BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042265
(490 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FLS9|PP441_ARATH Pentatricopeptide repeat-containing protein At5g61800
OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1
Length = 499
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/491 (54%), Positives = 354/491 (72%), Gaps = 13/491 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLF--LSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
+K C+T+K +HQ HA F+T G + + +L+AIT+ P +SAS + +SY
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASK---EVVSY 66
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFS-SPLNAVVLFSQMRTVSIPPDFYSFPFLLRACS 122
A S+F I PSTF +NTIIR TL S L++ F +MR S+PPDF++FPF+ +AC+
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 123 QLCSH--SLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ +L +T+H Q L+ G + D+F LN+L+ VY + + A +LFDE RDVV+
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N LIDG VKA ++ AR+LFD MP RD VSW +L++GYAQ + C EAI+LF M+ L +K
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PDN+A+VS LSACA+ G+ ++GK IH Y + ++ +DSFL+TGLVDFYAKCG+I+TA+EI
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +K LFTWNAM+ GLAMHG G L++ YF +M+ + IKPDGVT + LVGCSH+GLV
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGG----DVFVWS 416
DEAR LFD+M S+Y V++E+KHYGCMADLLGRAGLIEEA EMI++MP G + WS
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWS 426
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG- 475
GLLGGCRIHGN+EIAE AA V L PEDGGVYKV+ ++YANA+RWE+VVK+R +D
Sbjct: 427 GLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDK 486
Query: 476 KIKKNAGCSLI 486
K+KKN G S +
Sbjct: 487 KVKKNVGFSKV 497
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/484 (40%), Positives = 293/484 (60%), Gaps = 10/484 (2%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
++RC +++ QIHA L GL+ S YAIT F SS ++D L YA
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDS---------YAITKFLSFC-ISSTSSDFLPYAQI 70
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+F+ P TF +N +IR + P +++L+ +M S P + Y+FP LL+ACS L +
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
IH+Q+ KLG+ DV+ +NSL++ Y V + A LFD I D VS N++I G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
YVKAG + A LF +M ++A+SW T+++GY Q+D +EA+QLF M + D++PDN++L
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
+ALSACA+LG LEQGK IH Y+ +IR+DS L L+D YAKCG + A+E+F++ ++
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K++ W A++ G A HG GR ++ F M + IKP+ +T L CS+ GLV+E + +
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F ME Y + ++HYGC+ DLLGRAGL++EA I++MP+ + +W LL CRIH
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
N+E+ E E ++ + P GG Y A+++A +W+ + RR + + K GCS I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 487 QLNG 490
L G
Sbjct: 491 SLEG 494
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF---YAKCGYINTAIEIFE 302
L +S R + E+ K IH + + DS+ T + F ++ A +F+
Sbjct: 14 LYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFD 73
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ F WN M+ G + SL+ + RM+ + + T L CS+ +E
Sbjct: 74 GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 363 ARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGC 422
++ ++ + G ++ + + G + A + ++P DV W+ ++ G
Sbjct: 134 TTQIHAQITKL-GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV-SWNSVIKGY 191
Query: 423 RIHGNVEIA 431
G ++IA
Sbjct: 192 VKAGKMDIA 200
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/508 (37%), Positives = 294/508 (57%), Gaps = 42/508 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+F +R K++ +I Q HA L GL F + +A A++P +SYA
Sbjct: 44 SFTERAKSLTEIQQAHAFMLKTGL-FHDTFSASKLVAFA---------ATNPEPKTVSYA 93
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
SI N I P+ F++N++IRA+ S+P A+ +F +M + PD YSF F+L+AC+
Sbjct: 94 HSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAF 153
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC----------VFHRL--RDA------- 165
C + IH +K G + DVFV N+L++VY V R+ RDA
Sbjct: 154 CGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 213
Query: 166 ------------QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGT 213
+ LFDE+ R+V S N +I GY AG + A+++FD MP RD VSW
Sbjct: 214 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 273
Query: 214 LVAGYAQSDQCEEAIQLFCNMMDLDI-KPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+V YA E +++F M+D KPD LVS LSACA LG L QG+ +H YI+ +
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
I ++ FL+T LVD Y+KCG I+ A+E+F ++ ++++ TWN+++ L++HGLG+ +L F
Sbjct: 334 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 393
Query: 333 SRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGR 392
S M+ KP+G+T +G L C+H G++D+ARKLF+ M SVY V ++HYGCM DLLGR
Sbjct: 394 SEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGR 453
Query: 393 AGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVL 452
G IEEA E++ ++P + LLG C+ G +E AE A +++L D Y +
Sbjct: 454 MGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQM 513
Query: 453 ADVYANADRWEDVVKIRRSLDAGKIKKN 480
+++YA+ RWE V+ RR++ A ++ ++
Sbjct: 514 SNLYASDGRWEKVIDGRRNMRAERVNRS 541
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 353 bits (905), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/501 (37%), Positives = 292/501 (58%), Gaps = 26/501 (5%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I C+TI+ + QIHA F+ G + L A + +++ D L YA
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQM--------RDTLAAAEILRFCATSDLHHRD-LDYAHK 80
Query: 67 IFNNIPYPSTFSYNTIIR--AHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQ 123
IFN +P + FS+NTIIR + + L A+ LF +M + + P+ ++FP +L+AC++
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELF-DEILYRD------ 176
+ IH LK GF D FV+++L+ +Y + ++DA+ LF I+ +D
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 177 -------VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQ 229
+V N +IDGY++ GD AR LFD+M R VSW T+++GY+ + ++A++
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 260
Query: 230 LFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA 289
+F M DI+P+ + LVS L A +RLG LE G+ +H Y E + IR+D L + L+D Y+
Sbjct: 261 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 290 KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILG 349
KCG I AI +FE +N+ TW+AM+ G A+HG ++ F +M +A ++P V +
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 350 ALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMG 409
L CSH GLV+E R+ F +M SV G+ ++HYGCM DLLGR+GL++EA E I MP+
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440
Query: 410 GDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIR 469
D +W LLG CR+ GNVE+ + A +M + P D G Y L+++YA+ W +V ++R
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMR 500
Query: 470 RSLDAGKIKKNAGCSLIQLNG 490
+ I+K+ GCSLI ++G
Sbjct: 501 LRMKEKDIRKDPGCSLIDIDG 521
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 286/517 (55%), Gaps = 50/517 (9%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+ CK I+ + QIHA + GL+ S ++ ++Y SAS L YA +
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLM--SNLSVVGELIY---------SASLSVPGALKYAHKL 68
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH 127
F+ IP P N ++R P V L+++M + PD Y+F F+L+ACS+L
Sbjct: 69 FDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWR 128
Query: 128 SLAQTIHSQVLKLGFICDVFVLNSLM--HVYC--------VFH----------------- 160
S H +V++ GF+ + +V N+L+ H C +F
Sbjct: 129 SNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGY 188
Query: 161 ----RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
++ +A LFDE+ Y+D V+ N +I G +K ++ AR+LFDR +D V+W +++
Sbjct: 189 AKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMIS 248
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
GY +EA+ +F M D PD + ++S LSACA LG+LE GK +H YI L V
Sbjct: 249 GYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI-LETASV 307
Query: 277 DSFLSTG------LVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
S + G L+D YAKCG I+ AIE+F ++++L TWN ++VGLA+H S+
Sbjct: 308 SSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIE 366
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M ++ P+ VT +G ++ CSH+G VDE RK F M +Y + +KHYGCM D+L
Sbjct: 367 MFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDML 426
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
GRAG +EEA ++ M + + VW LLG C+I+GNVE+ + A E ++ ++ ++ G Y
Sbjct: 427 GRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 486
Query: 451 VLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQ 487
+L+++YA+ +W+ V K+R+ D ++KK G SLI+
Sbjct: 487 LLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 337 bits (865), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 264/433 (60%), Gaps = 5/433 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLN---AVVLFSQMRTVSIPPDFYSFPFL 117
L YA S+F + P P+T+ +NT+IRA +L P A+ ++ ++ + PD ++FPF+
Sbjct: 63 LRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFV 122
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ ++ + IH QV+ GF V V+ L+ +Y L DA+++FDE+L +DV
Sbjct: 123 LKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV 182
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMP--FRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
N L+ GY K G++ AR L + MP R+ VSW +++GYA+S + EAI++F M+
Sbjct: 183 NVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRML 242
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYIN 295
+++PD + L++ LSACA LG LE G+ I Y++ + L+ ++D YAK G I
Sbjct: 243 MENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 296 TAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A+++FE E+N+ TW ++ GLA HG G +L F+RM++A ++P+ VT + L CS
Sbjct: 303 KALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACS 362
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
H G VD ++LF+ M S YG+ ++HYGCM DLLGRAG + EA E+IK MP + +W
Sbjct: 363 HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIW 422
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL +H ++E+ E A ++KL+P + G Y +LA++Y+N RW++ +R +
Sbjct: 423 GSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGI 482
Query: 476 KIKKNAGCSLIQL 488
+KK AG S I++
Sbjct: 483 GVKKMAGESSIEV 495
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNI-------HRYIELNQIRVDSFLS 281
Q C M+ + DN+ + + AC+ G L ++ + Y+ IR S L
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLD 92
Query: 282 TGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIK 341
+ A I +++ + + FT+ ++ +A+ R+S V+F R I ++
Sbjct: 93 ----EPNAHSIAITVYRKLWALCAKPDTFTF-PFVLKIAV----RVSDVWFGRQIHGQVV 143
Query: 342 PDG----VTILGALVGCSHA-GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
G V ++ L+ + G + +ARK+FDEM + K++ + + G+ G +
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM-----LVKDVNVWNALLAGYGKVGEM 198
Query: 397 EEALEMIKKMP 407
+EA +++ MP
Sbjct: 199 DEARSLLEMMP 209
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 278/485 (57%), Gaps = 14/485 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
F++R K+ + +I+A + GL S + T + + + YA
Sbjct: 16 FLQRVKSRNEWKKINASIIIHGL---SQSSFMVTKMVDFCD----------KIEDMDYAT 62
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP-PDFYSFPFLLRACSQL 124
+FN + P+ F YN+IIRA+T S + + ++ Q+ S PD ++FPF+ ++C+ L
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S L + +H + K G V N+L+ +Y F L DA ++FDE+ RDV+S N+L+
Sbjct: 123 GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY + G + A+ LF M + VSW +++GY EA+ F M I+PD I
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+L+S L +CA+LG LE GK IH Y E + + L++ Y+KCG I+ AI++F
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+ K++ +W+ M+ G A HG ++ F+ M A++KP+G+T LG L CSH G+ E
Sbjct: 303 EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGL 362
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
+ FD M Y + +++HYGC+ D+L RAG +E A+E+ K MPM D +W LL CR
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRT 422
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
GN+++A A +H+++L+PED G Y +LA++YA+ +WEDV ++R+ + +KK G S
Sbjct: 423 PGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Query: 485 LIQLN 489
LI++N
Sbjct: 483 LIEVN 487
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 293/548 (53%), Gaps = 79/548 (14%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+ +C + Q+ Q+HA + + L HI ++ A++ + + A+
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLH--EDLHIAPKLISALSLCRQTN-----------LAVR 72
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCS 126
+FN + P+ N++IRAH S P A +FS+M+ + D +++PFLL+ACS
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYC------------VFHR------------- 161
+ + +H+ + KLG D++V N+L+ Y +F +
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
Query: 162 --------LRDAQELFDEILYRDVVSCNTLIDGYV------------------------- 188
LRDA+ LFDE+ RD++S NT++DGY
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWST 252
Query: 189 ------KAGDLAHARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
KAGD+ AR +FD+MP ++ V+W ++AGYA+ +EA +L M+ +K
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
D A++S L+AC G L G IH ++ + + ++++ L+D YAKCG + A ++
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +K+L +WN ML GL +HG G+ ++ FSRM I+PD VT + L C+HAGL+
Sbjct: 373 FNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLI 432
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
DE F ME VY + +++HYGC+ DLLGR G ++EA+++++ MPM +V +W LLG
Sbjct: 433 DEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLG 492
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CR+H V+IA+ ++++KL P D G Y +L+++YA A+ WE V IR + + ++K
Sbjct: 493 ACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKP 552
Query: 481 AGCSLIQL 488
+G S ++L
Sbjct: 553 SGASSVEL 560
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/486 (36%), Positives = 278/486 (57%), Gaps = 26/486 (5%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + QI QIH H L KGL C+ILT ++ +T DP YA +
Sbjct: 59 CINLNQIKQIHGHVLRKGLD--QSCYILTKLIRTLTKL-------GVPMDP--YARRVIE 107
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSL 129
+ + + F + +IR + + A+ ++ MR I P ++F LL+AC + +L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+ H+Q +L C V+V N+++ +Y + A+++FDE+ RDV+S LI Y +
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G++ A +LF+ +P +D V+W +V G+AQ+ + +EA++ F M I+ D + +
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDS-----FLSTGLVDFYAKCGYINTAIEIFESS 304
+SACA+LG K R +++ Q S + + L+D Y+KCG + A+ +F S
