Query 042267
Match_columns 107
No_of_seqs 131 out of 1049
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 07:28:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 1.6E-27 5.4E-32 165.8 12.2 102 2-107 244-345 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 1.9E-23 6.5E-28 145.8 12.5 105 3-107 260-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 1.1E-22 3.8E-27 142.1 12.5 105 3-107 262-366 (368)
4 3lst_A CALO1 methyltransferase 99.9 3.1E-21 1.1E-25 133.6 11.4 101 2-107 247-347 (348)
5 3i53_A O-methyltransferase; CO 99.8 4.4E-21 1.5E-25 131.9 9.7 97 2-107 235-331 (332)
6 3gwz_A MMCR; methyltransferase 99.8 4.8E-21 1.7E-25 133.7 9.9 100 2-107 268-368 (369)
7 1zg3_A Isoflavanone 4'-O-methy 99.8 1E-20 3.5E-25 131.4 10.7 105 2-107 251-358 (358)
8 2ip2_A Probable phenazine-spec 99.8 2.1E-20 7E-25 128.5 10.5 101 2-107 233-333 (334)
9 1fp1_D Isoliquiritigenin 2'-O- 99.8 4.6E-20 1.6E-24 128.7 9.8 104 3-107 268-372 (372)
10 1fp2_A Isoflavone O-methyltran 99.8 7E-20 2.4E-24 127.0 10.4 104 2-107 246-352 (352)
11 3mcz_A O-methyltransferase; ad 99.8 3.6E-19 1.2E-23 123.0 10.5 101 2-107 248-348 (352)
12 3dp7_A SAM-dependent methyltra 99.8 1.2E-19 4.2E-24 126.4 7.7 105 2-107 248-354 (363)
13 2r3s_A Uncharacterized protein 99.8 3.4E-18 1.2E-22 117.2 10.4 102 2-106 232-333 (335)
14 1tw3_A COMT, carminomycin 4-O- 99.8 1.6E-18 5.6E-23 120.1 7.6 101 2-107 249-355 (360)
15 1qzz_A RDMB, aclacinomycin-10- 99.7 4E-18 1.4E-22 118.6 7.2 101 2-107 248-355 (374)
16 1x19_A CRTF-related protein; m 99.7 5.6E-17 1.9E-21 112.5 10.7 99 2-107 256-358 (359)
17 3dtn_A Putative methyltransfer 99.4 1.2E-12 4.3E-17 85.3 9.3 104 2-107 109-225 (234)
18 4gek_A TRNA (CMO5U34)-methyltr 99.4 3.3E-12 1.1E-16 85.6 10.1 104 2-107 139-256 (261)
19 3dh0_A SAM dependent methyltra 99.3 2.5E-11 8.6E-16 78.3 9.4 87 2-107 106-192 (219)
20 1xtp_A LMAJ004091AAA; SGPP, st 99.2 5.6E-11 1.9E-15 78.1 8.2 82 2-97 158-239 (254)
21 2ex4_A Adrenal gland protein A 99.2 8.5E-11 2.9E-15 77.1 8.2 81 2-97 146-226 (241)
22 3ou2_A SAM-dependent methyltra 99.2 5.7E-11 1.9E-15 76.3 7.1 90 2-94 107-203 (218)
23 1kpg_A CFA synthase;, cyclopro 99.2 2.3E-10 8E-15 76.7 10.3 95 2-96 129-228 (287)
24 3i9f_A Putative type 11 methyl 99.2 6.5E-11 2.2E-15 73.7 6.9 84 2-106 75-158 (170)
25 3hnr_A Probable methyltransfer 99.2 2.1E-10 7.1E-15 74.0 9.3 104 2-106 106-210 (220)
26 3h2b_A SAM-dependent methyltra 99.2 1.1E-10 3.9E-15 74.5 7.5 89 2-104 102-191 (203)
27 3pfg_A N-methyltransferase; N, 99.1 2.4E-11 8.2E-16 80.6 3.9 106 2-107 110-248 (263)
28 3ujc_A Phosphoethanolamine N-m 99.1 1.7E-10 5.8E-15 76.1 7.8 87 2-96 120-206 (266)
29 3bxo_A N,N-dimethyltransferase 99.1 2.9E-11 9.8E-16 78.8 4.0 106 2-107 100-238 (239)
30 3dlc_A Putative S-adenosyl-L-m 99.1 1.6E-11 5.6E-16 78.7 2.7 95 2-100 111-207 (219)
31 3lcc_A Putative methyl chlorid 99.1 2.2E-10 7.6E-15 74.7 7.1 77 2-97 132-208 (235)
32 1vl5_A Unknown conserved prote 99.1 1.4E-10 4.8E-15 76.8 6.1 88 2-96 103-190 (260)
33 2fk8_A Methoxy mycolic acid sy 99.1 7.1E-10 2.4E-14 75.4 9.6 95 2-96 155-254 (318)
34 3ocj_A Putative exported prote 99.1 5.5E-10 1.9E-14 75.7 8.9 106 2-107 187-303 (305)
35 3e23_A Uncharacterized protein 99.1 3.3E-10 1.1E-14 72.8 7.2 80 2-96 102-182 (211)
36 1xxl_A YCGJ protein; structura 99.1 3.2E-10 1.1E-14 74.4 7.1 88 2-96 87-174 (239)
37 1ve3_A Hypothetical protein PH 99.1 3.8E-11 1.3E-15 77.7 2.5 104 2-107 103-226 (227)
38 3dli_A Methyltransferase; PSI- 99.1 7.3E-10 2.5E-14 72.6 8.6 85 2-97 101-185 (240)
39 3bus_A REBM, methyltransferase 99.1 5.2E-10 1.8E-14 74.3 7.7 88 2-96 129-216 (273)
40 2o57_A Putative sarcosine dime 99.1 6.4E-10 2.2E-14 74.8 8.0 85 2-96 150-234 (297)
41 3sm3_A SAM-dependent methyltra 99.0 8.7E-10 3E-14 71.4 7.9 90 2-95 101-206 (235)
42 2qe6_A Uncharacterized protein 99.0 4.4E-10 1.5E-14 75.6 6.7 82 2-92 157-238 (274)
43 3hem_A Cyclopropane-fatty-acyl 99.0 1.5E-09 5.2E-14 73.3 9.3 96 2-97 137-244 (302)
44 3l8d_A Methyltransferase; stru 99.0 8.8E-10 3E-14 71.9 6.8 85 2-96 116-200 (242)
45 2zfu_A Nucleomethylin, cerebra 99.0 1E-09 3.5E-14 70.6 6.9 76 2-107 115-190 (215)
46 1nkv_A Hypothetical protein YJ 99.0 5.2E-10 1.8E-14 73.6 5.5 85 2-96 103-187 (256)
47 3mgg_A Methyltransferase; NYSG 99.0 8.7E-10 3E-14 73.4 6.2 90 2-96 105-198 (276)
48 4fsd_A Arsenic methyltransfera 99.0 2.4E-09 8.2E-14 74.9 8.6 85 2-95 166-250 (383)
49 3g2m_A PCZA361.24; SAM-depende 99.0 1.2E-09 4.1E-14 73.8 6.6 105 2-106 150-290 (299)
50 3e8s_A Putative SAM dependent 99.0 1.1E-09 3.7E-14 70.5 5.7 91 2-95 116-208 (227)
51 2p7i_A Hypothetical protein; p 99.0 3.9E-09 1.3E-13 68.7 8.3 90 2-96 103-199 (250)
52 2aot_A HMT, histamine N-methyl 98.9 2.3E-09 7.9E-14 72.3 7.1 84 2-93 135-218 (292)
53 2ld4_A Anamorsin; methyltransf 98.9 2.6E-09 8.7E-14 66.9 6.7 65 2-88 63-128 (176)
54 3vc1_A Geranyl diphosphate 2-C 98.9 3.8E-09 1.3E-13 71.8 7.6 85 2-96 185-269 (312)
55 2xvm_A Tellurite resistance pr 98.9 4.6E-09 1.6E-13 66.4 6.8 75 2-94 97-171 (199)
56 3f4k_A Putative methyltransfer 98.9 5E-09 1.7E-13 68.9 7.0 84 2-97 114-197 (257)
57 3bkw_A MLL3908 protein, S-aden 98.9 2.4E-08 8.3E-13 64.9 9.8 93 2-96 107-214 (243)
58 2a14_A Indolethylamine N-methy 98.9 5.2E-09 1.8E-13 69.7 6.5 81 2-96 156-238 (263)
59 1vlm_A SAM-dependent methyltra 98.9 7E-09 2.4E-13 67.0 7.0 87 2-96 102-188 (219)
60 3kkz_A Uncharacterized protein 98.8 7.4E-09 2.5E-13 68.7 6.8 84 2-97 114-197 (267)
61 3bkx_A SAM-dependent methyltra 98.8 1.9E-08 6.6E-13 66.8 8.6 92 2-96 122-219 (275)
62 4htf_A S-adenosylmethionine-de 98.8 4.1E-09 1.4E-13 70.6 5.1 91 2-97 136-233 (285)
63 4e2x_A TCAB9; kijanose, tetron 98.8 8.4E-09 2.9E-13 72.6 6.9 84 2-97 171-254 (416)
64 3cc8_A Putative methyltransfer 98.8 2.1E-09 7.2E-14 69.3 3.1 90 2-96 93-185 (230)
65 3d2l_A SAM-dependent methyltra 98.8 1.5E-08 5.2E-13 65.9 7.1 38 2-39 96-135 (243)
66 1y8c_A S-adenosylmethionine-de 98.8 2.1E-09 7.3E-14 70.0 2.9 39 2-40 101-141 (246)
67 3g5l_A Putative S-adenosylmeth 98.8 5.8E-09 2E-13 68.6 4.4 93 2-96 108-216 (253)
68 3cgg_A SAM-dependent methyltra 98.8 3.6E-08 1.2E-12 61.8 7.8 67 2-95 107-174 (195)
69 2i62_A Nicotinamide N-methyltr 98.8 1E-08 3.6E-13 67.5 5.5 81 2-96 157-239 (265)
70 3gu3_A Methyltransferase; alph 98.8 1E-08 3.5E-13 68.8 5.2 89 2-94 89-188 (284)
71 2g72_A Phenylethanolamine N-me 98.8 5.8E-09 2E-13 70.1 3.9 80 3-96 175-256 (289)
72 1pjz_A Thiopurine S-methyltran 98.7 2.6E-08 9E-13 63.9 6.7 76 2-96 101-176 (203)
73 2p8j_A S-adenosylmethionine-de 98.7 5.3E-09 1.8E-13 66.8 2.8 90 2-93 89-180 (209)
74 3ggd_A SAM-dependent methyltra 98.7 9.3E-09 3.2E-13 67.3 3.7 91 3-95 125-218 (245)
75 3ege_A Putative methyltransfer 98.7 4.2E-08 1.4E-12 65.0 6.8 85 2-96 94-178 (261)
76 3jwg_A HEN1, methyltransferase 98.7 8.1E-08 2.8E-12 61.8 8.0 83 2-92 102-188 (219)
77 3ccf_A Cyclopropane-fatty-acyl 98.7 1.9E-08 6.4E-13 67.2 5.0 88 2-96 117-210 (279)
78 2yqz_A Hypothetical protein TT 98.7 3E-08 1E-12 65.2 5.3 87 2-94 104-194 (263)
79 3jwh_A HEN1; methyltransferase 98.7 8E-08 2.7E-12 61.8 6.9 83 2-92 102-188 (217)
80 1ri5_A MRNA capping enzyme; me 98.6 3.3E-08 1.1E-12 66.1 4.9 95 2-96 133-250 (298)
81 2p35_A Trans-aconitate 2-methy 98.6 5E-08 1.7E-12 64.1 4.2 87 2-90 95-184 (259)
82 3m70_A Tellurite resistance pr 98.5 3.9E-07 1.3E-11 60.9 7.7 75 2-94 184-258 (286)
83 3giw_A Protein of unknown func 98.5 1.9E-07 6.4E-12 63.1 6.0 80 5-92 163-243 (277)
84 3g07_A 7SK snRNA methylphospha 98.5 2.1E-08 7.1E-13 67.7 0.2 87 2-96 177-269 (292)
85 3thr_A Glycine N-methyltransfe 98.5 3E-08 1E-12 66.5 0.9 41 2-42 130-176 (293)
86 2kw5_A SLR1183 protein; struct 98.5 8.2E-07 2.8E-11 56.3 7.4 77 2-95 94-170 (202)
87 2gb4_A Thiopurine S-methyltran 98.4 5.8E-07 2E-11 59.7 6.8 75 2-95 152-226 (252)
88 1fbn_A MJ fibrillarin homologu 98.3 2.1E-06 7.2E-11 55.8 6.8 81 2-107 143-227 (230)
89 3grz_A L11 mtase, ribosomal pr 98.3 7.9E-07 2.7E-11 56.6 4.1 72 2-107 125-196 (205)
90 2gs9_A Hypothetical protein TT 98.2 1.8E-06 6E-11 55.1 5.5 77 2-87 95-171 (211)
91 3bgv_A MRNA CAP guanine-N7 met 98.1 2.8E-06 9.7E-11 57.5 3.9 41 2-42 114-156 (313)
92 1af7_A Chemotaxis receptor met 98.1 2.6E-06 9E-11 57.4 3.4 38 2-39 213-250 (274)
93 3ofk_A Nodulation protein S; N 98.0 3.5E-06 1.2E-10 53.9 3.7 41 2-42 114-155 (216)
94 3g5t_A Trans-aconitate 3-methy 98.0 2.3E-06 7.8E-11 57.6 2.8 82 2-89 113-197 (299)
95 4df3_A Fibrillarin-like rRNA/T 97.9 2.2E-05 7.5E-10 51.8 5.7 81 2-106 147-230 (233)
96 2vdw_A Vaccinia virus capping 97.9 9.6E-06 3.3E-10 55.1 3.3 41 2-42 129-170 (302)
97 3iv6_A Putative Zn-dependent a 97.8 2.1E-05 7.3E-10 52.6 4.5 40 2-42 110-149 (261)
98 1dus_A MJ0882; hypothetical pr 97.8 4.1E-05 1.4E-09 47.6 5.6 75 2-107 119-193 (194)
99 4hg2_A Methyltransferase type 97.8 1.7E-05 5.7E-10 52.9 3.9 41 2-45 99-139 (257)
100 3bwc_A Spermidine synthase; SA 97.8 6.6E-05 2.3E-09 51.0 6.9 70 2-96 169-240 (304)
101 1g8a_A Fibrillarin-like PRE-rR 97.8 7.2E-05 2.5E-09 48.2 6.6 81 2-107 143-226 (227)
102 3q87_B N6 adenine specific DNA 97.8 0.00015 5E-09 45.0 7.7 74 2-105 78-159 (170)
103 1zx0_A Guanidinoacetate N-meth 97.8 3.7E-06 1.3E-10 54.8 0.3 42 2-43 128-172 (236)
104 2b3t_A Protein methyltransfera 97.8 0.00017 6E-09 47.9 8.5 76 2-107 176-275 (276)
105 2ipx_A RRNA 2'-O-methyltransfe 97.8 1.2E-05 4.2E-10 52.2 2.6 81 2-106 147-230 (233)
106 2nxc_A L11 mtase, ribosomal pr 97.7 7.5E-05 2.6E-09 49.3 6.2 71 2-107 184-254 (254)
107 3hp7_A Hemolysin, putative; st 97.7 0.00011 3.7E-09 50.0 5.9 79 3-95 152-231 (291)
108 3e05_A Precorrin-6Y C5,15-meth 97.6 0.00018 6.1E-09 45.6 6.0 53 2-88 108-160 (204)
109 3orh_A Guanidinoacetate N-meth 97.6 2.8E-06 9.7E-11 55.6 -2.6 75 2-93 128-207 (236)
110 2pxx_A Uncharacterized protein 97.6 3.1E-05 1.1E-09 49.1 2.3 42 2-43 107-161 (215)
111 1l3i_A Precorrin-6Y methyltran 97.5 0.00018 6.2E-09 44.5 5.2 55 2-90 100-154 (192)
112 3evz_A Methyltransferase; NYSG 97.5 0.00029 1E-08 45.3 6.3 67 2-96 123-206 (230)
113 4dzr_A Protein-(glutamine-N5) 97.5 0.00015 5.3E-09 45.7 4.6 56 21-105 144-202 (215)
114 3id6_C Fibrillarin-like rRNA/T 97.5 0.00037 1.3E-08 45.8 6.5 82 2-107 146-230 (232)
115 1wzn_A SAM-dependent methyltra 97.4 0.00014 4.8E-09 47.4 3.6 39 2-40 105-144 (252)
116 2avn_A Ubiquinone/menaquinone 97.4 6.4E-05 2.2E-09 49.5 1.9 41 2-43 114-154 (260)
117 2pjd_A Ribosomal RNA small sub 97.3 0.00011 3.6E-09 50.6 2.7 41 2-42 261-304 (343)
118 3uwp_A Histone-lysine N-methyl 97.3 0.00022 7.6E-09 50.8 4.3 44 2-48 252-295 (438)
119 3htx_A HEN1; HEN1, small RNA m 97.3 0.00036 1.2E-08 53.7 5.2 41 2-43 796-836 (950)
120 3mq2_A 16S rRNA methyltransfer 97.3 0.00013 4.3E-09 46.7 2.2 65 21-96 120-184 (218)
121 3hm2_A Precorrin-6Y C5,15-meth 97.2 0.00026 8.9E-09 43.5 3.6 35 2-42 94-128 (178)
122 3eey_A Putative rRNA methylase 97.2 0.00042 1.4E-08 43.5 4.1 42 2-43 93-141 (197)
123 1nt2_A Fibrillarin-like PRE-rR 97.2 0.0014 4.9E-08 42.0 6.5 81 2-107 126-209 (210)
124 1o9g_A RRNA methyltransferase; 97.1 0.00091 3.1E-08 43.7 5.2 42 2-43 168-216 (250)
125 2vz8_A Fatty acid synthase; tr 97.1 0.00012 4.3E-09 61.4 1.0 83 2-94 1311-1393(2512)
126 3m33_A Uncharacterized protein 97.1 5.9E-05 2E-09 48.7 -0.9 56 2-95 111-166 (226)
127 3p2e_A 16S rRNA methylase; met 97.0 0.00092 3.1E-08 43.4 4.8 67 21-96 119-185 (225)
128 1ej0_A FTSJ; methyltransferase 97.0 0.0008 2.7E-08 40.8 4.2 42 2-43 88-138 (180)
129 3fzg_A 16S rRNA methylase; met 97.0 0.00063 2.1E-08 43.8 3.8 38 2-41 115-152 (200)
130 3lpm_A Putative methyltransfer 97.0 0.0032 1.1E-07 41.4 7.2 75 2-106 119-217 (259)
131 1u2z_A Histone-lysine N-methyl 97.0 0.00087 3E-08 47.8 4.4 43 2-47 323-365 (433)
132 1xdz_A Methyltransferase GIDB; 97.0 0.0011 3.6E-08 43.2 4.5 61 2-95 141-201 (240)
133 3b5i_A S-adenosyl-L-methionine 96.9 0.0073 2.5E-07 42.3 8.8 90 2-94 150-296 (374)
134 3bzb_A Uncharacterized protein 96.9 0.0012 4.3E-08 44.0 4.5 37 2-40 163-204 (281)
135 3mti_A RRNA methylase; SAM-dep 96.8 0.0012 4E-08 41.0 3.5 42 2-43 89-137 (185)
136 3opn_A Putative hemolysin; str 96.7 0.00083 2.8E-08 43.9 2.7 66 21-95 117-183 (232)
137 3dmg_A Probable ribosomal RNA 96.7 0.0012 4.1E-08 46.3 3.6 40 2-41 298-340 (381)
138 3p9n_A Possible methyltransfer 96.7 0.0061 2.1E-07 37.9 6.3 42 2-44 113-156 (189)
139 2y1w_A Histone-arginine methyl 96.6 0.00066 2.3E-08 46.8 1.7 39 2-40 116-154 (348)
140 3sso_A Methyltransferase; macr 96.6 0.00083 2.8E-08 47.7 2.0 40 2-44 288-327 (419)
141 3lcv_B Sisomicin-gentamicin re 96.6 0.0053 1.8E-07 41.4 5.7 69 2-92 198-268 (281)
142 2h00_A Methyltransferase 10 do 96.6 1.8E-05 6.2E-10 51.9 -6.3 86 2-96 140-238 (254)
143 3duw_A OMT, O-methyltransferas 96.6 0.0069 2.3E-07 38.6 6.1 38 2-44 133-170 (223)
144 2qm3_A Predicted methyltransfe 96.5 0.011 3.9E-07 41.0 7.1 40 2-44 241-280 (373)
145 1rjd_A PPM1P, carboxy methyl t 96.5 0.0099 3.4E-07 41.0 6.7 84 3-89 195-281 (334)
146 3r3h_A O-methyltransferase, SA 96.4 0.011 3.9E-07 38.6 6.5 39 2-45 136-174 (242)
147 4dcm_A Ribosomal RNA large sub 96.4 0.0018 6.2E-08 45.2 2.7 40 2-41 292-334 (375)
148 3g89_A Ribosomal RNA small sub 96.4 0.0026 8.7E-08 41.9 3.3 62 2-96 151-212 (249)
149 3fpf_A Mtnas, putative unchara 96.3 0.0055 1.9E-07 41.7 4.8 35 2-41 188-222 (298)
150 2hnk_A SAM-dependent O-methylt 96.3 0.0098 3.3E-07 38.4 5.6 38 2-44 147-184 (239)
151 3u81_A Catechol O-methyltransf 96.3 0.0022 7.7E-08 41.0 2.5 39 2-43 134-172 (221)
152 3tfw_A Putative O-methyltransf 96.2 0.0071 2.4E-07 39.5 4.8 38 2-44 136-173 (248)
153 3lbf_A Protein-L-isoaspartate 96.2 0.0025 8.6E-08 40.2 2.4 33 2-42 143-175 (210)
154 2yxe_A Protein-L-isoaspartate 96.2 0.0029 9.8E-08 40.1 2.6 32 2-41 146-177 (215)
155 3mb5_A SAM-dependent methyltra 96.2 0.0024 8.2E-08 41.6 2.2 58 2-95 162-221 (255)
156 2nyu_A Putative ribosomal RNA 96.2 0.0024 8.3E-08 39.8 2.1 41 2-42 97-146 (196)
157 2frn_A Hypothetical protein PH 96.1 0.018 6E-07 38.4 6.4 62 2-92 192-253 (278)
158 3b3j_A Histone-arginine methyl 96.1 0.0013 4.3E-08 47.5 0.6 38 2-39 224-261 (480)
159 2plw_A Ribosomal RNA methyltra 96.1 0.0078 2.7E-07 37.6 4.2 40 2-41 106-154 (201)
160 1vbf_A 231AA long hypothetical 96.1 0.0038 1.3E-07 40.0 2.7 33 2-42 134-166 (231)
161 2xyq_A Putative 2'-O-methyl tr 96.0 0.0098 3.3E-07 40.3 4.5 40 2-41 123-171 (290)
162 1m6e_X S-adenosyl-L-methionnin 95.9 0.092 3.2E-06 36.6 9.4 92 2-93 139-277 (359)
163 2gpy_A O-methyltransferase; st 95.9 0.0041 1.4E-07 40.0 2.4 38 2-44 126-163 (233)
164 1ws6_A Methyltransferase; stru 95.8 0.01 3.6E-07 35.8 3.7 38 2-43 110-149 (171)
165 2efj_A 3,7-dimethylxanthine me 95.7 0.047 1.6E-06 38.4 7.3 72 23-94 207-290 (384)
166 2i7c_A Spermidine synthase; tr 95.6 0.0072 2.5E-07 40.5 2.8 39 2-40 151-191 (283)
167 3tr6_A O-methyltransferase; ce 95.6 0.0086 2.9E-07 38.1 3.0 39 2-45 140-178 (225)
168 3iei_A Leucine carboxyl methyl 95.6 0.034 1.2E-06 38.3 6.1 84 5-96 194-281 (334)
169 1jg1_A PIMT;, protein-L-isoasp 95.6 0.0073 2.5E-07 39.0 2.6 32 2-41 158-189 (235)
170 3njr_A Precorrin-6Y methylase; 95.5 0.018 6.1E-07 36.5 4.2 56 2-93 122-177 (204)
171 1dl5_A Protein-L-isoaspartate 95.4 0.0095 3.2E-07 40.4 2.7 32 2-41 144-175 (317)
172 2ozv_A Hypothetical protein AT 95.3 0.0085 2.9E-07 39.5 2.2 40 2-41 115-170 (260)
173 1mjf_A Spermidine synthase; sp 95.2 0.011 3.6E-07 39.6 2.5 40 2-41 152-193 (281)
174 3c3p_A Methyltransferase; NP_9 95.2 0.012 4E-07 37.2 2.6 37 3-44 127-163 (210)
175 2bm8_A Cephalosporin hydroxyla 95.2 0.019 6.4E-07 37.4 3.5 36 2-42 152-188 (236)
176 3adn_A Spermidine synthase; am 95.2 0.012 4.2E-07 39.7 2.7 40 2-41 157-198 (294)
177 3gjy_A Spermidine synthase; AP 95.1 0.014 4.7E-07 40.1 2.9 41 2-42 159-201 (317)
178 2avd_A Catechol-O-methyltransf 95.1 0.014 4.7E-07 37.3 2.6 38 2-44 145-182 (229)
179 2fhp_A Methylase, putative; al 95.1 0.028 9.4E-07 34.5 3.9 39 2-43 116-156 (187)
180 1r18_A Protein-L-isoaspartate( 95.0 0.014 4.6E-07 37.4 2.6 32 2-41 163-194 (227)
181 3r0q_C Probable protein argini 95.0 0.0085 2.9E-07 41.7 1.6 42 2-43 129-171 (376)
182 2p41_A Type II methyltransfera 95.0 0.025 8.4E-07 38.4 3.8 39 2-40 148-190 (305)
183 1uir_A Polyamine aminopropyltr 95.0 0.015 5.1E-07 39.5 2.7 40 2-41 151-195 (314)
184 2b2c_A Spermidine synthase; be 95.0 0.011 3.9E-07 40.2 2.1 40 2-41 181-222 (314)
185 3q7e_A Protein arginine N-meth 95.0 0.011 3.7E-07 40.7 2.0 38 2-39 133-171 (349)
186 1sui_A Caffeoyl-COA O-methyltr 94.9 0.03 1E-06 36.7 4.0 38 2-44 156-193 (247)
187 2ift_A Putative methylase HI07 94.9 0.015 5.2E-07 36.7 2.5 38 3-43 126-165 (201)
188 1yb2_A Hypothetical protein TA 94.8 0.0084 2.9E-07 39.7 1.1 58 2-95 179-236 (275)
189 2pwy_A TRNA (adenine-N(1)-)-me 94.8 0.0087 3E-07 38.8 1.2 33 2-41 166-198 (258)
190 1ixk_A Methyltransferase; open 94.8 0.024 8.3E-07 38.4 3.4 24 21-44 226-249 (315)
191 3dr5_A Putative O-methyltransf 94.8 0.019 6.4E-07 37.0 2.7 38 2-44 129-166 (221)
192 3c3y_A Pfomt, O-methyltransfer 94.8 0.026 9E-07 36.6 3.4 37 2-43 147-183 (237)
193 3cbg_A O-methyltransferase; cy 94.7 0.018 6.3E-07 37.1 2.6 38 2-44 148-185 (232)
194 1p91_A Ribosomal RNA large sub 94.7 0.023 8E-07 37.1 3.1 34 2-44 148-181 (269)
195 2zwa_A Leucine carboxyl methyl 94.6 0.2 6.8E-06 37.5 8.2 87 5-95 220-308 (695)
196 3ntv_A MW1564 protein; rossman 94.6 0.012 4.1E-07 38.0 1.4 38 2-44 142-179 (232)
197 2fyt_A Protein arginine N-meth 94.6 0.025 8.4E-07 38.8 3.1 37 2-38 131-168 (340)
198 1jsx_A Glucose-inhibited divis 94.6 0.013 4.4E-07 36.7 1.5 33 2-40 132-164 (207)
199 2yxl_A PH0851 protein, 450AA l 94.6 0.032 1.1E-06 39.7 3.7 44 2-45 330-393 (450)
200 2esr_A Methyltransferase; stru 94.5 0.017 5.9E-07 35.3 2.0 39 2-43 100-140 (177)
201 3kr9_A SAM-dependent methyltra 94.5 0.34 1.2E-05 31.5 8.2 69 2-105 84-155 (225)
202 1yzh_A TRNA (guanine-N(7)-)-me 94.5 0.053 1.8E-06 34.3 4.2 39 2-40 111-155 (214)
203 3ajd_A Putative methyltransfer 94.4 0.047 1.6E-06 36.1 4.0 25 20-44 190-214 (274)
204 1g6q_1 HnRNP arginine N-methyl 94.4 0.021 7.3E-07 38.9 2.4 38 2-39 105-143 (328)
205 2pbf_A Protein-L-isoaspartate 94.4 0.027 9.2E-07 35.9 2.7 33 2-42 162-194 (227)
206 2pt6_A Spermidine synthase; tr 94.3 0.029 1E-06 38.3 2.8 39 2-40 189-229 (321)
207 2o07_A Spermidine synthase; st 94.2 0.021 7.2E-07 38.7 2.1 40 2-41 168-209 (304)
208 2yvl_A TRMI protein, hypotheti 94.1 0.026 8.8E-07 36.3 2.3 34 2-42 158-191 (248)
209 1xj5_A Spermidine synthase 1; 94.1 0.026 8.8E-07 38.9 2.3 39 2-40 194-234 (334)
210 1iy9_A Spermidine synthase; ro 94.1 0.017 5.8E-07 38.5 1.3 39 2-40 148-188 (275)
211 1i1n_A Protein-L-isoaspartate 94.0 0.035 1.2E-06 35.3 2.7 32 2-41 151-182 (226)
212 3dxy_A TRNA (guanine-N(7)-)-me 94.0 0.028 9.7E-07 36.1 2.2 40 2-41 105-150 (218)
213 2frx_A Hypothetical protein YE 93.9 0.08 2.7E-06 38.2 4.6 24 21-44 226-249 (479)
214 3m6w_A RRNA methylase; rRNA me 93.8 0.047 1.6E-06 39.3 3.2 23 21-43 209-231 (464)
215 3dou_A Ribosomal RNA large sub 93.8 0.024 8.2E-07 35.7 1.5 23 20-42 118-140 (191)
216 1o54_A SAM-dependent O-methylt 93.7 0.022 7.5E-07 37.6 1.3 33 2-41 181-213 (277)
217 2fca_A TRNA (guanine-N(7)-)-me 93.7 0.075 2.6E-06 33.8 3.8 21 21-41 133-153 (213)
218 1sqg_A SUN protein, FMU protei 93.5 0.07 2.4E-06 37.7 3.8 43 2-44 315-377 (429)
219 2f8l_A Hypothetical protein LM 93.5 0.049 1.7E-06 37.2 2.9 40 2-41 201-256 (344)
220 1i9g_A Hypothetical protein RV 93.4 0.028 9.5E-07 36.9 1.5 34 2-42 171-204 (280)
221 2qy6_A UPF0209 protein YFCK; s 93.4 0.14 4.8E-06 33.9 4.8 18 22-39 194-211 (257)
222 2fpo_A Methylase YHHF; structu 93.3 0.069 2.4E-06 33.6 3.1 39 2-43 122-162 (202)
223 2yxd_A Probable cobalt-precorr 93.2 0.1 3.4E-06 31.6 3.7 55 2-93 100-154 (183)
224 2cmg_A Spermidine synthase; tr 93.2 0.05 1.7E-06 36.1 2.4 32 2-40 139-170 (262)
225 1inl_A Spermidine synthase; be 93.0 0.045 1.5E-06 36.8 2.0 39 2-40 163-204 (296)
226 2oxt_A Nucleoside-2'-O-methylt 93.0 0.1 3.4E-06 34.7 3.6 41 2-43 140-187 (265)
227 2uyo_A Hypothetical protein ML 92.8 0.21 7.2E-06 34.0 5.1 83 5-91 182-274 (310)
228 2wa2_A Non-structural protein 92.7 0.11 3.9E-06 34.6 3.6 40 2-42 148-194 (276)
229 3ckk_A TRNA (guanine-N(7)-)-me 92.4 0.087 3E-06 34.2 2.7 21 21-41 148-168 (235)
230 3lec_A NADB-rossmann superfami 92.0 1.3 4.3E-05 28.9 7.9 70 2-106 90-162 (230)
231 3gdh_A Trimethylguanosine synt 91.9 0.0031 1.1E-07 40.7 -4.7 36 2-39 144-179 (241)
232 3frh_A 16S rRNA methylase; met 91.5 0.062 2.1E-06 35.7 1.2 39 2-41 168-206 (253)
233 2igt_A SAM dependent methyltra 91.5 0.33 1.1E-05 33.2 4.8 41 2-43 225-274 (332)
234 2b25_A Hypothetical protein; s 91.4 0.099 3.4E-06 35.5 2.2 34 2-42 187-220 (336)
235 3a27_A TYW2, uncharacterized p 90.8 0.083 2.8E-06 35.0 1.3 38 2-45 186-223 (272)
236 2as0_A Hypothetical protein PH 90.3 0.28 9.7E-06 34.1 3.8 41 2-42 289-336 (396)
237 1wxx_A TT1595, hypothetical pr 89.7 0.35 1.2E-05 33.6 3.8 41 2-42 279-326 (382)
238 3tma_A Methyltransferase; thum 89.2 0.53 1.8E-05 32.1 4.3 39 3-41 273-317 (354)
239 3m4x_A NOL1/NOP2/SUN family pr 88.9 0.21 7E-06 35.9 2.2 24 21-44 214-237 (456)
240 1ne2_A Hypothetical protein TA 88.8 0.32 1.1E-05 30.1 2.9 30 2-31 110-139 (200)
241 4azs_A Methyltransferase WBDD; 88.8 0.078 2.7E-06 38.8 -0.1 44 2-45 134-177 (569)
242 3gnl_A Uncharacterized protein 88.6 2.7 9.2E-05 27.6 7.3 68 3-105 91-161 (244)
243 3k6r_A Putative transferase PH 88.4 0.47 1.6E-05 31.8 3.6 61 2-91 192-252 (278)
244 1nv8_A HEMK protein; class I a 88.2 0.6 2E-05 31.1 4.0 19 21-39 228-247 (284)
245 2vdv_E TRNA (guanine-N(7)-)-me 87.9 0.15 5E-06 33.0 0.8 20 21-40 153-172 (246)
246 2okc_A Type I restriction enzy 86.6 0.28 9.7E-06 34.7 1.7 40 2-41 253-307 (445)
247 4dmg_A Putative uncharacterize 86.2 0.72 2.5E-05 32.3 3.6 42 2-43 280-328 (393)
248 2km1_A Protein DRE2; yeast, an 84.6 0.54 1.8E-05 28.3 2.0 19 21-39 78-96 (136)
249 1wg8_A Predicted S-adenosylmet 84.5 0.48 1.6E-05 32.0 2.0 29 18-46 210-238 (285)
250 3tka_A Ribosomal RNA small sub 84.3 0.47 1.6E-05 32.9 1.9 27 18-44 251-277 (347)
251 3c0k_A UPF0064 protein YCCW; P 84.2 0.96 3.3E-05 31.4 3.5 39 2-41 293-339 (396)
252 3o4f_A Spermidine synthase; am 83.3 0.39 1.3E-05 32.6 1.2 39 2-41 157-198 (294)
253 2b78_A Hypothetical protein SM 83.3 0.51 1.7E-05 32.8 1.8 40 2-41 285-331 (385)
254 2ih2_A Modification methylase 82.8 1.3 4.5E-05 30.6 3.7 21 22-42 145-165 (421)
255 3evf_A RNA-directed RNA polyme 80.4 1.3 4.3E-05 29.9 2.8 38 2-39 140-182 (277)
256 2yx1_A Hypothetical protein MJ 79.9 0.93 3.2E-05 30.9 2.1 37 2-44 258-294 (336)
257 2qfm_A Spermine synthase; sper 79.3 1.4 4.6E-05 30.8 2.8 40 2-41 267-314 (364)
258 1m6y_A S-adenosyl-methyltransf 78.9 0.87 3E-05 30.8 1.7 27 18-44 222-248 (301)
259 3v97_A Ribosomal RNA large sub 78.8 0.82 2.8E-05 34.5 1.7 40 2-41 609-657 (703)
260 4hc4_A Protein arginine N-meth 78.3 1.2 4.2E-05 31.1 2.3 37 2-38 149-186 (376)
261 3c6k_A Spermine synthase; sper 76.8 1.6 5.6E-05 30.6 2.6 21 20-40 310-330 (381)
262 2cz4_A Hypothetical protein TT 75.8 5.1 0.00017 23.3 4.2 27 16-42 82-110 (119)
263 1wy7_A Hypothetical protein PH 74.6 3.7 0.00013 25.2 3.6 30 2-31 112-141 (207)
264 1wzn_A SAM-dependent methyltra 74.2 7.6 0.00026 24.5 5.2 22 73-95 209-230 (252)
265 4fzv_A Putative methyltransfer 72.9 2 6.8E-05 29.8 2.2 26 21-46 264-289 (359)
266 2ar0_A M.ecoki, type I restric 70.8 3.6 0.00012 30.0 3.3 40 2-41 261-312 (541)
267 1ssz_A Pulmonary surfactant-as 70.7 2.4 8.1E-05 18.5 1.4 18 20-37 4-21 (34)
268 3rht_A (gatase1)-like protein; 68.7 7.1 0.00024 25.8 4.1 36 2-41 50-86 (259)
269 2zig_A TTHA0409, putative modi 68.4 2.4 8.2E-05 28.3 1.8 20 21-40 77-96 (297)
270 1zq9_A Probable dimethyladenos 67.8 1.2 4.2E-05 29.5 0.3 35 2-37 93-143 (285)
271 3cvo_A Methyltransferase-like 66.6 6.7 0.00023 25.0 3.5 35 2-44 122-156 (202)
272 2hiy_A Hypothetical protein; C 66.4 5.7 0.00019 24.9 3.1 26 69-94 16-42 (183)
273 3tm4_A TRNA (guanine N2-)-meth 65.8 28 0.00094 23.9 6.8 21 76-96 332-352 (373)
274 2rbg_A Putative uncharacterize 65.6 4.8 0.00016 23.5 2.4 30 11-41 66-95 (126)
275 3dmg_A Probable ribosomal RNA 64.2 6.9 0.00024 27.2 3.5 23 19-41 117-139 (381)
276 3fpn_B Geobacillus stearotherm 63.8 3.4 0.00012 23.5 1.6 31 70-100 19-49 (106)
277 3vyw_A MNMC2; tRNA wobble urid 61.5 4.6 0.00016 27.5 2.1 22 76-97 228-249 (308)
278 3cxj_A Uncharacterized protein 59.6 5.5 0.00019 24.7 2.1 21 74-94 3-23 (165)
279 1whz_A Hypothetical protein; a 59.6 7.6 0.00026 20.0 2.4 20 74-93 5-24 (70)
280 2dwf_A Pulmonary surfactant-as 59.0 5 0.00017 17.9 1.3 18 20-37 4-21 (34)
281 1boo_A Protein (N-4 cytosine-s 57.7 4.9 0.00017 27.2 1.8 21 20-40 63-83 (323)
282 2h80_A STAR-related lipid tran 53.5 3.5 0.00012 22.2 0.4 19 73-91 18-36 (81)
283 4e5v_A Putative THUA-like prot 52.6 27 0.00091 23.2 4.7 40 2-45 58-97 (281)
284 2yjg_A Lactate racemase apopro 55.5 3.4 0.00012 29.5 0.0 45 2-46 276-322 (436)
285 1g60_A Adenine-specific methyl 48.3 7.6 0.00026 25.2 1.5 21 20-40 53-73 (260)
286 1cee_B Wiskott-aldrich syndrom 47.1 5.4 0.00019 20.2 0.5 19 76-94 35-53 (59)
287 2c71_A Glycoside hydrolase, fa 46.8 19 0.00065 22.7 3.2 30 13-42 127-157 (216)
288 2dky_A RHO-GTPase-activating p 46.7 6.2 0.00021 21.7 0.7 18 74-91 21-38 (91)
289 2lnh_A N-WAsp, neural wiskott- 46.5 7.8 0.00027 20.1 1.1 17 76-92 24-40 (65)
290 3lap_A Arginine repressor; arg 46.3 10 0.00035 23.5 1.8 23 70-92 31-53 (170)
291 4dcm_A Ribosomal RNA large sub 45.7 41 0.0014 23.2 4.9 38 2-42 100-137 (375)
292 3t9z_A GLNK3, nitrogen regulat 45.7 27 0.00093 20.1 3.5 28 15-42 65-96 (118)
293 3eld_A Methyltransferase; flav 45.2 22 0.00074 24.2 3.3 38 2-40 147-190 (300)
294 3ncq_A Nitrogen regulatory pro 45.2 28 0.00095 20.1 3.5 28 15-42 65-96 (119)
295 3fpn_A Geobacillus stearotherm 43.5 46 0.0016 19.2 5.7 47 21-93 7-53 (119)
296 3l7p_A Putative nitrogen regul 43.0 33 0.0011 19.6 3.5 27 15-41 68-98 (115)
297 4i8i_A Hypothetical protein; 5 43.0 70 0.0024 21.1 5.6 46 2-47 93-143 (271)
298 4aff_A Nitrogen regulatory pro 42.3 28 0.00097 19.9 3.2 27 15-41 65-95 (116)
299 1vfj_A Nitrogen regulatory pro 41.8 35 0.0012 19.3 3.5 26 16-41 66-95 (116)
300 3axs_A Probable N(2),N(2)-dime 41.7 22 0.00076 24.9 3.1 34 2-41 125-158 (392)
301 3mhy_A PII-like protein PZ; PI 41.5 27 0.00094 19.7 3.0 26 16-41 66-95 (112)
302 1eg2_A Modification methylase 40.9 13 0.00045 25.1 1.8 21 20-40 85-105 (319)
303 3gcz_A Polyprotein; flavivirus 40.8 8.1 0.00028 26.0 0.7 39 2-40 156-200 (282)
304 3v4g_A Arginine repressor; vib 40.6 19 0.00065 22.6 2.3 21 70-90 44-64 (180)
305 2dul_A N(2),N(2)-dimethylguano 40.1 16 0.00055 25.3 2.2 34 2-41 131-164 (378)
306 2ns1_B Nitrogen regulatory pro 39.4 30 0.001 19.6 3.0 27 16-42 70-100 (116)
307 1jdq_A TM006 protein, hypothet 39.2 49 0.0017 18.3 4.3 28 76-103 66-94 (98)
308 3ua3_A Protein arginine N-meth 38.5 27 0.00093 26.8 3.3 37 2-38 495-531 (745)
309 2fi0_A Conserved domain protei 38.3 23 0.00077 18.9 2.2 18 74-91 61-78 (81)
310 3ldg_A Putative uncharacterize 38.1 59 0.002 22.5 4.8 40 2-41 300-343 (384)
311 1wwu_A Hypothetical protein FL 38.1 21 0.00073 20.1 2.1 20 74-93 24-43 (99)
312 4dfc_B Uvrabc system protein A 37.9 60 0.0021 18.9 4.3 47 21-93 9-55 (126)
313 2jjq_A Uncharacterized RNA met 37.2 17 0.00058 25.6 1.9 34 2-40 353-386 (425)
314 1hwu_A PII protein; herbaspiri 37.1 44 0.0015 18.7 3.5 26 16-41 66-95 (112)
315 2eg2_A Nitrogen regulatory pro 36.9 45 0.0015 18.7 3.5 26 16-41 66-95 (112)
316 2pln_A HP1043, response regula 36.7 45 0.0016 18.3 3.5 31 2-41 62-93 (137)
317 2cc0_A Acetyl-xylan esterase; 36.5 27 0.00093 21.5 2.6 56 13-95 129-184 (195)
318 1f3m_A Serine/threonine-protei 35.7 20 0.00069 19.3 1.7 18 76-93 31-48 (80)
319 3dfe_A Putative PII-like signa 35.1 46 0.0016 18.9 3.3 27 16-42 69-97 (111)
320 3ouv_A Serine/threonine protei 35.1 43 0.0015 16.9 2.9 20 74-93 16-35 (71)
321 3ggo_A Prephenate dehydrogenas 34.4 67 0.0023 21.4 4.5 32 2-38 94-125 (314)
322 3ce8_A Putative PII-like nitro 34.4 54 0.0018 19.0 3.5 26 15-40 85-111 (120)
323 1ny1_A Probable polysaccharide 34.1 34 0.0012 21.9 2.9 30 12-41 168-200 (240)
324 3dm5_A SRP54, signal recogniti 33.8 62 0.0021 23.1 4.4 43 2-44 182-224 (443)
325 1ej5_A WAsp, wiskott-aldrich s 33.3 26 0.00089 20.0 2.0 18 76-93 23-40 (107)
326 4gqb_A Protein arginine N-meth 33.2 22 0.00076 26.7 2.1 36 2-37 428-463 (637)
327 3k0b_A Predicted N6-adenine-sp 33.1 25 0.00087 24.4 2.3 41 2-42 307-351 (393)
328 2g7j_A Putative cytoplasmic pr 32.9 42 0.0014 19.3 2.7 21 75-95 4-24 (124)
329 1x8d_A Hypothetical protein YI 32.6 67 0.0023 18.0 3.7 29 77-105 27-58 (104)
330 3bt7_A TRNA (uracil-5-)-methyl 32.3 11 0.00036 25.9 0.2 18 24-41 309-326 (369)
331 2gw8_A PII signal transduction 32.3 45 0.0015 18.8 2.9 27 16-42 68-98 (114)
332 2e8m_A Epidermal growth factor 31.9 17 0.00059 20.5 1.0 19 74-92 34-52 (99)
333 2gk3_A Putative cytoplasmic pr 31.5 25 0.00085 22.9 1.9 36 2-40 77-124 (256)
334 3lkd_A Type I restriction-modi 31.5 36 0.0012 24.9 2.9 20 22-41 338-358 (542)
335 2d8c_A Phosphatidylcholine:cer 31.3 19 0.00064 20.1 1.1 20 72-91 18-37 (97)
336 3rhf_A Putative polyphosphate 31.2 13 0.00046 25.0 0.6 68 20-94 118-185 (289)
337 1lfp_A Hypothetical protein AQ 31.2 81 0.0028 20.8 4.3 32 14-45 60-104 (249)
338 2lmc_A Bacterial RNA polymeras 30.9 60 0.0021 17.4 3.0 23 74-96 54-80 (84)
339 1b4a_A Arginine repressor; hel 30.6 36 0.0012 20.5 2.4 20 72-91 18-37 (149)
340 3kl4_A SRP54, signal recogniti 30.4 73 0.0025 22.6 4.3 43 2-44 179-223 (433)
341 2j13_A Polysaccharide deacetyl 30.1 32 0.0011 22.2 2.3 30 12-41 180-212 (247)
342 1yg0_A COP associated protein; 30.0 37 0.0013 15.7 2.1 16 75-90 50-65 (66)
343 3khk_A Type I restriction-modi 29.9 17 0.00057 26.6 0.9 19 22-40 376-394 (544)
344 2f3n_A SH3 and multiple ankyri 29.7 41 0.0014 17.5 2.3 18 74-91 5-22 (76)
345 3lvj_C Sulfurtransferase TUSA; 29.6 66 0.0023 16.9 3.4 53 20-101 23-75 (82)
346 3hz7_A Uncharacterized protein 29.6 58 0.002 17.5 3.0 26 76-101 42-67 (87)
347 2g5c_A Prephenate dehydrogenas 29.5 1.1E+02 0.0038 19.5 4.9 33 2-39 62-94 (281)
348 2o66_A PII protein; regulation 29.4 52 0.0018 19.4 2.9 27 16-42 79-109 (135)
349 3bzq_A Nitrogen regulatory pro 29.3 43 0.0015 18.8 2.5 26 16-41 68-97 (114)
350 2j9c_A GLNK1, hypothetical nit 29.1 47 0.0016 18.9 2.7 27 16-42 68-98 (119)
351 4ici_A Putative flavoprotein; 28.5 98 0.0033 18.5 4.2 26 2-27 87-113 (171)
352 1je3_A EC005, hypothetical 8.6 28.4 65 0.0022 17.8 3.1 26 77-102 68-93 (97)
353 3s1s_A Restriction endonucleas 28.2 53 0.0018 25.8 3.4 21 21-41 445-465 (878)
354 1pqw_A Polyketide synthase; ro 28.1 16 0.00055 22.2 0.5 22 22-43 118-139 (198)
355 2c1i_A Peptidoglycan glcnac de 27.7 30 0.001 24.6 1.9 28 14-41 359-386 (431)
356 1t0b_A THUA-like protein; treh 27.7 1.1E+02 0.0039 19.7 4.6 37 2-42 67-105 (252)
357 4dvj_A Putative zinc-dependent 27.5 43 0.0015 22.7 2.6 20 22-41 251-270 (363)
358 3bq7_A Diacylglycerol kinase d 27.4 46 0.0016 17.5 2.3 19 73-91 9-27 (81)
359 2z06_A Putative uncharacterize 27.0 18 0.00063 23.8 0.7 26 1-28 56-81 (252)
360 3a1y_A 50S ribosomal protein P 26.6 67 0.0023 16.0 2.6 22 70-91 13-34 (58)
361 3twe_A Alpha4H; unknown functi 26.5 31 0.0011 14.1 1.1 16 19-34 12-27 (27)
362 3g2e_A OORC subunit of 2-oxogl 26.4 41 0.0014 20.9 2.2 20 25-44 83-102 (194)
363 1dz3_A Stage 0 sporulation pro 26.3 84 0.0029 16.9 4.9 18 21-38 64-81 (130)
364 3hjh_A Transcription-repair-co 26.2 31 0.0011 24.8 1.8 31 70-100 132-162 (483)
365 4fpp_A Phosphotransferase; fou 25.7 64 0.0022 20.4 3.1 21 20-40 151-171 (247)
366 3k96_A Glycerol-3-phosphate de 25.6 1.1E+02 0.0039 20.8 4.5 34 2-40 99-132 (356)
367 3on3_A Keto/oxoacid ferredoxin 25.6 52 0.0018 20.2 2.6 22 24-45 82-103 (183)
368 2ibg_E Protein hedgehog, GH039 25.5 1.2E+02 0.004 18.4 4.7 57 31-91 78-135 (150)
369 1pl8_A Human sorbitol dehydrog 25.0 51 0.0017 22.2 2.6 21 22-42 254-274 (356)
370 2wk1_A NOVP; transferase, O-me 24.8 31 0.001 23.0 1.4 22 20-41 223-244 (282)
371 3m6i_A L-arabinitol 4-dehydrog 24.3 53 0.0018 22.0 2.6 21 22-42 264-284 (363)
372 3eul_A Possible nitrate/nitrit 24.2 1E+02 0.0035 17.2 4.7 35 2-40 61-95 (152)
373 1j8m_F SRP54, signal recogniti 24.0 1.3E+02 0.0044 19.9 4.5 42 2-43 180-223 (297)
374 2pv7_A T-protein [includes: ch 23.9 1.2E+02 0.0041 19.8 4.3 32 2-38 65-96 (298)
375 1x0v_A GPD-C, GPDH-C, glycerol 23.7 91 0.0031 20.7 3.7 34 2-40 90-123 (354)
376 3jte_A Response regulator rece 23.2 1E+02 0.0035 16.9 4.8 35 2-40 49-83 (143)
377 2qif_A Copper chaperone COPZ; 23.2 50 0.0017 15.2 1.8 17 74-90 51-67 (69)
378 1t70_A Phosphatase; crystal, X 23.1 18 0.0006 23.9 0.0 26 1-28 56-81 (255)
379 2w84_A Peroxisomal membrane pr 22.8 40 0.0014 17.7 1.4 18 70-87 43-60 (70)
380 1v3u_A Leukotriene B4 12- hydr 22.6 44 0.0015 22.1 1.9 21 23-43 226-246 (333)
381 2jso_A Polymyxin resistance pr 22.5 55 0.0019 17.8 1.9 18 70-87 68-85 (88)
382 2enj_A NPKC-theta, protein kin 22.5 83 0.0028 18.8 2.9 22 20-41 96-126 (138)
383 1zgz_A Torcad operon transcrip 22.4 97 0.0033 16.3 4.5 32 3-39 47-78 (122)
384 2r25_B Osmosensing histidine p 22.4 1.1E+02 0.0036 16.7 4.5 12 74-85 112-123 (133)
385 1j26_A Immature colon carcinom 22.4 1.1E+02 0.0037 17.5 3.3 26 14-39 55-80 (112)
386 1kon_A Protein YEBC, YEBC; alp 22.4 43 0.0015 22.1 1.7 14 32-45 94-107 (249)
387 3ilh_A Two component response 22.3 1.1E+02 0.0036 16.7 4.6 35 3-40 61-98 (146)
388 1yrk_A NPKC-delta, protein kin 22.2 78 0.0027 18.6 2.7 21 20-40 91-120 (126)
389 3r24_A NSP16, 2'-O-methyl tran 22.0 34 0.0012 23.6 1.2 21 20-40 196-216 (344)
390 3k7i_B IHH, HHG-2, indian hedg 21.9 1.6E+02 0.0053 18.5 5.1 57 32-92 107-164 (187)
391 1e3j_A NADP(H)-dependent ketos 21.8 64 0.0022 21.6 2.6 21 22-42 252-272 (352)
392 2cnq_A Phosphoribosylaminoimid 21.7 77 0.0026 21.5 2.9 45 35-91 227-275 (306)
393 1cc8_A Protein (metallochapero 21.7 82 0.0028 15.3 3.1 57 15-92 13-69 (73)
394 4e7p_A Response regulator; DNA 21.6 1.2E+02 0.004 16.9 4.7 35 2-40 66-100 (150)
395 4f3q_A Transcriptional regulat 21.5 32 0.0011 22.6 1.0 20 74-93 149-168 (247)
396 1yj8_A Glycerol-3-phosphate de 21.3 1.1E+02 0.0036 20.8 3.7 33 2-39 103-139 (375)
397 3hv2_A Response regulator/HD d 21.3 1.2E+02 0.0041 16.9 4.2 35 2-40 58-92 (153)
398 3iek_A Ribonuclease TTHA0252; 21.2 1.1E+02 0.0036 21.4 3.7 41 2-42 179-223 (431)
399 3n1g_B Desert hedgehog protein 21.1 1.6E+02 0.0054 18.2 5.2 78 17-99 81-162 (170)
400 2h1r_A Dimethyladenosine trans 20.9 85 0.0029 20.7 3.1 33 2-35 106-153 (299)
401 2hqr_A Putative transcriptiona 20.8 1.2E+02 0.0041 18.3 3.6 32 2-41 44-75 (223)
402 3beg_B Splicing factor, argini 20.8 1.2E+02 0.004 16.6 3.3 31 74-105 28-58 (115)
403 2f1k_A Prephenate dehydrogenas 20.6 1.7E+02 0.0059 18.5 4.5 31 3-38 58-88 (279)
404 3hwr_A 2-dehydropantoate 2-red 20.6 1.6E+02 0.0056 19.4 4.4 35 2-41 86-120 (318)
405 3jva_A Dipeptide epimerase; en 20.4 2E+02 0.0067 19.4 4.9 73 13-94 192-264 (354)
406 2lxi_A RNA-binding protein 10; 20.4 52 0.0018 17.3 1.6 20 74-93 13-32 (91)
407 3soz_A ORF 245 protein, cytopl 20.3 81 0.0028 20.6 2.8 36 2-41 70-118 (248)
408 3gt0_A Pyrroline-5-carboxylate 20.2 42 0.0014 21.3 1.4 31 3-38 64-94 (247)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.95 E-value=1.6e-27 Score=165.85 Aligned_cols=102 Identities=27% Similarity=0.389 Sum_probs=92.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
++|+|+++++||+|+|+++.++|++++++|+|||+++|+|.+.++++..+. ....+|+.|++.. +|++||.+||++
T Consensus 244 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~---~~~~~dl~ml~~~-~g~ert~~e~~~ 319 (353)
T 4a6d_A 244 EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPL---LTQLYSLNMLVQT-EGQERTPTHYHM 319 (353)
T ss_dssp CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH---HHHHHHHHHHHSS-SCCCCCHHHHHH
T ss_pred CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH---HHHHHHHHHHHhC-CCcCCCHHHHHH
Confidence 589999999999999999999999999999999999999999987655432 3356899998865 999999999999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
||++|||+.+++.++++..++|+++|
T Consensus 320 ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 320 LLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp HHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred HHHHCCCceEEEEEcCCceEEEEEEe
Confidence 99999999999999999999999998
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.90 E-value=1.9e-23 Score=145.81 Aligned_cols=105 Identities=39% Similarity=0.776 Sum_probs=91.4
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHH
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTAL 82 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 82 (107)
.|+|++++++|+|+|+++.++|++++++|+|||+++|+|.+.++.+..+...+....+|+.|+....+|+.||.+||+++
T Consensus 260 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~l 339 (364)
T 3p9c_A 260 GDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQAL 339 (364)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHH
T ss_pred CCEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHH
Confidence 39999999999999999999999999999999999999999887654332223335678888854458999999999999
Q ss_pred HHHcCCCceEEEEcCCceeEEEEEC
Q 042267 83 AIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 83 l~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
|+++||+.+++.++++..++||++|
T Consensus 340 l~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 340 ARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp HHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHCCCceEEEEEcCCceEEEEEeC
Confidence 9999999999999999999999997
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.89 E-value=1.1e-22 Score=142.06 Aligned_cols=105 Identities=44% Similarity=0.823 Sum_probs=91.4
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHH
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTAL 82 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 82 (107)
.|+|++++++|+|+|+++.++|++++++|+|||+++|+|.+.++.+..+........+++.|+....+|+.||.+||+++
T Consensus 262 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~l 341 (368)
T 3reo_A 262 GDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQAL 341 (368)
T ss_dssp CSEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHH
T ss_pred CCEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHH
Confidence 39999999999999999999999999999999999999999877654432233345678888765458999999999999
Q ss_pred HHHcCCCceEEEEcCCceeEEEEEC
Q 042267 83 AIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 83 l~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
|+++||+.+++.+..+..+++|++|
T Consensus 342 l~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 342 AMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp HHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 9999999999999988999999987
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.86 E-value=3.1e-21 Score=133.62 Aligned_cols=101 Identities=30% Similarity=0.472 Sum_probs=88.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+||+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++...+. ....+++.|+.. .+|+.||.+||++
