL---------IASSSSP-----Q 54
Query: 63 YALSIFNNIPYPST--FSYNTIIRAHTLFSSPL---NAVVLFSQMRTVSIPPDFYSFPFL 117
YA +IF+++P S + + + ++ +SP A LF M P+ ++ +
Sbjct: 55 YARAIFDSVPAASANVYLWTATVSSYAKHASPALAAEAFPLFMFMLRSGPRPNGFTVSSV 114
Query: 118 LRACSQL-CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
L++ S+L +H + Q +H ++K G + V +L+ Y R++DA+ +FDE+ +
Sbjct: 115 LKSLSKLRAAHQVCQ-VHGFLVKAGLASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSN 173
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQS--------------- 221
VV N ++ GYVKAGD+ ARQ+FD M RD++SW TL++GY +
Sbjct: 174 VVVGNAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQ 233
Query: 222 ----------DQCEE------AIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
C E ++ +F M + +PD + +SACA+LG L + +
Sbjct: 234 RNVNSWNMMISACSEVGLWADSVAVFNQMRFMSFRPDAATMAVLMSACAQLGFLSVARQV 293
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
+ + + ++ + LVD +AKCG + A +F K++ ++N M+ LA HG G
Sbjct: 294 YGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHG 353
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC 385
+ +L F +MIE ++PD VT LG L C+HAGLVD + F+ M + Y + K HY C
Sbjct: 354 KDALKLFEQMIEGGLQPDAVTFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKSADHYAC 413
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPED 445
M DL GR GLIEEA +K MP+ +W LL CR H N+++ E AA +++++P +
Sbjct: 414 MVDLYGRVGLIEEAHYFVKIMPVKPHAGIWGALLNACRKHCNIDVGEVAARELIRIEPMN 473
Query: 446 GGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
G Y +L++ A + +W+ V +R+ + I KN G S +++
Sbjct: 474 PGNYVLLSNTLAWSQQWDAVGDVRQLMRGNGIDKNTGFSWVEV 516
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 203/344 (59%)
Query: 146 VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPF 205
VF +++H + + + AQ+LFD + + +VS ++ Y K G+L AR LFD M
Sbjct: 93 VFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEE 152
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
RD V W ++ GY Q+ EA+ LF M+ KP+ + ++S LSAC +LG LE G+ +
Sbjct: 153 RDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWV 212
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
H YIE N I+ + + T LVD Y+KCG + A +F+ +K++ WN+M+VG AMHG
Sbjct: 213 HSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFS 272
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC 385
+ +L F M + P +T +G L C H+G V E +F++M+ YG+ +++HYGC
Sbjct: 273 QEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGC 332
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPED 445
M +LLGRAG +E+A E++K M + D +W LLG CR+HG + + E E ++ +
Sbjct: 333 MVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLAN 392
Query: 446 GGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
G Y +L+++YA W+ V ++R + +KK GCS I++N
Sbjct: 393 SGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVN 436
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 156/382 (40%), Gaps = 58/382 (15%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I + KTI + QIHA GL + I FK S +S L Y++
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDH-----------HPILNFKLQRSYAS--LGRLDYSV 82
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
++F PS F + II H L ++A LF M S+ S +L ++
Sbjct: 83 ALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSL----VSLTAMLTCYAKHG 138
Query: 126 SHSLAQTIHSQVLKLGFIC-----DVFVLNSLMH-VYCVFHRLRDAQELFDEILYRDVVS 179
A+ + + + +C D + N + + +F R+ A+ +E+ V+S
Sbjct: 139 ELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLS 198
Query: 180 C-----------------------------NTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
L+D Y K G L AR +FD++ +D V+
Sbjct: 199 ACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVA 258
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W +++ GYA +EA+QLF +M + + P NI + LSAC G + +G +I ++
Sbjct: 259 WNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMK 318
Query: 271 LN---QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAMHGLGR 326
+ +++ + +V+ + G++ A E+ ++ E + W +L +HG
Sbjct: 319 DEYGIEPKIEHY--GCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIA 376
Query: 327 LSLVYFSRMIEARIKPDGVTIL 348
L +++ + G IL
Sbjct: 377 LGEKIVELLVDQNLANSGTYIL 398
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 249/458 (54%), Gaps = 24/458 (5%)
Query: 40 ILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLF 99
+L+A+++F PI SP + I N P S ++R F+SP +
Sbjct: 34 MLFALSSF-PI--PQSPNRN------QIHNVKPQSSETLKIDLLRN---FNSPFELRQVH 81
Query: 100 SQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVF 159
+Q+ + P + C+ S AQ I V K + FV NS +
Sbjct: 82 AQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQK--PETFVWNSCLKALAEG 139
Query: 160 HRLRDAQELFDEILYRDVV----SCNTLIDGYVKAGDLAHARQL---FDRMPFRDAVSWG 212
DA LF + DV +C++++ + DL++ R L +++ FR SW
Sbjct: 140 DSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR---SWT 196
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+++AGY Q + +EAI LF M + +K + + +V+ L+ACA LG L+ G IH Y +
Sbjct: 197 SMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRH 256
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
+ + +S L+D Y KCG + A ++FE +E+ + +W+AM+ GLAMHG +L F
Sbjct: 257 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLF 316
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
S M + I+P+GVT +G L CSH GL+ E R+ F M YG+ +++HYGCM DLL R
Sbjct: 317 SDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSR 376
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVL 452
AGL+ EA E I MPM + VW LLG CR+H NVE+AE A +H+++L P + G Y VL
Sbjct: 377 AGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVL 436
Query: 453 ADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++YA A RWED ++R+ + ++KK G S I ++G
Sbjct: 437 SNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDG 474
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 239/427 (55%), Gaps = 1/427 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN++ ++ S+ +I + +V LF+QMR + D ++ L+ C
Sbjct: 324 AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 383
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +HS LK G + V NSL+ +Y L++A+ +F + RD+VS ++
Sbjct: 384 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 443
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPD 242
I Y + G++ AR+ FD M R+A++W ++ Y Q E+ ++++ M+ D+ PD
Sbjct: 444 ITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 503
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ V+ CA +G + G I + + ++ ++ + Y+KCG I+ A ++F+
Sbjct: 504 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 563
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K++ +WNAM+ G + HG+G+ + F M+ KPD ++ + L GCSH+GLV E
Sbjct: 564 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ FD M V+G+S L+H+ CM DLLGRAG + EA ++I KMPM VW LL C
Sbjct: 624 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 683
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+IHGN E+AE AA+HV +L D G Y +LA +Y++A + +D ++R+ + IKKN G
Sbjct: 684 KIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 743
Query: 483 CSLIQLN 489
S +++
Sbjct: 744 YSWMEVE 750
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 1/295 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
LS A +F+ +P S+NT++ + L+ + F M R+ P+ ++F +++
Sbjct: 87 LSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMK 146
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+C L LA + K F D V +L+ ++ + A LF +I +
Sbjct: 147 SCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFC 206
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N+++ GY K + HA + F+ M RD VSW ++A +QS + EA+ L M +
Sbjct: 207 RNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 266
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ D+ S+L+ACARL L GK +H + + ++D ++++ L++ YAKCG A
Sbjct: 267 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+F S Q++N +W ++ G + S+ F++M + D + + GC
Sbjct: 327 VFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 130/256 (50%), Gaps = 8/256 (3%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD-EILYRD 176
LR+C + + A+ +H +++ +G VF+ N+L+H Y L DA+ L +I +
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-M 235
V++ N +++GY K G L+ A +LFDRMP RD SW TL++GY Q+ + + ++ F +M
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
D P+ + +C LG E + D + T LVD + +CGY++
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLA-MHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A +F + +F N+ML G A ++G+ ++ YF M E D V+ +
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDH-AIEYFEDMAE----RDVVSWNMMIAAL 245
Query: 355 SHAGLVDEARKLFDEM 370
S +G V EA L EM
Sbjct: 246 SQSGRVREALGLVVEM 261
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 239/426 (56%), Gaps = 1/426 (0%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN++ ++ S+ +I + +V LF+QMR + D ++ L+ C
Sbjct: 324 AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 383
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +HS LK G + V NSL+ +Y L++A+ +F + RD+VS ++
Sbjct: 384 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 443
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPD 242
I Y + G++ AR+ FD M R+A++W ++ Y Q E+ ++++ M+ D+ PD
Sbjct: 444 ITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 503
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ V+ CA +G + G I + + ++ ++ + Y+KCG I+ A ++F+
Sbjct: 504 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 563
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K++ +WNAM+ G + HG+G+ + F M+ KPD ++ + L GCSH+GLV E
Sbjct: 564 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
+ FD M V+G+S L+H+ CM DLLGRAG + EA ++I KMPM VW LL C
Sbjct: 624 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 683
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
+IHGN E+AE AA+HV +L D G Y +LA +Y++A + +D ++R+ + IKKN G
Sbjct: 684 KIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 743
Query: 483 CSLIQL 488
S +++
Sbjct: 744 YSWMEV 749
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 1/295 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
LS A +F+ +P S+NT++ + L+ + F M R+ P+ ++F +++
Sbjct: 87 LSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMK 146
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+C L LA + K F D V +L+ ++ + A LF +I +
Sbjct: 147 SCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFC 206
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDI 239
N+++ GY K + HA + F+ M RD VSW ++A +QS + EA+ L M +
Sbjct: 207 RNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 266
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ D+ S+L+ACARL L GK +H + + ++D ++++ L++ YAKCG A
Sbjct: 267 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+F S Q++N +W ++ G + S+ F++M + D + + GC
Sbjct: 327 VFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 130/256 (50%), Gaps = 8/256 (3%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD-EILYRD 176
LR+C + + A+ +H +++ +G VF+ N+L+H Y L DA+ L +I +
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-M 235
V++ N +++GY K G L+ A +LFDRMP RD SW TL++GY Q+ + + ++ F +M
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
D P+ + +C LG E + D + T LVD + +CGY++
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLA-MHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A +F + +F N+ML G A ++G+ ++ YF M E D V+ +
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDH-AIEYFEDMAE----RDVVSWNMMIAAL 245
Query: 355 SHAGLVDEARKLFDEM 370
S +G V EA L EM
Sbjct: 246 SQSGRVREALGLVVEM 261
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 221/426 (51%), Gaps = 32/426 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL+ FN + ++N++I + P NA+ +F ++R +I PD + ++ AC+
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L IH ++KLGF D V N+L
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVKNAL------------------------------- 572
Query: 184 IDGYVKAGDLAHARQLFDRMPF-RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
ID Y K G L A LF++ F +D V+W ++A Y Q+ +EAI F M + P+
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPN 632
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++ VS L A A L +G H I ++ + L+D YAKCG + + ++F
Sbjct: 633 SVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFN 692
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
K+ +WNAML G A+HG G ++ FS M E++++ D V+ + L C H GLV+E
Sbjct: 693 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEE 752
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
RK+F M Y + +L+HY CM DLLGRAGL +E L IK MP+ D VW LLG C
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 812
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R+H NV++ E A +H++KL+P + + VL+ +YA + RW D K R ++ +KK G
Sbjct: 813 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872
Query: 483 CSLIQL 488
CS ++L
Sbjct: 873 CSWVEL 878
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 202/447 (45%), Gaps = 65/447 (14%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+ CK + + QIHA + G H +T ++ + F A
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGF---KHHHSITHLINLYSLFHKCD-----------LAR 83
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
S+F++ P PS +N++IRA+T A+ ++ M + PD Y+F F+L+AC+
Sbjct: 84 SVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGAL 143
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ H ++ + G L RDV L+D
Sbjct: 144 NLQEGVWFHGEIDRRG-------------------------------LERDVFIGAGLVD 172
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y K GDL AR++FD+MP RD V+W ++AG +QS+ EA+ F +M + ++P +++
Sbjct: 173 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVS 232
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVD--SFLSTGLVDFYAKCGYINTAIEIFES 303
L++ +L +E ++IH Y+ R D S +S GL+D Y+KCG ++ A +F+
Sbjct: 233 LLNLFPGICKLSNIELCRSIHGYV----FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQ 288
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+++ +W M+ G A +G L F +M ++ + V+ + A + + +++
Sbjct: 289 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Query: 364 RK-----LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
++ L ++S V+ L + + G E+A ++ + G D+ WS +
Sbjct: 349 KEIHGCALQQRIDSDILVATPL------MVMYAKCGETEKAKQLFWGL-QGRDLVAWSAI 401
Query: 419 LGGCRIHGNVEIAEAAAEHV--MKLKP 443
+ G E A + + + K+KP
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKP 428
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 161/366 (43%), Gaps = 45/366 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P ++N +I + P AV F M+ V + P S L
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+L + L ++IH V + F V
Sbjct: 240 ICKLSNIELCRSIHGYVFRRDFSSAV---------------------------------S 266
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LID Y K GD+ AR++FD+M +D VSWGT++AGYA + E ++LF M +++
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ ++ VSA A A +LE+GK IH +I D ++T L+ YAKCG A ++
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F Q ++L W+A++ L G +L F M ++KP+ VT++ L C+ L+
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 361 DEARKLF-----DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+ + +M+S +L + + + G AL +M D+ W
Sbjct: 447 KLGKSIHCFTVKADMDS------DLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTW 499
Query: 416 SGLLGG 421
+ L+ G
Sbjct: 500 NSLING 505
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 6/269 (2%)
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
D++ L+ Y K G+ A+QLF + RD V+W ++A Q+ EEA+ LF M
Sbjct: 363 DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGY 293
+ +KP+ + L+S L ACA L L+ GK+IH + + +DS LSTG LV YAKCG+
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTV--KADMDSDLSTGTALVSMYAKCGF 480
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
A+ F +++ TWN+++ G A G ++ F ++ + I PD T++G +
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C+ +D+ + + + G + + D+ + G + A + K D
Sbjct: 541 CALLNDLDQGTCIHGLIVKL-GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV 599
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLK 442
W+ ++ +G+ + A ++ H M+L+
Sbjct: 600 TWNVIIAAYMQNGHAKEA-ISSFHQMRLE 627
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 34/357 (9%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
+++ II A P A+ LF +M+ + P+ + +L AC+ L L ++IH
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
+K D+ +L+ +Y A F+ + RD+V+ N+LI+GY + GD
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGD----- 511
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
P+ AI +F + I PD +V + ACA L
Sbjct: 512 ------PY--------------------NAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAML 316
+L+QG IH I D + L+D YAKCG + +A +F + K+ TWN ++
Sbjct: 546 DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII 605
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
+G + ++ F +M P+ VT + L ++ E + + +
Sbjct: 606 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
S L + D+ + G + + ++ +M D W+ +L G +HG+ + A A
Sbjct: 666 SNTLVG-NSLIDMYAKCGQLXYSEKLFNEMDH-KDTVSWNAMLSGYAVHGHGDRAIA 720
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 135/321 (42%), Gaps = 49/321 (15%)
Query: 22 HFLTKGLLFLSPCHILTTI--LYAITTFKPISSASSPTTDPLSYALSIFNNIPY-PSTFS 78
H L L F S CH+ + +YA S P+ + L FN + +
Sbjct: 554 HGLIVKLGFESDCHVKNALIDMYA-------KCGSLPSAEFL------FNKTDFTKDEVT 600
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N II A+ A+ F QMR + P+ +F +L A + L + H+ ++
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
++GF+ + V NSL+ +Y +L +++LF+E+ ++D VS N ++ GY G
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHG------- 713
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+ AI LF M + ++ D+++ VS LSAC G
Sbjct: 714 ------------------------HGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGL 749
Query: 259 LEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAML 316
+E+G+ I H + I+ D +VD + G + + + E + W A+L
Sbjct: 750 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809
Query: 317 VGLAMHGLGRLSLVYFSRMIE 337
MH +L V +++
Sbjct: 810 GSCRMHSNVKLGEVALDHLVK 830
>gi|242063604|ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
gi|241932922|gb|EES06067.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
Length = 514
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 260/455 (57%), Gaps = 28/455 (6%)
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV--SIPPDFYSFPFLLR 119
++ LS F+++ F N ++R+ + + PL A+ LF ++R + P+ Y+F FLL+
Sbjct: 26 AHLLSSFSHL-LADRFLPNQLLRS-LIPAHPLGALRLFPRLRRIFPDFRPNNYTFSFLLK 83
Query: 120 ACSQ------------LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
A + +H++ ++H+ + L + +V N L+H Y + A+
Sbjct: 84 AAADSSAPPSLGPDYPFGAHAIVPSLHALAVVLAWDAHAYVANGLIHAYATHGVVPSARR 143
Query: 168 LFDEILYR---DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
LF++ L DV S +L+ KAG + AR LFD MP R+ V+W +++ Y +
Sbjct: 144 LFEDALASRAADVCSWTSLLTACAKAGQVEEARALFDGMPRRNDVAWSAMLSAYVAAGSF 203
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ------IRVDS 278
++A++LF +M+ ++P+ A+V L+AC LG L+QG+ +H + +D
Sbjct: 204 DDAVRLFEDMLRSGVRPNRAAVVGVLAACGALGALDQGRWVHALLVSGTHGGDGATAMDG 263
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESS---QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
++T LVD YAKCG ++TA ++F ++ ++++F + AM+ GL+ HG ++ F +M
Sbjct: 264 VVATALVDMYAKCGSLDTARQVFAAAAPRSQRDVFAYTAMISGLSDHGRCGEAIDLFGQM 323
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
++P+ VT + L C AGLV A+++F M +V+G+ ++HYGC+ D+LGRAGL
Sbjct: 324 QAEGVRPNEVTFICVLTACGRAGLVGRAKEVFRSMAAVHGMEPGVEHYGCLVDVLGRAGL 383
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
+ EA+E ++ M M D +V LL C HG+VE E + +L + GV+ L+++
Sbjct: 384 LAEAMETVRSMTMRPDAYVLGALLNACAAHGDVEAGEQVVRWLAELGLDHSGVHVQLSNM 443
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
YA +WE+V+K+RR++D K+ K GCS+++++G
Sbjct: 444 YAGWSKWEEVLKVRRTMDQRKVAKVPGCSMLEVDG 478
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 237/441 (53%), Gaps = 34/441 (7%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
S+ ++I A++ + +F +M I PD +L + S A+ H +
Sbjct: 306 SWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLI 365
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI------------------------- 172
++ + D V N+L+ +YC F L+ A++ F +
Sbjct: 366 IRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIH 425
Query: 173 -------LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE 225
+ +V N+LID Y K+G+L AR++F R+P RD V+W TL++ YA
Sbjct: 426 CYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFA 484
Query: 226 EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLV 285
EA+ L+ M+ D+KP++ LVS LSAC+ L LE+G+ +H YI + + ++T L+
Sbjct: 485 EALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALI 544
Query: 286 DFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV 345
D YAKCG + + EIF S E+++ TWN M+ G MHG R ++ +F +M E+ KP+G+
Sbjct: 545 DMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGL 604
Query: 346 TILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKK 405
T L L C+HAGLV E + LF +M+ Y V+ LKHY CM DLLGR+G ++EA ++
Sbjct: 605 TFLAVLSACAHAGLVKEGKYLFGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEALVLS 663
Query: 406 MPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDV 465
MP+ D VW LL C+IH +E+ A+H + E+ G Y +++++Y++ +WE+
Sbjct: 664 MPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGKWEEA 723
Query: 466 VKIRRSLDAGKIKKNAGCSLI 486
K R + ++K G S +
Sbjct: 724 EKARGIMKERGVRKKTGWSAV 744
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 150/357 (42%), Gaps = 48/357 (13%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTF-KPISSASSPTTDPLSYALSIFNN 70
++K + Q HA +T G + + I + ++ +F KP S + +F+
Sbjct: 47 SLKTLLQSHAFIITSG--YSNNIFIASKLISLYASFHKP------------SCSTELFDE 92
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
IP+ F +N+II+AH A+ + MR P+ ++ P ++ +C++L +
Sbjct: 93 IPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYG 152
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
++IH V KLG + S + + Y K
Sbjct: 153 RSIHGLVSKLGLFSGSSAVGS------------------------------SFVYMYSKC 182
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD---IKPDNIALV 247
G L A +FD + FRD V+W LV G Q+ + + ++ C M + +P+ L
Sbjct: 183 GVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLE 242
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
AC LG L +G+ +H + + + + L+ Y+KCG A F K
Sbjct: 243 GGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNK 302