Sbjct: 288 ISACAQLG---ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEA 363
KN+FT+++M++GLA HG + +L F M+ + IKP+ VT +GAL+ CSH+GLVD+
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM---PMGGDVFVWSGLLG 420
R++FD M +GV HY CM DLLGR G ++EALE+IK M P GG VW LLG
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGG---VWGALLG 461
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIH N EIAE AAEH+ +L+P+ G Y +L++VYA+A W V+++R+ + +KK
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 481 AGCSLI 486
S +
Sbjct: 522 PAVSWV 527
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 265/474 (55%), Gaps = 13/474 (2%)
Query: 17 HQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPST 76
H I H L L +S H + ++A + + A +F+ P
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFA-------------SCGDMENARKVFDESPVRDL 222
Query: 77 FSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQ 136
S+N +I + A+ ++ M + + PD + L+ +CS L + + +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 137 VLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHA 196
V + G + ++N+LM ++ + +A+ +FD + R +VS T+I GY + G L +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 197 RQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARL 256
R+LFD M +D V W ++ G Q+ + ++A+ LF M + KPD I ++ LSAC++L
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 257 GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAML 316
G L+ G IHRYIE + ++ L T LVD YAKCG I+ A+ +F Q +N T+ A++
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 317 VGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGV 376
GLA+HG ++ YF+ MI+A I PD +T +G L C H G++ R F +M+S + +
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 377 SKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAE 436
+ +LKHY M DLLGRAGL+EEA +++ MPM D VW LL GCR+HGNVE+ E AA+
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 582
Query: 437 HVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+++L P D G+Y +L +Y A+ WED + RR ++ ++K GCS I++NG
Sbjct: 583 KLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNG 636
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 206/461 (44%), Gaps = 78/461 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ +++CK + + QI A + GL IL + + I+ + + L Y+
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGL-----------ILDPFASSRLIAFCALSESRYLDYS 106
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRT---VSIPPDFYSFPFLLRAC 121
+ I I P+ FS+N IR + +P + +L+ QM PD +++P L + C
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ L SL I VLKL V N+ +H++ + +A+++FDE RD+VS N
Sbjct: 167 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
LI+GY K G + E+AI ++ M +KP
Sbjct: 227 CLINGYKKIG-------------------------------EAEKAIYVYKLMESEGVKP 255
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
D++ ++ +S+C+ LG+L +GK + Y++ N +R+ L L+D ++KCG I+ A IF
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 302 ESSQEKNLFTWNAMLVGLAMHGL-------------------------------GRLSLV 330
++ +++ + +W M+ G A GL G+ +L
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F M + KPD +T++ L CS G +D + +E Y +S + + D+
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMY 434
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G I EAL + + + ++ ++GG +HG+ A
Sbjct: 435 AKCGNISEALSVFHGIQT-RNSLTYTAIIGGLALHGDASTA 474
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 322 bits (826), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 276/481 (57%), Gaps = 13/481 (2%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
T K++ QIHA G L H++ + A+ L YA I +
Sbjct: 18 TFKEVRQIHAKLYVDGTL--KDDHLVGHFVKAVAL---------SDHKYLDYANQILDRS 66
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV--SIPPDFYSFPFLLRACSQLCSHSL 129
P+ F+ N++IRAH P + + ++ + + PD Y+ FL++AC+ L
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+H ++ GF D V L+ +Y L ++F+ I D V ++ +
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD+ AR+LF+ MP RD ++W +++GYAQ + EA+ +F M +K + +A++S
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSAC +LG L+QG+ H YIE N+I++ L+T LVD YAKCG + A+E+F +EKN+
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
+TW++ L GLAM+G G L FS M + + P+ VT + L GCS G VDE ++ FD
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 370 MESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVE 429
M + +G+ +L+HYGC+ DL RAG +E+A+ +I++MPM VWS LL R++ N+E
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Query: 430 IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ A++ +++L+ + G Y +L+++YA+++ W++V +R+S+ + ++K GCS++++N
Sbjct: 427 LGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 486
Query: 490 G 490
G
Sbjct: 487 G 487
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 321 bits (823), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 277/487 (56%), Gaps = 10/487 (2%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYA--ITTFKPISSASSPTTDPLSY 63
++ C + + IH FL H+++ + A + S + T+ L Y
Sbjct: 18 LLQSCSSFSDLKIIHG--------FLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGY 69
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A IF+ I P+ F +N +IR + + P A ++QM I PD +FPFL++A S+
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ + + HSQ+++ GF DV+V NSL+H+Y + A +F ++ +RDVVS ++
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+ GY K G + +AR++FD MP R+ +W ++ GYA+++ E+AI LF M + +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+VS +S+CA LG LE G+ + Y+ + + V+ L T LVD + +CG I AI +FE
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
E + +W++++ GLA+HG ++ YFS+MI P VT L CSH GLV++
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++++ M+ +G+ L+HYGC+ D+LGRAG + EA I KM + + + LLG C+
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
I+ N E+AE ++K+KPE G Y +L+++YA A +W+ + +R + +KK G
Sbjct: 430 IYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGW 489
Query: 484 SLIQLNG 490
SLI+++G
Sbjct: 490 SLIEIDG 496
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 321 bits (822), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 280/485 (57%), Gaps = 15/485 (3%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+CK++ ++++IH +T GL P + +F +SS+ + YA
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEP------FVSQTLSFSALSSSGD-----VDYAYKFL 65
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+ + P + +N +IR + +P ++ ++ QM + PD ++PFL+++ S+L +
Sbjct: 66 SKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRK 125
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
L ++H V+K G D+F+ N+L+H+Y F A++LFDE+ ++++V+ N+++D Y
Sbjct: 126 LGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYA 185
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DIKPDNIALV 247
K+GD+ AR +FD M RD V+W +++ GY + + +A+++F MM + K + + +V
Sbjct: 186 KSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMV 245
Query: 248 SALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF--ESSQ 305
S + ACA LG L +GK +HRYI + + L T L+D YAKCG I A +F S +
Sbjct: 246 SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E + WNA++ GLA HG R SL F +M E++I PD +T L L CSH GLV EA
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH 365
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F ++ G + +HY CM D+L RAGL+++A + I +MP+ + LL GC H
Sbjct: 366 FFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINH 424
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
GN+E+AE + +++L+P + G Y LA+VYA ++ +R +++ +KK AG S+
Sbjct: 425 GNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 484
Query: 486 IQLNG 490
+ L+G
Sbjct: 485 LDLDG 489
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 254/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ FS+N +I + ++ L +M + P + +L A
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS++ L + +H V + + + N+L++ Y + A +F + RDV+S
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 305
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+++ GYV+ G+L AR FD+MP RD +SW ++ GY ++ E++++F M +
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +VS L+ACA LG LE G+ I YI+ N+I+ D + L+D Y KCG A ++
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
F +++ FTW AM+VGLA +G G+ ++ F +M + I+PD +T LG L C+H+G+V
Sbjct: 426 FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMV 485
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ARK F +M S + + L HYGCM D+LGRAGL++EA E+++KMPM + VW LLG
Sbjct: 486 DQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLG 545
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
R+H + +AE AA+ +++L+P++G VY +L ++YA RW+D+ ++RR + IKK
Sbjct: 546 ASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKT 605
Query: 481 AGCSLIQLNG 490
G SLI++NG
Sbjct: 606 PGFSLIEVNG 615
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 197/467 (42%), Gaps = 83/467 (17%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CKT Q Q+H+ +T+G+ +P L+ S +SYA +F
Sbjct: 44 CKTTDQFKQLHSQSITRGV---APNPTFQKKLFVFWC--------SRLGGHVSYAYKLFV 92
Query: 70 NIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSH-S 128
IP P +N +I+ + V L+ M + PD ++FPFLL + +
Sbjct: 93 KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+ +H V+K G +++V N+L+ +Y + + A+ +FD DV S N +I GY
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY- 211
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+RM + EE+I+L M + P ++ L+
Sbjct: 212 ------------NRM------------------KEYEESIELLVEMERNLVSPTSVTLLL 241
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
LSAC+++ + + K +H Y+ + L LV+ YA CG ++ A+ IF S + ++
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLF 367
+ +W +++ G G +L+ YF +M + RI TI+ + G AG +E+ ++F
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRI---SWTIM--IDGYLRAGCFNESLEIF 356
Query: 368 DEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
EM+S AG+I + M+ +L C G+
Sbjct: 357 REMQS--------------------AGMIPDEFTMV-------------SVLTACAHLGS 383
Query: 428 VEIAEAAAEHVMKLK-PEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+EI E ++ K K D V L D+Y E K+ +D
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD 430
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 132/287 (45%), Gaps = 6/287 (2%)
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
G +++A +LF ++P D V W ++ G+++ D E ++L+ NM+ + PD+
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 250 LSACARL-GELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN 308
L+ R G L GK +H ++ + + ++ LV Y+ CG ++ A +F+ +++
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 309 LFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+F+WN M+ G S+ M + P VT+L L CS D +++
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH- 259
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
E S L+ + + G ++ A+ + + M DV W+ ++ G GN+
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNL 318
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
++A + ++ D + ++ D Y A + + ++I R + +
Sbjct: 319 KLART---YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 262/431 (60%), Gaps = 1/431 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A +F I S+N++I SP A+ LF +M + + + +L A
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+++ + + + S + + ++ + N+++ +Y + DA+ LFD + +D V+
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDI 239
T++DGY + D AR++ + MP +D V+W L++ Y Q+ + EA+ +F + + ++
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
K + I LVS LSACA++G LE G+ IH YI+ + IR++ +++ L+ Y+KCG + + E
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F S +++++F W+AM+ GLAMHG G ++ F +M EA +KP+GVT CSH GL
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLL 419
VDEA LF +MES YG+ E KHY C+ D+LGR+G +E+A++ I+ MP+ VW LL
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 420 GGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
G C+IH N+ +AE A +++L+P + G + +L+++YA +WE+V ++R+ + +KK
Sbjct: 542 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 601
Query: 480 NAGCSLIQLNG 490
GCS I+++G
Sbjct: 602 EPGCSSIEIDG 612
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 221/455 (48%), Gaps = 77/455 (16%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I+RC +++Q+ Q H H + G F P + L+A+ +S L YA
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGT-FSDP--YSASKLFAMAALSSFAS--------LEYA 83
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQ 123
+F+ IP P++F++NT+IRA+ P+ ++ F M + S P+ Y+FPFL++A ++
Sbjct: 84 RKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAE 143
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S SL Q++H +K DVFV NSL+H Y L A ++F I +DVVS N++
Sbjct: 144 VSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 203
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I+G+V+ G ++A++LF M D+K +
Sbjct: 204 INGFVQKGSP-------------------------------DKALELFKKMESEDVKASH 232
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ +V LSACA++ LE G+ + YIE N++ V+ L+ ++D Y KCG I A +F++
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 304 SQEKNLFTWNAMLVGLAM-------------------------------HGLGRLSLVYF 332
+EK+ TW ML G A+ +G +L+ F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 333 SRM-IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
+ ++ +K + +T++ L C+ G ++ R + ++ +G+ + +
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYS 411
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ G +E++ E+ + DVFVWS ++GG +HG
Sbjct: 412 KCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 282/483 (58%), Gaps = 14/483 (2%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIF 68
+C T++++ QIHA + GL I +T + ++ + +D ++YA +F
Sbjct: 34 QCSTMRELKQIHASLIKTGL-----------ISDTVTASRVLAFCCASPSD-MNYAYLVF 81
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM--RTVSIPPDFYSFPFLLRACSQLCS 126
I + + F +NTIIR + S P A+ +F M + S+ P ++P + +A +L
Sbjct: 82 TRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
+ +H V+K G D F+ N+++H+Y L +A +F ++ DVV+ N++I G
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
+ K G + A+ LFD MP R+ VSW ++++G+ ++ + ++A+ +F M + D+KPD +
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQE 306
VS L+ACA LG EQG+ IH YI N+ ++S + T L+D Y KCG I + +FE + +
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 307 KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKL 366
K L WN+M++GLA +G ++ FS + + ++PD V+ +G L C+H+G V A +
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 367 FDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
F M+ Y + +KHY M ++LG AGL+EEA +IK MP+ D +WS LL CR G
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Query: 427 NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