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~----~~~~~d~~~~~~-~~~~~~t~~e~~~ 321 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH----QSKEMDFMMLAA-RTGQERTAAELEP 321 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC----HHHHHHHHHHHT-TSCCCCBHHHHHH
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc----hhhhcChhhhhc-CCCcCCCHHHHHH
Confidence 58999999999999999999999999999999999999999887653321 234677777765 4899999999999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+|+++||+.+++.+..+..++||++|
T Consensus 322 ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 322 LFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp HHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred HHHHCCCceEEEEECCCCcEEEEEEe
Confidence 99999999999999878899999986
No 5
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.85 E-value=4.4e-21 Score=131.92 Aligned_cols=97 Identities=27% Similarity=0.327 Sum_probs=84.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+||+|++++++|+|+|+++.++|++++++|+|||+++|.|.+.++. .+ ...+++.|+... +|+.||.+||++
T Consensus 235 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~------~~~~d~~~~~~~-~~~~~t~~e~~~ 306 (332)
T 3i53_A 235 GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HA------GTGMDLRMLTYF-GGKERSLAELGE 306 (332)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----C------CHHHHHHHHHHH-SCCCCCHHHHHH
T ss_pred CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-Cc------cHHHHHHHHhhC-CCCCCCHHHHHH
Confidence 5899999999999999999999999999999999999999987765 21 135777776653 899999999999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+|+++||+.+++.+.++ .++||++|
T Consensus 307 ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 307 LAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp HHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred HHHHCCCEEEEEEECCC-cEEEEEee
Confidence 99999999999999988 99999975
No 6
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.85 E-value=4.8e-21 Score=133.70 Aligned_cols=100 Identities=25% Similarity=0.486 Sum_probs=88.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+||+|++++++|+|+|+++.++|++++++|+|||+++|+|.+.++...+ . ...+++.|+... +|+.||.+||++
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~-~----~~~~d~~~~~~~-~g~~~t~~e~~~ 341 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAA-S----TLFVDLLLLVLV-GGAERSESEFAA 341 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCH-H----HHHHHHHHHHHH-SCCCBCHHHHHH
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCC-c----hhHhhHHHHhhc-CCccCCHHHHHH
Confidence 5899999999999999999999999999999999999999998765431 1 346777777654 899999999999
Q ss_pred HHHHcCCCceEEEE-cCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFEC-NVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~-~~~~~~vi~~~~ 107 (107)
+|+++||+.+++.+ ..+..++||++|
T Consensus 342 ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 342 LLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred HHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 99999999999999 578899999986
No 7
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.84 E-value=1e-20 Score=131.37 Aligned_cols=105 Identities=30% Similarity=0.551 Sum_probs=89.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCC---CCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPN---DGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKE 78 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~p---gg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e 78 (107)
+||+|+++++||+|+|+++.++|++++++|+| ||+++|+|.+.++....+........+++.|+... +|+.||.+|
T Consensus 251 ~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-~g~~~t~~e 329 (358)
T 1zg3_A 251 SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMF-LGKERTKQE 329 (358)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHH-SCCCEEHHH
T ss_pred CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccC-CCCCCCHHH
Confidence 48999999999999999999999999999999 99999999988765432111123456777777643 899999999
Q ss_pred HHHHHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 79 FTALAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 79 ~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
|+++|+++||+.+++.+.++..++||++|
T Consensus 330 ~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 330 WEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp HHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred HHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 99999999999999999888899999987
No 8
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.84 E-value=2.1e-20 Score=128.52 Aligned_cols=101 Identities=23% Similarity=0.365 Sum_probs=87.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+||+|++++++|+|+++++.++|++++++|+|||+++|.|...++...+ .....+++.|+... +|+.||.++|.+
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~t~~e~~~ 307 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPS----PMSVLWDVHLFMAC-AGRHRTTEEVVD 307 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCC----HHHHHHHHHHHHHH-SCCCCBHHHHHH
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc----chhHHhhhHhHhhC-CCcCCCHHHHHH
Confidence 5899999999999999999999999999999999999999987754322 12345677776644 789999999999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+++++||+.+++.+.++..++|+++|
T Consensus 308 ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 308 LLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred HHHHCCCceeEEEECCCCCEEEEEEe
Confidence 99999999999999888899999986
No 9
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.82 E-value=4.6e-20 Score=128.72 Aligned_cols=104 Identities=40% Similarity=0.675 Sum_probs=86.0
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHH
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTAL 82 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 82 (107)
+|+|++++++|+|+|+++.++|++++++|+|||+++|.|...++....+...+....+++.|+.. .+|+.||.++|+++
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~t~~e~~~l 346 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFIT-VGGRERTEKQYEKL 346 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHH-HSCCCEEHHHHHHH
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhc-cCCccCCHHHHHHH
Confidence 79999999999999999999999999999999999999998876543321111334677777653 37899999999999
Q ss_pred HHHcCCCceEEEEc-CCceeEEEEEC
Q 042267 83 AIEAGFKGINFECN-VCNSYVMEFYK 107 (107)
Q Consensus 83 l~~aGf~~~~~~~~-~~~~~vi~~~~ 107 (107)
|+++||+.+++.+. .+..++||++|
T Consensus 347 l~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 347 SKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 99999999999884 44259999987
No 10
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.82 E-value=7e-20 Score=126.95 Aligned_cols=104 Identities=28% Similarity=0.572 Sum_probs=87.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCC---CCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPN---DGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKE 78 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~p---gg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e 78 (107)
+||+|++++++|+|+|+++.++|++++++|+| ||+++|.|...++....+........+++.|+. . +|+.||.++
T Consensus 246 ~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~-~g~~~t~~e 323 (352)
T 1fp2_A 246 NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-NGKERNEEE 323 (352)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-TCCCEEHHH
T ss_pred CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c-cCCCCCHHH
Confidence 48999999999999999999999999999999 999999999887654321111233456777765 3 588999999
Q ss_pred HHHHHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 79 FTALAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 79 ~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
|+++|+++||+.+++.+.++..++||++|
T Consensus 324 ~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 324 WKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp HHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 99999999999999998888899999987
No 11
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.80 E-value=3.6e-19 Score=123.04 Aligned_cols=101 Identities=13% Similarity=0.152 Sum_probs=85.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+||+|++++++|+|+|+++.++|++++++|+|||+++|+|.+.++....+. ....+++.|+....+|+.||.++|++
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~t~~e~~~ 324 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPA---LSADFSLHMMVNTNHGELHPTPWIAG 324 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSH---HHHHHHHHHHHHSTTCCCCCHHHHHH
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCc---hHHHhhHHHHhhCCCCCcCCHHHHHH
Confidence 599999999999999999999999999999999999999999876643321 23467777776555799999999999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+|+++||+.++.. .+..++++++|
T Consensus 325 ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 325 VVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp HHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred HHHHCCCceeeec--cCceEEEEEec
Confidence 9999999998843 35688888875
No 12
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.80 E-value=1.2e-19 Score=126.38 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=82.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchh-hhhhhhhcHHHHhhCCCceecCHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA-SRDSFILDAIFLIQIPHGRERTKKEFT 80 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~rt~~e~~ 80 (107)
+||+|++++++|+|+|+++.++|++++++|+|||+++|+|.+.++....+.. .......++.++. ..+++.||.+||+
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~e~~ 326 (363)
T 3dp7_A 248 GFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMA-NGNSKMFHSDDLI 326 (363)
T ss_dssp CCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSS-CSSCCSCCHHHHH
T ss_pred CcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhh-CCCCcccCHHHHH
Confidence 5899999999999999999999999999999999999999888765422110 0011123333333 3367899999999
Q ss_pred HHHHHcCCCceEEEEcC-CceeEEEEEC
Q 042267 81 ALAIEAGFKGINFECNV-CNSYVMEFYK 107 (107)
Q Consensus 81 ~ll~~aGf~~~~~~~~~-~~~~vi~~~~ 107 (107)
++|+++||+.+++.+.. ..+++|+++|
T Consensus 327 ~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 327 RCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp HHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred HHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 99999999999998764 5599999875
No 13
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.77 E-value=3.4e-18 Score=117.22 Aligned_cols=102 Identities=24% Similarity=0.326 Sum_probs=86.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+||+|++++++|+|+++++.++|++++++|+|||+++++|...++.+..+. ....+++.|+....+++.+|.++|.+
T Consensus 232 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~t~~~~~~ 308 (335)
T 2r3s_A 232 DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPP---DAAAFSLVMLATTPNGDAYTFAEYES 308 (335)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSH---HHHHHHHHHHHHSSSCCCCCHHHHHH
T ss_pred CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCch---HHHHHHHHHHeeCCCCCcCCHHHHHH
Confidence 489999999999999999999999999999999999999988775543221 23456777766555789999999999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEE
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFY 106 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~ 106 (107)
+++++||+.+++.+.++..++++++
T Consensus 309 ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 309 MFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp HHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred HHHHCCCCeeeEEECCCCceeEEEe
Confidence 9999999999999888777877764
No 14
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.76 E-value=1.6e-18 Score=120.07 Aligned_cols=101 Identities=25% Similarity=0.344 Sum_probs=84.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeee-CCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINST-LPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFT 80 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~ 80 (107)
+||+|++++++|+|+++++.++|++++++|+|||++++.|.. .++.... . ....+++.|+... +|+.+|.++|.
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~-~---~~~~~~~~~~~~~-~~~~~t~~e~~ 323 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFN-E---QFTELDLRMLVFL-GGALRTREKWD 323 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS-H---HHHHHHHHHHHHH-SCCCCBHHHHH
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc-c---hhhhccHHHhhhc-CCcCCCHHHHH
Confidence 489999999999999999999999999999999999999988 6544322 1 2335666666544 78999999999
Q ss_pred HHHHHcCCCceEEEEcCCc-----eeEEEEEC
Q 042267 81 ALAIEAGFKGINFECNVCN-----SYVMEFYK 107 (107)
Q Consensus 81 ~ll~~aGf~~~~~~~~~~~-----~~vi~~~~ 107 (107)
++|+++||+.+++.+.++. .++|+++|
T Consensus 324 ~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 324 GLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred HHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 9999999999999887655 89999875
No 15
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.74 E-value=4e-18 Score=118.56 Aligned_cols=101 Identities=30% Similarity=0.436 Sum_probs=81.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee--eCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS--TLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEF 79 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~ 79 (107)
+||+|++++++|+|+++++.++|++++++|+|||+++|.|. +.++... + .....+++.|+... +|+.++.++|
T Consensus 248 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~-~---~~~~~~~~~~~~~~-~~~~~~~~~~ 322 (374)
T 1qzz_A 248 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD-R---FFSTLLDLRMLTFM-GGRVRTRDEV 322 (374)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH--------H---HHHHHHHHHHHHHH-SCCCCCHHHH
T ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC-c---chhhhcchHHHHhC-CCcCCCHHHH
Confidence 48999999999999999999999999999999999999998 7654422 1 12345666666544 7899999999
Q ss_pred HHHHHHcCCCceEEEEcCCce-----eEEEEEC
Q 042267 80 TALAIEAGFKGINFECNVCNS-----YVMEFYK 107 (107)
Q Consensus 80 ~~ll~~aGf~~~~~~~~~~~~-----~vi~~~~ 107 (107)
.++|+++||+.+++.+.++.. ++|+++|
T Consensus 323 ~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 323 VDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp HHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred HHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 999999999999999887776 9999875
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.72 E-value=5.6e-17 Score=112.53 Aligned_cols=99 Identities=7% Similarity=0.263 Sum_probs=80.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCcee----cCHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRE----RTKK 77 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----rt~~ 77 (107)
++|+|++++++|+|+|+++.++|++++++|+|||+++|+|...++. ..+. ....+ .|+....+|+. ++.+
T Consensus 256 ~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~---~~~~~--~~~~~~~~g~~~~~~~t~~ 329 (359)
T 1x19_A 256 EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP-ENPN---FDYLS--HYILGAGMPFSVLGFKEQA 329 (359)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT-TSCC---HHHHH--HHGGGGGSSCCCCCCCCGG
T ss_pred CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC-CCch---HHHHH--HHHHhcCCCCcccCCCCHH
Confidence 3599999999999999999999999999999999999999987755 2221 11222 33332335777 9999
Q ss_pred HHHHHHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 78 EFTALAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 78 e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+|.++|+++||+.+++.+.+ ..++++++|
T Consensus 330 e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 330 RYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp GHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred HHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 99999999999999998887 889999986
No 17
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.42 E-value=1.2e-12 Score=85.31 Aligned_cols=104 Identities=14% Similarity=0.136 Sum_probs=74.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHH-------------hhC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFL-------------IQI 68 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 68 (107)
.||+|++.+++|++++++..++|+++++.|+|||++++.+...++...... .....+..... ...
T Consensus 109 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (234)
T 3dtn_A 109 KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIEN--LNKTIWRQYVENSGLTEEEIAAGYERS 186 (234)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHH--HHHHHHHHHHHTSSCCHHHHHTTC---
T ss_pred CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhh--HHHHHHHHHHHhcCCCHHHHHHHHHhc
Confidence 589999999999999988889999999999999999999987654321100 00000100000 000
Q ss_pred CCceecCHHHHHHHHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 69 PHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 69 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
.....++.+++.++|++|||+.+++......++++..+|
T Consensus 187 ~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~ 225 (234)
T 3dtn_A 187 KLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRK 225 (234)
T ss_dssp -CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred ccccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEe
Confidence 123457889999999999999999987777777776654
No 18
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.39 E-value=3.3e-12 Score=85.57 Aligned_cols=104 Identities=14% Similarity=0.047 Sum_probs=70.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhh-hcHHHH-hhC-----------
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFI-LDAIFL-IQI----------- 68 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~-~~~~~~-~~~----------- 68 (107)
++|++++..++|++++++..++|++++++|+|||++++.|...++++.... ..... .+.... ...
T Consensus 139 ~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~--~~~~~~~~~~~~~g~s~~ei~~~~~~l 216 (261)
T 4gek_A 139 NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGE--LLFNMHHDFKRANGYSELEISQKRSML 216 (261)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHH--HHHHHHHHHHHHTTGGGSTTHHHHHHH
T ss_pred ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHH--HHHHHHHHHHHHcCCCHHHHHHHHhhh
Confidence 589999999999999988889999999999999999999988765432110 00000 000000 000
Q ss_pred -CCceecCHHHHHHHHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 69 -PHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 69 -~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
..-...|.+++.++|+++||+.++++.-...+..+.++|
T Consensus 217 ~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 217 ENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp HHHCCCBCHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred cccccCCCHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 001236889999999999999998764333444455554
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.29 E-value=2.5e-11 Score=78.29 Aligned_cols=87 Identities=10% Similarity=0.043 Sum_probs=69.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++ ...+|+++++.|+|||++++.+.........+. ....++.++|.+
T Consensus 106 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 166 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSE--PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPP-----------------PEEVYSEWEVGL 166 (219)
T ss_dssp CEEEEEEESCGGGCSS--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCC-----------------GGGSCCHHHHHH
T ss_pred CeeEEEeehhhhhcCC--HHHHHHHHHHHhCCCeEEEEEEecccccccCCc-----------------hhcccCHHHHHH
Confidence 5899999999999987 479999999999999999999877654322110 112357899999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+++++||+.+++...++....+.++|
T Consensus 167 ~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 167 ILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 99999999999988877766666654
No 20
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.21 E-value=5.6e-11 Score=78.13 Aligned_cols=82 Identities=17% Similarity=0.305 Sum_probs=65.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++++..++|+++++.|+|||++++.+........ ..+. ......++.++|.+
T Consensus 158 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---------~~~~-----~~~~~~~~~~~~~~ 223 (254)
T 1xtp_A 158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF---------LVDK-----EDSSLTRSDIHYKR 223 (254)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---------EEET-----TTTEEEBCHHHHHH
T ss_pred CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---------eecc-----cCCcccCCHHHHHH
Confidence 589999999999999988999999999999999999999975432210 1110 11344689999999
Q ss_pred HHHHcCCCceEEEEcC
Q 042267 82 LAIEAGFKGINFECNV 97 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~ 97 (107)
+|+++||+++++....
T Consensus 224 ~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 224 LFNESGVRVVKEAFQE 239 (254)
T ss_dssp HHHHHTCCEEEEEECT
T ss_pred HHHHCCCEEEEeeecC
Confidence 9999999999887653
No 21
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.19 E-value=8.5e-11 Score=77.07 Aligned_cols=81 Identities=20% Similarity=0.344 Sum_probs=66.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++++...+|+++++.|+|||++++.++..+. .. .++. ..+...++.++|.+
T Consensus 146 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---~~-------~~~~-----~~~~~~~~~~~~~~ 210 (241)
T 2ex4_A 146 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE---GV-------ILDD-----VDSSVCRDLDVVRR 210 (241)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS---SE-------EEET-----TTTEEEEBHHHHHH
T ss_pred CEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC---cc-------eecc-----cCCcccCCHHHHHH
Confidence 589999999999999988889999999999999999999987654 11 1111 11445679999999
Q ss_pred HHHHcCCCceEEEEcC
Q 042267 82 LAIEAGFKGINFECNV 97 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~ 97 (107)
+|+++||+++++....
T Consensus 211 ~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 211 IICSAGLSLLAEERQE 226 (241)
T ss_dssp HHHHTTCCEEEEEECC
T ss_pred HHHHcCCeEEEeeecC
Confidence 9999999999887653
No 22
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.19 E-value=5.7e-11 Score=76.31 Aligned_cols=90 Identities=17% Similarity=0.110 Sum_probs=60.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCce-------ec
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGR-------ER 74 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------~r 74 (107)
.||+|++.+++|++++++...+|+++++.|+|||++++.+...+...............-.. . ...+. ..
T Consensus 107 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~ 183 (218)
T 3ou2_A 107 QWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRR-T--LQDGRSFRIVKVFR 183 (218)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEE-E--CTTSCEEEEECCCC
T ss_pred ceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceee-e--cCCcchhhHhhcCC
Confidence 68999999999999998889999999999999999999997654322110000000000000 0 11222 34
Q ss_pred CHHHHHHHHHHcCCCceEEE
Q 042267 75 TKKEFTALAIEAGFKGINFE 94 (107)
Q Consensus 75 t~~e~~~ll~~aGf~~~~~~ 94 (107)
+.++|.++|+++||++....
T Consensus 184 ~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 184 SPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp CHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEeee
Confidence 99999999999999954443
No 23
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.19 E-value=2.3e-10 Score=76.66 Aligned_cols=95 Identities=18% Similarity=0.109 Sum_probs=67.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCC-----CchhhhhhhhhcHHHHhhCCCceecCH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPD-----STEASRDSFILDAIFLIQIPHGRERTK 76 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~rt~ 76 (107)
.||+|++..++|++++++...+|+++++.|+|||++++.+...+.... .+.........+.......+++...+.
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 208 (287)
T 1kpg_A 129 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSI 208 (287)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCH
T ss_pred CeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCH
Confidence 589999999999998777899999999999999999999987643211 000000001111111112346778899
Q ss_pred HHHHHHHHHcCCCceEEEEc
Q 042267 77 KEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 77 ~e~~~ll~~aGf~~~~~~~~ 96 (107)
+++.++++++||+++++...
T Consensus 209 ~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 209 PMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp HHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHhCCcEEEEEEeC
Confidence 99999999999999988764
No 24
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.18 E-value=6.5e-11 Score=73.67 Aligned_cols=84 Identities=13% Similarity=0.158 Sum_probs=66.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++ ...+++++++.|+|||++++.+.........++ ....++.++|.+
T Consensus 75 ~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 135 (170)
T 3i9f_A 75 SVDFILFANSFHDMDD--KQHVISEVKRILKDDGRVIIIDWRKENTGIGPP-----------------LSIRMDEKDYMG 135 (170)
T ss_dssp CEEEEEEESCSTTCSC--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSC-----------------GGGCCCHHHHHH
T ss_pred ceEEEEEccchhcccC--HHHHHHHHHHhcCCCCEEEEEEcCccccccCch-----------------HhhhcCHHHHHH
Confidence 5899999999999987 479999999999999999999877554332211 112368999999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEE
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFY 106 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~ 106 (107)
+++ ||+.++....+.....+.++
T Consensus 136 ~l~--Gf~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 136 WFS--NFVVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp HTT--TEEEEEEECSSTTEEEEEEE
T ss_pred HHh--CcEEEEccCCCCceEEEEEe
Confidence 998 99999999887776666654
No 25
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.18 E-value=2.1e-10 Score=73.99 Aligned_cols=104 Identities=11% Similarity=0.090 Sum_probs=66.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhh-CCCceecCHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQ-IPHGRERTKKEFT 80 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~rt~~e~~ 80 (107)
.||+|++.+++|++++++...+|+++++.|+|||.+++.++..+...................... .......+.++|.
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (220)
T 3hnr_A 106 SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQ 185 (220)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHH
T ss_pred CeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHH
Confidence 689999999999999988788999999999999999999876543211000000000000000000 0011235889999
Q ss_pred HHHHHcCCCceEEEEcCCceeEEEEE
Q 042267 81 ALAIEAGFKGINFECNVCNSYVMEFY 106 (107)
Q Consensus 81 ~ll~~aGf~~~~~~~~~~~~~vi~~~ 106 (107)
++|+++||+++.+.. ....-++...
T Consensus 186 ~~l~~aGf~v~~~~~-~~~~w~~~~~ 210 (220)
T 3hnr_A 186 TIFENNGFHVTFTRL-NHFVWVMEAT 210 (220)
T ss_dssp HHHHHTTEEEEEEEC-SSSEEEEEEE
T ss_pred HHHHHCCCEEEEeec-cceEEEEeeh
Confidence 999999998776543 3455455443
No 26
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=1.1e-10 Score=74.46 Aligned_cols=89 Identities=11% Similarity=0.033 Sum_probs=67.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++++..++|+++++.|+|||++++.+...+... . + .. . ......++.++|.+
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~---~---~---~~---~--~~~~~~~~~~~~~~ 167 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLE---P---M---YH---P--VATAYRWPLPELAQ 167 (203)
T ss_dssp CEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCE---E---E---CC---S--SSCEEECCHHHHHH
T ss_pred CeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchh---h---h---hc---h--hhhhccCCHHHHHH
Confidence 58999999999999977789999999999999999999876543211 0 0 00 0 11345688999999
Q ss_pred HHHHcCCCceEEEEcC-CceeEEE
Q 042267 82 LAIEAGFKGINFECNV-CNSYVME 104 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~-~~~~vi~ 104 (107)
+|+++||+++++...+ .++..+.
T Consensus 168 ~l~~~Gf~~~~~~~~~~~p~~~l~ 191 (203)
T 3h2b_A 168 ALETAGFQVTSSHWDPRFPHAYLT 191 (203)
T ss_dssp HHHHTTEEEEEEEECTTSSEEEEE
T ss_pred HHHHCCCcEEEEEecCCCcchhhh
Confidence 9999999999987764 3444443
No 27
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.15 E-value=2.4e-11 Score=80.59 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=69.2
Q ss_pred ceeEEEecc-cccCCCh-HHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhh---------h-----------hhh
Q 042267 2 QVYLSILQW-MLHNFDD-ENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASR---------D-----------SFI 59 (107)
Q Consensus 2 ~~D~v~~~~-vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~---------~-----------~~~ 59 (107)
.||+|++.. ++|++++ ++..++|+++++.|+|||++++.+...++......... . ...
T Consensus 110 ~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATR 189 (263)
T ss_dssp CEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEE
T ss_pred CcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEE
Confidence 589999998 9999975 56789999999999999999987554443221100000 0 000
Q ss_pred hcHHHHhhCCC-----------ceecCHHHHHHHHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 60 LDAIFLIQIPH-----------GRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 60 ~~~~~~~~~~~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+++.......+ .+.+|.+||.++|+++||+++++........++.++|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 190 IEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 11111100011 2236899999999999999998866656666676654
No 28
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.14 E-value=1.7e-10 Score=76.12 Aligned_cols=87 Identities=17% Similarity=0.172 Sum_probs=66.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++++...+|+++++.|+|||++++.++..+....... .+.-... ..+...++.++|.+
T Consensus 120 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~ 191 (266)
T 3ujc_A 120 NFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDD------EFKEYVK--QRKYTLITVEEYAD 191 (266)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCH------HHHHHHH--HHTCCCCCHHHHHH
T ss_pred cEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchH------HHHHHHh--cCCCCCCCHHHHHH
Confidence 589999999999998888999999999999999999999987654211110 1111111 11344679999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+++++||+.+++...
T Consensus 192 ~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 192 ILTACNFKNVVSKDL 206 (266)
T ss_dssp HHHHTTCEEEEEEEC
T ss_pred HHHHcCCeEEEEEeC
Confidence 999999999988765
No 29
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.14 E-value=2.9e-11 Score=78.78 Aligned_cols=106 Identities=14% Similarity=0.075 Sum_probs=68.1
Q ss_pred ceeEEE-ecccccCCCh-HHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchh------------hh--------hhhh
Q 042267 2 QVYLSI-LQWMLHNFDD-ENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA------------SR--------DSFI 59 (107)
Q Consensus 2 ~~D~v~-~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~------------~~--------~~~~ 59 (107)
.||+|+ ..+++|+.++ ++..++|+++++.|+|||++++.+...++...+... .. ....
T Consensus 100 ~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (239)
T 3bxo_A 100 KFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATR 179 (239)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEE
T ss_pred CCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEE
Confidence 589999 5668988854 668999999999999999999987665443211000 00 0000
Q ss_pred hcHHHHhhCCCc-----------eecCHHHHHHHHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 60 LDAIFLIQIPHG-----------RERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 60 ~~~~~~~~~~~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
.....+....++ +.+|.++|+++|+++||++..+....+...++.++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 180 MEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 011111101121 346899999999999997766654456678888765
No 30
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.14 E-value=1.6e-11 Score=78.73 Aligned_cols=95 Identities=13% Similarity=0.038 Sum_probs=62.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhh-hhh-hcHHHHhhCCCceecCHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRD-SFI-LDAIFLIQIPHGRERTKKEF 79 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~g~~rt~~e~ 79 (107)
.||+|++.+++|++++ ..++|+++++.|+|||++++.+...+... ....... ... ....... ......++.++|
T Consensus 111 ~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 186 (219)
T 3dlc_A 111 YADLIVSRGSVFFWED--VATAFREIYRILKSGGKTYIGGGFGNKEL-RDSISAEMIRKNPDWKEFN-RKNISQENVERF 186 (219)
T ss_dssp CEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEECCSSHHH-HHHHHHHHHHHCTTHHHHH-HHHSSHHHHHHH
T ss_pred cccEEEECchHhhccC--HHHHHHHHHHhCCCCCEEEEEeccCcHHH-HHHHHHHHHHhHHHHHhhh-hhccccCCHHHH
Confidence 5899999999999977 57899999999999999999875533211 0000000 000 0000000 012334678999
Q ss_pred HHHHHHcCCCceEEEEcCCce
Q 042267 80 TALAIEAGFKGINFECNVCNS 100 (107)
Q Consensus 80 ~~ll~~aGf~~~~~~~~~~~~ 100 (107)
.++|+++||+.+++.......
T Consensus 187 ~~~l~~aGf~~v~~~~~~~~~ 207 (219)
T 3dlc_A 187 QNVLDEIGISSYEIILGDEGF 207 (219)
T ss_dssp HHHHHHHTCSSEEEEEETTEE
T ss_pred HHHHHHcCCCeEEEEecCCce
Confidence 999999999999988765443
No 31
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.11 E-value=2.2e-10 Score=74.73 Aligned_cols=77 Identities=16% Similarity=0.212 Sum_probs=62.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+...++|++++++..++++++++.|+|||++++.++........++ ...+.++|.+
T Consensus 132 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-------------------~~~~~~~~~~ 192 (235)
T 3lcc_A 132 LFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPP-------------------YKVDVSTFEE 192 (235)
T ss_dssp CEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSS-------------------CCCCHHHHHH
T ss_pred CeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCC-------------------ccCCHHHHHH
Confidence 589999999999999888899999999999999999998865443222110 1157899999
Q ss_pred HHHHcCCCceEEEEcC
Q 042267 82 LAIEAGFKGINFECNV 97 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~ 97 (107)
+|+++||+++++...+
T Consensus 193 ~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 193 VLVPIGFKAVSVEENP 208 (235)
T ss_dssp HHGGGTEEEEEEEECT
T ss_pred HHHHcCCeEEEEEecC
Confidence 9999999999887653
No 32
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.10 E-value=1.4e-10 Score=76.75 Aligned_cols=88 Identities=18% Similarity=0.297 Sum_probs=63.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+...++|+++|. ..+|+++++.|+|||++++.+...++.+ ......... ...........++.++|.+
T Consensus 103 ~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 175 (260)
T 1vl5_A 103 RFHIVTCRIAAHHFPNP--ASFVSEAYRVLKKGGQLLLVDNSAPEND---AFDVFYNYV--EKERDYSHHRAWKKSDWLK 175 (260)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEBCSSH---HHHHHHHHH--HHHHCTTCCCCCBHHHHHH
T ss_pred CEEEEEEhhhhHhcCCH--HHHHHHHHHHcCCCCEEEEEEcCCCCCH---HHHHHHHHH--HHhcCccccCCCCHHHHHH
Confidence 58999999999999985 6999999999999999999998765432 111111111 1111111345688999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+|+++||+.+++...
T Consensus 176 ~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 176 MLEEAGFELEELHCF 190 (260)
T ss_dssp HHHHHTCEEEEEEEE
T ss_pred HHHHCCCeEEEEEEe
Confidence 999999998876543
No 33
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.10 E-value=7.1e-10 Score=75.40 Aligned_cols=95 Identities=19% Similarity=0.232 Sum_probs=67.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCc----hhh-hhhhhhcHHHHhhCCCceecCH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDST----EAS-RDSFILDAIFLIQIPHGRERTK 76 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~g~~rt~ 76 (107)
.||+|+...++|++++++..++|+++++.|+|||++++.++..+...... +.. ......+.......+++...+.
T Consensus 155 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 234 (318)
T 2fk8_A 155 PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPST 234 (318)
T ss_dssp CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCH
T ss_pred CcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCH
Confidence 58999999999999887789999999999999999999998765321100 000 0000011111111346778899
Q ss_pred HHHHHHHHHcCCCceEEEEc
Q 042267 77 KEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 77 ~e~~~ll~~aGf~~~~~~~~ 96 (107)
+++.++++++||+++++...
T Consensus 235 ~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 235 EMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp HHHHHHHHHTTCBCCCCEEC
T ss_pred HHHHHHHHhCCCEEEEEEec
Confidence 99999999999999887654
No 34
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.09 E-value=5.5e-10 Score=75.72 Aligned_cols=106 Identities=19% Similarity=0.116 Sum_probs=68.3
Q ss_pred ceeEEEecccccCCChHH-HHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchh-h--hhh----hhhcHHHHhhCCCc--
Q 042267 2 QVYLSILQWMLHNFDDEN-CIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA-S--RDS----FILDAIFLIQIPHG-- 71 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~-~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~-~--~~~----~~~~~~~~~~~~~g-- 71 (107)
.||+|++..++|++++.+ ..++++++++.|+|||++++.+...+........ . ... .............+
T Consensus 187 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (305)
T 3ocj_A 187 GYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWN 266 (305)
T ss_dssp CEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCC
T ss_pred CeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhh
Confidence 689999999999997644 5679999999999999999988665433221100 0 000 00000000001011
Q ss_pred eecCHHHHHHHHHHcCCCceEEEEcC-CceeEEEEEC
Q 042267 72 RERTKKEFTALAIEAGFKGINFECNV-CNSYVMEFYK 107 (107)
Q Consensus 72 ~~rt~~e~~~ll~~aGf~~~~~~~~~-~~~~vi~~~~ 107 (107)
..++.+++.++|+++||+++++.... .....+.++|
T Consensus 267 ~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 267 ALRTHAQTRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred ccCCHHHHHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 34799999999999999999887653 4445555544
No 35
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.09 E-value=3.3e-10 Score=72.76 Aligned_cols=80 Identities=14% Similarity=0.068 Sum_probs=61.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++++...+|+++++.|+|||++++......... .. .. ...-..++.++|.+
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~-------~~-------~~~~~~~~~~~~~~ 166 (211)
T 3e23_A 102 AYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEG-RD-------KL-------ARYYNYPSEEWLRA 166 (211)
T ss_dssp CEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCE-EC-------TT-------SCEECCCCHHHHHH
T ss_pred cEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccc-cc-------cc-------chhccCCCHHHHHH
Confidence 58999999999999988899999999999999999999754332111 00 00 00122468999999
Q ss_pred HHHHcC-CCceEEEEc
Q 042267 82 LAIEAG-FKGINFECN 96 (107)
Q Consensus 82 ll~~aG-f~~~~~~~~ 96 (107)
+|+++| |+++++...