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++ +W +M+ + G + F M+ + I PDG+ I L S++ V EA+
Sbjct: 303 DIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAK 359
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 41/265 (15%)
Query: 108 PPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
P DF LL +Q+ S H+ ++ G+ ++F+ + L+ +Y FH+ + E
Sbjct: 31 PNDFNYLNHLLS--NQISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTE 88
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
LFDEI P RDA W +++ + + + A
Sbjct: 89 LFDEI-------------------------------PHRDAFLWNSIIKAHFSNGEYSRA 117
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI-ELNQIRVDSFLSTGLVD 286
+ + M + P++ + +++CA L + G++IH + +L S + + V
Sbjct: 118 LDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVY 177
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGV- 345
Y+KCG + A +F+ +++ W A+++G +G ++ L M RI DG
Sbjct: 178 MYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEM--HRIGGDGER 235
Query: 346 ----TILGALVGCSHAGLVDEARKL 366
T+ G C + G + E R L
Sbjct: 236 PNFRTLEGGFQACGNLGALLEGRCL 260
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 124/289 (42%), Gaps = 33/289 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A IF IP ++NT+I ++ A+ L+ +M + P+ + +L A
Sbjct: 453 LTIARRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSA 511
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L S + +H+ + F ++ + +L+ +Y +L ++E+F+ + RDV++
Sbjct: 512 CSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITW 571
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I GY GD AR AI+ F M + K
Sbjct: 572 NVMISGYGMHGD---ARS----------------------------AIEFFQQMEESSAK 600
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ + ++ LSACA G +++GK + ++ + + +VD + G + A +
Sbjct: 601 PNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEAL 660
Query: 301 FESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
S + W A+L +H + + I++ ++ DG ++
Sbjct: 661 VLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVM 709
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 117/319 (36%), Gaps = 63/319 (19%)
Query: 174 YRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCN 233
Y VV + L+ Y K G+ A + F + +D +SW ++++ Y++ E I +F
Sbjct: 271 YSQVVQ-SLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWE 329
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M+ I PD I + LS+ + + + K H I +D + L+ Y K G+
Sbjct: 330 MLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGF 389
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF--------------------- 332
+ A + F E+N WN M+ G L R Y
Sbjct: 390 LKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGK 449
Query: 333 ------SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM---------ESVYGVS 377
+R I RI D VT + +H G EA L+D+M ++ V
Sbjct: 450 SGNLTIARRIFCRIPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVL 509
Query: 378 KELKHYGCMA-------------------------DLLGRAGLIEEALEMIKKMPMGGDV 412
H + D+ + G +E++ E+ M DV
Sbjct: 510 SACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHE-RDV 568
Query: 413 FVWSGLLGGCRIHGNVEIA 431
W+ ++ G +HG+ A
Sbjct: 569 ITWNVMISGYGMHGDARSA 587
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 258/489 (52%), Gaps = 12/489 (2%)
Query: 2 TLNNFIKRCKTIKQI-HQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
TL +K C ++ H + H + L F+ + +L++ +SA S
Sbjct: 112 TLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSY------ASAGS----- 160
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L + F+ + + S+N++I + + A LF MR + D ++ LL A
Sbjct: 161 LGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFA 220
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS + + +HS +L G D+ + N+L+ +Y L A FD + +++ VS
Sbjct: 221 CSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSW 280
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+++ K + AR F+++P + +SW +++ Y Q + EA+ L+ M L +
Sbjct: 281 TSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLA 340
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD L + LSAC +LG+L GK IH I N L L+D YA+CG ++TAI +
Sbjct: 341 PDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISL 400
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F KN+ +WNA++ LAMHG + +L++F M+ PD +T + L C+H GL+
Sbjct: 401 FSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLL 460
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + F M VY V ++HY CM DLLGR G + +A+++IK MPM DV VW LLG
Sbjct: 461 EAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLG 520
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHG+++I + + +++L+ GG++ +++++ +WED+ ++R+ + +KKN
Sbjct: 521 ACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKN 580
Query: 481 AGCSLIQLN 489
G S I+ N
Sbjct: 581 MGVSSIETN 589
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 206/460 (44%), Gaps = 77/460 (16%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+ ++RC ++ +++Q+HAH + G+ +T+ S + P +
Sbjct: 15 VRELLRRCGSVHRLNQLHAHLVVHGV-------------DDVTSQILASYCALPAGGGVW 61
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA +F+ IP P F YN++IRA+ P A+ L M I P+ ++ PFLL+AC+
Sbjct: 62 YARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACA 121
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
++ + H V+KLGF+ VFV N+L+H Y L D++ FDE++ R+VVS N+
Sbjct: 122 RVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 181
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I+GY +AG+ EA LF M + D
Sbjct: 182 MINGYAQAGN-------------------------------TREACSLFEGMRRQGLLAD 210
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG---------- 292
LVS L AC+ G LE GK +H ++ + R+D L+ LVD Y KCG
Sbjct: 211 EFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFD 270
Query: 293 ---------------------YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
I+ A + FE EK++ +WNAM+ G +L
Sbjct: 271 MMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDL 330
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
++RM + PD T+ L C G + + + D + + + + + + D+
Sbjct: 331 YNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFNSLLDMYA 389
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
R G ++ A+ + +MP +V W+ ++G +HG + A
Sbjct: 390 RCGQVDTAISLFSEMP-SKNVISWNAIIGALAMHGRAQDA 428
>gi|297848728|ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338087|gb|EFH68504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 664
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 262/520 (50%), Gaps = 50/520 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I CK + +HAH L +G+L + + S SS P Y+
Sbjct: 34 SLIHTCKDTVSLRLVHAHILRRGVL-------------SSRVAAQLVSCSSLLKSP-DYS 79
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
LSIF N + F +N +IR T + +V F M T+ + PD +FPF+L++ S+L
Sbjct: 80 LSIFRNSEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSKL 139
Query: 125 CSHSLAQTIHSQVLKLGFICDVFV-----------------------------------L 149
L + +H+ LK CD FV
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLW 199
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
N L++ YC ++ A LF + R+ S +TLI GYV G+L A+QLF+ MP ++ V
Sbjct: 200 NVLVNGYCRAKDMQMATTLFRSMPERNSGSWSTLIKGYVDNGELNRAKQLFELMPEKNVV 259
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW TL+ G++Q+ E AI + M++ +KP+ + + LSAC++ G L G IH YI
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIRIHGYI 319
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
N I++D + T L+D YAKCG ++ A +F + K++ +W AM+ G A+HG ++
Sbjct: 320 LDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAI 379
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F +M+ + KPD V L L C ++G VD FD M Y + LKHY + DL
Sbjct: 380 QCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDL 439
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
LGRAG ++EA E+++ MP+ D+ W+ L C+ H + + +++++L PE G Y
Sbjct: 440 LGRAGKLDEAHELVEYMPINPDLTTWAALYRACKAHKSNR-TDIVLQNLLELDPELRGSY 498
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
L +A +++DV K R SL +++ GCS I+L+
Sbjct: 499 IFLDKTHAAKGKYQDVEKRRLSLQKKVKERSMGCSYIELD 538
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 65/356 (18%)
Query: 90 SSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVL 149
SSP A + F R S PD F L+ C S L +H+ +L+ G VL
Sbjct: 12 SSP--AKIYFPADRRAS--PDESHFISLIHTCKDTVSLRL---VHAHILRRG------VL 58
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
+S R A +L VSC++L+ K+ D ++ +F R+
Sbjct: 59 SS-----------RVAAQL---------VSCSSLL----KSPD--YSLSIFRNSEERNPF 92
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
+ L+ G ++ + E +++ F M+ L +KPD + L + ++LG G+ +H
Sbjct: 93 VFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAAT 152
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS----QEKNLFTWNAMLVGLAMHGLG 325
N + DSF+ LVD YAK G +N A ++FE + +++++ WN ++ G
Sbjct: 153 LKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLWNVLVNGYCRAKDM 212
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC 385
+++ F M E R T++ V G ++ A++LF+ M K + +
Sbjct: 213 QMATTLFRSMPE-RNSGSWSTLIKGYVD---NGELNRAKQLFELMP-----EKNVVSWTT 263
Query: 386 MADLLGRAGLIEEAL----EMIKKMPMGGDVFVW--------SGLLG-GCRIHGNV 428
+ + + G E A+ EM++K + V SG LG G RIHG +
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIRIHGYI 319
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 232/421 (55%), Gaps = 31/421 (7%)
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
++++P ++N +I ++ L+AV LFS+M + I + + +L++ + L +
Sbjct: 342 YDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAI 401
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
+ + IH+ +K G D +V+NSL+ D Y
Sbjct: 402 KVCKQIHTISIKSGIYSDFYVINSLL-------------------------------DTY 430
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
K + A ++F+ + D V++ +++ Y+Q EEA++L+ M D DIKPD
Sbjct: 431 GKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICS 490
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L+ACA L EQGK +H + D F S LV+ YAKCG I A F +
Sbjct: 491 SLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNR 550
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +W+AM+ G A HG G+ +L F++M+ + P+ +T++ L C+HAGLV+E ++ F
Sbjct: 551 GIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYF 610
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
++ME ++G+ +HY CM DLLGR+G + EA+E++ +P D FVW LLG RIH N
Sbjct: 611 EKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKN 670
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+E+ + AA+ + L+PE G + +LA++YA+A WE+V K+R+ + K+KK G S I+
Sbjct: 671 IELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIE 730
Query: 488 L 488
+
Sbjct: 731 I 731
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 165/361 (45%), Gaps = 33/361 (9%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
YA + + S+++++ + A+++F++M + + + ++FP +L+A
Sbjct: 32 FGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKA 91
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS ++ + +H + GF D FV
Sbjct: 92 CSMKRDLNMGRKVHGMAVVTGFESDGFV-------------------------------A 120
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NTL+ Y K G L +R+LF + R+ VSW L + Y QS+ C EA+ LF M+ I
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P+ ++ L+ACA L E + G+ IH + + +D F + LVD Y+K G I A+ +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ ++ +WNA++ G +H L+L+ M + +P+ T+ AL C+ G
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ R+L + + S G + D+ + ++++A MP D+ W+ L+
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVG-LVDMYSKCEMMDDARRAYDSMPK-KDIIAWNALIS 358
Query: 421 G 421
G
Sbjct: 359 G 359
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 177/431 (41%), Gaps = 84/431 (19%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F I + S+N + + AV LF +M I P+ +S +L AC+ L
Sbjct: 139 LFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQE 198
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
L + IH +LK+G D F S N L+D
Sbjct: 199 GDLGRKIHGLMLKMGLDLDQF-------------------------------SANALVDM 227
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y KAG++ A +F + D VSW ++AG D + A+ L M +P+ L
Sbjct: 228 YSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTL 287
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
SAL ACA +G E G+ +H + D F + GLVD Y+KC ++ A ++S +
Sbjct: 288 SSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPK 347
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI---------LGALVGCSH- 356
K++ WNA++ G + G ++ FS+M I + T+ L A+ C
Sbjct: 348 KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQI 407
Query: 357 ------AGL-------------------VDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
+G+ +DEA K+F+E ++L Y M
Sbjct: 408 HTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEER-----TWEDLVAYTSMITAYS 462
Query: 392 RAGLIEEALEMIKKMP---MGGDVFVWSGLLGGCRIHGNVEIAEAAAE-HVMKLKPEDGG 447
+ G EEAL++ +M + D F+ S LL C N+ E + HV +K
Sbjct: 463 QYGDGEEALKLYLQMQDADIKPDPFICSSLLNAC---ANLSAYEQGKQLHVHAIK----- 514
Query: 448 VYKVLADVYAN 458
+ + D++A+
Sbjct: 515 -FGFMCDIFAS 524
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 138/314 (43%), Gaps = 46/314 (14%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
+ IK QIH + G+ S +++ ++L I AS IF
Sbjct: 399 QAIKVCKQIHTISIKSGIY--SDFYVINSLLDTYGKCNHIDEASK-----------IFEE 445
Query: 71 IPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLA 130
+ +Y ++I A++ + A+ L+ QM+ I PD + LL AC+ L ++
Sbjct: 446 RTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQG 505
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
+ +H +K GF+CD+F NSL+++Y + DA F EI R +VS + +I GY +
Sbjct: 506 KQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQH 565
Query: 191 GDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSAL 250
G H + EA++LF M+ + P++I LVS L
Sbjct: 566 G---HGK----------------------------EALRLFNQMLRDGVPPNHITLVSVL 594
Query: 251 SACARLGELEQGKNIHRYIE-LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKN 308
AC G + +GK +E + I+ ++D + G +N A+E+ S E +
Sbjct: 595 CACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEAD 654
Query: 309 LFTWNAMLVGLAMH 322
F W A+L +H
Sbjct: 655 GFVWGALLGAARIH 668
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 175 RDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM 234
RD N L+ Y K +AR+L D D VSW +L++GY Q+ EEA+ +F M
Sbjct: 14 RDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEM 73
Query: 235 MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
L +K + S L AC+ +L G+ +H + D F++ LV YAKCG +
Sbjct: 74 CLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLL 133
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+ + +F E+N+ +WNA+ L ++ F M+ + I P+ +I L C
Sbjct: 134 DDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNAC 193
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ D RK+ M + G+ + + D+ +AG IE A+ + + + DV
Sbjct: 194 AGLQEGDLGRKIHGLMLKM-GLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAH-PDVVS 251
Query: 415 WSGLLGGCRIHGNVEIA 431
W+ ++ GC +H ++A
Sbjct: 252 WNAIIAGCVLHDCNDLA 268
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 245/437 (56%), Gaps = 11/437 (2%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMR-TVSIPPDFYSFPFLLR 119
L A+++ P P+ Y + I AH+ A+ L S+M + + P ++ L
Sbjct: 78 LDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLP 137
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD-VV 178
AC L ++ + +H +KL + +V +L+ +Y A+ LFD + VV
Sbjct: 138 ACGGL---AVGRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVV 194
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S ++ Y K G L AR LFD +P +D + W ++ GY Q + EA++LF M+
Sbjct: 195 SVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSG 254
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYI---ELNQIRVDSFLSTGLVDFYAKCGYIN 295
++PD +++V ALSA A+LG E G+ +H ++ ++R+++ + T L+D Y KCG +
Sbjct: 255 VEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLE 314
Query: 296 TAIEIFE--SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
A+ +F + ++++ WNAM+ G AMHG R +L F ++ + P +T +G L
Sbjct: 315 DAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNA 374
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP-MGGDV 412
CSH+GLVDE R+LF M YG+ +++HYGCM DLLGRAG +EEA E+++ M D
Sbjct: 375 CSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDA 434
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
+W+ LL CR+H N+E+ + A+H++ + G Y +L+++YA A W +V ++R +
Sbjct: 435 VMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMM 494
Query: 473 DAGKIKKNAGCSLIQLN 489
A I+K GCS +++
Sbjct: 495 RASGIQKEPGCSAVEVG 511
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 258/489 (52%), Gaps = 19/489 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ RC T+ + Q+H + + TTF+ + AS + L YA
Sbjct: 16 LSRCATLAHLKQLHGRSV-----------VTARAASQSTTFQLLRFASLRLS-CLPYARR 63
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPL----NAVVLFSQMRTVSIP-PDFYSFPFLLRAC 121
+F++ P+P+ F Y+ ++ A+ S +A+ LF +M P P+ + +P +LRA
Sbjct: 64 LFDSTPHPNVFLYSAMLSAYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYPLVLRAA 123
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L ++IHS K GF + SL+ Y + + DA++LFD + R+V+S
Sbjct: 124 CAI-GVQLVRSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLDARKLFDGLTERNVISWT 182
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
L+ GY +AG + A LFDRMP RD +W ++ G Q+ EA+ + M+D +
Sbjct: 183 ALVSGYARAGKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRMVDEGFQL 242
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ + LSAC LG L+ GK +H Y + + S + GL+D Y KCG + A +F
Sbjct: 243 NGTTVSCVLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEARWMF 302
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
+ +++L TWN+++ LA+HG + ++ F M + I+PD VT +G L C+H G VD
Sbjct: 303 DEFSDRSLTTWNSLINCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHGGFVD 362
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E F M + E++HYGC+ DLLGRAG E+A+ +I M + D +W LL
Sbjct: 363 EGLTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNA 422
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI-KKN 480
CR H +E+AE + +++L P + +LA++Y+ WE+V KIR+ + + KK
Sbjct: 423 CRTHRQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKL 482
Query: 481 AGCSLIQLN 489
GCS I+++
Sbjct: 483 PGCSWIEVD 491
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 230/425 (54%), Gaps = 33/425 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +IF+N+ + S+N +I + L PL A+ QM+ P+ +F +L AC++
Sbjct: 416 ASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACAR 475
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + IH+ +++G D+FV NSL
Sbjct: 476 LGFLGPGKEIHAMGVRIGLTSDLFVSNSL------------------------------- 504
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G L AR +F+ +D VS+ L+ GY+++D C +++ LF M L KPD
Sbjct: 505 IDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDV 563
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
++ V +SACA L L+QGK +H N + F+S L+DFY KCG I+ A +F
Sbjct: 564 VSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQ 623
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K++ +WN M++G M G ++ F M + ++ D V+ + L CSH GLV+
Sbjct: 624 ILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERG 683
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F EM + E+ HY CM DLLGRAG +EEA ++I+++P+ D +W LLG CR
Sbjct: 684 WQYFSEMLAQRLEPTEM-HYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACR 742
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
I+GNVE+ AAEH+ +LKP+ G Y +L+++YA RW++ KIR + + KKN GC
Sbjct: 743 IYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGC 802
Query: 484 SLIQL 488
S +Q+
Sbjct: 803 SWVQI 807
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 137/276 (49%), Gaps = 35/276 (12%)
Query: 75 STFSYNTIIRAHTL-FSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
+ F +NT+IRAH++ ++ + +++M + D ++FPF+L+ CS +
Sbjct: 122 TAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEV 181
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H V KLGF DV+V N+L+ +Y L DA+ LFDE+ RDVVS NT+I GD
Sbjct: 182 HGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDY 241
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
AR + M R IKP+ ++++S L
Sbjct: 242 TEARNYYFWMILRSV------------------------------IKPNLVSVISLLPIS 271
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLST--GLVDFYAKCGYINTAIEIFESSQEKNLFT 311
A L + E + IH Y ++ +DS ++T LVD Y KCG + ++F + EKN +
Sbjct: 272 AALEDEEMTRRIHCYSV--KVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 329
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
WN+++ GLA G +L F MI+A +P+ VTI
Sbjct: 330 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTI 365
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 150/341 (43%), Gaps = 35/341 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLL 118
L+ A +F+ +P S+NTII ++ A + M R+V I P+ S LL
Sbjct: 210 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV-IKPNLVSVISLL 268
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+ L + + IH +K+G D+Q V
Sbjct: 269 PISAALEDEEMTRRIHCYSVKVGL---------------------DSQ----------VT 297
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+CN L+D Y K G + Q+F+ ++ VSW +++ G A +C +A+ F M+D
Sbjct: 298 TCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAG 357
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+P+++ + S L L + GK IH + D F++ L+D YAK G+ A
Sbjct: 358 AQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAS 417
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
IF + +N+ +WNAM+ A++ L ++ + +M E P+ VT L C+ G
Sbjct: 418 TIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLG 477
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ +++ M G++ +L + D+ + G + A
Sbjct: 478 FLGPGKEI-HAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSA 517
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 160/371 (43%), Gaps = 46/371 (12%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN + S+N+II +A+ F M P+ + +L +L
Sbjct: 318 VFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELEC 377
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IH +++G D+F+ NSL ID
Sbjct: 378 FKAGKEIHGFSMRMGTETDIFIANSL-------------------------------IDM 406
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K+G A +F + R+ VSW ++A YA + EAI+ M + P+ +
Sbjct: 407 YAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTF 466
