BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042276
(71 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 49/64 (76%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EAN L +LMIQRG +PDT T N L+DGFCL R D AR+L VSM SKG + DA S+++
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383
Query: 61 LING 64
LING
Sbjct: 384 LING 387
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL M+ GV+P+ T N L+D C A + + A LL M +G D F+++ LI+
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351
Query: 64 G 64
G
Sbjct: 352 G 352
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 6 GLAEL--MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
GLA L M++RG +P+T T +L+ G CL R A LL M G + + ++ L+N
Sbjct: 146 GLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLN 205
Query: 64 G 64
G
Sbjct: 206 G 206
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L M ++G P+ T N LM GFC D + ELL M K DA + SI
Sbjct: 534 LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISI 593
Query: 61 LIN 63
+++
Sbjct: 594 VVD 596
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + P N L+DG C A + + AREL + +G + + ++++
Sbjct: 464 LSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTV 523
Query: 61 LING 64
+I+G
Sbjct: 524 MIHG 527
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + G+ P+ T ++ G C + + + A++L + M KGC + + + L+
Sbjct: 502 ARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMR 561
Query: 64 G 64
G
Sbjct: 562 G 562
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E+MIQRG+ P+ T N+L++GFCL + AREL VSM SKGC+ D +++LI
Sbjct: 322 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 381
Query: 63 NG 64
NG
Sbjct: 382 NG 383
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 6 GLAEL--MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
GLA + +++RG PD T L+ G C+ R +A L M GC +A ++ L+
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 64 G 64
G
Sbjct: 210 G 210
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E + Q + PD T N ++ FC + +A L M GC D +++
Sbjct: 495 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 554
Query: 61 LING 64
LI G
Sbjct: 555 LIRG 558
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E+MIQRG+ P+ T N+L++GFCL + AREL VSM SKGC+ D +++LI
Sbjct: 330 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 389
Query: 63 NG 64
NG
Sbjct: 390 NG 391
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 6 GLAEL--MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
GLA + +++RG PD T L+ G C+ R +A L M GC +A ++ L+
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 64 G 64
G
Sbjct: 210 G 210
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L E M +G+ P + +L+ GFC +++ A+ L M ++G + + + ++L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Query: 62 IN 63
I+
Sbjct: 319 ID 320
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E + Q + PD T N ++ FC + +A L M GC D +++
Sbjct: 503 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 562
Query: 61 LING 64
LI G
Sbjct: 563 LIRG 566
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +MI+ G+ PD T N+L++GFC+ + AREL VSM SKGC+ D S+++LI
Sbjct: 303 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 362
Query: 63 NGGSARIR 70
NG S ++
Sbjct: 363 NGYSKTLK 370
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L E M +G+ P + N+L+ GFC A +++ ++ LL M +G + D + ++L
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291
Query: 62 IN 63
I+
Sbjct: 292 ID 293
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++RG +P+ T N L+ G C+ R A L + M GC D ++ LI G
Sbjct: 130 ILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKG 183
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN L + M G PD T N LM GF +++ + +LL M K DA + SI
Sbjct: 511 VDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSI 570
Query: 61 LIN 63
+++
Sbjct: 571 VVD 573
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E + G P+ T ++ GFC + D+A L+ M + GC D +++
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535
Query: 61 LING 64
L+ G
Sbjct: 536 LMRG 539
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +MI+ G+ PD T N+L++GFC+ + AREL VSM SKGC+ D S+++LI
Sbjct: 278 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 337
Query: 63 NGGSARIR 70
NG S ++
Sbjct: 338 NGYSKTLK 345
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++RG +P+ T N L+ G C+ R A L + M GC D ++ LI G
Sbjct: 130 ILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKG 183
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN L + M G PD T N LM GF +++ + +LL M K DA + SI
Sbjct: 486 VDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSI 545
Query: 61 LIN 63
+++
Sbjct: 546 VVD 548
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E + G P+ T ++ GFC + D+A L+ M + GC D +++
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510
Query: 61 LING 64
L+ G
Sbjct: 511 LMRG 514
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E+MIQRG+ P+ T N+L+DGFC+ + AREL +SM SKG + D S++ LI
Sbjct: 325 EAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLI 384
Query: 63 NG 64
NG
Sbjct: 385 NG 386
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L E M +G+ PD + + L+ GFC A ++D+++ L M +G + D + S+L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313
Query: 62 IN 63
I+
Sbjct: 314 ID 315
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E + Q G+ PD T N ++ GFC + D A L M GC D +++
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557
Query: 61 LING 64
L+ G
Sbjct: 558 LLCG 561
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 13 QRGVN--PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
Q GVN P T + ++DG C R D A+EL M ++G D S+S LI+G
Sbjct: 228 QYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHG 281
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++RG P+ T L+ G C+ R A L + M GC +A ++ LI G
Sbjct: 152 ILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKG 205
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D AN L E M + G PD N L+ GFC ++ + +LL M K +A S +I
Sbjct: 533 VDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTI 592
Query: 61 LIN 63
+++
Sbjct: 593 VVD 595
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + LMI+RG+ P+ T N+LMDG+CL + D AR++ M +KGC D S++I
Sbjct: 400 VSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNI 459
Query: 61 LING 64
LI G
Sbjct: 460 LIKG 463
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + ++M+ +G PD + N L+ G+C ++R D A++L M KG ++ +H+
Sbjct: 435 MDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTT 494
Query: 61 LING 64
LI+G
Sbjct: 495 LISG 498
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +G+ P++ T L+ G C A R A+EL MGS GC D ++S
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYST 529
Query: 61 LING 64
L++G
Sbjct: 530 LLSG 533
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G P T N L++G C+ R A E L + S+G + ++H++++NG
Sbjct: 165 IFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNG 218
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G+ ++MI++GV P+ +T N+LM+G+CL ++ AR + +M +KGC + S++I
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369
Query: 61 LING 64
LING
Sbjct: 370 LING 373
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + MI +G P+ + N L++G+C A R D AREL M +G + F+++ LI
Sbjct: 347 EARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLI 406
Query: 63 NG 64
+G
Sbjct: 407 SG 408
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M RG+ P+T N L+ G C A R AREL M ++GC D + +I
Sbjct: 380 IDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTI 439
Query: 61 LIN 63
L++
Sbjct: 440 LLD 442
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G PD T ++L++G C D+F RA E M + G + + +++ +I G
Sbjct: 145 IIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKG 198
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL + M + G PD N ++DG C A ++ + KG + D F++SIL++
Sbjct: 208 AVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMH 267
Query: 64 G 64
G
Sbjct: 268 G 268
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M +G +PD TC L+D C D A L +M K + ++ ILI
Sbjct: 417 EARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T N+++DGFC DR D A ++ M +KGC D F+ + LI
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 403 DGYCGAKRI 411
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ VSMGSK + + + LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588
Query: 63 NG 64
NG
Sbjct: 589 NG 590
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +PD T L+DG+C A R D ELL M +G + +++
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435
Query: 61 LING 64
LI+G
Sbjct: 436 LIHG 439
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M + +P+ T N L++G+C A R D EL MG +G DA +
Sbjct: 562 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 621
Query: 61 LING 64
LI G
Sbjct: 622 LIYG 625
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M ++G+ PD T N+++ GFC + R+ A +LL M + D +++ LI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 63 NG 64
N
Sbjct: 333 NA 334
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L++ MI GV PD TCN L+DG C + A E+ +M
Sbjct: 446 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 505
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI G
Sbjct: 506 GVEPDVLTYNILICG 520
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G++PD T L+ G C+ DR A + M C+ + + + L+NG
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNG 193
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M +RG+ +T T N L+ GFCL + A +L M S G D + +
Sbjct: 411 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 470
Query: 61 LING 64
L++G
Sbjct: 471 LLDG 474
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T N+++DGFC DR D A ++ M +KGC D F+ + LI
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 401 DGYCGAKRI 409
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ VSMGSK + + + LI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586
Query: 63 NG 64
NG
Sbjct: 587 NG 588
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +PD T L+DG+C A R D ELL M +G + +++
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 61 LING 64
LI+G
Sbjct: 434 LIHG 437
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M + +P+ T N L++G+C A R D EL MG +G DA +
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619
Query: 61 LING 64
LI G
Sbjct: 620 LIYG 623
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L++ MI GV PD TCN L+DG C + A E+ +M
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI G
Sbjct: 504 GVEPDVLTYNILICG 518
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G+ P+ T N ++ GFC++ R+ A+ LL M + + +++ LIN
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M +RG+ +T T N L+ GFCL + A +L M S G D + +
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468
Query: 61 LING 64
L++G
Sbjct: 469 LLDG 472
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T N+++DGFC DR D A ++ M +KGC D F+ + LI
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 401 DGYCGAKRI 409
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ VSMGSK + + + LI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586
Query: 63 NG 64
NG
Sbjct: 587 NG 588
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +PD T L+DG+C A R D ELL M +G + +++
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 61 LING 64
LI+G
Sbjct: 434 LIHG 437
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M + +P+ T N L++G+C A R D EL MG +G DA +
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619
Query: 61 LING 64
LI G
Sbjct: 620 LIYG 623
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L++ MI GV PD TCN L+DG C + A E+ +M
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI G
Sbjct: 504 GVEPDVLTYNILICG 518
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G+ P+ T N ++ GFC++ R+ A+ LL M + + +++ LIN
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M +RG+ +T T N L+ GFCL + A +L M S G D + +
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468
Query: 61 LING 64
L++G
Sbjct: 469 LLDG 472
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E+ IQRG+ D T N+L+DGFC AR+L +SM SKGC+ + S++ILI
Sbjct: 150 EAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILI 209
Query: 63 NG 64
NG
Sbjct: 210 NG 211
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRAR---ELLVSMGSKGCKQDAFSHSILING 64
Q G+ P+ TCN ++ GFC ++ D+A E + M GC D +++ L+ G
Sbjct: 335 QEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRG 389
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + E M +G+ P+ + ++L+ GFC A + + ++ L M +G + + ++L
Sbjct: 79 DEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVL 138
Query: 62 IN 63
I+
Sbjct: 139 ID 140
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+ + MI++GV PD T +A+MDG+CL + DRAR + + KG K + FS+SI
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348
Query: 61 LING 64
LING
Sbjct: 349 LING 352
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + E + G+ PD T N ++ GFC FD + +L M GC + ++++++
Sbjct: 466 EAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIM 525
Query: 63 NG 64
G
Sbjct: 526 QG 527
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M Q+ + P+ T N+L+DG C ++++ + LL M + + + SI
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278
Query: 61 LING 64
LI+G
Sbjct: 279 LIDG 282
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M+ +NP+ T + L+DG C + + A E++ M KG + D ++S +++G R
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+GL +LM+QR V P T T N L++G+CLA D +++ +SM +K C+ DA S+SIL+
Sbjct: 341 EASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILM 400
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M ++G+ P+ T +L+ G C A ++ A+ L + M G D + S+LI
Sbjct: 279 MKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLI 330
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++++G P+T T L+ G CL + A + MG C+ A + +LI+G
Sbjct: 167 MILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISG 221
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MIQR ++P+ T N+L++GFC+ DR D A+++ M SK C D +++ LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 63 NG 64
NG
Sbjct: 388 NG 389
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + LM+ + PD T N L++GFC A + EL M +G + +++
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 61 LING 64
LI+G
Sbjct: 421 LIHG 424
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PDT T L+ G ++ A L+ M KGC+ D ++
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 61 LINGGSAR 68
+ING R
Sbjct: 211 VINGLCKR 218
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T N+L++GFC +R A L+ M G + D + + L++G
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + PD T N + +G C A + + +L S+ KG K D +++
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 61 LING 64
+I+G
Sbjct: 526 MISG 529
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV+P+ T N L+DG C + ++A + + + D ++++I+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 62 ING 64
G
Sbjct: 492 SEG 494
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M RG NPD T A++DGFC R D A+++L M GCK + S++
Sbjct: 427 MDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTA 486
Query: 61 LING 64
L+NG
Sbjct: 487 LLNG 490
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+++A E M G+ PD T N+L+ G+C +R + A EL+ + SKGC D S+
Sbjct: 286 LEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSY 343
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + +G + D +A++ FC R D A+ L++ M S+GC D +++ +
Sbjct: 393 DDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAI 452
Query: 62 ING 64
++G
Sbjct: 453 VDG 455
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
M+ A + + M G +PD T AL D R D A EL+V M SKG
Sbjct: 602 MEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKG 651
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ +M++RG PD T NALM+GFCL++ AREL M +G + D ++++LI
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 63 NG 64
NG
Sbjct: 343 NG 344
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G P+ T N L++GFC+ +A + + +KG D FS+ LING
Sbjct: 116 ILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLING 169
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M++RG+ PD N L++G+C D D A L + K + +++
Sbjct: 316 VSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNS 375
Query: 61 LING 64
LI+G
Sbjct: 376 LIDG 379
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T + L+DG+CLA + D A +LL SM S G K D ++S LI
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445
Query: 63 NG 64
NG
Sbjct: 446 NG 447
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ PD T + L++G+C R A L M S G D +++I
Sbjct: 419 MDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNI 478
Query: 61 LING 64
++ G
Sbjct: 479 ILQG 482
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
GV PD T N+LMD C R AR++ SM +G K + ++ L+ G + +
Sbjct: 188 GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATK 241
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSHS 59
++A + + +++RG+ PD + N L++G C +R A ELL M G C D S+S
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 60 ILING 64
+ING
Sbjct: 93 TVING 97
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+++A E MI G++P N+L+ G C ++++RA EL++ M +G C F +S
Sbjct: 314 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 373
Query: 60 IL 61
I+
Sbjct: 374 II 375
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ M+ + ++P+ T N+++ C A D+A E+L +M G D +++
Sbjct: 104 LDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 163
Query: 61 LING 64
+++G
Sbjct: 164 IVHG 167
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + M++ GV PD T N+++ GFC + + A L M S G + D +++
Sbjct: 139 VDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNS 198
Query: 61 LIN 63
L++
Sbjct: 199 LMD 201
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G+ + MI++GV P+T T ++LM+G+ L +R AR++ +M ++GC D S++I
Sbjct: 26 ISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITRGCIPDVLSYNI 85
Query: 61 LING 64
LING
Sbjct: 86 LING 89
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M RG+ P+T+T N L+ GF + + +L M ++GC D ++SI
Sbjct: 96 IDEAKQIFDEMSFRGLIPNTATYNTLLGGF-----WKQKIQLFKDMHAQGCSPDLVTYSI 150
Query: 61 LINGGSAR 68
++G S +
Sbjct: 151 FLHGLSKQ 158
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + MI RG PD + N L++G C A R D A+++ M +G + +++ L+
Sbjct: 63 EARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLL 122
Query: 63 NG 64
G
Sbjct: 123 GG 124
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +NPD N L+D C + + + AREL + + KG D S +
Sbjct: 161 LDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTS 220
Query: 61 LING 64
+I+G
Sbjct: 221 IISG 224
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T N+++DGFC +R D A + M +KGC D F+ + LI
Sbjct: 337 EAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLI 396
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 397 DGYCGAKRI 405
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +PD T N L+ G+C A R D EL MG +G DA ++
Sbjct: 556 LDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYIT 615
Query: 61 LING 64
LI+G
Sbjct: 616 LIHG 619
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + +M +G +PD T N L+DG+C A R D ELL M G D +++
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 61 LING 64
LI+G
Sbjct: 430 LIHG 433
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M RG+ P+T T +++++G C R D A ++ SMGSK D + + L+
Sbjct: 523 EAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582
Query: 63 NG 64
+G
Sbjct: 583 SG 584
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L M ++G+ PD T N ++DGFC + R+ A+ LL M + + ++S LI
Sbjct: 267 DAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALI 326
Query: 63 NG 64
N
Sbjct: 327 NA 328
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L++ MI GV PD TCN L+DG C + A E+ +M
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN 499
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 500 GVEPDVQTYNILISG 514
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M + G+ DT+T N L+ GFCL + A +L M S G D + +
Sbjct: 405 IDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 464
Query: 61 LING 64
L++G
Sbjct: 465 LLDG 468
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MIQRG++PDT T +L+DGFC ++ D+A +L M SKGC + + +ILI
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 63 NG 64
NG
Sbjct: 395 NG 396
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN + +LM+ +G P+ T N L++G+C A+ D EL M +G D +++
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 61 LING 64