T Consensus 167 ~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 167 RYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHHHCCCSEEEEEEE
T ss_pred HHHhCCCcEEEEEEec
Confidence 999999 999887643
No 36
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.09 E-value=3.2e-10 Score=74.38 Aligned_cols=88 Identities=22% Similarity=0.252 Sum_probs=63.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|+++| ...+|+++++.|+|||++++.+...++.+ ....+.... ...........++.++|.+
T Consensus 87 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 159 (239)
T 1xxl_A 87 SFDIITCRYAAHHFSD--VRKAVREVARVLKQDGRFLLVDHYAPEDP---VLDEFVNHL--NRLRDPSHVRESSLSEWQA 159 (239)
T ss_dssp CEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECBCSSH---HHHHHHHHH--HHHHCTTCCCCCBHHHHHH
T ss_pred cEEEEEECCchhhccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCCh---hHHHHHHHH--HHhccccccCCCCHHHHHH
Confidence 5899999999999987 47899999999999999999998765431 111111111 1111112345689999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+|+++||+.+++...
T Consensus 160 ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 160 MFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHCCCcEEEEEee
Confidence 999999998876543
No 37
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.08 E-value=3.8e-11 Score=77.68 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=68.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCC--ch-hhhhhhhhcHHHHhhC----------
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDS--TE-ASRDSFILDAIFLIQI---------- 68 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~--~~-~~~~~~~~~~~~~~~~---------- 68 (107)
.||+|++..++|.+..++..++++++++.|+|||++++.++..+..... .. .......... .....
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 181 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISK-VIPDQEERTVVIEFK 181 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCE-EEEETTTTEEEEEC-
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecc-cccCccccEEEEEec
Confidence 5899999999888887778999999999999999999988653211000 00 0000000000 00000
Q ss_pred C-------CceecCHHHHHHHHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 69 P-------HGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 69 ~-------~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
. .....+ .+|.++|+++||+.+++.+++....+++++|
T Consensus 182 ~~~~~~~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 182 SEQDSFRVRFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp ----CCEEEEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred cchhhheeehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 0 011122 4899999999999999999987889999876
No 38
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.08 E-value=7.3e-10 Score=72.56 Aligned_cols=85 Identities=11% Similarity=0.212 Sum_probs=63.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++++...+|+++++.|+|||++++..+... . .. . ..+.. .. .......+.+++.+
T Consensus 101 ~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~----~~-~---~~~~~-~~-~~~~~~~~~~~l~~ 169 (240)
T 3dli_A 101 YLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPT-S----LY-S---LINFY-ID-PTHKKPVHPETLKF 169 (240)
T ss_dssp CBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTT-S----HH-H---HHHHT-TS-TTCCSCCCHHHHHH
T ss_pred CeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcc-h----hH-H---HHHHh-cC-ccccccCCHHHHHH
Confidence 58999999999999988889999999999999999998765421 1 00 0 11100 10 11345688999999
Q ss_pred HHHHcCCCceEEEEcC
Q 042267 82 LAIEAGFKGINFECNV 97 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~ 97 (107)
+++++||+++++....
T Consensus 170 ~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 170 ILEYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHCCCeEEEEEEec
Confidence 9999999998876553
No 39
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.07 E-value=5.2e-10 Score=74.33 Aligned_cols=88 Identities=15% Similarity=-0.011 Sum_probs=65.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++..++|++++. .++|+++++.|+|||++++.+......... .. . ..++..... ...+...+.++|.+
T Consensus 129 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-~~-~--~~~~~~~~~-~~~~~~~~~~~~~~ 201 (273)
T 3bus_A 129 SFDAVWALESLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEG-AK-K--EAVDAFRAG-GGVLSLGGIDEYES 201 (273)
T ss_dssp CEEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCH-HH-H--HHHHHHHHH-HTCCCCCCHHHHHH
T ss_pred CccEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCCh-hH-H--HHHHHHHhh-cCccCCCCHHHHHH
Confidence 58999999999999875 799999999999999999999876533211 10 0 111111111 12566789999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+++++||+++++...
T Consensus 202 ~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 202 DVRQAELVVTSTVDI 216 (273)
T ss_dssp HHHHTTCEEEEEEEC
T ss_pred HHHHcCCeEEEEEEC
Confidence 999999999887765
No 40
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.06 E-value=6.4e-10 Score=74.84 Aligned_cols=85 Identities=16% Similarity=0.156 Sum_probs=63.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++..++|++++ ..++|+++++.|+|||++++.++..+....... ....+.. . . .....+.++|.+
T Consensus 150 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~---~~~~~~~--~--~-~~~~~~~~~~~~ 219 (297)
T 2o57_A 150 SYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSS---IQPILDR--I--K-LHDMGSLGLYRS 219 (297)
T ss_dssp CEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGG---GHHHHHH--H--T-CSSCCCHHHHHH
T ss_pred CEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHH---HHHHHHH--h--c-CCCCCCHHHHHH
Confidence 5899999999999998 589999999999999999999987654432111 1111111 1 1 223468999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+++++||+++++...
T Consensus 220 ~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 220 LAKECGLVTLRTFSR 234 (297)
T ss_dssp HHHHTTEEEEEEEEC
T ss_pred HHHHCCCeEEEEEEC
Confidence 999999999988764
No 41
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.05 E-value=8.7e-10 Score=71.37 Aligned_cols=90 Identities=14% Similarity=0.164 Sum_probs=62.6
Q ss_pred ceeEEEecccccCCChH-HHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCC-----------
Q 042267 2 QVYLSILQWMLHNFDDE-NCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIP----------- 69 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 69 (107)
.||+|++..++|++++. +..++|+++++.|+|||++++.++..+... +.. ............ ..
T Consensus 101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~ 176 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL--KLY-RKRYLHDFPITK-EEGSFLARDPETG 176 (235)
T ss_dssp CEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS--HHH-HHHHHHHHHHHC-STTEEEEECTTTC
T ss_pred ceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhH--HHH-HHHhhhhccchh-hhcceEecccccC
Confidence 58999999999999864 466999999999999999999987653221 111 111111111110 00
Q ss_pred ----CceecCHHHHHHHHHHcCCCceEEEE
Q 042267 70 ----HGRERTKKEFTALAIEAGFKGINFEC 95 (107)
Q Consensus 70 ----~g~~rt~~e~~~ll~~aGf~~~~~~~ 95 (107)
....++.++|.++|+++||+++++..
T Consensus 177 ~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 177 ETEFIAHHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp CEEEEEECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred CcceeeEeCCHHHHHHHHHHcCCEEEEEEe
Confidence 01357999999999999999988753
No 42
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.05 E-value=4.4e-10 Score=75.65 Aligned_cols=82 Identities=13% Similarity=0.067 Sum_probs=60.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
++|++++..+||+++|++...+|++++++|+|||++++.+...+. +.... ...+....... ....||.+|+.+
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~---~~~~~---~~~~~~~~~~~-~~~~~s~~ei~~ 229 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG---LPAQQ---KLARITRENLG-EGWARTPEEIER 229 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS---CHHHH---HHHHHHHHHHS-CCCCBCHHHHHH
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc---hHHHH---HHHHHHHhcCC-CCccCCHHHHHH
Confidence 479999999999999988899999999999999999999976532 11111 11221111112 456799999999
Q ss_pred HHHHcCCCceE
Q 042267 82 LAIEAGFKGIN 92 (107)
Q Consensus 82 ll~~aGf~~~~ 92 (107)
+| +||++++
T Consensus 230 ~l--~G~~l~~ 238 (274)
T 2qe6_A 230 QF--GDFELVE 238 (274)
T ss_dssp TT--TTCEECT
T ss_pred Hh--CCCeEcc
Confidence 99 6998765
No 43
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.04 E-value=1.5e-09 Score=73.33 Aligned_cols=96 Identities=20% Similarity=0.264 Sum_probs=67.8
Q ss_pred ceeEEEecccccCCCh-------HHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhh-----hhhhhcHHHHhhCC
Q 042267 2 QVYLSILQWMLHNFDD-------ENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASR-----DSFILDAIFLIQIP 69 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 69 (107)
.||+|++..++|+++| +....+++++++.|+|||++++.+...++......... ...+.+.......+
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 216 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFP 216 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCT
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCC
Confidence 6899999999999955 56789999999999999999999887653311000000 00000111111245
Q ss_pred CceecCHHHHHHHHHHcCCCceEEEEcC
Q 042267 70 HGRERTKKEFTALAIEAGFKGINFECNV 97 (107)
Q Consensus 70 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 97 (107)
++...+.+++.++++++||+++++...+
T Consensus 217 ~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 217 GGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp TCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 7788999999999999999999887653
No 44
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.01 E-value=8.8e-10 Score=71.88 Aligned_cols=85 Identities=16% Similarity=0.091 Sum_probs=61.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++. ..+|+++++.|+|||++++.+......... ........ ........+.+++.+
T Consensus 116 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~ 185 (242)
T 3l8d_A 116 QFEAIMAINSLEWTEEP--LRALNEIKRVLKSDGYACIAILGPTAKPRE---NSYPRLYG-----KDVVCNTMMPWEFEQ 185 (242)
T ss_dssp CEEEEEEESCTTSSSCH--HHHHHHHHHHEEEEEEEEEEEECTTCGGGG---GGGGGGGT-----CCCSSCCCCHHHHHH
T ss_pred CccEEEEcChHhhccCH--HHHHHHHHHHhCCCeEEEEEEcCCcchhhh---hhhhhhcc-----ccccccCCCHHHHHH
Confidence 58999999999999874 689999999999999999988543322111 11111111 011344588999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+++++||++++...+
T Consensus 186 ~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 186 LVKEQGFKVVDGIGV 200 (242)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCEEEEeecc
Confidence 999999999987654
No 45
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.00 E-value=1e-09 Score=70.60 Aligned_cols=76 Identities=16% Similarity=0.236 Sum_probs=60.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++| +++ ...+|+++++.|+|||++++.+.... . .+.++|.+
T Consensus 115 ~fD~v~~~~~l~-~~~--~~~~l~~~~~~L~~gG~l~i~~~~~~----------------------~-----~~~~~~~~ 164 (215)
T 2zfu_A 115 SVDVAVFCLSLM-GTN--IRDFLEEANRVLKPGGLLKVAEVSSR----------------------F-----EDVRTFLR 164 (215)
T ss_dssp CEEEEEEESCCC-SSC--HHHHHHHHHHHEEEEEEEEEEECGGG----------------------C-----SCHHHHHH
T ss_pred CEeEEEEehhcc-ccC--HHHHHHHHHHhCCCCeEEEEEEcCCC----------------------C-----CCHHHHHH
Confidence 589999999998 444 57999999999999999999874310 0 16899999
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+++++||++++.....+.+.++.++|
T Consensus 165 ~l~~~Gf~~~~~~~~~~~~~~~~~~k 190 (215)
T 2zfu_A 165 AVTKLGFKIVSKDLTNSHFFLFDFQK 190 (215)
T ss_dssp HHHHTTEEEEEEECCSTTCEEEEEEE
T ss_pred HHHHCCCEEEEEecCCCeEEEEEEEe
Confidence 99999999988766666667777654
No 46
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.00 E-value=5.2e-10 Score=73.61 Aligned_cols=85 Identities=8% Similarity=-0.015 Sum_probs=63.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++..++|++++ ..++|+++++.|+|||++++.++.....+.... ....+. . ......++.++|.+
T Consensus 103 ~fD~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~---~~~~~~----~-~~~~~~~~~~~~~~ 172 (256)
T 1nkv_A 103 KCDVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEE---IAQACG----V-SSTSDFLTLPGLVG 172 (256)
T ss_dssp CEEEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHH---HHHTTT----C-SCGGGSCCHHHHHH
T ss_pred CCCEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCChHH---HHHHHh----c-ccccccCCHHHHHH
Confidence 5899999999999987 479999999999999999999987654432211 110110 0 11234578999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+|+++||+.+++...
T Consensus 173 ~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 173 AFDDLGYDVVEMVLA 187 (256)
T ss_dssp HHHTTTBCCCEEEEC
T ss_pred HHHHCCCeeEEEEeC
Confidence 999999999877543
No 47
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.98 E-value=8.7e-10 Score=73.40 Aligned_cols=90 Identities=18% Similarity=0.275 Sum_probs=62.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCC---CCCchhhhh-hhhhcHHHHhhCCCceecCHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEV---PDSTEASRD-SFILDAIFLIQIPHGRERTKK 77 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~g~~rt~~ 77 (107)
.||+|++.+++|++++. ..+|+++++.|+|||.+++.+...... +..+..... ..... .... .++..++..
T Consensus 105 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~ 179 (276)
T 3mgg_A 105 SFDHIFVCFVLEHLQSP--EEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR--VQAY-MKGNSLVGR 179 (276)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHH--HHHH-TTCCTTGGG
T ss_pred CeeEEEEechhhhcCCH--HHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHH--HHHh-cCCCcchHH
Confidence 58999999999999985 599999999999999999998643211 111111111 01111 1111 256667788
Q ss_pred HHHHHHHHcCCCceEEEEc
Q 042267 78 EFTALAIEAGFKGINFECN 96 (107)
Q Consensus 78 e~~~ll~~aGf~~~~~~~~ 96 (107)
++.++|+++||+++++.+.
T Consensus 180 ~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 180 QIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp GHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHCCCCeEEEeeE
Confidence 9999999999999887644
No 48
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.98 E-value=2.4e-09 Score=74.93 Aligned_cols=85 Identities=18% Similarity=0.217 Sum_probs=62.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++..++|+++| ..++|+++++.|+|||++++.+...+... .... ........ ...+...+.++|.+
T Consensus 166 ~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~-~~~~-----~~~~~~~~-~~~~~~~~~~~~~~ 236 (383)
T 4fsd_A 166 SVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRL-SEAA-----QQDPILYG-ECLGGALYLEDFRR 236 (383)
T ss_dssp CEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCC-CHHH-----HHCHHHHH-TTCTTCCBHHHHHH
T ss_pred CEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEecccccc-CHhH-----hhhHHHhh-cccccCCCHHHHHH
Confidence 5899999999999988 47999999999999999999987765322 1111 11111111 12445678899999
Q ss_pred HHHHcCCCceEEEE
Q 042267 82 LAIEAGFKGINFEC 95 (107)
Q Consensus 82 ll~~aGf~~~~~~~ 95 (107)
+|+++||+.+++..
T Consensus 237 ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 237 LVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHTTCCCEEEEE
T ss_pred HHHHCCCceEEEEe
Confidence 99999999887643
No 49
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.97 E-value=1.2e-09 Score=73.76 Aligned_cols=105 Identities=10% Similarity=0.050 Sum_probs=66.0
Q ss_pred ceeEEEe-cccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCch--hhhhh----h-------------hhc
Q 042267 2 QVYLSIL-QWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTE--ASRDS----F-------------ILD 61 (107)
Q Consensus 2 ~~D~v~~-~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~--~~~~~----~-------------~~~ 61 (107)
.||+|++ ..++|.+++++..++|+++++.|+|||++++..+..+....... ...+. . ...
T Consensus 150 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (299)
T 3g2m_A 150 RFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQE 229 (299)
T ss_dssp CEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEE
T ss_pred CcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEE
Confidence 5898885 57788888888999999999999999999997765431100000 00000 0 000
Q ss_pred HHHHh----------hCCCceecCHHHHHHHHHHcCCCceEEEEcC------CceeEEEEE
Q 042267 62 AIFLI----------QIPHGRERTKKEFTALAIEAGFKGINFECNV------CNSYVMEFY 106 (107)
Q Consensus 62 ~~~~~----------~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~------~~~~vi~~~ 106 (107)
+.... .....+.+|.++|+++|+++||+++++.+.. ....++|+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~ 290 (299)
T 3g2m_A 230 ITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAV 290 (299)
T ss_dssp EEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEE
T ss_pred EEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehh
Confidence 00000 0001124799999999999999999998764 224566654
No 50
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.96 E-value=1.1e-09 Score=70.49 Aligned_cols=91 Identities=15% Similarity=0.005 Sum_probs=59.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhh--hhhcHHHHhhCCCceecCHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDS--FILDAIFLIQIPHGRERTKKEF 79 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~rt~~e~ 79 (107)
.||+|++.+++| +++ ..++|+++++.|+|||++++.++............... .+..............+|.++|
T Consensus 116 ~fD~v~~~~~l~-~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (227)
T 3e8s_A 116 DYDLICANFALL-HQD--IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASW 192 (227)
T ss_dssp CEEEEEEESCCC-SSC--CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHH
T ss_pred CccEEEECchhh-hhh--HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHH
Confidence 499999999999 655 46999999999999999999887643332211000000 0000000000001234799999
Q ss_pred HHHHHHcCCCceEEEE
Q 042267 80 TALAIEAGFKGINFEC 95 (107)
Q Consensus 80 ~~ll~~aGf~~~~~~~ 95 (107)
.++|+++||+++++..
T Consensus 193 ~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 193 LNALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHHHTTEEEEEEEC
T ss_pred HHHHHHcCCeEEEEec
Confidence 9999999999998864
No 51
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.95 E-value=3.9e-09 Score=68.67 Aligned_cols=90 Identities=13% Similarity=0.126 Sum_probs=61.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHH-hhCCCCCEEEEEeeeCCCCCCCchhh---hh---hhhhcHHHHhhCCCceec
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCY-KALPNDGKVLVINSTLPEVPDSTEAS---RD---SFILDAIFLIQIPHGRER 74 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~-~aL~pgg~l~i~e~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~g~~r 74 (107)
.||+|++.+++|+++|. .++|++++ +.|+|||++++.++...... .... .. ...+.-.... ......+
T Consensus 103 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 177 (250)
T 2p7i_A 103 RYDNIVLTHVLEHIDDP--VALLKRINDDWLAEGGRLFLVCPNANAVS--RQIAVKMGIISHNSAVTEAEFA-HGHRCTY 177 (250)
T ss_dssp CEEEEEEESCGGGCSSH--HHHHHHHHHTTEEEEEEEEEEEECTTCHH--HHHHHHTTSSSSTTCCCHHHHH-TTCCCCC
T ss_pred cccEEEEhhHHHhhcCH--HHHHHHHHHHhcCCCCEEEEEcCChHHHH--HHHHHHcCccccchhccccccc-ccccccC
Confidence 58999999999999885 69999999 99999999999875432110 0000 00 0000000001 1244568
Q ss_pred CHHHHHHHHHHcCCCceEEEEc
Q 042267 75 TKKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 75 t~~e~~~ll~~aGf~~~~~~~~ 96 (107)
+.+++.++|+++||+++++...
T Consensus 178 ~~~~~~~~l~~~Gf~~~~~~~~ 199 (250)
T 2p7i_A 178 ALDTLERDASRAGLQVTYRSGI 199 (250)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEeee
Confidence 9999999999999999887643
No 52
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.95 E-value=2.3e-09 Score=72.26 Aligned_cols=84 Identities=17% Similarity=0.018 Sum_probs=57.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|+++|. .+.|+++++.|+|||++++.+... + .. .......+.-. +........++.++|.+
T Consensus 135 ~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~~~-~---~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 206 (292)
T 2aot_A 135 KWDFIHMIQMLYYVKDI--PATLKFFHSLLGTNAKMLIIVVSG-S---SG-WDKLWKKYGSR-FPQDDLCQYITSDDLTQ 206 (292)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEECT-T---SH-HHHHHHHHGGG-SCCCTTCCCCCHHHHHH
T ss_pred ceeEEEEeeeeeecCCH--HHHHHHHHHHcCCCcEEEEEEecC-C---cc-HHHHHHHHHHh-ccCCCcccCCCHHHHHH
Confidence 48999999999999984 689999999999999999986432 1 11 11110000000 00000124578999999
Q ss_pred HHHHcCCCceEE
Q 042267 82 LAIEAGFKGINF 93 (107)
Q Consensus 82 ll~~aGf~~~~~ 93 (107)
+|+++||+..+.
T Consensus 207 ~l~~aGf~~~~~ 218 (292)
T 2aot_A 207 MLDNLGLKYECY 218 (292)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHCCCceEEE
Confidence 999999998764
No 53
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.94 E-value=2.6e-09 Score=66.90 Aligned_cols=65 Identities=11% Similarity=0.129 Sum_probs=51.6
Q ss_pred ceeEEEecccccCC-ChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHH
Q 042267 2 QVYLSILQWMLHNF-DDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFT 80 (107)
Q Consensus 2 ~~D~v~~~~vlh~~-~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~ 80 (107)
.||+|+..+++|++ ++. .++|+++++.|+|||++++.++...... . ....++.++|.
T Consensus 63 ~fD~V~~~~~l~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~-~-------------------~~~~~~~~~~~ 120 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHS--AEILAEIARILRPGGCLFLKEPVETAVD-N-------------------NSKVKTASKLC 120 (176)
T ss_dssp CEEEEEECCSTTCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESSSC-S-------------------SSSSCCHHHHH
T ss_pred CEeEEEECChhhhcccCH--HHHHHHHHHHCCCCEEEEEEcccccccc-c-------------------ccccCCHHHHH
Confidence 58999999999999 663 7899999999999999999765532210 0 11136789999
Q ss_pred HHHHHcCC
Q 042267 81 ALAIEAGF 88 (107)
Q Consensus 81 ~ll~~aGf 88 (107)
++|+++||
T Consensus 121 ~~l~~aGf 128 (176)
T 2ld4_A 121 SALTLSGL 128 (176)
T ss_dssp HHHHHTTC
T ss_pred HHHHHCCC
Confidence 99999999
No 54
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.92 E-value=3.8e-09 Score=71.78 Aligned_cols=85 Identities=11% Similarity=0.021 Sum_probs=63.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+...++|+++ ..++|+++++.|+|||++++.+........... .....++... ....++.++|.+
T Consensus 185 ~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~s~~~~~~ 254 (312)
T 3vc1_A 185 AVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPS--KWVSQINAHF-----ECNIHSRREYLR 254 (312)
T ss_dssp CEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCC--HHHHHHHHHH-----TCCCCBHHHHHH
T ss_pred CEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchh--HHHHHHHhhh-----cCCCCCHHHHHH
Confidence 589999999999994 689999999999999999999987655332110 1111111111 113678999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+++++||+++++...
T Consensus 255 ~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 255 AMADNRLVPHTIVDL 269 (312)
T ss_dssp HHHTTTEEEEEEEEC
T ss_pred HHHHCCCEEEEEEeC
Confidence 999999999988764
No 55
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.89 E-value=4.6e-09 Score=66.44 Aligned_cols=75 Identities=9% Similarity=0.080 Sum_probs=58.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+...++|++++++..++++++++.|+|||++++++...++....+ ......++.+++.+
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~ 160 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT----------------VGFPFAFKEGELRR 160 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC----------------SCCSCCBCTTHHHH
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC----------------CCCCCccCHHHHHH
Confidence 58999999999999987889999999999999999999887754432111 01223467889999
Q ss_pred HHHHcCCCceEEE
Q 042267 82 LAIEAGFKGINFE 94 (107)
Q Consensus 82 ll~~aGf~~~~~~ 94 (107)
+|++ |++++..
T Consensus 161 ~~~~--f~~~~~~ 171 (199)
T 2xvm_A 161 YYEG--WERVKYN 171 (199)
T ss_dssp HTTT--SEEEEEE
T ss_pred HhcC--CeEEEec
Confidence 9975 9988764
No 56
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.89 E-value=5e-09 Score=68.91 Aligned_cols=84 Identities=11% Similarity=-0.056 Sum_probs=61.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++..++|+++ ..++|+++++.|+|||++++.+........... ....+.- . .....+.++|.+
T Consensus 114 ~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~---~~~~~~~---~---~~~~~~~~~~~~ 181 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAE---IEDFWMD---A---YPEISVIPTCID 181 (257)
T ss_dssp CEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHH---HHHHHHH---H---CTTCCBHHHHHH
T ss_pred CEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHH---HHHHHHH---h---CCCCCCHHHHHH
Confidence 589999999999994 468999999999999999999976443322211 1111111 1 122578999999
Q ss_pred HHHHcCCCceEEEEcC
Q 042267 82 LAIEAGFKGINFECNV 97 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~ 97 (107)
+++++||+.++....+
T Consensus 182 ~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 182 KMERAGYTPTAHFILP 197 (257)
T ss_dssp HHHHTTEEEEEEEECC
T ss_pred HHHHCCCeEEEEEECC
Confidence 9999999999887654
No 57
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.87 E-value=2.4e-08 Score=64.94 Aligned_cols=93 Identities=17% Similarity=0.120 Sum_probs=59.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCC---CCCC-------Cc---hhhhhhh--hhcHHHHh
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP---EVPD-------ST---EASRDSF--ILDAIFLI 66 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~---~~~~-------~~---~~~~~~~--~~~~~~~~ 66 (107)
.||+|++.+++|++++ ..++|+++++.|+|||++++...... .... .. ....+.. ........
T Consensus 107 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (243)
T 3bkw_A 107 SFDLAYSSLALHYVED--VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLA 184 (243)
T ss_dssp CEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHH
T ss_pred CceEEEEeccccccch--HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeecc
Confidence 5899999999999986 57999999999999999999764311 0000 00 0000000 00000000
Q ss_pred hCCCceecCHHHHHHHHHHcCCCceEEEEc
Q 042267 67 QIPHGRERTKKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 67 ~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 96 (107)
.......+|.++|.++|+++||+++++...
T Consensus 185 ~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 185 KGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred CceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 011233479999999999999999988653
No 58
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.87 E-value=5.2e-09 Score=69.66 Aligned_cols=81 Identities=11% Similarity=0.017 Sum_probs=58.2
Q ss_pred ceeEEEecccccCC-C-hHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHH
Q 042267 2 QVYLSILQWMLHNF-D-DENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEF 79 (107)
Q Consensus 2 ~~D~v~~~~vlh~~-~-d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~ 79 (107)
.||+|+++.+||+. + .++..++|+++++.|+|||++++.+...... +..+-.. . .....+.+++
T Consensus 156 ~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~----------~~~g~~~---~-~~~~~~~~~l 221 (263)
T 2a14_A 156 LADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS----------YMVGKRE---F-SCVALEKGEV 221 (263)
T ss_dssp CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE----------EEETTEE---E-ECCCCCHHHH
T ss_pred CCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc----------ceeCCeE---e-eccccCHHHH
Confidence 58999999999975 2 3567899999999999999999987542210 0000000 0 1123589999
Q ss_pred HHHHHHcCCCceEEEEc
Q 042267 80 TALAIEAGFKGINFECN 96 (107)
Q Consensus 80 ~~ll~~aGf~~~~~~~~ 96 (107)
.++|+++||+++++...
T Consensus 222 ~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 222 EQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHCCCEEEEEeec
Confidence 99999999999887653
No 59
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.86 E-value=7e-09 Score=67.03 Aligned_cols=87 Identities=16% Similarity=0.157 Sum_probs=60.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++. .++|+++++.|+|||.+++.+.... . ............ .........++.++|.+
T Consensus 102 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~-~----~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 173 (219)
T 1vlm_A 102 SFDFALMVTTICFVDDP--ERALKEAYRILKKGGYLIVGIVDRE-S----FLGREYEKNKEK-SVFYKNARFFSTEELMD 173 (219)
T ss_dssp CEEEEEEESCGGGSSCH--HHHHHHHHHHEEEEEEEEEEEECSS-S----HHHHHHHHTTTC--CCSTTCCCCCHHHHHH
T ss_pred CeeEEEEcchHhhccCH--HHHHHHHHHHcCCCcEEEEEEeCCc-c----HHHHHHHHHhcC-cchhcccccCCHHHHHH
Confidence 58999999999999874 6899999999999999999875432 1 111110000000 00011345589999999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+|+++||+++++...
T Consensus 174 ~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 174 LMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHTTCEEEEEEEE
T ss_pred HHHHCCCeEEEEecc
Confidence 999999999887644
No 60
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.85 E-value=7.4e-09 Score=68.72 Aligned_cols=84 Identities=14% Similarity=-0.053 Sum_probs=62.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++..++|+++ ..++|+++++.|+|||++++.+........... ....+. -. .....+.+++.+
T Consensus 114 ~fD~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~---~~~~~~---~~---~~~~~~~~~~~~ 181 (267)
T 3kkz_A 114 ELDLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAE---INDFWM---DA---YPEIDTIPNQVA 181 (267)
T ss_dssp CEEEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHH---HHHHHH---HH---CTTCEEHHHHHH
T ss_pred CEEEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHH---HHHHHH---Hh---CCCCCCHHHHHH
Confidence 589999999999993 378999999999999999999987543322211 111111 10 224578999999
Q ss_pred HHHHcCCCceEEEEcC
Q 042267 82 LAIEAGFKGINFECNV 97 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~ 97 (107)
+++++||+.+++..++
T Consensus 182 ~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 182 KIHKAGYLPVATFILP 197 (267)
T ss_dssp HHHHTTEEEEEEEECC
T ss_pred HHHHCCCEEEEEEECC
Confidence 9999999999887764
No 61
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.84 E-value=1.9e-08 Score=66.76 Aligned_cols=92 Identities=9% Similarity=-0.024 Sum_probs=61.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhh-hhcHHHHhhC---CC--ceecC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSF-ILDAIFLIQI---PH--GRERT 75 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~--g~~rt 75 (107)
.||+|++..++|++++.+ .+++.+++.++|||++++.+...+...... ...... .......... .. ....|
T Consensus 122 ~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 198 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYAIAPSDVANIRTLIT 198 (275)
T ss_dssp CCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHHHSCCTTCSCCCCCC
T ss_pred CEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhhccccccccccccCC
Confidence 589999999999999864 478888888888999999998765442111 101000 0000000000 01 13589
Q ss_pred HHHHHHHHHHcCCCceEEEEc
Q 042267 76 KKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~~~~ 96 (107)
.+++.++++++||+++++...
T Consensus 199 ~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 199 PDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHHHCCCeeEEEEEe
Confidence 999999999999999887655
No 62
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.83 E-value=4.1e-09 Score=70.56 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=61.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHh-------hCCCceec
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLI-------QIPHGRER 74 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~r 74 (107)
.||+|++.+++|++++. .++|+++++.|+|||++++.++......... .....+...... .......+
T Consensus 136 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (285)
T 4htf_A 136 PVDLILFHAVLEWVADP--RSVLQTLWSVLRPGGVLSLMFYNAHGLLMHN---MVAGNFDYVQAGMPKKKKRTLSPDYPR 210 (285)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEEBHHHHHHHH---HHTTCHHHHHTTCCCC----CCCSCCB
T ss_pred CceEEEECchhhcccCH--HHHHHHHHHHcCCCeEEEEEEeCCchHHHHH---HHhcCHHHHhhhccccccccCCCCCCC
Confidence 58999999999999885 6899999999999999999876432110000 000000000000 00123457
Q ss_pred CHHHHHHHHHHcCCCceEEEEcC
Q 042267 75 TKKEFTALAIEAGFKGINFECNV 97 (107)
Q Consensus 75 t~~e~~~ll~~aGf~~~~~~~~~ 97 (107)
+.+++.++|+++||+++++..+.
T Consensus 211 ~~~~l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 211 DPTQVYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEES
T ss_pred CHHHHHHHHHHCCCceeeeeeEE
Confidence 89999999999999999887653
No 63
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.83 E-value=8.4e-09 Score=72.58 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=62.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|+++| ...+|+++++.|+|||++++..+..... . .. ..++. . +..+...++.++|.+
T Consensus 171 ~fD~I~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~-----~-~~-~~~~~--~-~~~~~~~~s~~~l~~ 238 (416)
T 4e2x_A 171 PANVIYAANTLCHIPY--VQSVLEGVDALLAPDGVFVFEDPYLGDI-----V-AK-TSFDQ--I-FDEHFFLFSATSVQG 238 (416)
T ss_dssp CEEEEEEESCGGGCTT--HHHHHHHHHHHEEEEEEEEEEEECHHHH-----H-HH-TCGGG--C-STTCCEECCHHHHHH
T ss_pred CEEEEEECChHHhcCC--HHHHHHHHHHHcCCCeEEEEEeCChHHh-----h-hh-cchhh--h-hhhhhhcCCHHHHHH
Confidence 5999999999999987 5899999999999999999865442110 0 00 01110 0 012456689999999
Q ss_pred HHHHcCCCceEEEEcC
Q 042267 82 LAIEAGFKGINFECNV 97 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~ 97 (107)
+++++||+++++...+
T Consensus 239 ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 239 MAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHTTEEEEEEEEEC
T ss_pred HHHHcCCEEEEEEEcc
Confidence 9999999999887654
No 64
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.81 E-value=2.1e-09 Score=69.26 Aligned_cols=90 Identities=14% Similarity=0.096 Sum_probs=60.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhh-hhhhcHHH--HhhCCCceecCHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRD-SFILDAIF--LIQIPHGRERTKKE 78 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~g~~rt~~e 78 (107)
.||+|++.+++|++++. ..+|+++++.|+|||.+++..+..... ...... ...+.... .........++.++
T Consensus 93 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHI---SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNE 167 (230)
T ss_dssp CEEEEEEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSH---HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHH
T ss_pred ccCEEEECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchH---HHHHHHhcCCceeccCCCCCcceEEEecHHH
Confidence 58999999999999885 699999999999999999977543211 000000 00000000 00001224579999
Q ss_pred HHHHHHHcCCCceEEEEc
Q 042267 79 FTALAIEAGFKGINFECN 96 (107)
Q Consensus 79 ~~~ll~~aGf~~~~~~~~ 96 (107)
|.++++++||+++++...
T Consensus 168 ~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 168 MLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHcCCeEEEEEec
Confidence 999999999999888764
No 65
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.80 E-value=1.5e-08 Score=65.91 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=33.4
Q ss_pred ceeEEEecc-cccCC-ChHHHHHHHHHHHhhCCCCCEEEE
Q 042267 2 QVYLSILQW-MLHNF-DDENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~-vlh~~-~d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
.||+|++.. ++|++ +.++..++|+++++.|+|||++++
T Consensus 96 ~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 96 PVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 589999986 89888 556788999999999999999987
No 66
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.80 E-value=2.1e-09 Score=69.95 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=34.6
Q ss_pred ceeEEEecc-cccCCC-hHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQW-MLHNFD-DENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~-vlh~~~-d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|++.. ++|+++ +++..++|+++++.|+|||++++.
T Consensus 101 ~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 101 KFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 589999998 999995 366899999999999999999873
No 67
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.78 E-value=5.8e-09 Score=68.57 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=58.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCC-----------CCCCCchhhhhhhhhc-----HHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP-----------EVPDSTEASRDSFILD-----AIFL 65 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~-----------~~~~~~~~~~~~~~~~-----~~~~ 65 (107)
.||+|++.+++|++++ ..++|+++++.|+|||++++...... ..............++ ....
T Consensus 108 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (253)
T 3g5l_A 108 AYNVVLSSLALHYIAS--FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFL 185 (253)
T ss_dssp CEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEET
T ss_pred CeEEEEEchhhhhhhh--HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeec
Confidence 6899999999999977 57999999999999999998743210 0000000000000000 0000
Q ss_pred hhCCCceecCHHHHHHHHHHcCCCceEEEEc
Q 042267 66 IQIPHGRERTKKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 66 ~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 96 (107)
........+|.++|.++|+++||+++++...
T Consensus 186 ~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 186 GEDVQKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp TEEEEEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred cccCccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 0000112249999999999999999988743
No 68
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.77 E-value=3.6e-08 Score=61.83 Aligned_cols=67 Identities=18% Similarity=0.119 Sum_probs=56.1
Q ss_pred ceeEEEec-ccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHH
Q 042267 2 QVYLSILQ-WMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFT 80 (107)
Q Consensus 2 ~~D~v~~~-~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~ 80 (107)
.||+|++. .++|+.++++...+|+++++.|+|||++++..... ..++.+++.
T Consensus 107 ~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~---------------------------~~~~~~~~~ 159 (195)
T 3cgg_A 107 DFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG---------------------------RGWVFGDFL 159 (195)
T ss_dssp CEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT---------------------------SSCCHHHHH
T ss_pred ceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC---------------------------CCcCHHHHH
Confidence 58999998 89999988888999999999999999998864211 014678999
Q ss_pred HHHHHcCCCceEEEE
Q 042267 81 ALAIEAGFKGINFEC 95 (107)
Q Consensus 81 ~ll~~aGf~~~~~~~ 95 (107)
++++++||++.+...
T Consensus 160 ~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 160 EVAERVGLELENAFE 174 (195)
T ss_dssp HHHHHHTEEEEEEES
T ss_pred HHHHHcCCEEeeeec
Confidence 999999999988754
No 69
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.77 E-value=1e-08 Score=67.49 Aligned_cols=81 Identities=15% Similarity=0.048 Sum_probs=57.7
Q ss_pred ceeEEEecccccCCCh--HHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHH
Q 042267 2 QVYLSILQWMLHNFDD--ENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEF 79 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d--~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~ 79 (107)
.||+|++..++|+.++ ++...+|+++++.|+|||++++.+..... .. ..-+.. . .....+.+++
T Consensus 157 ~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-----~~----~~~~~~----~-~~~~~~~~~~ 222 (265)
T 2i62_A 157 PADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-----YY----MIGEQK----F-SSLPLGWETV 222 (265)
T ss_dssp CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-----EE----EETTEE----E-ECCCCCHHHH
T ss_pred CccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-----eE----EcCCcc----c-cccccCHHHH
Confidence 5899999999994433 25789999999999999999998844221 00 000000 0 1123578899
Q ss_pred HHHHHHcCCCceEEEEc
Q 042267 80 TALAIEAGFKGINFECN 96 (107)
Q Consensus 80 ~~ll~~aGf~~~~~~~~ 96 (107)
.++|+++||+++++...
T Consensus 223 ~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 223 RDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp HHHHHHTTCEEEEEEEE
T ss_pred HHHHHHCCCEEEEEEEe
Confidence 99999999999887654
No 70
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.76 E-value=1e-08 Score=68.82 Aligned_cols=89 Identities=11% Similarity=0.136 Sum_probs=59.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC-----C---CCCCCch---hhhhhhhhcHHHHhhCCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL-----P---EVPDSTE---ASRDSFILDAIFLIQIPH 70 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~-----~---~~~~~~~---~~~~~~~~~~~~~~~~~~ 70 (107)
.||+|++.+++|+++|. .++++++++.|+|||.+++.++.. . ++...+. .......+.-. .. ..+
T Consensus 89 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 164 (284)
T 3gu3_A 89 KYDIAICHAFLLHMTTP--ETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESD-TQ-RNG 164 (284)
T ss_dssp CEEEEEEESCGGGCSSH--HHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHH-HH-HTC
T ss_pred CeeEEEECChhhcCCCH--HHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHH-hh-hhc
Confidence 58999999999999885 699999999999999999998651 1 1111000 00111111111 11 113
Q ss_pred ceecCHHHHHHHHHHcCCCceEEE
Q 042267 71 GRERTKKEFTALAIEAGFKGINFE 94 (107)
Q Consensus 71 g~~rt~~e~~~ll~~aGf~~~~~~ 94 (107)
....+..++.++|+++||+.+++.
T Consensus 165 ~~~~~~~~l~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 165 KDGNIGMKIPIYLSELGVKNIECR 188 (284)
T ss_dssp CCTTGGGTHHHHHHHTTCEEEEEE
T ss_pred ccccHHHHHHHHHHHcCCCeEEEE
Confidence 445667799999999999988764
No 71
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.75 E-value=5.8e-09 Score=70.06 Aligned_cols=80 Identities=13% Similarity=0.120 Sum_probs=57.7
Q ss_pred eeEEEecccccCCChH--HHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHH
Q 042267 3 VYLSILQWMLHNFDDE--NCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFT 80 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~--~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~ 80 (107)
||+|++..++|+.+++ +..++|+++++.|+|||++++.+....... ..-+. ......++.++|.
T Consensus 175 fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~l~ 240 (289)
T 2g72_A 175 ADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWY---------LAGEA-----RLTVVPVSEEEVR 240 (289)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEE---------EETTE-----EEECCCCCHHHHH
T ss_pred CCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceE---------EcCCe-----eeeeccCCHHHHH
Confidence 9999999999985533 578999999999999999999864421100 00000 0011236899999
Q ss_pred HHHHHcCCCceEEEEc
Q 042267 81 ALAIEAGFKGINFECN 96 (107)
Q Consensus 81 ~ll~~aGf~~~~~~~~ 96 (107)
++|+++||+++++...
T Consensus 241 ~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 241 EALVRSGYKVRDLRTY 256 (289)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHcCCeEEEeeEe
Confidence 9999999999877543
No 72
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.75 E-value=2.6e-08 Score=63.93 Aligned_cols=76 Identities=4% Similarity=-0.090 Sum_probs=56.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+...++|++++++..++++++++.|+|||+++++....+..... . .....+.+|+.+
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~-----------------~-~~~~~~~~el~~ 162 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLE-----------------G-PPFSVPQTWLHR 162 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSS-----------------S-CCCCCCHHHHHH
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccC-----------------C-CCCCCCHHHHHH
Confidence 5899999999999998888899999999999999955554332211000 0 011257899999
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
++++ ||++..+...
T Consensus 163 ~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 163 VMSG-NWEVTKVGGQ 176 (203)
T ss_dssp TSCS-SEEEEEEEES
T ss_pred HhcC-CcEEEEeccc
Confidence 9988 9998777654
No 73
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.72 E-value=5.3e-09 Score=66.77 Aligned_cols=90 Identities=4% Similarity=-0.129 Sum_probs=61.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCc--hhhhhhhhhcHHHHhhCCCceecCHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDST--EASRDSFILDAIFLIQIPHGRERTKKEF 79 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~rt~~e~ 79 (107)
.||+|++.+++|+++.++..++++++++.|+|||++++.+...++.+... ..... .+..........+...+.+++
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~e~ 166 (209)
T 2p8j_A 89 SMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEG--EFLQLERGEKVIHSYVSLEEA 166 (209)
T ss_dssp CEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETT--EEEECC-CCCEEEEEECHHHH
T ss_pred ceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccc--cceeccCCCceeEEecCHHHH
Confidence 58999999999999888889999999999999999999988765432111 00000 000000000001245799999
Q ss_pred HHHHHHcCCCceEE
Q 042267 80 TALAIEAGFKGINF 93 (107)
Q Consensus 80 ~~ll~~aGf~~~~~ 93 (107)
.++|+++||...+.
T Consensus 167 ~~~~~~~g~~~~~~ 180 (209)
T 2p8j_A 167 DKYFKDMKVLFKED 180 (209)
T ss_dssp HHTTTTSEEEEEEE
T ss_pred HHHHhhcCceeeee
Confidence 99999999876654
No 74
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=9.3e-09 Score=67.30 Aligned_cols=91 Identities=8% Similarity=-0.060 Sum_probs=59.8
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhh--hhhhcHH-HHhhCCCceecCHHHH
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRD--SFILDAI-FLIQIPHGRERTKKEF 79 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~g~~rt~~e~ 79 (107)
+|+|++..++|++++++..++|+++++.|+|||++++.+...++.......... .....+. ...........+.+++
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDI 204 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHH
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHH
Confidence 799999999999998888999999999999999999999764421100000000 0000000 0100001123689999
Q ss_pred HHHHHHcCCCceEEEE
Q 042267 80 TALAIEAGFKGINFEC 95 (107)
Q Consensus 80 ~~ll~~aGf~~~~~~~ 95 (107)
.++| +||++++...
T Consensus 205 ~~~~--aGf~~~~~~~ 218 (245)
T 3ggd_A 205 ELYF--PDFEILSQGE 218 (245)
T ss_dssp HHHC--TTEEEEEEEC
T ss_pred HHHh--CCCEEEeccc
Confidence 9999 9999987643
No 75
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.70 E-value=4.2e-08 Score=65.00 Aligned_cols=85 Identities=11% Similarity=0.010 Sum_probs=58.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|+++| ..++|+++++.|+ ||++++.+...+.... .... ..+... .. ..+....+.+++.
T Consensus 94 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~-~~~~---~~~~~~-~~-~~~~~~~~~~~~~- 163 (261)
T 3ege_A 94 SVDGVISILAIHHFSH--LEKSFQEMQRIIR-DGTIVLLTFDIRLAQR-IWLY---DYFPFL-WE-DALRFLPLDEQIN- 163 (261)
T ss_dssp CBSEEEEESCGGGCSS--HHHHHHHHHHHBC-SSCEEEEEECGGGCCC-CGGG---GTCHHH-HH-HHHTSCCHHHHHH-
T ss_pred CEeEEEEcchHhhccC--HHHHHHHHHHHhC-CcEEEEEEcCCchhHH-HHHH---HHHHHH-hh-hhhhhCCCHHHHH-
Confidence 5899999999999977 5799999999999 9999999875432221 1100 011100 10 0023345678888
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
+|+++||+.+++...
T Consensus 164 ~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 164 LLQENTKRRVEAIPF 178 (261)
T ss_dssp HHHHHHCSEEEEEEC
T ss_pred HHHHcCCCceeEEEe
Confidence 999999999887654
No 76
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.70 E-value=8.1e-08 Score=61.81 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=54.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHH-
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFT- 80 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~- 80 (107)
.||+|++..++|++++++..++|+++++.|+|||.+++.... +.+..-... .... ..........+.+++.