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ L ACARLG L GK IH + D F+S L+D YAKCG +++A +F +S+
Sbjct: 467 TNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSR- 525
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K+ ++N +++G + SL FS M KPD V+ +G + C++ + + ++
Sbjct: 526 KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKE- 584
Query: 367 FDEMESVYGVSKELKHY------GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
V+GV+ Y + D + G I+ A + ++ + DV W+ ++
Sbjct: 585 ------VHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI-LFKDVASWNTMIL 637
Query: 421 GCRIHGNVEIA 431
G + G +E A
Sbjct: 638 GYGMIGELETA 648
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A ++FN SYN +I ++ L ++ LFS+MR + PD SF ++ A
Sbjct: 514 LHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISA 572
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + +H L+ +FV NSL+ Y R+ A LF++IL++DV S
Sbjct: 573 CANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASW 632
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT+I GY G+L E AI +F M D ++
Sbjct: 633 NTMILGYGMIGEL-------------------------------ETAISMFEAMRDDTVQ 661
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D ++ ++ LSAC+ G +E+G + ++ T +VD + G++ A ++
Sbjct: 662 YDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKL 721
Query: 301 FES---SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+ + + N+ W A+L ++G L + E + + G IL + + +
Sbjct: 722 IQQLPIAPDANI--WGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNI-YAET 778
Query: 358 GLVDEARKLFDEMES 372
G DEA K+ + M+S
Sbjct: 779 GRWDEANKIRELMKS 793
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 8/264 (3%)
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDR--MPFRDAVSWGTLVAGYAQS-DQC 224
+ + L R V C +LI Y K LF++ R A W TL+ ++ + +
Sbjct: 81 ILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTAFLWNTLIRAHSIAWNGT 140
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
+ + + M+ ++ D+ L C+ ++ +G +H + D ++ L
Sbjct: 141 FDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTL 200
Query: 285 VDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHG-LGRLSLVYFSRMIEARIKPD 343
+ Y CG++N A +F+ E+++ +WN ++ L+++G YF ++ + IKP+
Sbjct: 201 LMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPN 260
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESV-YGVSKELKHYGCMADLLGRAGLIEEALEM 402
V+++ L A L DE SV G+ ++ + D G+ G ++ ++
Sbjct: 261 LVSVISLLP--ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQV 318
Query: 403 IKKMPMGGDVFVWSGLLGGCRIHG 426
+ +V W+ ++ G G
Sbjct: 319 FNETVEKNEV-SWNSIINGLACKG 341
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 236/431 (54%), Gaps = 3/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + +P + S+ T+I H + AV L+SQM P+ F +L A
Sbjct: 331 LDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSA 390
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L IH++ LK+G +VFV +SL+ +YC + RDAQ +FD + +++V
Sbjct: 391 CATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCW 450
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+L GY G + A LF +MP R+ SW T+++GYAQ+ Q +A++ F M+
Sbjct: 451 NSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQV 510
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P I S L ACA L L GK H + I+L + F+ T L D YAK G + ++
Sbjct: 511 PGEITFSSVLLACANLCSLVTGKMAHAKTIKLG-MEESIFIGTALSDMYAKSGDLQSSKR 569
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F E+N TW AM+ GLA +G S++ M+ + P+ T L L CSH GL
Sbjct: 570 MFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGL 629
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
V++A F++M++ +G+S + KHY CM D+L RAG + EA ++ K P + W+ LL
Sbjct: 630 VEQAIHYFEKMQA-WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALL 688
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C + N EI E AA+ + +L ++ Y +L+++YA+ RW+D +IR + +KK
Sbjct: 689 SACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKK 748
Query: 480 NAGCSLIQLNG 490
+ GCS +Q+ G
Sbjct: 749 DGGCSWVQVRG 759
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 183/404 (45%), Gaps = 46/404 (11%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ ++ P S + I NA+ +F +M + + P+ +F +++AC
Sbjct: 201 AVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVG 260
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
LA +I +K F + V NSL+ +Y A+++FDE+ +DVVS
Sbjct: 261 AGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTA 320
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y ++GDL AR++ D MP R+ VSWGTL+A + Q EA++L+ M+ +P+
Sbjct: 321 LLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPN 380
Query: 243 NIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
S LSACA L +L G IH R +++ + F+S+ L+D Y KC A IF
Sbjct: 381 ISCFSSVLSACATLEDLRGGARIHARSLKMGS-STNVFVSSSLIDMYCKCKKCRDAQTIF 439
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK-------------------- 341
++ EKN+ WN++ G + +G ++ F +M +
Sbjct: 440 DTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALR 499
Query: 342 -----------PDGVTILGALVGCSH-----AGLVDEARKLFDEMESVYGVSKELKHYGC 385
P +T L+ C++ G + A+ + ME + L
Sbjct: 500 SFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTAL----- 554
Query: 386 MADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
+D+ ++G ++ + M +MP DV W+ ++ G +G E
Sbjct: 555 -SDMYAKSGDLQSSKRMFYQMPERNDV-TWTAMIQGLAENGFAE 596
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 136/332 (40%), Gaps = 49/332 (14%)
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHR--------------------------- 161
LA ++H+ ++ G D V + L+ Y F R
Sbjct: 100 LALSLHAHAVRSGVAADTSVASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDFMVH 159
Query: 162 -------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+ A+ LFD + R+VVS T++D +K G +A A +L+++ P +
Sbjct: 160 EHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTAT 219
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI-HRYIELNQ 273
++G+ +++ A+ +F M+ ++P+ I V + AC GE +I I+ N
Sbjct: 220 ISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNF 279
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
+ L+ Y + G A ++F+ K++ +W A+L + G L
Sbjct: 280 FESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESG----DLDGAR 335
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM------ESVYGVSKELKHYGCMA 387
R+++A + + V+ + G EA KL+ +M ++ S L +
Sbjct: 336 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLE 395
Query: 388 DLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
DL G A + +L KM +VFV S L+
Sbjct: 396 DLRGGARIHARSL----KMGSSTNVFVSSSLI 423
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 247/445 (55%), Gaps = 19/445 (4%)
Query: 61 LSYALSIFNNIPYPS--TFSYNTIIRAHTLFSSPLNAVVLFSQM--------RTVSIPPD 110
L AL + + +P S SYNT+I + A+ +F+Q+ + V+I D
Sbjct: 112 LPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAI--D 169
Query: 111 FYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFD 170
++ AC+ L + +H V+ G V + N+++ Y R+ DA+ +FD
Sbjct: 170 RFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFD 229
Query: 171 EILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQL 230
++ RD VS ++I GY +A L A Q+FD MP +DA++W L++G+ Q+ + E A++L
Sbjct: 230 QMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALEL 289
Query: 231 FCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS---FLSTGLVDF 287
F M + P ALVS L ACA++G + +GK +H +I I D F+ L+D
Sbjct: 290 FERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDM 349
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y+KCG + A+ +F+ E+++ +WN+M+ G + +G G+ SL F RM++ ++P VT
Sbjct: 350 YSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTF 409
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
L L CSHAGLV + R++ + M+ +GV +HY D LGR +EEA E IK +
Sbjct: 410 LAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLS 468
Query: 408 MG---GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWED 464
G W LLG C +HGN+EIAE AE + +L+PE+ G Y +L+++Y+ A +W+D
Sbjct: 469 SKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDD 528
Query: 465 VVKIRRSLDAGKIKKNAGCSLIQLN 489
++R + ++K+ S I++
Sbjct: 529 ARQVRALMKGKGLRKDQAYSWIEVQ 553
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 157/369 (42%), Gaps = 43/369 (11%)
Query: 114 FPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEIL 173
L RA S L +H+ ++K + N L+ +Y + + FD++
Sbjct: 32 LALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLP 91
Query: 174 YRDVVSCNTLIDGYVKA-GDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAIQL 230
+++ S N+L+ + G L A +L D MP R+ VS+ T+++ A+ + EA+++
Sbjct: 92 HKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRV 151
Query: 231 FCNMM------DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGL 284
F + + D +VSA SACA L + + +H + ++ + V ++ +
Sbjct: 152 FAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAM 211
Query: 285 VDFYAKCGYI-------------------------------NTAIEIFESSQEKNLFTWN 313
VD Y+K G + + A+++F+ ++ W
Sbjct: 212 VDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWT 271
Query: 314 AMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL--FDEME 371
A++ G +G ++L F RM + P ++ L C+ GLV +++ F
Sbjct: 272 ALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRR 331
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S+ + + + D+ + G + A+ + +M + D+ W+ ++ G +G + +
Sbjct: 332 SIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM-LERDIISWNSMVTGFSHNGQGKQS 390
Query: 432 EAAAEHVMK 440
A E ++K
Sbjct: 391 LAVFERMLK 399
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 242/472 (51%), Gaps = 44/472 (9%)
Query: 19 IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFS 78
+HA + GL+ + T+++ TT I A +F+N+ S
Sbjct: 281 VHAQCMNAGLV--DDIRVATSLIRMYTTCGSIEGARR-----------VFDNMKVRDVVS 327
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+ +I + + +A LF+ M+ I PD ++ ++ AC+ + + A+ IHSQV
Sbjct: 328 WTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVD 387
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
GF D+ V +L+H+Y K G + ARQ
Sbjct: 388 IAGFGTDLLVSTALVHMYA-------------------------------KCGAIKDARQ 416
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
+FD MP RD VSW ++ Y ++ EA + F M +I+PD + ++ L+AC LG
Sbjct: 417 VFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGA 476
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
L+ G I+ + L L+ AK G + A IF++ +++ TWNAM+ G
Sbjct: 477 LDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGG 536
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
++HG R +L F RM++ R +P+ VT +G L CS AG VDE R+ F + G+
Sbjct: 537 YSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVP 596
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
+K YGCM DLLGRAG ++EA +IK MP+ +WS LL CRIHGN+++AE AAE
Sbjct: 597 TVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERC 656
Query: 439 MKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ + P DG VY L+ +YA A WE+V K+R+ +++ I+K GC+ I++ G
Sbjct: 657 LMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAG 708
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 199/465 (42%), Gaps = 84/465 (18%)
Query: 41 LYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
+Y + T + S T+ A IF+++ + ++N +I + A LF
Sbjct: 92 IYELNTLIKLYSICGNVTE----ARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFR 147
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
QM + P +F +L ACS + + +H+QV+ GF+ D + +L+ +Y
Sbjct: 148 QMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGG 207
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRM------PFR-------- 206
+ DA+++FD + RDV + N ++ GY K+GD A +LF RM P +
Sbjct: 208 SMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILD 267
Query: 207 -----DAVSWG--------------------TLVAGYAQSDQCEEAIQLFCNMMDLD--- 238
+A++WG +L+ Y E A ++F NM D
Sbjct: 268 GCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVS 327
Query: 239 ----------------------------IKPDNIALVSALSACARLGELEQGKNIHRYIE 270
I+PD I + ++ACA L + IH ++
Sbjct: 328 WTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVD 387
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
+ D +ST LV YAKCG I A ++F++ +++ +W+AM+ +G G +
Sbjct: 388 IAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFE 447
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M + I+PDGVT + L C H G +D +++ + + +L + + + L
Sbjct: 448 TFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQ-----AIKADLVSHVPLGNAL 502
Query: 391 ----GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G +E A + M + DV W+ ++GG +HGN A
Sbjct: 503 IIMNAKHGSVERARYIFDTM-VRRDVITWNAMIGGYSLHGNAREA 546
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 165/401 (41%), Gaps = 81/401 (20%)
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+P PS R + F+ + A + ++ D ++ L + C++L +L
Sbjct: 23 QLPVPSA-------RFRSTFTRRVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAAL 75
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ + +++ G +++ LN+L+ +Y +
Sbjct: 76 GKQVRDHIIQGGRQLNIYELNTLIKLYSI------------------------------- 104
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G++ ARQ+FD + + V+W L+AGYAQ +EA LF M+D ++P I +S
Sbjct: 105 CGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSV 164
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
L AC+ L GK +H + D + T LV Y K G ++ A ++F+ +++
Sbjct: 165 LDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDV 224
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG---------------- 353
T+N M+ G A G + F RM + +KP+ ++ L L G
Sbjct: 225 STFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQ 284
Query: 354 CSHAGLVDE-------------------ARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
C +AGLVD+ AR++FD M+ +++ + M + G
Sbjct: 285 CMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMK-----VRDVVSWTVMIEGYAENG 339
Query: 395 LIEEALEMIKKMPMGG---DVFVWSGLLGGCRIHGNVEIAE 432
IE+A + M G D + ++ C I N+ A
Sbjct: 340 NIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAR 380
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 231/422 (54%), Gaps = 31/422 (7%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
IF+ + + S+N+++ + P A+ +F +M I P + L AC+ L
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD 364
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H V +L D+ V+NSL+ +Y R+ D+ S
Sbjct: 365 LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRV-------------DIAS------- 404
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
+F+ + R VSW ++ GYAQ+ + EA+ F M L +KPD+ +
Sbjct: 405 -----------DIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS + A A L K IH I + + + F++T LVD Y+KCG I+ A ++F+ +
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
+++ TWNAM+ G HGLGR +L F +M + ++P+ +T L + CSH+GLVDE +
Sbjct: 514 RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRH 573
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M+ YG+ + HYG M DLLGRAG I+EA + I+ MP+ + V+ +LG C+IH
Sbjct: 574 FKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHK 633
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N+E+ E AA+ + +L P++GG + +LA++YA+ +W V ++R++++ +KK GCS++
Sbjct: 634 NIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVV 693
Query: 487 QL 488
+L
Sbjct: 694 EL 695
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 174/368 (47%), Gaps = 47/368 (12%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C ++K++HQI + GL H+ T L ++ F S ++ A
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLY---NEHLFQTKL--VSLFSKYGS--------INEAA 101
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F I Y+T+++ + SS A+ +MR + P Y+F +LL+ C
Sbjct: 102 RVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA 161
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH Q++ F +VF + ++++Y ++ DA ++FD + RD+VS NT+I
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTII- 220
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
AG++Q+ ++A++L M D +PD+I
Sbjct: 221 ------------------------------AGFSQNGFAKKALELVLRMQDEGQRPDSIT 250
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LV+ L A A +G L GK+IH Y +ST L D Y+KCG + TA IF+
Sbjct: 251 LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD 310
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR- 364
+K + +WN+M+ G +G ++ F +M+E I P GVTI+ AL C+ G ++ +
Sbjct: 311 QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKF 370
Query: 365 --KLFDEM 370
K D++
Sbjct: 371 VHKFVDQL 378
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 71/382 (18%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+NTII + A+ L +M+ PD + +L A +
Sbjct: 201 AYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAAD 260
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + ++IH ++ GF V + L
Sbjct: 261 VGLLMVGKSIHGYAIRAGFAKLVNI-------------------------------STAL 289
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
D Y K G + AR +FD M + VSW +++ GY Q+ + E+AI +F M++ I P
Sbjct: 290 ADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTG 349
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ ++ AL ACA LG+LE+GK +H++++ + D + L+ Y+KC ++ A +IF +
Sbjct: 350 VTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI------LGALVGCSHA 357
+ +WNAM++G A +G +L FS M +KPD T+ L L HA
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469
Query: 358 -----------------------------GLVDEARKLFDEMESVYGVSKELKHYGCMAD 388
G + ARKLFD + + ++ + M D
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT-----WNAMID 524
Query: 389 LLGRAGLIEEALEMIKKMPMGG 410
G GL AL++ KM G
Sbjct: 525 GYGTHGLGRAALDLFDKMKKGA 546
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 3/288 (1%)
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
LY + + L+ + K G + A ++F+ + + + T++ GYA++ E A+ C
Sbjct: 77 LYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLC 136
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M D+KP L C +L++GK IH + N + F TG+V+ YAKC
Sbjct: 137 RMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALV 352
I+ A ++F+ E++L +WN ++ G + +G + +L RM + +PD +T++ L
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 353 GCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDV 412
+ GL+ + + G +K + +AD+ + G +E A + M V
Sbjct: 257 AAADVGLLMVGKSIHGYAIRA-GFAKLVNISTALADMYSKCGSVETARLIFDGMDQ-KTV 314
Query: 413 FVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANAD 460
W+ ++ G +G E A A E +++ + GV ++ ++A AD
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV-TIMEALHACAD 361
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 33/261 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IFNN+ + S+N +I + A+ FS+M+++ + PD ++ ++ A ++
Sbjct: 403 ASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAE 462
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L A+ IH +++ ++FV +L+ +Y + A++LFD I R V++ N +
Sbjct: 463 LSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAM 522
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
IDGY GT G A A+ LF M ++P++
Sbjct: 523 IDGY------------------------GTHGLGRA-------ALDLFDKMKKGAVEPND 551
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIEIFE 302
I +S +SAC+ G +++G + ++ + S G +VD + G I A + E
Sbjct: 552 ITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIE 611
Query: 303 SSQ-EKNLFTWNAMLVGLAMH 322
+ + + AML +H
Sbjct: 612 NMPISPGITVYGAMLGACKIH 632
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 241/432 (55%), Gaps = 8/432 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ +A +F+ +P + SYN++I + + A LF M + S+ +L
Sbjct: 176 IEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLED--KNLISWNSMLGG 233
Query: 121 CSQLCSH-SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+Q LA + ++ + D+ N+++ + R+ A LF+ + RDV+S
Sbjct: 234 FAQTKDGIGLALELFEKMPER----DLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVIS 289
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLD 238
+ +IDGY K GD+ AR LFD MP +D V++ T++AGYAQ+ EA+++F M +
Sbjct: 290 WSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSN 349
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ PD LV ALSA ++LG +E+ ++H Y N I V ++ L+D Y+KCG I AI
Sbjct: 350 LSPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAI 409
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
IF+ +K + WNAM+ G+A +GLG+L+ M +KPDG+T +G L C+HAG
Sbjct: 410 LIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAG 469
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV E F+ M V+ + +L+HYGCM D+LG+AGL+E AL+ I++MP+ + +W L
Sbjct: 470 LVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTL 529
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+ H N I E A+H+M + + Y +L+++YA W K+R + +
Sbjct: 530 LSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLT 589
Query: 479 KNAGCSLIQLNG 490
K GCS I+L G
Sbjct: 590 KVPGCSWIELEG 601
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 230/456 (50%), Gaps = 38/456 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C+T ++Q+HA + G L S ++TT ++S SSP + +A
Sbjct: 20 LLRHCETQNDVNQVHARIIKTGYLKNS----------SLTTKIILNSISSPHKPLVEFAR 69
Query: 66 SIF----------NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFP 115
+F N F +N +I++++ + P+ A+VLF M D +SF
Sbjct: 70 YVFFTRYAVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFS 129
Query: 116 FLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
+L+AC+++C + IH ++KL ++F+LN L+ +Y + A+++FD + +
Sbjct: 130 LILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQ 189
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDA--VSWGTLVAGYAQS-DQCEEAIQLFC 232
D VS N++IDGYVK+G + AR+LFD MP D +SW +++ G+AQ+ D A++LF
Sbjct: 190 DSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFE 249
Query: 233 NMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG 292
M + D+ ++ + + A+ G +E ++ + + D + ++D YAK G
Sbjct: 250 KMPERDL----VSWNTIIGGFAKCGRIEFAHSLFNRMP----KRDVISWSNMIDGYAKLG 301
Query: 293 YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGAL 351
I A +F+ +K++ +N ++ G A +G +L F M ++ + PD T++ AL
Sbjct: 302 DIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVAL 361
Query: 352 VGCSHAGLVDEARKLFDE-MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
S G V++A + + +E+ G+S K + D+ + G IE A+ + + G
Sbjct: 362 SAISQLGHVEKAASMHNYFLEN--GISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKG 419
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAA--AEHVMKLKPE 444
+ W+ ++ G +G ++A H + +KP+
Sbjct: 420 -IDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPD 454