LI G
Sbjct: 428 LIQG 431
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RGV DT T N L+ GFC + + A+EL M S+ + D S+ I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 61 LING 64
L++G
Sbjct: 463 LLDG 466
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G PDT T + L++G CL R A EL+ M G K + + L+NG
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MIQRG++PDT T +L+DGFC ++ D+A +L M SKGC + + +ILI
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 63 NG 64
NG
Sbjct: 395 NG 396
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN + +LM+ +G P+ T N L++G+C A+ D EL M +G D +++
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 61 LING 64
LI G
Sbjct: 428 LIQG 431
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RGV DT T N L+ GFC + + A+EL M S+ + D S+ I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 61 LING 64
L++G
Sbjct: 463 LLDG 466
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G PDT T + L++G CL R A EL+ M G K + + L+NG
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L + M+QRG+ P+T T N+L+DGFC +R + A +++ M SKGC D + +ILI
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 63 NG 64
NG
Sbjct: 411 NG 412
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + +LMI +G +PD T N L++G+C A+R D EL M +G + +++
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 61 LING 64
L+ G
Sbjct: 444 LVQG 447
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RGV +T T N L+ GFC + + + A++L M S+ + D S+ I
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 61 LING 64
L++G
Sbjct: 479 LLDG 482
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT N L++G CL R A EL+ M G K + + L+NG
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G P+ T +++ C + + A ELL M + K DA +SI
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 61 LING 64
+I+G
Sbjct: 269 IIDG 272
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M +G D T N L+ GFC A R+D +LL M + + + S+
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 61 LIN 63
LI+
Sbjct: 339 LID 341
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G+ + M + GV PD T ++LM G+ L AR+L +M +KGCK D FS++I
Sbjct: 324 VSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383
Query: 61 LING 64
LING
Sbjct: 384 LING 387
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI +G PD + N L++G+C R D A++L M +G + S++ LI
Sbjct: 361 EARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLI 420
Query: 63 NG 64
+G
Sbjct: 421 HG 422
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI +G+ P+ + N L+ G C AR L +M + G + F++SI
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSI 453
Query: 61 LING 64
L++G
Sbjct: 454 LLDG 457
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + +I+ G+ P T L++ C +F +A EL M ++GC+ D ++++
Sbjct: 149 VDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTT 208
Query: 61 LING 64
+ING
Sbjct: 209 IING 212
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+EL + +G+ P+ +++G C D A E +M GC D S++++I G
Sbjct: 506 FSELFV-KGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG 562
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M +G++PD T N+L+ G C ++ A LL M S D + ++
Sbjct: 254 VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNV 313
Query: 61 LIN 63
L++
Sbjct: 314 LVD 316
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M+ RG PD T +++G C A LL M GC+ + ++S +I
Sbjct: 186 QAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTII 245
Query: 63 N 63
+
Sbjct: 246 D 246
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E MIQR ++PDT T N L++GFC+ +R D A+++ M SK C + +++ LI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 63 NG 64
NG
Sbjct: 406 NG 407
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ D ++
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 61 LINGGSAR 68
++NG R
Sbjct: 229 VVNGLCKR 236
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M+ + P+ T N L++GFC R + EL M +G + +++
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 61 LING 64
+I G
Sbjct: 439 IIQG 442
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++G+C + R A L+ M G K D F+ + LI+G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L M+++ +NP+ T NAL+D F + A +L M + D ++++LI
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 63 NG 64
NG
Sbjct: 371 NG 372
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ + ++MIQRGV PD T ALMDG CL D A ++ +M KGC + S+S LIN
Sbjct: 303 AHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLIN 362
Query: 64 G 64
G
Sbjct: 363 G 363
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + + + PD + N ++DG C + A +L S+ SKG D ++++I
Sbjct: 440 LDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTI 499
Query: 61 LING 64
+ING
Sbjct: 500 MING 503
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA+ + + M+++G P+ + + L++G+C R D+A L M + + +++
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNT 394
Query: 61 LING 64
LI+G
Sbjct: 395 LIHG 398
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + +G++PD T +++G CL A +L M + GC D ++++
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNL 534
Query: 61 LING 64
+ G
Sbjct: 535 ITRG 538
>gi|147742767|gb|ABQ50548.1| hypothetical protein [Brassica rapa]
Length = 229
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELL-VSMGSKGCKQDAFSHSILING 64
MI RG++PDT T N+L+DG C+ +R D A +++ V M SKGC D + +ILING
Sbjct: 1 MITRGIDPDTITYNSLIDGLCIENRLDEANQMVDVVMVSKGCDPDIVTFNILING 55
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG+ DT T N L+ GFC A + D A+EL M S+G + D ++ IL++G
Sbjct: 75 RGLVADTVTYNTLVQGFCEAGKLDVAKELFQEMVSQGARPDIVTYRILLDG 125
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAEL-MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEAN + ++ M+ +G +PD T N L++G+C A D + + +G D +++
Sbjct: 26 LDEANQMVDVVMVSKGCDPDIVTFNILINGYCKAKLVDEGMRVFREISLRGLVADTVTYN 85
Query: 60 ILING 64
L+ G
Sbjct: 86 TLVQG 90
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M ++GV PD ST NALMDG+CL + A+++ M KGC A S++I
Sbjct: 319 VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378
Query: 61 LING 64
LING
Sbjct: 379 LING 382
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + E+MI++G P + N L++G+C + R D A+ LL M K D ++S
Sbjct: 354 MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYST 413
Query: 61 LING 64
L+ G
Sbjct: 414 LMQG 417
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M + +NPDT T + LM G C R A L M S G + ++ I
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448
Query: 61 LING 64
L++G
Sbjct: 449 LLDG 452
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G++PD T NAL++G C + A EL M +G + + S++ +ING
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVING 207
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ R V P+T T L+DG C AR + +M KG + D +++
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNA 343
Query: 61 LING 64
L++G
Sbjct: 344 LMDG 347
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M G +P+ T L+DGFC D A +LL SM K + + ++ILI
Sbjct: 426 EALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILI 485
Query: 63 NG 64
G
Sbjct: 486 EG 487
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++RG+ P+ T N+++ GFC + + A L M + + + +IL++G
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T + L+DG+CLA + D A +LL SM S G K D +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 63 NG 64
NG
Sbjct: 557 NG 558
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ PD T N L++G+C R + A L M S G D +++I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 61 LING 64
++ G
Sbjct: 590 ILQG 593
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T N+LMD C R AR++ SM +G K + ++ L+
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 63 NGGSAR 68
G + +
Sbjct: 347 QGYATK 352
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G M+ RG+ P+ T ++++ C A D+A E+L SM G + +++
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 61 LING 64
+++G
Sbjct: 275 IVHG 278
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+++A E MI ++P N+L+ C+ D++D+A+EL++ M +G C F +S
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 60 IL 61
I+
Sbjct: 485 II 486
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSHSILING 64
M Q G P+ + N L+ G C +R A ELL M G C D S++ +ING
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV P+ T N+++ G+C + + A L M S G + D +++
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 61 LIN 63
L++
Sbjct: 310 LMD 312
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L M+ RG+ DT N+++D C R + +L M G K D ++S L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 62 ING 64
I+G
Sbjct: 521 IDG 523
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 61 LING 64
+++G
Sbjct: 625 ILHG 628
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T + L+DG+CLA + D A +LL SM S G K D +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 63 NG 64
NG
Sbjct: 557 NG 558
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ PD T N L++G+C R + A L M S G D +++I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 61 LING 64
++ G
Sbjct: 590 ILQG 593
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T N+LMD C R AR++ SM +G K + ++ L+
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 63 NGGSAR 68
G + +
Sbjct: 347 QGYATK 352
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G M+ RG+ P+ T ++++ C A D+A E+L SM G + +++
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 61 LING 64
+++G
Sbjct: 275 IVHG 278
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+++A E MI ++P N+L+ C+ D++D+A+EL++ M +G C F +S
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 60 IL 61
I+
Sbjct: 485 II 486
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSHSILING 64
M Q G P+ + N L+ G C +R A ELL M G C D S++ +ING
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV P+ T N+++ G+C + + A L M S G + D +++
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 61 LIN 63
L++
Sbjct: 310 LMD 312
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L M+ RG+ DT N+++D C R + +L M G K D ++S L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 62 ING 64
I+G
Sbjct: 521 IDG 523
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 61 LING 64
+++G
Sbjct: 625 ILHG 628
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T + L+DG+CLA + D A +LL SM S G K D +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 63 NG 64
NG
Sbjct: 557 NG 558
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ PD T N L++G+C R + A L M S G D +++I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 61 LING 64
++ G
Sbjct: 590 ILQG 593
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T N+LMD C R AR++ SM +G K + ++ L+
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 63 NGGSAR 68
G + +
Sbjct: 347 QGYATK 352
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G M+ RG+ P+ T ++++ C A D+A E+L SM G + +++
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 61 LING 64
+++G
Sbjct: 275 IVHG 278
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+++A E MI ++P N+L+ C+ D++D+A+EL++ M +G C F +S
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 60 IL 61
I+
Sbjct: 485 II 486
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSHSILING 64
M Q G P+ + N L+ G C +R A ELL M G C D S++ +ING
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV P+ T N+++ G+C + + A L M S G + D +++
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 61 LIN 63
L++
Sbjct: 310 LMD 312
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L M+ RG+ DT N+++D C R + +L M G K D ++S L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 62 ING 64
I+G
Sbjct: 521 IDG 523
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 61 LING 64
+++G
Sbjct: 625 ILHG 628
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T + L+DG+CLA + D A +LL SM S G K D +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 63 NG 64
NG
Sbjct: 557 NG 558
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ PD T N L++G+C R + A L M S G D +++I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 61 LING 64
++ G
Sbjct: 590 ILQG 593
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T N+LMD C R AR++ SM +G K + ++ L+
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 63 NGGSAR 68
G + +
Sbjct: 347 QGYATK 352
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G M+ RG+ P+ T ++++ C A D+A E+L SM G + +++
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 61 LING 64
+++G
Sbjct: 275 IVHG 278
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+++A E MI ++P N+L+ C+ D++D+A+EL++ M +G C F +S
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 60 IL 61
I+
Sbjct: 485 II 486
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSHSILING 64
M Q G P+ + N L+ G C +R A ELL M G C D S++ +ING
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV P+ T N+++ G+C + + A L M S G + D +++
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 61 LIN 63
L++
Sbjct: 310 LMD 312
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L M+ RG+ DT N+++D C R + +L M G K D ++S L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 62 ING 64
I+G
Sbjct: 521 IDG 523
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 61 LING 64
+++G
Sbjct: 625 ILHG 628
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ + M + GV P+ T N+LM G+ L AR+L M ++GCK D FS+SILI
Sbjct: 319 EAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILI 378
Query: 63 NG 64
NG
Sbjct: 379 NG 380
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L ++MI RG PD + + L++G+C+ R D A++L M +G + S++ LI
Sbjct: 354 EARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLI 413
Query: 63 NG 64
+
Sbjct: 414 HA 415
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G+ P T L++G C A F +A EL M ++GC+ D ++++ +ING
Sbjct: 152 VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIING 205
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI +G+ P+T + L+ FC + AREL M + G D ++S+
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446
Query: 61 LING 64
L+ G
Sbjct: 447 LLEG 450
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M+ RG PD T +++G C A L+ MG GC+ D ++S LI+
Sbjct: 187 MVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLID 239
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + G+ PD +++G C D A E M GC + FS+++
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNV 551
Query: 61 LING 64
+I G
Sbjct: 552 IIRG 555
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D L++ M G++P+T T N L++ FCL D +L + G + + + L
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167
Query: 62 ING 64
ING
Sbjct: 168 ING 170
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MIQR ++P+ T N+L++GFC+ DR D A+++ M SK C D +++ LI
Sbjct: 344 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 403
Query: 63 NG 64
G
Sbjct: 404 KG 405
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PDT T N L+ G L ++ A L+ M ++GC+ D F++
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226
Query: 61 LINGGSAR 68
++NG R
Sbjct: 227 VVNGLCKR 234
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + LM+ + PD T N L+ GFC A R + EL M +G + +++
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436
Query: 61 LING 64
LI G
Sbjct: 437 LIQG 440
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++G+C R A L+ M G K D + + LI+G
Sbjct: 142 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHG 195
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A + + + + ++++I+
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507
Query: 62 ING 64
I G
Sbjct: 508 IEG 510
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M + + + N ++DG C D A +L M +KG K D F+++
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296
Query: 61 LIN 63
LI+
Sbjct: 297 LIS 299
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E+MIQ G+ P+ T +L+ GFCL + A+EL VSM SKG + D S+++LI
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLI 349
Query: 63 NG 64
NG
Sbjct: 350 NG 351
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E + + G+ PD ++++ GFC + D+A L M GC D ++SI
Sbjct: 463 LETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSI 522
Query: 61 LING 64
L+ G
Sbjct: 523 LMRG 526
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 6 GLAEL--MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
GLA + +++RG PD T L+ G C+ R A +L + M GC + ++ LI
Sbjct: 145 GLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIK 204
Query: 64 G 64
G
Sbjct: 205 G 205
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 19 DTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
D T L+DG C A + + A EL + +G + DA ++S +I+G
Sbjct: 446 DIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHG 491
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T N+L++GFC+ DR D+A+++ M SK C D +++ LI
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369
Query: 63 NG 64
G
Sbjct: 370 KG 371
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M+ + PD T N L+ GFC + R + EL M +G D +++
Sbjct: 343 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 402
Query: 61 LING 64
LI G
Sbjct: 403 LIQG 406
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI++ +NP+ T NAL+D F +F A +L M + D F+++ L+
Sbjct: 275 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 334
Query: 63 NG 64
NG
Sbjct: 335 NG 336
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ + ++ +
Sbjct: 133 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 192
Query: 61 LINGGSAR 68
++NG R
Sbjct: 193 VVNGLCKR 200
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A E+ M K D + ++ +
Sbjct: 414 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 473
Query: 62 ING 64
I G
Sbjct: 474 IEG 476
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T N+L++GFC+ DR D+A+++ M SK C D +++ LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 63 NG 64
G
Sbjct: 408 KG 409
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M+ + PD T N L+ GFC + R + EL M +G D +++
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 61 LING 64
LI G
Sbjct: 441 LIQG 444
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI++ +NP+ T NAL+D F +F A +L M + D F+++ L+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 63 NG 64
NG
Sbjct: 373 NG 374
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ + ++ +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 61 LINGGSAR 68
++NG R
Sbjct: 231 VVNGLCKR 238
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A E+ M K D + ++ +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 62 ING 64
I G
Sbjct: 512 IEG 514
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T N L+DG CLA + D A +LL SM S G K D ++ LI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558
Query: 63 NG 64
NG
Sbjct: 559 NG 560
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ GV PD T L++G+C R D A L M S G + +++I
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 61 LING 64
++ G
Sbjct: 592 ILQG 595
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D+A E MI G+ P+ +L+ G C D++D+A EL++ M +G C F +S
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 60 IL 61
I+
Sbjct: 487 II 488
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M+ GV+P+ T N ++ G R A+EL VS+ G + + +++I
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626
Query: 61 LING 64
+++G
Sbjct: 627 ILHG 630
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M+ RG+ PD T ++++ C A D+A E+L +M G D +++ +
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 62 ING 64
++G
Sbjct: 278 LHG 280
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV PD T N+++ G+C + + A L M S G + + ++S
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311
Query: 61 LIN 63
L+N
Sbjct: 312 LMN 314
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T N L+DG CLA + D A +LL SM S G K D ++ LI
Sbjct: 332 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 391
Query: 63 NG 64
NG
Sbjct: 392 NG 393
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ GV PD T L++G+C R D A L M S G + +++I
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424
Query: 61 LING 64
++ G
Sbjct: 425 ILQG 428
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M+ GV+P+ T N ++ G R A+EL VS+ G + + +++I
Sbjct: 400 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 459
Query: 61 LING 64
+++G
Sbjct: 460 ILHG 463
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV PD T N+++ G+C + + A L M S G + + ++S
Sbjct: 225 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 284
Query: 61 LIN 63
L+N
Sbjct: 285 LMN 287