T Consensus 102 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~-~~~~~~~~~------~~~~-~~~~~~~~~~~~~~l~~ 173 (219)
T 3jwg_A 102 GYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK-EYNFHYGNL------FEGN-LRHRDHRFEWTRKEFQT 173 (219)
T ss_dssp TCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG-GGGGCCCCT------------GGGCCTTSBCHHHHHH
T ss_pred CCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch-hhhhhhccc------Cccc-ccccCceeeecHHHHHH
Confidence 589999999999999988899999999999999966554432 211100000 0000 0001123346888888
Q ss_pred ---HHHHHcCCCceE
Q 042267 81 ---ALAIEAGFKGIN 92 (107)
Q Consensus 81 ---~ll~~aGf~~~~ 92 (107)
++++++||++.-
T Consensus 174 ~~~~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 174 WAVKVAEKYGYSVRF 188 (219)
T ss_dssp HHHHHHHHHTEEEEE
T ss_pred HHHHHHHHCCcEEEE
Confidence 778889997643
No 77
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.70 E-value=1.9e-08 Score=67.20 Aligned_cols=88 Identities=13% Similarity=0.030 Sum_probs=59.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHH-Hh-----hCCCceecC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIF-LI-----QIPHGRERT 75 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~g~~rt 75 (107)
.||+|++.+++|+++|. ..+|+++++.|+|||++++..+..+. ...... ....... .. ........+
T Consensus 117 ~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 189 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEP--EAAIASIHQALKSGGRFVAEFGGKGN---IKYILE--ALYNALETLGIHNPQALNPWYFPS 189 (279)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECTTT---THHHHH--HHHHHHHHHTCCCGGGGCCCCCCC
T ss_pred CcCEEEEcchhhhCcCH--HHHHHHHHHhcCCCcEEEEEecCCcc---hHHHHH--HHHHHHHhcCCccccCcCceeCCC
Confidence 58999999999999874 68999999999999999987654221 111100 0000000 00 000123568
Q ss_pred HHHHHHHHHHcCCCceEEEEc
Q 042267 76 KKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~~~~ 96 (107)
.++|.++|+++||+.+++...
T Consensus 190 ~~~~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 190 IGEYVNILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEEe
Confidence 999999999999999876543
No 78
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.67 E-value=3e-08 Score=65.21 Aligned_cols=87 Identities=21% Similarity=0.098 Sum_probs=56.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhh-CC---CceecCHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQ-IP---HGRERTKK 77 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~g~~rt~~ 77 (107)
.||+|++.+++|+++| ...+++++++.|+|||++++. ...+ +..+. ......+.-.+... .+ .....+.+
T Consensus 104 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~-~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (263)
T 2yqz_A 104 SVHGVIVVHLWHLVPD--WPKVLAEAIRVLKPGGALLEG-WDQA--EASPE-WTLQERWRAFAAEEGFPVERGLHAKRLK 177 (263)
T ss_dssp CEEEEEEESCGGGCTT--HHHHHHHHHHHEEEEEEEEEE-EEEE--CCCHH-HHHHHHHHHHHHHHTCCCCCCHHHHHHH
T ss_pred CeeEEEECCchhhcCC--HHHHHHHHHHHCCCCcEEEEE-ecCC--CccHH-HHHHHHHHHHHHHhCCCcccccccCCHH
Confidence 5899999999999987 478999999999999999987 2211 11110 00000111000000 10 12356789
Q ss_pred HHHHHHHHcCCCceEEE
Q 042267 78 EFTALAIEAGFKGINFE 94 (107)
Q Consensus 78 e~~~ll~~aGf~~~~~~ 94 (107)
++.++|+++||+.+.+.
T Consensus 178 ~~~~~l~~~Gf~~~~~~ 194 (263)
T 2yqz_A 178 EVEEALRRLGLKPRTRE 194 (263)
T ss_dssp HHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHcCCCcceEE
Confidence 99999999999987653
No 79
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.65 E-value=8e-08 Score=61.81 Aligned_cols=83 Identities=8% Similarity=-0.032 Sum_probs=54.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHH-
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFT- 80 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~- 80 (107)
.||+|++.+++|++++++..++|+++++.|+|||.+++..... .+. .+....... ..........+.+++.
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~-~~~------~~~~~~~~~-~~~~~~~~~~~~~~l~~ 173 (217)
T 3jwh_A 102 GYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIE-YNV------KFANLPAGK-LRHKDHRFEWTRSQFQN 173 (217)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHH-HHH------HTC------------CCSCBCHHHHHH
T ss_pred CcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcc-cch------hhccccccc-ccccccccccCHHHHHH
Confidence 5899999999999999888999999999999999776654321 000 000000000 0001123346888988
Q ss_pred ---HHHHHcCCCceE
Q 042267 81 ---ALAIEAGFKGIN 92 (107)
Q Consensus 81 ---~ll~~aGf~~~~ 92 (107)
++++++||++.-
T Consensus 174 ~~~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 174 WANKITERFAYNVQF 188 (217)
T ss_dssp HHHHHHHHSSEEEEE
T ss_pred HHHHHHHHcCceEEE
Confidence 888899998743
No 80
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.64 E-value=3.3e-08 Score=66.09 Aligned_cols=95 Identities=9% Similarity=-0.036 Sum_probs=61.0
Q ss_pred ceeEEEecccccC--CChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCC--------CCC-------------chhhhhhh
Q 042267 2 QVYLSILQWMLHN--FDDENCIKILRNCYKALPNDGKVLVINSTLPEV--------PDS-------------TEASRDSF 58 (107)
Q Consensus 2 ~~D~v~~~~vlh~--~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~--------~~~-------------~~~~~~~~ 58 (107)
.||+|++..++|+ .+.++..++|+++++.|+|||++++..+....- ... +.......
T Consensus 133 ~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 212 (298)
T 1ri5_A 133 EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREY 212 (298)
T ss_dssp CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEE
T ss_pred CcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceE
Confidence 5899999999998 667778999999999999999999987542100 000 00000000
Q ss_pred hhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEEEEc
Q 042267 59 ILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 59 ~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 96 (107)
.+.+............+.++++++++++||+++++...
T Consensus 213 ~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 213 RFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp EEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred EEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 00000000000124568999999999999999988754
No 81
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.57 E-value=5e-08 Score=64.09 Aligned_cols=87 Identities=9% Similarity=0.021 Sum_probs=55.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhh--hhcHHHHhh-CCCceecCHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSF--ILDAIFLIQ-IPHGRERTKKE 78 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~g~~rt~~e 78 (107)
.||+|++..++|+++| ..++|+++++.|+|||++++..+.....+.......... .+.-..... .......+.++
T Consensus 95 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (259)
T 2p35_A 95 KADLLYANAVFQWVPD--HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSD 172 (259)
T ss_dssp CEEEEEEESCGGGSTT--HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHH
T ss_pred CcCEEEEeCchhhCCC--HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHH
Confidence 5899999999999987 478999999999999999998753221110000000000 000000000 01234578999
Q ss_pred HHHHHHHcCCCc
Q 042267 79 FTALAIEAGFKG 90 (107)
Q Consensus 79 ~~~ll~~aGf~~ 90 (107)
|.++|+++||++
T Consensus 173 ~~~~l~~aGf~v 184 (259)
T 2p35_A 173 YFNALSPKSSRV 184 (259)
T ss_dssp HHHHHGGGEEEE
T ss_pred HHHHHHhcCCce
Confidence 999999999974
No 82
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.52 E-value=3.9e-07 Score=60.90 Aligned_cols=75 Identities=9% Similarity=0.145 Sum_probs=57.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++..++|++++++...+++++++.|+|||.++++.....+....+ .......+.+++.+
T Consensus 184 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----------------~~~~~~~~~~~l~~ 247 (286)
T 3m70_A 184 NYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP----------------LPFSFTFAENELKE 247 (286)
T ss_dssp CEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS----------------SCCSCCBCTTHHHH
T ss_pred CccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC----------------CCccccCCHHHHHH
Confidence 58999999999999998899999999999999999888776654332111 01123467788999
Q ss_pred HHHHcCCCceEEE
Q 042267 82 LAIEAGFKGINFE 94 (107)
Q Consensus 82 ll~~aGf~~~~~~ 94 (107)
+++ +|+++...
T Consensus 248 ~~~--~~~~~~~~ 258 (286)
T 3m70_A 248 YYK--DWEFLEYN 258 (286)
T ss_dssp HTT--TSEEEEEE
T ss_pred Hhc--CCEEEEEE
Confidence 995 58877663
No 83
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.52 E-value=1.9e-07 Score=63.09 Aligned_cols=80 Identities=19% Similarity=0.167 Sum_probs=56.2
Q ss_pred EEEecccccCCChHH-HHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHH
Q 042267 5 LSILQWMLHNFDDEN-CIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALA 83 (107)
Q Consensus 5 ~v~~~~vlh~~~d~~-~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll 83 (107)
++++..+||+.+|++ ...++++++++|+|||.|++.+...+..+. ... ......-.. ......||.+|+.++|
T Consensus 163 av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~--~~~---~~~~~~~~~-g~p~~~rs~~ei~~~f 236 (277)
T 3giw_A 163 ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQ--EVG---RVAREYAAR-NMPMRLRTHAEAEEFF 236 (277)
T ss_dssp EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHH--HHH---HHHHHHHHT-TCCCCCCCHHHHHHTT
T ss_pred hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHH--HHH---HHHHHHHhc-CCCCccCCHHHHHHHh
Confidence 688899999999976 689999999999999999999876542211 111 111111111 1134569999999999
Q ss_pred HHcCCCceE
Q 042267 84 IEAGFKGIN 92 (107)
Q Consensus 84 ~~aGf~~~~ 92 (107)
.||+.++
T Consensus 237 --~Glelve 243 (277)
T 3giw_A 237 --EGLELVE 243 (277)
T ss_dssp --TTSEECT
T ss_pred --CCCcccC
Confidence 4999664
No 84
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.46 E-value=2.1e-08 Score=67.75 Aligned_cols=87 Identities=11% Similarity=0.198 Sum_probs=55.3
Q ss_pred ceeEEEecccccCC----ChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHH
Q 042267 2 QVYLSILQWMLHNF----DDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKK 77 (107)
Q Consensus 2 ~~D~v~~~~vlh~~----~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~ 77 (107)
.||+|+..+++|++ ++++..++++++++.|+|||++++.......-........ .... .. .......+
T Consensus 177 ~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~--~~~~-~~-----~~~~~~p~ 248 (292)
T 3g07_A 177 EYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTE--TIYK-NY-----YRIQLKPE 248 (292)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCH--HHHH-HH-----HHCCCCGG
T ss_pred CcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccH--HHHh-hh-----hcEEEcHH
Confidence 58999999998554 7778999999999999999999874322110000000000 0010 00 11223468
Q ss_pred HHHHHHHH--cCCCceEEEEc
Q 042267 78 EFTALAIE--AGFKGINFECN 96 (107)
Q Consensus 78 e~~~ll~~--aGf~~~~~~~~ 96 (107)
++.++|.+ +||+.+++...
T Consensus 249 ~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 249 QFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp GHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHHHhcCCCceEEEEecc
Confidence 99999998 99998877644
No 85
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.46 E-value=3e-08 Score=66.46 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=37.5
Q ss_pred ceeEEEec-ccccCCCh-----HHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQ-WMLHNFDD-----ENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~-~vlh~~~d-----~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++. +++|++++ ++..++|+++++.|+|||.+++..+
T Consensus 130 ~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 130 GFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 68999998 89999998 7789999999999999999998764
No 86
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.45 E-value=8.2e-07 Score=56.30 Aligned_cols=77 Identities=4% Similarity=-0.090 Sum_probs=54.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++. +++++.++..++|+++++.|+|||++++.++...... + ..+.. ......++.+++.+
T Consensus 94 ~fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-------~--~~~~~----~~~~~~~~~~~l~~ 158 (202)
T 2kw5_A 94 AWEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ-------Y--NTGGP----KDLDLLPKLETLQS 158 (202)
T ss_dssp TCSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGG-------G--TSCCS----SSGGGCCCHHHHHH
T ss_pred CccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecccccc-------C--CCCCC----CcceeecCHHHHHH
Confidence 58999984 3455777789999999999999999999886543211 0 00000 00123579999999
Q ss_pred HHHHcCCCceEEEE
Q 042267 82 LAIEAGFKGINFEC 95 (107)
Q Consensus 82 ll~~aGf~~~~~~~ 95 (107)
+|+ ||+++++..
T Consensus 159 ~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 159 ELP--SLNWLIANN 170 (202)
T ss_dssp HCS--SSCEEEEEE
T ss_pred Hhc--CceEEEEEE
Confidence 998 999987653
No 87
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.44 E-value=5.8e-07 Score=59.73 Aligned_cols=75 Identities=9% Similarity=-0.126 Sum_probs=56.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+...++|.+++++..++++++++.|+|||+++++....+...... .....+.+|+.+
T Consensus 152 ~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g------------------~~~~~~~~el~~ 213 (252)
T 2gb4_A 152 KFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAG------------------PPFYVPSAELKR 213 (252)
T ss_dssp CEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCC------------------SSCCCCHHHHHH
T ss_pred CEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCC------------------CCCCCCHHHHHH
Confidence 58999999999999988888999999999999999987655432211000 001257899999
Q ss_pred HHHHcCCCceEEEE
Q 042267 82 LAIEAGFKGINFEC 95 (107)
Q Consensus 82 ll~~aGf~~~~~~~ 95 (107)
+|++ +|++.....
T Consensus 214 ~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 214 LFGT-KCSMQCLEE 226 (252)
T ss_dssp HHTT-TEEEEEEEE
T ss_pred HhhC-CeEEEEEec
Confidence 9987 699876653
No 88
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.30 E-value=2.1e-06 Score=55.82 Aligned_cols=81 Identities=11% Similarity=0.018 Sum_probs=53.5
Q ss_pred ceeEEEecccccCCChH-HHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHH
Q 042267 2 QVYLSILQWMLHNFDDE-NCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFT 80 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~ 80 (107)
.+|+|+ |++++. ....+++++++.|+|||++++. ......+..++. . ....+++.
T Consensus 143 ~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~------~------------~~~~~~l~ 198 (230)
T 1fbn_A 143 KVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDP------K------------EIFKEQKE 198 (230)
T ss_dssp CEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCH------H------------HHHHHHHH
T ss_pred cEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCH------H------------HhhHHHHH
Confidence 478887 666654 3467799999999999999997 221111111100 0 01136777
Q ss_pred HHHHHcCCCceEEEEcCCc---eeEEEEEC
Q 042267 81 ALAIEAGFKGINFECNVCN---SYVMEFYK 107 (107)
Q Consensus 81 ~ll~~aGf~~~~~~~~~~~---~~vi~~~~ 107 (107)
+|+++||+..+..++.++ +.++.++|
T Consensus 199 -~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 199 -ILEAGGFKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp -HHHHHTEEEEEEEECTTTSTTEEEEEEEE
T ss_pred -HHHHCCCEEEEEEccCCCccceEEEEEEe
Confidence 899999999998887654 67776653
No 89
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.27 E-value=7.9e-07 Score=56.63 Aligned_cols=72 Identities=11% Similarity=-0.034 Sum_probs=57.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++...+|+ ...+++++++.|+|||++++.+.... +.+++.+
T Consensus 125 ~fD~i~~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~ 170 (205)
T 3grz_A 125 KFDLIVANILAEI-----LLDLIPQLDSHLNEDGQVIFSGIDYL-----------------------------QLPKIEQ 170 (205)
T ss_dssp CEEEEEEESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEEGG-----------------------------GHHHHHH
T ss_pred CceEEEECCcHHH-----HHHHHHHHHHhcCCCCEEEEEecCcc-----------------------------cHHHHHH
Confidence 5899999877754 46889999999999999998654321 2467889
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+++++||+.+++.......+++.-+|
T Consensus 171 ~~~~~Gf~~~~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 171 ALAENSFQIDLKMRAGRWIGLAISRK 196 (205)
T ss_dssp HHHHTTEEEEEEEEETTEEEEEEEEC
T ss_pred HHHHcCCceEEeeccCCEEEEEEecc
Confidence 99999999999888777777776654
No 90
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.25 E-value=1.8e-06 Score=55.10 Aligned_cols=77 Identities=14% Similarity=0.045 Sum_probs=51.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.+++|++++ ..++|+++++.|+|||++++.++... . ............-.........+|.+++++
T Consensus 95 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 167 (211)
T 2gs9_A 95 SFDVVLLFTTLEFVED--VERVLLEARRVLRPGGALVVGVLEAL-S----PWAALYRRLGEKGVLPWAQARFLAREDLKA 167 (211)
T ss_dssp CEEEEEEESCTTTCSC--HHHHHHHHHHHEEEEEEEEEEEECTT-S----HHHHHHHHHHHTTCTTGGGCCCCCHHHHHH
T ss_pred cEEEEEEcChhhhcCC--HHHHHHHHHHHcCCCCEEEEEecCCc-C----cHHHHHHHHhhccCccccccccCCHHHHHH
Confidence 5899999999999987 47999999999999999999875432 1 111100000000000001245589999999
Q ss_pred HHHHcC
Q 042267 82 LAIEAG 87 (107)
Q Consensus 82 ll~~aG 87 (107)
+|+ |
T Consensus 168 ~l~--G 171 (211)
T 2gs9_A 168 LLG--P 171 (211)
T ss_dssp HHC--S
T ss_pred Hhc--C
Confidence 998 8
No 91
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.07 E-value=2.8e-06 Score=57.52 Aligned_cols=41 Identities=20% Similarity=0.194 Sum_probs=36.3
Q ss_pred ceeEEEecccccCC--ChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNF--DDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~--~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|+...++|.. +.++...+|+++++.|+|||.+++..+
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 58999999999987 446678999999999999999998765
No 92
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.06 E-value=2.6e-06 Score=57.36 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=36.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
.||+|+..+++++++++...+++++++++|+|||.+++
T Consensus 213 ~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 213 PFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 58999999999999998889999999999999999987
No 93
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.05 E-value=3.5e-06 Score=53.89 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=36.8
Q ss_pred ceeEEEecccccCCCh-HHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDD-ENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++.+++|++++ ++..++|+++++.|+|||.+++..+
T Consensus 114 ~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 114 LFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp CEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 5899999999999997 5567999999999999999998764
No 94
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.03 E-value=2.3e-06 Score=57.58 Aligned_cols=82 Identities=16% Similarity=0.162 Sum_probs=51.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhh-CCCcee--cCHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQ-IPHGRE--RTKKE 78 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~--rt~~e 78 (107)
.||+|++..++|++ + ..++++++++.|+|||.+++.+...+.....+.... .+.-..... ..+... .+.+.
T Consensus 113 ~fD~V~~~~~l~~~-~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~w~~p~~~~ 186 (299)
T 3g5t_A 113 KIDMITAVECAHWF-D--FEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDD---LMIEVPYGKQGLGPYWEQPGRSR 186 (299)
T ss_dssp CEEEEEEESCGGGS-C--HHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTT---HHHHHHHCTTTTGGGSCTTHHHH
T ss_pred CeeEEeHhhHHHHh-C--HHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHH---HHHHhccCcccccchhhchhhHH
Confidence 59999999999999 4 579999999999999999996554322211111111 111100000 001111 34567
Q ss_pred HHHHHHHcCCC
Q 042267 79 FTALAIEAGFK 89 (107)
Q Consensus 79 ~~~ll~~aGf~ 89 (107)
++++++++||.
T Consensus 187 ~~~~l~~~gfp 197 (299)
T 3g5t_A 187 LRNMLKDSHLD 197 (299)
T ss_dssp HHTTTTTCCCC
T ss_pred HHHhhhccCCC
Confidence 79999999994
No 95
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.91 E-value=2.2e-05 Score=51.76 Aligned_cols=81 Identities=10% Similarity=-0.019 Sum_probs=48.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.+|+++.. +++..+ ...+++++++.|||||+++|.......+...++ + ...++-.+
T Consensus 147 ~vDvVf~d--~~~~~~--~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~-------------------~-~~~~~ev~ 202 (233)
T 4df3_A 147 GVDGLYAD--VAQPEQ--AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEP-------------------S-EVYKREIK 202 (233)
T ss_dssp CEEEEEEC--CCCTTH--HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCC-------------------C-HHHHHHHH
T ss_pred eEEEEEEe--ccCChh--HHHHHHHHHHhccCCCEEEEEEecccCCCCCCh-------------------H-HHHHHHHH
Confidence 36777642 333333 568999999999999999986532211110000 0 00123356
Q ss_pred HHHHcCCCceEEEEcCC---ceeEEEEE
Q 042267 82 LAIEAGFKGINFECNVC---NSYVMEFY 106 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~---~~~vi~~~ 106 (107)
.|+++||+..+...+.+ .|.++.++
T Consensus 203 ~L~~~GF~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 203 TLMDGGLEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp HHHHTTCCEEEEEECTTTSTTEEEEEEC
T ss_pred HHHHCCCEEEEEEccCCCCCceEEEEEE
Confidence 67889999998887744 46666553
No 96
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.85 E-value=9.6e-06 Score=55.15 Aligned_cols=41 Identities=20% Similarity=0.344 Sum_probs=35.1
Q ss_pred ceeEEEecccccC-CChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHN-FDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~-~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|+...++|. ++.++..++|+++++.|+|||.+++..+
T Consensus 129 ~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5899999999986 4545568999999999999999988765
No 97
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.82 E-value=2.1e-05 Score=52.59 Aligned_cols=40 Identities=10% Similarity=0.158 Sum_probs=36.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++..++|+++.++....++++++.| |||++++.-.
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 589999999999999988999999999999 9999998743
No 98
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.82 E-value=4.1e-05 Score=47.60 Aligned_cols=75 Identities=15% Similarity=0.122 Sum_probs=53.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++...+|. ..+....+++++++.|+|||++++...... ...++.+
T Consensus 119 ~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~ 168 (194)
T 1dus_A 119 KYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ-----------------------------GAKSLAK 168 (194)
T ss_dssp CEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTH-----------------------------HHHHHHH
T ss_pred CceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCC-----------------------------ChHHHHH
Confidence 5899999888774 445578999999999999999999764321 0134666
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
++++. |..+++......+.++.++|
T Consensus 169 ~l~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 169 YMKDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHHHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHHHH-hcceEEEecCCcEEEEEEee
Confidence 67766 66666666656667776664
No 99
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.81 E-value=1.7e-05 Score=52.87 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=35.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 45 (107)
.||+|+...++|.++. .++++++++.|+|||+++++.+..+
T Consensus 99 sfD~v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 99 SVDVAIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CEEEEEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cccEEEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 5899999999988765 4789999999999999999886543
No 100
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.81 E-value=6.6e-05 Score=50.97 Aligned_cols=70 Identities=13% Similarity=0.100 Sum_probs=46.0
Q ss_pred ceeEEEecccccCCChHHH--HHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHH
Q 042267 2 QVYLSILQWMLHNFDDENC--IKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEF 79 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~ 79 (107)
.||+|++....+.+++... .+++++++++|+|||.+++... ++. .+ ..+.+++
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~----~~~----------~~-----------~~~~~~~ 223 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE----SIW----------LD-----------LELIEKM 223 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC----CTT----------TC-----------HHHHHHH
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC----Ccc----------cc-----------hHHHHHH
Confidence 5899999777666654332 6899999999999999988631 110 00 1135788
Q ss_pred HHHHHHcCCCceEEEEc
Q 042267 80 TALAIEAGFKGINFECN 96 (107)
Q Consensus 80 ~~ll~~aGf~~~~~~~~ 96 (107)
.+.++++||..+++...
T Consensus 224 ~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 224 SRFIRETGFASVQYALM 240 (304)
T ss_dssp HHHHHHHTCSEEEEEEC
T ss_pred HHHHHhCCCCcEEEEEe
Confidence 99999999998877644
No 101
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.79 E-value=7.2e-05 Score=48.16 Aligned_cols=81 Identities=12% Similarity=0.000 Sum_probs=51.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||++++... ..+....+++++++.|+|||++++. .........++ . ...+.+++.+
T Consensus 143 ~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~-------~-----------~~~~~~~l~~ 199 (227)
T 1g8a_A 143 KVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTKE-------P-----------EQVFREVERE 199 (227)
T ss_dssp CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTSC-------H-----------HHHHHHHHHH
T ss_pred CceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCCC-------h-----------hhhhHHHHHH
Confidence 4799885433 2223456699999999999999998 32211111110 0 0123567777
Q ss_pred HHHHcCCCceEEEEcCCc---eeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCN---SYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~---~~vi~~~~ 107 (107)
+ +++ |+.++...+.++ +..+.++|
T Consensus 200 l-~~~-f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 200 L-SEY-FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp H-HTT-SEEEEEEECTTTSSSEEEEEEEC
T ss_pred H-Hhh-ceeeeEeccCcccCCCEEEEEEe
Confidence 7 777 999988887655 67777654
No 102
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.78 E-value=0.00015 Score=45.00 Aligned_cols=74 Identities=14% Similarity=0.094 Sum_probs=54.6
Q ss_pred ceeEEEecccccCCChH-------HHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceec
Q 042267 2 QVYLSILQWMLHNFDDE-------NCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRER 74 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~-------~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r 74 (107)
.||+++++..+|..++. +...+++++.+.| |||++++.+... .
T Consensus 78 ~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-----------------------------~ 127 (170)
T 3q87_B 78 SVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-----------------------------N 127 (170)
T ss_dssp GCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-----------------------------G
T ss_pred CCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-----------------------------C
Confidence 58999999888865554 4577899999999 999999877221 1
Q ss_pred CHHHHHHHHHHcCCCceEEEEc-CCceeEEEE
Q 042267 75 TKKEFTALAIEAGFKGINFECN-VCNSYVMEF 105 (107)
Q Consensus 75 t~~e~~~ll~~aGf~~~~~~~~-~~~~~vi~~ 105 (107)
+.+++.++++++||+...+... .+.-.++..
T Consensus 128 ~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~ 159 (170)
T 3q87_B 128 RPKEVLARLEERGYGTRILKVRKILGETVYII 159 (170)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEEECSSSEEEEE
T ss_pred CHHHHHHHHHHCCCcEEEEEeeccCCceEEEE
Confidence 3468899999999998877654 344444443
No 103
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.78 E-value=3.7e-06 Score=54.76 Aligned_cols=42 Identities=12% Similarity=0.110 Sum_probs=33.5
Q ss_pred ceeEEEe-ccc--ccCCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSIL-QWM--LHNFDDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~-~~v--lh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|++ .+. .+++.......+++++++.|+|||++++++..
T Consensus 128 ~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 128 HFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 5899998 554 45555555678999999999999999987754
No 104
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.78 E-value=0.00017 Score=47.91 Aligned_cols=76 Identities=14% Similarity=0.024 Sum_probs=54.7
Q ss_pred ceeEEEecc-------------cccCCCh----------HHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhh
Q 042267 2 QVYLSILQW-------------MLHNFDD----------ENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSF 58 (107)
Q Consensus 2 ~~D~v~~~~-------------vlh~~~d----------~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~ 58 (107)
.||+|++.. ++++.+. +...++++++.+.|+|||.+++.. .
T Consensus 176 ~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~------~---------- 239 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH------G---------- 239 (276)
T ss_dssp CEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC------C----------
T ss_pred CccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE------C----------
Confidence 589999873 4444332 345889999999999999998741 0
Q ss_pred hhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEEEE-cCCceeEEEEEC
Q 042267 59 ILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFEC-NVCNSYVMEFYK 107 (107)
Q Consensus 59 ~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~-~~~~~~vi~~~~ 107 (107)
. .+.+++.++++++||+.+++.. ..+...++.+++
T Consensus 240 ---------~-----~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 240 ---------W-----QQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp ---------S-----SCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred ---------c-----hHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 0 1357889999999999887764 456667766653
No 105
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.77 E-value=1.2e-05 Score=52.17 Aligned_cols=81 Identities=11% Similarity=-0.036 Sum_probs=49.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++... ..+....+++++++.|+|||++++ ............. . .+-..+ .+
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i-~~~~~~~~~~~~~------~------------~~~~~~-~~ 202 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVI-SIKANCIDSTASA------E------------AVFASE-VK 202 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEE-EEEHHHHCSSSCH------H------------HHHHHH-HH
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEE-EEcccccccCCCH------H------------HHHHHH-HH
Confidence 4899987433 333456789999999999999988 3221100000000 0 000123 58
Q ss_pred HHHHcCCCceEEEEcCCc---eeEEEEE
Q 042267 82 LAIEAGFKGINFECNVCN---SYVMEFY 106 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~---~~vi~~~ 106 (107)
+|+++||+..+..+..++ +.++.++
T Consensus 203 ~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 203 KMQQENMKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp TTGGGTEEEEEEEECTTTSSSEEEEEEE
T ss_pred HHHHCCCceEEEEecCCccCCcEEEEEE
Confidence 899999999987776443 6666654
No 106
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.74 E-value=7.5e-05 Score=49.33 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=52.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+.....| ....+++++++.|+|||++++.+...+ +.+++.+
T Consensus 184 ~fD~Vv~n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~~~-----------------------------~~~~v~~ 229 (254)
T 2nxc_A 184 PFDLLVANLYAE-----LHAALAPRYREALVPGGRALLTGILKD-----------------------------RAPLVRE 229 (254)
T ss_dssp CEEEEEEECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEEGG-----------------------------GHHHHHH
T ss_pred CCCEEEECCcHH-----HHHHHHHHHHHHcCCCCEEEEEeeccC-----------------------------CHHHHHH
Confidence 589998754433 357899999999999999999754321 2578899
Q ss_pred HHHHcCCCceEEEEcCCceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCNSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~~~vi~~~~ 107 (107)
+++++||+..++.......+ +.++|
T Consensus 230 ~l~~~Gf~~~~~~~~~~W~~-l~~~k 254 (254)
T 2nxc_A 230 AMAGAGFRPLEEAAEGEWVL-LAYGR 254 (254)
T ss_dssp HHHHTTCEEEEEEEETTEEE-EEEEC
T ss_pred HHHHCCCEEEEEeccCCeEE-EEEEC
Confidence 99999999998876654443 44443
No 107
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.65 E-value=0.00011 Score=49.98 Aligned_cols=79 Identities=18% Similarity=0.286 Sum_probs=50.2
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCch-hhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTE-ASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+|++++...+|+. ..+|+++++.|+|||+++++ +.|.....+. ..+.....|-. -..++.+++.+
T Consensus 152 fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l--vkPqfe~~~~~~~~~G~vrd~~-------~~~~~~~~v~~ 217 (291)
T 3hp7_A 152 PSFASIDVSFISL-----NLILPALAKILVDGGQVVAL--VKPQFEAGREQIGKNGIVRESS-------IHEKVLETVTA 217 (291)
T ss_dssp CSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE--ECGGGTSCGGGCC-CCCCCCHH-------HHHHHHHHHHH
T ss_pred CCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE--ECcccccChhhcCCCCccCCHH-------HHHHHHHHHHH
Confidence 7999887777754 57999999999999999886 2232221110 00000000100 01246789999
Q ss_pred HHHHcCCCceEEEE
Q 042267 82 LAIEAGFKGINFEC 95 (107)
Q Consensus 82 ll~~aGf~~~~~~~ 95 (107)
+++++||++..+..
T Consensus 218 ~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 218 FAVDYGFSVKGLDF 231 (291)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHCCCEEEEEEE
Confidence 99999999877653
No 108
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.58 E-value=0.00018 Score=45.56 Aligned_cols=53 Identities=13% Similarity=0.108 Sum_probs=41.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+++....++ +..++++++++.|+|||++++..... .+.+++.+
T Consensus 108 ~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~~~~~~~~ 153 (204)
T 3e05_A 108 DPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL-----------------------------DTLTKAVE 153 (204)
T ss_dssp CCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH-----------------------------HHHHHHHH
T ss_pred CCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc-----------------------------ccHHHHHH
Confidence 589999888776 35789999999999999999854221 02467788
Q ss_pred HHHHcCC
Q 042267 82 LAIEAGF 88 (107)
Q Consensus 82 ll~~aGf 88 (107)
+++++||
T Consensus 154 ~l~~~g~ 160 (204)
T 3e05_A 154 FLEDHGY 160 (204)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 8999998
No 109
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.58 E-value=2.8e-06 Score=55.62 Aligned_cols=75 Identities=13% Similarity=-0.023 Sum_probs=45.1
Q ss_pred ceeEEEe-----cccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCH
Q 042267 2 QVYLSIL-----QWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTK 76 (107)
Q Consensus 2 ~~D~v~~-----~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~ 76 (107)
.||.+++ ...++++++ ...+++++++.|||||+++..+......... ..++ .-.....
T Consensus 128 ~FD~i~~D~~~~~~~~~~~~~--~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~-------~~~~--------~~~~~~~ 190 (236)
T 3orh_A 128 HFDGILYDTYPLSEETWHTHQ--FNFIKNHAFRLLKPGGVLTYCNLTSWGELMK-------SKYS--------DITIMFE 190 (236)
T ss_dssp CEEEEEECCCCCBGGGTTTHH--HHHHHHTHHHHEEEEEEEEECCHHHHHHHTT-------TTCS--------CHHHHHH
T ss_pred CCceEEEeeeecccchhhhcc--hhhhhhhhhheeCCCCEEEEEecCCchhhhh-------hhhh--------hhhhhhH
Confidence 4777764 444555555 5799999999999999998754321100000 0000 0011124
Q ss_pred HHHHHHHHHcCCCceEE
Q 042267 77 KEFTALAIEAGFKGINF 93 (107)
Q Consensus 77 ~e~~~ll~~aGf~~~~~ 93 (107)
+.+...|.++||+...+
T Consensus 191 ~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 191 ETQVPALLEAGFRRENI 207 (236)
T ss_dssp HHTHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHcCCeEEEE
Confidence 56777888999997654
No 110
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.57 E-value=3.1e-05 Score=49.05 Aligned_cols=42 Identities=12% Similarity=0.161 Sum_probs=35.8
Q ss_pred ceeEEEecccccCCC-------------hHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFD-------------DENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~-------------d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|+...++|... .++..++|+++++.|+|||++++.++.
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 589999999887665 445789999999999999999998854
No 111
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.51 E-value=0.00018 Score=44.53 Aligned_cols=55 Identities=22% Similarity=0.215 Sum_probs=42.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||++++...+|+ ...+++++.+.|+|||++++..... .+..++.+
T Consensus 100 ~~D~v~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~~~~-----------------------------~~~~~~~~ 145 (192)
T 1l3i_A 100 DIDIAVVGGSGGE-----LQEILRIIKDKLKPGGRIIVTAILL-----------------------------ETKFEAME 145 (192)
T ss_dssp CEEEEEESCCTTC-----HHHHHHHHHHTEEEEEEEEEEECBH-----------------------------HHHHHHHH
T ss_pred CCCEEEECCchHH-----HHHHHHHHHHhcCCCcEEEEEecCc-----------------------------chHHHHHH
Confidence 5899999887764 3689999999999999998865320 01357788
Q ss_pred HHHHcCCCc
Q 042267 82 LAIEAGFKG 90 (107)
Q Consensus 82 ll~~aGf~~ 90 (107)
++++.||..
T Consensus 146 ~l~~~g~~~ 154 (192)
T 1l3i_A 146 CLRDLGFDV 154 (192)
T ss_dssp HHHHTTCCC
T ss_pred HHHHCCCce
Confidence 899999954
No 112
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.51 E-value=0.00029 Score=45.25 Aligned_cols=67 Identities=12% Similarity=0.116 Sum_probs=45.6
Q ss_pred ceeEEEecccccCCChHH-----------------HHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHH
Q 042267 2 QVYLSILQWMLHNFDDEN-----------------CIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIF 64 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~-----------------~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~ 64 (107)
.||+|++.-.+|..++.+ ..++++++.+.|+|||++++.-+. ..
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~---------------- 183 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD---KE---------------- 183 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES---CH----------------
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc---cH----------------
Confidence 589999887766554422 378999999999999999986211 10
Q ss_pred HhhCCCceecCHHHHHHHHHHcCCCceEEEEc
Q 042267 65 LIQIPHGRERTKKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 65 ~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 96 (107)
...+++.+++++.||+...+...
T Consensus 184 ---------~~~~~~~~~l~~~g~~~~~~~~~ 206 (230)
T 3evz_A 184 ---------KLLNVIKERGIKLGYSVKDIKFK 206 (230)
T ss_dssp ---------HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ---------hHHHHHHHHHHHcCCceEEEEec
Confidence 12468889999999977665443
No 113
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.48 E-value=0.00015 Score=45.69 Aligned_cols=56 Identities=7% Similarity=-0.105 Sum_probs=38.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHH--HcCCCceEEEEc-C
Q 042267 21 IKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAI--EAGFKGINFECN-V 97 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~--~aGf~~~~~~~~-~ 97 (107)
.++++++++.|+|||++++++... ...+++.++++ ++||..+++.+. .
T Consensus 144 ~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~~~~~~~~~l~~~~~gf~~~~~~~~~~ 194 (215)
T 4dzr_A 144 RRMAALPPYVLARGRAGVFLEVGH-----------------------------NQADEVARLFAPWRERGFRVRKVKDLR 194 (215)
T ss_dssp HHHHTCCGGGBCSSSEEEEEECTT-----------------------------SCHHHHHHHTGGGGGGTEECCEEECTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEECC-----------------------------ccHHHHHHHHHHhhcCCceEEEEEecC
Confidence 789999999999999966655310 02356677788 889988777654 3
Q ss_pred CceeEEEE
Q 042267 98 CNSYVMEF 105 (107)
Q Consensus 98 ~~~~vi~~ 105 (107)
+...++.+
T Consensus 195 ~~~r~~~~ 202 (215)
T 4dzr_A 195 GIDRVIAV 202 (215)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 44444444
No 114
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.47 E-value=0.00037 Score=45.78 Aligned_cols=82 Identities=12% Similarity=-0.029 Sum_probs=46.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++.-.. ++ ....+++++++.|+|||++++.-.....+... .-.+ ..++..+
T Consensus 146 ~~D~I~~d~a~---~~-~~~il~~~~~~~LkpGG~lvisik~~~~d~t~-------------------~~~e-~~~~~~~ 201 (232)
T 3id6_C 146 NVDVLYVDIAQ---PD-QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTK-------------------DPKE-IYKTEVE 201 (232)
T ss_dssp CEEEEEECCCC---TT-HHHHHHHHHHHHEEEEEEEEEEEC-------C-------------------CSSS-STTHHHH
T ss_pred ceEEEEecCCC---hh-HHHHHHHHHHHhCCCCeEEEEEEccCCcccCC-------------------CHHH-HHHHHHH
Confidence 47888765332 22 23445567777999999999873111100000 0000 0123455
Q ss_pred HHHHcCCCceEEEEcCCc---eeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVCN---SYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~~---~~vi~~~~ 107 (107)
.|+++||+..+...+.++ +.++.++|
T Consensus 202 ~L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 202 KLENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp HHHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred HHHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 667889999998888544 77777653
No 115
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.38 E-value=0.00014 Score=47.36 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=33.3
Q ss_pred ceeEEEec-ccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQ-WMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~-~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|++. ..+|.++.++..++|+++++.|+|||.+++.
T Consensus 105 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 105 EFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp CEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 58999976 4667778778899999999999999998764
No 116
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.37 E-value=6.4e-05 Score=49.47 Aligned_cols=41 Identities=10% Similarity=0.054 Sum_probs=33.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|++.++++++.++ ...+|+++++.|+|||++++..+.
T Consensus 114 ~fD~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 114 AFEAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CEEEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CEEEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 58999998876666333 689999999999999999987654
No 117
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.33 E-value=0.00011 Score=50.64 Aligned_cols=41 Identities=12% Similarity=0.253 Sum_probs=35.9
Q ss_pred ceeEEEecccccC---CChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHN---FDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++...+|+ ++.+...++++++++.|+|||+++++..
T Consensus 261 ~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 5899999999987 3556688999999999999999999764
No 118
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.33 E-value=0.00022 Score=50.84 Aligned_cols=44 Identities=7% Similarity=0.079 Sum_probs=36.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVP 48 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~ 48 (107)
.+|+|++.++++ + ++....|+++++.|+|||++++.|...+++.
T Consensus 252 ~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 252 NTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp TCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred CccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 479999888764 3 3357778999999999999999999887654
No 119
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.27 E-value=0.00036 Score=53.70 Aligned_cols=41 Identities=5% Similarity=0.136 Sum_probs=36.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|++..++|+++++....+++++++.|+|| .+++..+.
T Consensus 796 sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 796 DVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp SCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred CeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 589999999999999998889999999999999 77666543
No 120
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.25 E-value=0.00013 Score=46.70 Aligned_cols=65 Identities=14% Similarity=0.035 Sum_probs=39.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEEEEc
Q 042267 21 IKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 96 (107)
..+|+++++.|+|||++++.-......+..+ .. .+. .........+++.++++++||++.++..+
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---~~---~~~-----~~~~~~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 120 PEMLRGMAAVCRPGASFLVALNLHAWRPSVP---EV---GEH-----PEPTPDSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp SHHHHHHHHTEEEEEEEEEEEEGGGBTTBCG---GG---TTC-----CCCCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEecccccccccc---cc---ccC-----CccchHHHHHHHHHHHHHcCCCceeeecc
Confidence 6899999999999999998432221111110 00 000 00111223456888999999999887654
No 121
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.25 E-value=0.00026 Score=43.52 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=29.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++...+|+ ..+++++++.|+|||++++.+.
T Consensus 94 ~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 94 NPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEee
Confidence 5899999999887 5799999999999999988663
No 122
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.18 E-value=0.00042 Score=43.48 Aligned_cols=42 Identities=17% Similarity=0.144 Sum_probs=31.6
Q ss_pred ceeEEEeccccc-------CCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLH-------NFDDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh-------~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||++++...+. ....++..++++++.+.|+|||++++..+.
T Consensus 93 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 93 PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 589999876551 112334577999999999999999998754
No 123
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.16 E-value=0.0014 Score=42.01 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=47.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+.. +.+ .++...+++++++.|+|||++++.-...+.+.. . .....-.++++.
T Consensus 126 ~fD~V~~~-~~~---~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~----------~---------~~~~~~~~~~~~ 182 (210)
T 1nt2_A 126 KVDLIYQD-IAQ---KNQIEILKANAEFFLKEKGEVVIMVKARSIDST----------A---------EPEEVFKSVLKE 182 (210)
T ss_dssp CEEEEEEC-CCS---TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTT----------S---------CHHHHHHHHHHH
T ss_pred ceeEEEEe-ccC---hhHHHHHHHHHHHHhCCCCEEEEEEecCCcccc----------C---------CHHHHHHHHHHH
Confidence 58999876 322 233456799999999999999997321100000 0 000000123333
Q ss_pred HHHHcCCCceEEEEcCC---ceeEEEEEC
Q 042267 82 LAIEAGFKGINFECNVC---NSYVMEFYK 107 (107)
Q Consensus 82 ll~~aGf~~~~~~~~~~---~~~vi~~~~ 107 (107)
++++ |++.+.....+ .+.++.+++
T Consensus 183 -l~~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 183 -MEGD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp -HHTT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred -HHhh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 7778 99999887743 566666653
No 124
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.09 E-value=0.00091 Score=43.68 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=33.4
Q ss_pred ceeEEEecccccCCCh-------HHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDD-------ENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|+....++...+ +....+++++++.|+|||++++++..
T Consensus 168 ~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 168 APDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 5899999876654432 55789999999999999999986543
No 125
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.07 E-value=0.00012 Score=61.39 Aligned_cols=83 Identities=12% Similarity=0.039 Sum_probs=32.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+.+++||..++ ..+.|+++++.|+|||++++.+...+..-.. ....++.. . ..++...+.++|.+
T Consensus 1311 ~ydlvia~~vl~~t~~--~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~-----~~~~~~~~-~--r~~~~~~~~~~w~~ 1380 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGD--PAVAVGNMAATLKEGGFLLLHTLLAGHPLGE-----MVGFLTSP-E--QGGRHLLSQDQWES 1380 (2512)
T ss_dssp -CCEEEEECC----------------------CCEEEEEEC----------------------------------CTTTT
T ss_pred ceeEEEEccccccccc--HHHHHHHHHHhcCCCcEEEEEeccccccccc-----cccccccc-c--ccCCcccCHHHHHH
Confidence 4899999999998877 3678999999999999999987532100000 00001100 0 00122356789999
Q ss_pred HHHHcCCCceEEE
Q 042267 82 LAIEAGFKGINFE 94 (107)
Q Consensus 82 ll~~aGf~~~~~~ 94 (107)
+|+++||+.+...
T Consensus 1381 ~l~~~gf~~~~~~ 1393 (2512)
T 2vz8_A 1381 LFAGASLHLVALK 1393 (2512)
T ss_dssp SSTTTTEEEEEEE
T ss_pred HHHhCCCceeeec
Confidence 9999999887654
No 126
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.05 E-value=5.9e-05 Score=48.72 Aligned_cols=56 Identities=9% Similarity=0.054 Sum_probs=39.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+.. . +...+|+++++.|+|||+++... ...+.+++.+
T Consensus 111 ~fD~v~~~------~--~~~~~l~~~~~~LkpgG~l~~~~------------------------------~~~~~~~~~~ 152 (226)
T 3m33_A 111 PFGLIVSR------R--GPTSVILRLPELAAPDAHFLYVG------------------------------PRLNVPEVPE 152 (226)
T ss_dssp CEEEEEEE------S--CCSGGGGGHHHHEEEEEEEEEEE------------------------------SSSCCTHHHH
T ss_pred CEEEEEeC------C--CHHHHHHHHHHHcCCCcEEEEeC------------------------------CcCCHHHHHH
Confidence 58999876 1 24688999999999999998000 0013457788
Q ss_pred HHHHcCCCceEEEE
Q 042267 82 LAIEAGFKGINFEC 95 (107)
Q Consensus 82 ll~~aGf~~~~~~~ 95 (107)
+++++||+..++..