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 253/493 (51%), Gaps = 51/493 (10%)
Query: 2 TLNNFIKRCKT---IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
T +K C I + Q+H + G F+ ++ ++++ + K AS
Sbjct: 36 TFPAVLKSCAKFVGIGEGRQVHGVIIKMG--FVCNIYVENSLVHFYSVCKRFGDASR--- 90
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
+F+ + S+ +I + AV LF +M + P+ +F +L
Sbjct: 91 --------VFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRM---DVEPNAATFVSVL 139
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC + S+ + IH K F + V N+LM
Sbjct: 140 VACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALM------------------------- 174
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
D YVK G L A+Q+FD + +D VSW ++++G Q + +EA++LF +M
Sbjct: 175 ------DMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSG 228
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
I+PD I L S LSACARLG L+ G+ +H +I+ I+ D + T +VD YAKCG I ++
Sbjct: 229 IEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSM 288
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+IF KN+ TWNA+L GLAMHG L F M+ ++P+ VT L L C H G
Sbjct: 289 QIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCG 348
Query: 359 LVDEARKLFDEME-SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
LV+E R+ F+ M+ Y + L+HYGCM DLL RA L++EALE+ K MPM DV +
Sbjct: 349 LVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGA 408
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
LL C+ +GN E+ + + ++L D GVY +L++++A RW+DV +IRR + I
Sbjct: 409 LLSACKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGI 468
Query: 478 KKNAGCSLIQLNG 490
KK G ++I+L+G
Sbjct: 469 KKPPGSTVIELDG 481
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 176/349 (50%), Gaps = 36/349 (10%)
Query: 79 YNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVL 138
+N ++ + + P A +++ ++ PD ++FP +L++C++ + +H ++
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 139 KLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQ 198
K+GF+C+++V NSL+H Y V R DA +FDE+L RDVVS +I GYV+AG
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAG------- 114
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
LFD EA+ LF M D++P+ VS L AC R G
Sbjct: 115 LFD------------------------EAVGLFLRM---DVEPNAATFVSVLVACGRKGY 147
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
L GK IH + V +S L+D Y KCG + A ++F+ EK++ +W +++ G
Sbjct: 148 LSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISG 207
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
L + +L F M + I+PDG+ + L C+ G +D R + + ++ +
Sbjct: 208 LVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDR-KAIKW 266
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+++ M D+ + G IE ++++ MP +V W+ LL G +HG+
Sbjct: 267 DIQIGTAMVDMYAKCGCIEMSMQIFNGMPH-KNVLTWNALLNGLAMHGH 314
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 230/425 (54%), Gaps = 33/425 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +IF+N+ + S+N +I + L PL A+ QM+ P+ +F +L AC++
Sbjct: 267 ASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACAR 326
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + IH+ +++G D+FV NSL
Sbjct: 327 LGFLGPGKEIHAMGVRIGLTSDLFVSNSL------------------------------- 355
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
ID Y K G L AR +F+ +D VS+ L+ GY+++D C +++ LF M L KPD
Sbjct: 356 IDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDV 414
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
++ V +SACA L L+QGK +H N + F+S L+DFY KCG I+ A +F
Sbjct: 415 VSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQ 474
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K++ +WN M++G M G ++ F M + ++ D V+ + L CSH GLV+
Sbjct: 475 ILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERG 534
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ F EM + E+ HY CM DLLGRAG +EEA ++I+++P+ D +W LLG CR
Sbjct: 535 WQYFSEMLAQRLEPTEM-HYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACR 593
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
I+GNVE+ AAEH+ +LKP+ G Y +L+++YA RW++ KIR + + KKN GC
Sbjct: 594 IYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGC 653
Query: 484 SLIQL 488
S +Q+
Sbjct: 654 SWVQI 658
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 117/240 (48%), Gaps = 34/240 (14%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D ++FPF+L+ CS +H V KLGF DV+V N+L+ +Y L DA+ LF
Sbjct: 9 DDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLF 68
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
DE+ RDVVS NT+I GD AR + M R
Sbjct: 69 DEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV--------------------- 107
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLST--GLVDF 287
IKP+ ++++S L A L + E + IH Y ++ +DS ++T LVD
Sbjct: 108 ---------IKPNLVSVISLLPISAALEDEEMTRRIHCYSV--KVGLDSQVTTCNALVDA 156
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y KCG + ++F + EKN +WN+++ GLA G +L F MI+A +P+ VTI
Sbjct: 157 YGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTI 216
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 150/341 (43%), Gaps = 35/341 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLL 118
L+ A +F+ +P S+NTII ++ A + M R+V I P+ S LL
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV-IKPNLVSVISLL 119
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
+ L + + IH +K+G D+Q V
Sbjct: 120 PISAALEDEEMTRRIHCYSVKVGL---------------------DSQ----------VT 148
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+CN L+D Y K G + Q+F+ ++ VSW +++ G A +C +A+ F M+D
Sbjct: 149 TCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAG 208
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+P+++ + S L L + GK IH + D F++ L+D YAK G+ A
Sbjct: 209 AQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAS 268
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
IF + +N+ +WNAM+ A++ L ++ + +M E P+ VT L C+ G
Sbjct: 269 TIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLG 328
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ +++ M G++ +L + D+ + G + A
Sbjct: 329 FLGPGKEI-HAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSA 368
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 160/371 (43%), Gaps = 46/371 (12%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN + S+N+II +A+ F M P+ + +L +L
Sbjct: 169 VFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELEC 228
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IH +++G D+F+ NSL ID
Sbjct: 229 FKAGKEIHGFSMRMGTETDIFIANSL-------------------------------IDM 257
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K+G A +F + R+ VSW ++A YA + EAI+ M + P+ +
Sbjct: 258 YAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTF 317
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ L ACARLG L GK IH + D F+S L+D YAKCG +++A +F +S+
Sbjct: 318 TNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSR- 376
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K+ ++N +++G + SL FS M KPD V+ +G + C++ + + ++
Sbjct: 377 KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKE- 435
Query: 367 FDEMESVYGVSKELKHY------GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
V+GV+ Y + D + G I+ A + ++ + DV W+ ++
Sbjct: 436 ------VHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI-LFKDVASWNTMIL 488
Query: 421 GCRIHGNVEIA 431
G + G +E A
Sbjct: 489 GYGMIGELETA 499
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A ++FN SYN +I ++ L ++ LFS+MR + PD SF ++ A
Sbjct: 365 LHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISA 423
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + + +H L+ +FV NSL+ Y R+ A LF++IL++DV S
Sbjct: 424 CANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASW 483
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
NT+I GY G+L E AI +F M D ++
Sbjct: 484 NTMILGYGMIGEL-------------------------------ETAISMFEAMRDDTVQ 512
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D ++ ++ LSAC+ G +E+G + ++ T +VD + G++ A ++
Sbjct: 513 YDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKL 572
Query: 301 FES---SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+ + + N+ W A+L ++G L + E + + G IL + + +
Sbjct: 573 IQQLPIAPDANI--WGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNI-YAET 629
Query: 358 GLVDEARKLFDEMES 372
G DEA K+ + M+S
Sbjct: 630 GRWDEANKIRELMKS 644
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
Query: 234 MMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY 293
M+ ++ D+ L C+ ++ +G +H + D ++ L+ Y CG+
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 294 INTAIEIFESSQEKNLFTWNAMLVGLAMHG-LGRLSLVYFSRMIEARIKPDGVTILGALV 352
+N A +F+ E+++ +WN ++ L+++G YF ++ + IKP+ V+++ L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 353 GCSHAGLVDEARKLFDEMESV-YGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD 411
A L DE SV G+ ++ + D G+ G ++ ++ + +
Sbjct: 121 --ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178
Query: 412 VFVWSGLLGGCRIHG 426
V W+ ++ G G
Sbjct: 179 V-SWNSIINGLACKG 192
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 259/514 (50%), Gaps = 50/514 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
I+ + +H+ + + L S + ++ A + K ++SA +F+ IP
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGV--KLMRAYASLKDVASARK-----------VFDEIP 101
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+ N +IR++ V +F M ++ PD Y+FP +L+ACS + + +
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK--- 189
IH K+G +FV N L+ +Y L +A+ + DE+ RDVVS N+L+ GY +
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 190 -------------------AGDLA---------------HARQLFDRMPFRDAVSWGTLV 215
AG +A + + +F +M + VSW ++
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMI 281
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
Y ++ EA++L+ M +PD +++ S L AC L GK IH YIE ++
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L L+D YAKCG + A ++FE+ + +++ +W AM+ G G ++ FS++
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
++ + PD + + L CSHAGL++E R F M Y ++ L+H CM DLLGRAG
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
++EA I+ M M + VW LLG CR+H + +I AA+ + +L PE G Y +L+++
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
YA A RWE+V IR + + +KKN G S +++N
Sbjct: 522 YAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 260/487 (53%), Gaps = 50/487 (10%)
Query: 11 KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNN 70
+++ + Q+H + G+ L+ + TF +A SP D L+YA + +
Sbjct: 4 RSMWEALQVHGQVVKLGMGHKDASRKLSKVF----TF----AALSPFGD-LNYARLLLST 54
Query: 71 IPYPSTFSYNTIIRAHT---LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
P +++ YNT++RA + L + P +A+ LF M + PPD ++FPFLL+ CS+
Sbjct: 55 NPTLNSYYYNTLLRAFSQTPLPTPPFHALSLFLSMPS---PPDNFTFPFLLKCCSRSKLP 111
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGY 187
L + +H+ + KLGF D+++ N L+H+Y F
Sbjct: 112 PLGKQLHALLTKLGFAPDLYIQNVLLHMYSEF---------------------------- 143
Query: 188 VKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALV 247
GDL AR LFDRMP RD VSW +++ G D EAI LF M+ ++ + ++
Sbjct: 144 ---GDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINLFERMLQCGVEVNEATVI 200
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRV--DSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
S L ACA G L G+ +H +E I + S +ST LVD YAK G I +A ++F+
Sbjct: 201 SVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKGGCIASARKVFDDVV 260
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
+++F W AM+ GLA HGL + ++ F M + +KPD T+ L C +AGL+ E
Sbjct: 261 HRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTAVLTACRNAGLIREGFM 320
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
LF +++ YG+ ++H+GC+ DLL RAG ++EA + + MP+ D +W L+ C++H
Sbjct: 321 LFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIEPDTVLWRTLIWACKVH 380
Query: 426 GNVEIAEAAAEH--VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
G+ + AE +H + ++ +D G Y + ++VYA+ +W + ++R ++ + K G
Sbjct: 381 GDADRAERLMKHLEIQDMRADDSGSYILASNVYASTGKWCNKAEVRELMNKKGLVKPPGT 440
Query: 484 SLIQLNG 490
S I+++G
Sbjct: 441 SRIEVDG 447
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 228/409 (55%)
Query: 78 SYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
++NT+I ++ LF +M + + ++F +L ACS L S L + +H+ V
Sbjct: 647 AWNTMISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYV 706
Query: 138 LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHAR 197
LK I + F+ + L+ VYC + +R A+ + E+ ++V S ++I GY G++A AR
Sbjct: 707 LKNRLIANPFICSGLVDVYCKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEAR 766
Query: 198 QLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLG 257
+LFD + +++V W L GY + QCE +L PD + L+S + ACA
Sbjct: 767 KLFDSLDEKNSVVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQA 826
Query: 258 ELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLV 317
L GK IH Y+ I++D+ L++ LVD Y+KCG I A IF +K+ +N M+
Sbjct: 827 ALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIA 886
Query: 318 GLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVS 377
G A HG ++ F M++ KPD +T + L C H GLV+ FD M + Y +
Sbjct: 887 GYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNIC 946
Query: 378 KELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEH 437
E+ HY CM DL GRA +++ALE ++K+P+ D +W L CRI+GN E+A A +
Sbjct: 947 PEIDHYACMIDLYGRANQLDKALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDE 1006
Query: 438 VMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
++ ++ E+G Y LA+VYA WE++ +IR+ + ++KKNAGCS +
Sbjct: 1007 LLVIEGENGSRYVQLANVYAAEGNWEEMGRIRKKMKGKEVKKNAGCSWV 1055
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 36/259 (13%)
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H Q +K GF +F+ N L+ Y L DAQ+LFDE+ R+V S N +I YVK+ +L
Sbjct: 434 HLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNL 493
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE-EAIQLFCNMMDLD--IKPDNIALVSAL 250
AR LFD +D V++ ++++GYA+SD + +A+ F M I+ D L++ L
Sbjct: 494 RQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITML 553
Query: 251 SACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY----------------- 293
+ A+L + GK +H ++ + F ++ L+D Y+KCG+
Sbjct: 554 NLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDS 613
Query: 294 ---------------INTAIEIFESSQEKN-LFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
I+ A+++F E+N + WN M+ G +G SL F RM +
Sbjct: 614 VSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMAD 673
Query: 338 ARIKPDGVTILGALVGCSH 356
++ + T L CS+
Sbjct: 674 EKVGWNEHTFASVLSACSN 692
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 173/404 (42%), Gaps = 77/404 (19%)
Query: 61 LSYALSIFNNIPYPSTFSYNTII----------RAHTLFSSPL----------------- 93
L+ A +F+ +P + FS+N II +A LF S +
Sbjct: 462 LNDAQKLFDEMPERNVFSWNAIIAAYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARS 521
Query: 94 -----NAVVLFSQMRTVS--IPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDV 146
A+ F +M+T I D ++ +L ++LC S + +HS +LK V
Sbjct: 522 DGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTV 581
Query: 147 FVLNSLMHVYCVFHRLRDAQELF---DEILYRDVVSCNTLIDGYVKAGDLAHARQLF-DR 202
F +SL+ +Y ++A ++ E++ D VS N ++ + G++ A LF
Sbjct: 582 FAASSLIDMYSKCGFFKEACRVYYGCGEVV--DSVSRNAMVAACCREGEIDVALDLFWKE 639
Query: 203 MPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQG 262
+ D V+W T+++G+ Q+ EE+++LF M D + + S LSAC+ L L+ G
Sbjct: 640 LEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLG 699
Query: 263 KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
K +H Y+ N++ + F+ +GLVD Y KC + A + + +N+++ +M+VG
Sbjct: 700 KEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAESVNSELRMQNVYSITSMIVGY--- 756
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
S G + EARKLFD ++ V
Sbjct: 757 --------------------------------SSQGNMAEARKLFDSLDEKNSVVWTALF 784
Query: 383 YGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+G + L + + E L +K DV + ++G C I
Sbjct: 785 FGYVK--LQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQA 826
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 254/486 (52%), Gaps = 25/486 (5%)
Query: 9 RCKTIKQIHQIHAHFLTKGL---LFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
R +K+ QIH GL LFL C I LY + L +A
Sbjct: 137 RLGLVKEGMQIHGFLKKTGLWSDLFLQNCLIG---LYLKCGW-------------LGFAR 180
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
IF+ +P + SYN++I + S +A LF M P + + S
Sbjct: 181 QIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLM-----PEEMKNLISWNSMISGYA 235
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S I S++ D+ NS++ Y R+ DA+ LFD + RDVV+ +T+ID
Sbjct: 236 QTSDGVDIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMID 295
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNI 244
GY K G + A+ LFD+MP RD VS+ +++AGY Q+ EA+++F +M + + PD
Sbjct: 296 GYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDET 355
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
LV LSA A+LG L + ++H YI Q + L L+D Y+KCG I A+ +F+
Sbjct: 356 TLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGI 415
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+ K++ WNAM+ GLA+HGLG + ++ IKPD +T +G L CSH+GLV E
Sbjct: 416 ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGL 475
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F+ M + + L+HYGCM D+L R+G IE A +I++MP+ + +W L C
Sbjct: 476 LCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNH 535
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H E E A+H++ + Y +L+++YA+ +W+DV +IR + KI+K GCS
Sbjct: 536 HKEFETGELVAKHLIWEAGYNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCS 595
Query: 485 LIQLNG 490
I+L+G
Sbjct: 596 WIELDG 601
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 227/459 (49%), Gaps = 50/459 (10%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CK + +++IHA +T G F+ ++ T I+ A A+S + +A +F+
Sbjct: 24 CKNSEDVNKIHARLVTNG--FIKNPNLTTRIVLAF--------AASRRPYXVEFARFVFH 73
Query: 70 NIPYPS----------TFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
S + +N +I++H+ + P A++LF M + D +S +L+
Sbjct: 74 EYXIRSFSPGGGDXEDXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLK 133
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
ACS+L IH + K G D+F+ N L+ +Y L A+++FD + RD VS
Sbjct: 134 ACSRLGLVKEGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVS 193
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQ-SDQCEEAIQLFCNMMD 236
N++IDGYVK G AR+LFD MP ++ +SW ++++GYAQ SD + A +LF M D
Sbjct: 194 YNSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPD 253
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
D+ I+ S + + G +E K Y+ R D + ++D YAK G+++
Sbjct: 254 KDL----ISWNSMIDGYVKHGRIEDAK----YLFDVMPRRDVVTWSTMIDGYAKLGFVHQ 305
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCS 355
A +F+ +++ ++N+M+ G + +L FS M E+ + PD T++ L +
Sbjct: 306 AKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIA 365
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYG----CMADLLGRAGLIEEALEMIKKMPMGGD 411
G + +A + +Y V K+ G + D+ + G I+ A+ + K +
Sbjct: 366 QLGRLSKAMDM-----HLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIE-NKS 419
Query: 412 VFVWSGLLGGCRIHGNVEIAEAAAEHVMK-----LKPED 445
+ W+ ++GG IHG + E+A + +++ +KP+D
Sbjct: 420 IDHWNAMIGGLAIHG---LGESAFDMLLQIERRSIKPDD 455
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 258/489 (52%), Gaps = 12/489 (2%)
Query: 2 TLNNFIKRCKTIKQI-HQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
TL +K C ++ H + H + L F+ + +L++ +SA S
Sbjct: 112 TLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSY------ASAGS----- 160
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L + F+ + + S+N++I + + A LF MR + D ++ LL A
Sbjct: 161 LGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFA 220
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS + + +HS +L G D+ + N+L+ +Y L A FD + +++ VS
Sbjct: 221 CSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSW 280
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+++ K + AR F+++P + +SW +++ Y Q + EA+ L+ M L +
Sbjct: 281 TSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLA 340
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD L + LSAC +LG+L GK IH I N L L+D YA+CG ++TAI +
Sbjct: 341 PDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISL 400
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F KN+ +WNA++ LAMHG + +L++F M+ PD +T + L C+H GL+
Sbjct: 401 FSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLL 460
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ + F M VY V ++HY CM DLLGR G + +A+++IK MPM DV VW LLG
Sbjct: 461 EAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLG 520
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHG+++I + + +++L+ GG++ +++++ +WED+ ++R+ + +KKN
Sbjct: 521 ACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKN 580
Query: 481 AGCSLIQLN 489
G S I+ N
Sbjct: 581 MGVSSIETN 589
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 206/460 (44%), Gaps = 77/460 (16%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+ ++RC ++ +++Q+HAH + G+ +T+ S + P +
Sbjct: 15 VRELLRRCGSVHRLNQLHAHLVVHGV-------------DDVTSQILASYCALPAGGGVW 61
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
YA +F+ IP P F YN++IRA+ P A+ L M I P+ ++ PFLL+AC+
Sbjct: 62 YARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACA 121
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
++ + H V+KLGF+ VFV N+L+H Y L D++ FDE++ R+VVS N+
Sbjct: 122 RVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 181
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I+GY +AG+ EA LF M + D
Sbjct: 182 MINGYAQAGN-------------------------------TREACSLFEGMRRQGLLAD 210
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCG---------- 292
LVS L AC+ G LE GK +H ++ + R+D L+ LVD Y KCG
Sbjct: 211 EFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFD 270
Query: 293 ---------------------YINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
I+ A + FE EK++ +WNAM+ G +L
Sbjct: 271 MMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDL 330
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
++RM + PD T+ L C G + + + D + + + + + + D+
Sbjct: 331 YNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFNSLLDMYA 389
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
R G ++ A+ + +MP +V W+ ++G +HG + A
Sbjct: 390 RCGQVDTAISLFSEMP-SKNVISWNAIIGALAMHGRAQDA 428