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T N L+DG CLA + D A +LL SM S G K D ++ LI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558
Query: 63 NG 64
NG
Sbjct: 559 NG 560
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ GV PD T L++G+C R D A L M S G + +++I
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 61 LING 64
++ G
Sbjct: 592 ILQG 595
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D+A E MI G+ P+ +L+ G C D++D+A EL++ M +G C F +S
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 60 IL 61
I+
Sbjct: 487 II 488
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M+ GV+P+ T N ++ G R A+EL VS+ G + + +++I
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626
Query: 61 LING 64
+++G
Sbjct: 627 ILHG 630
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M+ RG+ PD T ++++ C A D+A E+L +M G D +++ +
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 62 ING 64
++G
Sbjct: 278 LHG 280
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV PD T N+++ G+C + + A L M S G + + ++S
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311
Query: 61 LIN 63
L+N
Sbjct: 312 LMN 314
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M ++G P+ T NALMDG+CL ++ D A+++L M KGC S++I
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNI 377
Query: 61 LINGGSARIR 70
LING R R
Sbjct: 378 LINGYCKRRR 387
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + ++M+ +G P + N L++G+C R D A+ LLV M K D ++S
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412
Query: 61 LING 64
L+ G
Sbjct: 413 LMQG 416
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M ++ + PDT T + LM G C R A L M S G D ++S
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447
Query: 61 LING 64
L++G
Sbjct: 448 LLDG 451
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M++RG PD + + +++G C + A +LL M KGCK + +++
Sbjct: 178 IKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTT 237
Query: 61 LIN 63
+I+
Sbjct: 238 IID 240
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M+ R V P+T T L+DG C AR + +M KG + +A++++
Sbjct: 283 LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342
Query: 61 LING 64
L++G
Sbjct: 343 LMDG 346
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M G+ PD T + L+DG C D A +LL SM + D ++ILI
Sbjct: 425 EALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILI 484
Query: 63 NG 64
G
Sbjct: 485 EG 486
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G+ PD T N L++G C+ A L M +G + D S+S +ING
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVING 206
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + PD N L++G +A + + A+EL + + G + +++I
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517
Query: 61 LING 64
+I G
Sbjct: 518 MIKG 521
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ RG+ PD T + ++ GFC + A L M + + + +I
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307
Query: 61 LING 64
L++G
Sbjct: 308 LVDG 311
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + M+ RGV PDT T N++MDG C A +F+RA LL M + C+ +++ L
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 337
Query: 62 ING 64
I+G
Sbjct: 338 ISG 340
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M++RG P T ALM+G C R D A + M SK C DA ++
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511
Query: 61 LING 64
L+NG
Sbjct: 512 LVNG 515
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + E M RG P+ T N +MDG C + D A L SM S GC D S++I
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613
Query: 61 LING 64
+I+G
Sbjct: 614 IIDG 617
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +G P+ T N L+DG C A + ++A ELL S+ S G D +++I
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTI 441
Query: 61 LING 64
+++G
Sbjct: 442 IVDG 445
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L LM+QRG +P T N ++ C D+ D+A EL M +G + S+++
Sbjct: 833 LDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 892
Query: 61 LING 64
LI G
Sbjct: 893 LIYG 896
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + MIQ G+ PD T N LM FC +RFD A +L +M G D +++ LI
Sbjct: 626 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 685
Query: 63 NGGS 66
+G S
Sbjct: 686 SGLS 689
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + + G PD T + L DG C R D A EL+ M KGC + +++
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406
Query: 61 LING 64
LI+G
Sbjct: 407 LIDG 410
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A+ L +M +R P T N L+ G C DRA++L+ S G D ++SI
Sbjct: 312 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSI 371
Query: 61 LINGGSARIR 70
L +G R R
Sbjct: 372 LADGLCKRGR 381
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +R V PD T N L+DG C A + D+A E+L M +G D + + +++G
Sbjct: 252 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 305
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L E ++ G PD T ++DG C R D+A +++ M +GC +++ L
Sbjct: 418 EKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 477
Query: 62 ING 64
+ G
Sbjct: 478 MEG 480
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC 51
D+A G+ + MI+ GV+PD T N L+ G +R A EL+ M GC
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P NALMDG+C R D + M +GC + +++I+++G
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 582
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+PD NA++ G C + D A E L M + D F+++ILI+G
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDG 270
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLA-ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+D A+ LA E++ +G+ + T N L+D F R D A LL M +GC +++
Sbjct: 797 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856
Query: 60 ILIN 63
++I
Sbjct: 857 MVIT 860
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M++ + P T T N+++DGFC DR D A+ +L SM SKGC D + S LI
Sbjct: 98 EAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLI 157
Query: 63 NG 64
NG
Sbjct: 158 NG 159
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M +G +PD T + L++G+C A R D E+ M +G + +++
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 61 LING 64
LI+G
Sbjct: 191 LIHG 194
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L M ++G+ P+ T N ++D FC + R+ A +LL M K D + S LIN
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 64 G 64
Sbjct: 89 A 89
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M R NPD T A++DGFC R D A+++L M GCK + S++
Sbjct: 423 MDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTA 482
Query: 61 LING 64
L+NG
Sbjct: 483 LLNG 486
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+++A E M G+ PD T N+L+ G+C +R + A EL+ + SKGC D S+
Sbjct: 282 LEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSY 339
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + +G + D +A++ FC R D A+ L++ M S+ C D +++ +
Sbjct: 389 DDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAI 448
Query: 62 ING 64
++G
Sbjct: 449 VDG 451
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + G P+T + AL++G C + + ARE++ +A ++ +
Sbjct: 458 IDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGV 517
Query: 61 LING 64
+++G
Sbjct: 518 VMHG 521
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella
moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella
moellendorffii]
Length = 707
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + M+ RGV PDT T N++MDG C A +F+RA LL M + C+ +++ L
Sbjct: 27 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 86
Query: 62 ING 64
I+G
Sbjct: 87 ISG 89
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M++RG P T ALM+G C R D A + M SK C DA ++
Sbjct: 201 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 260
Query: 61 LING 64
L+NG
Sbjct: 261 LVNG 264
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L ELM+QRG +P T N ++ C D+ D+A EL M +G + S+++
Sbjct: 582 LDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 641
Query: 61 LING 64
LI G
Sbjct: 642 LIYG 645
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + E M RG P+ T N +MDG C + D A L SM S GC D S++I
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362
Query: 61 LING 64
+I+G
Sbjct: 363 IIDG 366
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + MIQ G+ PD T N LM FC +RFD A +L +M G D +++ LI
Sbjct: 375 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 434
Query: 63 NGGS 66
+G S
Sbjct: 435 SGLS 438
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+ T N L+DG C A + ++A ELL ++ S G D +++I
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTI 190
Query: 61 LING 64
+++G
Sbjct: 191 IVDG 194
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + + G PD T + L DG C R D A EL+ M GC + +++
Sbjct: 96 VDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNT 155
Query: 61 LING 64
LI+G
Sbjct: 156 LIDG 159
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L E ++ G PD T ++DG C R D+A +++ M +GC +++ L
Sbjct: 167 EKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 226
Query: 62 ING 64
+ G
Sbjct: 227 MEG 229
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +R V PD T N L+DG C A + D+A E+L M +G D + + +++G
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 54
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A+ L +M +R P T N L+ G C DRA+ L+ S G D ++SIL
Sbjct: 62 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSIL 121
Query: 62 INGGSARIR 70
+G R R
Sbjct: 122 ADGLCKRGR 130
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC 51
D+A G+ + MI+ GV+PD T N L+ G +R A EL+ M GC
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P NALMDG+C R D + M +GC + +++I+++G
Sbjct: 284 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 331
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLA-ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+D A+ LA E++ +G+ + T N L+D F R D A LL M +GC +++
Sbjct: 546 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYN 605
Query: 60 ILIN 63
++I
Sbjct: 606 MVIT 609
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M++ + P T T N+++DGFC DR D A+ +L SM SKGC D + S
Sbjct: 141 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 200
Query: 61 LING 64
LING
Sbjct: 201 LING 204
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M +G +PD T + L++G+C A R D E+ M +G + +++
Sbjct: 176 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 235
Query: 61 LING 64
LI+G
Sbjct: 236 LIHG 239
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L M ++G+ P+ T N ++D FC + R+ A +LL M K D + S LIN
Sbjct: 74 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 133
Query: 64 G 64
Sbjct: 134 A 134
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA E M+ RG+ PD T +L++GFCL D A+EL +SM SKG + D S+++LI
Sbjct: 290 EAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLI 349
Query: 63 NG 64
G
Sbjct: 350 YG 351
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E + Q G+ PD T +++GFC + D A L M GC + ++S
Sbjct: 463 LETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSA 522
Query: 61 LING 64
L++G
Sbjct: 523 LLHG 526
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++RG PD T +L+ G C+ R A L + M GC + ++ LI G
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKG 205
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 19 DTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
D + N L+DG C A + + A EL + +G + D ++ I+ING
Sbjct: 446 DIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMING 491
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA GL + M+++G P+ +AL+DG C + D A+E+L M +KGC +AF++S L
Sbjct: 380 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 439
Query: 62 ING 64
I G
Sbjct: 440 IKG 442
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+ IQ+ PD T LMDG C DR D A LL M +GC + + ++LING
Sbjct: 213 EMAIQK-CEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLING 267
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M L + M +G P+ T N +++G CL + D+A LL M + C + ++
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333
Query: 61 LING 64
LING
Sbjct: 334 LING 337
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P + T N L++G C R +L+ +M KGC + +++
Sbjct: 239 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298
Query: 61 LING 64
+ING
Sbjct: 299 IING 302
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MI+RGV P+ T NALMDG CL D A ++ +M KG D S+S LI
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346
Query: 63 NG 64
NG
Sbjct: 347 NG 348
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + + ++PD ++DG C A + AR+L ++ SKG + ++++I
Sbjct: 425 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 484
Query: 61 LING 64
+ING
Sbjct: 485 MING 488
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ +G PD + + L++G+C R ++A L M K + ++S
Sbjct: 320 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 379
Query: 61 LING 64
L++G
Sbjct: 380 LMHG 383
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MI+RGV P+ T NALMDG CL D A ++ +M KG D S+S LI
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355
Query: 63 NG 64
NG
Sbjct: 356 NG 357
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + + ++PD ++DG C A + AR+L ++ SKG + ++++I
Sbjct: 434 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 493
Query: 61 LING 64
+ING
Sbjct: 494 MING 497
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ +G PD + + L++G+C R ++A L M K + ++S
Sbjct: 329 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 388
Query: 61 LING 64
L++G
Sbjct: 389 LMHG 392
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ + ++MI+RGV PD T ALMDG CL D A ++ +M KGC + S++ILIN
Sbjct: 379 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 438
Query: 64 G 64
G
Sbjct: 439 G 439
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ +G P+ + N L++G+C R D+A LL M +G D +++
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470
Query: 61 LING 64
LI+G
Sbjct: 471 LIHG 474
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A GL E M +G+ DT T N L+ G C R A L M + G D ++ I
Sbjct: 446 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 505
Query: 61 LIN 63
L++
Sbjct: 506 LLD 508
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G+ PD T N ++ G C D A +L M GC +D ++ +I G
Sbjct: 564 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRG 614
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + I G PD T LM+G C A LL SM K C+ + +++ +I
Sbjct: 238 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 297
Query: 63 N 63
+
Sbjct: 298 D 298
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ PD T N L++ FC R A +L + GC+ D + + LI G
Sbjct: 180 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRG 229
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
++ D N +DG C A + AR+L ++ SKG + D +++I+I+G R
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKR 583
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M ++GV P+ T NALM+G+CL + + AR++ M KGC D S++I
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518
Query: 61 LING 64
LING
Sbjct: 519 LING 522
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + E+M+ +G PD + N L++G+C + R D+A+ LL M K + +++
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553
Query: 61 LING 64
++ G
Sbjct: 554 IMKG 557
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L M + + P+T T N +M G C R A+EL M S G ++SI
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588
Query: 61 LING 64
L+NG
Sbjct: 589 LLNG 592
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ R V P+T T + L+DG C AR + +M KG + + ++++
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 61 LINGGSARIR 70
L+NG R +
Sbjct: 484 LMNGYCLRCK 493
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D + L+E M+ RG+ PD T N+++ G C + + A L M GCK D +++I+
Sbjct: 251 DAMDFLSE-MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309
Query: 62 IN 63
I+
Sbjct: 310 ID 311
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ L+E M+ +G+ PD T ++ G C + + A L M KGCK D +++ +
Sbjct: 321 DAADFLSE-MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI 379
Query: 62 IN 63
I+
Sbjct: 380 ID 381
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG+ P+ T + ++ GFC + D A +L M + + + SIL++G
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG 452
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M Q+G PD N ++D C + A E L M +G +A ++S
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 61 LING 64
+++G
Sbjct: 414 ILHG 417
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G+ PD T L++G C + A EL M G + D S++ LING
Sbjct: 154 MFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLING 207
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M G+ P T + L++G C D A +L SM K + D ++ILI
Sbjct: 566 DAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625
Query: 63 NG 64
G
Sbjct: 626 EG 627
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G+ + M + GV PD T ++LM G+ L AR+L +M +KGCK DAFS++I
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380
Query: 61 LING 64
LI G
Sbjct: 381 LIKG 384
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI +G+ PD N L+ G C R A++L +M S G D F++S+
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450
Query: 61 LING 64
L++G
Sbjct: 451 LLDG 454
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI +G PD + N L+ G+C A R D A++L M +G D +++ LI
Sbjct: 358 EARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLI 417
Query: 63 NG 64
+G
Sbjct: 418 HG 419
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G+ PD T N L++G C +F +A E + GC+ ++++
Sbjct: 146 VDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTT 205
Query: 61 LING 64
+ING
Sbjct: 206 IING 209
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+EL +Q G+ P+ +++ C D A E +M GC D FS++++I G
Sbjct: 503 FSELFVQ-GLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRG 559
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL + M + G P+ T N L+D C + A ++ M +K D F+++ LI
Sbjct: 219 AAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQ 278
Query: 64 G 64
G
Sbjct: 279 G 279
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+G+ ELM +RG ++ CN L+DGF + D A ++ M KGC S++I
Sbjct: 442 LDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNI 501
Query: 61 LING 64
LING
Sbjct: 502 LING 505
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + E M+ RGV PD TCNA+++G C A + EL MG K ++ S++I +
Sbjct: 308 ARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMG-KCSLRNVRSYNIFLK 366
Query: 64 G 64
G
Sbjct: 367 G 367
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ + M + GV P+ T ++LM+G+ L AR+L M +KGCK D FS++ILI
Sbjct: 350 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILI 409
Query: 63 NG 64
NG
Sbjct: 410 NG 411
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L ++MI +G PD + N L++G+C A R A++L M +G D S++ LI
Sbjct: 385 EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 444
Query: 63 NG 64
+G
Sbjct: 445 DG 446
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L MI +G+ PD + N L+DG C R A +L +M + G D ++SIL+
Sbjct: 420 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 479
Query: 63 NG 64
+G
Sbjct: 480 DG 481
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M+ RG PD T +++G C A L MG GC+ D ++S +I
Sbjct: 210 QAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTII 269
Query: 63 N 63
+
Sbjct: 270 D 270
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + +G+ P+ +++G C D A E +M GC + FS+++
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582
Query: 61 LING 64
+I G
Sbjct: 583 IIRG 586
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G+ T N L++G C +F +A EL M ++G + D +++ +ING
Sbjct: 183 IIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIING 236
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL M + G PD T + ++D C R + A ++ M +KG + F+++ LI
Sbjct: 246 AAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ 305
Query: 64 G 64
G
Sbjct: 306 G 306
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L + M+ G PD T + L+DGFC +A L +M S K + ++I
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512
Query: 61 LING 64
LI+
Sbjct: 513 LIDA 516
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M +G++P+ T N+L+ G C R+ A +L M S + + S+
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 337
Query: 61 LIN 63
LIN
Sbjct: 338 LIN 340
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + + MIQRGV P+ T ALMDG CL D A ++ +M KGC + S++ LI
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348
Query: 63 NG 64
NG
Sbjct: 349 NG 350
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + + ++PD N +DG C A + AR+L ++ SKG + D +++SI+I