T Consensus 153 ~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 153 RLAAVGWDIVAEDH 166 (226)
T ss_dssp HHHHTTCEEEEEEE
T ss_pred HHHHCCCeEEEEEe
Confidence 88888888776643
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.05 E-value=0.00092 Score=43.39 Aligned_cols=67 Identities=12% Similarity=0.050 Sum_probs=37.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEEEEc
Q 042267 21 IKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 96 (107)
..+|+++++.|+|||++++....... ....+. ...+.. . . .......+++.++++++||++.++...
T Consensus 119 ~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~~~~----~~~~~~-~--~-~~~~~~~~el~~~l~~aGf~v~~~~~~ 185 (225)
T 3p2e_A 119 RDILSNVADLAKKEAHFEFVTTYSDS-YEEAEI----KKRGLP-L--L-SKAYFLSEQYKAELSNSGFRIDDVKEL 185 (225)
T ss_dssp HHHHHHHHTTEEEEEEEEEEECCCC----------------------C-CHHHHHSHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccc-chhchh----hhcCCC-C--C-ChhhcchHHHHHHHHHcCCCeeeeeec
Confidence 46899999999999999995433322 111000 000000 0 0 000111236999999999998877644
No 128
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.03 E-value=0.0008 Score=40.83 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=34.1
Q ss_pred ceeEEEecccccCCChHH---------HHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDEN---------CIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~---------~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|+....+|..++.. ...+++++.+.|+|||.+++..+.
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 589999998888765531 168999999999999999987643
No 129
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.02 E-value=0.00063 Score=43.78 Aligned_cols=38 Identities=11% Similarity=0.023 Sum_probs=32.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||++++.+++|.. ++ ....+.+++++|+|||.++..+
T Consensus 115 ~~DvVLa~k~LHlL-~~-~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 115 TYDVVFLLKMLPVL-KQ-QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEEEEEETCHHHH-HH-TTCCHHHHHHTCEEEEEEEEEE
T ss_pred CcChhhHhhHHHhh-hh-hHHHHHHHHHHhCCCCEEEEeC
Confidence 58999999999999 43 3555669999999999998887
No 130
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.01 E-value=0.0032 Score=41.36 Aligned_cols=75 Identities=8% Similarity=-0.039 Sum_probs=48.7
Q ss_pred ceeEEEecccccCC------------------ChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHH
Q 042267 2 QVYLSILQWMLHNF------------------DDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAI 63 (107)
Q Consensus 2 ~~D~v~~~~vlh~~------------------~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~ 63 (107)
.||+|++.-.++.. .......+++.+.+.|+|||+++++- +..
T Consensus 119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~---~~~---------------- 179 (259)
T 3lpm_A 119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH---RPE---------------- 179 (259)
T ss_dssp CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE---CTT----------------
T ss_pred CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE---cHH----------------
Confidence 58999986443322 11335689999999999999999842 111
Q ss_pred HHhhCCCceecCHHHHHHHHHHcCCCceEEEEc------CCceeEEEEE
Q 042267 64 FLIQIPHGRERTKKEFTALAIEAGFKGINFECN------VCNSYVMEFY 106 (107)
Q Consensus 64 ~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~------~~~~~vi~~~ 106 (107)
...++.+++++.||...++.++ .....+++++
T Consensus 180 -----------~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 217 (259)
T 3lpm_A 180 -----------RLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGI 217 (259)
T ss_dssp -----------THHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEE
T ss_pred -----------HHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEE
Confidence 1356777888889988776654 1234556554
No 131
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.96 E-value=0.00087 Score=47.85 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=34.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEV 47 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~ 47 (107)
.||+|++.+.++ . ++....|+++.+.|+|||++++.+...+..
T Consensus 323 ~FDvIvvn~~l~--~-~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 323 QCDVILVNNFLF--D-EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp GCSEEEECCTTC--C-HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred CCCEEEEeCccc--c-ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 589999887773 2 345678899999999999999998776654
No 132
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.96 E-value=0.0011 Score=43.15 Aligned_cols=61 Identities=7% Similarity=0.033 Sum_probs=43.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++..+ .+ ...+++.+++.|+|||++++.+. .... ...+++.+
T Consensus 141 ~fD~V~~~~~----~~--~~~~l~~~~~~LkpgG~l~~~~g-----~~~~----------------------~~~~~~~~ 187 (240)
T 1xdz_A 141 SYDIVTARAV----AR--LSVLSELCLPLVKKNGLFVALKA-----ASAE----------------------EELNAGKK 187 (240)
T ss_dssp CEEEEEEECC----SC--HHHHHHHHGGGEEEEEEEEEEEC-----C-CH----------------------HHHHHHHH
T ss_pred CccEEEEecc----CC--HHHHHHHHHHhcCCCCEEEEEeC-----CCch----------------------HHHHHHHH
Confidence 5899998763 33 57899999999999999988631 1000 01256778
Q ss_pred HHHHcCCCceEEEE
Q 042267 82 LAIEAGFKGINFEC 95 (107)
Q Consensus 82 ll~~aGf~~~~~~~ 95 (107)
.++++||+..+...
T Consensus 188 ~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 188 AITTLGGELENIHS 201 (240)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHcCCeEeEEEE
Confidence 88999999877654
No 133
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.93 E-value=0.0073 Score=42.33 Aligned_cols=90 Identities=13% Similarity=0.204 Sum_probs=56.5
Q ss_pred ceeEEEecccccCCChH------------------------------------HHHHHHHHHHhhCCCCCEEEEEeeeCC
Q 042267 2 QVYLSILQWMLHNFDDE------------------------------------NCIKILRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~------------------------------------~~~~iL~~~~~aL~pgg~l~i~e~~~~ 45 (107)
.+|+++.+..||-.++. +-..+|+..++.|+|||++++.-...+
T Consensus 150 S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 150 TIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp CEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECC
T ss_pred ceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 57999999999976621 345579999999999999988765443
Q ss_pred CCCCCchhhhhhhhh-cHH-----HHhhCCCc--------------eecCHHHHHHHHH-HcCCCceEEE
Q 042267 46 EVPDSTEASRDSFIL-DAI-----FLIQIPHG--------------RERTKKEFTALAI-EAGFKGINFE 94 (107)
Q Consensus 46 ~~~~~~~~~~~~~~~-~~~-----~~~~~~~g--------------~~rt~~e~~~ll~-~aGf~~~~~~ 94 (107)
+. .+.........+ +.. -++ . .| ..+|.+|++++++ +.||++.++.
T Consensus 230 ~~-~~~~~~~~~~~~~~~l~~al~~l~-~-eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le 296 (374)
T 3b5i_A 230 SV-DPTDQGGAGLLFGTHFQDAWDDLV-R-EGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLV 296 (374)
T ss_dssp CS-STTCCHHHHHHHSSHHHHHHHHTT-S-SSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred CC-ccccccchhhHHHHHHHHHHHHHH-H-hCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEE
Confidence 32 110000000111 110 011 1 11 2389999999998 5899987764
No 134
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.89 E-value=0.0012 Score=44.04 Aligned_cols=37 Identities=22% Similarity=0.201 Sum_probs=32.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCC---C--CCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALP---N--DGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~---p--gg~l~i~ 40 (107)
.||+|++++++|+.++ ...+++.+++.|+ | ||+++++
T Consensus 163 ~fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 163 RFQVVLLADLLSFHQA--HDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp SBSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CCCEEEEeCcccChHH--HHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 5899999999988666 5789999999999 9 9998774
No 135
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.79 E-value=0.0012 Score=41.00 Aligned_cols=42 Identities=10% Similarity=0.173 Sum_probs=28.9
Q ss_pred ceeEEEec-ccccCC------ChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQ-WMLHNF------DDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~-~vlh~~------~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||++++. ..++.- ..++...+++++++.|+|||++++..+.
T Consensus 89 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 89 PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp CEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 48999876 333320 2245678899999999999999997653
No 136
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.75 E-value=0.00083 Score=43.93 Aligned_cols=66 Identities=21% Similarity=0.278 Sum_probs=39.4
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeCCCCCCCch-hhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEEEE
Q 042267 21 IKILRNCYKALPNDGKVLVINSTLPEVPDSTE-ASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFEC 95 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 95 (107)
.++|+++++.|+|||++++.- .|....... ..+.....+-. ....+.+++.++++++||++..+..
T Consensus 117 ~~~l~~i~rvLkpgG~lv~~~--~p~~e~~~~~~~~~G~~~d~~-------~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAALI--KPQFEAGREQVGKNGIIRDPK-------VHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEEEE--CHHHHSCHHHHC-CCCCCCHH-------HHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEEE--CcccccCHHHhCcCCeecCcc-------hhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 579999999999999998852 111110000 00000000100 1124678999999999999887754
No 137
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.72 E-value=0.0012 Score=46.25 Aligned_cols=40 Identities=8% Similarity=0.044 Sum_probs=34.7
Q ss_pred ceeEEEecccccC---CChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHN---FDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++...+|. ...+...++++++++.|+|||+++++-
T Consensus 298 ~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 298 RFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 6899999999987 445667899999999999999999864
No 138
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.68 E-value=0.0061 Score=37.93 Aligned_cols=42 Identities=14% Similarity=-0.070 Sum_probs=33.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHh--hCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYK--ALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~--aL~pgg~l~i~e~~~ 44 (107)
.||+|++...+|.. .++..++++++.+ .|+|||.+++.....
T Consensus 113 ~fD~i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 113 PVDLVLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CCSEEEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CccEEEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 58999998776654 3457899999999 999999998866543
No 139
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.63 E-value=0.00066 Score=46.78 Aligned_cols=39 Identities=21% Similarity=0.116 Sum_probs=34.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|+...++|++..+.....+.++++.|+|||++++.
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 589999999999998777788899999999999999854
No 140
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=96.60 E-value=0.00083 Score=47.72 Aligned_cols=40 Identities=8% Similarity=-0.036 Sum_probs=32.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|+.. ..|.+++ ..+.|+++++.|+|||.+++.|...
T Consensus 288 sFDlVisd-gsH~~~d--~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 288 PFDIVIDD-GSHINAH--VRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp CEEEEEEC-SCCCHHH--HHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred CccEEEEC-Ccccchh--HHHHHHHHHHhcCCCeEEEEEeccc
Confidence 58999865 5577654 5789999999999999999988763
No 141
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.59 E-value=0.0053 Score=41.37 Aligned_cols=69 Identities=9% Similarity=0.007 Sum_probs=50.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee--eCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS--TLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEF 79 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~ 79 (107)
.||++++.-++|+.++++....+ ++.++|+|+|.++..+. +...++. ++- .-.+.|
T Consensus 198 ~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~g----------m~~-----------~Y~~~~ 255 (281)
T 3lcv_B 198 PADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKG----------MFQ-----------NYSQSF 255 (281)
T ss_dssp CCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------C----------HHH-----------HHHHHH
T ss_pred CcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcc----------hhh-----------HHHHHH
Confidence 68999999999999998877788 99999999999988886 3222211 111 114688
Q ss_pred HHHHHHcCCCceE
Q 042267 80 TALAIEAGFKGIN 92 (107)
Q Consensus 80 ~~ll~~aGf~~~~ 92 (107)
++.+.+.|....+
T Consensus 256 e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 256 ESQARERSCRIQR 268 (281)
T ss_dssp HHHHHHHTCCEEE
T ss_pred HHHHHhcCCceee
Confidence 9999988974443
No 142
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.57 E-value=1.8e-05 Score=51.91 Aligned_cols=86 Identities=3% Similarity=-0.067 Sum_probs=47.3
Q ss_pred ceeEEEecccccCCCh-------------HHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhC
Q 042267 2 QVYLSILQWMLHNFDD-------------ENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQI 68 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-------------~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (107)
.||+|++.-.+|...+ +....+++++++.|+|||.+.+++.+..... .. ........ .
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~------~~--l~~~g~~~-~ 210 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSL------QL--KKRLRWYS-C 210 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHH------HH--GGGBSCEE-E
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHH------hc--ccceEEEE-E
Confidence 5899998866654431 1123578899999999999988765432110 00 00000000 1
Q ss_pred CCceecCHHHHHHHHHHcCCCceEEEEc
Q 042267 69 PHGRERTKKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 69 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 96 (107)
..+...+.+++.++++++||+.+++...
T Consensus 211 ~~~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 211 MLGKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp EESSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCChhHHHHHHHHHHHcCCCceEEEEE
Confidence 1233345588999999999999887655
No 143
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.57 E-value=0.0069 Score=38.59 Aligned_cols=38 Identities=8% Similarity=-0.085 Sum_probs=28.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++... .+....+++++.+.|+|||.+++-+...
T Consensus 133 ~fD~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 133 PFDFIFIDAD-----KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp CCSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred CcCEEEEcCC-----cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 3888876533 3346789999999999999887766544
No 144
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.48 E-value=0.011 Score=40.97 Aligned_cols=40 Identities=8% Similarity=-0.246 Sum_probs=32.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++...+|... ...++++++++|+|||++++++...
T Consensus 241 ~fD~Vi~~~p~~~~~---~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 241 KFDTFITDPPETLEA---IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CBSEEEECCCSSHHH---HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred CccEEEECCCCchHH---HHHHHHHHHHHcccCCeEEEEEEec
Confidence 589999987766542 4899999999999999877776553
No 145
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.47 E-value=0.0099 Score=40.98 Aligned_cols=84 Identities=8% Similarity=0.059 Sum_probs=56.3
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHH-H-hhCCC-ceecCHHHH
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIF-L-IQIPH-GRERTKKEF 79 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-g~~rt~~e~ 79 (107)
..++++-.+|+.++.+++.++++.+.+.. |+|.+++.|.+.+..+..+....+ ...+.- . ....+ ..-.+.++.
T Consensus 195 Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m--~~~l~~~rg~~l~~~~~y~s~~~~ 271 (334)
T 1rjd_A 195 PTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIM--QSNLKESRNLEMPTLMTYNSKEKY 271 (334)
T ss_dssp CEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHH--HHHHHHHHCCCCTTTTTTCSHHHH
T ss_pred CEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHH--HHHhhcccCCcccccccCCCHHHH
Confidence 35788889999999999999999999987 788888899987733322211111 011110 0 00111 133588999
Q ss_pred HHHHHHcCCC
Q 042267 80 TALAIEAGFK 89 (107)
Q Consensus 80 ~~ll~~aGf~ 89 (107)
.+.|.++||+
T Consensus 272 ~~rl~~~Gf~ 281 (334)
T 1rjd_A 272 ASRWSAAPNV 281 (334)
T ss_dssp HGGGTTSSEE
T ss_pred HHHHHHCCCC
Confidence 9999999997
No 146
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.42 E-value=0.011 Score=38.55 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=30.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 45 (107)
.||+|++... .+....+++++.+.|+|||.+++-+....
T Consensus 136 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 136 QFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp CEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred CEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 5899987543 34467799999999999999988776544
No 147
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.39 E-value=0.0018 Score=45.23 Aligned_cols=40 Identities=10% Similarity=0.277 Sum_probs=31.7
Q ss_pred ceeEEEecccccC---CChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHN---FDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~---~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++...+|. .++....++++++++.|+|||+++++.
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 5899999998885 445556789999999999999999964
No 148
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.39 E-value=0.0026 Score=41.92 Aligned_cols=62 Identities=5% Similarity=-0.096 Sum_probs=43.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|+...+ .+ ...+++.+.+.|+|||++++.... ... . ...++.+
T Consensus 151 ~fD~I~s~a~----~~--~~~ll~~~~~~LkpgG~l~~~~g~---~~~-~-----------------------e~~~~~~ 197 (249)
T 3g89_A 151 AYARAVARAV----AP--LCVLSELLLPFLEVGGAAVAMKGP---RVE-E-----------------------ELAPLPP 197 (249)
T ss_dssp CEEEEEEESS----CC--HHHHHHHHGGGEEEEEEEEEEECS---CCH-H-----------------------HHTTHHH
T ss_pred CceEEEECCc----CC--HHHHHHHHHHHcCCCeEEEEEeCC---CcH-H-----------------------HHHHHHH
Confidence 5899998654 22 368999999999999999875521 110 0 0235667
Q ss_pred HHHHcCCCceEEEEc
Q 042267 82 LAIEAGFKGINFECN 96 (107)
Q Consensus 82 ll~~aGf~~~~~~~~ 96 (107)
.+++.||+..++.+.
T Consensus 198 ~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 198 ALERLGGRLGEVLAL 212 (249)
T ss_dssp HHHHHTEEEEEEEEE
T ss_pred HHHHcCCeEEEEEEe
Confidence 777889998887654
No 149
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.34 E-value=0.0055 Score=41.71 Aligned_cols=35 Identities=6% Similarity=0.181 Sum_probs=29.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+.... .++ ..++++++++.|+|||++++.+
T Consensus 188 ~FDvV~~~a~---~~d--~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 188 EFDVLMVAAL---AEP--KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CCSEEEECTT---CSC--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CcCEEEECCC---ccC--HHHHHHHHHHHcCCCcEEEEEc
Confidence 5899997654 233 5799999999999999999876
No 150
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.29 E-value=0.0098 Score=38.44 Aligned_cols=38 Identities=21% Similarity=0.105 Sum_probs=29.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++... .+....+++++.+.|+|||++++.+...
T Consensus 147 ~fD~I~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 147 SIDLFFLDAD-----KENYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp CEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CcCEEEEeCC-----HHHHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 4899987643 3345688999999999999999876544
No 151
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.28 E-value=0.0022 Score=41.04 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=30.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|++....|.+.+ ..++++.+ +.|+|||.+++.+..
T Consensus 134 ~fD~V~~d~~~~~~~~--~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 134 TLDMVFLDHWKDRYLP--DTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCSEEEECSCGGGHHH--HHHHHHHT-TCCCTTCEEEESCCC
T ss_pred ceEEEEEcCCcccchH--HHHHHHhc-cccCCCeEEEEeCCC
Confidence 5899998887777654 35788888 999999999776544
No 152
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.23 E-value=0.0071 Score=39.53 Aligned_cols=38 Identities=16% Similarity=0.028 Sum_probs=29.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++.. +.+....+++++.+.|+|||.+++.+...
T Consensus 136 ~fD~V~~d~-----~~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 136 AFDLIFIDA-----DKPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp CCSEEEECS-----CGGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred CeEEEEECC-----chHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 589988743 34446789999999999999888766543
No 153
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.21 E-value=0.0025 Score=40.24 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=28.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++...+|++++ ++++.|+|||++++.-.
T Consensus 143 ~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 143 PFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp CEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEEC
T ss_pred CccEEEEccchhhhhH--------HHHHhcccCcEEEEEEc
Confidence 5899999999999987 47889999999988643
No 154
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.18 E-value=0.0029 Score=40.12 Aligned_cols=32 Identities=13% Similarity=0.017 Sum_probs=28.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+...++|++++ ++.+.|+|||++++.-
T Consensus 146 ~fD~v~~~~~~~~~~~--------~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIPE--------PLIRQLKDGGKLLMPV 177 (215)
T ss_dssp CEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred CeeEEEECCchHHHHH--------HHHHHcCCCcEEEEEE
Confidence 5899999999998874 7889999999999865
No 155
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.16 E-value=0.0024 Score=41.57 Aligned_cols=58 Identities=16% Similarity=0.084 Sum_probs=42.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||++++ +.++. ..+++++.+.|+|||++++..+... ..+++.+
T Consensus 162 ~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~ 205 (255)
T 3mb5_A 162 NVDHVIL-----DLPQP--ERVVEHAAKALKPGGFFVAYTPCSN-----------------------------QVMRLHE 205 (255)
T ss_dssp SEEEEEE-----CSSCG--GGGHHHHHHHEEEEEEEEEEESSHH-----------------------------HHHHHHH
T ss_pred CcCEEEE-----CCCCH--HHHHHHHHHHcCCCCEEEEEECCHH-----------------------------HHHHHHH
Confidence 4788876 45553 5789999999999999998642110 1356778
Q ss_pred HHHHcC--CCceEEEE
Q 042267 82 LAIEAG--FKGINFEC 95 (107)
Q Consensus 82 ll~~aG--f~~~~~~~ 95 (107)
+++++| |..+++..
T Consensus 206 ~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 206 KLREFKDYFMKPRTIN 221 (255)
T ss_dssp HHHHTGGGBSCCEEEC
T ss_pred HHHHcCCCccccEEEE
Confidence 888888 88877653
No 156
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.16 E-value=0.0024 Score=39.78 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=29.6
Q ss_pred ceeEEEecccccC----CChHH-----HHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHN----FDDEN-----CIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~----~~d~~-----~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|+....+|. ..|.. ...+++++++.|+|||++++...
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 5899998654442 12221 15889999999999999998764
No 157
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.13 E-value=0.018 Score=38.36 Aligned_cols=62 Identities=6% Similarity=0.084 Sum_probs=43.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||++++... . ....+++++.+.|+|||.+++.+........ ....+++.+
T Consensus 192 ~fD~Vi~~~p-----~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-----------------------~~~~~~i~~ 242 (278)
T 2frn_A 192 IADRILMGYV-----V-RTHEFIPKALSIAKDGAIIHYHNTVPEKLMP-----------------------REPFETFKR 242 (278)
T ss_dssp CEEEEEECCC-----S-SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT-----------------------TTTHHHHHH
T ss_pred CccEEEECCc-----h-hHHHHHHHHHHHCCCCeEEEEEEeecccccc-----------------------ccHHHHHHH
Confidence 5898887432 1 2367899999999999999998865321100 023567889
Q ss_pred HHHHcCCCceE
Q 042267 82 LAIEAGFKGIN 92 (107)
Q Consensus 82 ll~~aGf~~~~ 92 (107)
.++++||+...
T Consensus 243 ~~~~~G~~~~~ 253 (278)
T 2frn_A 243 ITKEYGYDVEK 253 (278)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCeeEE
Confidence 99999998765
No 158
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.09 E-value=0.0013 Score=47.50 Aligned_cols=38 Identities=21% Similarity=0.124 Sum_probs=33.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
.||+|+...++|++.+++....+.++++.|+|||.+++
T Consensus 224 ~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 224 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 58999998888888877788889999999999999984
No 159
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.08 E-value=0.0078 Score=37.59 Aligned_cols=40 Identities=10% Similarity=0.062 Sum_probs=29.6
Q ss_pred ceeEEEecccccCCC----hHH-----HHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFD----DEN-----CIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~----d~~-----~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+....+|... |.. ..++++++++.|+|||++++..
T Consensus 106 ~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 106 KIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 589999887776532 211 1358999999999999998743
No 160
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=96.06 E-value=0.0038 Score=39.96 Aligned_cols=33 Identities=9% Similarity=0.005 Sum_probs=28.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++..++|++++ ++.+.|+|||++++...
T Consensus 134 ~fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 134 PYDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred CccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEc
Confidence 5899999999999875 47889999999999754
No 161
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=95.97 E-value=0.0098 Score=40.27 Aligned_cols=40 Identities=13% Similarity=-0.052 Sum_probs=27.9
Q ss_pred ceeEEEecccccC-----CC----hHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHN-----FD----DENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~-----~~----d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+.....+. .+ .+....+++.+++.|+|||++++..
T Consensus 123 ~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 123 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp CEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5899997532111 01 1225689999999999999999854
No 162
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.93 E-value=0.092 Score=36.59 Aligned_cols=92 Identities=10% Similarity=-0.018 Sum_probs=52.8
Q ss_pred ceeEEEecccccCCCh-------------------------------HHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCC
Q 042267 2 QVYLSILQWMLHNFDD-------------------------------ENCIKILRNCYKALPNDGKVLVINSTLPEVPDS 50 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-------------------------------~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~ 50 (107)
.+|+++.+..||=.++ .|-..+|+..++.|+|||++++.=...++....
T Consensus 139 S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~ 218 (359)
T 1m6e_X 139 TLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRA 218 (359)
T ss_dssp CBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSS
T ss_pred ceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCcc
Confidence 4788999999985443 123456999999999999998865544332100
Q ss_pred ch-----hhhhh-hhhcHHHHhh---------CCCceecCHHHHHHHHHHcC-CCceEE
Q 042267 51 TE-----ASRDS-FILDAIFLIQ---------IPHGRERTKKEFTALAIEAG-FKGINF 93 (107)
Q Consensus 51 ~~-----~~~~~-~~~~~~~~~~---------~~~g~~rt~~e~~~ll~~aG-f~~~~~ 93 (107)
.. ..... .+.++..-.. ..--..++.+|++++++++| |++.+.
T Consensus 219 ~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 219 STECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp STTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred ccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 00 00000 1111110000 00113478899999999985 476654
No 163
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=95.91 E-value=0.0041 Score=40.03 Aligned_cols=38 Identities=8% Similarity=0.003 Sum_probs=30.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++....+ +...+++++.+.|+|||++++.+...
T Consensus 126 ~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 126 LFDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp CEEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred CccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 589999876654 35789999999999999998876443
No 164
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=95.78 E-value=0.01 Score=35.83 Aligned_cols=38 Identities=5% Similarity=0.062 Sum_probs=27.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHH--HhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNC--YKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~--~~aL~pgg~l~i~e~~ 43 (107)
.||++++...+| -..+ ++++.+ ++.|+|||.+++....
T Consensus 110 ~~D~i~~~~~~~-~~~~---~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 110 RFTVAFMAPPYA-MDLA---ALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CEEEEEECCCTT-SCTT---HHHHHHHHHTCEEEEEEEEEEEET
T ss_pred ceEEEEECCCCc-hhHH---HHHHHHHhhcccCCCcEEEEEeCC
Confidence 589999998877 2222 344444 4999999999886544
No 165
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.73 E-value=0.047 Score=38.42 Aligned_cols=72 Identities=17% Similarity=0.083 Sum_probs=39.3
Q ss_pred HHHHHHhhCCCCCEEEEEeeeCCCCC-CCchhhhhh-hhhcHHHHh---------hCCCceecCHHHHHHHHHHcC-CCc
Q 042267 23 ILRNCYKALPNDGKVLVINSTLPEVP-DSTEASRDS-FILDAIFLI---------QIPHGRERTKKEFTALAIEAG-FKG 90 (107)
Q Consensus 23 iL~~~~~aL~pgg~l~i~e~~~~~~~-~~~~~~~~~-~~~~~~~~~---------~~~~g~~rt~~e~~~ll~~aG-f~~ 90 (107)
+|+..++.|+|||++++.-...+... .+....... .+.++.--. ...--..++.+|++++++++| |++
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i 286 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEI 286 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceE
Confidence 37788999999999988655443320 111000000 111111000 000112488999999999984 787
Q ss_pred eEEE
Q 042267 91 INFE 94 (107)
Q Consensus 91 ~~~~ 94 (107)
.++.
T Consensus 287 ~~le 290 (384)
T 2efj_A 287 LYLE 290 (384)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 166
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=95.63 E-value=0.0072 Score=40.48 Aligned_cols=39 Identities=15% Similarity=0.060 Sum_probs=29.0
Q ss_pred ceeEEEecccccCCChHHH--HHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENC--IKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|++....+..+.+.. .+++++++++|+|||.+++.
T Consensus 151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 151 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp CEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 5899998554433233222 68999999999999999875
No 167
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.59 E-value=0.0086 Score=38.13 Aligned_cols=39 Identities=23% Similarity=0.124 Sum_probs=30.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 45 (107)
.||+|++.. +.+....+++++.+.|+|||.+++.+...+
T Consensus 140 ~fD~v~~~~-----~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 140 QYDLIYIDA-----DKANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp CEEEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred CccEEEECC-----CHHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 589988433 344467899999999999999998776543
No 168
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=95.59 E-value=0.034 Score=38.34 Aligned_cols=84 Identities=8% Similarity=-0.011 Sum_probs=55.1
Q ss_pred EEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHh--h-CCCc-eecCHHHHH
Q 042267 5 LSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLI--Q-IPHG-RERTKKEFT 80 (107)
Q Consensus 5 ~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~g-~~rt~~e~~ 80 (107)
++++-.++..++.+++.++|+.+.+..++ |.+++.|++.+.+ + +...+--+.-. . ..+- .-.+.++..
T Consensus 194 l~iaEGvL~YL~~~~~~~ll~~ia~~f~~-~~~i~yE~i~p~d---~----fg~~M~~~l~~~g~pl~sl~~y~t~~~~~ 265 (334)
T 3iei_A 194 LLIAECVLVYMTPEQSANLLKWAANSFER-AMFINYEQVNMGD---R----FGQIMIENLRRRQCDLAGVETCKSLESQK 265 (334)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHCSS-EEEEEEEECCTTS---H----HHHHHHHHHHTTTCCCTTGGGGGCHHHHH
T ss_pred EEEEchhhhCCCHHHHHHHHHHHHHhCCC-ceEEEEeccCCCC---H----HHHHHHHHHHHhCCCCcccccCCCHHHHH
Confidence 67777899999999999999999987754 5666779885532 1 11111001100 0 0011 235778889
Q ss_pred HHHHHcCCCceEEEEc
Q 042267 81 ALAIEAGFKGINFECN 96 (107)
Q Consensus 81 ~ll~~aGf~~~~~~~~ 96 (107)
+.|.++||+.+++.+.
T Consensus 266 ~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 266 ERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHHTTTCSEEEEEEH
T ss_pred HHHHHcCCCcceeecH
Confidence 9999999998776654
No 169
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.57 E-value=0.0073 Score=38.97 Aligned_cols=32 Identities=13% Similarity=0.079 Sum_probs=27.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+....+|++++ ++.+.|+|||++++.-
T Consensus 158 ~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred CccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEE
Confidence 4899999999998875 5788999999998854
No 170
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.49 E-value=0.018 Score=36.54 Aligned_cols=56 Identities=11% Similarity=0.030 Sum_probs=40.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||++++...+ + .. +++++.+.|+|||++++..... .+..++.+
T Consensus 122 ~~D~v~~~~~~----~--~~-~l~~~~~~LkpgG~lv~~~~~~-----------------------------~~~~~~~~ 165 (204)
T 3njr_A 122 LPEAVFIGGGG----S--QA-LYDRLWEWLAPGTRIVANAVTL-----------------------------ESETLLTQ 165 (204)
T ss_dssp CCSEEEECSCC----C--HH-HHHHHHHHSCTTCEEEEEECSH-----------------------------HHHHHHHH
T ss_pred CCCEEEECCcc----c--HH-HHHHHHHhcCCCcEEEEEecCc-----------------------------ccHHHHHH
Confidence 58999877643 2 24 9999999999999998754211 02357778
Q ss_pred HHHHcCCCceEE
Q 042267 82 LAIEAGFKGINF 93 (107)
Q Consensus 82 ll~~aGf~~~~~ 93 (107)
++++.||++.++
T Consensus 166 ~l~~~g~~i~~i 177 (204)
T 3njr_A 166 LHARHGGQLLRI 177 (204)
T ss_dssp HHHHHCSEEEEE
T ss_pred HHHhCCCcEEEE
Confidence 888889887665
No 171
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=95.36 E-value=0.0095 Score=40.35 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=28.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+...++|+.+ +++.+.|+|||++++..
T Consensus 144 ~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 144 PYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEB
T ss_pred CeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEE
Confidence 589999999999887 46788999999999974
No 172
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=95.30 E-value=0.0085 Score=39.50 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=27.8
Q ss_pred ceeEEEeccccc----------------CCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLH----------------NFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh----------------~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++.--++ +........+++.+.+.|+|||+++++-
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 489999873322 2222336789999999999999998853
No 173
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.22 E-value=0.011 Score=39.57 Aligned_cols=40 Identities=18% Similarity=0.039 Sum_probs=27.8
Q ss_pred ceeEEEecccccCCChHH--HHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDEN--CIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++....|..+... ..++++++++.|+|||.+++..
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 589999865543322222 2688999999999999998863
No 174
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=95.18 E-value=0.012 Score=37.22 Aligned_cols=37 Identities=14% Similarity=0.251 Sum_probs=28.0
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
||++++.. +......+++++++.|+|||.+++.+...
T Consensus 127 fD~v~~~~-----~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 127 IDILFMDC-----DVFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp EEEEEEET-----TTSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred CCEEEEcC-----ChhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 78887652 22335789999999999999998766544
No 175
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=95.17 E-value=0.019 Score=37.36 Aligned_cols=36 Identities=14% Similarity=0.181 Sum_probs=28.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHh-hCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYK-ALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~-aL~pgg~l~i~e~ 42 (107)
.||+|++... |. +...+|+++.+ .|+|||++++.+.
T Consensus 152 ~fD~I~~d~~-~~----~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 152 AHPLIFIDNA-HA----NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSSEEEEESS-CS----SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCCEEEECCc-hH----hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 4899887654 53 35679999997 9999999998765
No 176
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.15 E-value=0.012 Score=39.73 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=25.8
Q ss_pred ceeEEEecccccCCChHHH--HHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENC--IKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+....-+.-+.... ..++++++++|+|||.+++.-
T Consensus 157 ~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 157 TFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 5899988544333222221 689999999999999998854
No 177
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=95.14 E-value=0.014 Score=40.08 Aligned_cols=41 Identities=12% Similarity=0.209 Sum_probs=29.9
Q ss_pred ceeEEEecccccCCChHH--HHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDEN--CIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|+.....|...... ...+++++++.|+|||.+++.-.
T Consensus 159 ~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 159 SRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 589999865544332221 26899999999999999987653
No 178
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.07 E-value=0.014 Score=37.27 Aligned_cols=38 Identities=21% Similarity=0.413 Sum_probs=29.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||++++.. +......+++++.+.|+|||.+++.+...
T Consensus 145 ~~D~v~~d~-----~~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 145 TFDVAVVDA-----DKENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp CEEEEEECS-----CSTTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred CccEEEECC-----CHHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 489988743 23345789999999999999998876543
No 179
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=95.05 E-value=0.028 Score=34.47 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=27.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHH--HhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNC--YKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~--~~aL~pgg~l~i~e~~ 43 (107)
.||++++...+|....+ ..++.+ .+.|+|||.+++....
T Consensus 116 ~fD~i~~~~~~~~~~~~---~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 116 QFDLVLLDPPYAKQEIV---SQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CEEEEEECCCGGGCCHH---HHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCEEEECCCCCchhHH---HHHHHHHHhcccCCCCEEEEEeCC
Confidence 58999998876644433 445555 7889999999886544
No 180
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=95.04 E-value=0.014 Score=37.41 Aligned_cols=32 Identities=9% Similarity=0.028 Sum_probs=27.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+....+|+.. +++.+.|+|||++++.-
T Consensus 163 ~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 163 PYNAIHVGAAAPDTP--------TELINQLASGGRLIVPV 194 (227)
T ss_dssp SEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCchHHHH--------HHHHHHhcCCCEEEEEE
Confidence 589999999998766 57889999999998853
No 181
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=95.01 E-value=0.0085 Score=41.71 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=33.1
Q ss_pred ceeEEEecccccCCCh-HHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDD-ENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|++..+.|.... +....+++.+++.|+|||.+++.+..
T Consensus 129 ~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 129 KVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp CEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred cceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 5899999776666643 33678999999999999999776554
No 182
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=94.98 E-value=0.025 Score=38.41 Aligned_cols=39 Identities=10% Similarity=0.010 Sum_probs=27.2
Q ss_pred ceeEEEeccccc---CCChHH-HHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLH---NFDDEN-CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh---~~~d~~-~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|+.....+ ...|.. ...+|+.+++.|+|||.+++.
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 479999866543 222322 236899999999999988773
No 183
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.97 E-value=0.015 Score=39.54 Aligned_cols=40 Identities=10% Similarity=-0.009 Sum_probs=30.0
Q ss_pred ceeEEEecccccC---CChHH--HHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHN---FDDEN--CIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~---~~d~~--~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++....|. -+.+. ..+++++++++|+|||.+++.-
T Consensus 151 ~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 151 RYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 5899999766554 11111 3689999999999999998864
No 184
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=94.96 E-value=0.011 Score=40.24 Aligned_cols=40 Identities=15% Similarity=-0.059 Sum_probs=24.7
Q ss_pred ceeEEEecccccCCChHHH--HHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENC--IKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++...-|.-++... ..+++++++.|+|||.+++..
T Consensus 181 ~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 181 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 5899997543332222221 689999999999999998754
No 185
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=94.96 E-value=0.011 Score=40.70 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=29.4
Q ss_pred ceeEEEecccccCCC-hHHHHHHHHHHHhhCCCCCEEEE
Q 042267 2 QVYLSILQWMLHNFD-DENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~-d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
.||+|+..++.|... .+....+++.+.+.|+|||.++.
T Consensus 133 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 589999877655442 23367899999999999999863
No 186
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=94.93 E-value=0.03 Score=36.66 Aligned_cols=38 Identities=8% Similarity=0.023 Sum_probs=28.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++... ......+++++.+.|+|||.+++-+...
T Consensus 156 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 156 SYDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp CBSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred CEEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 4899887532 2336789999999999999998765443
No 187
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=94.89 E-value=0.015 Score=36.67 Aligned_cols=38 Identities=13% Similarity=0.089 Sum_probs=29.2
Q ss_pred eeEEEecccccCCChHHHHHHHHHH--HhhCCCCCEEEEEeee
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNC--YKALPNDGKVLVINST 43 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~--~~aL~pgg~l~i~e~~ 43 (107)
||+|++...+| ..+ ..++++.+ .+.|+|||.+++....
T Consensus 126 fD~I~~~~~~~-~~~--~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 126 FDVVFLDPPFH-FNL--AEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EEEEEECCCSS-SCH--HHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CCEEEECCCCC-Ccc--HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 89999988866 333 46788888 5679999999886644
No 188
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=94.81 E-value=0.0084 Score=39.69 Aligned_cols=58 Identities=5% Similarity=-0.020 Sum_probs=41.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||+|++ ++++. .++|+++.+.|+|||++++..+... ..+++.+
T Consensus 179 ~fD~Vi~-----~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~-----------------------------~~~~~~~ 222 (275)
T 1yb2_A 179 MYDAVIA-----DIPDP--WNHVQKIASMMKPGSVATFYLPNFD-----------------------------QSEKTVL 222 (275)
T ss_dssp CEEEEEE-----CCSCG--GGSHHHHHHTEEEEEEEEEEESSHH-----------------------------HHHHHHH
T ss_pred CccEEEE-----cCcCH--HHHHHHHHHHcCCCCEEEEEeCCHH-----------------------------HHHHHHH
Confidence 4899987 44543 5899999999999999999762210 1245566
Q ss_pred HHHHcCCCceEEEE
Q 042267 82 LAIEAGFKGINFEC 95 (107)
Q Consensus 82 ll~~aGf~~~~~~~ 95 (107)
+++++||+.+++..
T Consensus 223 ~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 223 SLSASGMHHLETVE 236 (275)
T ss_dssp HSGGGTEEEEEEEE
T ss_pred HHHHCCCeEEEEEE
Confidence 67778888776653
No 189
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=94.81 E-value=0.0087 Score=38.79 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=27.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++ ++++. ..+++++.+.|+|||++++..
T Consensus 166 ~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 166 AYDGVAL-----DLMEP--WKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp CEEEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEe
Confidence 4898887 34543 488999999999999999976
No 190
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=94.80 E-value=0.024 Score=38.44 Aligned_cols=24 Identities=17% Similarity=0.368 Sum_probs=20.7
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 21 IKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.++|+++.+.|+|||++++.....
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCC
Confidence 589999999999999998876543
No 191
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=94.79 E-value=0.019 Score=37.02 Aligned_cols=38 Identities=13% Similarity=0.162 Sum_probs=28.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++... ......+++++.+.|+|||.+++-+...
T Consensus 129 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 129 SYQLVFGQVS-----PMDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp CEEEEEECCC-----TTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred CcCeEEEcCc-----HHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 5899987542 2335678999999999999998855443
No 192
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=94.76 E-value=0.026 Score=36.56 Aligned_cols=37 Identities=22% Similarity=0.169 Sum_probs=28.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|++. .+......+++++.+.|+|||.+++-+..
T Consensus 147 ~fD~I~~d-----~~~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 147 SYDFGFVD-----ADKPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp CEEEEEEC-----SCGGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CcCEEEEC-----CchHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 48998864 23344688999999999999998775543
No 193
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=94.74 E-value=0.018 Score=37.13 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=29.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||++++... .+....+++++.+.|+|||.+++.+...
T Consensus 148 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 148 EFDLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp CEEEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred CcCEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4898886533 3446789999999999999998876554
No 194
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=94.70 E-value=0.023 Score=37.09 Aligned_cols=34 Identities=9% Similarity=-0.020 Sum_probs=27.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|+...+. ..++++++.|+|||++++..+..
T Consensus 148 ~fD~v~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 148 SMDAIIRIYAP---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp CEEEEEEESCC---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ceeEEEEeCCh---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 58999976552 35899999999999999987653
No 195
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.62 E-value=0.2 Score=37.49 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=56.4
Q ss_pred EEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCC--ceecCHHHHHHH
Q 042267 5 LSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPH--GRERTKKEFTAL 82 (107)
Q Consensus 5 ~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~rt~~e~~~l 82 (107)
++++-.+|..++.+++.++|+.+.+ + |+|.+++.|.+.+..+..+. .+. ....+......-. ....+.++..+.
T Consensus 220 l~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d~f-~~~-m~~~~~~~g~~l~~~~~~~~~~~~~~~ 295 (695)
T 2zwa_A 220 VFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFEPF-SKQ-MLAHFKRNDSPLQSVLKYNTIESQVQR 295 (695)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTSHH-HHH-HHHHHHHTTCCCCGGGTCCSHHHHHHH
T ss_pred EEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCChH-HHH-HHHHHHHcCCCCCccccCCCHHHHHHH
Confidence 5677778999999999999999985 5 68888888988775443321 110 0011110000001 123578999999
Q ss_pred HHHcCCCceEEEE
Q 042267 83 AIEAGFKGINFEC 95 (107)
Q Consensus 83 l~~aGf~~~~~~~ 95 (107)
|.++||+.+....
T Consensus 296 ~~~~Gw~~v~~~~ 308 (695)
T 2zwa_A 296 FNKLGFAYVNVGD 308 (695)
T ss_dssp HHHTTCCEEEEEE
T ss_pred HHHCCCCCcceee
Confidence 9999998766543
No 196
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=94.60 E-value=0.012 Score=37.97 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=28.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++.. +.+....+++++.+.|+|||.+++-+...
T Consensus 142 ~fD~V~~~~-----~~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 142 VYDMIFIDA-----AKAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp CEEEEEEET-----TSSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred CccEEEEcC-----cHHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 589998543 23335789999999999999997755443
No 197
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=94.59 E-value=0.025 Score=38.83 Aligned_cols=37 Identities=24% Similarity=0.228 Sum_probs=27.8
Q ss_pred ceeEEEecccccCCC-hHHHHHHHHHHHhhCCCCCEEE
Q 042267 2 QVYLSILQWMLHNFD-DENCIKILRNCYKALPNDGKVL 38 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~-d~~~~~iL~~~~~aL~pgg~l~ 38 (107)
.||+|+...+.+.+. ......+|+++++.|+|||+++
T Consensus 131 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 131 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 589999877433222 2335789999999999999987
No 198
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=94.58 E-value=0.013 Score=36.73 Aligned_cols=33 Identities=9% Similarity=0.092 Sum_probs=26.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|++..+ .+ ...+++++++.|+|||.+++.
T Consensus 132 ~~D~i~~~~~----~~--~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 132 PFDGVISRAF----AS--LNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CEEEEECSCS----SS--HHHHHHHHTTSEEEEEEEEEE
T ss_pred CcCEEEEecc----CC--HHHHHHHHHHhcCCCcEEEEE
Confidence 5899986442 22 468999999999999999886
No 199
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=94.57 E-value=0.032 Score=39.73 Aligned_cols=44 Identities=9% Similarity=0.113 Sum_probs=32.7
Q ss_pred ceeEEEe------cccccCCChH-------HH-------HHHHHHHHhhCCCCCEEEEEeeeCC
Q 042267 2 QVYLSIL------QWMLHNFDDE-------NC-------IKILRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 2 ~~D~v~~------~~vlh~~~d~-------~~-------~~iL~~~~~aL~pgg~l~i~e~~~~ 45 (107)
.||+|++ ..+++..+|. +. .++|+++.+.|+|||++++......
T Consensus 330 ~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 330 VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 4899996 4466655542 11 6789999999999999999886543
No 200
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=94.51 E-value=0.017 Score=35.29 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=27.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHH--hhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCY--KALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~--~aL~pgg~l~i~e~~ 43 (107)
.||++++...+|. .....+++.+. +.|+|||.+++....
T Consensus 100 ~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 100 RFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp CEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 4899998766543 22345566665 899999999886644
No 201
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.48 E-value=0.34 Score=31.49 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=47.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+||+++..++ ..+-...+|..+.+.|+|+|++++ .+.. .....++
T Consensus 84 ~~D~IviaG~----Gg~~i~~Il~~~~~~L~~~~~lVl-q~~~------------------------------~~~~vr~ 128 (225)
T 3kr9_A 84 QVSVITIAGM----GGRLIARILEEGLGKLANVERLIL-QPNN------------------------------REDDLRI 128 (225)
T ss_dssp CCCEEEEEEE----CHHHHHHHHHHTGGGCTTCCEEEE-EESS------------------------------CHHHHHH
T ss_pred CCCEEEEcCC----ChHHHHHHHHHHHHHhCCCCEEEE-ECCC------------------------------CHHHHHH
Confidence 3788887655 334468999999999999999766 3331 1356788
Q ss_pred HHHHcCCCceEEEEc---CCceeEEEE
Q 042267 82 LAIEAGFKGINFECN---VCNSYVMEF 105 (107)
Q Consensus 82 ll~~aGf~~~~~~~~---~~~~~vi~~ 105 (107)
||.+.||.+.+..-+ +-+..++.+
T Consensus 129 ~L~~~Gf~i~~e~lv~e~~~~Yeii~~ 155 (225)
T 3kr9_A 129 WLQDHGFQIVAESILEEAGKFYEILVV 155 (225)
T ss_dssp HHHHTTEEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHCCCEEEEEEEEEECCEEEEEEEE
Confidence 999999998876432 334555554
No 202
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.45 E-value=0.053 Score=34.29 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=27.2
Q ss_pred ceeEEEecccccCCChH------HHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDE------NCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~------~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.+|+|++....+..... ....+++++++.|+|||.+++.