NVE+A+ AA+ + KL P++ Y +L++ YA+ +E+ V+ R + +++K GCS I
Sbjct: 442 NVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Query: 487 QLN 489
+++
Sbjct: 502 EVD 504
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 255/426 (59%), Gaps = 2/426 (0%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L YA +F++ TF YN +I+A+ + P ++VL++ + + P ++F F+ A
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
+ S + +HSQ + GF D F +L+ Y L A+ +FDE+ RDV
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 151
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLF-CNMMDLDI 239
N +I GY + GD+ A +LFD MP ++ SW T+++G++Q+ EA+++F C D +
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KP++I +VS L ACA LGELE G+ + Y N + ++ ++ Y+KCG I+ A
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+FE ++NL +WN+M+ LA HG +L F++M+ KPD VT +G L+ C H G
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V + ++LF ME V+ +S +L+HYGCM DLLGR G ++EA ++IK MPM D VW L
Sbjct: 332 MVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 391
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
LG C HGNVEIAE A+E + KL+P + G +++++YA ++W+ V+++R+ + +
Sbjct: 392 LGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMT 451
Query: 479 KNAGCS 484
K AG S
Sbjct: 452 KAAGYS 457
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 120/278 (43%), Gaps = 55/278 (19%)
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKP--------- 241
+L +AR+LFD + L+ Y Q E+I L+ N++ D ++P
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIF 89
Query: 242 --------------------------DNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
D+ + ++A A+LG L + + + +
Sbjct: 90 AASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP 149
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
V + + TG Y + G + A+E+F+S KN+ +W ++ G + +G +L F M
Sbjct: 150 VWNAMITG----YQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCM 205
Query: 336 IEAR-IKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH----YGCMA--D 388
+ + +KP+ +T++ L C++ G ++ R+L G ++E Y C A +
Sbjct: 206 EKDKSVKPNHITVVSVLPACANLGELEIGRRL-------EGYARENGFFDNIYVCNATIE 258
Query: 389 LLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHG 426
+ + G+I+ A + +++ ++ W+ ++G HG
Sbjct: 259 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 313 bits (801), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 273/520 (52%), Gaps = 47/520 (9%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPL 61
L IK+C T K + A + L C ++ + A T+FK L
Sbjct: 30 NLKKIIKQCSTPKLLESALAAMIKTSLN--QDCRLMNQFITACTSFKR-----------L 76
Query: 62 SYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
A+S + P+ F YN + + S P+ ++ L+ +M S+ P Y++ L++A
Sbjct: 77 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 136
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV--- 178
S + +++ + + K GF V + +L+ Y R+R+A+++FDE+ RD +
Sbjct: 137 S--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWT 194
Query: 179 ----------------------------SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVS 210
+ N LI+GY+ G+L A LF++MP +D +S
Sbjct: 195 TMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIIS 254
Query: 211 WGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE 270
W T++ GY+Q+ + EAI +F MM+ I PD + + + +SACA LG LE GK +H Y
Sbjct: 255 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 314
Query: 271 LNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLV 330
N +D ++ + LVD Y+KCG + A+ +F + +KNLF WN+++ GLA HG + +L
Sbjct: 315 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALK 374
Query: 331 YFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLL 390
F++M +KP+ VT + C+HAGLVDE R+++ M Y + ++HYG M L
Sbjct: 375 MFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 434
Query: 391 GRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYK 450
+AGLI EALE+I M + +W LL GCRIH N+ IAE A +M L+P + G Y
Sbjct: 435 SKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF 494
Query: 451 VLADVYANADRWEDVVKIR-RSLDAGKIKKNAGCSLIQLN 489
+L +YA +RW DV +IR R + G K G S I+++
Sbjct: 495 LLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 534
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 274/517 (52%), Gaps = 44/517 (8%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CK ++ + QIH F+ G+ T Y T K I + +D L YA
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGV---------DTDSY--FTGKLILHCAISISDALPYA 58
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQ 123
+ P P F +NT++R ++ P N+V +F +M R + PD +SF F+++A
Sbjct: 59 RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 118
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVY----CV-FHR----------------- 161
S +H Q LK G +FV +L+ +Y CV F R
Sbjct: 119 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 162 ---------LRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWG 212
+ A+E+FD++L R+ S N ++ GY+KAG+L A+++F MP RD VSW
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 238
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
T++ G A + E+ F + + P+ ++L LSAC++ G E GK +H ++E
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 273 QIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKN-LFTWNAMLVGLAMHGLGRLSLVY 331
++ L+D Y++CG + A +FE QEK + +W +M+ GLAMHG G ++
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
F+ M + PDG++ + L CSHAGL++E F EM+ VY + E++HYGCM DL G
Sbjct: 359 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 418
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKV 451
R+G +++A + I +MP+ VW LLG C HGN+E+AE + + +L P + G +
Sbjct: 419 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 478
Query: 452 LADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
L++ YA A +W+DV IR+S+ +IKK SL+++
Sbjct: 479 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 308 bits (788), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 162/426 (38%), Positives = 249/426 (58%), Gaps = 12/426 (2%)
Query: 76 TFSYNTIIRA--HTLFSSPL--NAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
+F +N IIRA H + SSP + + ++ +MR + PDF++FPFLL + L Q
Sbjct: 24 SFLWNIIIRAIVHNV-SSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
H+Q+L G D FV SL+++Y LR AQ +FD+ +D+ + N++++ Y KAG
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-----DLDIKPDNIAL 246
+ AR+LFD MP R+ +SW L+ GY + +EA+ LF M + ++P+ +
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 247 VSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES-SQ 305
+ LSAC RLG LEQGK +H YI+ + +D L T L+D YAKCG + A +F +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEA-RIKPDGVTILGALVGCSHAGLVDEAR 364
+K++ ++AM+ LAM+GL FS M + I P+ VT +G L C H GL++E +
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
F M +G++ ++HYGCM DL GR+GLI+EA I MPM DV +W LL G R+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
G+++ E A + +++L P + G Y +L++VYA RW +V IR ++ I K GCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 485 LIQLNG 490
+++ G
Sbjct: 443 YVEVEG 448
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 305 bits (781), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 274/485 (56%), Gaps = 16/485 (3%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I + +++ ++ QIHA L LL +L L+ + + + ++L
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHR----------AYASHGKIRHSL 84
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
++F+ P F + I ++ A +L+ Q+ + I P+ ++F LL++CS
Sbjct: 85 ALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS 144
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH+ VLK G D +V L+ VY + AQ++FD + R +VS +I
Sbjct: 145 ----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNI 244
Y K G++ AR LFD M RD VSW ++ GYAQ +A+ LF ++ + KPD I
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ALSAC+++G LE G+ IH +++ ++IR++ + TGL+D Y+KCG + A+ +F +
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDEA 363
K++ WNAM+ G AMHG + +L F+ M ++P +T +G L C+HAGLV+E
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
++F+ M YG+ +++HYGC+ LLGRAG ++ A E IK M M D +WS +LG C+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+HG+ + + AE+++ L ++ G+Y +L+++YA+ +E V K+R + I K G
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 484 SLIQL 488
S I++
Sbjct: 501 STIEI 505
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 304 bits (779), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 256/430 (59%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
++YA ++F+ + + ++NT+I + F A LF +M+ ++ PD ++ A
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C + + + I+ +++ D +L +L+ +Y + A+E F ++ R++
Sbjct: 222 CGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
++ GY K G L A+ +FD+ +D V W T+++ Y +SD +EA+++F M IK
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD +++ S +SACA LG L++ K +H I +N + + ++ L++ YAKCG ++ ++
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE +N+ +W++M+ L+MHG +L F+RM + ++P+ VT +G L GCSH+GLV
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
+E +K+F M Y ++ +L+HYGCM DL GRA L+ EALE+I+ MP+ +V +W L+
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 421 GCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
CRIHG +E+ + AA+ +++L+P+ G +++++YA RWEDV IRR ++ + K
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 481 AGCSLIQLNG 490
G S I NG
Sbjct: 582 KGLSRIDQNG 591
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 212/454 (46%), Gaps = 78/454 (17%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
CK++ I Q+HAH L T I + + +F + + S ++ LSYAL++F+
Sbjct: 22 CKSLNHIKQLHAHILR------------TVINHKLNSF-LFNLSVSSSSINLSYALNVFS 68
Query: 70 NIPY-PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
+IP P + +N +R + S P ++ + ++R V D +SF +L+A S++ +
Sbjct: 69 SIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 128
Query: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188
+H K+ +CD FV M +Y R+ A+ +FDE+ +RDVV+ NT+I+ Y
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 189 KAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVS 248
+ G LV +EA +LF M D ++ PD + L +
Sbjct: 189 RFG----------------------LV---------DEAFKLFEEMKDSNVMPDEMILCN 217
Query: 249 ALSACARLGELEQGKNIHRYIELNQIRVDS------------------------------ 278
+SAC R G + + I+ ++ N +R+D+
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277
Query: 279 -FLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
F+ST +V Y+KCG ++ A IF+ +++K+L W M+ + +L F M
Sbjct: 278 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
+ IKPD V++ + C++ G++D+A+ + + V G+ EL + ++ + G ++
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIH-VNGLESELSINNALINMYAKCGGLD 396
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
++ +KMP +V WS ++ +HG A
Sbjct: 397 ATRDVFEKMPR-RNVVSWSSMINALSMHGEASDA 429
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 269/480 (56%), Gaps = 43/480 (8%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
+I ++ QIHA + G+ +S + +++ + + P+ P+SYA +F+ I
Sbjct: 29 SITKLRQIHAFSIRHGV-SISDAELGKHLIFYLVSL--------PSPPPMSYAHKVFSKI 79
Query: 72 PYP-STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLCSHSL 129
P + F +NT+IR + + ++A L+ +MR + PD +++PFL++A + + L
Sbjct: 80 EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRL 139
Query: 130 AQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK 189
+TIHS V++ GF ++V NSL+H+Y
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYA-------------------------------N 168
Query: 190 AGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSA 249
GD+A A ++FD+MP +D V+W +++ G+A++ + EEA+ L+ M IKPD +VS
Sbjct: 169 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228
Query: 250 LSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNL 309
LSACA++G L GK +H Y+ + + S L+D YA+CG + A +F+ +KN
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIEAR-IKPDGVTILGALVGCSHAGLVDEARKLFD 368
+W +++VGLA++G G+ ++ F M + P +T +G L CSH G+V E + F
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M Y + ++H+GCM DLL RAG +++A E IK MPM +V +W LLG C +HG+
Sbjct: 349 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 408
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQL 488
++AE A +++L+P G Y +L+++YA+ RW DV KIR+ + +KK G SL+++
Sbjct: 409 DLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 468
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 242/397 (60%), Gaps = 1/397 (0%)
Query: 95 AVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMH 154
A+ +F+ M + PD S + +CSQL + ++ H VL+ GF + N+L+
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 155 VYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTL 214
+Y HR A +FD + + VV+ N+++ GYV+ G++ A + F+ MP ++ VSW T+
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 215 VAGYAQSDQCEEAIQLFCNMMDLD-IKPDNIALVSALSACARLGELEQGKNIHRYIELNQ 273
++G Q EEAI++FC+M + + D + ++S SAC LG L+ K I+ YIE N
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 274 IRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
I++D L T LVD +++CG +A+ IF S +++ W A + +AM G ++ F
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 334 RMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRA 393
MIE +KPDGV +GAL CSH GLV + +++F M ++GVS E HYGCM DLLGRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 394 GLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLA 453
GL+EEA+++I+ MPM + +W+ LL CR+ GNVE+A AAE + L PE G Y +L+
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 454 DVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
+VYA+A RW D+ K+R S+ ++K G S IQ+ G
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 179/352 (50%), Gaps = 43/352 (12%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
+K CKTI ++ H +GL + ++TI + S T + LS+A
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLD-----NDVSTITKLVA-----RSCELGTRESLSFAKE 88
Query: 67 IF-NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F N+ Y + F YN++IR + A++LF +M I PD Y+FPF L AC++
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ IH ++K+G+ D+FV NSL+H Y L A+++FDE+ R+VVS ++I
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI- 207
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM-DLDIKPDNI 244
GYA+ D ++A+ LF M+ D ++ P+++
Sbjct: 208 ------------------------------CGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V +SACA+L +LE G+ ++ +I + I V+ + + LVD Y KC I+ A +F+
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
NL NAM GL R +L F+ M+++ ++PD +++L A+ CS
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACS 122