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542
Query: 63 NG 64
NG
Sbjct: 543 NG 544
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ +G P+ + N L++G+C R D+A L M + D ++S
Sbjct: 376 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 435
Query: 61 LING 64
LI+G
Sbjct: 436 LIHG 439
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 19/83 (22%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDR-------------------ARE 41
MDEA + + M+ +G P+ + N L++G+C R D+ A +
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381
Query: 42 LLVSMGSKGCKQDAFSHSILING 64
+ +M KGC + S++ LING
Sbjct: 382 VFDTMVCKGCMPNVISYNTLING 404
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI G PD T L++G C A LL SM K C+ + F+++ +I
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208
Query: 63 NG 64
+
Sbjct: 209 DS 210
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT+T L+ G C+ + A L M +G + D ++ LING
Sbjct: 122 ILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLING 175
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + + MIQRGV P+ T ALMDG CL D A ++ +M KGC + S++ LI
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348
Query: 63 NG 64
NG
Sbjct: 349 NG 350
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + + ++PD N +DG C A + AR+L ++ SKG + D +++SI+I
Sbjct: 429 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 488
Query: 63 NG 64
NG
Sbjct: 489 NG 490
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ +G P+ + N L++G+C R D+A L M + D ++S
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 381
Query: 61 LING 64
LI+G
Sbjct: 382 LIHG 385
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI G PD T L++G C A LL SM K C+ + F+++ +I
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208
Query: 63 NG 64
+
Sbjct: 209 DS 210
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ + ++MI+RGV PD T ALMDG CL D A ++ +M KGC + S++ILIN
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Query: 64 G 64
G
Sbjct: 787 G 787
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MI RGV P+ T NALMDG CL + D A ++ +M K C + S++ LI
Sbjct: 238 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 297
Query: 63 NG 64
NG
Sbjct: 298 NG 299
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ +G P+ + N L++G+C R D+A LL M +G D +++
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 818
Query: 61 LING 64
LI+G
Sbjct: 819 LIHG 822
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + +PD ++DG C A + AR+L ++ SKG + + ++++I
Sbjct: 376 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 435
Query: 61 LING 64
+I+G
Sbjct: 436 MIHG 439
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A GL E M +G+ DT T N L+ G C R A L M + G D ++ I
Sbjct: 794 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853
Query: 61 LIN 63
L++
Sbjct: 854 LLD 856
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + + ++ D N +DG C A + AR+L ++ SKG + D +++I
Sbjct: 864 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNI 923
Query: 61 LINGGSAR 68
+I+G R
Sbjct: 924 MIHGLCKR 931
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L MI RG+ PDT T N+L+DGFC + A ++ M SKGC+ D ++SILI
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 63 N 63
N
Sbjct: 393 N 393
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM+ +G PD T + L++ +C A R D L + SKG + +++
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 61 LING 64
L+ G
Sbjct: 426 LVLG 429
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G+ P+T T N L+ GFC + + + A+EL M S+G ++ IL++G
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +GV PD T N ++ G C A L M GC D F+++I
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 61 LIN---GGSARI 69
LI GGS I
Sbjct: 566 LIRAHLGGSGLI 577
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ + MI R + PD T +AL+D F + A+EL M ++G D +++ L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 62 ING 64
I+G
Sbjct: 357 IDG 359
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G PDT T + L++GFCL R A L+ M + D + S LING
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ PD T + L++G CL R A L+ M G + D ++
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 61 LIN 63
++N
Sbjct: 216 VLN 218
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L MI RG+ PDT T N+L+DGFC + A ++ M SKGC+ D ++SILI
Sbjct: 362 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 421
Query: 63 N 63
N
Sbjct: 422 N 422
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM+ +G PD T + L++ +C A R D L + SKG + +++
Sbjct: 395 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 454
Query: 61 LING 64
L+ G
Sbjct: 455 LVLG 458
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G+ P+T T N L+ GFC + + + A+EL M S+G ++ IL++G
Sbjct: 443 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +GV PD T N ++ G C A L M GC D F+++I
Sbjct: 535 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 594
Query: 61 LIN---GGSARI 69
LI GGS I
Sbjct: 595 LIRAHLGGSGLI 606
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ + MI R + PD T +AL+D F + A+EL M ++G D +++ L
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385
Query: 62 ING 64
I+G
Sbjct: 386 IDG 388
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G PDT T + L++GFCL R A L+ M + D + S LING
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 213
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ PD T + L++G CL R A L+ M G + D ++
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244
Query: 61 LIN 63
++N
Sbjct: 245 VLN 247
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + M++RG+ P T T N+++DGFC DR + A+ +L SM SK C D + S
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 61 LING 64
LING
Sbjct: 222 LING 225
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M + +PD T + L++G+C A R D E+ M +G + +++
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 61 LING 64
LI+G
Sbjct: 257 LIHG 260
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L M +G+ PD T + ++D FC + R+ A +LL M + D + S LI
Sbjct: 94 HAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI 153
Query: 63 NG 64
N
Sbjct: 154 NA 155
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +M++RG PDT T LM G+CL D+ D AR L M +G D +S++ILI
Sbjct: 301 EARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILI 360
Query: 63 NG 64
G
Sbjct: 361 KG 362
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +MI+RG D N LM+G+CL ++ AR+L M +G + D +++I
Sbjct: 264 VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323
Query: 61 LING 64
L++G
Sbjct: 324 LMHG 327
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 16/80 (20%)
Query: 1 MDEANGLAELMIQRGVNPDTST--------CNA--------LMDGFCLADRFDRARELLV 44
++EA L MI +G+ PD T C A L++GFCL ++ D AREL
Sbjct: 213 INEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFN 272
Query: 45 SMGSKGCKQDAFSHSILING 64
M +G + D +++IL+NG
Sbjct: 273 VMIERGEQHDIINYNILMNG 292
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI+RG+ PD + N L+ G+C +R A LL M K + +++
Sbjct: 334 VDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNS 393
Query: 61 LING 64
+++G
Sbjct: 394 VVDG 397
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M + + PD T N L+D + D+A LLV + +G + +++I
Sbjct: 476 LDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNI 535
Query: 61 LING 64
LING
Sbjct: 536 LING 539
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M+ RG+ PDT T ++L+DGFC +R A ++L M SKGC+ + ++SILI
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391
Query: 63 N 63
N
Sbjct: 392 N 392
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN + +LM+ +G P+ T + L++ +C A R D L + SKG D +++ L+
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426
Query: 63 NG 64
G
Sbjct: 427 QG 428
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G+ DT T N L+ GFC + + + A+EL M S+G ++ IL++G
Sbjct: 413 KGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ P+ T N L++G CL R A L+ M GC+ + ++
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214
Query: 61 LIN 63
++N
Sbjct: 215 VLN 217
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI R + P+ T +AL+D F + A+EL M ++G D ++S LI+G
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDG 358
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA ++E M ++G P+ T NALMDG+CL ++ D A ++L M KGC + S++I
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381
Query: 61 LING 64
LING
Sbjct: 382 LING 385
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + +MI +G P+ S+ N L++G+C + R + A+ LL M K D ++S
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416
Query: 61 LING 64
L+ G
Sbjct: 417 LMQG 420
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ R V PDT T N L+DG C AR + +M KG + +A++++
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346
Query: 61 LING 64
L++G
Sbjct: 347 LMDG 350
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L M ++ + PDT T + LM G C R A L M S G D ++SI
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451
Query: 61 LING 64
L++G
Sbjct: 452 LLDG 455
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA M+ RG+ PD T N ++ GFC + + A L M + D + +I
Sbjct: 252 VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNI 311
Query: 61 LING 64
L++G
Sbjct: 312 LVDG 315
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +R + P+ L+ G +A + + A+EL + + G + D +++++
Sbjct: 462 LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNV 521
Query: 61 LING 64
+I G
Sbjct: 522 MIKG 525
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M G+ PD + L+DGFC D A +LL M + K + ++ILI
Sbjct: 429 EALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILI 488
Query: 63 NG 64
G
Sbjct: 489 RG 490
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G+ PD T N L++G C + A L M G + + S++ +ING
Sbjct: 157 MFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVING 210
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV P+ T + L+DG+CLA + D A +LL SM S G K D +++ LI
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 63 NG 64
NG
Sbjct: 557 NG 558
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ PD T N L++G+C R + A L M S G D +++I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 61 LING 64
++ G
Sbjct: 590 ILQG 593
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T N+LMD C R AR++ SM +G K + ++ L+
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 63 NGGSAR 68
G + +
Sbjct: 347 QGYATK 352
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G M+ RG+ P+ T N+++ C A D+A E+L SM G + +++
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 61 LING 64
+++G
Sbjct: 275 IVHG 278
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+++A E MI ++P N+L+ C+ D++D+A+EL++ M +G C F +S
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 60 IL 61
I+
Sbjct: 485 II 486
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSHSILING 64
M Q G P+ + N L+ G C +R A ELL M G C D S++ +ING
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV P+ T N+++ G+C + + A L M S G + D +++
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 61 LIN 63
L++
Sbjct: 310 LMD 312
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624
Query: 61 LING 64
+++G
Sbjct: 625 ILHG 628
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + M++RG+ P T T N+++DGFC DR + A+ +L SM SK C D + S
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 61 LING 64
LING
Sbjct: 222 LING 225
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M + +PD T + L++G+C A R D E+ M +G + +++
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 61 LING 64
LI+G
Sbjct: 257 LIHG 260
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L M +G+ PD T + ++D FC + R+ A +LL M + D + S LI
Sbjct: 94 HAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI 153
Query: 63 NG 64
N
Sbjct: 154 NA 155
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L MI RG+ P+T T N+L+ G C R D A +++ M SKGC D ++++I
Sbjct: 351 LTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410
Query: 61 LING 64
LING
Sbjct: 411 LING 414
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + +LM+ +G +PD T N L++GFC A + D L M +G D ++S
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445
Query: 61 LING 64
LI G
Sbjct: 446 LIQG 449
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ PD T N +++G CL DR A +L+ M + GC+ + F++ ++
Sbjct: 178 EAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPIL 237
Query: 63 N 63
N
Sbjct: 238 N 238
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ + M + + D N ++ G C A++ D A L S+ SKG K+D S++I
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550
Query: 61 LINGGSAR 68
+++G R
Sbjct: 551 MLSGLCKR 558
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RG+ DT T + L+ GFC + + A+++ M S+G +++I
Sbjct: 421 VDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAI 480
Query: 61 LING 64
L++G
Sbjct: 481 LLDG 484
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L ELM++ GV P+ T N L++G+CLA + D A +LL M S G K + ++S LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 63 NG 64
NG
Sbjct: 554 NG 555
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ P+T T + L++G+C R + A L M S G D +++I
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 61 LING 64
++ G
Sbjct: 587 ILQG 590
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M+ RG+ PD T N+++ C A D+A E+L +M G D +++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 62 ING 64
++G
Sbjct: 273 LHG 275
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV PD T N+++ G+C + + A L M S G + D ++S+
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 61 LIN 63
L++
Sbjct: 307 LMD 309
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSIL 61
E MI G++P N+L+ G C ++++RA EL++ M +G C F +SI+
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T + LMD C R AR++ SM +G K + ++ L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 63 NGGSAR 68
G + +
Sbjct: 344 QGYATK 349
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L + M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 61 LING 64
+++G
Sbjct: 622 ILHG 625
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T N+++DG C R D A ++ SMGSKG D + + LI
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581
Query: 63 NG 64
NG
Sbjct: 582 NG 583
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M+ RG+ P+T T N+++DGF +R D A + M +KGC D + SILI
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395
Query: 63 NG--GSARI 69
+G G+ R+
Sbjct: 396 DGYCGAKRV 404
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +PD T + L+DG+C A R D +LL M +G + +++
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428
Query: 61 LING 64
LI+G
Sbjct: 429 LIHG 432
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M ++G++P+ T N +++GFC + R+ A+ LL M + D + S+LI
Sbjct: 266 DAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLI 325
Query: 63 NG 64
N
Sbjct: 326 NA 327
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M +G +PD T L++G+C R E+ MG +G +A ++
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 61 LING 64
LI+G
Sbjct: 615 LIHG 618
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + MI GV P+ TCN L+DG C + A E+ M DA SH
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDA-SHPF 497
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L ELM++ GV P+ T N L++G+CLA + D A +LL M S G K + ++S LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 63 NG 64
NG
Sbjct: 554 NG 555
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ P+T T + L++G+C R + A L M S G D +++I
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 61 LING 64
++ G
Sbjct: 587 ILQG 590
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M+ RG+ PD T N+++ C A D+A E+L +M G D +++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 62 ING 64
++G
Sbjct: 273 LHG 275
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV PD T N+++ G+C + + A L M S G + D ++S+
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 61 LIN 63
L++
Sbjct: 307 LMD 309
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSIL 61
E MI G++P N+L+ G C ++++RA EL++ M +G C F +SI+
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T + LMD C R AR++ SM +G K + ++ L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 63 NGGSAR 68
G + +
Sbjct: 344 QGYATK 349
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L + M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 61 LING 64
+++G
Sbjct: 622 ILHG 625
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L E MI+R ++PD T + L+ G C+ R D A ++ M SKGC D ++SI
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331
Query: 61 LING 64
LING
Sbjct: 332 LING 335
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ +G PD T + L++G+C + + + +L M +G ++ ++++
Sbjct: 307 LDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTV 366
Query: 61 LING 64
LI G
Sbjct: 367 LIQG 370
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P+ N ++DG C + + D A +LL M G + DA +++ LI+G
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M G+ PD T N+L+ G C + R+D A ++ M + D F+ +
Sbjct: 202 VDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNA 261
Query: 61 LING 64
LI+
Sbjct: 262 LIDA 265
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI RG+ PDT T +L+DGFC + D+A +++ M SKGC + + +ILI
Sbjct: 449 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 508
Query: 63 NG 64
NG
Sbjct: 509 NG 510
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN + +LM+ +G +P+ T N L++G+C A+R D EL M +G D +++
Sbjct: 482 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 541
Query: 61 LING 64
LI G
Sbjct: 542 LIQG 545
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RGV DT T N L+ GFC + + A+EL M S+ + ++ I
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 576
Query: 61 LING 64
L++G
Sbjct: 577 LLDG 580
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PD T N L++G CL+ + A L+ M GC+ +A ++
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331
Query: 61 LIN 63
++N
Sbjct: 332 VLN 334
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G P+T T + L++G CL R A EL+ M G K D + + L+NG
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 300
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
D+ L MI+R +NP+ T + L+D F + A EL M +G D +++
Sbjct: 412 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 471
Query: 61 LING 64
LI+G
Sbjct: 472 LIDG 475
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++ G P+ T +++ C + + A ELL M + K DA +SI+I
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368
Query: 63 NG 64
+G
Sbjct: 369 DG 370
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M +G+ + T N L+ GFC A R+D +LL M + + + S+
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436
Query: 61 LIN 63
LI+
Sbjct: 437 LID 439
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MIQRGV PD T LMDG CL D A ++ M KG D S++ LI
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343
Query: 63 NG 64
NG
Sbjct: 344 NG 345
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + + +NPD N ++DG C A + AR+L ++ SKG ++++I
Sbjct: 422 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 481
Query: 61 LINGGSAR 68
+I+G R
Sbjct: 482 MIHGLCKR 489
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + ++M+++G PD + L++G+C + D+A L M K D +++
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 376
Query: 61 LING 64
L++G
Sbjct: 377 LMHG 380
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M ++ PDT T N LM G C R A L M ++G D ++SI
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 411
Query: 61 LIN 63
L++
Sbjct: 412 LLD 414
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV P+ T + L+DG+CLA + D A +LL SM S G K D +++ LI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553
Query: 63 NG 64
NG
Sbjct: 554 NG 555
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M G+ PD T N L++G+C R D A L M S G + +++I
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586
Query: 61 LING 64
++ G
Sbjct: 587 ILQG 590
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T N+LMD C R AR++ SM +G + D ++ L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343
Query: 63 NGGSAR 68
G + +
Sbjct: 344 QGYATK 349
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D+A E MI G+ P+ +L+ C+ D++D+A EL++ M +G C F +S
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 60 IL 61
I+
Sbjct: 482 II 483
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV P+ T N+++ G+C +++ A L M S G + D +++
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306
Query: 61 LI-----NGGSARIRK 71
L+ NG S RK