T Consensus 111 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 111 EIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp CCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 47888877543221110 1257999999999999999884
No 203
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=94.40 E-value=0.047 Score=36.15 Aligned_cols=25 Identities=12% Similarity=0.243 Sum_probs=21.4
Q ss_pred HHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 20 CIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
..++|+++.+.|+|||++++.....
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCC
Confidence 3789999999999999998876544
No 204
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=94.39 E-value=0.021 Score=38.88 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=29.2
Q ss_pred ceeEEEecccccCCC-hHHHHHHHHHHHhhCCCCCEEEE
Q 042267 2 QVYLSILQWMLHNFD-DENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~-d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
.+|+|+...+.+.+. .+....+++.+.+.|+|||+++.
T Consensus 105 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 589999886655443 23356899999999999999973
No 205
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=94.36 E-value=0.027 Score=35.87 Aligned_cols=33 Identities=9% Similarity=-0.002 Sum_probs=27.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|+....+|+. ++++.+.|+|||++++.-.
T Consensus 162 ~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 162 LFDAIHVGASASEL--------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp CEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEE
T ss_pred CcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEc
Confidence 58999999998865 4678899999999988643
No 206
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=94.26 E-value=0.029 Score=38.26 Aligned_cols=39 Identities=15% Similarity=0.060 Sum_probs=27.6
Q ss_pred ceeEEEecccccCCChHHH--HHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENC--IKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~--~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|++...-+.-+.+.. .++++++++.|+|||.+++.
T Consensus 189 ~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 189 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp CEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 5899997543221112221 68999999999999999875
No 207
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=94.24 E-value=0.021 Score=38.68 Aligned_cols=40 Identities=15% Similarity=-0.100 Sum_probs=26.1
Q ss_pred ceeEEEecccccCCChH--HHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDE--NCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~--~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++....|.-+.. ...++++++++.|+|||.+++..
T Consensus 168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 58999985543322221 13578999999999999998754
No 208
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=94.15 E-value=0.026 Score=36.31 Aligned_cols=34 Identities=12% Similarity=0.076 Sum_probs=26.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
+||+++. +.++ ...+++++.+.|+|||++++..+
T Consensus 158 ~~D~v~~-----~~~~--~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 158 IFHAAFV-----DVRE--PWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp CBSEEEE-----CSSC--GGGGHHHHHHHBCTTCEEEEEES
T ss_pred cccEEEE-----CCcC--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 4788886 3343 35789999999999999999764
No 209
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=94.12 E-value=0.026 Score=38.85 Aligned_cols=39 Identities=13% Similarity=-0.049 Sum_probs=27.7
Q ss_pred ceeEEEecccccCCChHH--HHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDEN--CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|++...-+....+. ...+++++++.|+|||.+++.
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 589999854321111111 368999999999999999875
No 210
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=94.07 E-value=0.017 Score=38.50 Aligned_cols=39 Identities=18% Similarity=0.025 Sum_probs=28.1
Q ss_pred ceeEEEecccccCCChHH--HHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDEN--CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~--~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|++....+..+... ..+++++++++|+|||.+++.
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 589999854433332211 257999999999999999875
No 211
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=93.99 E-value=0.035 Score=35.30 Aligned_cols=32 Identities=6% Similarity=-0.050 Sum_probs=26.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+....+++.. +++++.|+|||++++..
T Consensus 151 ~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 151 PYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPV 182 (226)
T ss_dssp CEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEE
T ss_pred CcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEE
Confidence 589999988887654 57889999999999864
No 212
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=93.98 E-value=0.028 Score=36.08 Aligned_cols=40 Identities=8% Similarity=-0.027 Sum_probs=26.4
Q ss_pred ceeEEEecccccCCChHHH------HHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENC------IKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~------~~iL~~~~~aL~pgg~l~i~e 41 (107)
.+|.+++............ ..+++.+++.|+|||.+++..
T Consensus 105 ~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 105 SLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp CEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 4688877643321111111 259999999999999998864
No 213
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=93.89 E-value=0.08 Score=38.17 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=20.4
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 21 IKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.++|+++.+.|+|||+|++.....
T Consensus 226 ~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 226 RELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhcCCCCEEEEecccC
Confidence 578999999999999999876543
No 214
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=93.79 E-value=0.047 Score=39.32 Aligned_cols=23 Identities=17% Similarity=0.216 Sum_probs=20.1
Q ss_pred HHHHHHHHhhCCCCCEEEEEeee
Q 042267 21 IKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.++|+++.+.|+|||+|+.....
T Consensus 209 ~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 209 KALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESC
T ss_pred HHHHHHHHHhcCCCcEEEEEecc
Confidence 78999999999999999987653
No 215
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=93.76 E-value=0.024 Score=35.68 Aligned_cols=23 Identities=22% Similarity=0.315 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhCCCCCEEEEEee
Q 042267 20 CIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
+..+|+.+.+.|+|||++++.-+
T Consensus 118 ~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 118 GQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHccCCCEEEEEEc
Confidence 46789999999999999987554
No 216
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=93.71 E-value=0.022 Score=37.61 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=26.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++ +.++ ...+++++.+.|+|||++++..
T Consensus 181 ~~D~V~~-----~~~~--~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 181 DVDALFL-----DVPD--PWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp SEEEEEE-----CCSC--GGGTHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEE-----CCcC--HHHHHHHHHHHcCCCCEEEEEe
Confidence 4888887 3444 3588999999999999999876
No 217
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=93.68 E-value=0.075 Score=33.78 Aligned_cols=21 Identities=10% Similarity=0.222 Sum_probs=18.6
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 042267 21 IKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e 41 (107)
..+|+++++.|+|||.+++..
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEe
Confidence 578999999999999998853
No 218
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=93.55 E-value=0.07 Score=37.69 Aligned_cols=43 Identities=16% Similarity=0.243 Sum_probs=31.6
Q ss_pred ceeEEEe------cccccCCChH-------HH-------HHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSIL------QWMLHNFDDE-------NC-------IKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~------~~vlh~~~d~-------~~-------~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++ ..+++..++. +. .++|+++.+.|+|||++++.....
T Consensus 315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 4899986 3455554442 11 588999999999999999987654
No 219
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=93.53 E-value=0.049 Score=37.21 Aligned_cols=40 Identities=10% Similarity=0.162 Sum_probs=31.8
Q ss_pred ceeEEEecccccCCChHHH----------------HHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENC----------------IKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~----------------~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+..--++.++.++. ..+++++.+.|+|||+++++-
T Consensus 201 ~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 201 PVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 5899999887776755432 268999999999999998865
No 220
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=93.45 E-value=0.028 Score=36.94 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=26.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++ +.++. ..+++++.+.|+|||++++..+
T Consensus 171 ~~D~v~~-----~~~~~--~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 171 SVDRAVL-----DMLAP--WEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CEEEEEE-----ESSCG--GGGHHHHHHHEEEEEEEEEEES
T ss_pred ceeEEEE-----CCcCH--HHHHHHHHHhCCCCCEEEEEeC
Confidence 4788887 23332 4789999999999999999764
No 221
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=93.35 E-value=0.14 Score=33.90 Aligned_cols=18 Identities=6% Similarity=0.158 Sum_probs=13.6
Q ss_pred HHHHHHHhhCCCCCEEEE
Q 042267 22 KILRNCYKALPNDGKVLV 39 (107)
Q Consensus 22 ~iL~~~~~aL~pgg~l~i 39 (107)
.+|+.+++.|+|||+++.
T Consensus 194 ~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 194 NLFNAMARLARPGGTLAT 211 (257)
T ss_dssp HHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEE
Confidence 677788888888887763
No 222
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=93.25 E-value=0.069 Score=33.63 Aligned_cols=39 Identities=5% Similarity=-0.040 Sum_probs=28.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhh--CCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKA--LPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~a--L~pgg~l~i~e~~ 43 (107)
.||+|++...+| ..+ ...+++.+.+. |+|||.+++....
T Consensus 122 ~fD~V~~~~p~~-~~~--~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 122 PHNIVFVDPPFR-RGL--LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CEEEEEECCSSS-TTT--HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCEEEECCCCC-CCc--HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 589999887766 333 35677777664 9999999876543
No 223
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=93.20 E-value=0.1 Score=31.58 Aligned_cols=55 Identities=11% Similarity=0.035 Sum_probs=40.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||++++..+ .....+++++++. |||++++...... +..++.+
T Consensus 100 ~~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~~-----------------------------~~~~~~~ 142 (183)
T 2yxd_A 100 EFNKAFIGGT------KNIEKIIEILDKK--KINHIVANTIVLE-----------------------------NAAKIIN 142 (183)
T ss_dssp CCSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEESCHH-----------------------------HHHHHHH
T ss_pred CCcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEecccc-----------------------------cHHHHHH
Confidence 5899999888 2346888998887 9999998763110 1356788
Q ss_pred HHHHcCCCceEE
Q 042267 82 LAIEAGFKGINF 93 (107)
Q Consensus 82 ll~~aGf~~~~~ 93 (107)
+++++||....+
T Consensus 143 ~l~~~g~~~~~~ 154 (183)
T 2yxd_A 143 EFESRGYNVDAV 154 (183)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHcCCeEEEE
Confidence 889999876544
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=93.16 E-value=0.05 Score=36.08 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=25.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|+.. .+|+ ..+++++++.|+|||.+++.
T Consensus 139 ~fD~Ii~d-----~~dp--~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 139 KYDLIFCL-----QEPD--IHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp CEEEEEES-----SCCC--HHHHHHHHTTEEEEEEEEEE
T ss_pred hCCEEEEC-----CCCh--HHHHHHHHHhcCCCcEEEEE
Confidence 58999875 3443 24999999999999999885
No 225
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=93.04 E-value=0.045 Score=36.83 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=25.3
Q ss_pred ceeEEEecccccCCChH---HHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDE---NCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~---~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||+|++...-+..... ...++++++++.|+|||.+++.
T Consensus 163 ~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 163 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 48999974322201111 1268999999999999999884
No 226
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=92.96 E-value=0.1 Score=34.67 Aligned_cols=41 Identities=17% Similarity=0.012 Sum_probs=28.3
Q ss_pred ceeEEEecccccCCCh---HH--HHHHHHHHHhhCCCCC--EEEEEeee
Q 042267 2 QVYLSILQWMLHNFDD---EN--CIKILRNCYKALPNDG--KVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d---~~--~~~iL~~~~~aL~pgg--~l~i~e~~ 43 (107)
.||+|+.... |..++ +. ...+|+.+++.|+||| .+++..+.
T Consensus 140 ~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 140 RTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 5899998765 43322 11 2248999999999999 88875543
No 227
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=92.78 E-value=0.21 Score=33.99 Aligned_cols=83 Identities=4% Similarity=-0.065 Sum_probs=52.2
Q ss_pred EEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhC--------CCcee-cC
Q 042267 5 LSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQI--------PHGRE-RT 75 (107)
Q Consensus 5 ~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~-rt 75 (107)
++++-.++|++++++...+++.+.+.+.||+.|++ |.+.++.+... ........ ..+... .+... ++
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~-d~~~~~~~~~~--~~~~~~~~-~~~~~~g~~~~~~l~~~~~~~~ 257 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAV-ETSPLHGDEWR--EQMQLRFR-RVSDALGFEQAVDVQELIYHDE 257 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEE-ECCCTTCSHHH--HHHHHHHH-HHHC-----------CCTTCCT
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEE-EecCCCCcchh--HHHHHHHH-HHHHHcCCcCCCCccccccCCC
Confidence 67788899999999999999999999999888755 65554321010 00000000 000000 01112 35
Q ss_pred -HHHHHHHHHHcCCCce
Q 042267 76 -KKEFTALAIEAGFKGI 91 (107)
Q Consensus 76 -~~e~~~ll~~aGf~~~ 91 (107)
.++..++|.+.||+.+
T Consensus 258 ~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 258 NRAVVADWLNRHGWRAT 274 (310)
T ss_dssp TCCCHHHHHTTTTEEEE
T ss_pred ChHHHHHHHHHCcCccc
Confidence 7899999999999987
No 228
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=92.71 E-value=0.11 Score=34.65 Aligned_cols=40 Identities=10% Similarity=-0.043 Sum_probs=27.7
Q ss_pred ceeEEEecccccCCCh----HH-HHHHHHHHHhhCCCCC--EEEEEee
Q 042267 2 QVYLSILQWMLHNFDD----EN-CIKILRNCYKALPNDG--KVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d----~~-~~~iL~~~~~aL~pgg--~l~i~e~ 42 (107)
.||+|+.... |..+. .. ..++|+.+++.|+||| .+++..+
T Consensus 148 ~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 148 QADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 5899998766 33222 11 2248999999999999 8877443
No 229
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=92.39 E-value=0.087 Score=34.19 Aligned_cols=21 Identities=24% Similarity=0.213 Sum_probs=18.5
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 042267 21 IKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e 41 (107)
..+|+++++.|+|||.+++.-
T Consensus 148 ~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 148 PTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCCEEEEEe
Confidence 379999999999999998863
No 230
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=92.01 E-value=1.3 Score=28.93 Aligned_cols=70 Identities=9% Similarity=-0.021 Sum_probs=48.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
+||++++.++. .+-...+|....+.|+++|++++.- +. ...++++
T Consensus 90 ~~D~IviaGmG----g~lI~~IL~~~~~~l~~~~~lIlqp-~~------------------------------~~~~lr~ 134 (230)
T 3lec_A 90 NIDTITICGMG----GRLIADILNNDIDKLQHVKTLVLQP-NN------------------------------REDDLRK 134 (230)
T ss_dssp CCCEEEEEEEC----HHHHHHHHHHTGGGGTTCCEEEEEE-SS------------------------------CHHHHHH
T ss_pred ccCEEEEeCCc----hHHHHHHHHHHHHHhCcCCEEEEEC-CC------------------------------ChHHHHH
Confidence 47888876653 3446789999999999998876532 10 1467899
Q ss_pred HHHHcCCCceEEEEc---CCceeEEEEE
Q 042267 82 LAIEAGFKGINFECN---VCNSYVMEFY 106 (107)
Q Consensus 82 ll~~aGf~~~~~~~~---~~~~~vi~~~ 106 (107)
||.+.||.+.+..-+ +-+..++.+.
T Consensus 135 ~L~~~Gf~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 135 WLAANDFEIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp HHHHTTEEEEEEEEEEC--CEEEEEEEE
T ss_pred HHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 999999999876533 3455566553
No 231
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=91.89 E-value=0.0031 Score=40.69 Aligned_cols=36 Identities=11% Similarity=-0.028 Sum_probs=29.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
.||+|++...+|..++.. ..+.++++.|+|||.+++
T Consensus 144 ~~D~v~~~~~~~~~~~~~--~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 144 KADVVFLSPPWGGPDYAT--AETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CCSEEEECCCCSSGGGGG--SSSBCTTTSCSSCHHHHH
T ss_pred CCCEEEECCCcCCcchhh--hHHHHHHhhcCCcceeHH
Confidence 589999999999877753 377789999999999544
No 232
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=91.50 E-value=0.062 Score=35.73 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=34.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||++++.-++|+..+.+....+ ++.++|++++.++-.+
T Consensus 168 ~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 168 AGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp BCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred CcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 68999999999999988767666 8889999998887776
No 233
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=91.48 E-value=0.33 Score=33.23 Aligned_cols=41 Identities=12% Similarity=0.096 Sum_probs=28.3
Q ss_pred ceeEEEeccc---------ccCCChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWM---------LHNFDDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~v---------lh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.||+|++.-- ++++ .++..++++++.+.|+|||.+++....
T Consensus 225 ~fD~Ii~dPP~~~~~~~~~~~~~-~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 225 TYDIILTDPPKFGRGTHGEVWQL-FDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp CBSEEEECCCSEEECTTCCEEEH-HHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred CceEEEECCccccCCchHHHHHH-HHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 5899988321 1111 233678999999999999998775544
No 234
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=91.41 E-value=0.099 Score=35.48 Aligned_cols=34 Identities=18% Similarity=0.059 Sum_probs=25.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++.. ++. ..+++++++.|+|||++++...
T Consensus 187 ~fD~V~~~~-----~~~--~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 187 TFDAVALDM-----LNP--HVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -EEEEEECS-----SST--TTTHHHHGGGEEEEEEEEEEES
T ss_pred CeeEEEECC-----CCH--HHHHHHHHHhcCCCcEEEEEeC
Confidence 478888732 221 2489999999999999998764
No 235
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=90.76 E-value=0.083 Score=34.99 Aligned_cols=38 Identities=13% Similarity=0.189 Sum_probs=29.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 45 (107)
.||++++.... ...++++++.+.|+|||.+++......
T Consensus 186 ~~D~Vi~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 186 VADRVIMGYVH------KTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp CEEEEEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred CceEEEECCcc------cHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 58988876543 346789999999999999998876643
No 236
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=90.34 E-value=0.28 Score=34.09 Aligned_cols=41 Identities=5% Similarity=0.045 Sum_probs=29.1
Q ss_pred ceeEEEecccccCCCh-------HHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDD-------ENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++.--....+. .....+++++.+.|+|||.+++...
T Consensus 289 ~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 289 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 5899988432211111 3467899999999999999988764
No 237
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=89.74 E-value=0.35 Score=33.55 Aligned_cols=41 Identities=12% Similarity=0.055 Sum_probs=28.6
Q ss_pred ceeEEEecccccCCCh-------HHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDD-------ENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||+|++.--....+. ....++++++.+.|+|||.+++...
T Consensus 279 ~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 279 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 5899887332211111 3357899999999999999988763
No 238
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=89.16 E-value=0.53 Score=32.13 Aligned_cols=39 Identities=21% Similarity=0.145 Sum_probs=26.6
Q ss_pred eeEEEecccccCCCh--HH----HHHHHHHHHhhCCCCCEEEEEe
Q 042267 3 VYLSILQWMLHNFDD--EN----CIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d--~~----~~~iL~~~~~aL~pgg~l~i~e 41 (107)
+|++++.--.+.... .+ ...+++++++.|+|||+++++.
T Consensus 273 ~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 273 VDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp CSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 588887544332111 11 3689999999999999999864
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=88.93 E-value=0.21 Score=35.90 Aligned_cols=24 Identities=29% Similarity=0.458 Sum_probs=20.1
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 21 IKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.++|+++.+.|+|||+|+......
T Consensus 214 ~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 214 QEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHHHHHTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhcCCCcEEEEEEeec
Confidence 388999999999999998876543
No 240
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=88.82 E-value=0.32 Score=30.13 Aligned_cols=30 Identities=3% Similarity=-0.029 Sum_probs=20.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKAL 31 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL 31 (107)
.||+|++...+|.+++....++++++.+.+
T Consensus 110 ~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 110 KYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred CeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 589999999999998755568899999988
No 241
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=88.78 E-value=0.078 Score=38.83 Aligned_cols=44 Identities=11% Similarity=0.165 Sum_probs=35.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 45 (107)
+||+|+...+|||.+|++...-+.++.+.|+++|+.++...+..
T Consensus 134 ~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~ 177 (569)
T 4azs_A 134 EFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVK 177 (569)
T ss_dssp SCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCT
T ss_pred CccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEeccc
Confidence 59999999999999988755556678888999988888776543
No 242
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=88.61 E-value=2.7 Score=27.61 Aligned_cols=68 Identities=9% Similarity=-0.036 Sum_probs=46.2
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHH
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTAL 82 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~l 82 (107)
||+|++.++. .+-...+|....+.|++++++++.- .. ...++++|
T Consensus 91 ~D~IviagmG----g~lI~~IL~~~~~~L~~~~~lIlq~-~~------------------------------~~~~lr~~ 135 (244)
T 3gnl_A 91 IDTIVIAGMG----GTLIRTILEEGAAKLAGVTKLILQP-NI------------------------------AAWQLREW 135 (244)
T ss_dssp CCEEEEEEEC----HHHHHHHHHHTGGGGTTCCEEEEEE-SS------------------------------CHHHHHHH
T ss_pred ccEEEEeCCc----hHHHHHHHHHHHHHhCCCCEEEEEc-CC------------------------------ChHHHHHH
Confidence 7888775543 3447789999999999888876642 10 13577899
Q ss_pred HHHcCCCceEEEEc---CCceeEEEE
Q 042267 83 AIEAGFKGINFECN---VCNSYVMEF 105 (107)
Q Consensus 83 l~~aGf~~~~~~~~---~~~~~vi~~ 105 (107)
|.+.||.+.+..-+ +-+.-++.+
T Consensus 136 L~~~Gf~i~~E~lv~e~~k~Yeii~~ 161 (244)
T 3gnl_A 136 SEQNNWLITSEAILREDNKVYEIMVL 161 (244)
T ss_dssp HHHHTEEEEEEEEEEETTEEEEEEEE
T ss_pred HHHCCCEEEEEEEEEECCEEEEEEEE
Confidence 99999998765422 334455554
No 243
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=88.44 E-value=0.47 Score=31.78 Aligned_cols=61 Identities=7% Similarity=0.078 Sum_probs=40.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHH
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTA 81 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ 81 (107)
.||.|++... +. +..+|..+.+.|+|||.|.+.+.+..+... ....+.+++
T Consensus 192 ~~D~Vi~~~p----~~--~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~-----------------------~~~~e~i~~ 242 (278)
T 3k6r_A 192 IADRILMGYV----VR--THEFIPKALSIAKDGAIIHYHNTVPEKLMP-----------------------REPFETFKR 242 (278)
T ss_dssp CEEEEEECCC----SS--GGGGHHHHHHHEEEEEEEEEEEEEEGGGTT-----------------------TTTHHHHHH
T ss_pred CCCEEEECCC----Cc--HHHHHHHHHHHcCCCCEEEEEeeecccccc-----------------------hhHHHHHHH
Confidence 4787776422 11 357888889999999999888866432211 013456778
Q ss_pred HHHHcCCCce
Q 042267 82 LAIEAGFKGI 91 (107)
Q Consensus 82 ll~~aGf~~~ 91 (107)
+.++.|++..
T Consensus 243 ~~~~~g~~v~ 252 (278)
T 3k6r_A 243 ITKEYGYDVE 252 (278)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHcCCcEE
Confidence 8888998754
No 244
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=88.22 E-value=0.6 Score=31.09 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=17.2
Q ss_pred HHHHHHHH-hhCCCCCEEEE
Q 042267 21 IKILRNCY-KALPNDGKVLV 39 (107)
Q Consensus 21 ~~iL~~~~-~aL~pgg~l~i 39 (107)
..+++++. +.|+|||.+++
T Consensus 228 l~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 228 LDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp CHHHHHHHHHCCCTTCEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEE
Confidence 37899999 99999999986
No 245
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=87.92 E-value=0.15 Score=33.01 Aligned_cols=20 Identities=25% Similarity=0.282 Sum_probs=18.2
Q ss_pred HHHHHHHHhhCCCCCEEEEE
Q 042267 21 IKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~ 40 (107)
..+++++.+.|+|||.+++.
T Consensus 153 ~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 153 NTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEE
Confidence 48999999999999999885
No 246
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=86.56 E-value=0.28 Score=34.72 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=29.1
Q ss_pred ceeEEEecccccCCCh-H--------------HHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDD-E--------------NCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-~--------------~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+..--++.... + ....+++++.+.|+|||++.++-
T Consensus 253 ~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 253 LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 5899988765543221 1 12478999999999999998865
No 247
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=86.21 E-value=0.72 Score=32.33 Aligned_cols=42 Identities=10% Similarity=0.130 Sum_probs=28.1
Q ss_pred ceeEEEecccccCCCh-------HHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWMLHNFDD-------ENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-------~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
+||+|++.--....+. ..-.++++.+.+.|+|||.+++....
T Consensus 280 ~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 280 PFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3888887432211111 22468899999999999999876643
No 248
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=84.57 E-value=0.54 Score=28.32 Aligned_cols=19 Identities=16% Similarity=0.263 Sum_probs=17.8
Q ss_pred HHHHHHHHhhCCCCCEEEE
Q 042267 21 IKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i 39 (107)
+++++.++++|+|||++.-
T Consensus 78 r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 78 KKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp HHHHHHHHTTCCTTCCEEC
T ss_pred HHHHHHHHHHhCCCCEEEe
Confidence 7899999999999999976
No 249
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=84.52 E-value=0.48 Score=32.04 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeeCCC
Q 042267 18 ENCIKILRNCYKALPNDGKVLVINSTLPE 46 (107)
Q Consensus 18 ~~~~~iL~~~~~aL~pgg~l~i~e~~~~~ 46 (107)
++..+.|..+.+.|+|||+++|+-+..=+
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHSLE 238 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHSLE 238 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCcHH
Confidence 34678899999999999999999876533
No 250
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=84.29 E-value=0.47 Score=32.93 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 18 ENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 18 ~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
++..+.|..+.+.|+|||+|+|+-+..
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFHS 277 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFHS 277 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 346788999999999999999998754
No 251
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=84.17 E-value=0.96 Score=31.44 Aligned_cols=39 Identities=10% Similarity=0.012 Sum_probs=27.9
Q ss_pred ceeEEEecccc--------cCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWML--------HNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vl--------h~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++.--. ++.. .....++.++.+.|+|||.+++..
T Consensus 293 ~fD~Ii~dpP~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 293 KFDVIVMDPPKFVENKSQLMGAC-RGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp CEEEEEECCSSTTTCSSSSSCCC-THHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCEEEECCCCCCCChhHHHHHH-HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 58988875321 1111 336789999999999999998855
No 252
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=83.35 E-value=0.39 Score=32.56 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=26.0
Q ss_pred ceeEEEecccccCCChHH---HHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDEN---CIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~---~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+.-.. ....... ...+++.++++|+|||.++..-
T Consensus 157 ~yDvIi~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 157 TFDVIISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CEEEEEESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCEEEEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 5888876432 1111111 2578999999999999998753
No 253
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=83.30 E-value=0.51 Score=32.85 Aligned_cols=40 Identities=13% Similarity=0.193 Sum_probs=27.4
Q ss_pred ceeEEEecccc-----cCCCh--HHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWML-----HNFDD--ENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vl-----h~~~d--~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++.--. +...+ ....++++.+.+.|+|||.+++..
T Consensus 285 ~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 285 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 58999974322 12222 235678899999999999998754
No 254
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=82.82 E-value=1.3 Score=30.60 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=18.2
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 042267 22 KILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 22 ~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.+++++.+.|+|||+++++-+
T Consensus 145 ~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 145 AFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEC
Confidence 679999999999999988653
No 255
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=80.37 E-value=1.3 Score=29.88 Aligned_cols=38 Identities=11% Similarity=0.067 Sum_probs=26.3
Q ss_pred ceeEEEeccccc---CCChH-HHHHHHHHHHhhCCCC-CEEEE
Q 042267 2 QVYLSILQWMLH---NFDDE-NCIKILRNCYKALPND-GKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~vlh---~~~d~-~~~~iL~~~~~aL~pg-g~l~i 39 (107)
.+|+|+.--..+ .|-|. ....+|+.+.+.|+|| |.+++
T Consensus 140 ~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 140 KCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 478888755444 12232 2345789999999999 99887
No 256
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=79.89 E-value=0.93 Score=30.86 Aligned_cols=37 Identities=8% Similarity=0.049 Sum_probs=27.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++.- +. ...++++.+.+.|+|||.+++.+...
T Consensus 258 ~fD~Vi~dp-----P~-~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 258 KGNRVIMNL-----PK-FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CEEEEEECC-----TT-TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CCcEEEECC-----cH-hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 578888742 11 12488999999999999999988654
No 257
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=79.31 E-value=1.4 Score=30.84 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=24.0
Q ss_pred ceeEEEecccc-c-CCCh--HHHHHHHHHH----HhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWML-H-NFDD--ENCIKILRNC----YKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vl-h-~~~d--~~~~~iL~~~----~~aL~pgg~l~i~e 41 (107)
.||+|++--.- . .... --...+++.+ +++|+|||.+++.-
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 58998875432 1 0001 0124555655 99999999997753
No 258
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=78.87 E-value=0.87 Score=30.78 Aligned_cols=27 Identities=26% Similarity=0.374 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 18 ENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 18 ~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
++..+.|..+.+.|+|||++.|+-+..
T Consensus 222 ~~l~~~l~~~~~~l~~ggr~~visfhs 248 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLNPGGRIVVISFHS 248 (301)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESSH
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEecCc
Confidence 346788999999999999999998543
No 259
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=78.80 E-value=0.82 Score=34.49 Aligned_cols=40 Identities=18% Similarity=0.340 Sum_probs=27.7
Q ss_pred ceeEEEecccc--------cCCC-hHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWML--------HNFD-DENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vl--------h~~~-d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++.--. +.+. ..+..++++++.+.|+|||.+++..
T Consensus 609 ~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 609 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp CEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 58999874321 1122 1346789999999999999998543
No 260
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=78.26 E-value=1.2 Score=31.09 Aligned_cols=37 Identities=27% Similarity=0.267 Sum_probs=26.2
Q ss_pred ceeEEEecccccCCChH-HHHHHHHHHHhhCCCCCEEE
Q 042267 2 QVYLSILQWMLHNFDDE-NCIKILRNCYKALPNDGKVL 38 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~-~~~~iL~~~~~aL~pgg~l~ 38 (107)
.+|+++.-++-+....+ ....++....+.|+|||+++
T Consensus 149 ~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 149 QVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 58999875544333332 35678888889999999875
No 261
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=76.82 E-value=1.6 Score=30.64 Aligned_cols=21 Identities=33% Similarity=0.311 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 042267 20 CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~ 40 (107)
...+++.++++|+|||.++..
T Consensus 310 t~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 310 LRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEe
Confidence 357889999999999998764
No 262
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=75.84 E-value=5.1 Score=23.30 Aligned_cols=27 Identities=19% Similarity=0.154 Sum_probs=22.9
Q ss_pred ChHHHHHHHHHHHhhCCCC--CEEEEEee
Q 042267 16 DDENCIKILRNCYKALPND--GKVLVINS 42 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~pg--g~l~i~e~ 42 (107)
+|+.+.+++..+.+++..| |++.+.+.
T Consensus 82 ~de~ve~vv~~I~~~~~tg~~GkIFV~~V 110 (119)
T 2cz4_A 82 SEEVALRILQRLQEEYFPHYAVIAYVENV 110 (119)
T ss_dssp CHHHHHHHHHHHHHHTTTTSCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCCEEEEEEEe
Confidence 6788999999999888887 99888764
No 263
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=74.56 E-value=3.7 Score=25.25 Aligned_cols=30 Identities=10% Similarity=0.052 Sum_probs=24.5
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKAL 31 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL 31 (107)
.||+|++.-.+|.+......++++++.+.+
T Consensus 112 ~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 112 RVDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CCSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred CCCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 589999988888887655578899999888
No 264
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=74.17 E-value=7.6 Score=24.53 Aligned_cols=22 Identities=23% Similarity=0.185 Sum_probs=18.8
Q ss_pred ecCHHHHHHHHHHcCCCceEEEE
Q 042267 73 ERTKKEFTALAIEAGFKGINFEC 95 (107)
Q Consensus 73 ~rt~~e~~~ll~~aGf~~~~~~~ 95 (107)
.++.+|++ +|+++||+.+++..
T Consensus 209 ~~~~~e~~-~l~~aGF~~~~~~~ 230 (252)
T 1wzn_A 209 IYTPREVR-LLAEKYFEKVKIYG 230 (252)
T ss_dssp CCCHHHHH-HHHTTTSSEEEEEE
T ss_pred eecHHHHH-HHHHhcCceeeeec
Confidence 47899997 89999999998854
No 265
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=72.86 E-value=2 Score=29.85 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=21.5
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeCCC
Q 042267 21 IKILRNCYKALPNDGKVLVINSTLPE 46 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~~~ 46 (107)
.+||+++.+.|+|||+|+-.-.-+..
T Consensus 264 ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 264 VQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp HHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred HHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 57899999999999999887765543
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=70.82 E-value=3.6 Score=30.04 Aligned_cols=40 Identities=8% Similarity=0.104 Sum_probs=28.1
Q ss_pred ceeEEEecccccCCC------------hHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFD------------DENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~------------d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|+..--+.... ...-..+++++.+.|+|||++.++-
T Consensus 261 ~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 261 KAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp CEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 589888865443221 1113478999999999999998873
No 267
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=70.66 E-value=2.4 Score=18.53 Aligned_cols=18 Identities=17% Similarity=0.659 Sum_probs=14.3
Q ss_pred HHHHHHHHHhhCCCCCEE
Q 042267 20 CIKILRNCYKALPNDGKV 37 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l 37 (107)
|+.+++++...++.+|++
T Consensus 4 cr~likriqa~ipk~grm 21 (34)
T 1ssz_A 4 CRALIKRIQAMIPKGGRM 21 (34)
T ss_dssp HHHHHHHHHHHCSSSCCC
T ss_pred HHHHHHHHHHHccccchh
Confidence 567888888888888875
No 268
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=68.71 E-value=7.1 Score=25.83 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=23.7
Q ss_pred ceeEEEeccccc-CCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLH-NFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh-~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
+||+|++.++=. .++++ ..+.|++..+ .||.|+++-
T Consensus 50 ~yDvIIl~d~~~~~l~~~-~~~~L~~yV~---~GGgLi~~g 86 (259)
T 3rht_A 50 KQDLVILSDYPAERMTAQ-AIDQLVTMVK---AGCGLVMLG 86 (259)
T ss_dssp TCSEEEEESCCGGGBCHH-HHHHHHHHHH---TTCEEEEEC
T ss_pred cCCEEEEcCCccccCCHH-HHHHHHHHHH---hCCeEEEec
Confidence 689999998654 34543 4555555554 488887774
No 269
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=68.38 E-value=2.4 Score=28.25 Aligned_cols=20 Identities=15% Similarity=0.567 Sum_probs=17.4
Q ss_pred HHHHHHHHhhCCCCCEEEEE
Q 042267 21 IKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~ 40 (107)
..+++.+++.|+|||.+++.
T Consensus 77 ~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 77 DRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEE
Confidence 46788999999999999775
No 270
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=67.81 E-value=1.2 Score=29.52 Aligned_cols=35 Identities=9% Similarity=-0.025 Sum_probs=22.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHH--------------H--HhhCCCCCEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRN--------------C--YKALPNDGKV 37 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~--------------~--~~aL~pgg~l 37 (107)
.+|+++. +.-++|..+....+|.. + +..|+|||++
T Consensus 93 ~fD~vv~-nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 93 FFDTCVA-NLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp CCSEEEE-ECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred hhcEEEE-ecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 3677776 44456666555566642 2 3689999965
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=66.55 E-value=6.7 Score=24.95 Aligned_cols=35 Identities=0% Similarity=-0.074 Sum_probs=22.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
.||+|++-.-. ...-+..+.+.|+|||.| |+|.+.
T Consensus 122 ~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~I-v~DNv~ 156 (202)
T 3cvo_A 122 HPDVVLVDGRF-------RVGCALATAFSITRPVTL-LFDDYS 156 (202)
T ss_dssp CCSEEEECSSS-------HHHHHHHHHHHCSSCEEE-EETTGG
T ss_pred CCCEEEEeCCC-------chhHHHHHHHhcCCCeEE-EEeCCc
Confidence 36777765421 124455567889999988 556543
No 272
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=66.43 E-value=5.7 Score=24.86 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=21.1
Q ss_pred CCc-eecCHHHHHHHHHHcCCCceEEE
Q 042267 69 PHG-RERTKKEFTALAIEAGFKGINFE 94 (107)
Q Consensus 69 ~~g-~~rt~~e~~~ll~~aGf~~~~~~ 94 (107)
.|| +.-.-+|++++|+++||+.++.+
T Consensus 16 VGG~nkv~MadLr~~l~~lGf~~V~Ty 42 (183)
T 2hiy_A 16 VGGKNKVVMAELRQELTNLGLEKVESY 42 (183)
T ss_dssp CC-CCCCCHHHHHHHHHHHTCEEEEEE
T ss_pred cCCCCcccHHHHHHHHHHcCCccceEE
Confidence 355 45679999999999999998875
No 273
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=65.82 E-value=28 Score=23.87 Aligned_cols=21 Identities=29% Similarity=0.332 Sum_probs=15.5
Q ss_pred HHHHHHHHHHcCCCceEEEEc
Q 042267 76 KKEFTALAIEAGFKGINFECN 96 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~~~~ 96 (107)
.+.+++.+++.||+..+..++
T Consensus 332 ~~~~~~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 332 KKAIEEAIAENGFEIIHHRVI 352 (373)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEEE
Confidence 356667888899998876655
No 274
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=65.63 E-value=4.8 Score=23.48 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=25.4
Q ss_pred cccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 11 MLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 11 vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
-+|-|..+++.++++++-+. .++|.++-+|
T Consensus 66 el~~WKp~eVdkm~~k~~q~-~~dGl~iYCD 95 (126)
T 2rbg_A 66 ELFLWKKNEVDIFLKNLEKS-EVDGLLVYCD 95 (126)
T ss_dssp EEEEECGGGHHHHHHHHTTC-CCCEEEEEEC
T ss_pred EEEEeCHHHHHHHHHHHHHh-CCCceEEEeC
Confidence 35789999999999999987 8889887766
No 275
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=64.24 E-value=6.9 Score=27.18 Aligned_cols=23 Identities=17% Similarity=0.192 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEe
Q 042267 19 NCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 19 ~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.+...|.++.+.|+|||.|++.-
T Consensus 117 ~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 117 YVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEEE
Confidence 47889999999999999998875
No 276
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=63.79 E-value=3.4 Score=23.50 Aligned_cols=31 Identities=6% Similarity=0.100 Sum_probs=23.8
Q ss_pred CceecCHHHHHHHHHHcCCCceEEEEcCCce
Q 042267 70 HGRERTKKEFTALAIEAGFKGINFECNVCNS 100 (107)
Q Consensus 70 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~ 100 (107)
-|...+.+++.+.|.+.|++.......+|.+
T Consensus 19 ~G~~i~~~~l~~~L~~~GY~r~~~v~~~Gef 49 (106)
T 3fpn_B 19 VGMEIERNALLRRLVDIQYDRNDIDFRRGTF 49 (106)
T ss_dssp TTCBCCHHHHHHHHHHTTCEECTTCCCTTEE
T ss_pred CCCCcCHHHHHHHHHHcCCEECCccCCcEEE
Confidence 6778899999999999999876554434433
No 277
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=61.50 E-value=4.6 Score=27.53 Aligned_cols=22 Identities=14% Similarity=-0.084 Sum_probs=16.3
Q ss_pred HHHHHHHHHHcCCCceEEEEcC
Q 042267 76 KKEFTALAIEAGFKGINFECNV 97 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~~~~~ 97 (107)
...+++-|+++||++.++...+
T Consensus 228 ag~VRR~L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 228 SLSVRKSLLTLGFKVGSSREIG 249 (308)
T ss_dssp CHHHHHHHHHTTCEEEEEECC-
T ss_pred cHHHHHHHHHCCCEEEecCCCC
Confidence 3677888999999988775443
No 278
>3cxj_A Uncharacterized protein; PSI-II, structural genomics structure initiative; 2.80A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=59.57 E-value=5.5 Score=24.71 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=17.6
Q ss_pred cCHHHHHHHHHHcCCCceEEE
Q 042267 74 RTKKEFTALAIEAGFKGINFE 94 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~~~~ 94 (107)
.|.+++++||.+.||.+.++.
T Consensus 3 ~~~~~I~~WL~eeG~~v~~~~ 23 (165)
T 3cxj_A 3 LSQEMIKKWLDEEGFLRMEVP 23 (165)
T ss_dssp CHHHHHHHHHHHTTCEEEECC
T ss_pred ccHHHHHHHHHHcCceEecCC
Confidence 357899999999999988654
No 279
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=59.56 E-value=7.6 Score=20.00 Aligned_cols=20 Identities=15% Similarity=0.017 Sum_probs=16.7
Q ss_pred cCHHHHHHHHHHcCCCceEE
Q 042267 74 RTKKEFTALAIEAGFKGINF 93 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~~~ 93 (107)
.+..|+.++|++.||...+.
T Consensus 5 ~~~~elik~L~~~G~~~~r~ 24 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERMA 24 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCEEeCC
Confidence 46789999999999987653
No 280
>2dwf_A Pulmonary surfactant-associated protein B; mini-B, SP-B, surfactant protein B, lipid associated protein, surface active protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 2jou_A
Probab=58.99 E-value=5 Score=17.87 Aligned_cols=18 Identities=17% Similarity=0.659 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhCCCCCEE
Q 042267 20 CIKILRNCYKALPNDGKV 37 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l 37 (107)
|..+++++....+.||++
T Consensus 4 Crtlikriq~vIPk~~r~ 21 (34)
T 2dwf_A 4 CRALIKRIQAMIPKGGRM 21 (34)
T ss_dssp HHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHhhcCCcccc
Confidence 567888888888888554
No 281
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=57.71 E-value=4.9 Score=27.17 Aligned_cols=21 Identities=24% Similarity=0.306 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 042267 20 CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~ 40 (107)
....|+.+++.|+|||.+++.
T Consensus 63 l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 63 FLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHCcCCcEEEEE
Confidence 678899999999999999885
No 282
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=53.50 E-value=3.5 Score=22.23 Aligned_cols=19 Identities=32% Similarity=0.244 Sum_probs=15.1
Q ss_pred ecCHHHHHHHHHHcCCCce
Q 042267 73 ERTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 73 ~rt~~e~~~ll~~aGf~~~ 91 (107)
+....|-..||+.+||..+
T Consensus 18 E~eA~eAC~WLRaaGFPQY 36 (81)
T 2h80_A 18 EIEAKEACDWLRAAGFPQY 36 (81)
T ss_dssp HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHH
Confidence 3455778899999999875
No 283
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=52.55 E-value=27 Score=23.24 Aligned_cols=40 Identities=18% Similarity=0.289 Sum_probs=24.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~ 45 (107)
+||++++...-..++++.. +++.+.++.||-++.+.....
T Consensus 58 ~~D~vV~~~~~~~l~~~~~----~~l~~yV~~Ggglv~~H~a~~ 97 (281)
T 4e5v_A 58 PYQLVVLDYNGDSWPEETN----RRFLEYVQNGGGVVIYHAADN 97 (281)
T ss_dssp TCSEEEECCCSSCCCHHHH----HHHHHHHHTTCEEEEEGGGGG
T ss_pred cCCEEEEeCCCCcCCHHHH----HHHHHHHHcCCCEEEEecccc
Confidence 6899997665445566433 333334445888888776443
No 284
>2yjg_A Lactate racemase apoprotein; isomerase, nickel-dependent enzyme; 1.80A {Thermoanaerobacterium thermosaccharolyorganism_taxid}
Probab=55.54 E-value=3.4 Score=29.51 Aligned_cols=45 Identities=9% Similarity=0.005 Sum_probs=32.5
Q ss_pred ceeEEEeccc-c-cCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCC
Q 042267 2 QVYLSILQWM-L-HNFDDENCIKILRNCYKALPNDGKVLVINSTLPE 46 (107)
Q Consensus 2 ~~D~v~~~~v-l-h~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~ 46 (107)
++|+++.+.- . -|.+-=++.+-+.++..++++||.+++.-.+.+.
T Consensus 276 ~~DvvI~s~gG~P~d~n~yqa~Kal~~a~~~v~~GG~iIl~a~c~~g 322 (436)
T 2yjg_A 276 PADIVITSNGGYPLDQNIYQSVKGMTAGEAACKDGGVIIIAAECADG 322 (436)
Confidence 4688887653 1 2333334678999999999999999998777543
No 285
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=48.31 E-value=7.6 Score=25.24 Aligned_cols=21 Identities=14% Similarity=0.390 Sum_probs=17.9
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 042267 20 CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~ 40 (107)
....|+.+++.|+|||.+++.
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEE
Confidence 567788889999999998875
No 286
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=47.12 E-value=5.4 Score=20.20 Aligned_cols=19 Identities=16% Similarity=0.298 Sum_probs=15.8
Q ss_pred HHHHHHHHHHcCCCceEEE
Q 042267 76 KKEFTALAIEAGFKGINFE 94 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~~ 94 (107)
..+|+++|.++|.+..++.
T Consensus 35 pp~W~~ll~~sGIt~~e~k 53 (59)
T 1cee_B 35 DPDLRSLFSRAGISEAQLT 53 (59)
T ss_dssp CHHHHHHHTTTTSCSSCCC
T ss_pred CHHHHHHHHHcCCCHHHHh
Confidence 5899999999999876553
No 287
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=46.79 E-value=19 Score=22.70 Aligned_cols=30 Identities=3% Similarity=0.085 Sum_probs=22.8
Q ss_pred cCCC-hHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 13 HNFD-DENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 13 h~~~-d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
.||. .....++.+++.+.+++|..++++|.