A F +P + S+NTII S A+ +F M++ + D + + AC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 123 QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + LA+ I+ + K G DV RL T
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDV--------------RLG-----------------TT 510
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
L+D + + GD A +F+ + RD +W + A + E AI+LF +M++ +KPD
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 243 NIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+A V AL+AC+ G ++QGK I + ++L+ + + +VD + G + A+++
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 302 ES-SQEKNLFTWNAMLVGLAMHG 323
E E N WN++L + G
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQG 653
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 42/165 (25%)
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGY---INTAIEIF 301
A S+L C + EL K HR + + D T LV + G ++ A E+F
Sbjct: 34 ATPSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVF 90
Query: 302 ESSQE-KNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD----------------- 343
E+S+ F +N+++ G A GL +++ F RM+ + I PD
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 344 --GVTILGALVGCSHA----------------GLVDEARKLFDEM 370
G+ I G +V +A G +D ARK+FDEM
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEM 195
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 299 bits (765), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 275/502 (54%), Gaps = 28/502 (5%)
Query: 3 LNNFIK----RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTT 58
LN FI + + + + Q+ + + GL S H L L T + +
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGL---SHSHFLCFKLLRFCTLRLCN------- 72
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV---SIP-PDFYSF 114
LSYA IF+ +P+T Y ++ A++ S PL+A FS R + S+P P+ + +
Sbjct: 73 --LSYARFIFDRFSFPNTHLYAAVLTAYSS-SLPLHASSAFSFFRLMVNRSVPRPNHFIY 129
Query: 115 PFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC--VFHRLRDAQELFDEI 172
P +L++ L S +H+ + K GF V V +L+H Y V H + A++LFDE+
Sbjct: 130 PLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSH-ITLARQLFDEM 188
Query: 173 LYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFC 232
R+VVS ++ GY ++GD+++A LF+ MP RD SW ++A Q+ EA+ LF
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 233 NMM-DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC 291
M+ + I+P+ + +V LSACA+ G L+ K IH + + D F+S LVD Y KC
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC 308
Query: 292 GYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARI---KPDGVTIL 348
G + A +F+ + +K+L WN+M+ A+HG ++ F M++ I KPD +T +
Sbjct: 309 GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
Query: 349 GALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPM 408
G L C+H GLV + R FD M + +G+ ++HYGC+ DLLGRAG +EALE++ M M
Sbjct: 369 GLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKM 428
Query: 409 GGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKI 468
D +W LL C+IHG++++AE A ++++ L P +GG ++A++Y WE+ +
Sbjct: 429 KADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRA 488
Query: 469 RRSLDAGKIKKNAGCSLIQLNG 490
R+ + K G S I+++
Sbjct: 489 RKMIKHQNAYKPPGWSRIEIDN 510
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 243/434 (55%), Gaps = 7/434 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ + + S+N++I + A+ +F M + PD + ++ AC+
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACAS 265
Query: 124 LCSHSLAQTIHSQVLKLGFI-CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNT 182
L + + Q +H +V+K + D+ + N+ + +Y R+++A+ +FD + R+V++ +
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 183 LIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPD 242
+I GY A AR +F +M R+ VSW L+AGY Q+ + EEA+ LFC + + P
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDS------FLSTGLVDFYAKCGYINT 296
+ + + L ACA L EL G H ++ + + S F+ L+D Y KCG +
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
+F E++ +WNAM++G A +G G +L F M+E+ KPD +T++G L C H
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGH 505
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
AG V+E R F M +GV+ HY CM DLLGRAG +EEA MI++MPM D +W
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LL C++H N+ + + AE +++++P + G Y +L+++YA +WEDV+ +R+S+
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEG 625
Query: 477 IKKNAGCSLIQLNG 490
+ K GCS I++ G
Sbjct: 626 VTKQPGCSWIKIQG 639
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 158/301 (52%), Gaps = 3/301 (0%)
Query: 110 DFYSFPFLLRAC--SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQE 167
D F LL +C S+L S + +H+ V+K GF ++F+ N L+ Y L D ++
Sbjct: 18 DSSPFAKLLDSCIKSKL-SAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 168 LFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEA 227
+FD++ R++ + N+++ G K G L A LF MP RD +W ++V+G+AQ D+CEEA
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 228 IQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDF 287
+ F M + + S LSAC+ L ++ +G +H I + D ++ + LVD
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 288 YAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTI 347
Y+KCG +N A +F+ ++N+ +WN+++ +G +L F M+E+R++PD VT+
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 348 LGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMP 407
+ C+ + +++ + + ++ D+ + I+EA + MP
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 408 M 408
+
Sbjct: 317 I 317
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 36/308 (11%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L A S+F ++P ++N+++ A+ F+ M + YSF +L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
CS L + +HS + K F+ DV++ ++L+ +Y + DAQ +FDE+ R+VVS
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
N+LI + + G EA+ +F M++ ++
Sbjct: 222 NSLITCFEQNGPAV-------------------------------EALDVFQMMLESRVE 250
Query: 241 PDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
PD + L S +SACA L ++ G+ +H R ++ +++R D LS VD YAKC I A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
IF+S +N+ +M+ G AM + + + F++M E + V+ + G + G
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGE 366
Query: 360 VDEARKLF 367
+EA LF
Sbjct: 367 NEEALSLF 374
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 267 RYIELNQIRV----DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMH 322
RY+ + I+ + F+ L+D Y+KCG + ++F+ ++N++TWN+++ GL
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 323 GLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH 382
G + F M E D T + G + +EA F M V L
Sbjct: 100 GFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV---LNE 152
Query: 383 YGCMADLLGRAGLIE-----EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAE 432
Y + L +GL + + +I K P DV++ S L+ GNV A+
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQ 207
>sp|O80488|PPR23_ARATH Pentatricopeptide repeat-containing protein At1g09190
OS=Arabidopsis thaliana GN=PCMP-E70 PE=2 SV=1
Length = 484
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/478 (33%), Positives = 264/478 (55%), Gaps = 17/478 (3%)
Query: 12 TIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNI 71
T ++ +IHAH L FL ++L +I S +D YA +F++I
Sbjct: 16 TRTRLPEIHAHLLRH---FLHGSNLLLAHFISIC-------GSLSNSD---YANRVFSHI 62
Query: 72 PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQ 131
P+ +N +I+ ++L PL ++ FS M++ I D Y++ LL++CS L +
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 132 TIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAG 191
+H ++++ GF + ++ +Y R+ DAQ++FDE+ R+VV N +I G+ +G
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 192 DLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALS 251
D+ LF +M R VSW ++++ ++ + EA++LFC M+D PD +V+ L
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 252 ACARLGELEQGKNIHRYIELNQIRVDSFLSTG--LVDFYAKCGYINTAIEIFESSQEKNL 309
A LG L+ GK IH E + + D F++ G LVDFY K G + A IF Q +N+
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGLFKD-FITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMIE-ARIKPDGVTILGALVGCSHAGLVDEARKLFD 368
+WN ++ G A++G G + F MIE ++ P+ T LG L CS+ G V+ +LF
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 369 EMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNV 428
M + + +HYG M DL+ R+G I EA + +K MP+ + +W LL CR HG+V
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Query: 429 EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLI 486
++AE AA ++K++P + G Y +L+++YA RW+DV K+R + +++K+ G S I
Sbjct: 422 KLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 265/488 (54%), Gaps = 21/488 (4%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSP--CHILTTILYAITTFKPISSASSPTTDPLSY 63
+K + ++ QIH H + G L L + L + F
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNF--------------GV 184
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P+P S+N +I + L A+ L+ +M + I PD Y+ LL C
Sbjct: 185 AEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Query: 124 LCSHSLAQTIHSQVLKLG--FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
L L + +H + + G + ++ + N+L+ +Y A+ FD + +D+ S N
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI-QLFCNMMDLD-I 239
T++ G+V+ GD+ A+ +FD+MP RD VSW +L+ GY++ + + +LF M ++ +
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKV 364
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD + +VS +S A GEL G+ +H + Q++ D+FLS+ L+D Y KCG I A
Sbjct: 365 KPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFM 424
Query: 300 IFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGL 359
+F+++ EK++ W +M+ GLA HG G+ +L F RM E + P+ VT+L L CSH+GL
Sbjct: 425 VFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGL 484
Query: 360 VDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMI-KKMPMGGDVFVWSGL 418
V+E +F+ M+ +G E +HYG + DLL RAG +EEA +++ KKMPM +W +
Sbjct: 485 VEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSI 544
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L CR ++E AE A ++KL+PE G Y +L+++YA RW K R +++ +K
Sbjct: 545 LSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVK 604
Query: 479 KNAGCSLI 486
K AG S +
Sbjct: 605 KTAGYSSV 612
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 191/468 (40%), Gaps = 96/468 (20%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
++ C + Q Q+ A + L+ C + ++ S+ + P L+ L
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLI----CDT-----FPMSRLIFFSAITYPENLDLAKLL 90
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
N P P+ F YNT+I A + SS L+S M + PD +F +L++A S L
Sbjct: 91 -FLNFTPNPNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFL- 146
Query: 126 SHSLAQTIHSQVLKLGFIC-DVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
S + IH ++ G + ++ NSL+ Y A+++F + + DV S N +I
Sbjct: 147 --SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMI 204
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY K G F EA++L+ M+ I+PD
Sbjct: 205 VGYAKQG--------FSL-----------------------EALKLYFKMVSDGIEPDEY 233
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDS--FLSTGLVDFYAKCGYINTAIEIFE 302
++S L C L ++ GK +H +IE S LS L+D Y KC A F+
Sbjct: 234 TVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFD 293
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM--------------------------- 335
+ ++K++ +WN M+VG G + F +M
Sbjct: 294 AMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRE 353
Query: 336 ------IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYG----- 384
I ++KPD VT++ + G ++ G + R V+G+ L+ G
Sbjct: 354 LFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR-------WVHGLVIRLQLKGDAFLS 406
Query: 385 -CMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ D+ + G+IE A M+ K DV +W+ ++ G HGN + A
Sbjct: 407 SALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 146/330 (44%), Gaps = 47/330 (14%)
Query: 117 LLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
LL C+ S + + + +Q+++ ICD F ++ L+ F I Y +
Sbjct: 40 LLENCN---SRNQFKQVLAQIMRFNLICDTFPMSRLI--------------FFSAITYPE 82
Query: 177 VVSCNTLIDGYVKAGDLAHARQLF-DRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
+L A+ LF + P + + T+++ + S E L+ +M+
Sbjct: 83 ---------------NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMI 125
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYI 294
+ PD + + A + L E++Q IH +I ++ + + ++L LV FY + G
Sbjct: 126 RHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNF 182
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
A ++F ++ ++N M+VG A G +L + +M+ I+PD T+L LV C
Sbjct: 183 GVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCC 242
Query: 355 SHAGLVDEARKLFDEMESVYGV-SKELKHYGCMADLLGR---AGLIEEALEMIKKMPMGG 410
H + + + +E V S L + D+ + +GL + A + +KK
Sbjct: 243 GHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK----K 298
Query: 411 DVFVWSGLLGGCRIHGNVEIAEAAAEHVMK 440
D+ W+ ++ G G++E A+A + + K
Sbjct: 299 DMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 260/486 (53%), Gaps = 41/486 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
+KRC I + Q+HA F+ L + S + + A S + ++YA
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVL---------AKCAHSGWENSMNYAA 86
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
SIF I P TF +NT+IR + S A+ +++M PD +++P LL+AC++L
Sbjct: 87 SIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLK 146
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
S + IH QV KLG DVFV NS LI+
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNS-------------------------------LIN 175
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNM-MDLDIKPDNI 244
Y + G++ + +F+++ + A SW ++V+ A E + LF M + ++K +
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+VSAL ACA G L G +IH ++ N ++ + T LVD Y KCG ++ A+ IF+
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
+++N T++AM+ GLA+HG G +L FS+MI+ ++PD V + L CSH+GLV E R
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGR 355
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
++F EM V +HYGC+ DLLGRAGL+EEALE I+ +P+ + +W L CR+
Sbjct: 356 RVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRV 415
Query: 425 HGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
N+E+ + AA+ ++KL + G Y +++++Y+ W+DV + R + +K+ G S
Sbjct: 416 RQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Query: 485 LIQLNG 490
+++L G
Sbjct: 476 IVELKG 481
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 255/485 (52%), Gaps = 42/485 (8%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
I +C +++++ QI A+ + + +S + + F SPT +SYA
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVS-------FVAKLINF----CTESPTESSMSYAR 83
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+F + P +N++ R ++ F++PL LF ++ I PD Y+FP LL+AC+