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 245/432 (56%), Gaps = 8/432 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L YA +F+ +P + SYN++I + +A LF M + S+ F++
Sbjct: 172 LGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEK--KNLISWNFMISG 229
Query: 121 CSQLCSH-SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVS 179
+Q ++A+ + ++ + D+ NSL+ Y R+ DA+ LF+++ RDVV+
Sbjct: 230 YAQRADGVNVAKKLFDEMPEK----DLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVT 285
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLD 238
T++DGY K G + A+ LFDRMP RD V++ +++ GY Q+ +EAI +F +M +
Sbjct: 286 WATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESH 345
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ PD LV LSA A+LG L + +IH YI N+ R+ L L+D Y+KCG I ++
Sbjct: 346 LSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSM 405
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE + K++ WNAM+ GLA+HGLG + ++ + IKPD +T +G L CSH+G
Sbjct: 406 RVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSG 465
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
LV E F+ M + + +L+HYGCM D+L R+G IE A +I++MP+ + +W
Sbjct: 466 LVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTF 525
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C H E E A+H+ + + +L+++YA+ W++V ++R ++ K++
Sbjct: 526 LTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLR 585
Query: 479 KNAGCSLIQLNG 490
K GCS I+L+G
Sbjct: 586 KIPGCSWIELDG 597
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 225/455 (49%), Gaps = 46/455 (10%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CK + +++IHA +T G F+ ++ T I+ + A S + +A +F+
Sbjct: 24 CKNSEDVNKIHARLITNG--FIKNPNLTTRIV--------LDFADSRRSYLAEFARFVFH 73
Query: 70 ------NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
N + F +N +I++H+ P A++LF M + D +S +L+ACS+
Sbjct: 74 EYHVCSNGDFEDPFLWNAVIKSHSHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKACSR 133
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L IH + K G D+++ N L+ +Y L A+++FD + RD VS N++
Sbjct: 134 LGFVKEGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSM 193
Query: 184 IDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQ-SDQCEEAIQLFCNMMDLDIK 240
IDGYVK G + AR LFD MP ++ +SW +++GYAQ +D A +LF M + D+
Sbjct: 194 IDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDL- 252
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
I+ S + + G +E K++ + + D +VD YAK G+++ A +
Sbjct: 253 ---ISWNSLIDGYVKHGRMEDAKSLFNKMP----KRDVVTWATMVDGYAKLGFVHQAKSL 305
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGL 359
F+ +++ +N+M+ G + + ++ F+ M E+ + PD T++ L + G
Sbjct: 306 FDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGR 365
Query: 360 VDEARKLFDEMESVYGVSKELKHYG----CMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+ +A + +Y + + + G + D + G I++++ + +++ + W
Sbjct: 366 LSKAVDI-----HLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIE-NKSIDHW 419
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMK-----LKPED 445
+ ++GG IHG + E+A + +++ +KP+D
Sbjct: 420 NAMIGGLAIHG---LGESAFDMLLQIEKRSIKPDD 451
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/563 (30%), Positives = 285/563 (50%), Gaps = 89/563 (15%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
TL + K+ +T++Q QI + +T GL + T L + P S +
Sbjct: 10 TLVSLFKKHQTLEQCKQIQSIIVTSGLYSTQDNN--TLFLTKLLQCVPFSQNQN------ 61
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
+ L +F+ I P+T N +I A S P +++ ++++R + PD ++FP LL+
Sbjct: 62 TCLLLLFDTINTPNTRLLNKMIAA---CSHPHISLLCYAKLRQKGVQPDKHTFPLLLKTF 118
Query: 122 SQLCSHSLAQT---IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
S+ S+AQ I++Q+ KLGF D+F+ N+L+ + + A+++FDE ++D V
Sbjct: 119 SK----SIAQNPFMIYAQIFKLGFDLDLFIGNALIPAFANSGFVESARQVFDESPFQDTV 174
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFR----DAVSWGTLV------------------- 215
+ LI+GYVK A + F +M R DAV+ +++
Sbjct: 175 AWTALINGYVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFY 234
Query: 216 --AGYAQSD---------------QCEEAIQLF--------------------------- 231
AG Q D CE+A ++F
Sbjct: 235 VEAGRVQLDGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDA 294
Query: 232 ----CNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+M+ ++ P++ L S LSACA++G L+QG+ +H+YIE N+I ++ L T LVD
Sbjct: 295 LRAFWDMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYIECNKINMNVTLGTALVDM 354
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
YAKCG I+ A+ +FE+ KN++TW ++ GLA+HG +L F M+++ I+P+ VT
Sbjct: 355 YAKCGSIDEALRVFENMPVKNVYTWTVIINGLAVHGDALGALNIFCCMLKSGIQPNEVTF 414
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
+G L CSH G V+E ++LF+ M+ Y + E+ HYGCM D+LGRAG +E+A ++I MP
Sbjct: 415 VGVLAACSHGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRAGYLEDAKQIIDNMP 474
Query: 408 MGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
M V L G C +H E+ E ++ +P G Y +LA++Y WE +
Sbjct: 475 MKPSPGVLGALFGACLVHKAFEMGEHIGNLLVNQQPNHSGSYALLANLYKMCQNWEAAAQ 534
Query: 468 IRRSLDAGKIKKNAGCSLIQLNG 490
+R+ + ++ K G S I+++G
Sbjct: 535 VRKLMKGLRVVKAPGYSRIEVDG 557
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 248/452 (54%), Gaps = 31/452 (6%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++F +P + S+NT++ A+T +A LF M D S+ LL A +
Sbjct: 117 AEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPV----RDAGSWNILLAALVR 172
Query: 124 LCSHSLAQTIHSQVLKLGFIC---------------------------DVFVLNSLMHVY 156
+ A+ + ++ + + +V N+++ Y
Sbjct: 173 SGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGY 232
Query: 157 CVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
HR+ +A +LF ++ RD+ S N +I G+++ DL A+ LFD+MP R+ ++W T++
Sbjct: 233 ARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMN 292
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
GY QS Q E A+Q+F M+ I+P+ + + A+ AC+ L L +G+ +H+ I +
Sbjct: 293 GYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQF 352
Query: 277 DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
D+F+ + L++ YAKCG I A ++F+ S+EK++ +WN M+ A HG+G ++ + +M
Sbjct: 353 DTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQ 412
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
E KP+ VT +G L CSH+GLVDE ++F+ M ++ +HY C+ DL RAG +
Sbjct: 413 EKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRL 472
Query: 397 EEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVY 456
+A +I + + VW+ LLGGC HGN I + AA ++++ +P + G Y +L ++Y
Sbjct: 473 GDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIY 532
Query: 457 ANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
A+A +W++ KIR ++ +KK GCS I++
Sbjct: 533 ASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEV 564
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 138/321 (42%), Gaps = 35/321 (10%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ +P + ++ T++ + A+ +F+ M I P+ +F + A
Sbjct: 269 LERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDA 328
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L S Q +H + K F D F+ ++LM++Y +R A+++FD +DV+S
Sbjct: 329 CSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISW 388
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N +I A YA EAI L+ M + K
Sbjct: 389 NGMI-------------------------------AAYAHHGVGVEAIHLYEKMQEKGYK 417
Query: 241 PDNIALVSALSACARLGELEQGKNIHRY-IELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
P+++ V LSAC+ G +++G I Y ++ I V T L+D ++ G + A
Sbjct: 418 PNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKR 477
Query: 300 IFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+ + E + WNA+L G HG + + ++EA G L + S AG
Sbjct: 478 LIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYAS-AG 536
Query: 359 LVDEARKLFDEMESVYGVSKE 379
EA K+ EM G+ K+
Sbjct: 537 KWKEAAKIRSEMND-RGLKKQ 556
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 141/311 (45%), Gaps = 37/311 (11%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMP 204
+V +L+ Y R+ +A+ LF + R+VVS NT+++ Y AG + A LFD MP
Sbjct: 97 NVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMP 156
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
RDA SW L+A +S ++A +LF M + ++ +A + ++ AR G +++ +
Sbjct: 157 VRDAGSWNILLAALVRSGNMDKARKLFDRMPERNV----MAWTTMVAGIARSGSVDEARA 212
Query: 265 I------HRYIELNQI--------RVDS----FLSTGLVDFYAK----CGYINT-----A 297
+ + N + R+D F+ D + G+I A
Sbjct: 213 LFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERA 272
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++F+ +N+ TW M+ G +L F+ M+ I+P+ VT LGA+ CS+
Sbjct: 273 QDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNL 332
Query: 358 GLVDEARKLFDEMESVYGVSKELKHY--GCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
+ E +++ + + S + + + +L + G I A ++ + DV W
Sbjct: 333 AGLSEGQQVH---QMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVF-DLSKEKDVISW 388
Query: 416 SGLLGGCRIHG 426
+G++ HG
Sbjct: 389 NGMIAAYAHHG 399
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 109/242 (45%), Gaps = 19/242 (7%)
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N + AG ++ AR+LFDR P RD VSW LVA YA+ +A LF D +
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR---PDAR 95
Query: 241 PDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
+ + + LS AR G +++ + + R E N + ++ L Y G + A
Sbjct: 96 RNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEA-----YTSAGRVRDAWT 150
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ ++ +WN +L L G + F RM E + + + G + +G
Sbjct: 151 LFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNV----MAWTTMVAGIARSGS 206
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDEAR LFD M VS + M R I+EA ++ KMP D+ W+ ++
Sbjct: 207 VDEARALFDGMPERNVVS-----WNAMISGYARNHRIDEAHDLFMKMPT-RDIASWNIMI 260
Query: 420 GG 421
G
Sbjct: 261 TG 262
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 19/262 (7%)
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRM-PFRDAVSWGTLVAGYA 219
R+ DA+ LFD RDVVS L+ Y + G L AR LFDR R+ V+W L++GYA
Sbjct: 50 RVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYA 109
Query: 220 QSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSF 279
++ + +EA LF M + ++ N L + SA G + + + + +
Sbjct: 110 RAGRVDEAEALFQRMPERNVVSWNTMLEAYTSA----GRVRDAWTLFDGMPVRDAGSWNI 165
Query: 280 LSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR 339
L LV + G ++ A ++F+ E+N+ W M+ G+A G + F M E
Sbjct: 166 LLAALV----RSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERN 221
Query: 340 IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEA 399
+ V+ + G + +DEA LF +M ++++ + M + +E A
Sbjct: 222 V----VSWNAMISGYARNHRIDEAHDLFMKMP-----TRDIASWNIMITGFIQDRDLERA 272
Query: 400 LEMIKKMPMGGDVFVWSGLLGG 421
++ KMP +V W+ ++ G
Sbjct: 273 QDLFDKMPR-RNVITWTTMMNG 293
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 15/228 (6%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVSCNTLIDGYVKAGDLAHARQLFDRM 203
DV +L+ Y L DA+ LFD R+VV+ L+ GY +AG + A LF RM
Sbjct: 65 DVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRM 124
Query: 204 PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGK 263
P R+ VSW T++ Y + + +A LF M D NI L+A R G +++ +
Sbjct: 125 PERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNI----LLAALVRSGNMDKAR 180
Query: 264 NI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
+ R E N + T +V A+ G ++ A +F+ E+N+ +WNAM+ G A +
Sbjct: 181 KLFDRMPERNVM-----AWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARN 235
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM 370
+ F +M I + I G + ++ A+ LFD+M
Sbjct: 236 HRIDEAHDLFMKMPTRDIASWNIMITGFIQDRD----LERAQDLFDKM 279
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDG---- 344
A G ++ A +F+ + ++++ +W A++ A G+ + F R PD
Sbjct: 46 AAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR-------PDARRNV 98
Query: 345 VTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
VT L G + AG VDEA LF M VS + M + AG + +A +
Sbjct: 99 VTWTALLSGYARAGRVDEAEALFQRMPERNVVS-----WNTMLEAYTSAGRVRDAWTLFD 153
Query: 405 KMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
MP+ D W+ LL GN++ A
Sbjct: 154 GMPV-RDAGSWNILLAALVRSGNMDKAR 180
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/427 (37%), Positives = 235/427 (55%), Gaps = 37/427 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P S+ II T A+ FS+M + P+ ++ +L + +
Sbjct: 160 ACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGR 216
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ SL + IH +LK SL+ + + N L
Sbjct: 217 VGCLSLGKGIHGLILKRA---------SLI----------------------SLETGNAL 245
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPD 242
ID YVK L+ A ++F + +D VSW ++++G ++ +EAI LF M IKPD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
L S LSACA LG ++ G+ +H YI I+ D+ + T +VD YAKCGYI TA+EIF
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ KN+FTWNA+L GLA+HG G SL YF M++ KP+ VT L AL C H GLVDE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 363 ARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R+ F +M+S Y + +L+HYGCM DLL RAGL++EALE++K MP+ DV + +L
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 422 CRIHGNV-EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C+ G + E+ + + + ++ ED GVY +L++++A RW+DV +IRR + I K
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 481 AGCSLIQ 487
G S I+
Sbjct: 546 PGSSYIE 552
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 195/427 (45%), Gaps = 50/427 (11%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L I RC +++ QI +T+ LL I+ + TF S+ D S
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDD------LIINKVVTFLGKSA------DFAS 56
Query: 63 YALSIFNNI-PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
Y+ I ++I S+FSYNT++ ++ + P + + + PD ++FP + +AC
Sbjct: 57 YSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKAC 116
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + IH V K+GF D++V NSL+H Y V
Sbjct: 117 GKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGV----------------------- 153
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
G+ +A ++F MP RD VSW ++ G+ ++ +EA+ F M D++P
Sbjct: 154 --------CGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEP 202
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ V L + R+G L GK IH I + L+D Y KC ++ A+ +F
Sbjct: 203 NLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVF 262
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLV 360
++K+ +WN+M+ GL + ++ FS M + IKPDG + L C+ G V
Sbjct: 263 GELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAV 322
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D R + + + + G+ + + D+ + G IE ALE+ + +VF W+ LLG
Sbjct: 323 DHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGI-RSKNVFTWNALLG 380
Query: 421 GCRIHGN 427
G IHG+
Sbjct: 381 GLAIHGH 387
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFL 117
+ LS A+ +F + S+N++I A+ LFS M+T S I PD + +
Sbjct: 253 EQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSV 312
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L AC+ L + + +H +L G D + +++ +Y + A E+F+ I ++V
Sbjct: 313 LSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 372
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+W L+ G A E+++ F M+ L
Sbjct: 373 -------------------------------FTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYIN 295
KP+ + ++AL+AC G +++G+ ++ + + L ++D + G ++
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLD 461
Query: 296 TAIEIFES 303
A+E+ ++
Sbjct: 462 EALELVKA 469
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 229/430 (53%), Gaps = 32/430 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A+ +F + S S+ ++I + +V LF +M I PD ++ +L A
Sbjct: 302 LNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHA 361
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ + +H+ + + D+FV N+LM
Sbjct: 362 CACTGLLENGKDVHNYIKENKMQSDLFVSNALM--------------------------- 394
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
D Y K G + A +F M +D VSW T++ GY+++ EA+ LF M + K
Sbjct: 395 ----DMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSK 449
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P++I + L ACA L LE+G+ IH +I N +D ++ LVD Y KCG + A +
Sbjct: 450 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLL 509
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ EK+L +W M+ G MHG G ++ F+ M + I+PD V+ + L CSH+GL+
Sbjct: 510 FDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL 569
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE F+ M + + + +HY C+ DLL RAG + +A + IK MP+ D +W LL
Sbjct: 570 DEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLC 629
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
GCRI+ +V++AE AEHV +L+PE+ G Y +LA++YA A++WE+V K+R + ++KN
Sbjct: 630 GCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKN 689
Query: 481 AGCSLIQLNG 490
GCS I++ G
Sbjct: 690 PGCSWIEIKG 699
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 167/341 (48%), Gaps = 32/341 (9%)
Query: 106 SIPPDF--YSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLR 163
S PD ++ +L+ C+ L S + IHS + D + + L+ +Y LR
Sbjct: 94 SPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLR 153
Query: 164 DAQELFDEILYRDVVSCNTLIDGYVKAGD------------------LAHARQLFDRMPF 205
+ + +FD++ V N L++GY K G+ + AR+LFD +
Sbjct: 154 EGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGD 213
Query: 206 RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI 265
RD +SW ++++GY + E+ + LF M+ L I D +VS ++ C+ G L G+ +
Sbjct: 214 RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRAL 273
Query: 266 HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLG 325
H Y + L+ L+D Y+K G +N+AI++FE+ E+++ +W +M+ G A GL
Sbjct: 274 HGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLS 333
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF-----DEMESVYGVSKEL 380
+S+ F M + I PD TI L C+ GL++ + + ++M+S VS L
Sbjct: 334 DMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNAL 393
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
D+ + G + +A + +M + D+ W+ ++GG
Sbjct: 394 ------MDMYAKCGSMGDAHSVFSEMQV-KDIVSWNTMIGG 427
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 166/363 (45%), Gaps = 34/363 (9%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + S+N++I + + LF QM + I D + ++ CS
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + +H +K F +++ N L
Sbjct: 264 TGMLLLGRALHGYAIKASF-------------------------------GKELTLNNCL 292
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K+G+L A Q+F+ M R VSW +++AGYA+ + +++LF M I PD
Sbjct: 293 LDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDI 352
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ + L ACA G LE GK++H YI+ N+++ D F+S L+D YAKCG + A +F
Sbjct: 353 FTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSE 412
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
Q K++ +WN M+ G + + L +L F M + KP+ +T+ L C+ ++
Sbjct: 413 MQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERG 471
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+++ + G S + + D+ + G + A + +P D+ W+ ++ G
Sbjct: 472 QEIHGHILR-NGFSLDRHVANALVDMYLKCGALGLARLLFDMIPE-KDLVSWTVMIAGYG 529
Query: 424 IHG 426
+HG
Sbjct: 530 MHG 532
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 26/225 (11%)
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L CA L ++ G+ IH I+ N + VD L + LV Y CG + IF+ +
Sbjct: 106 SVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANE 165
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+F WN ++ G A G R SL F RM E I+ V+ ARKLF
Sbjct: 166 KVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRR-----------------VESARKLF 208
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCRI 424
DE+ +++ + M GL E+ L++ ++M + G D+ ++ GC
Sbjct: 209 DELG-----DRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 425 HGNVEIAEAAAEHVMKLK-PEDGGVYKVLADVYANADRWEDVVKI 468
G + + A + +K ++ + L D+Y+ + +++
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQV 308
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 243/431 (56%), Gaps = 3/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ +A +F+ +P +N ++R + AV L +M PD + + A
Sbjct: 97 VDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVALAEEMERSGATPDRVTLVTAVTA 156
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS+ SL + I + + + F + V N+L+ +Y L +A ++F ++ R+++S
Sbjct: 157 CSRAGDLSLGRRIRAYMDGV-FGFSLPVANALLDMYTKNGYLEEAVKMFQQMPERNIISW 215
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
L+ GY AG L AR LF + +D + W ++ Q EEA+ LF +M ++
Sbjct: 216 TILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVE 275
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +V+ L+ CA +G L+QG+ IH+Y E +++D+ L T L++ Y+KCG+++ +++I
Sbjct: 276 PDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMYSKCGHVDKSLQI 335
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F Q ++ W A++ GLA +G +L F M ++ KPDG+T +G L C H GLV
Sbjct: 336 FGRMQGRDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLNACCHGGLV 395
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF-VWSGLL 419
DE R+ F M+ +Y + ++HY C+ +LLG AGL+ EA ++I+ MP+ D ++ LL
Sbjct: 396 DEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLLYEAEKLIRDMPVNNDTMPLFGALL 455
Query: 420 GGCRIHGNVEIAEAAAEHVMKLK-PEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
C+ +GNVE++E + + K ++ V ++++VYA A RWE+ +++R + +K
Sbjct: 456 TACKAYGNVEMSERLTKRIAKEDCSQNPDVNVLMSNVYATASRWEESIRVRSKMTHPAVK 515
Query: 479 KNAGCSLIQLN 489
K AGCS+I++
Sbjct: 516 KTAGCSMIEVK 526
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 171/407 (42%), Gaps = 79/407 (19%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLK 139
N +IR S + ++ +R + D Y++PF+LRA + + +H+ +K
Sbjct: 15 NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAAVK 74
Query: 140 LGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQL 199
GF D + +SL+ +Y + G + AR++
Sbjct: 75 TGFRWDAYTASSLLEMYTML-------------------------------GRVDFARKV 103
Query: 200 FDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGEL 259
FD MP R V W ++ Y + + A+ L M PD + LV+A++AC+R G+L
Sbjct: 104 FDEMPQRFLVLWNMMMRCYIRCGRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGDL 163
Query: 260 EQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGL 319
G+ I Y++ ++ L+D Y K GY+ A+++F+ E+N+ +W ++ G
Sbjct: 164 SLGRRIRAYMD-GVFGFSLPVANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVSGY 222
Query: 320 AM-------------------------------HGLGRLSLVYFSRMIEARIKPDGVTIL 348
A+ HG +L F M R++PD T++