T Consensus 127 ~Dw~~~~~~~~i~~~v~~~~~~g~IiL~Hd~ 157 (216)
T 2c71_A 127 NDWIPSTTAEQRAAAVINGVRDGTIILLHDV 157 (216)
T ss_dssp STTCTTSCHHHHHHHHHHHCCTTBEEEEESC
T ss_pred ccccCCCCHHHHHHHHHhcCCCCcEEEEECC
Confidence 4676 44567888899999999988777764
No 288
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=46.66 E-value=6.2 Score=21.71 Aligned_cols=18 Identities=22% Similarity=0.158 Sum_probs=14.7
Q ss_pred cCHHHHHHHHHHcCCCce
Q 042267 74 RTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~ 91 (107)
....|-..||+.+||..+
T Consensus 21 ~eA~eAC~WLRaaGFPQY 38 (91)
T 2dky_A 21 IEAKEACDWLRATGFPQY 38 (91)
T ss_dssp HHHHHHHHHHHHHTCTTH
T ss_pred HHHHHHHHHHHHcCChHH
Confidence 445778899999999875
No 289
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=46.51 E-value=7.8 Score=20.12 Aligned_cols=17 Identities=18% Similarity=0.169 Sum_probs=14.0
Q ss_pred HHHHHHHHHHcCCCceE
Q 042267 76 KKEFTALAIEAGFKGIN 92 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~ 92 (107)
..||+++|+.+|.+..+
T Consensus 24 p~eW~~ll~~sGIs~~~ 40 (65)
T 2lnh_A 24 DPELKNLFDMCGISEAQ 40 (65)
T ss_dssp CTTHHHHHHHHTCCHHH
T ss_pred CHHHHHHHHHcCCCHHH
Confidence 36999999999988644
No 290
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=46.33 E-value=10 Score=23.52 Aligned_cols=23 Identities=22% Similarity=0.358 Sum_probs=19.3
Q ss_pred CceecCHHHHHHHHHHcCCCceE
Q 042267 70 HGRERTKKEFTALAIEAGFKGIN 92 (107)
Q Consensus 70 ~g~~rt~~e~~~ll~~aGf~~~~ 92 (107)
+....|++|+.+.|++.||.+.+
T Consensus 31 ~~~I~tQeEL~~~L~~~Gi~vTQ 53 (170)
T 3lap_A 31 SAQVRSQNELAALLAAEGIEVTQ 53 (170)
T ss_dssp HSCCCSHHHHHHHHHHTTCCCCH
T ss_pred hCCCCCHHHHHHHHHHcCCCcCc
Confidence 55678999999999999998653
No 291
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=45.75 E-value=41 Score=23.17 Aligned_cols=38 Identities=13% Similarity=0.035 Sum_probs=26.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
+||++++..- -+-+.....|+++...|+||+++++...
T Consensus 100 ~~~~v~~~lp---k~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 100 QPGVVLIKVP---KTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp SCSEEEEECC---SCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred CCCEEEEEcC---CCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 3555555322 1235578889999999999999987765
No 292
>3t9z_A GLNK3, nitrogen regulatory protein P-II (GLNB-3); PII-family, AMT3, signaling protein; HET: FLC; 1.82A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ta0_A* 3ta1_A* 3ta2_A* 3o8w_A
Probab=45.68 E-value=27 Score=20.11 Aligned_cols=28 Identities=14% Similarity=0.329 Sum_probs=21.7
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 042267 15 FDDENCIKILRNCYKALPN---D-GKVLVINS 42 (107)
Q Consensus 15 ~~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 42 (107)
.+|+++.++++.+.++++. | |++++.+.
T Consensus 65 V~de~ve~Vv~~I~~~a~TG~~GDGkIFV~~V 96 (118)
T 3t9z_A 65 VSDDAVDEVVEAIVSSARTGKFGDGRIFVIPV 96 (118)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EChHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 4677788888888888874 3 99988763
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=45.24 E-value=22 Score=24.21 Aligned_cols=38 Identities=11% Similarity=-0.029 Sum_probs=24.4
Q ss_pred ceeEEEecccccCCC----hH-HHHHHHHHHHhhCCCC-CEEEEE
Q 042267 2 QVYLSILQWMLHNFD----DE-NCIKILRNCYKALPND-GKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~----d~-~~~~iL~~~~~aL~pg-g~l~i~ 40 (107)
.+|+++.--.-+ -. |. ....+|+-+.+.|+|| |.+++-
T Consensus 147 ~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 147 PSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 367776643333 11 11 1356788889999999 998875
No 294
>3ncq_A Nitrogen regulatory protein P-II (GLNB-2); PII signaling, nucleotide binding, GLNK, signaling Pro; HET: ATP; 1.24A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ncp_A* 3ncr_A*
Probab=45.22 E-value=28 Score=20.09 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=21.6
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 042267 15 FDDENCIKILRNCYKALPN---D-GKVLVINS 42 (107)
Q Consensus 15 ~~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 42 (107)
.+|+++.++++.+.++++. | |++++.+.
T Consensus 65 V~de~ve~vv~~I~~~a~TG~~GDGkIFV~~V 96 (119)
T 3ncq_A 65 VKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPV 96 (119)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCCEEEEEEh
Confidence 3677788888888888875 3 99998763
No 295
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=43.45 E-value=46 Score=19.19 Aligned_cols=47 Identities=9% Similarity=0.181 Sum_probs=32.0
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEE
Q 042267 21 IKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINF 93 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 93 (107)
.+++.++. +++.|.++.|.-++.....+ +..+..+++++.||..+++
T Consensus 7 ~qivd~il-~~~egtri~iLAPvv~~rKg-------------------------~~~~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 7 EQMVDRLL-SYPERTKMQILAPIVSGKKG-------------------------THAKTLEDIRKQGYVRVRI 53 (119)
T ss_dssp HHHHHHHH-TSCTTCEEEEEEEEEEEECS-------------------------CCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH-hCCCCCEEEEEEEEeeCCCC-------------------------cHHHHHHHHHhCCCeEEEE
Confidence 45666666 47889999998877542211 2356677777889998766
No 296
>3l7p_A Putative nitrogen regulatory protein PII; SMU_1 transcription, transcription regulation; 2.00A {Streptococcus mutans} SCOP: d.58.5.1
Probab=43.01 E-value=33 Score=19.62 Aligned_cols=27 Identities=19% Similarity=0.309 Sum_probs=21.3
Q ss_pred CChHHHHHHHHHHHhhCCCC----CEEEEEe
Q 042267 15 FDDENCIKILRNCYKALPND----GKVLVIN 41 (107)
Q Consensus 15 ~~d~~~~~iL~~~~~aL~pg----g~l~i~e 41 (107)
.+|+++.++++.+.++++.| |++++.+
T Consensus 68 V~d~~ve~vv~~I~~~a~tg~~GDGkIFV~~ 98 (115)
T 3l7p_A 68 AHDAAVEEMITTISQAVKTGEVGDGKIFVSP 98 (115)
T ss_dssp ECGGGHHHHHHHHHHHHCCC----CEEEEEE
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCcEEEEEE
Confidence 46777888888888888763 9998876
No 297
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=42.99 E-value=70 Score=21.11 Aligned_cols=46 Identities=2% Similarity=-0.158 Sum_probs=31.2
Q ss_pred ceeEEEecccccCCChH-----HHHHHHHHHHhhCCCCCEEEEEeeeCCCC
Q 042267 2 QVYLSILQWMLHNFDDE-----NCIKILRNCYKALPNDGKVLVINSTLPEV 47 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~-----~~~~iL~~~~~aL~pgg~l~i~e~~~~~~ 47 (107)
.+|+|++...-+.-... ...++...+++..+||.++++.+......
T Consensus 93 ~wD~VilQe~S~~~~~~~~~~~~~~~l~~~ir~~~~p~ak~il~~TWa~~~ 143 (271)
T 4i8i_A 93 KWDYISVQQASPLSGIYDSYKASLPELVNYIRERIGKETVLMMHQTWAYAT 143 (271)
T ss_dssp CCSEEEECCCGGGTTCHHHHHHHHHHHHHHHHTTSCTTCEEEEEECCCCCT
T ss_pred CCCEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCCEEEEEeccCCCC
Confidence 47888888876544322 25566666666666999999999875443
No 298
>4aff_A Nitrogen regulatory protein P-II; signaling protein; HET: ATP FLC; 1.05A {Synechococcus elongatus} SCOP: d.58.5.1 PDB: 2xun_A* 2xul_A* 2xzw_A* 2xbp_A* 2v5h_G* 2jj4_D* 2xg8_A 1qy7_A 3n5b_A* 1ul3_A
Probab=42.31 E-value=28 Score=19.92 Aligned_cols=27 Identities=19% Similarity=0.308 Sum_probs=21.1
Q ss_pred CChHHHHHHHHHHHhhCCC---C-CEEEEEe
Q 042267 15 FDDENCIKILRNCYKALPN---D-GKVLVIN 41 (107)
Q Consensus 15 ~~d~~~~~iL~~~~~aL~p---g-g~l~i~e 41 (107)
.+|+++.++++.+.++++. | |++++.+
T Consensus 65 V~d~~ve~vv~~I~~~a~Tg~~GDGkIFV~~ 95 (116)
T 4aff_A 65 VEDAQVDTVIDKIVAAARTGENGDGKIFVSP 95 (116)
T ss_dssp ECGGGHHHHHHHHHHHHCCSSTTCEEEEEEE
T ss_pred EcHHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence 3677788888888888875 3 8998876
No 299
>1vfj_A Nitrogen regulatory protein P-II; structural genomics, signal transducing protein, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: d.58.5.1 PDB: 1ufl_A 1v3s_A* 1v9o_A* 1v3r_A
Probab=41.78 E-value=35 Score=19.30 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=20.3
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEe
Q 042267 16 DDENCIKILRNCYKALPN----DGKVLVIN 41 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p----gg~l~i~e 41 (107)
+|+++.++++.+.++++. +|++++.+
T Consensus 66 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~p 95 (116)
T 1vfj_A 66 SEPFVKPTVEAILKAARTGEVGDGKIFVLP 95 (116)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 677788888888888776 48888875
No 300
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=41.74 E-value=22 Score=24.88 Aligned_cols=34 Identities=6% Similarity=-0.012 Sum_probs=24.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++-- ... ...++..+.+.|+|||.|++.-
T Consensus 125 ~fD~V~lDP--~g~----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 125 GFDYVDLDP--FGT----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CEEEEEECC--SSC----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcEEEECC--CcC----HHHHHHHHHHHhCCCCEEEEEe
Confidence 478888754 111 1368999999999999776654
No 301
>3mhy_A PII-like protein PZ; PII protein, alpha-beta protein, homotrimer, signaling prote; HET: PG6 ATP AKG MES; 1.40A {Azospirillum brasilense} SCOP: d.58.5.1 PDB: 3o5t_B*
Probab=41.47 E-value=27 Score=19.75 Aligned_cols=26 Identities=23% Similarity=0.469 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHHhhCCC---C-CEEEEEe
Q 042267 16 DDENCIKILRNCYKALPN---D-GKVLVIN 41 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p---g-g~l~i~e 41 (107)
+|+++.++++.+.++.+. | |++++.+
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkIfV~~ 95 (112)
T 3mhy_A 66 SDDQYEQVVEAIQKAANTGRIGDGKIFVLD 95 (112)
T ss_dssp CTTTHHHHHHHHHHHHCCSSTTCCEEEEEE
T ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence 566677777777777765 3 9998876
No 302
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=40.86 E-value=13 Score=25.14 Aligned_cols=21 Identities=14% Similarity=0.325 Sum_probs=18.2
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 042267 20 CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~ 40 (107)
....|+.+++.|+|||.+++.
T Consensus 85 ~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 85 AKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEE
Confidence 567888999999999999885
No 303
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=40.77 E-value=8.1 Score=26.03 Aligned_cols=39 Identities=8% Similarity=-0.047 Sum_probs=24.0
Q ss_pred ceeEEEeccccc---CCChH-HHHHHHHHHHhhCCCC--CEEEEE
Q 042267 2 QVYLSILQWMLH---NFDDE-NCIKILRNCYKALPND--GKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh---~~~d~-~~~~iL~~~~~aL~pg--g~l~i~ 40 (107)
.+|+|+.--.-+ .+-|+ ....+|+-+.+.|+|| |.+++-
T Consensus 156 ~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 156 PGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 467776654443 01122 2345688888999998 888774
No 304
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=40.64 E-value=19 Score=22.59 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=17.6
Q ss_pred CceecCHHHHHHHHHHcCCCc
Q 042267 70 HGRERTKKEFTALAIEAGFKG 90 (107)
Q Consensus 70 ~g~~rt~~e~~~ll~~aGf~~ 90 (107)
.....|++|+.+.|++.||.+
T Consensus 44 ~~~I~TQeEL~~~L~~~Gi~v 64 (180)
T 3v4g_A 44 EERFGSQGEIVEALKQEGFEN 64 (180)
T ss_dssp HTCCCSHHHHHHHHHHTTCTT
T ss_pred hCCcCCHHHHHHHHHHCCCcc
Confidence 445688999999999999988
No 305
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=40.06 E-value=16 Score=25.33 Aligned_cols=34 Identities=12% Similarity=0.079 Sum_probs=23.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.||+|++-- . .. ...++..+.+.|+|||.+++.-
T Consensus 131 ~fD~I~lDP-~---~~--~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 131 YFHFIDLDP-F---GS--PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp CEEEEEECC-S---SC--CHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEeCC-C---CC--HHHHHHHHHHhcCCCCEEEEEe
Confidence 478877422 1 11 2578999999999999877653
No 306
>2ns1_B Nitrogen regulatory protein P-II 2; protein-protein complex, membrane protein, ammonia, channel, inhibitor, signal protein, ADP, BOG; HET: BOG ADP; 1.96A {Escherichia coli} SCOP: d.58.5.1 PDB: 1gnk_A 2nuu_G* 2gnk_A*
Probab=39.39 E-value=30 Score=19.60 Aligned_cols=27 Identities=26% Similarity=0.340 Sum_probs=20.7
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 042267 16 DDENCIKILRNCYKALPN----DGKVLVINS 42 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p----gg~l~i~e~ 42 (107)
+|+.+.++++.+.++++. +|++++.+-
T Consensus 70 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 100 (116)
T 2ns1_B 70 ADDQLDEVIDIVSKAAYTGKIGDGKIFVAEL 100 (116)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 567788888888888776 589988763
No 307
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=39.20 E-value=49 Score=18.27 Aligned_cols=28 Identities=11% Similarity=0.083 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCCceEEEEc-CCceeEE
Q 042267 76 KKEFTALAIEAGFKGINFECN-VCNSYVM 103 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~~~~-~~~~~vi 103 (107)
.+.+.+|+++.|++....... .+.+.++
T Consensus 66 ~~dI~~~~~~~G~~v~~~e~~~~g~~~i~ 94 (98)
T 1jdq_A 66 KERIPETVKKLGHEVLEIEEVGPSEWKIY 94 (98)
T ss_dssp HHHHHHHHHHSSCCEEEEEECSSSCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEecCCEEEEE
Confidence 468889999999999877655 3444443
No 308
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=38.51 E-value=27 Score=26.81 Aligned_cols=37 Identities=14% Similarity=-0.033 Sum_probs=25.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVL 38 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~ 38 (107)
.+|+++.-+.=.....+-....|..+.+-|+|||.++
T Consensus 495 kVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 495 QPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp CCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 4788887776333333435678888889999999753
No 309
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=38.30 E-value=23 Score=18.85 Aligned_cols=18 Identities=11% Similarity=0.163 Sum_probs=15.7
Q ss_pred cCHHHHHHHHHHcCCCce
Q 042267 74 RTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~ 91 (107)
.+.+++.+-|+++||++.
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 577999999999999875
No 310
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=38.07 E-value=59 Score=22.54 Aligned_cols=40 Identities=5% Similarity=-0.091 Sum_probs=25.2
Q ss_pred ceeEEEeccccc-CCC-hHHHHHHHHHHHhhCCC--CCEEEEEe
Q 042267 2 QVYLSILQWMLH-NFD-DENCIKILRNCYKALPN--DGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh-~~~-d~~~~~iL~~~~~aL~p--gg~l~i~e 41 (107)
.+|+|++.--.+ ... +++...+.+.+.+.|++ |+++.++-
T Consensus 300 ~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 300 INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 467777663332 222 34567777777777766 88888764
No 311
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=38.06 E-value=21 Score=20.11 Aligned_cols=20 Identities=15% Similarity=0.009 Sum_probs=16.8
Q ss_pred cCHHHHHHHHHHcCCCceEE
Q 042267 74 RTKKEFTALAIEAGFKGINF 93 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~~~ 93 (107)
-+.+|.++||..-||+..-+
T Consensus 24 Ssp~EV~~WL~~kgFS~~tv 43 (99)
T 1wwu_A 24 SGPDEVRAWLEAKAFSPRIV 43 (99)
T ss_dssp CCHHHHHHHHHHHTCCTTHH
T ss_pred CCHHHHHHHHHHcCCCHHHH
Confidence 47899999999999997633
No 312
>4dfc_B Uvrabc system protein A; alpha/beta domains, DNA repair, ATP binding, DNA binding, NU excision repair, hydrolase-DNA binding protein complex; 2.80A {Escherichia coli}
Probab=37.89 E-value=60 Score=18.89 Aligned_cols=47 Identities=9% Similarity=0.218 Sum_probs=30.8
Q ss_pred HHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEE
Q 042267 21 IKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINF 93 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 93 (107)
.+++.++. +++.|.++.|.-++..... -+..+..+++++.||..+++
T Consensus 9 ~qivd~il-~~~egtki~iLAPvv~~rK-------------------------g~~~~ll~~l~~~Gf~Rvrv 55 (126)
T 4dfc_B 9 SQMVDNVL-SQPEGKRLMLLAPIIKERK-------------------------GEHTKTLENLASQGYIRARI 55 (126)
T ss_dssp HHHHHHTT-SSCTTCCEEEEEEEEEEEE-------------------------SCCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHH-hCCCCCEEEEEeEEEeCCC-------------------------CcHHHHHHHHHhCCCeEEEE
Confidence 45666655 4778889888777653221 12356667777789998766
No 313
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=37.23 E-value=17 Score=25.62 Aligned_cols=34 Identities=9% Similarity=-0.069 Sum_probs=18.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.||++++.---.... ..+++.+. .|+|||.+++.
T Consensus 353 ~fD~Vv~dPPr~g~~----~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 353 GFDTVIVDPPRAGLH----PRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp TCSEEEECCCTTCSC----HHHHHHHH-HHCCSEEEEEE
T ss_pred CCCEEEEcCCccchH----HHHHHHHH-hcCCCcEEEEE
Confidence 367777733211111 13455554 48999988774
No 314
>1hwu_A PII protein; herbaspirillum seropedicae PII, beta-alpha-beta motif, signal transduction protein, signaling protein; 2.10A {Herbaspirillum seropedicae} SCOP: d.58.5.1
Probab=37.10 E-value=44 Score=18.66 Aligned_cols=26 Identities=31% Similarity=0.409 Sum_probs=20.1
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEe
Q 042267 16 DDENCIKILRNCYKALPN----DGKVLVIN 41 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p----gg~l~i~e 41 (107)
+|+.+.++++.+.++++. +|++++.+
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~~ 95 (112)
T 1hwu_A 66 DDKVVEQAVDAIIKAARTGKIGDGKIFVQE 95 (112)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 577788888888888776 48888875
No 315
>2eg2_A Nitrogen regulatory protein P-II; structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: ATP; 1.72A {Aquifex aeolicus} PDB: 2eg1_A* 2z0g_A 2pii_A 1pil_A
Probab=36.87 E-value=45 Score=18.66 Aligned_cols=26 Identities=31% Similarity=0.552 Sum_probs=19.7
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEe
Q 042267 16 DDENCIKILRNCYKALPN----DGKVLVIN 41 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p----gg~l~i~e 41 (107)
+|+++.++++.+.++++. +|++++.+
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~p 95 (112)
T 2eg2_A 66 RDEDVEKVVETIVKTAQTGRVGDGKIFIIP 95 (112)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 577778888888877764 38888876
No 316
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=36.73 E-value=45 Score=18.31 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=19.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCC-CCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPN-DGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~p-gg~l~i~e 41 (107)
.+|+++ .++.+...+++.+++. + +..++++-
T Consensus 62 ~~dlvi-------~~~~~g~~~~~~l~~~--~~~~~ii~ls 93 (137)
T 2pln_A 62 NYDLVM-------VSDKNALSFVSRIKEK--HSSIVVLVSS 93 (137)
T ss_dssp CCSEEE-------ECSTTHHHHHHHHHHH--STTSEEEEEE
T ss_pred CCCEEE-------EcCccHHHHHHHHHhc--CCCccEEEEe
Confidence 367777 3344456788888876 5 66666643
No 317
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=36.47 E-value=27 Score=21.45 Aligned_cols=56 Identities=11% Similarity=0.123 Sum_probs=33.0
Q ss_pred cCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceE
Q 042267 13 HNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGIN 92 (107)
Q Consensus 13 h~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 92 (107)
.||.......+.+++ +.+++|+.++++|.. .. .. ....++...|++.|++.+.
T Consensus 129 ~Dw~~~~~~~i~~~~-~~~~~g~IiL~Hd~~-------~~------t~-------------~al~~ii~~l~~~Gy~~v~ 181 (195)
T 2cc0_A 129 QDWNNASTDAIVQAV-SRLGNGQVILMHDWP-------AN------TL-------------AAIPRIAQTLAGKGLCSGM 181 (195)
T ss_dssp CGGGTCCHHHHHHHH-HTCCTTCEEEEESSC-------HH------HH-------------HHHHHHHHHHHHTTEEECE
T ss_pred CccCCCCHHHHHHHH-hCcCcCeEEEECCCc-------hh------HH-------------HHHHHHHHHHHHCCCEEEE
Confidence 456544456677776 457888888777521 00 00 0135667777888987765
Q ss_pred EEE
Q 042267 93 FEC 95 (107)
Q Consensus 93 ~~~ 95 (107)
+.+
T Consensus 182 l~~ 184 (195)
T 2cc0_A 182 ISP 184 (195)
T ss_dssp ECT
T ss_pred eCc
Confidence 543
No 318
>1f3m_A Serine/threonine-protein kinase PAK-alpha; kinase domain, autoinhibitory fragment, homodimer, transferase; 2.30A {Homo sapiens} SCOP: j.66.1.1 PDB: 1e0a_B* 1ees_B
Probab=35.68 E-value=20 Score=19.27 Aligned_cols=18 Identities=6% Similarity=0.089 Sum_probs=15.0
Q ss_pred HHHHHHHHHHcCCCceEE
Q 042267 76 KKEFTALAIEAGFKGINF 93 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~ 93 (107)
..+|+.+|..+|.+..++
T Consensus 31 P~eW~~ll~~sGIs~~e~ 48 (80)
T 1f3m_A 31 PEQWARLLQTSNITKSEQ 48 (80)
T ss_dssp CHHHHHHHHTSCCCHHHH
T ss_pred CHHHHHHHHHcCCCHHHH
Confidence 479999999999886554
No 319
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=35.14 E-value=46 Score=18.88 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=19.9
Q ss_pred ChHHHHHHHHHHHh-hCCC-CCEEEEEee
Q 042267 16 DDENCIKILRNCYK-ALPN-DGKVLVINS 42 (107)
Q Consensus 16 ~d~~~~~iL~~~~~-aL~p-gg~l~i~e~ 42 (107)
+|+.+.+++..+.+ ++.. +|++++.|.
T Consensus 69 ~de~vd~vv~~I~~~~~t~~~G~ifVsdV 97 (111)
T 3dfe_A 69 NREMAEKIADQVAIKFFTDYAGIIYICEA 97 (111)
T ss_dssp SHHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhCCCCEEEEEEEe
Confidence 47788899999854 5554 588888775
No 320
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=35.08 E-value=43 Score=16.89 Aligned_cols=20 Identities=15% Similarity=-0.006 Sum_probs=16.4
Q ss_pred cCHHHHHHHHHHcCCCceEE
Q 042267 74 RTKKEFTALAIEAGFKGINF 93 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~~~ 93 (107)
.+.++-+++|+++||+....
T Consensus 16 ~~~~~A~~~L~~~Gl~~~~~ 35 (71)
T 3ouv_A 16 QTVDVAQKNMNVYGFTKFSQ 35 (71)
T ss_dssp CBHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHCCCeEEEE
Confidence 57788899999999987543
No 321
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=34.39 E-value=67 Score=21.44 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=22.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVL 38 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~ 38 (107)
++|+|+++ .+......+++++...|+||..++
T Consensus 94 ~aDvVila-----vp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 94 SPDFVMLS-----SPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CCSEEEEC-----SCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred cCCEEEEe-----CCHHHHHHHHHHHhhccCCCcEEE
Confidence 35666654 455557788999999999887543
No 322
>3ce8_A Putative PII-like nitrogen regulatory protein; structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.40A {Shewanella baltica}
Probab=34.36 E-value=54 Score=19.02 Aligned_cols=26 Identities=4% Similarity=0.038 Sum_probs=20.2
Q ss_pred CChHHHHHHHHHHHhhCCCCC-EEEEE
Q 042267 15 FDDENCIKILRNCYKALPNDG-KVLVI 40 (107)
Q Consensus 15 ~~d~~~~~iL~~~~~aL~pgg-~l~i~ 40 (107)
.+|+++.+++..+.++.+.|+ +++|.
T Consensus 85 v~d~~ve~vv~aI~~~a~tg~IKIfV~ 111 (120)
T 3ce8_A 85 HPAAQQAALLTALALVCKHNPCRYWIM 111 (120)
T ss_dssp EEGGGHHHHHHHHHHHTTTSCCEEEEE
T ss_pred ECHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 357788999999999988887 55444
No 323
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=34.15 E-value=34 Score=21.89 Aligned_cols=30 Identities=7% Similarity=-0.032 Sum_probs=21.0
Q ss_pred ccCCCh---HHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 12 LHNFDD---ENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 12 lh~~~d---~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
..||.. .....+.+++.+.++||+.+++++
T Consensus 168 ~~Dw~~~~~~~~~~~~~~v~~~~~~g~Iil~Hd 200 (240)
T 1ny1_A 168 FVDWKINNQKGKKYAYDHMIKQAHPGAIYLLHT 200 (240)
T ss_dssp CSCCCGGGCCCHHHHHHHHHHTCCTTEEEEECS
T ss_pred ccccCCcCCCCHHHHHHHHHhCCCCCeEEEEcC
Confidence 356742 225678888888899988777765
No 324
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=33.79 E-value=62 Score=23.10 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=29.2
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
+||+++.=-.=....++....-++.+.++.+|+..++++|...
T Consensus 182 ~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~ 224 (443)
T 3dm5_A 182 GVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTI 224 (443)
T ss_dssp TCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGG
T ss_pred CCCEEEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCC
Confidence 4787776433222244445666788888889999999998765
No 325
>1ej5_A WAsp, wiskott-aldrich syndrome protein; alpha helix, beta-hairpin turn, blood clotting; NMR {Homo sapiens} SCOP: a.68.1.1 PDB: 1t84_A* 2k42_A
Probab=33.34 E-value=26 Score=19.99 Aligned_cols=18 Identities=17% Similarity=0.316 Sum_probs=14.6
Q ss_pred HHHHHHHHHHcCCCceEE
Q 042267 76 KKEFTALAIEAGFKGINF 93 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~ 93 (107)
..+|+++|+.+|.+..++
T Consensus 23 ppeWk~LL~~aGITe~el 40 (107)
T 1ej5_A 23 DPDLRSLFSRAGISEAQL 40 (107)
T ss_dssp CHHHHHHHHHTTCCHHHH
T ss_pred CHHHHHHHHHcCCCHHHH
Confidence 479999999999886543
No 326
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=33.24 E-value=22 Score=26.67 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=24.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKV 37 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l 37 (107)
.+|+++.-++=.....|-...+|-...+-|+|||.+
T Consensus 428 KVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 428 KADIIVSELLGSFADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp CEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred ccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEE
Confidence 478888776544444444556777777889999875
No 327
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=33.12 E-value=25 Score=24.45 Aligned_cols=41 Identities=12% Similarity=0.096 Sum_probs=24.7
Q ss_pred ceeEEEecccccC-CC-hHHHHHHHHHHHhhCCC--CCEEEEEee
Q 042267 2 QVYLSILQWMLHN-FD-DENCIKILRNCYKALPN--DGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~-~~-d~~~~~iL~~~~~aL~p--gg~l~i~e~ 42 (107)
.||+|++.--.+. .. +++...+.+.+.+.|++ ||++.++-.
T Consensus 307 ~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 307 EYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp CSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 4788877633321 22 24456666666666655 899888653
No 328
>2g7j_A Putative cytoplasmic protein; STR72, autostructure, structural genomics, PSI, protein STRU initiative; NMR {Salmonella typhimurium} SCOP: d.198.5.1
Probab=32.93 E-value=42 Score=19.31 Aligned_cols=21 Identities=19% Similarity=0.121 Sum_probs=17.1
Q ss_pred CHHHHHHHHHHcCCCceEEEE
Q 042267 75 TKKEFTALAIEAGFKGINFEC 95 (107)
Q Consensus 75 t~~e~~~ll~~aGf~~~~~~~ 95 (107)
...|..+.|+++||+..-+..
T Consensus 4 RPDEVArVLEk~GF~~D~vt~ 24 (124)
T 2g7j_A 4 RPDEVARVLEKAGFTVDVVTN 24 (124)
T ss_dssp CHHHHHHHHHHTTCEEEEEET
T ss_pred ChHHHHHHHHHcCceEEEeec
Confidence 357899999999999876653
No 329
>1x8d_A Hypothetical protein YIIL; mutarotase, L-rhamnose, biosynthetic protein; HET: RNS; 1.80A {Escherichia coli} SCOP: d.58.4.21
Probab=32.56 E-value=67 Score=17.97 Aligned_cols=29 Identities=14% Similarity=0.084 Sum_probs=23.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCC---ceeEEEE
Q 042267 77 KEFTALAIEAGFKGINFECNVC---NSYVMEF 105 (107)
Q Consensus 77 ~e~~~ll~~aGf~~~~~~~~~~---~~~vi~~ 105 (107)
-|+.+.|+++|....++...+. .+.++|+
T Consensus 27 PEv~~~L~~aGi~~ysIfl~~~~~~LF~~~E~ 58 (104)
T 1x8d_A 27 PELEAVLKSHGAHNYAIYLDKARNLLFAMVEI 58 (104)
T ss_dssp HHHHHHHHHTTEEEEEEEEETTTTEEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEEECCCCeEEEEEEE
Confidence 6889999999999999987653 4677765
No 330
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=32.29 E-value=11 Score=25.90 Aligned_cols=18 Identities=17% Similarity=0.122 Sum_probs=10.5
Q ss_pred HHHHHhhCCCCCEEEEEe
Q 042267 24 LRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 24 L~~~~~aL~pgg~l~i~e 41 (107)
.+++.+.|+++|+++.+.
T Consensus 309 ~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 309 DSETEKMVQAYPRILYIS 326 (369)
T ss_dssp CHHHHHHHTTSSEEEEEE
T ss_pred HHHHHHHHhCCCEEEEEE
Confidence 344455555777776654
No 331
>2gw8_A PII signal transduction protein; transcriptional regulation, neisse structural genomics, oxford protein production facility; 1.85A {Neisseria meningitidis}
Probab=32.29 E-value=45 Score=18.76 Aligned_cols=27 Identities=19% Similarity=0.348 Sum_probs=19.7
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 042267 16 DDENCIKILRNCYKALPN----DGKVLVINS 42 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p----gg~l~i~e~ 42 (107)
+|+++.++++.+.++++. +|++++.+-
T Consensus 68 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 2gw8_A 68 ADDAVERAIDVIVEVARSGKIGDGKIFVLPV 98 (114)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 566677888888877764 388888763
No 332
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.92 E-value=17 Score=20.49 Aligned_cols=19 Identities=16% Similarity=0.331 Sum_probs=16.0
Q ss_pred cCHHHHHHHHHHcCCCceE
Q 042267 74 RTKKEFTALAIEAGFKGIN 92 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~~ 92 (107)
-+.+|.++||..-||+..-
T Consensus 34 Ssp~EV~~WL~~kgFS~~t 52 (99)
T 2e8m_A 34 STPEDVKTWLQSKGFNPVT 52 (99)
T ss_dssp CCTTHHHHHHHHHTCCHHH
T ss_pred CCHHHHHHHHHHcCCCHHH
Confidence 4678999999999999753
No 333
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=31.47 E-value=25 Score=22.86 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=21.7
Q ss_pred ceeEEEecccccC--------CCh----HHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHN--------FDD----ENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~--------~~d----~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
+||+|++.++=.. |.+ ++..+.|++..+. ||-++++
T Consensus 77 ~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~~---GGgll~i 124 (256)
T 2gk3_A 77 RYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKN---GGGLLMI 124 (256)
T ss_dssp TCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHT---TCEEEEE
T ss_pred cCCEEEEeCCchhhcccccccccccccChHHHHHHHHHHHh---CCEEEEE
Confidence 5899998875321 221 3345666666663 7777666
No 334
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=31.46 E-value=36 Score=24.89 Aligned_cols=20 Identities=20% Similarity=0.381 Sum_probs=17.4
Q ss_pred HHHHHHHhhCC-CCCEEEEEe
Q 042267 22 KILRNCYKALP-NDGKVLVIN 41 (107)
Q Consensus 22 ~iL~~~~~aL~-pgg~l~i~e 41 (107)
.+++++.+.|+ |||++.++=
T Consensus 338 ~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 338 AFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp HHHHHHHHTBCTTTCEEEEEE
T ss_pred HHHHHHHHHhCCCceeEEEEe
Confidence 58999999999 999998753
No 335
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=31.31 E-value=19 Score=20.08 Aligned_cols=20 Identities=10% Similarity=0.062 Sum_probs=16.8
Q ss_pred eecCHHHHHHHHHHcCCCce
Q 042267 72 RERTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 72 ~~rt~~e~~~ll~~aGf~~~ 91 (107)
...|.+++..||++.||..+
T Consensus 18 ~~Ws~edV~~WL~~~Gl~~Y 37 (97)
T 2d8c_A 18 VYWSPKKVADWLLENAMPEY 37 (97)
T ss_dssp SSCCTTHHHHHHHHTTCTTT
T ss_pred hhCCHHHHHHHHHHcCCHHH
Confidence 35688999999999999864
No 336
>3rhf_A Putative polyphosphate kinase 2 family protein; PSI-biology, MCSG, structural genomics, midwest center for S genomics; HET: PGE FLC PG4; 2.45A {Arthrobacter aurescens}
Probab=31.18 E-value=13 Score=25.05 Aligned_cols=68 Identities=16% Similarity=0.077 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEEE
Q 042267 20 CIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFE 94 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 94 (107)
..-.|.+..+.|++.|.+.|.|--..+... .. ...+...-... ........++++.|.+.|..++++.
T Consensus 118 ~~~ylwR~~~~lP~~G~I~IFdRSwY~~vl---ve---rV~g~~~~~~~-~~~~~~I~~FE~~L~~~G~~ilKf~ 185 (289)
T 3rhf_A 118 SHDFLWRIEKQVPAAGMVGVFDRSQYEDVL---IH---RVHGWADAAEL-ERRYAAINDFESRLTEQGTTIVKVM 185 (289)
T ss_dssp TSCTTHHHHTTCCCTTCEEEEESCGGGGGT---HH---HHTTSSCHHHH-HHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred cCCHHHHHHHhCCCCCeEEEEeCchhhhHh---HH---HHhcCCCHHHH-HHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 344577777777777777777654332211 00 00000000000 0112345788888888887777764
No 337
>1lfp_A Hypothetical protein AQ_1575; NEW fold, thermostability, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 1.72A {Aquifex aeolicus} SCOP: e.39.1.1
Probab=31.18 E-value=81 Score=20.78 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=21.3
Q ss_pred CCChHHHHHHHHHHHhhC-------------CCCCEEEEEeeeCC
Q 042267 14 NFDDENCIKILRNCYKAL-------------PNDGKVLVINSTLP 45 (107)
Q Consensus 14 ~~~d~~~~~iL~~~~~aL-------------~pgg~l~i~e~~~~ 45 (107)
+.|.+-..+.+++....+ .|||.-+|+|...+
T Consensus 60 nmPkd~IerAIkk~~G~~~~~~~eei~YEgyGPgGvaiiVe~lTD 104 (249)
T 1lfp_A 60 NMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTD 104 (249)
T ss_dssp TCCHHHHHHHHHHHHSCSSSCCCEEEEEEEEETTTEEEEEEEEES
T ss_pred CCCHHHHHHHHHHhcCCCcccceEEEEEEEECCCceEEEEEEecC
Confidence 345555666666665432 28999999997754
No 338
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=30.93 E-value=60 Score=17.41 Aligned_cols=23 Identities=30% Similarity=0.200 Sum_probs=16.7
Q ss_pred cCHHHHHHHHH----HcCCCceEEEEc
Q 042267 74 RTKKEFTALAI----EAGFKGINFECN 96 (107)
Q Consensus 74 rt~~e~~~ll~----~aGf~~~~~~~~ 96 (107)
++.+|-..+.+ ++||.+.++.|.
T Consensus 54 ~sLdEAlE~AE~eYeeaGF~V~RVRPe 80 (84)
T 2lmc_A 54 ETLDEALELAEWQYVPAGFEVTRVRPC 80 (84)
T ss_dssp SSHHHHHHHHHHTTGGGTCEEEEEEEE
T ss_pred ccHHHHHHHHHHHhhhccceEEEeccc
Confidence 55666555555 789999998875
No 339
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=30.57 E-value=36 Score=20.49 Aligned_cols=20 Identities=30% Similarity=0.300 Sum_probs=13.7
Q ss_pred eecCHHHHHHHHHHcCCCce
Q 042267 72 RERTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 72 ~~rt~~e~~~ll~~aGf~~~ 91 (107)
...|.+|+.+.|++.||.+.
T Consensus 18 ~~~tq~eL~~~L~~~G~~Vt 37 (149)
T 1b4a_A 18 DIETQDELVDRLREAGFNVT 37 (149)
T ss_dssp CCCSHHHHHHHHHHTTCCCC
T ss_pred CCccHHHHHHHHHHcCCCcC
Confidence 34677777777777777643
No 340
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=30.42 E-value=73 Score=22.60 Aligned_cols=43 Identities=16% Similarity=0.339 Sum_probs=28.9
Q ss_pred ceeEEEecccccCC--ChHHHHHHHHHHHhhCCCCCEEEEEeeeC
Q 042267 2 QVYLSILQWMLHNF--DDENCIKILRNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 2 ~~D~v~~~~vlh~~--~d~~~~~iL~~~~~aL~pgg~l~i~e~~~ 44 (107)
++|++++=-.=... .|+....-++.+.++++|...++++|...
T Consensus 179 ~~DvvIIDTaGr~~~~~d~~lm~el~~i~~~~~pd~vlLVlDa~~ 223 (433)
T 3kl4_A 179 KMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASI 223 (433)
T ss_dssp TCSEEEEEECCCSSSCCTTHHHHHHHHHHHHHCCSEEEEEEEGGG
T ss_pred CCCEEEEECCCCccccCCHHHHHHHHHHHHhhCCcceEEEEeCcc
Confidence 46777654332222 45555666777888889999999988765
No 341
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=30.08 E-value=32 Score=22.20 Aligned_cols=30 Identities=7% Similarity=0.049 Sum_probs=11.0
Q ss_pred ccCCCh---HHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 12 LHNFDD---ENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 12 lh~~~d---~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
..||.. .....+.+++.+.++||+.+++++
T Consensus 180 ~~Dw~~~~~~~~~~~~~~v~~~~~~G~IiL~Hd 212 (247)
T 2j13_A 180 FLDWKVDEQRGWQYAHNNVMTMIHPGSILLLHA 212 (247)
T ss_dssp CCCC------------------CCTTBEEEECC
T ss_pred cCcCCCCCCCCHHHHHHHHHHhcCCCeEEEEeC
Confidence 456642 123457788888888998777765
No 342
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=30.01 E-value=37 Score=15.73 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=13.3
Q ss_pred CHHHHHHHHHHcCCCc
Q 042267 75 TKKEFTALAIEAGFKG 90 (107)
Q Consensus 75 t~~e~~~ll~~aGf~~ 90 (107)
+.+++.+.++++||+.
T Consensus 50 ~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 50 TQDLIKEALLDAGQEV 65 (66)
T ss_dssp CHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHcCCCc
Confidence 6678888899999875
No 343
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=29.89 E-value=17 Score=26.61 Aligned_cols=19 Identities=11% Similarity=0.193 Sum_probs=17.2
Q ss_pred HHHHHHHhhCCCCCEEEEE
Q 042267 22 KILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 22 ~iL~~~~~aL~pgg~l~i~ 40 (107)
.+++++.+.|+|||++.++
T Consensus 376 ~Fl~~~l~~Lk~gGr~aiV 394 (544)
T 3khk_A 376 AWMLHMLYHLAPTGSMALL 394 (544)
T ss_dssp HHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHhccCceEEEE
Confidence 6899999999999999886
No 344
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=29.67 E-value=41 Score=17.45 Aligned_cols=18 Identities=6% Similarity=-0.136 Sum_probs=13.9
Q ss_pred cCHHHHHHHHHHcCCCce
Q 042267 74 RTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~ 91 (107)
.|.++..+||+..||..+
T Consensus 5 Ws~~~V~~WL~~lgl~~Y 22 (76)
T 2f3n_A 5 WSKFDVGDWLESIHLGEH 22 (76)
T ss_dssp CCHHHHHHHHHHTTCGGG
T ss_pred CCHHHHHHHHHHCCCHHH
Confidence 567888888888888754
No 345
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=29.64 E-value=66 Score=16.89 Aligned_cols=53 Identities=11% Similarity=0.187 Sum_probs=33.0
Q ss_pred HHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceEEEEcCCc
Q 042267 20 CIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCN 99 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~ 99 (107)
..-.+++..+.|++|..|.|. .++ +. +.+.+.+|+++.|++........+.
T Consensus 23 Pvl~~kkal~~l~~G~~l~V~---~dd-~~-------------------------a~~di~~~~~~~G~~~~~~~~~~~~ 73 (82)
T 3lvj_C 23 PVMMVRKTVRNMQPGETLLII---ADD-PA-------------------------TTRDIPGFCTFMEHELVAKETDGLP 73 (82)
T ss_dssp HHHHHHHHHHTSCTTCEEEEE---ECC-TT-------------------------HHHHHHHHHHHTTCEEEEEECSSSS
T ss_pred HHHHHHHHHHhCCCCCEEEEE---ECC-cc-------------------------HHHHHHHHHHHCCCEEEEEEecCCE
Confidence 344566666778888877553 221 11 2357788899999998776544444
Q ss_pred ee
Q 042267 100 SY 101 (107)
Q Consensus 100 ~~ 101 (107)
+.
T Consensus 74 ~~ 75 (82)
T 3lvj_C 74 YR 75 (82)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 346
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=29.56 E-value=58 Score=17.49 Aligned_cols=26 Identities=12% Similarity=0.147 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCcee
Q 042267 76 KKEFTALAIEAGFKGINFECNVCNSY 101 (107)
Q Consensus 76 ~~e~~~ll~~aGf~~~~~~~~~~~~~ 101 (107)
.+.+.+|+++.|++........+.+.
T Consensus 42 ~~dI~~~~~~~G~~v~~~~~~~g~~~ 67 (87)
T 3hz7_A 42 RQNLQKMAEGMGYQSEYLEKDNGVIE 67 (87)
T ss_dssp HHHHHHHHHHHTCEEEEEECGGGCEE
T ss_pred HHHHHHHHHHCCCEEEEEEecCCEEE
Confidence 46778889999998876543444333
No 347
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=29.53 E-value=1.1e+02 Score=19.51 Aligned_cols=33 Identities=15% Similarity=0.059 Sum_probs=22.0
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
++|++++. .+......+++.+...++++..++.
T Consensus 62 ~aDvVila-----vp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 62 SPDFVMLS-----SPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CCSEEEEC-----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEc-----CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 35555553 4555667888888888988875443
No 348
>2o66_A PII protein; regulation of nitrogen and carbon metabolism, biosynthetic protein; HET: FLC; 1.90A {Arabidopsis thaliana} PDB: 2o67_A 2rd5_C*
Probab=29.40 E-value=52 Score=19.35 Aligned_cols=27 Identities=15% Similarity=0.380 Sum_probs=20.9
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEee
Q 042267 16 DDENCIKILRNCYKALPN----DGKVLVINS 42 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p----gg~l~i~e~ 42 (107)
+|+.+.++++.+.++++. +|++++.+.