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + +H +KLG +V+V C TLI+
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYV-------------------------------CPTLIN 172
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
Y + D+ AR +FDR+ V + ++ GYA+ ++ EA+ LF M +KP+ I
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
L+S LS+CA LG L+ GK IH+Y + + ++T L+D +AKCG ++ A+ IFE +
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
K+ W+AM+V A HG S++ F RM ++PD +T LG L CSH G V+E RK
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F +M S +G+ +KHYG M DLL RAG +E+A E I K+P+ +W LL C H
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSH 412
Query: 426 GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSL 485
N+++AE +E + +L GG Y +L+++YA +WE V +R+ + K K GCS
Sbjct: 413 NNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSS 472
Query: 486 IQLNG 490
I++N
Sbjct: 473 IEVNN 477
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 127/325 (39%), Gaps = 45/325 (13%)
Query: 2 TLNNFIKRCKTIKQIHQ-IHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
T + +K C K + + H L+ L ++ T++ T + + SA
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARC----- 185
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+F+ I P YN +I + + P A+ LF +M+ + P+ + +L +
Sbjct: 186 ------VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS 239
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ L S L + IH K F V V +L+ ++ L DA +F+++ Y+D +
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW 299
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
+ +I Y G + E+++ +F M +++
Sbjct: 300 SAMIVAYANHG-------------------------------KAEKSMLMFERMRSENVQ 328
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG-LVDFYAKCGYINTAIE 299
PD I + L+AC+ G +E+G+ + V S G +VD ++ G + A E
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 300 IFES-SQEKNLFTWNAMLVGLAMHG 323
+ W +L + H
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHN 413
>sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protein At5g19020,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2
SV=1
Length = 685
Score = 288 bits (738), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/418 (38%), Positives = 240/418 (57%), Gaps = 8/418 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ A +F+ I S+ T+I + A+V +++M + P LL A
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 314
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
++ S +H ++K GF C F+ +++H Y V + ++ A + F+ + + S
Sbjct: 315 SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL-DI 239
N LI G+VK G + AR++FD+ +D SW +++GYAQS + A+ LF M+ +
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 240 KPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIE 299
KPD I +VS SA + LG LE+GK H Y+ + I + L+ ++D YAKCG I TA+
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 300 IFESSQEKNLFT-----WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
IF Q KN+ + WNA++ G A HG +L+L +S + IKP+ +T +G L C
Sbjct: 495 IFH--QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
HAGLV+ + F+ M+S +G+ ++KHYGCM DLLG+AG +EEA EMIKKMP+ DV +
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSL 472
W LL R HGNVEIAE AA + + P GG +L++VYA+A RWEDV +R +
Sbjct: 613 WGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEM 670
Score = 178 bits (451), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 199/402 (49%), Gaps = 35/402 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
AL +F+ +P S SY T+I+ + + A+ LF +MR + I + + ++ ACS
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + + S +KL VFV +L+H+YC+ L+DA++LFDE+ R++V+ N +
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
++GY KAG + A +LFD++ +D VSWGT++ G + +Q +EA+ + M+ +KP
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYA-------------- 289
+ +V LSA AR +G +H I FL ++ FYA
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 290 -----------------KCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYF 332
K G + A E+F+ + +K++F+WNAM+ G A +L+L F
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 333 SRMI-EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG 391
MI +++KPD +T++ S G ++E ++ D + + + + D+
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAIIDMYA 484
Query: 392 RAGLIEEALEMI--KKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
+ G IE AL + K + W+ ++ G HG+ ++A
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 4/253 (1%)
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L +C+ + + IH +VLK G + ++ NS++++Y L DA+ +F + D
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
S N ++DGYV++ L A +LFD MP R VS+ TL+ GYAQ++Q EA++LF M +L
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
I + + L + +SAC+ LG + + + ++ F+ST L+ Y C + A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
++F+ E+NL TWN ML G + GL + F ++ E I G I GC
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI----DGCLRK 283
Query: 358 GLVDEARKLFDEM 370
+DEA + EM
Sbjct: 284 NQLDEALVYYTEM 296
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 72/244 (29%)
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKC------------- 291
ALVSAL +CA ++ G+ IH + + + + ++ +++ YAKC
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 292 -------------GYINT-----AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFS 333
GY+ + A+++F+ E++ ++ ++ G A + ++ F
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 334 RMIEARIKPDGVTILGALVGCSHAG----------------------------------- 358
M I + VT+ + CSH G
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+ +ARKLFDEM + L + M + +AGLIE+A E+ ++ D+ W +
Sbjct: 223 CLKDARKLFDEMP-----ERNLVTWNVMLNGYSKAGLIEQAEELFDQIT-EKDIVSWGTM 276
Query: 419 LGGC 422
+ GC
Sbjct: 277 IDGC 280
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 266/488 (54%), Gaps = 18/488 (3%)
Query: 7 IKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALS 66
I R + + + ++H + + GL F S +YA + +
Sbjct: 56 IGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYA-------------SLGKIEITHK 102
Query: 67 IFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFLLRACSQLC 125
+F+ +P S+N +I ++ +A+ +F +M S + D + L ACS L
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + + I+ V+ F V + N+L+ ++C L A+ +FD + ++V +++
Sbjct: 163 NLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GYV G + AR LF+R P +D V W ++ GY Q ++ +EA++LF M I+PDN
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
LVS L+ CA+ G LEQGK IH YI N++ VD + T LVD YAKCG I TA+E+F +
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
E++ +W +++ GLAM+G+ +L + M ++ D +T + L C+H G V E RK
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGD---VFVWSGLLGGC 422
+F M + V + +H C+ DLL RAGL++EA E+I KM D V V+ LL
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAA 461
Query: 423 RIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAG 482
R +GNV+IAE AE + K++ D + +LA VYA+A+RWEDV +RR + I+K G
Sbjct: 462 RNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPG 521
Query: 483 CSLIQLNG 490
CS I+++G
Sbjct: 522 CSSIEIDG 529
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 66/385 (17%)
Query: 74 PSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTI 133
PS YN ++++ S + LF ++R + PD ++ P +L++ +L + +
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 134 HSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDL 193
H +K G D +V NSLM +Y ++ ++FDE+ RDVVS N LI YV G
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 194 AHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSAC 253
A +F RM + ++K D +VS LSAC
Sbjct: 129 EDAIGVFKRMS------------------------------QESNLKFDEGTIVSTLSAC 158
Query: 254 ARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWN 313
+ L LE G+ I+R++ + + + + LVD + KCG ++ A +F+S ++KN+ W
Sbjct: 159 SALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWT 217
Query: 314 AMLVGLAMHGLGRLSLVYFSR-------------------------------MIEARIKP 342
+M+ G G + V F R M A I+P
Sbjct: 218 SMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRP 277
Query: 343 DGVTILGALVGCSHAGLVDEARKLFDEM-ESVYGVSKELKHYGCMADLLGRAGLIEEALE 401
D ++ L GC+ G +++ + + + E+ V K + + D+ + G IE ALE
Sbjct: 278 DNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT--ALVDMYAKCGCIETALE 335
Query: 402 MIKKMPMGGDVFVWSGLLGGCRIHG 426
+ ++ D W+ L+ G ++G
Sbjct: 336 VFYEIKE-RDTASWTSLIYGLAMNG 359
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 270/492 (54%), Gaps = 23/492 (4%)
Query: 2 TLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTI--LYAITTFKPISSASSPTTD 59
TL + ++ CK I + IHA I+ T A F+ I S T D
Sbjct: 31 TLISVLRSCKNIAHVPSIHAK-------------IIRTFHDQDAFVVFELIRVCS--TLD 75
Query: 60 PLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119
+ YA +F+ + P+ + Y +I + V L+ +M S+ PD Y +L+
Sbjct: 76 SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLK 135
Query: 120 ACS-QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
AC ++C + IH+QVLKLGF V +M +Y L +A+++FDE+ RD V
Sbjct: 136 ACDLKVC-----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
+ +I+ Y + G + A +LF + +D V W ++ G ++ + +A++LF M +
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
+ + V LSAC+ LG LE G+ +H ++E ++ + +F+ L++ Y++CG IN A
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F ++K++ ++N M+ GLAMHG ++ F M+ +P+ VT++ L CSH G
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 370
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
L+D ++F+ M+ V+ V +++HYGC+ DLLGR G +EEA I+ +P+ D + L
Sbjct: 371 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 430
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+IHGN+E+ E A+ + + + D G Y +L+++YA++ +W++ +IR S+ I+
Sbjct: 431 LSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
Query: 479 KNAGCSLIQLNG 490
K GCS I+++
Sbjct: 491 KEPGCSTIEVDN 502
>sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protein At3g28660
OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1
Length = 504
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 264/493 (53%), Gaps = 50/493 (10%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+RC T+KQI H+ F+ GL H T YAI+ YA SI
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGL------HRNT---YAISKLLTAFLHLPNLNKHFHYASSI 69
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSP---LNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
F++I P++F Y+T+IR + S P L +L + I P + +F FL+ AC +
Sbjct: 70 FDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKA 129
Query: 125 CSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
C S+ + IH V+K G F+ D V ++ +Y + + LFD
Sbjct: 130 CFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYV------EDKLLFD------------- 170
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
AR++FD +P D V W L+ GY + E +++F M+ I+PD
Sbjct: 171 ------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDE 218
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++ +AL+ACA++G L QGK IH +++ + I D F+ T LVD YAKCG I TA+E+FE
Sbjct: 219 FSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE 278
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVD 361
+N+F+W A++ G A +G + + R+ E IKPD V +LG L C+H G ++
Sbjct: 279 KLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E R + + ME+ YG++ + +HY C+ DL+ RAG +++AL++I+KMPM VW LL G
Sbjct: 339 EGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Query: 422 CRIHGNVEIAEAAAEHVMKLKP----EDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
CR H NVE+ E A ++++ L+ E+ L+++Y + R + K+R ++ I
Sbjct: 399 CRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGI 458
Query: 478 KKNAGCSLIQLNG 490
+K G SL++++G
Sbjct: 459 RKTPGWSLLEVDG 471
>sp|Q9FG85|PP415_ARATH Pentatricopeptide repeat-containing protein At5g43790
OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1
Length = 460
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 264/491 (53%), Gaps = 52/491 (10%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
N I +CK+++ + QIHA +T GL + Y ++ +SS T LSYA
Sbjct: 14 NLISKCKSLQNLKQIHAQIITIGL---------SHHTYPLSKLLHLSS-----TVCLSYA 59
Query: 65 LSIFNNIPYPSTFSYNTIIRA----HTLFSSPLNAVVLFSQM---RTVSIPPDFYSFPFL 117
LSI IP PS F YNT+I + H + L A L+ Q+ R+ + P+ +++P L
Sbjct: 60 LSILRQIPNPSVFLYNTLISSIVSNHNSTQTHL-AFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 118 LRACS-QLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD 176
+A H + +H+ VLK F E + D
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLK-----------------------------FLEPVNHD 149
Query: 177 VVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMD 236
L+ Y G L AR LF+R+ D +W TL+A YA S++ + ++ M
Sbjct: 150 RFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMR 209
Query: 237 LDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+ ++P+ ++LV+ + +CA LGE +G H Y+ N + ++ F+ T L+D Y+KCG ++
Sbjct: 210 MQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSF 269
Query: 297 AIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSH 356
A ++F+ ++++ +NAM+ GLA+HG G+ + + +I + PD T + + CSH
Sbjct: 270 ARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSH 329
Query: 357 AGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWS 416
+GLVDE ++F+ M++VYG+ +++HYGC+ DLLGR+G +EEA E IKKMP+ + +W
Sbjct: 330 SGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWR 389
Query: 417 GLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGK 476
LG + HG+ E E A +H++ L+ E+ G Y +L+++YA +RW DV K R + +
Sbjct: 390 SFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHR 449
Query: 477 IKKNAGCSLIQ 487
+ K+ G S +
Sbjct: 450 VNKSPGISTLN 460
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 284 bits (727), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 173/503 (34%), Positives = 266/503 (52%), Gaps = 55/503 (10%)
Query: 9 RCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSA-----SSPTTDPLSY 63
+ K K+ QIH H L G ++ T+++ + A SP D +SY
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDL--DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 64 ---------------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIP 108
A +F+ IP S+N +I + + A+ LF M ++
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 109 PDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQEL 168
PD + ++ AC+Q S L + +H + GF ++ ++N+L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL---------------- 307
Query: 169 FDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAI 228
ID Y K G+L A LF+R+P++D +SW TL+ GY + +EA+
Sbjct: 308 ---------------IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 229 QLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIE--LNQIRVDSFLSTGLVD 286