Sbjct: 307 LMDYLCKNGRSTEARK 322
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M+ GV+P+ T N ++ G R A+EL V + G + + +++I
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621
Query: 61 LING 64
+++G
Sbjct: 622 ILHG 625
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M+ R ++PD T ++++ C D+A E+L +M G + +++ +
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272
Query: 62 ING 64
++G
Sbjct: 273 LHG 275
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA GL + M+++G P+ +AL+DG C + D A+E+L M +KGC +AF++S L
Sbjct: 364 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 423
Query: 62 ING 64
I G
Sbjct: 424 IKG 426
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+ IQ+ PD T LMDG C DR D A LL M +GC + + ++LING
Sbjct: 197 EMAIQK-CEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLING 251
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M L + M +G P+ T N +++G CL + D+A LL M + C + ++
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 317
Query: 61 LING 64
LING
Sbjct: 318 LING 321
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P + T N L++G C R +L+ +M KGC + +++
Sbjct: 223 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 282
Query: 61 LING 64
+ING
Sbjct: 283 IING 286
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV P+ T + L+DG+CLA + D A +LL SM S G K D +++ LI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553
Query: 63 NG 64
NG
Sbjct: 554 NG 555
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M G+ PD T N L++G+C R D A L M S G + +++I
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586
Query: 61 LING 64
++ G
Sbjct: 587 ILQG 590
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T N+LMD C R AR++ SM +G + D ++ L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343
Query: 63 NGGSAR 68
G + +
Sbjct: 344 QGYATK 349
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D+A E MI G+ P+ +L+ C+ D++D+A EL++ M +G C F +S
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 60 IL 61
I+
Sbjct: 482 II 483
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV P+ T N+++ G+C +++ A L M S G + D +++
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306
Query: 61 LI-----NGGSARIRK 71
L+ NG S RK
Sbjct: 307 LMDYLCKNGRSTEARK 322
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M+ GV+P+ T N ++ G R A+EL V + G + + +++I
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621
Query: 61 LING 64
+++G
Sbjct: 622 ILHG 625
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M+ R ++PD T ++++ C D+A E+L +M G + +++ +
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272
Query: 62 ING 64
++G
Sbjct: 273 LHG 275
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T + L+DG+CLA + D A +LL M S G K + ++S LI
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 320
Query: 63 NG 64
NG
Sbjct: 321 NG 322
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ P+T T + L++G+C R + A L M S G D +++I
Sbjct: 294 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 353
Query: 61 LING 64
++ G
Sbjct: 354 ILQG 357
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L + M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 329 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 388
Query: 61 LING 64
+++G
Sbjct: 389 ILHG 392
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ + ++MI+RGV PD T ALMDG CL D A ++ +M KGC + S++ILIN
Sbjct: 341 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 400
Query: 64 G 64
G
Sbjct: 401 G 401
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ +G P+ + N L++G+C R D+A LL M +G D +++
Sbjct: 373 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 432
Query: 61 LING 64
LI+G
Sbjct: 433 LIHG 436
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A GL E M +G+ DT T N L+ G C R A L M + G D ++ I
Sbjct: 408 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 467
Query: 61 LIN 63
L++
Sbjct: 468 LLD 470
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + I G PD T LM+G C A LL SM K C+ + +++ +I
Sbjct: 200 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 259
Query: 63 N 63
+
Sbjct: 260 D 260
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L+ M G+ PD T N L++ FC R A +L + GC+ D + + LI G
Sbjct: 134 LSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRG 191
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E MI++GV P+ +T NALMDG+C + D A++L M KGC S++ILI
Sbjct: 205 EAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILI 264
Query: 63 NG 64
G
Sbjct: 265 KG 266
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL M + + PDT T + LM GFC R A++LL M S G D ++SI
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSI 332
Query: 61 LING 64
+++G
Sbjct: 333 VLDG 336
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L +M+++G P + N L+ G C + R D A+ LL M K D ++S
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297
Query: 61 LING 64
L+ G
Sbjct: 298 LMKG 301
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E M G+ PD T + ++DG C D A ELL +M + + F ++ILI
Sbjct: 310 DAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILI 369
Query: 63 NG 64
G
Sbjct: 370 QG 371
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + P+ L+ G C + + AREL ++ KG + D ++++
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402
Query: 61 LING 64
+I+G
Sbjct: 403 MISG 406
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA M+ RG++P+ T ++++ GFC R + A L M + D + +I
Sbjct: 133 ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192
Query: 61 LINGGS 66
L++G S
Sbjct: 193 LVDGLS 198
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++ G PD T + +++G C A +LL M KGCK + +S +I
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 63 N 63
+
Sbjct: 125 D 125
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T + L+DG+CLA + D A +LL M S G K + ++S LI
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 320
Query: 63 NG 64
NG
Sbjct: 321 NG 322
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ P+T T + L++G+C R + A L M S G D +++I
Sbjct: 294 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 353
Query: 61 LING 64
++ G
Sbjct: 354 ILQG 357
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L + M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 329 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 388
Query: 61 LING 64
+++G
Sbjct: 389 ILHG 392
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA E MI+R ++PD T + L+ G C+ R D A E+ M SKGC D ++SI
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 61 LING 64
LING
Sbjct: 332 LING 335
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ +G PD T + L++G+C + + + +L M +G ++ +++I
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 61 LING 64
LI G
Sbjct: 367 LIQG 370
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M + G+ PD T N+L+ G C + R+ A ++ M + D F+ +
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 61 LING 64
LI+
Sbjct: 262 LIDA 265
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M+ GV+P+ T N L+ G C + ++A +L M G D +++I
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 61 LING 64
+I G
Sbjct: 437 IIRG 440
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G P+ N ++DG C + + D A +LL M G D +++ LI+G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +G NPD T A++DGFC + D A+++L M GCK + ++++
Sbjct: 424 IDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTV 483
Query: 61 LING 64
L+NG
Sbjct: 484 LLNG 487
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A E M G+ PD + N L+ G+C R D A EL+ M KGC D S+
Sbjct: 283 LEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYT 342
Query: 61 LI 62
++
Sbjct: 343 VM 344
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++G + D +A++D FC D+A+ L++ M SKGC D +++ +I+G
Sbjct: 401 EKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDG 452
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A LA +++ +G+ PD T N L+ G CL+ D A E+ M +KGCK D F++SI
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408
Query: 61 LIN 63
LI+
Sbjct: 409 LID 411
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L + MI G+ PD T N+L+ FC ++A +++ +M S GC+ D F++
Sbjct: 489 VEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGT 548
Query: 61 LING 64
LI G
Sbjct: 549 LIGG 552
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + MI++G +PD T N+L+ G C F++A E+L M + C + +++
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338
Query: 61 LING 64
LI+
Sbjct: 339 LISA 342
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + E M +G PD T + L+D C R A LL M S GC ++A ++ L
Sbjct: 385 DIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444
Query: 62 ING 64
I+G
Sbjct: 445 IDG 447
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ G +PD T N+L++GFC + A +++ M KG D ++++ LI+G
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISG 307
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M GV+ + T N L+DG C R + A +L+ M +G K D F+++
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513
Query: 61 LIN 63
L+
Sbjct: 514 LLT 516
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M G PD T L+ G C A R D A +LL S+ KG +++
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNP 583
Query: 61 LINGGSARIR 70
+I R R
Sbjct: 584 VIQALFMRKR 593
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI RG+ PDT T +L+DGFC + D+A +++ M SKGC + + +ILI
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 63 NG 64
NG
Sbjct: 411 NG 412
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN + +LM+ +G +P+ T N L++G+C A+R D EL M +G D +++
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 61 LING 64
LI G
Sbjct: 444 LIQG 447
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RGV DT T N L+ GFC + + A+EL M S+ + ++ I
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 61 LING 64
L++G
Sbjct: 479 LLDG 482
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PD T N L++G CL+ + A L+ M GC+ +A ++
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 61 LIN 63
++N
Sbjct: 234 VLN 236
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G P+T T + L++G CL R A EL+ M G K D + + L+NG
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 202
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ L MI+R +NP+ T + L+D F + A EL M +G D +++ L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 62 ING 64
I+G
Sbjct: 375 IDG 377
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++ G P+ T +++ C + + A ELL M + K DA +SI+I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 63 NG 64
+G
Sbjct: 271 DG 272
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M +G+ + T N L+ GFC A R+D +LL M + + + S+
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 61 LIN 63
LI+
Sbjct: 339 LID 341
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + MI++GV+PD T N ++DG+ L + DRARE+ SM +K + D S++I
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358
Query: 61 LINGGSARIRK 71
LIN G AR +K
Sbjct: 359 LIN-GYARQKK 368
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ E + G++PD T A++ G+C D A+++L M GC D ++++
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533
Query: 61 LING 64
++ G
Sbjct: 534 IVRG 537
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
MI + P+ T N+++DG C + + A E++ M KG D +++++I+G R
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L LM Q P+T T ++D FC D A LL M K D F++S LI
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255
Query: 63 NG 64
+
Sbjct: 256 DA 257
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + Q+G+ P TCN L+ G R A+ M S G D ++H
Sbjct: 369 IDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCT 428
Query: 61 LING 64
L+ G
Sbjct: 429 LLGG 432
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + MI + + PD + N L++G+ + D A ++ + KG K + ++
Sbjct: 334 VDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393
Query: 61 LING 64
L++G
Sbjct: 394 LLHG 397
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ + M + GV PD T N+LM G+ + AR+L M +KGCK D FS+SILIN
Sbjct: 204 AEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILIN 263
Query: 64 G 64
G
Sbjct: 264 G 264
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L ++MI +G PD + + L++G+C A R D A++L M +G + S++ LI
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297
Query: 63 NG 64
+G
Sbjct: 298 HG 299
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI +G P+ + N L+ G C R A++L +M + G + ++++I
Sbjct: 271 IDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAI 330
Query: 61 LING 64
L++G
Sbjct: 331 LLDG 334
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I+ G+ P T L++G +F +A EL M ++GC+ D ++++ +ING
Sbjct: 37 IKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIING 89
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P+ +++G C D A E +M GC D FS++++I G
Sbjct: 390 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRG 439
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T N+L++GFC+ DR D+A+++ M SK C D +++ LI
Sbjct: 272 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331
Query: 63 NG 64
G
Sbjct: 332 KG 333
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M+ + PD T N L+ GFC + R + EL M +G D +++
Sbjct: 305 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364
Query: 61 LING 64
LI G
Sbjct: 365 LIQG 368
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI++ +NP+ T NAL+D F +F A +L M + D F+++ LI
Sbjct: 237 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296
Query: 63 NG 64
NG
Sbjct: 297 NG 298
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ + ++ +
Sbjct: 95 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 154
Query: 61 LINGGSAR 68
++NG R
Sbjct: 155 VVNGLCKR 162
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A E+ M K D + ++ +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435
Query: 62 ING 64
I G
Sbjct: 436 IEG 438
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 58.2 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MIQRGV PD T LMDG CL D A ++ M KG D S++ LI
Sbjct: 273 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 332
Query: 63 NGG 65
N G
Sbjct: 333 NAG 335
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T N+L++GFC+ DR D+A+++ M SK C D +++ LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 63 NG 64
G
Sbjct: 333 KG 334
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M+ + PD T N L+ GFC + R + EL M +G D +++
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 61 LING 64
LI G
Sbjct: 366 LIQG 369
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI++ +NP+ T NAL+D F +F A +L M + D F+++ LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 63 NG 64
NG
Sbjct: 298 NG 299
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ + ++ +
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 61 LINGGSAR 68
++NG R
Sbjct: 156 VVNGLCKR 163
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A E+ M K D + ++ +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 62 ING 64
I G
Sbjct: 437 IEG 439
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MIQRGV PD T LMDG CL D A ++ M KG D S++ LI
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 352
Query: 63 NG 64
NG
Sbjct: 353 NG 354
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + + +NPD N ++DG C A + AR+L ++ SKG ++++I
Sbjct: 431 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 490
Query: 61 LINGGSAR 68
+I+G R
Sbjct: 491 MIHGLCKR 498
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + ++M+++G PD + L++G+C + D+A L M K D +++
Sbjct: 326 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 385
Query: 61 LING 64
L+ G
Sbjct: 386 LMYG 389
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M ++ PDT T N LM G C R A L M ++G D ++SI
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 420
Query: 61 LIN 63
L++
Sbjct: 421 LLD 423
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M+ RG+ PD T NA++ G C +RA EL+ S+ SKGCK D S++I
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282
Query: 61 LI 62
L+
Sbjct: 283 LL 284
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA GL + M Q G P + N ++ G C R D A + M KGC+ + ++ +
Sbjct: 468 VEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYIL 527
Query: 61 LING 64
LI G
Sbjct: 528 LIEG 531
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ++MI++ + PDT + + L+ C R D A ++ M S GC D +++
Sbjct: 328 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 387
Query: 61 LI 62
++
Sbjct: 388 IL 389
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + +G PD + N L+ F ++D +L+ M S+GC+ + ++SI
Sbjct: 258 VERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 317
Query: 61 LIN 63
LI+
Sbjct: 318 LIS 320
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+ + E++ + PD NA++ GFC +R + A ++L M ++G D +++I
Sbjct: 119 IEKASRVMEIL-ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNI 177
Query: 61 LI 62
+I
Sbjct: 178 MI 179
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ MI +GV+PD T N+L+ C + A LL M G + S++I++
Sbjct: 436 ALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLL 495
Query: 64 G 64
G
Sbjct: 496 G 496
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++ ++PD T ++L++G CL DR D A ++ M SKGC D S++ LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 63 NG 64
NG
Sbjct: 338 NG 339
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + +LM+ +G D + N L++GFC A R + +L M +G + +++
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 61 LING 64
LI G
Sbjct: 371 LIQG 374
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PD NA++D C R + A + + KG + + +++
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 61 LING 64
L+NG
Sbjct: 231 LVNG 234
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ +T T N L+ GF A D+A+E M G D ++++IL+ G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T +L++GFC +R A L+ M G K D +++ +I+
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++ ++PD T ++L++G CL DR D A ++ M SKGC D S++ LI
Sbjct: 381 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 440
Query: 63 NG 64
NG
Sbjct: 441 NG 442
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++R ++P T ++L++GFC+ DR D A+++ M SK C D +++ LI
Sbjct: 958 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 1017
Query: 63 NG 64
G
Sbjct: 1018 KG 1019
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+ + PD T N L+ GFC R + E+ M +G + +++I
Sbjct: 991 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Query: 61 LING 64
LI G
Sbjct: 1051 LIQG 1054
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + +LM+ +G D + N L++GFC A R + +L M +G + +++
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473
Query: 61 LING 64
LI G
Sbjct: 474 LIQG 477
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M G P+T T N L+ G L ++ A L+ M +KGC+ D ++ +
Sbjct: 781 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 840
Query: 61 LINGGSAR 68
++NG R
Sbjct: 841 VVNGLCKR 848
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PD NA++D C R + A + + KG + + +++
Sbjct: 274 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 333
Query: 61 LING 64
L+NG
Sbjct: 334 LVNG 337
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ +T T N L+ GF A D+A+E M G D ++++IL+ G
Sbjct: 459 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M +G+ P+ T ++L+ C R+ A LL M + D F+ S
Sbjct: 886 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 945
Query: 61 LING 64
LI+
Sbjct: 946 LIDA 949
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M++ G PD T +L++GFC +R A L+ M G K D +++ +I+
Sbjct: 249 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++ ++PD T ++L++G CL DR D A ++ M SKGC D S++ LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 63 NG 64
NG
Sbjct: 338 NG 339
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + +LM+ +G D + N L++GFC A R + +L M +G + +++
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 61 LING 64
LI G
Sbjct: 371 LIQG 374
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PD NA++D C R + A + + KG + + +++
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 61 LING 64
L+NG
Sbjct: 231 LVNG 234
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ +T T N L+ GF A D+A+E M G D ++++IL+ G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T +L++GFC +R A L+ M G K D +++ +I+
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L +M+ +G+ P+ T +AL+DG C + +F A+E+L M ++G DAF++S
Sbjct: 265 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSA 324
Query: 61 LING 64
LI+G
Sbjct: 325 LIHG 328
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E M RGV PD T +AL+ G C AD+ + A ++L M GC D +S +I