T Consensus 79 ~de~ve~Vv~~I~~~~~tg~~GdGkIFV~pV 109 (135)
T 2o66_A 79 KKDQVESVINTIIEGARTGEIGDGKIFVLPV 109 (135)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 567788888888888875 389988864
No 349
>3bzq_A Nitrogen regulatory protein P-II; GLNB, GLNK, signal transdu protein, nucleotide-binding, transcription; 1.40A {Mycobacterium tuberculosis H37RV} PDB: 3lf0_A*
Probab=29.35 E-value=43 Score=18.80 Aligned_cols=26 Identities=35% Similarity=0.397 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHhhCCC----CCEEEEEe
Q 042267 16 DDENCIKILRNCYKALPN----DGKVLVIN 41 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p----gg~l~i~e 41 (107)
+|+.+.++++.+.++++. +|++++.+
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~p 97 (114)
T 3bzq_A 68 DDSIVDKVVDSIVRAARTGKIGDGKVWVSP 97 (114)
T ss_dssp ETTTHHHHHHHHHHHHCCSSTTCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 456677777777777765 48888876
No 350
>2j9c_A GLNK1, hypothetical nitrogen regulatory PII-like protein MJ0059; EM single particle, nitrogen metabolism, signalling, transcription; HET: ATP; 1.30A {Methanococcus jannaschii} PDB: 2j9d_A* 2j9e_A* 2j9d_E*
Probab=29.09 E-value=47 Score=18.90 Aligned_cols=27 Identities=19% Similarity=0.335 Sum_probs=19.6
Q ss_pred ChHHHHHHHHHHHhhCCC---C-CEEEEEee
Q 042267 16 DDENCIKILRNCYKALPN---D-GKVLVINS 42 (107)
Q Consensus 16 ~d~~~~~iL~~~~~aL~p---g-g~l~i~e~ 42 (107)
+|+.+.++++.+.++++. | |++++.+-
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (119)
T 2j9c_A 68 KEEDVDNVIDIICENARTGNPGDGKIFVIPV 98 (119)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 566677888888877764 4 88888763
No 351
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=28.49 E-value=98 Score=18.52 Aligned_cols=26 Identities=0% Similarity=-0.150 Sum_probs=17.1
Q ss_pred ceeEEEecccccCCCh-HHHHHHHHHH
Q 042267 2 QVYLSILQWMLHNFDD-ENCIKILRNC 27 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d-~~~~~iL~~~ 27 (107)
+||.+++..-.+.+.- .....+|+++
T Consensus 87 ~yD~iilg~Pvy~g~~~~~~~~fl~~~ 113 (171)
T 4ici_A 87 TYDVVFIGYPIWWDLAPRIINTFIEGH 113 (171)
T ss_dssp GCSEEEEEEECBTTBCCHHHHHHHHHS
T ss_pred HCCEEEEecccccCCchHHHHHHHHHc
Confidence 5898888887776653 3355556554
No 352
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=28.38 E-value=65 Score=17.77 Aligned_cols=26 Identities=8% Similarity=0.042 Sum_probs=18.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCceeE
Q 042267 77 KEFTALAIEAGFKGINFECNVCNSYV 102 (107)
Q Consensus 77 ~e~~~ll~~aGf~~~~~~~~~~~~~v 102 (107)
+.+.+|+++.|++.......++.+.+
T Consensus 68 ~dIp~~~~~~G~~v~~~e~~~~~~~i 93 (97)
T 1je3_A 68 NNIPLDARNHGYTVLDIQQDGPTIRY 93 (97)
T ss_dssp CHHHHHHHHHTCSEEEEEECSSSEEE
T ss_pred HHHHHHHHHCCCEEEEEEeeCCEEEE
Confidence 46778899999998876555444433
No 353
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=28.16 E-value=53 Score=25.78 Aligned_cols=21 Identities=10% Similarity=0.028 Sum_probs=17.5
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 042267 21 IKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~i~e 41 (107)
..+++++.+.|+|||++.++=
T Consensus 445 ~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 445 ALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp HHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEE
Confidence 347889999999999998754
No 354
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=28.15 E-value=16 Score=22.20 Aligned_cols=22 Identities=9% Similarity=0.302 Sum_probs=17.5
Q ss_pred HHHHHHHhhCCCCCEEEEEeee
Q 042267 22 KILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 22 ~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
..++.+.+.|+|||+++++-..
T Consensus 118 ~~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 118 EAIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp HHHHHHHHTEEEEEEEEECSCG
T ss_pred HHHHHHHHHhccCCEEEEEcCC
Confidence 3578888999999999887543
No 355
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=27.74 E-value=30 Score=24.58 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=20.9
Q ss_pred CCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 14 NFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 14 ~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
||.......+++++.+.++||+.++++|
T Consensus 359 Dw~~~~~~~i~~~v~~~~~~G~IIL~HD 386 (431)
T 2c1i_A 359 DWKSKNEASILTEIQHQVANGSIVLMHD 386 (431)
T ss_dssp HHHHCCHHHHHHHHHHHCCTTEEEEEET
T ss_pred ccccCCHHHHHHHHHHhccCCCEEEECC
Confidence 4543345678899998899998887775
No 356
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=27.69 E-value=1.1e+02 Score=19.73 Aligned_cols=37 Identities=11% Similarity=0.095 Sum_probs=20.1
Q ss_pred ceeEEEec-c-cccCCChHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQ-W-MLHNFDDENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~-~-vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
+||++++. + .-..++++... .+.+.++.||-++.+..
T Consensus 67 ~~DvvV~~~~~~~~~l~~~~~~----al~~~V~~GgG~vgiH~ 105 (252)
T 1t0b_A 67 RCDVLVWWGHIAHDEVKDEVVE----RVHRRVLEGMGLIVLHS 105 (252)
T ss_dssp TCSEEEEECSSCGGGSCHHHHH----HHHHHHHTTCEEEEEGG
T ss_pred cCCEEEEecCCCCCcCCHHHHH----HHHHHHHcCCCEEEEcc
Confidence 58998862 1 22345555433 33334445877777643
No 357
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=27.52 E-value=43 Score=22.69 Aligned_cols=20 Identities=15% Similarity=0.253 Sum_probs=17.3
Q ss_pred HHHHHHHhhCCCCCEEEEEe
Q 042267 22 KILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 22 ~iL~~~~~aL~pgg~l~i~e 41 (107)
..++.+.++|+|+|+++++.
T Consensus 251 ~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 251 KHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp HHHHHHHHHSCTTCEEEECS
T ss_pred hhHHHHHHHhcCCCEEEEEC
Confidence 57888999999999999873
No 358
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=27.38 E-value=46 Score=17.46 Aligned_cols=19 Identities=11% Similarity=-0.081 Sum_probs=14.5
Q ss_pred ecCHHHHHHHHHHcCCCce
Q 042267 73 ERTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 73 ~rt~~e~~~ll~~aGf~~~ 91 (107)
..|.+++.+||+..||..+
T Consensus 9 ~Ws~~~V~~WL~~lgl~~Y 27 (81)
T 3bq7_A 9 LWGTEEVAAWLEHLSLCEY 27 (81)
T ss_dssp GCCHHHHHHHHHHTTCGGG
T ss_pred hCCHHHHHHHHHHCCCHHH
Confidence 3577888888888888764
No 359
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=27.04 E-value=18 Score=23.78 Aligned_cols=26 Identities=23% Similarity=0.218 Sum_probs=19.5
Q ss_pred CceeEEEecccccCCChHHHHHHHHHHH
Q 042267 1 MQVYLSILQWMLHNFDDENCIKILRNCY 28 (107)
Q Consensus 1 ~~~D~v~~~~vlh~~~d~~~~~iL~~~~ 28 (107)
|+||++.+.| |.|+..+...++++..
T Consensus 56 ~G~D~~T~GN--HefD~~~l~~~l~~~~ 81 (252)
T 2z06_A 56 AGVDLVSLGN--HAWDHKEVYALLESEP 81 (252)
T ss_dssp HTCCEEECCT--TTTSCTTHHHHHHHSS
T ss_pred CCCCEEEecc--EeeECchHHHHhccCC
Confidence 4789988876 7888777777777654
No 360
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=26.62 E-value=67 Score=15.98 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=18.7
Q ss_pred CceecCHHHHHHHHHHcCCCce
Q 042267 70 HGRERTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 70 ~g~~rt~~e~~~ll~~aGf~~~ 91 (107)
+|...|.+.+.++++.+|-++.
T Consensus 13 ~g~~~t~~~I~~il~aaGveve 34 (58)
T 3a1y_A 13 VGKEINEENLKAVLQAAGVEPE 34 (58)
T ss_dssp TTCCCCHHHHHHHHHHTTCCCC
T ss_pred CCCCCCHHHHHHHHHHcCCCcc
Confidence 5678999999999999996654
No 361
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=26.51 E-value=31 Score=14.07 Aligned_cols=16 Identities=25% Similarity=0.225 Sum_probs=9.3
Q ss_pred HHHHHHHHHHhhCCCC
Q 042267 19 NCIKILRNCYKALPND 34 (107)
Q Consensus 19 ~~~~iL~~~~~aL~pg 34 (107)
+...-|+++++.|+.|
T Consensus 12 dlqerlrklrkklrsg 27 (27)
T 3twe_A 12 DLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhcCC
Confidence 3455677777666544
No 362
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=26.41 E-value=41 Score=20.91 Aligned_cols=20 Identities=10% Similarity=0.213 Sum_probs=14.2
Q ss_pred HHHHhhCCCCCEEEEEeeeC
Q 042267 25 RNCYKALPNDGKVLVINSTL 44 (107)
Q Consensus 25 ~~~~~aL~pgg~l~i~e~~~ 44 (107)
.+....|+|||.+++.....
T Consensus 83 ~~~~~~l~~gg~vi~ns~~~ 102 (194)
T 3g2e_A 83 KGFRGGVKEGGIIVVEPNLV 102 (194)
T ss_dssp HHHGGGEEEEEEEEECTTTC
T ss_pred HHHHhccCCCeEEEEeCCCC
Confidence 45677899999887755443
No 363
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=26.26 E-value=84 Score=16.94 Aligned_cols=18 Identities=11% Similarity=0.305 Sum_probs=7.3
Q ss_pred HHHHHHHHhhCCCCCEEE
Q 042267 21 IKILRNCYKALPNDGKVL 38 (107)
Q Consensus 21 ~~iL~~~~~aL~pgg~l~ 38 (107)
..+++++++...+...++
T Consensus 64 ~~~~~~l~~~~~~~~~ii 81 (130)
T 1dz3_A 64 LAVLERIRAGFEHQPNVI 81 (130)
T ss_dssp HHHHHHHHHHCSSCCEEE
T ss_pred HHHHHHHHhcCCCCCcEE
Confidence 344444444323333333
No 364
>3hjh_A Transcription-repair-coupling factor; MFD, mutation frequency decline, ATP-binding, DNA DAMA repair, DNA-binding, helicase, hydrolase; 1.95A {Escherichia coli} PDB: 2b2n_A* 4dfc_A
Probab=26.20 E-value=31 Score=24.82 Aligned_cols=31 Identities=10% Similarity=0.204 Sum_probs=25.0
Q ss_pred CceecCHHHHHHHHHHcCCCceEEEEcCCce
Q 042267 70 HGRERTKKEFTALAIEAGFKGINFECNVCNS 100 (107)
Q Consensus 70 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~ 100 (107)
-|...+.+++.+.|.+.||+.++....+|.+
T Consensus 132 ~G~~~~~~~l~~~L~~~GY~r~~~V~~~Gef 162 (483)
T 3hjh_A 132 KGQRLSRDALRTQLDSAGYRHVDQVMEHGEY 162 (483)
T ss_dssp TTCCCCHHHHHHHHHHTTCEECSSCCSTTEE
T ss_pred CCCCcCHHHHHHHHHHcCCeeccccCCceEE
Confidence 5778899999999999999987765555544
No 365
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A
Probab=25.67 E-value=64 Score=20.40 Aligned_cols=21 Identities=29% Similarity=0.355 Sum_probs=16.6
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 042267 20 CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~ 40 (107)
...++.|+.+++++||.+-|.
T Consensus 151 l~NLl~NA~~a~~~gg~I~v~ 171 (247)
T 4fpp_A 151 VLNIAQIAASALPAGGVATVK 171 (247)
T ss_dssp HHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHHHHHHHHhcCCCCeEEEE
Confidence 456788888999999987664
No 366
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=25.61 E-value=1.1e+02 Score=20.79 Aligned_cols=34 Identities=3% Similarity=-0.070 Sum_probs=24.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
++|++++. .+......+++.+...++|+..++.+
T Consensus 99 ~aDvVila-----Vp~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 99 GVTDILIV-----VPSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp TCCEEEEC-----CCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred cCCEEEEC-----CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 35666654 46667888999999999988766543
No 367
>3on3_A Keto/oxoacid ferredoxin oxidoreductase, gamma SUB; structural genomics, PSI-2, protein structure initiative; 2.19A {Geobacter sulfurreducens}
Probab=25.56 E-value=52 Score=20.16 Aligned_cols=22 Identities=18% Similarity=0.193 Sum_probs=15.8
Q ss_pred HHHHHhhCCCCCEEEEEeeeCC
Q 042267 24 LRNCYKALPNDGKVLVINSTLP 45 (107)
Q Consensus 24 L~~~~~aL~pgg~l~i~e~~~~ 45 (107)
+.+....|+|||.+++-....+
T Consensus 82 ~~~~~~~l~~gg~vi~ns~~~~ 103 (183)
T 3on3_A 82 CDKYSADLKEGGVLLVDSDLVT 103 (183)
T ss_dssp HHHSTTTSCTTCEEEEETTTCC
T ss_pred HHHHHhccCCCeEEEEeCCCCC
Confidence 3456678999999988655443
No 368
>2ibg_E Protein hedgehog, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: d.65.1.2
Probab=25.54 E-value=1.2e+02 Score=18.41 Aligned_cols=57 Identities=18% Similarity=0.112 Sum_probs=32.6
Q ss_pred CCCCCEEEEEeeeCCCCCCCch-hhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCce
Q 042267 31 LPNDGKVLVINSTLPEVPDSTE-ASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 31 L~pgg~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 91 (107)
.-||.+|-|.|...++....++ +.-.++..|++. ++...-....+.++..+|||-=+
T Consensus 78 ~w~gv~lrVteawd~~~~~~~~SLHyeGRAvdit~----sd~d~~k~g~La~lAv~aGFDwV 135 (150)
T 2ibg_E 78 EWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIAT----SDRDQSKYGMLARLAVEAGFDWV 135 (150)
T ss_dssp HSTTCCEEEEESSCSSCCSCSCCGGGGTCEEEEEE----TTCCGGGHHHHHHHHHHHTCSEE
T ss_pred HcCCceEEEEEcccCCCCCCCccccccceeEEEEe----cCCChHHHHHHHHHHHHcCCCEE
Confidence 3478999999987654322111 111234555442 13222234567788889999876
No 369
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=25.02 E-value=51 Score=22.15 Aligned_cols=21 Identities=10% Similarity=0.188 Sum_probs=17.2
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 042267 22 KILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 22 ~iL~~~~~aL~pgg~l~i~e~ 42 (107)
..++.+.++|+|||+++++-.
T Consensus 254 ~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 254 ASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHHHHHHHSCTTCEEEECSC
T ss_pred HHHHHHHHHhcCCCEEEEEec
Confidence 457788899999999988753
No 370
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=24.76 E-value=31 Score=23.02 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=17.9
Q ss_pred HHHHHHHHHhhCCCCCEEEEEe
Q 042267 20 CIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~e 41 (107)
....|..+.+.|+|||.+++=|
T Consensus 223 ~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 223 TWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp HHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHHHHHhhcCCCEEEEEcC
Confidence 5678999999999999775533
No 371
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=24.31 E-value=53 Score=22.05 Aligned_cols=21 Identities=29% Similarity=0.305 Sum_probs=17.5
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 042267 22 KILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 22 ~iL~~~~~aL~pgg~l~i~e~ 42 (107)
..++.+.+.|++||+++++-.
T Consensus 264 ~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 264 SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHHHHHHHHSCTTCEEEECCC
T ss_pred HHHHHHHHHhcCCCEEEEEcc
Confidence 467888899999999998754
No 372
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=24.18 E-value=1e+02 Score=17.19 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=21.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.+|++++-..+.+.+ ...+++.+++. .|...++++
T Consensus 61 ~~dlii~d~~l~~~~---g~~~~~~l~~~-~~~~~ii~~ 95 (152)
T 3eul_A 61 LPDVALLDYRMPGMD---GAQVAAAVRSY-ELPTRVLLI 95 (152)
T ss_dssp CCSEEEEETTCSSSC---HHHHHHHHHHT-TCSCEEEEE
T ss_pred CCCEEEEeCCCCCCC---HHHHHHHHHhc-CCCCeEEEE
Confidence 467888777665444 45677777664 456566554
No 373
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=24.05 E-value=1.3e+02 Score=19.89 Aligned_cols=42 Identities=21% Similarity=0.457 Sum_probs=24.2
Q ss_pred ceeEEEeccc-ccCC-ChHHHHHHHHHHHhhCCCCCEEEEEeee
Q 042267 2 QVYLSILQWM-LHNF-DDENCIKILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 2 ~~D~v~~~~v-lh~~-~d~~~~~iL~~~~~aL~pgg~l~i~e~~ 43 (107)
+||++++=-. .++. .++....-|+++..++.++..+++++..
T Consensus 180 ~~D~ViIDTpg~~~~~~~~~l~~el~~i~~~~~~d~vllVvda~ 223 (297)
T 1j8m_F 180 KMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDAS 223 (297)
T ss_dssp TCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGG
T ss_pred CCCEEEEeCCCCcccccHHHHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4566555332 1111 2322344466677778889999888865
No 374
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=23.93 E-value=1.2e+02 Score=19.81 Aligned_cols=32 Identities=6% Similarity=0.008 Sum_probs=21.8
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVL 38 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~ 38 (107)
++|+|++. .+......+++.+...|+|+..++
T Consensus 65 ~aDvVila-----vp~~~~~~vl~~l~~~l~~~~iv~ 96 (298)
T 2pv7_A 65 NADVVIVS-----VPINLTLETIERLKPYLTENMLLA 96 (298)
T ss_dssp TCSEEEEC-----SCGGGHHHHHHHHGGGCCTTSEEE
T ss_pred CCCEEEEe-----CCHHHHHHHHHHHHhhcCCCcEEE
Confidence 35666654 355557788888888888876443
No 375
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=23.70 E-value=91 Score=20.71 Aligned_cols=34 Identities=12% Similarity=0.042 Sum_probs=23.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
++|++++. .++.....+++.+...++|+..++.+
T Consensus 90 ~aD~Vila-----v~~~~~~~v~~~i~~~l~~~~ivv~~ 123 (354)
T 1x0v_A 90 DADILIFV-----VPHQFIGKICDQLKGHLKANATGISL 123 (354)
T ss_dssp TCSEEEEC-----CCGGGHHHHHHHHTTCSCTTCEEEEC
T ss_pred CCCEEEEe-----CCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 35666665 34555778888888888888765543
No 376
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=23.24 E-value=1e+02 Score=16.87 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=21.4
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.+|++++-..+.+.+ ...+++.+++. .|+-.++++
T Consensus 49 ~~dlvi~d~~l~~~~---g~~~~~~l~~~-~~~~~ii~l 83 (143)
T 3jte_A 49 SIDVVITDMKMPKLS---GMDILREIKKI-TPHMAVIIL 83 (143)
T ss_dssp TCCEEEEESCCSSSC---HHHHHHHHHHH-CTTCEEEEE
T ss_pred CCCEEEEeCCCCCCc---HHHHHHHHHHh-CCCCeEEEE
Confidence 468888776665444 35666666664 455555554
No 377
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=23.15 E-value=50 Score=15.16 Aligned_cols=17 Identities=12% Similarity=0.231 Sum_probs=12.9
Q ss_pred cCHHHHHHHHHHcCCCc
Q 042267 74 RTKKEFTALAIEAGFKG 90 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~ 90 (107)
.+.+++.+.++.+||..
T Consensus 51 ~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 51 VSVKDIADAIEDQGYDV 67 (69)
T ss_dssp CCHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHcCCCc
Confidence 35677888888999864
No 378
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=23.07 E-value=18 Score=23.88 Aligned_cols=26 Identities=12% Similarity=0.038 Sum_probs=19.7
Q ss_pred CceeEEEecccccCCChHHHHHHHHHHH
Q 042267 1 MQVYLSILQWMLHNFDDENCIKILRNCY 28 (107)
Q Consensus 1 ~~~D~v~~~~vlh~~~d~~~~~iL~~~~ 28 (107)
|+||++.+.| |.|+..+....|++..
T Consensus 56 ~G~Da~TlGN--HefD~~~l~~~l~~~~ 81 (255)
T 1t70_A 56 AGAGCLTLGN--HAWHHKDIYPMLSEDT 81 (255)
T ss_dssp HTCSEEECCT--TTTSSTTHHHHHHTTC
T ss_pred CCCCEEEecc--ccccCchHHHHHhhCC
Confidence 4789998875 7788766777777765
No 379
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=22.83 E-value=40 Score=17.73 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=14.9
Q ss_pred CceecCHHHHHHHHHHcC
Q 042267 70 HGRERTKKEFTALAIEAG 87 (107)
Q Consensus 70 ~g~~rt~~e~~~ll~~aG 87 (107)
.+|..|.+|++..|+++|
T Consensus 43 ~sKGLt~eEI~~Al~ra~ 60 (70)
T 2w84_A 43 KKKGLTDEEIDMAFQQSG 60 (70)
T ss_dssp HHTTCCHHHHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHHHcc
Confidence 445688999999999987
No 380
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=22.62 E-value=44 Score=22.11 Aligned_cols=21 Identities=14% Similarity=0.322 Sum_probs=17.0
Q ss_pred HHHHHHhhCCCCCEEEEEeee
Q 042267 23 ILRNCYKALPNDGKVLVINST 43 (107)
Q Consensus 23 iL~~~~~aL~pgg~l~i~e~~ 43 (107)
.++.+.+.|++||+++++-..
T Consensus 226 ~~~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 226 FLNTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp HHHHHHTTEEEEEEEEECCCC
T ss_pred HHHHHHHHHhcCCEEEEEecc
Confidence 478888999999999887543
No 381
>2jso_A Polymyxin resistance protein PMRD; antibiotic resistance, transcription, signaling Pro; NMR {Escherichia coli}
Probab=22.55 E-value=55 Score=17.84 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=14.9
Q ss_pred CceecCHHHHHHHHHHcC
Q 042267 70 HGRERTKKEFTALAIEAG 87 (107)
Q Consensus 70 ~g~~rt~~e~~~ll~~aG 87 (107)
+...++.+||..+.+..|
T Consensus 68 ~As~Ys~~eW~~~~~~~~ 85 (88)
T 2jso_A 68 SASSYSPDEWERQCKVAG 85 (88)
T ss_dssp EEEECCHHHHHHHHHHTT
T ss_pred eccccCHHHHHHHHhhcc
Confidence 446799999999998766
No 382
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=22.46 E-value=83 Score=18.81 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=15.7
Q ss_pred HHHHHHHHHh---------hCCCCCEEEEEe
Q 042267 20 CIKILRNCYK---------ALPNDGKVLVIN 41 (107)
Q Consensus 20 ~~~iL~~~~~---------aL~pgg~l~i~e 41 (107)
...++++|++ -|+|.|+|++.=
T Consensus 96 ~edL~~~ck~~~g~~e~WvdLeP~Gkl~v~i 126 (138)
T 2enj_A 96 LYSLAERCRKNNGKTEIWLELKPQGRMLMNA 126 (138)
T ss_dssp SHHHHHHHHHTTTCEEEEEECBSSCEEEEEE
T ss_pred HHHHHhhhccCCCceEEEEecccCcEEEEEE
Confidence 3567788777 578888877653
No 383
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=22.45 E-value=97 Score=16.34 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=15.3
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEE
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
+|++++-.-+.+.+ ...+++.+++ .|+..+++
T Consensus 47 ~dlvi~d~~l~~~~---g~~~~~~l~~--~~~~~ii~ 78 (122)
T 1zgz_A 47 VDLILLDINLPDEN---GLMLTRALRE--RSTVGIIL 78 (122)
T ss_dssp CSEEEEESCCSSSC---HHHHHHHHHT--TCCCEEEE
T ss_pred CCEEEEeCCCCCCC---hHHHHHHHHh--cCCCCEEE
Confidence 56666554443333 2455555555 34444443
No 384
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=22.43 E-value=1.1e+02 Score=16.75 Aligned_cols=12 Identities=8% Similarity=0.232 Sum_probs=6.8
Q ss_pred cCHHHHHHHHHH
Q 042267 74 RTKKEFTALAIE 85 (107)
Q Consensus 74 rt~~e~~~ll~~ 85 (107)
.+.+++.+.+++
T Consensus 112 ~~~~~L~~~l~~ 123 (133)
T 2r25_B 112 IKRPKLKTILTE 123 (133)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 455666665554
No 385
>1j26_A Immature colon carcinoma transcript 1; peptide chain release factors, RF-1, the GGQ motif, immature carcinoma transcript 1; NMR {Mus musculus} SCOP: d.50.4.1
Probab=22.41 E-value=1.1e+02 Score=17.48 Aligned_cols=26 Identities=12% Similarity=0.167 Sum_probs=21.1
Q ss_pred CCChHHHHHHHHHHHhhCCCCCEEEE
Q 042267 14 NFDDENCIKILRNCYKALPNDGKVLV 39 (107)
Q Consensus 14 ~~~d~~~~~iL~~~~~aL~pgg~l~i 39 (107)
-+++.....++++....+..+|.|+|
T Consensus 55 ~Lp~~~k~rl~~~~~~ri~~~G~ivv 80 (112)
T 1j26_A 55 WIEEPVRQKIALTHKNKINKAGELVL 80 (112)
T ss_dssp TSCHHHHHHHHHHTTTTBCSSSEEEE
T ss_pred cCCHHHHHHHHHhhccccccCCeEEE
Confidence 45777788899999999998887665
No 386
>1kon_A Protein YEBC, YEBC; alpha/beta, two-domains, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 2.20A {Escherichia coli} SCOP: e.39.1.1
Probab=22.40 E-value=43 Score=22.11 Aligned_cols=14 Identities=14% Similarity=0.233 Sum_probs=11.2
Q ss_pred CCCCEEEEEeeeCC
Q 042267 32 PNDGKVLVINSTLP 45 (107)
Q Consensus 32 ~pgg~l~i~e~~~~ 45 (107)
.|||.-+|+|...+
T Consensus 94 GPgGvaiiVe~lTD 107 (249)
T 1kon_A 94 GPGGTAIMIECLSD 107 (249)
T ss_dssp ETTTEEEEEEEEES
T ss_pred CCCceEEEEEEecC
Confidence 38999999997754
No 387
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=22.27 E-value=1.1e+02 Score=16.73 Aligned_cols=35 Identities=6% Similarity=0.097 Sum_probs=18.7
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhh---CCCCCEEEEE
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKA---LPNDGKVLVI 40 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~a---L~pgg~l~i~ 40 (107)
+|++++-.-+.+.+ ...+++.+++. ..+...++++
T Consensus 61 ~dlvi~D~~l~~~~---g~~~~~~l~~~~~~~~~~~~ii~~ 98 (146)
T 3ilh_A 61 PSIICIDINMPGIN---GWELIDLFKQHFQPMKNKSIVCLL 98 (146)
T ss_dssp CSEEEEESSCSSSC---HHHHHHHHHHHCGGGTTTCEEEEE
T ss_pred CCEEEEcCCCCCCC---HHHHHHHHHHhhhhccCCCeEEEE
Confidence 57777766554433 35566666552 3345555443
No 388
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=22.22 E-value=78 Score=18.58 Aligned_cols=21 Identities=29% Similarity=0.411 Sum_probs=13.6
Q ss_pred HHHHHHHHHh---------hCCCCCEEEEE
Q 042267 20 CIKILRNCYK---------ALPNDGKVLVI 40 (107)
Q Consensus 20 ~~~iL~~~~~---------aL~pgg~l~i~ 40 (107)
...++++|++ -|+|.|+|++.
T Consensus 91 ~edL~~~c~~~~g~~e~WvdLeP~Gkl~~~ 120 (126)
T 1yrk_A 91 VSVLAERCKKNNGKAEFWLDLQPQAKVLMS 120 (126)
T ss_dssp HHHHHHHHHTTTTEEEEEEECBSSCEEEEE
T ss_pred HHHHHhhhccCCCceEEEEecccCcEEEEE
Confidence 4567777777 46676766553
No 389
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=21.99 E-value=34 Score=23.60 Aligned_cols=21 Identities=14% Similarity=0.048 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhCCCCCEEEEE
Q 042267 20 CIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 20 ~~~iL~~~~~aL~pgg~l~i~ 40 (107)
+..+|.=+.+.|+|||.+++-
T Consensus 196 ~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 196 FTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHhCcCCCEEEEE
Confidence 677788889999999999885
No 390
>3k7i_B IHH, HHG-2, indian hedgehog protein; alpha+beta sandwich, autocatalytic cleavage, cell membrane, developmental protein, disease mutation; 1.44A {Homo sapiens} PDB: 3k7g_B 3k7j_B 3k7h_B 3n1f_A 3n1m_B 3n1o_A 3n1p_B 3m1n_A 3mxw_A 3ho5_H 1vhh_A 3d1m_A 3n1r_A 2wg4_A 2wfx_A 2wfq_A 2wfr_A 2wg3_A*
Probab=21.92 E-value=1.6e+02 Score=18.54 Aligned_cols=57 Identities=19% Similarity=0.086 Sum_probs=33.5
Q ss_pred CCCCEEEEEeeeCCCCCCCch-hhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceE
Q 042267 32 PNDGKVLVINSTLPEVPDSTE-ASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGIN 92 (107)
Q Consensus 32 ~pgg~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 92 (107)
-||.+|-|.|...++....+. +--..+..|++. . +...-....+.++..++||.-+-
T Consensus 107 wpGvkLRVtegwde~~hh~~~SLHyEGRAvDItt---s-drd~~k~g~LarLAveAGFDwV~ 164 (187)
T 3k7i_B 107 WPGVKLRVTKGWDEDGHHSEESLHYEGRAVDITT---S-DRDRNKYGLLARLAVEAGFDWVY 164 (187)
T ss_dssp STTCCEEEEECCCSSCCSCTTCGGGGTCEEEEEE---T-TCCGGGHHHHHHHHHHTTCSEEE
T ss_pred cCCceEEEeecccCCCCCCcccccccceeeEEEe---c-ccchhHHHHHHHHHHHcCCCEEE
Confidence 468999999987654332211 111234556532 1 22222345788888899999773
No 391
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=21.80 E-value=64 Score=21.57 Aligned_cols=21 Identities=10% Similarity=0.205 Sum_probs=17.1
Q ss_pred HHHHHHHhhCCCCCEEEEEee
Q 042267 22 KILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 22 ~iL~~~~~aL~pgg~l~i~e~ 42 (107)
..++.+.++|+|+|+++++-.
T Consensus 252 ~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 252 KCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHHHHHHSCTTCEEEECSC
T ss_pred HHHHHHHHHHhcCCEEEEEec
Confidence 457788899999999988753
No 392
>2cnq_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ligase, phosphoribosylaminoimidazolesuccinocarboxamide (saicar) SYN ligase; HET: ADP AMZ AMP; 1.00A {Saccharomyces cerevisiae} SCOP: d.143.1.1 PDB: 1a48_A* 1obd_A* 2cnu_A* 2cnv_A* 1obg_A*
Probab=21.74 E-value=77 Score=21.55 Aligned_cols=45 Identities=11% Similarity=0.244 Sum_probs=27.5
Q ss_pred CEEEEEeee-CCCCCCCchhhhhhhhhcHHHHhhCCCc---eecCHHHHHHHHHHcCCCce
Q 042267 35 GKVLVINST-LPEVPDSTEASRDSFILDAIFLIQIPHG---RERTKKEFTALAIEAGFKGI 91 (107)
Q Consensus 35 g~l~i~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~rt~~e~~~ll~~aGf~~~ 91 (107)
|.|+++|.+ .|++ +++|+..-. . .| ...+.+-+++||.+.|+...
T Consensus 227 G~ivL~DEI~TPDS---------sR~W~~~~y--~-~G~~~~s~DKq~~R~~l~~~g~~~~ 275 (306)
T 2cnq_A 227 NEIILVDEVLTPDS---------SRFWNGASY--K-VGESQDSYDKQFLRDWLTANKLNGV 275 (306)
T ss_dssp TEEEEESCCSCTTT---------EEEEETTTC--C-TTSCCCCSSTHHHHHHHHHTTCTTC
T ss_pred CcEEEEEeecCCCc---------cceeccccc--c-CCCCCcccCHHHHHhHHhhcCCCCC
Confidence 788888877 4433 134443211 1 12 33678889999998887653
No 393
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=21.74 E-value=82 Score=15.26 Aligned_cols=57 Identities=11% Similarity=-0.006 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceE
Q 042267 15 FDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGIN 92 (107)
Q Consensus 15 ~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 92 (107)
.+-..|..-+++..+.++||-.-+-++ .... . .... + ..+.+++.+.++++||+...
T Consensus 13 m~C~~C~~~ie~~l~~~~~GV~~~~v~--~~~~-~--------~~v~---------~-~~~~~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 13 MTCSGCSGAVNKVLTKLEPDVSKIDIS--LEKQ-L--------VDVY---------T-TLPYDFILEKIKKTGKEVRS 69 (73)
T ss_dssp CCSHHHHHHHHHHHHTTTTSEEEEEEE--TTTT-E--------EEEE---------E-SSCHHHHHHHHHTTSSCEEE
T ss_pred eECHHHHHHHHHHHHhCCCCceEEEEE--CCCC-E--------EEEE---------E-eCCHHHHHHHHHHhCCCcee
Confidence 555667888888887776552211112 1111 0 0010 1 13578899999999998643
No 394
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=21.57 E-value=1.2e+02 Score=16.91 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=20.9
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.+|++++-.-+.+.+ ...+++++++. .|+..++++
T Consensus 66 ~~dlii~D~~l~~~~---g~~~~~~l~~~-~~~~~ii~l 100 (150)
T 4e7p_A 66 SVDIAILDVEMPVKT---GLEVLEWIRSE-KLETKVVVV 100 (150)
T ss_dssp CCSEEEECSSCSSSC---HHHHHHHHHHT-TCSCEEEEE
T ss_pred CCCEEEEeCCCCCCc---HHHHHHHHHHh-CCCCeEEEE
Confidence 467777776554433 45667776664 455555554
No 395
>4f3q_A Transcriptional regulatory protein CBU_1566; YEBC family; 2.15A {Coxiella burnetii}
Probab=21.45 E-value=32 Score=22.64 Aligned_cols=20 Identities=15% Similarity=0.376 Sum_probs=14.0
Q ss_pred cCHHHHHHHHHHcCCCceEE
Q 042267 74 RTKKEFTALAIEAGFKGINF 93 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~~~ 93 (107)
.+.+++...+-++|-+.+..
T Consensus 149 ~~~d~~~e~aieaGAeDv~~ 168 (247)
T 4f3q_A 149 SDEEKIMEIALEVGAEDVTT 168 (247)
T ss_dssp CCHHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHhCCCceeee
Confidence 36777777777788776653
No 396
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=21.29 E-value=1.1e+02 Score=20.77 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=22.6
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHh----hCCCCCEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYK----ALPNDGKVLV 39 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~----aL~pgg~l~i 39 (107)
++|+|++. .++.....+++.+.. .++||..++.
T Consensus 103 ~aDvVila-----v~~~~~~~vl~~i~~~~~~~l~~~~ivvs 139 (375)
T 1yj8_A 103 DADLLIFI-----VPCQYLESVLASIKESESIKIASHAKAIS 139 (375)
T ss_dssp TCSEEEEC-----CCHHHHHHHHHHHTC---CCCCTTCEEEE
T ss_pred CCCEEEEc-----CCHHHHHHHHHHHhhhhhccCCCCCEEEE
Confidence 35666654 455667888888887 7888765544
No 397
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=21.29 E-value=1.2e+02 Score=16.93 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=19.3
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEE
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVI 40 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~ 40 (107)
.+|++++-..+.+.+ ...+++++++. .|+-.++++
T Consensus 58 ~~dlvi~D~~l~~~~---g~~~~~~l~~~-~~~~~ii~~ 92 (153)
T 3hv2_A 58 EVDLVISAAHLPQMD---GPTLLARIHQQ-YPSTTRILL 92 (153)
T ss_dssp CCSEEEEESCCSSSC---HHHHHHHHHHH-CTTSEEEEE
T ss_pred CCCEEEEeCCCCcCc---HHHHHHHHHhH-CCCCeEEEE
Confidence 367777766554433 35566666653 345555443
No 398
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=21.19 E-value=1.1e+02 Score=21.42 Aligned_cols=41 Identities=22% Similarity=0.187 Sum_probs=25.4
Q ss_pred ceeEEEecccccC--C-C-hHHHHHHHHHHHhhCCCCCEEEEEee
Q 042267 2 QVYLSILQWMLHN--F-D-DENCIKILRNCYKALPNDGKVLVINS 42 (107)
Q Consensus 2 ~~D~v~~~~vlh~--~-~-d~~~~~iL~~~~~aL~pgg~l~i~e~ 42 (107)
++|+.++-...-+ + + .+...++.+.+.+.++.||+++|--+
T Consensus 179 ~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~f 223 (431)
T 3iek_A 179 LADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTF 223 (431)
T ss_dssp CCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEec
Confidence 4577665554322 2 2 23356677777788888999988543
No 399
>3n1g_B Desert hedgehog protein; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence, fibronectins; 1.90A {Homo sapiens} SCOP: d.65.1.2 PDB: 3n1q_B
Probab=21.05 E-value=1.6e+02 Score=18.23 Aligned_cols=78 Identities=15% Similarity=0.132 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHhhCC---CCCEEEEEeeeCCCCCCCch-hhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceE
Q 042267 17 DENCIKILRNCYKALP---NDGKVLVINSTLPEVPDSTE-ASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGIN 92 (107)
Q Consensus 17 d~~~~~iL~~~~~aL~---pgg~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 92 (107)
|..+...|..+...+. +|..|.|++-...+..+... +--.....|+.+ ++........+.++..++||.-+
T Consensus 81 d~rl~d~L~~L~~~v~~~~~g~pi~V~SGYRsp~~Na~~SlH~~GrAaDI~~----~~~~~~k~~~La~~A~~~gfd~V- 155 (170)
T 3n1g_B 81 TERCKERVNALAIAVMNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITT----SDRDRNKYGLLARLAVEAGFDWV- 155 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCCEEEEESSCCSCCSCTTCGGGGTCEEEEEE----TTCCGGGHHHHHHHHHHTTCSEE-
T ss_pred CHHHHHHHHHHHHHHhcccCCCcEEEEecccCccccCCcCchheeEEEEEEe----CCccHHHHHHHHHHHHHCCCCEE-
Confidence 3346677777766654 57788888765543322111 111123445432 12211222356678889999988
Q ss_pred EEEcCCc
Q 042267 93 FECNVCN 99 (107)
Q Consensus 93 ~~~~~~~ 99 (107)
.++-.++
T Consensus 156 ~Y~~~~f 162 (170)
T 3n1g_B 156 YYESRNH 162 (170)
T ss_dssp ECCCSSC
T ss_pred EeCCCCE
Confidence 5544333
No 400
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=20.89 E-value=85 Score=20.66 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=22.0
Q ss_pred ceeEEEecccccCCChHHHHHHH---------------HHHHhhCCCCC
Q 042267 2 QVYLSILQWMLHNFDDENCIKIL---------------RNCYKALPNDG 35 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL---------------~~~~~aL~pgg 35 (107)
.||+|+. +.-++|+.+...++| +.+.+.++|+|
T Consensus 106 ~~D~Vv~-n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 106 KFDVCTA-NIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CCSEEEE-ECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred cCCEEEE-cCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 4788876 445567776667777 34667787765
No 401
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=20.84 E-value=1.2e+02 Score=18.28 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=21.1
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
.+|+++ .++.+...+++.+++. +++-.++++-
T Consensus 44 ~~dlvi-------lp~~~g~~~~~~lr~~-~~~~~ii~lt 75 (223)
T 2hqr_A 44 NYDLVM-------VSDKNALSFVSRIKEK-HSSIVVLVSS 75 (223)
T ss_dssp CCSEEE-------ECCTTHHHHHHHHHHH-CTTSEEEEEE
T ss_pred CCCEEE-------eCCCCHHHHHHHHHhC-CCCCcEEEEE
Confidence 467887 3444457888888887 4376776654
No 402
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=20.80 E-value=1.2e+02 Score=16.63 Aligned_cols=31 Identities=19% Similarity=0.138 Sum_probs=18.1
Q ss_pred cCHHHHHHHHHHcCCCceEEEEcCCceeEEEE
Q 042267 74 RTKKEFTALAIEAGFKGINFECNVCNSYVMEF 105 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~~~~~~~~~~~vi~~ 105 (107)
.++++++++|.+.| ++..+.-....++.+++
T Consensus 28 ~t~~~l~~~F~~~G-~v~~~~i~~~g~afV~f 58 (115)
T 3beg_B 28 GSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 58 (115)
T ss_dssp CCTTHHHHHHGGGS-CEEEEEECTTSEEEEEE
T ss_pred CCHHHHHHHHHhcC-CeEEEEEecCCEEEEEE
Confidence 46778888888877 55444322224454443
No 403
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=20.58 E-value=1.7e+02 Score=18.53 Aligned_cols=31 Identities=13% Similarity=-0.001 Sum_probs=21.0
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEE
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVL 38 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~ 38 (107)
+|++++. .+......+++.+...++||..++
T Consensus 58 ~D~vi~a-----v~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 58 AKIIFLC-----TPIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp CSEEEEC-----SCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred CCEEEEE-----CCHHHHHHHHHHHHhhCCCCCEEE
Confidence 4555543 455566788888888888876543
No 404
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=20.56 E-value=1.6e+02 Score=19.37 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=23.7
Q ss_pred ceeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
++|++++. .+..+...+++.+...++|+..++.+.
T Consensus 86 ~~D~vila-----vk~~~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 86 GADLVLFC-----VKSTDTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp TCSEEEEC-----CCGGGHHHHHHHHTTTSCTTCEEEEEC
T ss_pred CCCEEEEE-----cccccHHHHHHHHHHhcCCCCEEEEeC
Confidence 35666554 333346788899999999987766553
No 405
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=20.41 E-value=2e+02 Score=19.45 Aligned_cols=73 Identities=10% Similarity=0.080 Sum_probs=37.7
Q ss_pred cCCChHHHHHHHHHHHhhCCCCCEEEEEeeeCCCCCCCchhhhhhhhhcHHHHhhCCCceecCHHHHHHHHHHcCCCceE
Q 042267 13 HNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGIN 92 (107)
Q Consensus 13 h~~~d~~~~~iL~~~~~aL~pgg~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 92 (107)
..|+.+++.++++. |.+-|..+|=|++.+++.. ...+.....++... . +....+..+++++++.-....+.
T Consensus 192 ~~~~~~~a~~~~~~----L~~~~i~~iEqP~~~~d~~--~~~~l~~~~~iPIa--~-dE~~~~~~~~~~~l~~~~~d~v~ 262 (354)
T 3jva_A 192 QAWTPKDAVKAIQA----LADYQIELVEQPVKRRDLE--GLKYVTSQVNTTIM--A-DESCFDAQDALELVKKGTVDVIN 262 (354)
T ss_dssp TCSCHHHHHHHHHH----TTTSCEEEEECCSCTTCHH--HHHHHHHHCSSEEE--E-STTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCCHHHHHHHHHH----HHhcCCCEEECCCChhhHH--HHHHHHHhCCCCEE--E-cCCcCCHHHHHHHHHcCCCCEEE
Confidence 45766666555544 4555666665555433211 11111111121111 2 55578888999998876666655
Q ss_pred EE
Q 042267 93 FE 94 (107)
Q Consensus 93 ~~ 94 (107)
+.
T Consensus 263 ~k 264 (354)
T 3jva_A 263 IK 264 (354)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 406
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=20.36 E-value=52 Score=17.31 Aligned_cols=20 Identities=10% Similarity=0.162 Sum_probs=15.7
Q ss_pred cCHHHHHHHHHHcCCCceEE
Q 042267 74 RTKKEFTALAIEAGFKGINF 93 (107)
Q Consensus 74 rt~~e~~~ll~~aGf~~~~~ 93 (107)
-|+++++++|++.|.++.++
T Consensus 13 ~te~~l~~~F~~~G~~v~~v 32 (91)
T 2lxi_A 13 ATEDDIRGQLQSHGVQAREV 32 (91)
T ss_dssp CCHHHHHHHHHHHTCCCSBC
T ss_pred CCHHHHHHHHHHhCCEeEEE
Confidence 57899999999999655443
No 407
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=20.26 E-value=81 Score=20.60 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=21.3
Q ss_pred ceeEEEecccccC-C------------ChHHHHHHHHHHHhhCCCCCEEEEEe
Q 042267 2 QVYLSILQWMLHN-F------------DDENCIKILRNCYKALPNDGKVLVIN 41 (107)
Q Consensus 2 ~~D~v~~~~vlh~-~------------~d~~~~~iL~~~~~aL~pgg~l~i~e 41 (107)
+||+|++.++=.. + +++ ..+.|++..+ .||-|+++-
T Consensus 70 ~yDvIIl~d~~~~~~l~~~~~~~~~~~~~~-~~~~l~~~V~---~GGgLi~~g 118 (248)
T 3soz_A 70 CYDAIVISDIGSNTFLLQNRTFYNMDIIPD-ALQLIADYVA---EGGGLLMIG 118 (248)
T ss_dssp TCSEEEEESCCHHHHHSCHHHHTTCCCCCC-HHHHHHHHHH---TTCEEEEEC
T ss_pred cCCEEEEcCCCcchhccCccccccccCCHH-HHHHHHHHHH---hCCEEEEEc
Confidence 5899999876542 2 221 2455555554 487777763
No 408
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=20.18 E-value=42 Score=21.28 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=17.8
Q ss_pred eeEEEecccccCCChHHHHHHHHHHHhhCCCCCEEE
Q 042267 3 VYLSILQWMLHNFDDENCIKILRNCYKALPNDGKVL 38 (107)
Q Consensus 3 ~D~v~~~~vlh~~~d~~~~~iL~~~~~aL~pgg~l~ 38 (107)
+|++++.- ++.....+++.+...++||..++
T Consensus 64 aDvVilav-----~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 64 ADILILSI-----KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp CSEEEECS-----CTTTHHHHC---CCSSCTTCEEE
T ss_pred CCEEEEEe-----CHHHHHHHHHHHHhhcCCCCEEE
Confidence 56666543 44456778888887787776444
Done!