Sbjct: 223 AVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVV 282
Query: 349 GALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
L C++ G +D+ + ++++V G + + ++ + G ++++L+
Sbjct: 283 TLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTA--------LIEMYSKCGHVDKSLQ 334
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGV 448
+ +M G D W+ ++ G +G A E + + K + G+
Sbjct: 335 IFGRM-QGRDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGI 380
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 243/434 (55%), Gaps = 6/434 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
+ A++ F + ++N++I L A+ +FS+M R + PD ++ +L
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD--V 177
AC+ L + + IHS ++ GF VLN+L+ +Y + A+ L ++ +D +
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
L+DGY+K GD+ A+ +F + RD V+W ++ GY Q EAI LF +M+
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+P++ L + LS + L L GK IH ++ +I S +S L+ YAK G I +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS-VSNALITMYAKAGNITS 466
Query: 297 AIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A F+ + E++ +W +M++ LA HG +L F M+ ++PD +T +G C+
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAGLV++ R+ FD M+ V + L HY CM DL GRAGL++EA E I+KMP+ DV W
Sbjct: 527 HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL CR+H N+++ + AAE ++ L+PE+ G Y LA++Y+ +WE+ KIR+S+ G
Sbjct: 587 GSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDG 646
Query: 476 KIKKNAGCSLIQLN 489
++KK G S I++
Sbjct: 647 RVKKEQGFSWIEVK 660
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 175/396 (44%), Gaps = 83/396 (20%)
Query: 109 PDFYSFPFLLRACSQLCSHSL--------AQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
P S LL C+ L S+ AQ +H +V+K G + V+++N+LM+VY
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
A++LFDE+ R S NT++ Y K GD+ + FD++P RD+VSW T++ GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
Q +AI++ +M+ I+P L + L++ A +E GK +H +I +R + +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 281 STGLVDFYAKC-------------------------------GYINTAIEIFESSQEKNL 309
S L++ YAKC G ++ A+ FE E+++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGC-------------- 354
TWN+M+ G G +L FS+M+ ++ + PD T+ L C
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 355 ---------------------SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG-- 391
S G V+ AR+L ++ +K+LK G A L G
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG-----TKDLKIEGFTALLDGYI 358
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ G + +A + + DV W+ ++ G HG+
Sbjct: 359 KLGDMNQAKNIFVSLK-DRDVVAWTAMIVGYEQHGS 393
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 192/449 (42%), Gaps = 77/449 (17%)
Query: 46 TFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV 105
++ + SA S D + F+ +P + S+ T+I + A+ + M
Sbjct: 82 SWNTVLSAYSKRGD-MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
I P ++ +L + + + +HS ++KLG +V V NSL+++Y A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE 225
+ +FD ++ RD+ S N +I +++ G + A F++M RD V+W ++++G+ Q
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 226 EAIQLFCNMM-DLDIKPDNIALVSALSACARLGELEQGKNIHRYI-----ELNQIRVDSF 279
A+ +F M+ D + PD L S LSACA L +L GK IH +I +++ I +++
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 280 LS----------------------------TGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
+S T L+D Y K G +N A IF S +++++
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD---------------------------- 343
W AM+VG HG ++ F M+ +P+
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 344 ------GVTILGALVGC-SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
V++ AL+ + AG + A + FD + ++ + M L + G
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR----CERDTVSWTSMIIALAQHGHA 496
Query: 397 EEALEMIKKMPMGG---DVFVWSGLLGGC 422
EEALE+ + M M G D + G+ C
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSAC 525
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 225/390 (57%), Gaps = 3/390 (0%)
Query: 102 MRTVSIPPDFYSFPFLLRACSQLCS--HSLAQTIHSQVLKLGF-ICDVFVLNSLMHVYCV 158
MR + I P+ +F LL C+ L S +SL +H+ KLG C++ V +L+ +Y
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
+ ++ FDE+ ++ S NT+IDG+V+ G + A ++FD MP R +SW L+ G+
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
+ EEA++ F M ++PD + +V+ LSACA LG L G +HRY +R +
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNV 180
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
+ L+D Y++CG I A ++FE E+ L +WN+++ GLA +G +L +F M +
Sbjct: 181 KICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQ 240
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEE 398
KP+ V+ GAL CSH GLVDE K FD ME V+ +S ++HYGC+ DL RAG +E+
Sbjct: 241 GFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLED 300
Query: 399 ALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYAN 458
A+ +++ MPM + V LL CR G+VE+AE +++ L P Y +L+++YA
Sbjct: 301 AMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAA 360
Query: 459 ADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
RW+ K R ++ A I+K G S I++
Sbjct: 361 VGRWDGACKQRMTMKALGIQKKPGFSSIEI 390
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 36/243 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ +F+ +P S+ +I A+ F +M+ + PD + +L AC+
Sbjct: 98 AIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACAN 157
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + L +H LK G +V + NSL+ +Y + A+++F+++ R +VS N++
Sbjct: 158 LGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSI 217
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G A + EEA++ F M KP++
Sbjct: 218 I-------------------------------GGLAANGFTEEALEHFDLMQKQGFKPND 246
Query: 244 IALVSALSACARLGELEQGKNIHRYIE-LNQI--RVDSFLSTGLVDFYAKCGYINTAIEI 300
++ AL+AC+ G +++G +E +++I R++ + +VD Y++ G + A+ +
Sbjct: 247 VSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHY--GCIVDLYSRAGRLEDAMSV 304
Query: 301 FES 303
++
Sbjct: 305 VQN 307
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 235/426 (55%), Gaps = 26/426 (6%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + + ++N++I + A+ +F +M + PD + ++ AC+
Sbjct: 201 AEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACAS 260
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVL-NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
LC+ IH++V+K D VL N+L+ +Y ++ +A+ +FD + R+VVS +
Sbjct: 261 LCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETS 320
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
++ GY +A + AR +F +M R+ VSW L+AGY Q+ + EEA++LF + I P
Sbjct: 321 MVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPT 380
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
+ Y N ++ D F+ L+D Y KCG I +FE
Sbjct: 381 H------------------------YTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFE 416
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+E++ +WNA++VG A +G G +L F +M+ KPD VT++G L CSHAGLV+E
Sbjct: 417 KMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEE 476
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
R F ME +G+ HY CM DLLGRAG + EA +I+ MP+ D VW LL C
Sbjct: 477 GRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAAC 535
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
++HGN+E+ + AAE ++++ P + G Y +L+++YA RW DVV++R+ + + K G
Sbjct: 536 KVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPG 595
Query: 483 CSLIQL 488
CS I++
Sbjct: 596 CSWIEV 601
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 175/359 (48%), Gaps = 42/359 (11%)
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
P+ F LL +C + S + +H+++L F ++F+ N L+ VY L DA++L
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
FD + R+ + N+LI K+G L A +LF MP D SW ++V+G+AQ D+ EE++
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
+ F M D + + SALSACA L +L G +H + ++ D ++ + L+D Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
+KCG + A E+F E+NL TWN+++ +G +L F RM+++ ++PD VT+
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252
Query: 349 GALVGCS-----------HAGL-------------------------VDEARKLFDEMES 372
+ C+ HA + V+EAR++FD M S
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM-S 311
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ V E M RA ++ A M KM +V W+ L+ G +G E A
Sbjct: 312 IRNVVSETS----MVSGYARAASVKAARFMFSKMTQ-RNVVSWNALIAGYTQNGENEEA 365
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 57/377 (15%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F ++P P S+N+++ ++ F +M + YSF L A
Sbjct: 97 LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSA 156
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L ++ +H+ V K + DV++ ++L+ +Y + A+E+F ++ R++V+
Sbjct: 157 CAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTW 216
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI Y + G + EA+++F MMD ++
Sbjct: 217 NSLITCYEQNGPAS-------------------------------EALEVFVRMMDSGLE 245
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + L S +SACA L L++G IH R ++ N+ R D L LVD YAKC +N A
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+ +N+ + +M+ G A + + FS+M + + V+ + G + G
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV----VSWNALIAGYTQNGE 361
Query: 360 VDEARKLFD--EMESVYGVSKELKHY-------------GCMADLLGRAGLIEEALEMIK 404
+EA +LF + ES++ HY + D+ + G IE+ + +
Sbjct: 362 NEEALRLFRLLKRESIWPT-----HYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFE 416
Query: 405 KMPMGGDVFVWSGLLGG 421
KM D W+ ++ G
Sbjct: 417 KMK-ERDCVSWNAIIVG 432
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 258/503 (51%), Gaps = 79/503 (15%)
Query: 61 LSYALSIFNNIPYPSTFS---YNTIIRAHTLFSSPLNAVV-LFSQMRTVSIPPDFYSFPF 116
+ Y+ IF+ + + S+ +N +IR + F+ P + +F +M + P +++P+
Sbjct: 1 MDYSNLIFSQMGHDSSAEIVIWNAMIRGYA-FNGPFQECIRMFDEMPQRGLKPHNFTYPY 59
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY-------------------- 156
++ +C +L + + +H +++K GF V NSL ++Y
Sbjct: 60 VINSCCELEWYGRGKRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYA 119
Query: 157 -------CV---------------FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
CV ++ A+ELFD + RD+VS N++I GY K G +A
Sbjct: 120 RKIFDDMCVRPVELWNQMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVA 179
Query: 195 HARQLFDRMPFRDAVSWGTLVAGYAQSDQCE----------------------------- 225
+AR LF++MP ++ +SW +++ YA +D E
Sbjct: 180 NARGLFEKMPEKNVISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGK 239
Query: 226 --EAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG 283
E++ LF M + PD VS LSAC+ LG+LE GK IH Y+ + + + + T
Sbjct: 240 FVESLNLFVQMQSEGVTPDGYTFVSVLSACSNLGDLEFGKYIH-YLSGDLSQSEVMVGTA 298
Query: 284 LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
L + YA+CG ++ A +F ++++F WN ++ LA+HG ++ F M + +KP+
Sbjct: 299 LTEMYAQCGDVDKAFAVFIKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPN 358
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI 403
T AL CSH GLV+E +F+ ME Y + ++ HYGC+ D+L R G +EEA+ ++
Sbjct: 359 DFTFTSALFACSHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLV 418
Query: 404 KKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWE 463
+ MP DV +W LLGGCR+ G++++AE E +++ + GVY +L++++A+A +W
Sbjct: 419 EDMPFQPDVAIWGALLGGCRVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQWI 478
Query: 464 DVVKIRRSLDAGKIKKNAGCSLI 486
+ R+ +D KI K G S++
Sbjct: 479 EAADARKKMDEKKISKKTGSSVV 501
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 36/316 (11%)
Query: 58 TDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
TD L A S F +P + S+N++I ++ + ++ LF QM++ + PD Y+F +
Sbjct: 206 TDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVTPDGYTFVSV 265
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L ACS L + IH L ++ +V
Sbjct: 266 LSACSNLGDLEFGKYIHY--------------------------------LSGDLSQSEV 293
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+ L + Y + GD+ A +F ++ RD W ++ A + EEAI++F M
Sbjct: 294 MVGTALTEMYAQCGDVDKAFAVFIKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMRKT 353
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINT 296
+KP++ SAL AC+ G +E+G I +E + + G L+D + G +
Sbjct: 354 GLKPNDFTFTSALFACSHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEE 413
Query: 297 AIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+ + E + ++ W A+L G + G +L+ + E GV +L + + S
Sbjct: 414 AMLLVEDMPFQPDVAIWGALLGGCRVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHAS 473
Query: 356 HAGLVD--EARKLFDE 369
++ +ARK DE
Sbjct: 474 AGQWIEAADARKKMDE 489
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 243/432 (56%), Gaps = 34/432 (7%)
Query: 61 LSYALSIFNNIPYP--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L A ++F +P P + S+ I+ A+ P+ A+ +FSQMR + + PD + +L
Sbjct: 170 LGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVL 229
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A + L ++IH+ V+K+G + +L +
Sbjct: 230 NAFTCLQDLEQGRSIHASVMKMGLETEPDLL----------------------------I 261
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S NT+ Y K G +A A+ LFD+M + + W +++GYA++ ++AI LF M++ D
Sbjct: 262 SLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKD 318
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD I++ SA+SACA++G LEQ + + Y+ + R D F+S+ L+D +AKCG + A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECAR 378
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ + ++++ W+AM+VG +HG R ++ + M + P+ VT LG L+ C+H+G
Sbjct: 379 SVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSG 438
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V E F+ M + ++ + +HY C+ DLLGRAG +++A E+IK MP+ V VW L
Sbjct: 439 MVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+ H +VE+ + AA+ + + P + G Y L+++YA A W+ V ++R + +
Sbjct: 498 LSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 479 KNAGCSLIQLNG 490
K+ GCS +++ G
Sbjct: 558 KDVGCSWVEVRG 569
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 216/419 (51%), Gaps = 48/419 (11%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
Q+ QIHA L GL F ++T +++A +++ I+ +A +F+++P P
Sbjct: 36 QLRQIHARLLVLGLQFSG--FLITKLIHASSSYGDIT-----------FARQVFDDLPRP 82
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
F +N IIR ++ + +A++++S+M+ + PD ++FP LL+AC L + + +H
Sbjct: 83 QVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVH 142
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+QV +LGF DVFV N L+ +Y RL C
Sbjct: 143 AQVFRLGFEADVFVQNGLIALYAKCRRL----------------GC-------------- 172
Query: 195 HARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
AR +F+ +P R VSW +V+ YAQ+ + EA+++F M +D+KPD +ALVS L+A
Sbjct: 173 -ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNA 231
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
L +LEQG++IH + + + L L YAKCG + TA +F+ + NL W
Sbjct: 232 FTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMES 372
NAM+ G A +G + ++ F MI ++PD ++I A+ C+ G +++AR + DE S
Sbjct: 292 NAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWM-DEYVS 350
Query: 373 VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
++ + D+ + G +E A + + + DV VWS ++ G +HG A
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVECARSVFDRT-LDRDVVVWSAMIVGYGLHGQAREA 408
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 238/421 (56%), Gaps = 7/421 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A F+ +P S+N ++ + + V LF M + PD ++ +L +
Sbjct: 214 LETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSS 273
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEI-LYRDVVS 179
CS L LA++I ++ ++ F + FV +L+ ++ L AQ++F+++ +Y++ V+
Sbjct: 274 CSSLGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVT 333
Query: 180 CNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD-LD 238
N +I Y + GDL+ AR LF++MP R+ VSW +++AGYAQ+ + +AIQLF M+ D
Sbjct: 334 WNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKD 393
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
KPD + +VS SAC LG L G + N I++ L+ Y +CG + A
Sbjct: 394 SKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDAR 453
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
F+ K+L ++N ++ GLA HG G S+ S+M E I PD +T +G L CSHAG
Sbjct: 454 ITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAG 513
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L++E K+F+ ++ ++ HY CM D+LGR G +EEA+++I+ MPM ++ L
Sbjct: 514 LLEEGWKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHAGIYGSL 568
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L IH VE+ E AA + K++P + G Y +L+++YA A RW+DV K+R + +K
Sbjct: 569 LNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVK 628
Query: 479 K 479
K
Sbjct: 629 K 629
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 213/519 (41%), Gaps = 119/519 (22%)
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVV-LFSQMRTVS-IPPDFYSFPFL 117
P +Y IF YP+ + +++ ++ + VV LF M+ + I P +P L
Sbjct: 51 PSNYTSHIFRAATYPNVHVFTCMLKYYSQIGATTQVVVSLFKHMQYYNDIKPYTSFYPVL 110
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
+++ + +H+ +LKLG D V N++M +Y + + A++LFDE+ R
Sbjct: 111 IKSAGKA-----GMLLHAYLLKLGHSHDHHVRNAIMGIYAKYGCIELARKLFDEMPDRTA 165
Query: 178 VSCNTLIDGYVKAGD---------------------------------LAHARQLFDRMP 204
N +I GY K G+ L AR FD MP
Sbjct: 166 ADWNVIISGYWKCGNEKEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMP 225
Query: 205 FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKN 264
R SW +++GYAQS +E ++LF +M+ +PD V+ LS+C+ LG+ ++
Sbjct: 226 ERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAES 285
Query: 265 IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES--------------------- 303
I R ++ R + F+ T L+D +AKCG + A +IFE
Sbjct: 286 IVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVG 345
Query: 304 -----------SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGAL 351
E+N +WN+M+ G A +G ++ F MI ++ KPD VT++
Sbjct: 346 DLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVF 405
Query: 352 VGCSH-----------------------------------AGLVDEARKLFDEMESVYGV 376
C H G +++AR F EM
Sbjct: 406 SACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEM-----A 460
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMP---MGGDVFVWSGLLGGCRIHGNVEIAEA 433
+K+L Y + L G E+++++ KM +G D + G+L C G +E
Sbjct: 461 TKDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWK 520
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
E +K D Y + D+ + E+ VK+ +S+
Sbjct: 521 VFE---SIKVPDVDHYACMIDMLGRVGKLEEAVKLIQSM 556
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 237/428 (55%), Gaps = 1/428 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + +P + S+ T++ H + AV L+SQM P+ F +L A
Sbjct: 328 LEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGA 387
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + IH+Q LK+ +VFV ++L+ +YC +L DAQ +F + +++V
Sbjct: 388 CASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCW 447
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI GY + A +LF +MP R+ SW ++++GYAQ+ Q +A++ F M+
Sbjct: 448 NSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQS 507
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P I S L ACA L LE GK +H I I+ F+ T L D YAK G ++++ +
Sbjct: 508 PGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRV 567
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F ++N W AM+ GLA +G S++ F MI A I P+ T L L CSH+GLV
Sbjct: 568 FYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLV 627
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ A F+ M++ G+S + KHY CM D+L RAG + EA +++ K+ + W+ LL
Sbjct: 628 EHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLS 686
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C I+ N E+ E AA+ + +L ++ Y +L+++YA+ +W+D ++R + +KK+
Sbjct: 687 ACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKD 746
Query: 481 AGCSLIQL 488
GCS +Q+
Sbjct: 747 GGCSWVQI 754
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 185/398 (46%), Gaps = 34/398 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ ++ P S + +I L P +A+ +F +M + + P+ + +++AC
Sbjct: 198 AVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIG 257
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
LA +I +K + ++ V NSL+ +Y A+ +FDE+ RDVVS
Sbjct: 258 AGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTA 317
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y + GDL AR++ D MP R+ VSWGTLVA + Q +EA+ L+ M+ +P+
Sbjct: 318 LLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPN 377
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC----------- 291
S L ACA L +L G+ IH + F+S+ L+D Y KC
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 292 ---------------GYINT-----AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
GY N A E+F+ +N+ +WN+++ G A + +L
Sbjct: 438 SLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKS 497
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M+ + P +T L+ C+ ++ + + ++ + G+ + + ++D+
Sbjct: 498 FHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKL-GIKESIFVGTALSDMYA 556
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
++G ++ + + +MP DV W+ ++ G +G E
Sbjct: 557 KSGDLDSSKRVFYEMPKRNDV-AWTAMIQGLAENGFAE 593
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 139/336 (41%), Gaps = 39/336 (11%)
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A+ LFD + R VVS T++D +K G + A +L+ + P + ++AG+ ++
Sbjct: 167 ARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELP 226
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI------------------- 265
++A+ +F M+ + P+ I LVS + AC GE + +I
Sbjct: 227 KDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNS 286
Query: 266 --------------HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
R + ++R D T L+D YA+ G + A + + E+N +
Sbjct: 287 LITLYLRKGDADAARRMFDEMEVR-DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVS 345
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W ++ G + ++ +S+M+ +P+ L C+ + RK+ ++
Sbjct: 346 WGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTL 405
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ S + + D+ + + +A + +P ++ W+ L+ G N ++
Sbjct: 406 KM-ACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ-KNIVCWNSLISG--YSNNSKMV 461
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
E A E K+ + + + YA ++ D +K
Sbjct: 462 E-AEELFKKMPARNVASWNSIISGYAQNRQFIDALK 496
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 249/490 (50%), Gaps = 44/490 (8%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L + IK C Q+ QIHAH +T ++I I + + ++ +S L