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 361
Query: 63 NG 64
+
Sbjct: 362 HA 363
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M + G NPD T ++DG C R + A LL M GC + +++ LI
Sbjct: 443 EAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLI 502
Query: 63 NG 64
+G
Sbjct: 503 SG 504
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + MI+ G P+ T N+L+DGFC D AR+LL M +KG + + ++S LI+
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292
Query: 64 G 64
G
Sbjct: 293 G 293
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M + G P+ T L+ G C A + D A ++ M + GC + +++
Sbjct: 476 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 535
Query: 61 LING--GSARIRK 71
++NG S RI++
Sbjct: 536 MVNGLCVSGRIKE 548
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
EA + E M + G V PD T + +++G C +D A++LL M GC D +++ +
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466
Query: 62 ING 64
I+G
Sbjct: 467 IDG 469
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM--GSKGCKQDAFSH 58
+DEA + E M G P+ T N +++G C++ R A++L+ M G C DA ++
Sbjct: 511 VDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 570
Query: 59 SILING 64
++N
Sbjct: 571 RTIVNA 576
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD + N ++ GFC A A ELL M S G DAF+H+ +I
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITA 156
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A+ + E M+ +GV PD T + L+D FC A R D A ELL M S+GC + + +
Sbjct: 274 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 333
Query: 61 LING 64
+I+G
Sbjct: 334 IIDG 337
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E +++RG +PD T N L+D C A + AR L M S+GC + ++S+LING
Sbjct: 103 LFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLING 160
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++A+ L E M+ + + PD T AL+DG C A + + AR++L MG+ G + ++++
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 61 LING--GSARIRK 71
L++G S RI +
Sbjct: 439 LVHGLCKSGRIEE 451
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI G P+ T NAL++G C AD+ +RA ++ SM KG D ++S+L++
Sbjct: 249 MIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 302
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M RG P+ T N+++DG C +DR A ++ + + ++ D + +I
Sbjct: 309 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNI 368
Query: 61 LINGG 65
LI G
Sbjct: 369 LIAGA 373
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M RG P+ T + L++G C R D AREL+ M K C D + I
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC--DVLPNII 189
Query: 61 LIN 63
N
Sbjct: 190 TYN 192
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + +LM GV P+ T N L+ G C + R + E L M S GC ++ ++
Sbjct: 414 VEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGS 473
Query: 61 LI 62
L+
Sbjct: 474 LV 475
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E E M+ G P++ T +L+ C A R D A +L+ + S G D +++I
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508
Query: 61 LING 64
L++G
Sbjct: 509 LVDG 512
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA +A + R + PD T N L+ G C A F++A L M +K + D + LI
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405
Query: 63 NG 64
+G
Sbjct: 406 DG 407
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L + G +PDT T N L+DG + + ++A +L M KG + D+F+ +
Sbjct: 485 DDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 544
Query: 62 ING 64
G
Sbjct: 545 FGG 547
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +L+ GVNPD T + L+DG+CLA + D A +LL M S G K D+ ++S LI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364
Query: 63 NG 64
NG
Sbjct: 365 NG 366
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L M+ G+ PD+ T + L++G+C +R + A L M S G D +++I
Sbjct: 338 MDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNI 397
Query: 61 LING 64
+++G
Sbjct: 398 ILHG 401
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A G+ M G+ PD T N+LMD C + AR++ SM +G K D ++ L
Sbjct: 94 EKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTL 153
Query: 62 INGGSAR 68
++G +++
Sbjct: 154 LHGYASK 160
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M+ RG P+ TC ALM G+CL D AREL ++G G K+D +++++ I
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFI 332
Query: 63 NG 64
+G
Sbjct: 333 HG 334
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI+RG+ PD ++DG+C ++R D A L M K D +++I
Sbjct: 516 LDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTI 575
Query: 61 LING 64
L N
Sbjct: 576 LFNA 579
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + M + G+ PD TC L+DG C + R D+A L + G D +S++ILI+G
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L M + + P T + L+DG C + R A LL M KG D ++SI
Sbjct: 446 MGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505
Query: 61 LING 64
L++
Sbjct: 506 LLDA 509
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A+ + E M+ +GV PD T + L+D FC A R D A ELL M S+GC + + +
Sbjct: 411 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 470
Query: 61 LING 64
+I+G
Sbjct: 471 IIDG 474
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A+ + E M+ +GV PD T + L+D FC A D A ELL M S+GC + + +
Sbjct: 905 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964
Query: 61 LING 64
+I+G
Sbjct: 965 IIDG 968
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + MI G P+ T NAL++G C AD+ +RA ++ SM KG D ++S+
Sbjct: 376 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 435
Query: 61 LING 64
L++
Sbjct: 436 LVDA 439
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E +++RG +PD T N L+D C A + AR L M S+ C + ++S+LING
Sbjct: 238 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLING 295
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + MI G P+ T N LM+G C D+ +RA ++ SM KG D ++S+L
Sbjct: 871 DEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVL 930
Query: 62 ING 64
++
Sbjct: 931 VDA 933
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++A+ L E M+ + + PD T AL+DG C A + + AR++L MG+ G + +++
Sbjct: 583 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 642
Query: 61 LING--GSARIRK 71
L++G S RI +
Sbjct: 643 LVHGLCKSGRIEE 655
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRAREL---LVSMGSKGCKQDAFSH 58
++A + E M+ +G +PD T N L+D C A + AR L + S S+ C + ++
Sbjct: 724 EQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTY 783
Query: 59 SILING 64
S+LING
Sbjct: 784 SVLING 789
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + +LM GV P+ T NAL+ G C + R + A + L M S GC D+ ++
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 677
Query: 61 LI 62
L+
Sbjct: 678 LV 679
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA E M+ G PD+ T +L+ C A R D A +L+ + S G D +++I
Sbjct: 653 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI 712
Query: 61 LING 64
L++G
Sbjct: 713 LVDG 716
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHS 59
+DEA L M RG P+ T N+++DG C +DR A ++ M K G D ++
Sbjct: 446 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYC 505
Query: 60 ILING 64
LI+G
Sbjct: 506 TLIDG 510
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHS 59
+DEA L M RG P+ T N+++DG C +D+ A ++ M K G D ++
Sbjct: 940 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYC 999
Query: 60 ILING 64
LI+G
Sbjct: 1000 TLIDG 1004
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M R P+ T + L++G C R D AREL+ M K C D + I
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC--DVLPNII 324
Query: 61 LIN 63
N
Sbjct: 325 TYN 327
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 5 NGLAEL---------MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDA 55
NGL++L M++ + PD T N L+ G C A F++A L M +K + D
Sbjct: 1034 NGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 1093
Query: 56 FSHSILING 64
+ LI+G
Sbjct: 1094 MTFGALIDG 1102
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ + PD T N L+ G C A F++A L M +K + D + LI+G
Sbjct: 558 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 611
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++R ++P T ++L++GFC+ DR D A+++ M SK C D S+S LI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLI 403
Query: 63 NG 64
G
Sbjct: 404 KG 405
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+ + PD + + L+ GFC A R D EL M +G + +++
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 61 LING 64
LI G
Sbjct: 437 LIQG 440
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M G P+T T N L+ G L ++ A L+ M +KGC+ D ++ +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGV 226
Query: 61 LING 64
++NG
Sbjct: 227 VVNG 230
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M +G+ P+ T ++L+ C R+ A LL M + D F+ S
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 61 LING 64
LI+
Sbjct: 332 LIDA 335
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ + M + GV P+ T ++LM+G+ L AR+L M +KGCK D FS++ILI
Sbjct: 133 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILI 192
Query: 63 NG 64
NG
Sbjct: 193 NG 194
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L ++MI +G PD + N L++G+C A R A++L M +G D S++ LI
Sbjct: 168 EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 227
Query: 63 NG 64
+G
Sbjct: 228 DG 229
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L MI +G+ PD + N L+DG C R A +L +M + G D ++SIL+
Sbjct: 203 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 262
Query: 63 NG 64
+G
Sbjct: 263 DG 264
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M+ RG PD T +++G C A L MG GC+ D ++S +I+
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIID 53
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL + M + G PD T + ++D C R + A ++ M +KG + F+++ LI
Sbjct: 29 AAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ 88
Query: 64 G 64
G
Sbjct: 89 G 89
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L + M+ G PD T + L+DGFC +A L +M S K + ++I
Sbjct: 236 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 295
Query: 61 LING 64
LI+
Sbjct: 296 LIDA 299
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M +G++P+ T N+L+ G C R+ A +L M S + + S+
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 61 LIN 63
LIN
Sbjct: 121 LIN 123
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M ++GV P+ ST NALMDG+CL + A+++ M +GC S++I
Sbjct: 314 VSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNI 373
Query: 61 LING 64
LING
Sbjct: 374 LING 377
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + E+MI++G P + N L++GFC + R D A+ LL M K D ++S
Sbjct: 349 MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408
Query: 61 LING 64
L+ G
Sbjct: 409 LMQG 412
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M + +NPDT T + LM G C R A + M S G + ++SI
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI 443
Query: 61 LING 64
L++G
Sbjct: 444 LLDG 447
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M G+ P+ T + L+DGFC D A +LL SM K + + H+ILI
Sbjct: 421 EALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILI 480
Query: 63 NG 64
G
Sbjct: 481 EG 482
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G++P ST NAL++G C + A EL M +G + + S++ +ING
Sbjct: 149 MFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIING 202
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ R V PDT T L+DG C AR + +M KG + + +++
Sbjct: 279 LNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNA 338
Query: 61 LING 64
L++G
Sbjct: 339 LMDG 342
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG+ P+ T N ++ GFC+ + + A L M + D + +IL++G
Sbjct: 254 MLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M++RG P+ + N +++G C A ++ M GCK D +++
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233
Query: 61 LIN 63
+I+
Sbjct: 234 IID 236
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q G PD T N ++D C + A E L M +G + F+++ +++G
Sbjct: 219 MEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHG 272
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + +++ LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 63 NG 64
NG
Sbjct: 408 NG 409
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T N L++GFC A R D EL M +G + +++
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 61 LING 64
LI+G
Sbjct: 441 LIHG 444
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T NAL+D F + A +L M + D F++S LI
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 63 NG 64
NG
Sbjct: 373 NG 374
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ + ++ +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 61 LINGGSAR 68
++NG R
Sbjct: 231 VVNGLCKR 238
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV+P+ T N L+DG C + ++A + + + ++++I+
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 62 ING 64
I G
Sbjct: 512 IEG 514
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + P T N +++G C A + + +L S+ KG K D ++
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 61 LING 64
+I+G
Sbjct: 546 MISG 549
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + ELM +G PD T N LM+G CL + + A +L S+ +G K + FS++ILI
Sbjct: 1208 EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267
Query: 63 NG 64
NG
Sbjct: 1268 NG 1269
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E LM+ RG +PD T L+DG C + A+++L M KG + D +++ L+
Sbjct: 1173 EVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLM 1232
Query: 63 NG 64
NG
Sbjct: 1233 NG 1234
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + MI G+ PD ++LMDG C R A E M +G D ++++ LI
Sbjct: 1103 EALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 1162
Query: 63 NGGS 66
+G S
Sbjct: 1163 HGLS 1166
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + + G+ PDT N L++G C A +LL M KGC D+ + ++
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440
Query: 61 LI 62
+I
Sbjct: 1441 II 1442
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E + RG+ + + N L++G+C + D A M KG K +++
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300
Query: 61 LING--GSARIR 70
LI S R+R
Sbjct: 1301 LIGALCQSGRVR 1312
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++RG PD T L+ G + + A +L M KG DA ++ ILING
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILING 1060
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E M +G+ P T T N L+ C + R A++L V M + G ++ +
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335
Query: 61 LING 64
L++G
Sbjct: 1336 LLDG 1339
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MI RGV P+ T NALMDG CL + D A ++ +M K C + S++ LI
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357
Query: 63 NG 64
NG
Sbjct: 358 NG 359
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + +PD ++DG C A + AR+L ++ SKG + + ++++I
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495
Query: 61 LING 64
+I+G
Sbjct: 496 MIHG 499
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E M++ ++PD T ++L++G CL DR D A ++ M SKGC D S++ LI
Sbjct: 278 EAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLI 337
Query: 63 NG 64
NG
Sbjct: 338 NG 339
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + +LM+ +G PD + N L++GFC A R + +L M +G + +++
Sbjct: 311 IDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNT 370
Query: 61 LING 64
LI G
Sbjct: 371 LIQG 374
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PD NA++D C R + A + +G KG + + +++
Sbjct: 171 VSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTA 230
Query: 61 LING 64
L+NG
Sbjct: 231 LVNG 234
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ +T T N L+ GF D+A+E M S G D ++++IL+ G
Sbjct: 356 MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L MI+R + P+ T +AL+D F + A+E+ M D ++S L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301
Query: 62 ING 64
ING
Sbjct: 302 ING 304
>gi|238478946|ref|NP_001154441.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|49660083|gb|AAT68332.1| hypothetical protein At1g63630 [Arabidopsis thaliana]
gi|50058961|gb|AAT69225.1| hypothetical protein At1g63630 [Arabidopsis thaliana]
gi|332196000|gb|AEE34121.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 152
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ + P T T N+++DGFC DR D A+ +L SM SKGC D + S LING
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLING 54
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M +G +PD T + L++G+C A R D E+ M +G + +++
Sbjct: 26 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 85
Query: 61 LING 64
LI+G
Sbjct: 86 LIHG 89
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + MI RGV PD T N ++DG C A D+A + M KG K D +++I
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370
Query: 61 LING 64
+I+G
Sbjct: 371 IIDG 374
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + M+ +GV P T N ++DG C A DRA + M +G K D +++
Sbjct: 276 VDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNT 335
Query: 61 LING 64
+I+G
Sbjct: 336 IIDG 339
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G+ + MI +GV PD T ++DG C A DRA + M KG K + +++
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405
Query: 61 LING 64
LI+G
Sbjct: 406 LIHG 409
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ G+ PD + N L+DG C A R D A +LL M S G K + S++ L+
Sbjct: 628 EARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLL 687
Query: 63 NG 64
+G
Sbjct: 688 HG 689
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L ++ GV+PD T N ++DG C A DRA ++ M KG K + +++ +I+G
Sbjct: 215 LFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDG 269
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M+++GV P+ T N ++DG C A D A + M KG K +++
Sbjct: 241 VDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNT 300
Query: 61 LING 64
+I+G
Sbjct: 301 IIDG 304
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L + M+ G+ P+ + N L+ G+C A R D A L M KG +++
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720
Query: 61 LING 64
++NG
Sbjct: 721 ILNG 724
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD-AFSHSILIN 63
MI GV P+ N+L+ G C D++++ EL + M ++G + D F +++L N
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M+++GV P T N +++G + RF AREL V+M ++SI
Sbjct: 696 IDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSI 755
Query: 61 LING 64
+++G
Sbjct: 756 ILDG 759
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MI RGV P+ T NALMDG CL + D A ++ +M K C + S++ LI
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357
Query: 63 NG 64
NG
Sbjct: 358 NG 359
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + +PD ++DG C A + AR+L ++ SKG + + ++++I
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495
Query: 61 LING 64
+I+G
Sbjct: 496 MIHG 499
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + MI +G PD T +A++DGFC D+AR+++ M GCK + +H+
Sbjct: 355 MSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTA 414
Query: 61 LING 64
L+NG
Sbjct: 415 LLNG 418
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A AE M + GV+PD T N L+ G C A R A E++ SM GC D S+
Sbjct: 214 VDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFT 273
Query: 61 LIN 63
+++
Sbjct: 274 VMS 276
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+A++ FCL R A+E++ M SKGC+ D ++S +++G
Sbjct: 343 SAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDG 383
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M + G P+T T AL++G C + A ELL + ++S+
Sbjct: 390 LDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSV 449
Query: 61 LING 64
+++G
Sbjct: 450 IMHG 453
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D + L + M+ GV+P+T T N L+ G C + RF+ ARE+ MG KGC+ + FS I
Sbjct: 132 VDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGI 191
Query: 61 LING 64
L+ G
Sbjct: 192 LVRG 195
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + LMI G+ PDT T + L+ G C + +A +L M +GC + ++ +I
Sbjct: 381 ISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNI 440
Query: 61 LIN 63
L++
Sbjct: 441 LLH 443
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+AN + M++RG +P+T TCN L+ R A +LL M + D + +I+I
Sbjct: 418 KANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVI 477
Query: 63 NG 64
+G
Sbjct: 478 DG 479
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 23/85 (27%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG------------ 50
EA L + M +R + D TCN ++DG C + + D A E++ M G
Sbjct: 453 EAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFI 512
Query: 51 -----------CKQDAFSHSILING 64
C D ++SI+ING
Sbjct: 513 GLVDSSSNGKKCLPDLITYSIIING 537
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M+ +G+ P+ + N +MDG C AR ++ M S G D ++S L+