LF M+ P+++ ++S L ACA LG ++ G+ IH YI+ L + S L T L+D
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 287 FYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVT 346
YAKCG I A ++F S K+L +WNAM+ G AMHG S FSRM + I+PD +T
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 347 ILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKM 406
+G L CSH+G++D R +F M Y ++ +L+HYGCM DLLG +GL +EA EMI M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532
Query: 407 PMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVV 466
M D +W LL C++HGNVE+ E+ AE+++K++PE+ G Y +L+++YA+A RW +V
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 467 KIRRSLDAGKIKKNAGCSLIQLN 489
K R L+ +KK GCS I+++
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEID 615
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 238/426 (55%), Gaps = 12/426 (2%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ + CKT++ + IHA + GL H L + F +S P + L YA
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGL------HNTNYALSKLIEFCILS----PHFEGLPYA 87
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
+S+F I P+ +NT+ R H L S P++A+ L+ M ++ + P+ Y+FPF+L++C++
Sbjct: 88 ISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKS 147
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLI 184
+ Q IH VLKLG D++V SL+ +Y RL DA ++FD+ +RDVVS LI
Sbjct: 148 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207
Query: 185 DGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNI 244
GY G + +A++LFD +P +D VSW +++GYA++ +EA++LF +MM +++PD
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 245 ALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS 304
+V+ +SACA+ G +E G+ +H +I+ + + + L+D Y+KCG + TA +FE
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 305 QEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEAR 364
K++ +WN ++ G L + +L+ F M+ + P+ VT+L L C+H G +D R
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Query: 365 KLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
+ ++ + GV+ + D+ + G IE A ++ + + + W+ ++ G
Sbjct: 388 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFA 446
Query: 424 IHGNVE 429
+HG +
Sbjct: 447 MHGRAD 452
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 264/512 (51%), Gaps = 27/512 (5%)
Query: 3 LNNFIKRC---KTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAI--TTFKPISS----- 52
L + +++C K++KQ IH H G F P +L+ L + KPI +
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITG--FKRPNTLLSNHLIGMYMKCGKPIDACKVFD 106
Query: 53 --------------ASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVL 98
+ + L A +F+++P S+NT++ + + A+
Sbjct: 107 QMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 99 FSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCV 158
+ + R I + +SF LL AC + L + H QVL GF+ +V + S++ Y
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 159 FHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGY 218
++ A+ FDE+ +D+ TLI GY K GD+ A +LF MP ++ VSW L+AGY
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 219 AQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS 278
+ A+ LF M+ L +KP+ S L A A + L GK IH Y+ +R ++
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 279 FLSTGLVDFYAKCGYINTAIEIFESSQEK-NLFTWNAMLVGLAMHGLGRLSLVYFSRMIE 337
+ + L+D Y+K G + + +F +K + WN M+ LA HGLG +L MI+
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 338 ARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIE 397
R++P+ T++ L CSH+GLV+E + F+ M +G+ + +HY C+ DLLGRAG +
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 398 EALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYA 457
E + I++MP D +W+ +LG CRIHGN E+ + AA+ ++KL PE Y +L+ +YA
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYA 526
Query: 458 NADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
+ +WE V K+R + ++ K S I++
Sbjct: 527 DHGKWELVEKLRGVMKKRRVNKEKAVSWIEIE 558
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 213 TLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELN 272
+ ++ +A + +A+ ++ I+ L S L C L+QGK IHR++++
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 273 QI-RVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVY 331
R ++ LS L+ Y KCG A ++F+ +NL++WN M+ G G+ + V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 332 FSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDE 369
F M E D V+ ++G + G + EA + E
Sbjct: 136 FDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKE 169
>sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730
OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1
Length = 501
Score = 282 bits (722), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/489 (34%), Positives = 263/489 (53%), Gaps = 48/489 (9%)
Query: 6 FIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYAL 65
F+K C +IK + QIH G + LS L + I+ +SS S + L
Sbjct: 19 FLKLCSSIKHLLQIH------GQIHLSS---LQNDSFIISELVRVSSLSLAKDLAFARTL 69
Query: 66 SIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLC 125
+ ++ PST +N + R ++ SP+ ++ ++S+M+ I P+ +FPFLL+AC+
Sbjct: 70 LLHSSDSTPST--WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFL 127
Query: 126 SHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
+ + I +VLK GF DV+V N+L+H+Y + DA+++FDE+ R+VVS N+++
Sbjct: 128 GLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMT 187
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
V+ G L LV + FC M+ PD
Sbjct: 188 ALVENGKL-------------------NLV------------FECFCEMIGKRFCPDETT 216
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+V LSAC G L GK +H + + ++ ++ L T LVD YAK G + A +FE
Sbjct: 217 MVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMV 274
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGCSHAGLVDEAR 364
+KN++TW+AM+VGLA +G +L FS+M+ E+ ++P+ VT LG L CSH GLVD+
Sbjct: 275 DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
Query: 365 KLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRI 424
K F EME ++ + + HYG M D+LGRAG + EA + IKKMP D VW LL C I
Sbjct: 335 KYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSI 394
Query: 425 HGNVE---IAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNA 481
H + + I E + +++L+P+ G ++A+ +A A W + ++RR + K+KK A
Sbjct: 395 HHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIA 454
Query: 482 GCSLIQLNG 490
G S ++L G
Sbjct: 455 GESCLELGG 463
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 262/497 (52%), Gaps = 58/497 (11%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
+ I++C + QI Q+ +HFLT G H ++ L + + A SP D LS
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAG-------HFQSSFLRSRLLER---CAISPFGD-LS 54
Query: 63 YALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPP------DFYSFPF 116
+A+ IF IP P T +N IIR S P A + M S D + F
Sbjct: 55 FAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSF 114
Query: 117 LLRACSQ-LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYR 175
L+AC++ LCS ++ Q +H Q+ + G D +
Sbjct: 115 TLKACARALCSSAMDQ-LHCQINRRGLSADSLL--------------------------- 146
Query: 176 DVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMM 235
C TL+D Y K GDL A +LFD MP RD SW L+AG ++ EA++L+ M
Sbjct: 147 ----CTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYI 294
I+ + +V+AL AC+ LG++++G+NI H Y N I +S +D Y+KCG++
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFV 257
Query: 295 NTAIEIFES-SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVG 353
+ A ++FE + +K++ TWN M+ G A+HG +L F ++ + IKPD V+ L AL
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Query: 354 CSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVF 413
C HAGLV+ +F+ M + GV + +KHYGC+ DLL RAG + EA ++I M M D
Sbjct: 318 CRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 414 VWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLD 473
+W LLG I+ +VE+AE A+ + ++ + G + +L++VYA RW+DV ++R ++
Sbjct: 377 LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDME 436
Query: 474 AGKIKKNAGCSLIQLNG 490
+ ++KK G S I+ G
Sbjct: 437 SKQVKKIPGLSYIEAKG 453
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 234/425 (55%), Gaps = 8/425 (1%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A F+++ S+NTII + A LF + S D +++ ++ Q
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQ 293
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
A+ + ++ + + N+++ Y R+ A+ELFD + R+V + NT+
Sbjct: 294 NRMVEEARELFDKMPERNEVS----WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I GY + G ++ A+ LFD+MP RD VSW ++AGY+QS EA++LF M + +
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
+ SALS CA + LE GK +H + F+ L+ Y KCG I A ++F+
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEA 363
K++ +WN M+ G + HG G ++L +F M +KPD T++ L CSH GLVD+
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 364 RKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCR 423
R+ F M YGV +HY CM DLLGRAGL+E+A ++K MP D +W LLG R
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 424 IHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGC 483
+HGN E+AE AA+ + ++PE+ G+Y +L+++YA++ RW DV K+R + +KK G
Sbjct: 590 VHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGY 649
Query: 484 SLIQL 488
S I++
Sbjct: 650 SWIEI 654
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 187/424 (44%), Gaps = 53/424 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+N +I+ + + A LF M D S+ +L +Q
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQ 169
Query: 124 LCSHSLAQTIHSQV-----LKLGFICDVFVLNSLMHVYCVFHRLRD-------------- 164
A+++ ++ + + +V NS M C+ + R+
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 165 --------AQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVA 216
A++ FD + RDVVS NT+I GY ++G + ARQLFD P +D +W +V+
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 217 GYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRV 276
GY Q+ EEA +LF M + + ++ + L+ + +E K + + +
Sbjct: 290 GYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 277 DSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMI 336
+ + TG YA+CG I+ A +F+ +++ +W AM+ G + G +L F +M
Sbjct: 346 WNTMITG----YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 337 EARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMAD-----LLG 391
+ + + AL C+ ++ ++L + K GC +
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRL------VKGGYETGCFVGNALLLMYC 455
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMK--LKPEDGGVY 449
+ G IEEA ++ K+M G D+ W+ ++ G HG E+A E + + LKP+D +
Sbjct: 456 KCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 450 KVLA 453
VL+
Sbjct: 515 AVLS 518
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 29/304 (9%)
Query: 127 HSLAQTIHSQV--------LKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
HSL + +Q+ LK G D+ N + Y R +A +F + V
Sbjct: 38 HSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV 96
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S N +I GY++ G+ AR+LFD MP RD VSW ++ GY ++ +A +LF M + D
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD 156
Query: 239 IKPDNIALVSALSACARLGELEQGKNI-HRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ N + LS A+ G ++ +++ R E N + ++ LS Y + + A
Sbjct: 157 VCSWN----TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA-----YVQNSKMEEA 207
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F+S + L +WN +L G + + +V + ++ D V+ + G + +
Sbjct: 208 CMLFKSRENWALVSWNCLLGGF----VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSG 417
G +DEAR+LFDE +++ + M + ++EEA E+ KMP +V W+
Sbjct: 264 GKIDEARQLFDE-----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV-SWNA 317
Query: 418 LLGG 421
+L G
Sbjct: 318 MLAG 321
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 140/327 (42%), Gaps = 41/327 (12%)
Query: 24 LTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTII 83
+ K L + PC ++T IT + +S A ++F+ +P S+ +I
Sbjct: 330 MAKELFDVMPCRNVSTWNTMITGYAQCGK--------ISEAKNLFDKMPKRDPVSWAAMI 381
Query: 84 RAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFI 143
++ A+ LF QM + SF L C+ + + L + +H +++K G+
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 144 CDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRM 203
FV N+L+ +YC + +A +LF E+ +D+VS NT+I
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI------------------- 482
Query: 204 PFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGK 263
AGY++ E A++ F +M +KPD+ +V+ LSAC+ G +++G+
Sbjct: 483 ------------AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 264 N-IHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ-EKNLFTWNAMLVGLAM 321
+ + + +S +VD + G + A + ++ E + W +L +
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590
Query: 322 HGLGRLSLVYFSRMIEARIKPDGVTIL 348
HG L+ ++ + G+ +L
Sbjct: 591 HGNTELAETAADKIFAMEPENSGMYVL 617
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 245/432 (56%), Gaps = 34/432 (7%)
Query: 61 LSYALSIFNNIPYP--STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLL 118
L A ++F +P P + S+ I+ A+ P+ A+ +FSQMR + + PD+ + +L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 119 RACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
A + L ++IH+ V+K+G EI ++
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGL----------------------------EIEPDLLI 261
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD 238
S NT+ Y K G +A A+ LFD+M + + W +++GYA++ EAI +F M++ D
Sbjct: 262 SLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 239 IKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAI 298
++PD I++ SA+SACA++G LEQ ++++ Y+ + R D F+S+ L+D +AKCG + A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 299 EIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAG 358
+F+ + ++++ W+AM+VG +HG R ++ + M + P+ VT LG L+ C+H+G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 359 LVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGL 418
+V E F+ M + ++ + +HY C+ DLLGRAG +++A E+IK MP+ V VW L
Sbjct: 439 MVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 419 LGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIK 478
L C+ H +VE+ E AA+ + + P + G Y L+++YA A W+ V ++R + +
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 479 KNAGCSLIQLNG 490
K+ GCS +++ G
Sbjct: 558 KDVGCSWVEVRG 569
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 218/420 (51%), Gaps = 50/420 (11%)
Query: 15 QIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIPYP 74
Q+ QIHA L GL F ++T +++A ++F I+ +A +F+++P P
Sbjct: 36 QLKQIHARLLVLGLQFSG--FLITKLIHASSSFGDIT-----------FARQVFDDLPRP 82