Sbjct: 30 LISLIKSCTHKSQLLQIHAHIITT-----------SSIQDPIVSLRFLTRTASAPFRDLG 78
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
Y+ +F+ + P YN ++RA++L SPL + ++ M + D S F +++C
Sbjct: 79 YSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCI 138
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
+L S IH+++ G D +L S+M
Sbjct: 139 KLLSLLFGIQIHARIFINGHQADSLLLTSMM----------------------------- 169
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD--IK 240
D Y G A +LFD +P +D V+W L++ ++ + +A+ LF M +
Sbjct: 170 --DLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQ 227
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + + L ACA L LE G+ IH YI+ + +S L L+ Y++CG ++ A E+
Sbjct: 228 PDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEV 287
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+ EKN+ +W+AM+ GL+M+G GR ++ F M + ++P T L CSH GLV
Sbjct: 288 FDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLV 347
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE FD M + ++ + HYGC+ DLLGRAG++++A E+I M + D +W LLG
Sbjct: 348 DEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLG 407
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHG+ + E EH+++LK ++ G Y +L ++Y++A W+ V ++R+ + I
Sbjct: 408 ACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTT 467
Query: 481 AGCSLIQLNG 490
C+ I+LNG
Sbjct: 468 PCCTTIELNG 477
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 225/399 (56%), Gaps = 4/399 (1%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS--LAQTIHSQVLKLGF-ICDVFVLNS 151
AV FS MR I P+ +F LL AC S S L +H KLG V V +
Sbjct: 40 AVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTA 99
Query: 152 LMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSW 211
++ +Y LR A+ +FD I ++ V+ NT+IDGY++ G + +A +FD+MP RD +SW
Sbjct: 100 ILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISW 159
Query: 212 GTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIEL 271
++ G+ + EEA+ F M + PD +A++SA++AC LG L G +HRY+
Sbjct: 160 TAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLS 219
Query: 272 NQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
R + +S L+D Y +CG + A ++F+ +++ + +WN+++VG A +G SLVY
Sbjct: 220 QDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNANESLVY 279
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F +M PDGVT GAL CSH GLV+E + F M+ Y +S ++HYGC+ DL
Sbjct: 280 FRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYGCLVDLYS 339
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEI-AEAAAEHVMKLKPEDGGVYK 450
RAG +E+A +++ MPM + V LL CR HGN I AE +++ L + Y
Sbjct: 340 RAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKYITDLDVKSHSNYV 399
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+L+++YA +WE K+RR + +KK G S I+++
Sbjct: 400 ILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYSSIEID 438
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 37/264 (14%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ +F+ +P S+ +I A+ F +M+ + PD+ + + AC+
Sbjct: 144 AVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACTN 203
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + S +H VL F +V V NSL+ +YC + A+++FD++ R VVS N++
Sbjct: 204 LGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSV 263
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+A + E++ F M PD
Sbjct: 264 I-------------------------------VGFAANGNANESLVYFRKMQREGFTPDG 292
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEI 300
+ AL+AC+ +G +E+G + ++ + R++ + LVD Y++ G + A +
Sbjct: 293 VTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHY--GCLVDLYSRAGRLEDAFIV 350
Query: 301 FESSQEK-NLFTWNAMLVGLAMHG 323
ES K N ++L HG
Sbjct: 351 VESMPMKPNEVVIGSLLAACRNHG 374
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 133/343 (38%), Gaps = 89/343 (25%)
Query: 209 VSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC--------------- 253
VSW + + ++ + EA++ F +M I+P++I ++ LSAC
Sbjct: 22 VSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGYLLH 81
Query: 254 -----------------------ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK 290
++ G L + + + YIE +S ++D Y +
Sbjct: 82 GYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDK----NSVTWNTMIDGYMR 137
Query: 291 CGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGA 350
G ++ A+++F+ +++L +W AM+ G G +L +F M + + PD V I+ A
Sbjct: 138 NGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISA 197
Query: 351 LVGCSH-----------------------------------AGLVDEARKLFDEMESVYG 375
+ C++ G V+ AR++FD+ME
Sbjct: 198 VAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTV 257
Query: 376 VSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG---DVFVWSGLLGGCRIHGNVEIA- 431
VS G A+ G E+L +KM G D ++G L C G VE
Sbjct: 258 VSWNSVIVGFAAN-----GNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGF 312
Query: 432 --EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
+H ++ P Y L D+Y+ A R ED + S+
Sbjct: 313 QYFQMMKHDYRISPRIEH-YGCLVDLYSRAGRLEDAFIVVESM 354
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 237/428 (55%), Gaps = 1/428 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + +P + S+ T++ H + AV L+SQM P+ F +L A
Sbjct: 328 LEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGA 387
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + IH+Q LK+ +VFV ++L+ +YC +L DAQ +F + +++V
Sbjct: 388 CASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCW 447
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI GY + A +LF +MP R+ SW ++++GYAQ+ Q +A++ F M+
Sbjct: 448 NSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQS 507
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P I S L ACA L LE GK +H I I+ F+ T L D YAK G ++++ +
Sbjct: 508 PGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRV 567
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F ++N W AM+ GLA +G S++ F MI A I P+ T L L CSH+GLV
Sbjct: 568 FYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLV 627
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ A F+ M++ G+S + KHY CM D+L RAG + EA +++ K+ + W+ LL
Sbjct: 628 EHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLS 686
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C I+ N E+ E AA+ + +L ++ Y +L+++YA+ +W+D ++R + +KK+
Sbjct: 687 ACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKD 746
Query: 481 AGCSLIQL 488
GCS +Q+
Sbjct: 747 GGCSWVQI 754
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 185/398 (46%), Gaps = 34/398 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ ++ P S + +I L P +A+ +F +M + + P+ + +++AC
Sbjct: 198 AVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIG 257
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
LA +I +K + ++ V NSL+ +Y A+ +FDE+ RDVVS
Sbjct: 258 AGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTA 317
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y + GDL AR++ D MP R+ VSWGTLVA + Q +EA+ L+ M+ +P+
Sbjct: 318 LLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPN 377
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC----------- 291
S L ACA L +L G+ IH + F+S+ L+D Y KC
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 292 ---------------GYINT-----AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
GY N A E+F+ +N+ +WN+++ G A + +L
Sbjct: 438 SLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKS 497
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M+ + P +T L+ C+ ++ + + ++ + G+ + + ++D+
Sbjct: 498 FHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKL-GIKESIFVGTALSDMYA 556
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
++G ++ + + +MP DV W+ ++ G +G E
Sbjct: 557 KSGDLDSSKRVFYEMPKRNDV-AWTAMIQGLAENGFAE 593
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 139/336 (41%), Gaps = 39/336 (11%)
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A+ LFD + R VVS T++D +K G + A +L+ + P + ++AG+ ++
Sbjct: 167 ARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELP 226
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI------------------- 265
++A+ +F M+ + P+ I LVS + AC GE + +I
Sbjct: 227 KDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNS 286
Query: 266 --------------HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
R + ++R D T L+D YA+ G + A + + E+N +
Sbjct: 287 LITLYLRKGDADAARRMFDEMEVR-DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVS 345
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W ++ G + ++ +S+M+ +P+ L C+ + RK+ ++
Sbjct: 346 WGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTL 405
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ S + + D+ + + +A + +P ++ W+ L+ G N ++
Sbjct: 406 KM-ACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ-KNIVCWNSLISG--YSNNSKMV 461
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
E A E K+ + + + YA ++ D +K
Sbjct: 462 E-AEELFKKMPARNVASWNSIISGYAQNRQFIDALK 496
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 233/426 (54%), Gaps = 33/426 (7%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A ++FN I + S+N ++ L AV L QM+ P+ +F +L AC++
Sbjct: 264 ASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACAR 323
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + IH++ ++ G D+FV N L
Sbjct: 324 IGFLRPGKEIHARAIRTGSSVDLFV-------------------------------SNAL 352
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
D Y K G L AR++F ++ RD VS+ L+ GY+Q+ C E+++LF M +K D
Sbjct: 353 TDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDV 411
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
++ + +SACA L L+QGK +H + F++ L+DFY KCG I+ A ++F
Sbjct: 412 VSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQ 471
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
++ +WN+M++G M G +++ F M E ++ D V+ + L CSH GLV+E
Sbjct: 472 IPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEG 531
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+K F+ M+ V + HY CM DLLGRAGLIEEA+++I+ +P+ D VW LLG CR
Sbjct: 532 KKYFEHMQ-VQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACR 590
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
IHG +E+A AAEH+ KLKP+ G Y VL+++YA A +W++ ++R+ + + KKN GC
Sbjct: 591 IHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGC 650
Query: 484 SLIQLN 489
S +Q++
Sbjct: 651 SWVQID 656
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 42/289 (14%)
Query: 110 DFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF 169
D ++FPF+L+AC+ S + IH V KLGF DVFV N+L+ LF
Sbjct: 6 DDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLL--------------LF 51
Query: 170 DEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
Y G L +++FD M RD VSW +++ ++ EAI
Sbjct: 52 -----------------YGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIH 94
Query: 230 LFCNM-MDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFY 288
LFC M + +P+ +++VS L CA L + G+ IH Y+ + + LVD Y
Sbjct: 95 LFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVY 154
Query: 289 AKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTIL 348
KCGY+ + +F+ E+N +WNA++ LA + +L F MI+ +KP+ VT
Sbjct: 155 GKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFS 214
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
L LV+ KLFD + ++G S +G +D+ LI+
Sbjct: 215 SML-----PVLVE--LKLFDFGKEIHGFSLR---FGLESDIFVANALID 253
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 42/369 (11%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ I + S+N II + +A+ +F M + P+ +F +L +L
Sbjct: 166 VFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKL 225
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IH L+ G D+FV N LID
Sbjct: 226 FDFGKEIHGFSLRFGLESDIFV-------------------------------ANALIDM 254
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
Y K+G A +F+++ ++ VSW +VA +AQ+ A+ L M P+++
Sbjct: 255 YAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTF 314
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ L ACAR+G L GK IH VD F+S L D YAKCG +N A +F+ S
Sbjct: 315 TNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKISL- 373
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
++ ++N +++G + SL F M +K D V+ +G + C++ + + +++
Sbjct: 374 RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEV 433
Query: 367 FDEMESVYGVSKELKHY----GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
V K L + + D + G I+ A ++ +++P D W+ ++ G
Sbjct: 434 HG-----LAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP-SRDTASWNSMILGY 487
Query: 423 RIHGNVEIA 431
+ G + IA
Sbjct: 488 GMLGELTIA 496
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 35/340 (10%)
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLC 125
+F+ + S+N++I ++ A+ LF +M S P+ S +L C+ L
Sbjct: 64 VFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH V+K G D+Q V N L+D
Sbjct: 124 DGVTGRQIHCYVVKTGL---------------------DSQ----------VTVGNALVD 152
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y K G + +R++FD + R+ VSW ++ A ++ ++A+++F M+D +KP+++
Sbjct: 153 VYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVT 212
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
S L L + GK IH + + D F++ L+D YAK G A +F
Sbjct: 213 FSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIG 272
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK-PDGVTILGALVGCSHAGLVDEAR 364
EKN+ +WNAM+ A + L L+ V R ++A + P+ VT L C+ G + +
Sbjct: 273 EKNIVSWNAMVANFAQNRL-ELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGK 331
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIK 404
++ G S +L + D+ + G + A + K
Sbjct: 332 EIHARAIRT-GSSVDLFVSNALTDMYAKCGCLNLARRVFK 370
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+ ++ D+ L ACA +++G+ IH + D F+ L+ FY CG +
Sbjct: 1 MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCS 355
+F+ E+++ +WN+++ ++HG ++ F M + + +P+ V+I+ L C+
Sbjct: 61 VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120
Query: 356 -----------------------------------HAGLVDEARKLFDEMESVYGVSKEL 380
G V ++R++FDE+ GVS
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVS--- 177
Query: 381 KHYGCMADLLGRAGLIEEALEMIKKMPMGG 410
+ + L ++ALEM + M GG
Sbjct: 178 --WNAIITSLAYLERNQDALEMFRLMIDGG 205
>gi|357517875|ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523248|gb|AET03702.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 510
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 247/484 (51%), Gaps = 45/484 (9%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ CKTI +I Q HA + G H + A K I S + +A
Sbjct: 27 LHHCKTIDRIKQTHAQIIIGG-------HKQDPFIAA----KLIDKYSQLGGTNVEHARK 75
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+++ F +N +I+ + A+ +++ MR P+ Y++PF+L+AC
Sbjct: 76 VFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERD 135
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ IH V+K G D+FV N+ + Y
Sbjct: 136 CLKGRIIHGNVVKCGLEFDLFVGNAFVAFY------------------------------ 165
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK--PDNI 244
K ++ +R++FD M RD VSW ++++GY + +EA+ LFC+M+ D PDN
Sbjct: 166 -AKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNA 224
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
LV+ L A A ++ G IH YI +++D + GL+ Y+ CGYI A +F+
Sbjct: 225 TLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQI 284
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
++N+ W+A++ MHG + +L F +++E + DG+ L L CSHAG+ +E
Sbjct: 285 PDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGW 344
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
LF ME+ YGV K HY CM DLLGRAG +E+A+E+I+ MP+ V+ LLG RI
Sbjct: 345 HLFQTMET-YGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYGALLGASRI 403
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
H N+E+AE AAE + L P + G Y +LA +Y + RW+D ++R+ + +IKK G S
Sbjct: 404 HKNIELAELAAEKLFVLDPNNAGRYVILAQMYEDEGRWKDAARLRKIIREKEIKKPIGYS 463
Query: 485 LIQL 488
++L
Sbjct: 464 SVEL 467
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 239/449 (53%), Gaps = 8/449 (1%)
Query: 41 LYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFS 100
L T+ + + S L A +F IP P SYNT++ + S+ A F
Sbjct: 3 LKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFE 62
Query: 101 QMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
M P S+ ++ +Q A+ + + +V N+++ Y
Sbjct: 63 DMPIKDTP----SWNTMITGFAQNQQMDKARDL----FLIMPTKNVVTWNAMISGYVECG 114
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
L A +LF++ ++ VV+ +I GY+K G + A +LF++MP ++ V+W ++AGY +
Sbjct: 115 DLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIE 174
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
+ + E+ ++LF M+ I+P++ L SAL C+ L L+ G+ +H+ + + + D+
Sbjct: 175 NHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTA 234
Query: 281 STGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI 340
T L+ Y KCG + ++F +++ TWNAM+ G A HG G+ +L F MIE +
Sbjct: 235 GTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGM 294
Query: 341 KPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEAL 400
KPD +T + L+ C+HAG D K F M YG+ + HY CM DLLGRAG + EA+
Sbjct: 295 KPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAV 354
Query: 401 EMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANAD 460
++I+KMP V+ LLG CRIH N E+AE A++ ++ L P Y LA+VYA
Sbjct: 355 DLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATK 414
Query: 461 RWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
RW+ V ++R+S+ + K+ K G S I++
Sbjct: 415 RWDHVARVRKSMKSCKVVKTPGYSWIEVK 443
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 255/482 (52%), Gaps = 45/482 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
+ Q+ QI A +T + P ++ L A+ + ++ + A IF ++
Sbjct: 1 MAQVLQIQAQLITSPI----PSSVVDPNLIAVKLIGACADHAN-----VRQAALIFAHLA 51
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFS-QMRTVSIP-PDFYSFPFLLRACSQLCSHSLA 130
P+ F++N ++A S +A+ F+ Q+ + + P PD ++F +L+AC+ L
Sbjct: 52 SPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNG 111
Query: 131 QTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKA 190
Q IH+ V K GF ++FV NSL ID Y KA
Sbjct: 112 QKIHAMVTKQGFESNLFVRNSL-------------------------------IDMYFKA 140
Query: 191 GDLAHARQLFDRMPFRD--AVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALV 247
G L AR LFD M RD V W ++AGYAQ+++ +AI++F M + P+++ LV
Sbjct: 141 GYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLV 200
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEK 307
S L ACA LG L+ GK I +I ++ + FL L D YAKCG I A +F +E+
Sbjct: 201 SVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEER 260
Query: 308 NLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
++ +W+ ++ GLAM+G + F M++ KP+ V +G L C+HAGLV + F
Sbjct: 261 DVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCF 320
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ M+ YGVS +++HYGC+ DLL RAG +++A +MI MPM +V +W LLGGCRI+ +
Sbjct: 321 NTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRD 380
Query: 428 VEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+ +H+++L + G Y LA+VY++ R +D K R + + K GCS I+
Sbjct: 381 SGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIE 440
Query: 488 LN 489
++
Sbjct: 441 VD 442
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 237/428 (55%), Gaps = 1/428 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A + + +P + S+ T++ H + AV L+SQM P+ F +L A
Sbjct: 328 LEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGA 387
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L + IH+Q LK+ +VFV ++L+ +YC +L DAQ +F + +++V
Sbjct: 388 CASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCW 447
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI GY + A +LF +MP R+ SW ++++GYAQ+ Q +A++ F M+
Sbjct: 448 NSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQS 507
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
P I S L ACA L LE GK +H I I+ F+ T L D YAK G ++++ +
Sbjct: 508 PGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRV 567
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F ++N W AM+ GLA +G S++ F MI A I P+ T L L CSH+GLV
Sbjct: 568 FYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLV 627
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+ A F+ M++ G+S + KHY CM D+L RAG + EA +++ K+ + W+ LL
Sbjct: 628 EHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLS 686
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C I+ N E+ E AA+ + +L ++ Y +L+++YA+ +W+D ++R + +KK+
Sbjct: 687 ACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKD 746
Query: 481 AGCSLIQL 488
GCS +Q+
Sbjct: 747 GGCSWVQI 754
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 185/398 (46%), Gaps = 34/398 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A+ ++ P S + +I L P +A+ +F +M + + P+ + +++AC
Sbjct: 198 AVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIG 257
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
LA +I +K + ++ V NSL+ +Y A+ +FDE+ RDVVS
Sbjct: 258 AGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTA 317
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D Y + GDL AR++ D MP R+ VSWGTLVA + Q +EA+ L+ M+ +P+
Sbjct: 318 LLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPN 377
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC----------- 291
S L ACA L +L G+ IH + F+S+ L+D Y KC
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 292 ---------------GYINT-----AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
GY N A E+F+ +N+ +WN+++ G A + +L
Sbjct: 438 SLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKS 497
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F M+ + P +T L+ C+ ++ + + ++ + G+ + + ++D+
Sbjct: 498 FHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKL-GIKESIFVGTALSDMYA 556
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
++G ++ + + +MP DV W+ ++ G +G E
Sbjct: 557 KSGDLDSSKRVFYEMPKRNDV-AWTAMIQGLAENGFAE 593
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 139/336 (41%), Gaps = 39/336 (11%)
Query: 165 AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQC 224
A+ LFD + R VVS T++D +K G + A +L+ + P + ++AG+ ++
Sbjct: 167 ARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELP 226
Query: 225 EEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI------------------- 265
++A+ +F M+ + P+ I LVS + AC GE + +I
Sbjct: 227 KDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNS 286
Query: 266 --------------HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
R + ++R D T L+D YA+ G + A + + E+N +