Sbjct: 348 EAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLL 407
Query: 63 NG 64
+G
Sbjct: 408 HG 409
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + MI++GV P+ T N +MDG+CL + RAR + SM KG + D S++
Sbjct: 299 VEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTA 358
Query: 61 LING 64
LING
Sbjct: 359 LING 362
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ E + G++PD T A++ G+C D A+++L M GC D ++++
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNV 533
Query: 61 LING 64
++ G
Sbjct: 534 IVRG 537
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
MI + PD T N+++DG C + + A E++ M KG + + +++++++G R
Sbjct: 274 MIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLR 331
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + + MI +G+ PD + AL++G+ + D+A +L + G K + S+
Sbjct: 334 MGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSV 393
Query: 61 LING 64
L+ G
Sbjct: 394 LLRG 397
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L LM Q PDT N ++D FC D A LL M K D +++ LI
Sbjct: 196 KAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLI 255
Query: 63 NG 64
+G
Sbjct: 256 DG 257
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + ++M+++G+ P+ T N+LMDG+CL ++A+ + +M G D S+SI
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 61 LING 64
+ING
Sbjct: 371 MING 374
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M Q GVNPD + + +++GFC +FD A L M K D ++S
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 61 LINGGSARIR 70
LI+G S R
Sbjct: 406 LIDGLSKSGR 415
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M+ +G++PD T +AL+ GFC+ + A +L M + K D ++ +I
Sbjct: 241 VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300
Query: 61 LING 64
L+N
Sbjct: 301 LVNA 304
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RGV P+ T N+++D C + D+A LL KG + D ++SILI G
Sbjct: 422 LVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L +G PD ST + L+ G C + + + AR++ + KG D ++++I
Sbjct: 451 VDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTI 510
Query: 61 LING 64
+I G
Sbjct: 511 MIQG 514
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G N D ++ GFC+ F+ A LL M GC DA ++ I
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 61 LI 62
+I
Sbjct: 546 II 547
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + ++M+++G+ P+ T N+LMDG+CL ++A+ + +M G D S+SI
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 61 LING 64
+ING
Sbjct: 371 MING 374
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M Q GVNPD + + +++GFC +FD A L M K D ++S
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 61 LINGGSARIR 70
LI+G S R
Sbjct: 406 LIDGLSKSGR 415
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L MI +G++PD T +AL+ GFC+ + + A +L M + K D ++ +I
Sbjct: 241 VNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNI 300
Query: 61 LING 64
L+N
Sbjct: 301 LVNA 304
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RGV P T N+++D C + D+A LL + KG + + +++SILI G
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G N + T ++ GFC+ F+ A LL M GC DA ++ I
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 61 LI 62
+I
Sbjct: 546 II 547
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + MI +GV PD T N ++DG C A DRA +L M KG K D +++
Sbjct: 250 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 309
Query: 61 LING 64
+I+G
Sbjct: 310 IIDG 313
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + MI +GV PD T N ++DG C A DRA +L M K K D +++
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344
Query: 61 LING 64
LI+G
Sbjct: 345 LIHG 348
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + MI +GV D T + ++DG C A DRA +L M KG K D +++
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274
Query: 61 LING 64
+I+G
Sbjct: 275 IIDG 278
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M+++GV P T + ++ G RF A+EL ++M G + D ++++I
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694
Query: 61 LING 64
++NG
Sbjct: 695 ILNG 698
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + M + GV P+ + N L+ G CLA R D A +LL M S G K D S+ L+
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLR 627
Query: 64 G 64
G
Sbjct: 628 G 628
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L ++M+ G+ PD + + L+ G+C R D A L M KG A ++S +
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660
Query: 62 ING 64
+ G
Sbjct: 661 LQG 663
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD-AFSHSILIN 63
MI GV P++ N+L+ G C DR+++A EL M +G + + F ++I+ N
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MDEANGLAELMIQRG---VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++EA L M + G P+ T N ++DG C A DRA +L M KG K D +
Sbjct: 177 VEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVT 236
Query: 58 HSILING 64
+S +I+G
Sbjct: 237 YSTIIDG 243
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
E M RG++PD T + L+D C + AR++ M KG K + + IL++G +AR
Sbjct: 363 EEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAAR 422
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+G+ + MI + V PD T N L+ G+ + L M ++G D ++S+
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSL 379
Query: 61 LI-----NGGSARIRK 71
L+ NG RK
Sbjct: 380 LLDYLCKNGKCTEARK 395
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MDEA-NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG---CKQDAF 56
+DEA + L M + G P+ +CN L+ G C R + A ELL +M G C +
Sbjct: 141 VDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVV 200
Query: 57 SHSILING 64
+++ +I+G
Sbjct: 201 TYNTIIDG 208
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL + M G PD TCN+LM G+C + D+ R++ M SKG K D +S+SI IN
Sbjct: 129 AAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFIN 188
Query: 64 G 64
G
Sbjct: 189 G 189
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ + LM+ +G+ PD + + ++G+C ++ D A EL M +G +A +++
Sbjct: 161 IDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNT 220
Query: 61 LINGGSARIR 70
LI +R
Sbjct: 221 LIKALCQALR 230
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M RGV P+ T N L+ C A R A+ L M + G D ++S
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYST 255
Query: 61 LING 64
L++G
Sbjct: 256 LLDG 259
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + +I G+ PD T AL+DG C A L M GC + S+++L+
Sbjct: 303 DAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLL 362
Query: 63 NG 64
G
Sbjct: 363 QG 364
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M G++PD + L+DGFC D L M + K D ++I+I
Sbjct: 233 DAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIII 292
Query: 63 NG 64
NG
Sbjct: 293 NG 294
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + M +R V PD +++G C + + A+E+L + +G K D +++
Sbjct: 266 LDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTA 325
Query: 61 LING 64
L++G
Sbjct: 326 LVDG 329
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++RG PD L+DG C + + A LL MG GC D + + L+ G
Sbjct: 102 LKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRG 154
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +LM++ GV PD T + L+DG+CLA + D A +LL M S G K + ++ LI
Sbjct: 464 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLI 523
Query: 63 NG 64
NG
Sbjct: 524 NG 525
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ P+T T L++G+C R A L M S G D +++I
Sbjct: 497 MDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNI 556
Query: 61 LING 64
++ G
Sbjct: 557 ILQG 560
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSIL 61
E MI G++P N+L+ G C ++++RA EL++ M +G C F +SI+
Sbjct: 400 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 453
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + ++S LI
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 63 NG 64
G
Sbjct: 406 KG 407
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T + L+ GFC A R + EL M +G + +++
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 61 LING 64
LI+G
Sbjct: 439 LIHG 442
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ D ++
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 61 LINGGSAR 68
++NG R
Sbjct: 229 VVNGLCKR 236
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + A +L M + D F++S LI
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 63 NG 64
NG
Sbjct: 371 NG 372
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++G+C + R A L+ M G K D F+ + LI+G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M + + D N ++DG C D A L M +KG + D F++S
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 61 LIN 63
LI+
Sbjct: 299 LIS 301
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG PD T +++G C D A LL M + D ++ +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 63 NG 64
+G
Sbjct: 266 DG 267
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV+P+ T N L+DG C + +A + + + D ++++I+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 62 ING 64
I G
Sbjct: 510 IEG 512
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L +M+ +G+ P+ T +AL+DG C + +F A+E+L M + G DAF++S
Sbjct: 143 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSA 202
Query: 61 LING 64
LI+G
Sbjct: 203 LIHG 206
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E M GV PD T +AL+ G C AD+ + A ++L M GC D +S +I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
Query: 63 NG 64
+
Sbjct: 240 HA 241
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M + G NPD T ++DG C R + A LL M GC + +++ LI
Sbjct: 321 EAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLI 380
Query: 63 NG 64
+G
Sbjct: 381 SG 382
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + MI+ G P+ T N+L+DGFC D AR+LL M +KG + + ++S LI+
Sbjct: 111 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 170
Query: 64 G 64
G
Sbjct: 171 G 171
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M + G P+ T L+ G C A + D A ++ M + GC + +++
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413
Query: 61 LING--GSARIRK 71
++NG S RI++
Sbjct: 414 MVNGLCVSGRIKE 426
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM--GSKGCKQDAFSH 58
+DEA + E M G P+ T N +++G C++ R A++L+ M G C DA ++
Sbjct: 389 VDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 448
Query: 59 SILING 64
++N
Sbjct: 449 RTIVNA 454
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
EA + + M + G V PD T + +++G C +D A++LL M GC D +++ +
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344
Query: 62 ING 64
I+G
Sbjct: 345 IDG 347
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + ELM +G PD T N LM+G CL + + A +L S+ +G K + FS++ILI
Sbjct: 269 EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 328
Query: 63 NG 64
NG
Sbjct: 329 NG 330
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E LM+ RG +PD T L+DG C + A+++L M KG + D +++ L+
Sbjct: 234 EVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLM 293
Query: 63 NG 64
NG
Sbjct: 294 NG 295
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + MI G+ PD ++LMDG C R A E M +G D ++++ LI
Sbjct: 164 EALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 223
Query: 63 NGGS 66
+G S
Sbjct: 224 HGLS 227
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E + RG+ + + N L++G+C + D A L M KG K +++
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 61 LING--GSARIR 70
LI S R+R
Sbjct: 362 LIGALCQSGRVR 373
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M +G+ P T T N L+ C + R A++L V M + G ++ +
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396
Query: 61 LING 64
L++G
Sbjct: 397 LLDG 400
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + + G+ PDT N L++G C A +LL M KGC D+ + ++
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501
Query: 61 LI 62
+I
Sbjct: 502 II 503
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++RG PD T L+ G + + A +L M KG DA ++ ILING
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILING 121
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + MI++GV+PD T N ++DG+ L + DRARE+ SM +K + + S++I
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNI 358
Query: 61 LINGGSARIRK 71
LIN G AR +K
Sbjct: 359 LIN-GYARQKK 368
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ E + G++PD T A++ G+C D A+++L M GC D ++++
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533
Query: 61 LING 64
++ G
Sbjct: 534 IVRG 537
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
MI + P+ T N+++DG C + + A E++ M KG D +++++I+G R
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + Q+G+ P TCN L+ G R A+ M S G D ++H
Sbjct: 369 IDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCT 428
Query: 61 LING 64
L+ G
Sbjct: 429 LLGG 432
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L LM Q P+T + ++D FC D A LL M K D F++S LI
Sbjct: 196 KAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255
Query: 63 NG 64
+
Sbjct: 256 DA 257
>gi|242069949|ref|XP_002450251.1| hypothetical protein SORBIDRAFT_05g002603 [Sorghum bicolor]
gi|241936094|gb|EES09239.1| hypothetical protein SORBIDRAFT_05g002603 [Sorghum bicolor]
Length = 82
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ GV PD + N L+DG CL +R D A +LL +M S G + D+FS+ L+
Sbjct: 3 EARRLTDSVVCMGVKPDVISYNTLIDGHCLTNRIDEASQLLDTMVSVGLRPDSFSYDTLL 62
Query: 63 NG 64
NG
Sbjct: 63 NG 64
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRA----RELL 43
+DEA+ L + M+ G+ PD+ + + L++G+C A R D A RE+L
Sbjct: 36 IDEASQLLDTMVSVGLRPDSFSYDTLLNGYCKAGRIDNACCLFREML 82
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA ++ +G+ PD T N+L+ G CL + A EL M +KGC D F++++
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461
Query: 61 LINGGSARIR 70
LI+ +R R
Sbjct: 462 LIDSLCSRGR 471
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ G+ PD T N+L+ FC A +A +++ +M S GC+ D+ ++
Sbjct: 542 VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGT 601
Query: 61 LINGGS 66
LI G S
Sbjct: 602 LILGLS 607
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M +G +PD T N L+D C R + A LL M S GC ++ +++ LI+G
Sbjct: 443 LFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDG 500
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G + + T N L+DGFC R + A E+ M +G ++ +++
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531
Query: 61 LING 64
LI+G
Sbjct: 532 LIDG 535
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING------ 64
M+ RG+ PD +T N L+ C A + A ++ MGS G D + + L+ G
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261
Query: 65 --GSARIRK 71
G+ RIR+
Sbjct: 262 MNGALRIRE 270
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M +G++ + T N L+DG C R + A +L+ M +G K D F+++
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566
Query: 61 LI 62
L+
Sbjct: 567 LL 568
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A + E M+ G T N L+ G+C R + + M ++G + D F+ +
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321
Query: 61 LING 64
L+NG
Sbjct: 322 LVNG 325
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + MI R +P+T T N L+ C ++ + A EL + SKG D + +
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426
Query: 61 LING 64
LI G
Sbjct: 427 LIQG 430
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + M G PD T N+L++G C A E+L M +G D F+++
Sbjct: 297 IEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNS 356
Query: 61 LING 64
LI G
Sbjct: 357 LIFG 360
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M +R V+PD T N+L++G C+ R D A+++L M +KGC D +++ LI
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 63 NG 64
NG
Sbjct: 322 NG 323
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LM+ +G PD T N L++GFC + R D +L M +G D +++
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 61 LING 64
+I G
Sbjct: 355 IIQG 358
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++GFC +R A +L+ M G + D ++ +I+G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M QRG+ DT T N ++ G+ A R D A+E+ M S + + ++SI
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 386
Query: 61 LING 64
L+ G
Sbjct: 387 LLYG 390
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+ R + P+ T A++D F +F A +L M + D F+++ LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 63 NG 64
NG
Sbjct: 287 NG 288
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + MI +G PD T +A++DGFC D+AR+++ M GCK + +H+
Sbjct: 352 MAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTA 411
Query: 61 LING 64
L+NG
Sbjct: 412 LLNG 415
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+D+A AE M + GV+PD T N L+ G C A R A E++ SM GC D S+
Sbjct: 212 IDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISY 269
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M + G P+T T AL++G C + A ELL + A ++S+
Sbjct: 387 LDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSV 446
Query: 61 LING 64
+++G
Sbjct: 447 VMHG 450
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+A + FCL R A+E++ M SKGC+ D ++S +++G
Sbjct: 340 SATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDG 380
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--GS 66
+LM + G PD CN ++ +A R D+A E M G D +++ LI G G+
Sbjct: 185 QLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGA 244
Query: 67 ARI 69
RI
Sbjct: 245 RRI 247
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA +A L+ +G+ PD T N+L+ G CL+ A +L M KGC+ D F++++
Sbjct: 394 VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNM 453
Query: 61 LING 64
LI+
Sbjct: 454 LIDS 457
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + MI G+ PD T N+L+ FC +A +++ +M S GC D +++
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 61 LING 64
LI+G
Sbjct: 594 LISG 597
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M++ G T N L++GFC R D+A + S+G + D F+++
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313
Query: 61 LING 64
L+NG
Sbjct: 314 LVNG 317
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M +GV+ D+ T N L+DG C + R + A +L+ M +G + D F+++
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558
Query: 61 LIN 63
L+
Sbjct: 559 LLT 561
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M+ R +P+ T NA++ C +R D A E+ + SKG D + +
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 418
Query: 61 LING 64
LI G
Sbjct: 419 LIQG 422
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G + N L+DGFC R + A E+ M +G +D+ +++
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523
Query: 61 LING 64
LI+G
Sbjct: 524 LIDG 527
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L E M +G PD T N L+D C + + + A LL M GC ++ ++ LI+
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID 491
Query: 64 G 64
G
Sbjct: 492 G 492
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + M+ G++PD T N+L+ G C + A ++L M S+ C +A +++ +I+
Sbjct: 327 AMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIIS 386
Query: 64 G 64
Sbjct: 387 S 387
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + G PD T N L++G C A E++ +M G D ++++
Sbjct: 289 IDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNS 348
Query: 61 LING 64
LI+G
Sbjct: 349 LISG 352
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M +R V+PD T N+L++G C+ R D A+++L M +KGC D +++ LI
Sbjct: 203 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 262
Query: 63 NG 64
NG
Sbjct: 263 NG 264
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LM+ +G PD T N L++GFC + R D +L M +G D +++
Sbjct: 236 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 295
Query: 61 LING 64
+I G
Sbjct: 296 IIQG 299
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++GFC +R A +L+ M G + D ++ +I+G
Sbjct: 71 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 124
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M QRG+ DT T N ++ G+ A R D A+E+ M S + + ++SI
Sbjct: 271 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 327
Query: 61 LING 64
L+ G
Sbjct: 328 LLYG 331
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+ R + P+ T A++D F +F A +L M + D F+++ LI
Sbjct: 168 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 227
Query: 63 NG 64
NG
Sbjct: 228 NG 229
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
NGLA +M+++G+ PD T N+LMDG+CL + + A+ +L +M +G S++I+ING
Sbjct: 301 NGLA-MMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVING 359
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A GL M +NPD T N L+D FC R A+ L M +G K D +++
Sbjct: 261 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNS 320
Query: 61 LING 64
L++G
Sbjct: 321 LMDG 324
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L +LM RG PD T ++++D C D+A LL+ + +G + + ++++ILI+G
Sbjct: 407 LIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G N +T ++ GFC FD A LL M C DA ++ I