Query: 75 STFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIH 134
F +N IIR ++ + +A++++S M+ + PD ++FP LL+ACS L + + +H
Sbjct: 83 QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 135 SQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLA 194
+QV +LGF DVFV N L+ +Y R L
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRR-------------------------------LG 171
Query: 195 HARQLFDRMPF--RDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSA 252
AR +F+ +P R VSW +V+ YAQ+ + EA+++F M +D+KPD +ALVS L+A
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 253 CARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTW 312
L +L+QG++IH + + ++ L L YAKCG + TA +F+ + NL W
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 313 NAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEM-E 371
NAM+ G A +G R ++ F MI ++PD ++I A+ C+ G +++AR +++ +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 372 SVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
S Y ++ + D+ + G +E A ++ + DV VWS ++ G +HG A
Sbjct: 352 SDY--RDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
>sp|Q9LJJ1|PP259_ARATH Putative pentatricopeptide repeat-containing protein At3g28640
OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1
Length = 504
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 261/493 (52%), Gaps = 50/493 (10%)
Query: 8 KRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSI 67
+RC T+KQI H+ F+ GL H T YAI+ YA SI
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGL------HRNT---YAISKLLTAFLHLPNLNKHFHYASSI 69
Query: 68 FNNIPYPSTFSYNTIIRAHTLFSSP---LNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
F++I P++F Y+T+IR + S P L +L + I P + +F FL+ AC +
Sbjct: 70 FDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKA 129
Query: 125 CSHSLAQTIHSQVLKLG-FICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
C S+ + IH V+K G F+ D V ++ +Y V L
Sbjct: 130 CFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIY---------------------VEDKLL 168
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
+D AR++FD +P D V W L+ GY + E +++F M+ ++PD
Sbjct: 169 LD----------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDE 218
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQ-IRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
++ +AL+ACA++G L QGK IH +++ I D F+ T LVD YAKCG I TA+E+F+
Sbjct: 219 FSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFK 278
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLVD 361
+N+F+W A++ G A +G + ++ R+ E IKPD V +LG L C+H G ++
Sbjct: 279 KLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
E R + + ME+ Y ++ + +HY C+ DL+ RAG +++AL +I+KMPM VW LL G
Sbjct: 339 EGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Query: 422 CRIHGNVEIAEAAAEHVMKLKP----EDGGVYKVLADVYANADRWEDVVKIRRSLDAGKI 477
CR H NVE+ E A ++++ L+ E+ L+++Y + R + K+R ++ +
Sbjct: 399 CRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGV 458
Query: 478 KKNAGCSLIQLNG 490
+K G S+++++G
Sbjct: 459 RKTPGWSVLEVDG 471
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 264/497 (53%), Gaps = 59/497 (11%)
Query: 10 CKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFN 69
C + Q+ Q+HA L P T LY I SS +D ++YA +F+
Sbjct: 58 CSDMSQLKQLHAFTLRTTY----PEEPATLFLYG-----KILQLSSSFSD-VNYAFRVFD 107
Query: 70 NIPYPSTFSYNTIIRA--HTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLRACSQLCS 126
+I S+F +NT+IRA H + S A +L+ +M PD ++FPF+L+AC+ +
Sbjct: 108 SIENHSSFMWNTLIRACAHDV-SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 127 HSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDG 186
S + +H Q++K GF DV+V N L+H+Y SC L
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYG---------------------SCGCL--- 202
Query: 187 YVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIAL 246
DLA R++FD MP R VSW +++ + + + A+QLF M +PD +
Sbjct: 203 -----DLA--RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF-REMQRSFEPDGYTM 254
Query: 247 VSALSACARLGELEQGKNIHRYIELN---QIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
S LSACA LG L G H ++ + +D + L++ Y KCG + A ++F+
Sbjct: 255 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 314
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEAR--IKPDGVTILGALVGCSHAGLVD 361
Q+++L +WNAM++G A HG ++ +F RM++ R ++P+ VT +G L+ C+H G V+
Sbjct: 315 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 374
Query: 362 EARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
+ R+ FD M Y + L+HYGC+ DL+ RAG I EA++M+ MPM D +W LL
Sbjct: 375 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Query: 422 CRIHG-NVEIAEAAAEHVMKLKPED-------GGVYKVLADVYANADRWEDVVKIRRSLD 473
C G +VE++E A +++ K ++ G Y +L+ VYA+A RW DV +R+ +
Sbjct: 435 CCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMS 494
Query: 474 AGKIKKNAGCSLIQLNG 490
I+K GCS I++NG
Sbjct: 495 EHGIRKEPGCSSIEING 511
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 273/552 (49%), Gaps = 80/552 (14%)
Query: 1 MTLNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDP 60
++L K CK+ ++QIHA + KGL S+SS ++
Sbjct: 11 LSLETLFKLCKSEIHLNQIHARIIRKGLE------------QDQNLISIFISSSSSSSSS 58
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHT---LFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
LSY+ S+F +P P T+ +N +I+ ++ LF ++ +L MRT PD Y+FP +
Sbjct: 59 LSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVS--ILMRMMRTGLARPDEYTFPLV 116
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNS-------------------------- 151
++ CS + ++H VL++GF DV V S
Sbjct: 117 MKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNA 176
Query: 152 -----LMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFR 206
L+ Y L +A+ +FD + R++ S N L+DG VK+GDL +A++LFD MP R
Sbjct: 177 VSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR 236
Query: 207 DAVS-------------------------------WGTLVAGYAQSDQCEEAIQLFCNMM 235
D +S W L+ GYAQ+ Q EA ++F M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 236 DLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDS-FLSTGLVDFYAKCGYI 294
++KPD +V +SAC+++G E + + Y+ + S ++ L+D AKCG++
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 295 NTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGC 354
+ A ++FE +++L ++ +M+ G+A+HG G ++ F +M++ I PD V L C
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVC 416
Query: 355 SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFV 414
+ LV+E + F+ M Y + HY C+ +LL R G ++EA E+IK MP
Sbjct: 417 GQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA 476
Query: 415 WSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDA 474
W LLGGC +HGN EIAE A H+ +L+P+ G Y +L+++YA DRW DV +R ++
Sbjct: 477 WGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNE 536
Query: 475 GKIKKNAGCSLI 486
I K G S I
Sbjct: 537 NGITKICGRSWI 548
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 275 bits (702), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 237/425 (55%), Gaps = 4/425 (0%)
Query: 69 NNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHS 128
N +T S+ + I T A FS M + P+ +F LL C S S
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 129 --LAQTIHSQVLKLGFICD-VFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLID 185
L +H KLG + V V +++ +Y R + A+ +FD + ++ V+ NT+ID
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 186 GYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIA 245
GY+++G + +A ++FD+MP RD +SW ++ G+ + EEA+ F M +KPD +A
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 246 LVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQ 305
+++AL+AC LG L G +HRY+ + + +S L+D Y +CG + A ++F + +
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 306 EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARK 365
++ + +WN+++VG A +G SLVYF +M E KPD VT GAL CSH GLV+E +
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 366 LFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIH 425
F M+ Y +S ++HYGC+ DL RAG +E+AL++++ MPM + V LL C H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 426 G-NVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCS 484
G N+ +AE +H+ L + Y +L+++YA +WE K+RR + +KK G S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 485 LIQLN 489
I+++
Sbjct: 449 SIEID 453
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 43/267 (16%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+ +P S+ +I A++ F +M+ + PD+ + L AC+
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L + S +H VL F +V V NSL+ +YC + A+++F + R VVS N++
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSV 278
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
I G+ G+ AH E++ F M + KPD
Sbjct: 279 IVGFAANGN-AH------------------------------ESLVYFRKMQEKGFKPDA 307
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTG------LVDFYAKCGYINTA 297
+ AL+AC+ +G +E+G RY ++ ++ D +S LVD Y++ G + A
Sbjct: 308 VTFTGALTACSHVGLVEEGL---RYFQI--MKCDYRISPRIEHYGCLVDLYSRAGRLEDA 362
Query: 298 IEIFESSQEK-NLFTWNAMLVGLAMHG 323
+++ +S K N ++L + HG
Sbjct: 363 LKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 39/215 (18%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
+ +A +F N+ + S+N++I + ++V F +M+ PD +F L A
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTA 316
Query: 121 CSQ--LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVV 178
CS L L + Q++K CD + + H C
Sbjct: 317 CSHVGLVEEGLR---YFQIMK----CDYRISPRIEHYGC--------------------- 348
Query: 179 SCNTLIDGYVKAGDLAHARQLFDRMPFR-DAVSWGTLVAGYA-QSDQCEEAIQLFCNMMD 236
L+D Y +AG L A +L MP + + V G+L+A + + A +L ++ D
Sbjct: 349 ----LVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTD 404
Query: 237 LDIKP-DNIALVSALSACARLGELEQGKNIHRYIE 270
L++K N ++S + A G+ E + R ++
Sbjct: 405 LNVKSHSNYVILSNMYAAD--GKWEGASKMRRKMK 437
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 231/429 (53%), Gaps = 13/429 (3%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRA 120
L+ A +F+ + S+N II AH + LF M I PD ++F +L+A
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 121 CSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSC 180
C+ S IHS ++K G + V SL+ +Y + +A+++ R VS
Sbjct: 493 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS- 550
Query: 181 NTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIK 240
G + ++ ++ VSW ++++GY +Q E+A LF MM++ I
Sbjct: 551 ----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 241 PDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEI 300
PD + L CA L GK IH + +++ D ++ + LVD Y+KCG ++ + +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 301 FESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLV 360
FE S ++ TWNAM+ G A HG G ++ F RMI IKP+ VT + L C+H GL+
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D+ + F M+ YG+ +L HY M D+LG++G ++ ALE+I++MP D +W LLG
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Query: 421 GCRIH-GNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKK 479
C IH NVE+AE A +++L P+D Y +L++VYA+A WE V +RR++ K+KK
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 840
Query: 480 NAGCSLIQL 488
GCS ++L
Sbjct: 841 EPGCSWVEL 849
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 98 LFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYC 157
+Q+ +VS +F F+ + C++ + L + H+ ++ GF FVLN L+ VY
Sbjct: 39 FLNQVNSVSTT----NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYT 94
Query: 158 VFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAG 217
A +FD++ RDVVS N +I+GY K+ D+ A F+ MP RD VSW ++++G
Sbjct: 95 NSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSG 154
Query: 218 YAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVD 277
Y Q+ + ++I++F +M I+ D L C+ L + G IH + D
Sbjct: 155 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 214
Query: 278 SFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
++ L+D YAK ++ +F+ EKN +W+A++ G + L L+L +F M
Sbjct: 215 VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 272
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 180/433 (41%), Gaps = 63/433 (14%)
Query: 18 QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASS-----PTTDPLSY--------- 63
Q HAH + G F +L +L T + SAS P D +S+
Sbjct: 69 QAHAHMIISG--FRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSK 126
Query: 64 ------ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFL 117
A S FN +P S+N+++ + L ++ +F M I D +F +
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L+ CS L SL IH V+++G CD DV
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVG--CDT-----------------------------DV 215
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
V+ + L+D Y K + ++F +P +++VSW ++AG Q++ A++ F M +
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA 297
+ S L +CA L EL G +H + + D + T +D YAKC + A
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 335
Query: 298 IEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA 357
+F++S+ N ++NAM+ G + G +L+ F R++ + + D +++ G C+
Sbjct: 336 QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV 395
Query: 358 GLVDEARKLFDEMESVYGVSKELKHYGCMA----DLLGRAGLIEEALEMIKKMPMGGDVF 413
+ E +++ + L C+A D+ G+ + EA + +M D
Sbjct: 396 KGLSEGLQIYG-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAV 449
Query: 414 VWSGLLGGCRIHG 426
W+ ++ +G
Sbjct: 450 SWNAIIAAHEQNG 462
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 181/452 (40%), Gaps = 78/452 (17%)
Query: 7 IKRCKTIKQIH---QIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63
++ C + ++ Q+HAH L T +YA D +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA-------------KCDNMQD 334
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F+N + SYN +I ++ A++LF ++ + + D S + RAC+
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ S I+ +K DV V N+ + +Y L +A +FDE+ RD
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD------- 447
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
AVSW ++A + Q+ + E + LF +M+ I+PD
Sbjct: 448 ------------------------AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTA------ 297
S L AC G L G IH I + + +S + L+D Y+KCG I A
Sbjct: 484 FTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 298 ----------IEIFESSQEKNL----FTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD 343
+E E K L +WN+++ G M + + F+RM+E I PD
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 344 GVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKH--YGC--MADLLGRAGLIEEA 399
T L C++ +++ ++ + KEL+ Y C + D+ + G + ++
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQV-----IKKELQSDVYICSTLVDMYSKCGDLHDS 657
Query: 400 LEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIA 431