Sbjct: 287 LITLYLRKGDADAARRMFDEMEVR-DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVS 345
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEME 371
W ++ G + ++ +S+M+ +P+ L C+ + RK+ ++
Sbjct: 346 WGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTL 405
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ S + + D+ + + +A + +P ++ W+ L+ G N ++
Sbjct: 406 KM-ACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ-KNIVCWNSLISG--YSNNSKMV 461
Query: 432 EAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVK 467
E A E K+ + + + YA ++ D +K
Sbjct: 462 E-AEELFKKMPARNVASWNSIISGYAQNRQFIDALK 496
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 214/349 (61%), Gaps = 3/349 (0%)
Query: 145 DVFVLNSLMHVYCVFHRLRDAQELFDEIL-YRDVVSCNTLIDGYVKAGDLAHARQLFDRM 203
D ++ ++L+ Y L +++ +FDE+ + D + N L+ Y + G + A LF M
Sbjct: 118 DPYLASALVASYARSGHLAESRRVFDELPPHSDAAARNALLSAYARCGRVDDAESLFAGM 177
Query: 204 PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD-LDIKPDNIALVSALSACARLGELEQG 262
P R+ +SW +V+GYAQ+ + EEA++ F M + ++P+ + + S L ACA +G L G
Sbjct: 178 PDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTVSSVLPACAAVGALALG 237
Query: 263 KNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES-SQEKNLFTWNAMLVGLAM 321
+ + RY + + +++ LV+ YAKCG I A +F ++++L +WN+M++ A+
Sbjct: 238 RKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIMAFAV 297
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELK 381
HGL R L F ++ KPDG+T +G ++ C+H GLVDE + LF+ M +G+ ++
Sbjct: 298 HGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKLLFNSMREEFGLKPRIE 357
Query: 382 HYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKL 441
HYGCM DLLGRAGL++EA +I MPM D +W LLG C HGN+E+AE A E +M+L
Sbjct: 358 HYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHGNLELAEVAVEKLMRL 417
Query: 442 KPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+P++ +L+++YA+ +W+ V ++ + L KK+AG S I+L+G
Sbjct: 418 EPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHKKSAGYSFIELDG 466
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 248/477 (51%), Gaps = 48/477 (10%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY-PST 76
Q+HAH L GLL SP + TT + F +++ S P+ L+ Y PST
Sbjct: 40 QLHAHLLRTGLLIFSP--VTTT-----SAFLSLAAVSLPSHRALAVLDHHLTTPHYLPST 92
Query: 77 FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQ 136
F N+I+RA S P +A+ ++R + + ++ LL+ CS + A+ +H+
Sbjct: 93 FQCNSILRA---LSDPSDALRFLCRVRALGRRGNAFTLAILLKP---RCSLAHARQLHAN 146
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
V+ G + D + SLM Y GD A
Sbjct: 147 VVAEGHLRDALLATSLMRCY-------------------------------ANRGDGDGA 175
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM--DLDIKPDNIALVSALSACA 254
R+LFD MP RDAV+W L+ YA++ + ++A++LF M D + +PD++ + L AC+
Sbjct: 176 RKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACS 235
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
LG L+ G+ + Y E + + + L+ Y +CG ++ A +F + +K++ TW A
Sbjct: 236 SLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTA 295
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
M+ GLA +G G ++ F MI + + PD T G L CSH+GLVDE + FD M Y
Sbjct: 296 MISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEY 355
Query: 375 GVSKELKHYGCMADLLGRAGLIEEALEMI-KKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
G+ ++HYGC+ DL+GRAGL++EA E + +M + D +W LLG CRIHG+V++ E
Sbjct: 356 GLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGER 415
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++++LK + G Y +L + YA W V +IR+ + I+ GC+ ++ NG
Sbjct: 416 VIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVEHNG 472
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 248/477 (51%), Gaps = 48/477 (10%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPY-PST 76
Q+HAH L GLL SP + TT + F +++ S P+ L+ Y PST
Sbjct: 54 QLHAHLLRTGLLIFSP--VTTT-----SAFLSLAAVSLPSHRALAVLDHHLTTPHYLPST 106
Query: 77 FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQ 136
F N+I+RA S P +A+ ++R + + ++ LL+ CS + A+ +H+
Sbjct: 107 FQCNSILRA---LSDPSDALRFLCRVRALGRRGNAFTLAILLKP---RCSLAHARQLHAN 160
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
V+ G + D + SLM Y GD A
Sbjct: 161 VVAEGHLRDALLATSLMRCY-------------------------------ANRGDGDGA 189
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM--DLDIKPDNIALVSALSACA 254
R+LFD MP RDAV+W L+ YA++ + ++A++LF M D + +PD++ + L AC+
Sbjct: 190 RKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACS 249
Query: 255 RLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNA 314
LG L+ G+ + Y E + + + L+ Y +CG ++ A +F + +K++ TW A
Sbjct: 250 SLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTA 309
Query: 315 MLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
M+ GLA +G G ++ F MI + + PD T G L CSH+GLVDE + FD M Y
Sbjct: 310 MISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEY 369
Query: 375 GVSKELKHYGCMADLLGRAGLIEEALEMI-KKMPMGGDVFVWSGLLGGCRIHGNVEIAEA 433
G+ ++HYGC+ DL+GRAGL++EA E + +M + D +W LLG CRIHG+V++ E
Sbjct: 370 GLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGER 429
Query: 434 AAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
++++LK + G Y +L + YA W V +IR+ + I+ GC+ ++ NG
Sbjct: 430 VIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVEHNG 486
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 188/292 (64%)
Query: 199 LFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGE 258
LF MP RD VSW +++A YAQ + EA+ LF M + +KP +VS LSACA LG
Sbjct: 170 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 229
Query: 259 LEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVG 318
L++G ++H YI N+I V+S + T LVD YAKCG I+ A ++F + + K++ WN ++ G
Sbjct: 230 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 289
Query: 319 LAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSK 378
+A+HG + + F M EA ++P+ +T + L CSHAG+VDE +KL D M S YG+
Sbjct: 290 MAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEP 349
Query: 379 ELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHV 438
+++HYGC+ DLL RAGL+EEA+E+I MPM + LLGGCRIHGN E+ E + +
Sbjct: 350 KVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRL 409
Query: 439 MKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+ L+P G Y +L+++YA A +W+D K+R + I K G S+I+L G
Sbjct: 410 INLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKG 461
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 152/319 (47%), Gaps = 39/319 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+N+++ + P A+ LF QMR V + P + LL AC+
Sbjct: 167 AFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAH 226
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + L + +H +H Y + D + + + L
Sbjct: 227 LGA--LDKGLH------------------LHTY-----------INDNRIEVNSIVGTAL 255
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D Y K G ++ A Q+F+ M +D ++W T++AG A +EA +LF M + ++P++
Sbjct: 256 VDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPND 315
Query: 244 IALVSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEI 300
I V+ LSAC+ G +++G+ + + + + +V+ + ++D A+ G + A+E+
Sbjct: 316 ITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY--GCVIDLLARAGLLEEAMEL 373
Query: 301 FES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+ E N A+L G +HG L + R+I + G IL + + + A
Sbjct: 374 IGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAA-AKK 432
Query: 360 VDEARKLFDEMESVYGVSK 378
D+ARK+ + M+ V G+SK
Sbjct: 433 WDDARKVRNLMK-VNGISK 450
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 272 NQIRVDS-FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
N++ VD L + + G + A +F +++ +WN+ML A G +L
Sbjct: 141 NEVGVDKGVLKVWMHNNKNTFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALA 200
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD-------EMESVYGVSKELKHY 383
F +M +KP T++ L C+H G +D+ L E+ S+ G +
Sbjct: 201 LFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTA------ 254
Query: 384 GCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
+ D+ + G I A ++ M DV W+ ++ G IHG+V+ A+
Sbjct: 255 --LVDMYAKCGKISLATQVFNAME-SKDVLAWNTIIAGMAIHGHVKEAQ 300
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 240/428 (56%), Gaps = 7/428 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +FN +P+ +T S+ +I + A+V + + P S ACS
Sbjct: 371 AEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSN 430
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + +HS +K G + +V N+L+ +Y + + +++FD + +D VS N+
Sbjct: 431 IEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSF 490
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ V+ AR +F+ MP D VSW T+++ AQ+DQ EA+++F +M+ P+
Sbjct: 491 MSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNP 550
Query: 244 IALVSALSACARLGELEQGKNIHRY-IELNQIRVDSFL--STGLVDFYAKCGYINTAIEI 300
L L LG + G+ IH I+L +DS L + LV Y KC ++ +++
Sbjct: 551 PILTILLGLSGNLGAPQLGQQIHTIAIKLG---MDSGLVVANALVSMYFKCSSADS-LKV 606
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F+S +E+++FTWN ++ G A HGLGR ++ + M+ A + P+ VT +G L CSH+GLV
Sbjct: 607 FDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLV 666
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE + F M S YG++ L+HY CM DLLGRAG ++ A I MP+ D +WS LLG
Sbjct: 667 DEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLG 726
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C+IH NVEI AAE + ++P + G Y +L+++Y++ W++V K+R+ + + K+
Sbjct: 727 ACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKD 786
Query: 481 AGCSLIQL 488
GCS +Q+
Sbjct: 787 PGCSWMQI 794
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 174/377 (46%), Gaps = 29/377 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSP-----LNAVVLFSQMRTVSIPPDFYSFP 115
L A +F+++P+ ++N++I A+ P L + +RT +I Y+
Sbjct: 49 LHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARA 108
Query: 116 FLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
+R + V + + N+++ Y + A++LFD + R
Sbjct: 109 GRVRDARR-------------VFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSR 155
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
DV S NT++ GY + + AR LF+RMP R+ VSW +++GY +Q A +F M+
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAK-CGYI 294
+ P+ LVS LSA LG+ ++IH + D + T +++ Y K +
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNML 275
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
++A++ FE +N +TW+ ++ L+ G + + R + P ++ L G
Sbjct: 276 DSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV-PSRTSM---LTGL 331
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ G +D+A+ LFD++ VS G M + +++EA ++ +MP +
Sbjct: 332 ARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQN-----EMVDEAEDLFNRMPF-RNTIS 385
Query: 415 WSGLLGGCRIHGNVEIA 431
W+G++ G +G E A
Sbjct: 386 WAGMIAGYARNGRSEQA 402
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 8/236 (3%)
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
+ R+ DA+ LFD+I +VVS N +I GY++ + A LF+RMPFR+ +SW ++AGY
Sbjct: 334 YGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGY 393
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
A++ + E+A+ + + P +L S+ AC+ + LE GK +H + +S
Sbjct: 394 ARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNS 453
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA 338
++ L+ Y K I + +IF+ K+ ++N+ + L + L + F+ M
Sbjct: 454 YVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM--- 510
Query: 339 RIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
PD V+ + C+ A +EA ++F M +EL + + LLG +G
Sbjct: 511 -PSPDVVSWTTIISACAQADQGNEAVEIFRSMLH----ERELPNPPILTILLGLSG 561
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 20/238 (8%)
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+ G L AR++FD MPFRD ++W +++ Y + + L + +++ I
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTI---- 100
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LS AR G + ++ R + +R ++ +V Y + G I A ++F++ ++
Sbjct: 101 LLSGYARAGRV---RDARRVFDGMGVR-NTVAWNAMVTCYVQNGDITLARKLFDAMPSRD 156
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLF- 367
+ +WN ML G L + F RM E V I G ++ H D R +
Sbjct: 157 VSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLC 216
Query: 368 ----DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E ++ V ++H LG+ G++E ++ K DV V + +L G
Sbjct: 217 EGMTPEQPNLVSVLSAVRH-------LGKPGILESIHVLVHKTGFERDVVVGTAILNG 267
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 244/433 (56%), Gaps = 23/433 (5%)
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRT------------VSIPPDFYSFPFLLRACS 122
S F Y + + AH P LFS + T + + PD ++FP +L
Sbjct: 58 SHFPYASRLLAHHPAPHPALFNPLFSALPTRHAARLLALMLSLPLHPDHFTFPRILPGAQ 117
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF-----DEILYRDV 177
L H +AQ +H+ +LKLGF LN+L+ Y R A +F D + DV
Sbjct: 118 PL--HLVAQ-LHALLLKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGDAL---DV 171
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
VS T++ G VK G + AR+LFD MP R+ VSW +++GY ++ + +A+++F M
Sbjct: 172 VSWTTMVGGLVKLGRVDDARELFDGMPERNLVSWNAMMSGYVKTGRFLDALEVFDEMRAR 231
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ + +A+ AC G L +G+ +HR++E + I +D L+T +VD Y KCG + A
Sbjct: 232 GVDGNAFVAATAVVACTGAGALARGREVHRWVERSGIEMDDKLATAVVDMYCKCGCVEEA 291
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+FE+ + L +WN M+ G A+HG G +L F M + PD VT++ L C+HA
Sbjct: 292 WRVFEALPARGLTSWNCMIGGFAVHGRGEDALNLFGLMEREGVAPDDVTLVNVLTACAHA 351
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
G+V E R F+ + YG+ +++HYGCM DL GRAG +EEA ++I+ MPM DV V
Sbjct: 352 GMVSEGRHYFNYISQRYGIVPKMEHYGCMVDLYGRAGQLEEAKKVIQDMPMEPDVGVLGA 411
Query: 418 LLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
L G +IHG+V++ EA V++L P++ G Y +LA++ A A RWEDV ++RR +D +
Sbjct: 412 LFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNV 471
Query: 478 KKNAGCSLIQLNG 490
K AG S+I++ G
Sbjct: 472 SKEAGRSVIEVQG 484
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 230/429 (53%), Gaps = 31/429 (7%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F+ + ++N+II A+ +F MR + PD + L A
Sbjct: 220 LEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASA 279
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+Q A+++H V++ G+ D D+++
Sbjct: 280 IAQGGDGRSAKSLHCYVMRRGWDVD------------------------------DIIAG 309
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-I 239
N ++D Y K ++ A+++FD MP +D+VSW TL+ GY Q+ EA++ + +M + +
Sbjct: 310 NAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGL 369
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
K VS L A + LG L+QG +H + VD ++ T L+D YAKCG + A+
Sbjct: 370 KAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAML 429
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+FE ++ WNA++ GL +HG G +L FSRM + IKPD VT + L CSHAGL
Sbjct: 430 LFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGL 489
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VD+ R FD M+ Y + KHY CMAD+LGRAG ++EA I+ MP+ D VW LL
Sbjct: 490 VDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALL 549
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G CRIHGNVE+ + A++++ +L PE+ G Y +++++YA +W+ V ++R + ++K
Sbjct: 550 GACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQK 609
Query: 480 NAGCSLIQL 488
G S I++
Sbjct: 610 TPGWSSIEV 618
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 184/413 (44%), Gaps = 34/413 (8%)
Query: 36 ILTTILYAITTFKP--------ISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHT 87
+L IL F+P I +A S + +A ++ + PS F+ +++ A+
Sbjct: 55 LLRHILSCAYPFRPDGFTFPSLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYL 114
Query: 88 LFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC---------SQLCSHSLA--QTIHSQ 136
F A +F +M +P L R ++ +A S
Sbjct: 115 RFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSS 174
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
VL + + VL +MHVY V H L +ELF CN LID Y K G L A
Sbjct: 175 VLPMCVLLGDQVLALVMHVYAVKHGLD--KELF---------VCNALIDVYGKLGMLEEA 223
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
+ +F M RD V+W ++++G Q Q A+++F M + PD + LVS SA A+
Sbjct: 224 QCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQG 283
Query: 257 GELEQGKNIHRYIELNQIRVDSFLS-TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAM 315
G+ K++H Y+ VD ++ +VD YAK I A +F+S ++ +WN +
Sbjct: 284 GDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTL 343
Query: 316 LVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVY 374
+ G +GL ++ + M + +K T + L SH G + + ++ +
Sbjct: 344 ITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMH-ALSIKI 402
Query: 375 GVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
G++ ++ C+ DL + G + EA+ + +KMP W+ ++ G +HG+
Sbjct: 403 GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPR-RSTGPWNAIISGLGVHGH 454
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 159/370 (42%), Gaps = 41/370 (11%)
Query: 80 NTIIRAHTLFSSPLNAVVLFSQMRTVSIP--PDFYSFPFLLRACSQLCSHSLAQTIHSQV 137
NT+I A + + P A L + + + P PD ++FP L+RA S++ A +H+
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAP---SNASAAQLHACA 93
Query: 138 LKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
L+LG + VF SL+H Y F R+ +A ++FDE+ RDV + N ++ G + A A
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
LF RM G VAG D + + S L C L
Sbjct: 154 VGLFGRMV-------GEGVAG------------------------DTVTVSSVLPMCVLL 182
Query: 257 GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML 316
G+ +H Y + + + F+ L+D Y K G + A +F + ++L TWN+++
Sbjct: 183 GDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSII 242
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
G G +L F M + + PD +T++ + G A+ L +
Sbjct: 243 SGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD 302
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
++ + D+ + IE A M MP+ D W+ L+ G +G +A A E
Sbjct: 303 VDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPV-QDSVSWNTLITGYMQNG---LANEAVE 358
Query: 437 HVMKLKPEDG 446
++ +G
Sbjct: 359 RYGHMQKHEG 368
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 235/429 (54%), Gaps = 35/429 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + S+ +IR + S+ +A LF+ M+ I PD ++ ++ AC+
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
SLA+ IHSQV++ GF D+ V +L+H+Y
Sbjct: 377 SADLSLAREIHSQVVRAGFGTDLLVDTALVHMY--------------------------- 409
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
K G + ARQ+FD M RD VSW ++ Y ++ EEA + F M +++PD
Sbjct: 410 ----AKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDV 465
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIF 301
+ ++ L+AC LG L+ G I Y + + + S + G L++ K G I A IF
Sbjct: 466 VTYINLLNACGHLGALDLGMEI--YTQAIKADLVSHIPVGNALINMNVKHGSIERARYIF 523
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVD 361
E+ ++++ TWN M+ G ++HG R +L F RM++ R +P+ VT +G L CS AG V+
Sbjct: 524 ENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVE 583
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E R+ F + G+ ++ YGCM DLLGRAG ++EA +I +MP+ + +WS LL
Sbjct: 584 EGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAA 643
Query: 422 CRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
CRI+GN+++AE AAE + +P DG VY L+ +YA A WE+V K+R+ +++ ++K
Sbjct: 644 CRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQ 703
Query: 482 GCSLIQLNG 490
GC+ I++ G
Sbjct: 704 GCTWIEVEG 712
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 168/368 (45%), Gaps = 33/368 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + ++N +I + A LF +M+ P+ SF +L CS
Sbjct: 216 ARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCST 275
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + +H+Q + G + DV V +L+ +Y + C
Sbjct: 276 PEALAWGKAVHAQCMNTGLVDDVRVATALIRMY---------------------MGC--- 311
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
G + AR++FD+M RD VSW ++ GYA++ E+A LF M + I+PD
Sbjct: 312 -------GSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDR 364
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I + ++ACA +L + IH + D + T LV YAKCG I A ++F++
Sbjct: 365 ITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDA 424
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
+++ +W+AM+ +G G + F M ++PD VT + L C H G +D
Sbjct: 425 MSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLG 484
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+++ + VS + + ++ + G IE A + + M + DV W+ ++GG
Sbjct: 485 MEIYTQAIKADLVS-HIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWNVMIGGYS 542
Query: 424 IHGNVEIA 431
+HGN A
Sbjct: 543 LHGNAREA 550
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 9/277 (3%)
Query: 162 LRDA---QELFDEILYR----DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
LRDA +++ D I+ ++ NTLI + G++ ARQ FD + + V+W +
Sbjct: 74 LRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAI 133
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQI 274
+AGYAQ +EA LF M+D ++P I + L AC+ L+ GK H +
Sbjct: 134 IAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGF 193
Query: 275 RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSR 334
D + T LV Y K G ++ A ++F+ ++++ T+N M+ G A G G + F R
Sbjct: 194 VSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYR 253
Query: 335 MIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAG 394
M + KP+ ++ L L GCS + + + + + G+ +++ + + G
Sbjct: 254 MQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNT-GLVDDVRVATALIRMYMGCG 312
Query: 395 LIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
IE A + KM + DV W+ ++ G + N+E A
Sbjct: 313 SIEGARRVFDKMKV-RDVVSWTVMIRGYAENSNIEDA 348
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D+ V C L + GK + +I + +++ + L+ ++ CG + A + F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH-AGL 359
+S + K + TWNA++ G A G + + F +M++ ++P +T L L CS AGL
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,405,495,531
Number of Sequences: 23463169
Number of extensions: 307369925
Number of successful extensions: 1155383
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8196
Number of HSP's successfully gapped in prelim test: 2951
Number of HSP's that attempted gapping in prelim test: 997782
Number of HSP's gapped (non-prelim): 53426
length of query: 490
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 343
effective length of database: 8,910,109,524
effective search space: 3056167566732
effective search space used: 3056167566732
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 79 (35.0 bits)