M +K + D W+ ++ G HG E A
Sbjct: 658 RLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 688
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 145/341 (42%), Gaps = 43/341 (12%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
+L +F IP ++ S++ II + A+ F +M+ V+ + +LR+C+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
L L +H+ LK F D +V TL
Sbjct: 294 LSELRLGGQLHAHALKSDFAAD------------------------------GIVRTATL 323
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDN 243
D Y K ++ A+ LFD + S+ ++ GY+Q + +A+ LF +M + D
Sbjct: 324 -DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 244 IALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFES 303
I+L ACA + L +G I+ + + +D ++ +D Y KC + A +F+
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 304 SQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHA----GL 359
+ ++ +WNA++ +G G +L F M+ +RI+PD T L C+ G+
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGM 502
Query: 360 VDEARKLFDEMESVYGVSKELKHYGC-MADLLGRAGLIEEA 399
+ + M S V GC + D+ + G+IEEA
Sbjct: 503 EIHSSIVKSGMASNSSV-------GCSLIDMYSKCGMIEEA 536
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 263/521 (50%), Gaps = 49/521 (9%)
Query: 5 NFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYA 64
+ I CK + +HA L +G+L + + S SS P Y+
Sbjct: 34 SLIHACKDTASLRHVHAQILRRGVL-------------SSRVAAQLVSCSSLLKSP-DYS 79
Query: 65 LSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQL 124
LSIF N + F N +IR T + ++V F M + + PD +FPF+L++ S+L
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL 139
Query: 125 CSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDE------------- 171
L + +H+ LK CD FV SL+ +Y +L+ A ++F+E
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 172 -----------------ILYRDVVSCN-----TLIDGYVKAGDLAHARQLFDRMPFRDAV 209
L+R + N TLI GYV +G+L A+QLF+ MP ++ V
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
SW TL+ G++Q+ E AI + M++ +KP+ + + LSAC++ G L G IH YI
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSL 329
N I++D + T LVD YAKCG ++ A +F + K++ +W AM+ G A+HG ++
Sbjct: 320 LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAI 379
Query: 330 VYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADL 389
F +M+ + KPD V L L C ++ VD FD M Y + LKHY + DL
Sbjct: 380 QCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDL 439
Query: 390 LGRAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVY 449
LGRAG + EA E+++ MP+ D+ W+ L C+ H AE+ ++++++L PE G Y
Sbjct: 440 LGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSY 499
Query: 450 KVLADVYANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLNG 490
L +A+ +DV K R SL +++ G S I+L+G
Sbjct: 500 IFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDG 540
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 168/386 (43%), Gaps = 74/386 (19%)
Query: 90 SSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVL 149
SSP A + F R S PD F L+ AC S + +H+Q+L+ G VL
Sbjct: 12 SSP--AKIYFPADRQAS--PDESHFISLIHACKDTAS---LRHVHAQILRRG------VL 58
Query: 150 NSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAV 209
+S R A +L VSC++L+ K+ D ++ +F R+
Sbjct: 59 SS-----------RVAAQL---------VSCSSLL----KSPD--YSLSIFRNSEERNPF 92
Query: 210 SWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYI 269
L+ G ++ + E +++ F M+ L +KPD + L + ++LG G+ +H
Sbjct: 93 VLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAAT 152
Query: 270 ELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFESS----QEKNLFTWNAMLVGLAMHGLG 325
N + DSF+ LVD YAK G + A ++FE S +++++ WN ++ G
Sbjct: 153 LKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDM 212
Query: 326 RLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGC 385
++ F M E R T++ V +G ++ A++LF+ M K + +
Sbjct: 213 HMATTLFRSMPE-RNSGSWSTLIKGYVD---SGELNRAKQLFELMP-----EKNVVSWTT 263
Query: 386 MADLLGRAGLIEEAL----EMIKKMPMGGDVFVW--------SGLLG-GCRIHGNVEIAE 432
+ + + G E A+ EM++K + + SG LG G RIHG +
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI---- 319
Query: 433 AAAEHVMKLKPEDGGVYKVLADVYAN 458
++ +KL D + L D+YA
Sbjct: 320 --LDNGIKL---DRAIGTALVDMYAK 340
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 259/514 (50%), Gaps = 50/514 (9%)
Query: 13 IKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLSYALSIFNNIP 72
I+ + +H+ + + L S + ++ A + K ++SA +F+ IP
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGV--KLMRAYASLKDVASARK-----------VFDEIP 101
Query: 73 YPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQLCSHSLAQT 132
+ N +IR++ V +F M ++ PD Y+FP +L+ACS + + +
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 133 IHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYVK--- 189
IH K+G +FV N L+ +Y L +A+ + DE+ RDVVS N+L+ GY +
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 190 -------------------AGDLA---------------HARQLFDRMPFRDAVSWGTLV 215
AG +A + + +F +M + VSW ++
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMI 281
Query: 216 AGYAQSDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIR 275
Y ++ EA++L+ M +PD +++ S L AC L GK IH YIE ++
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 276 VDSFLSTGLVDFYAKCGYINTAIEIFESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM 335
+ L L+D YAKCG + A ++FE+ + +++ +W AM+ G G ++ FS++
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 336 IEARIKPDGVTILGALVGCSHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGL 395
++ + PD + + L CSHAGL++E R F M Y ++ L+H CM DLLGRAG
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 396 IEEALEMIKKMPMGGDVFVWSGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADV 455
++EA I+ M M + VW LLG CR+H + +I AA+ + +L PE G Y +L+++
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521
Query: 456 YANADRWEDVVKIRRSLDAGKIKKNAGCSLIQLN 489
YA A RWE+V IR + + +KKN G S +++N
Sbjct: 522 YAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/427 (37%), Positives = 235/427 (55%), Gaps = 37/427 (8%)
Query: 64 ALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRACSQ 123
A +F +P S+ II T A+ FS+M + P+ ++ +L + +
Sbjct: 160 ACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGR 216
Query: 124 LCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTL 183
+ SL + IH +LK SL+ + + N L
Sbjct: 217 VGCLSLGKGIHGLILKRA---------SLI----------------------SLETGNAL 245
Query: 184 IDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLD-IKPD 242
ID YVK L+ A ++F + +D VSW ++++G ++ +EAI LF M IKPD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 243 NIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIFE 302
L S LSACA LG ++ G+ +H YI I+ D+ + T +VD YAKCGYI TA+EIF
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 303 SSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCSHAGLVDE 362
+ KN+FTWNA+L GLA+HG G SL YF M++ KP+ VT L AL C H GLVDE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 363 ARKLFDEMES-VYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLGG 421
R+ F +M+S Y + +L+HYGCM DLL RAGL++EALE++K MP+ DV + +L
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 422 CRIHGNV-EIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAGKIKKN 480
C+ G + E+ + + + ++ ED GVY +L++++A RW+DV +IRR + I K
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 481 AGCSLIQ 487
G S I+
Sbjct: 546 PGSSYIE 552
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 195/427 (45%), Gaps = 50/427 (11%)
Query: 3 LNNFIKRCKTIKQIHQIHAHFLTKGLLFLSPCHILTTILYAITTFKPISSASSPTTDPLS 62
L I RC +++ QI +T+ LL I+ + TF S+ D S
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDD------LIINKVVTFLGKSA------DFAS 56
Query: 63 YALSIFNNI-PYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLRAC 121
Y+ I ++I S+FSYNT++ ++ + P + + + PD ++FP + +AC
Sbjct: 57 YSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKAC 116
Query: 122 SQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCN 181
+ + IH V K+GF D++V NSL+H Y V
Sbjct: 117 GKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGV----------------------- 153
Query: 182 TLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDLDIKP 241
G+ +A ++F MP RD VSW ++ G+ ++ +EA+ F M D++P
Sbjct: 154 --------CGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEP 202
Query: 242 DNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLSTGLVDFYAKCGYINTAIEIF 301
+ V L + R+G L GK IH I + L+D Y KC ++ A+ +F
Sbjct: 203 NLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVF 262
Query: 302 ESSQEKNLFTWNAMLVGLAMHGLGRLSLVYFSRM-IEARIKPDGVTILGALVGCSHAGLV 360
++K+ +WN+M+ GL + ++ FS M + IKPDG + L C+ G V
Sbjct: 263 GELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAV 322
Query: 361 DEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVWSGLLG 420
D R + + + + G+ + + D+ + G IE ALE+ + +VF W+ LLG
Sbjct: 323 DHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGI-RSKNVFTWNALLG 380
Query: 421 GCRIHGN 427
G IHG+
Sbjct: 381 GLAIHGH 387
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 59 DPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVS-IPPDFYSFPFL 117
+ LS A+ +F + S+N++I A+ LFS M+T S I PD + +
Sbjct: 253 EQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSV 312
Query: 118 LRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDV 177
L AC+ L + + +H +L G D + +++ +Y + A E+F+ I ++V
Sbjct: 313 LSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 372
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
+W L+ G A E+++ F M+ L
Sbjct: 373 -------------------------------FTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFLS--TGLVDFYAKCGYIN 295
KP+ + ++AL+AC G +++G+ ++ + + L ++D + G ++
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLD 461
Query: 296 TAIEIFES 303
A+E+ ++
Sbjct: 462 EALELVKA 469
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 243/434 (55%), Gaps = 6/434 (1%)
Query: 61 LSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQM-RTVSIPPDFYSFPFLLR 119
+ A++ F + ++N++I L A+ +FS+M R + PD ++ +L
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 120 ACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRD--V 177
AC+ L + + IHS ++ GF VLN+L+ +Y + A+ L ++ +D +
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 178 VSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCEEAIQLFCNMMDL 237
L+DGY+K GD+ A+ +F + RD V+W ++ GY Q EAI LF +M+
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 238 DIKPDNIALVSALSACARLGELEQGKNIH-RYIELNQIRVDSFLSTGLVDFYAKCGYINT 296
+P++ L + LS + L L GK IH ++ +I S +S L+ YAK G I +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS-VSNALITMYAKAGNITS 466
Query: 297 AIEIFESSQ-EKNLFTWNAMLVGLAMHGLGRLSLVYFSRMIEARIKPDGVTILGALVGCS 355
A F+ + E++ +W +M++ LA HG +L F M+ ++PD +T +G C+
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 356 HAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLIEEALEMIKKMPMGGDVFVW 415
HAGLV++ R+ FD M+ V + L HY CM DL GRAGL++EA E I+KMP+ DV W
Sbjct: 527 HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 416 SGLLGGCRIHGNVEIAEAAAEHVMKLKPEDGGVYKVLADVYANADRWEDVVKIRRSLDAG 475
LL CR+H N+++ + AAE ++ L+PE+ G Y LA++Y+ +WE+ KIR+S+ G
Sbjct: 587 GSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDG 646
Query: 476 KIKKNAGCSLIQLN 489
++KK G S I++
Sbjct: 647 RVKKEQGFSWIEVK 660
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 175/396 (44%), Gaps = 83/396 (20%)
Query: 109 PDFYSFPFLLRACSQLCSHSL--------AQTIHSQVLKLGFICDVFVLNSLMHVYCVFH 160
P S LL C+ L S+ AQ +H +V+K G + V+++N+LM+VY
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 161 RLRDAQELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQ 220
A++LFDE+ R S NT++ Y K GD+ + FD++P RD+VSW T++ GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 221 SDQCEEAIQLFCNMMDLDIKPDNIALVSALSACARLGELEQGKNIHRYIELNQIRVDSFL 280
Q +AI++ +M+ I+P L + L++ A +E GK +H +I +R + +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 281 STGLVDFYAKC-------------------------------GYINTAIEIFESSQEKNL 309
S L++ YAKC G ++ A+ FE E+++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 310 FTWNAMLVGLAMHGLGRLSLVYFSRMI-EARIKPDGVTILGALVGC-------------- 354
TWN+M+ G G +L FS+M+ ++ + PD T+ L C
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 355 ---------------------SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLG-- 391
S G V+ AR+L ++ +K+LK G A L G
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG-----TKDLKIEGFTALLDGYI 358
Query: 392 RAGLIEEALEMIKKMPMGGDVFVWSGLLGGCRIHGN 427
+ G + +A + + DV W+ ++ G HG+
Sbjct: 359 KLGDMNQAKNIFVSLK-DRDVVAWTAMIVGYEQHGS 393
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 192/449 (42%), Gaps = 77/449 (17%)
Query: 46 TFKPISSASSPTTDPLSYALSIFNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTV 105
++ + SA S D + F+ +P + S+ T+I + A+ + M
Sbjct: 82 SWNTVLSAYSKRGD-MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 106 SIPPDFYSFPFLLRACSQLCSHSLAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDA 165
I P ++ +L + + + +HS ++KLG +V V NSL+++Y A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 166 QELFDEILYRDVVSCNTLIDGYVKAGDLAHARQLFDRMPFRDAVSWGTLVAGYAQSDQCE 225
+ +FD ++ RD+ S N +I +++ G + A F++M RD V+W ++++G+ Q
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 226 EAIQLFCNMM-DLDIKPDNIALVSALSACARLGELEQGKNIHRYI-----ELNQIRVDSF 279
A+ +F M+ D + PD L S LSACA L +L GK IH +I +++ I +++
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 280 LS----------------------------TGLVDFYAKCGYINTAIEIFESSQEKNLFT 311
+S T L+D Y K G +N A IF S +++++
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 312 WNAMLVGLAMHGLGRLSLVYFSRMIEARIKPD---------------------------- 343
W AM+VG HG ++ F M+ +P+
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 344 ------GVTILGALVGC-SHAGLVDEARKLFDEMESVYGVSKELKHYGCMADLLGRAGLI 396
V++ AL+ + AG + A + FD + ++ + M L + G
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR----CERDTVSWTSMIIALAQHGHA 496
Query: 397 EEALEMIKKMPMGG---DVFVWSGLLGGC 422
EEALE+ + M M G D + G+ C
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSAC 525
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,970,165
Number of Sequences: 539616
Number of extensions: 7363730
Number of successful extensions: 30528
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 23743
Number of HSP's gapped (non-prelim): 2030
length of query: 490
length of database: 191,569,459
effective HSP length: 122
effective length of query: 368
effective length of database: 125,736,307
effective search space: 46270960976
effective search space used: 46270960976
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)