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530
Query: 61 LI 62
+I
Sbjct: 531 II 532
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M + + P+ T N+L+DG C + R A EL+ M +G + D ++S
Sbjct: 366 VDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSS 425
Query: 61 LING 64
+++
Sbjct: 426 ILDA 429
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT T N + GFCL + +A + + G D S+ LING
Sbjct: 131 ILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLING 184
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ R ++ + T +AL+ GFC+ + A L M S+ D ++ +I
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285
Query: 61 LING 64
L++
Sbjct: 286 LVDA 289
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +G+ P+ T L+DG C R + AR + + KG ++++
Sbjct: 436 VDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495
Query: 61 LING 64
+I G
Sbjct: 496 MIQG 499
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ + ++M Q GV PD T AL+DG CL D A ++ M KGC + FS++ LI
Sbjct: 302 QAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLI 361
Query: 63 NG 64
NG
Sbjct: 362 NG 363
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + ++M+ +G P+ + N L++G+C +R D+A L M + + +++
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394
Query: 61 LING 64
LI+G
Sbjct: 395 LIHG 398
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + ++PD ++DG C A + AR+L ++ SKG K + ++++I
Sbjct: 440 LDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNI 499
Query: 61 LINGGSAR 68
+ +G R
Sbjct: 500 MTHGLCKR 507
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT++ L+ G CL + A L M +G + D ++ LING
Sbjct: 135 ILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLING 188
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + +M+++ V D T N+LMDG+CL + ++A+ L M +G D +S+SI+I
Sbjct: 286 EAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMI 345
Query: 63 NG 64
NG
Sbjct: 346 NG 347
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E ++ +G +P+ T +L++GFC FD +L M GC +A ++ I
Sbjct: 459 LDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEI 518
Query: 61 LIN 63
LI+
Sbjct: 519 LIH 521
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG + T N+++D C + D+A LL + KG + D F++++LING
Sbjct: 395 LVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLING 452
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + ++G+ PD T L++G C R D A+++ + KG + ++++
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483
Query: 61 LING 64
LING
Sbjct: 484 LING 487
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI +NP+ T + L+DGFC + A+ +L M K K D +++ L++G
Sbjct: 259 MISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDG 312
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L +M QRGV PD + + +++GFC D A +L M K + +++
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378
Query: 61 LING 64
L++G
Sbjct: 379 LVDG 382
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ + ++PD T ++L+ GFC+ + A +L M S + ++ SILI+G
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L++ M G+ PD TCN LM+ F + + + KG DA + +ILI
Sbjct: 77 ALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIK 136
Query: 64 G 64
G
Sbjct: 137 G 137
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M+ RG+ PD T NA++ G C +RA EL+ S+ SKGC+ D S++I
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292
Query: 61 LI 62
L+
Sbjct: 293 LL 294
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA GL + M Q G P + N ++ G C R D A + M KGC+ + ++ +
Sbjct: 478 VEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYIL 537
Query: 61 LING 64
LI G
Sbjct: 538 LIEG 541
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + +G PD + N L+ F ++D +L+ M S+GC+ + ++SI
Sbjct: 268 VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 327
Query: 61 LIN 63
LI+
Sbjct: 328 LIS 330
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ++MI++ + PDT + + L+ C R D A ++ M S GC D +++
Sbjct: 338 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 397
Query: 61 LI 62
++
Sbjct: 398 IL 399
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ MI +G++PD T N+L+ C + A LL M G + S++I++
Sbjct: 446 ALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLL 505
Query: 64 G 64
G
Sbjct: 506 G 506
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEAN + ELM++ G +P T L+DGFC D+A E+L + SKG D + SI
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339
Query: 61 LINGGSARIR 70
I+ S R R
Sbjct: 1340 FIDWLSKRGR 1349
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A GL E+M+++G P+ T N+L+D FC D +RA +LL SM KGC + S++ +
Sbjct: 1070 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 1129
Query: 62 ING 64
I G
Sbjct: 1130 IAG 1132
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ G P+ + N ++ GFC A+R + A LL M ++GC D S++
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305
Query: 61 LING 64
+ING
Sbjct: 306 VING 309
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + G +P+ T N ++DG C R D A LL M GC+ + ++++
Sbjct: 999 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058
Query: 61 LING 64
L++
Sbjct: 1059 LLDA 1062
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L E MI+RG PD + + L+D C A D A+ELL C D ++SI
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480
Query: 61 LING 64
LI+
Sbjct: 481 LIHA 484
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ +G +P+ T ++L+ G C A + D A LL M GC + +++
Sbjct: 964 VDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 1023
Query: 61 LING 64
+I+G
Sbjct: 1024 IIDG 1027
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
L E+ ++G +PD T N ++DG C + R DRA +L + M S G D ++SI+I+
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 1272
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A+ + ++MIQ G PD + ++ GFC A + A +LL M +GC+ D S
Sbjct: 386 MERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLST 445
Query: 61 LING 64
LI+
Sbjct: 446 LIDA 449
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M +RG P+ T N +M FC + +RA ++L M GC DA ++S
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410
Query: 61 LING 64
+I+G
Sbjct: 411 IISG 414
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + MIQRG P+ T L+DGFC D A EL+ M +G + +A +++
Sbjct: 316 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 375
Query: 61 LIN 63
+++
Sbjct: 376 IMH 378
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M+ G P+ T N L+DG C ++ ++A E+L M + C D+ +++
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655
Query: 61 LING 64
LING
Sbjct: 656 LING 659
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHS 59
+D A L L+ + G P+ T N+L+ G C + RFD+A LL M K GC D +++
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233
Query: 60 ILING 64
+I+G
Sbjct: 1234 TVIDG 1238
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L E M++ G+ PDT T N L+ GFC A + A +L M GC+ D +++
Sbjct: 1350 LRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTT 1409
Query: 61 LI 62
L+
Sbjct: 1410 LV 1411
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E+M ++ PD+ T L++G C A R + A +L M KGC D ++
Sbjct: 631 VEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGT 690
Query: 61 LI 62
L+
Sbjct: 691 LL 692
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+ RG PD + +++G C D+ D A ++ M +GC+ + ++ L++G
Sbjct: 287 LLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M + PD T +AL++G C A D+A ++ M GC + +++
Sbjct: 561 LDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNT 620
Query: 61 LING 64
LI+G
Sbjct: 621 LIDG 624
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA ++M++ PD T N+++DG C + R + A L M + G D ++SI
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550
Query: 61 LIN 63
+I+
Sbjct: 551 VIH 553
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M GV PD T + ++ FC + D A ++L M C D ++S
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585
Query: 61 LING 64
LING
Sbjct: 586 LING 589
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+ G P+ T L+D FC + + A L+ M KG + F+++
Sbjct: 1034 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093
Query: 61 LIN 63
L++
Sbjct: 1094 LLD 1096
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+ PD T N ++D C R D A EL + GC + +++ L++G
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 1202
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD+ T N +++G +DR D A LL M G + FS++ +++G
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHG 274
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + LMI+RG+ PD +CNALM+G+CL A+E+ M +G + S+S LI
Sbjct: 285 EARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLI 344
Query: 63 NG 64
NG
Sbjct: 345 NG 346
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + ++ G++P+ T N L+DG C R A+E+ + KGC+ + +++I
Sbjct: 423 LDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNI 482
Query: 61 LING 64
+ING
Sbjct: 483 MING 486
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M++RG P+ + + L++G+C D A LL M + D +++
Sbjct: 318 MSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNC 377
Query: 61 LINGGSARIR 70
L++G S R
Sbjct: 378 LLDGLSKSGR 387
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHSIL 61
EA GL M+ +G+ D T N+L+ GFC A +F A LL M K + D ++ +IL
Sbjct: 214 EACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNIL 273
Query: 62 ING 64
++
Sbjct: 274 VDA 276
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M QR + PDT T N L+DG + R +L+ +M + G D ++++
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412
Query: 61 LIN 63
L++
Sbjct: 413 LLD 415
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E++++ V PD T N L+D C AR + M +G + D S + L+NG
Sbjct: 254 LNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWC 313
Query: 67 AR 68
R
Sbjct: 314 LR 315
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK-----QDA 55
M+ A+ + E M+ +GV PD T + L+D FC A R D A ELL M S+GC D
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291
Query: 56 FSHSILINGG 65
+ +ILI G
Sbjct: 292 VTFNILIAGA 301
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E +++RG +PD T N L+D C A + AR L M S+GC + ++S+LING
Sbjct: 59 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLING 116
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + MI G P+ T NAL++G C AD+ +RA ++ SM KG D ++S+
Sbjct: 197 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 256
Query: 61 LING 64
L++
Sbjct: 257 LVDA 260
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++A+ L E M+ + + PD T AL+DG C A + + AR++L MG+ G + +++
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 61 LING--GSARIRK 71
L++G S RI +
Sbjct: 367 LVHGLCKSGRIEE 379
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + +LM GV P+ T NAL+ G C + R + A + L M S GC D+ ++
Sbjct: 342 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 401
Query: 61 LI 62
L+
Sbjct: 402 LV 403
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA E M+ G PD+ T +L+ C A R D A +L+ + S G D +++I
Sbjct: 377 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI 436
Query: 61 LING 64
L++G
Sbjct: 437 LVDG 440
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M RG P+ T + L++G C R D AREL+ M K C D + I
Sbjct: 88 LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC--DVLPNII 145
Query: 61 LIN 63
N
Sbjct: 146 TYN 148
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L + G +PDT T N L+DG + + ++A +L M KG + D+F+ +
Sbjct: 413 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 472
Query: 62 ING 64
+G
Sbjct: 473 FSG 475
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 1 MDEANGLAELMIQRGVNP-----DTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDA 55
+DEA L M RG P D T N L+ G C A F++A L M +K + D
Sbjct: 267 VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 326
Query: 56 FSHSILING 64
+ LI+G
Sbjct: 327 MTFGALIDG 335
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M ++G+ PD T NAL+DG+C + D A++L M KGC + S++I
Sbjct: 166 ISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNI 225
Query: 61 LING 64
LING
Sbjct: 226 LING 229
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L +M ++G P+ + N L++G C + R D A+ LL M K D F++S
Sbjct: 201 MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYST 260
Query: 61 LING 64
L+ G
Sbjct: 261 LMRG 264
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL M + + PD T + LM GFC R A+ELL M S G + ++SI
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 61 LING 64
+++G
Sbjct: 296 VLDG 299
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M++R V P+ T L+DG C A + +M KG + D ++++
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 61 LINGGSAR 68
L++G +R
Sbjct: 191 LVDGYCSR 198
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M G+ P+ T + ++DG C D A ELL +M + + F ++ILI
Sbjct: 273 EAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILI 332
Query: 63 NG 64
G
Sbjct: 333 EG 334
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + P+ L++G C + + AREL ++ KG + ++++
Sbjct: 306 LDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTV 365
Query: 61 LING 64
+I+G
Sbjct: 366 MISG 369
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++ G PD T + +++G C A +LL M KGCK + +++ +I
Sbjct: 28 DAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTII 87
Query: 63 N 63
+
Sbjct: 88 D 88
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M++ G+ PD T ++++ GFC R + A L M + + + +ILI
Sbjct: 98 EAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILI 157
Query: 63 NG 64
+G
Sbjct: 158 DG 159
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M + G++PD T N L+DG C A + + A ELL M K C D ++SIL+
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379
Query: 63 NG 64
NG
Sbjct: 380 NG 381
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E+M++RG P+ T N ++DGFC A + D ++L M C D ++S
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 61 LING 64
LI+G
Sbjct: 448 LIDG 451
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + ++M+++G PD +T +L+DGFC ++ D A + +M GC+ D +++I
Sbjct: 557 VEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNI 616
Query: 61 LING 64
LI+G
Sbjct: 617 LISG 620
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + E MI++ PD T N+LMDGFC + D A LL M + C +++ L
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308
Query: 62 INGGS 66
I G S
Sbjct: 309 IGGFS 313
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + +LM ++G P +S ++ G C +R D A ++L M +GC+ + +++SI
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546
Query: 61 LING 64
LING
Sbjct: 547 LING 550
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + G+ PDT NAL++G C ++ + +LL M G + D FS++
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237
Query: 61 LI 62
++
Sbjct: 238 VV 239
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + MIQ+ +PD + N L+ G C + D AR +L M + C D +++
Sbjct: 108 IDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTS 167
Query: 61 LING 64
LI G
Sbjct: 168 LIVG 171
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L E+M+++ PD T + L++G C + D AR LL M +GC+ + + +
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412
Query: 61 LING 64
+I+G
Sbjct: 413 MIDG 416
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + ++M +RG P+ T + L++G C R + A +L M KGC D +++ L
Sbjct: 523 DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSL 582
Query: 62 ING 64
I+G
Sbjct: 583 IDG 585
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + ++M++R PD T +L+ G C + D AR+L+ M G D +++
Sbjct: 143 IDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNA 202
Query: 61 LING 64
L+NG
Sbjct: 203 LLNG 206
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + L E M++ G PDT + N ++ C + +++ A ++L M K C D +++
Sbjct: 213 LEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNS 272
Query: 61 LING 64
L++G
Sbjct: 273 LMDG 276
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+AN + + G++PD ++ +++++G C + + A+E++ M +GC + SH LI
Sbjct: 454 KANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTS-SHYALI 512
Query: 63 NGGSARIRK 71
GG + +
Sbjct: 513 IGGLCDVER 521
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + M G PD N L+ GFC + ++A E++ M KGC DA ++
Sbjct: 592 MDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFS 651
Query: 61 LI 62
L+
Sbjct: 652 LM 653
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M+ R P T L+ GF ADR A ++ M G D +++
Sbjct: 283 MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNC 342
Query: 61 LING 64
L++G
Sbjct: 343 LLDG 346
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + + ELM + PD T + L+DG+C A+R A +L G D S+S
Sbjct: 423 VDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSS 476
Query: 61 LING 64
++ G
Sbjct: 477 MLEG 480
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+A M+ R +PD T N ++ +C DRA L G C AF++ ILI+G
Sbjct: 46 IANEMLARRFSPDVITHNTILKAYCQIGDLDRA--LSHFRGKMWCSPTAFTYCILIHG 101
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++R ++P T ++L++GFC+ DR D A+++ M SK C D +++ LI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 63 NG 64
G
Sbjct: 404 KG 405
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+ + PD T N L+ GFC R + E+ M +G + +++I
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 61 LING 64
LI G
Sbjct: 437 LIQG 440
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M G P+T T N L+ G L ++ A L+ M +KGC+ D ++ +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 61 LING 64
++NG
Sbjct: 227 VVNG 230
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M +G+ P+ T ++L+ C R+ A LL M + D F+ S
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 61 LING 64
LI+
Sbjct: 332 LIDA 335
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEAN + ELM++ G +P T L+DGFC D+A E+L + SKG D + SI
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611
Query: 61 LINGGSARIR 70
I+ S R R
Sbjct: 612 FIDWLSKRGR 621
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A GL E+M+++G P+ T N+L+D FC D +RA +LL SM KGC + S++ +
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401
Query: 62 ING 64
I G
Sbjct: 402 IAG 404
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ G P+ + N ++ GFC A+R + A LL M +GC D S++
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 61 LING 64
+ING
Sbjct: 120 VING 123
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + G +P+ T N ++DG C R D A LL M GC+ + ++++
Sbjct: 271 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330
Query: 61 LING 64
L++
Sbjct: 331 LLDA 334
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ +G +P+ T ++L+ G C A + D A LL M GC + +++
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295
Query: 61 LING 64
+I+G
Sbjct: 296 IIDG 299
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + MIQRG P+ T L+DGFC D A EL+ M +G + +A +++
Sbjct: 130 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 189
Query: 61 LING 64
+++G
Sbjct: 190 IMHG 193
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
L E+ ++G +PD T N ++DG C + R DRA +L + M S G D ++SI+I+
Sbjct: 488 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 544
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L E M++ G+ PDT T N L+ GFC A R + A +L M GC+ D +++
Sbjct: 622 LRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTT 681
Query: 61 LI 62
L+
Sbjct: 682 LV 683
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHS 59
+D A L L+ + G P+ T N+L+ G C + RFD+A LL M K GC D +++
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 505
Query: 60 ILING 64
+I+G
Sbjct: 506 TVIDG 510
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E M+ RG PD + +++G C D+ D A ++ M +GC+ + ++
Sbjct: 95 VENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGT 154
Query: 61 LING 64
L++G
Sbjct: 155 LVDG 158
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D A L M +RG P+ T N +M G C + D A +L M G C D F++S
Sbjct: 165 LDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224
Query: 60 ILIN 63
+++
Sbjct: 225 TIVD 228
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+ G P+ T L+D FC + + A L+ M KG + F+++
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365
Query: 61 LIN 63
L++
Sbjct: 366 LLD 368
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+ PD T N ++D C R D A EL + GC + +++ L++G
Sbjct: 417 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 474
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD+ T N +++G +DR D A LL M G + FS++ +++G
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHG 88
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L ELM++ GV PD + N L+DG CL R D A +LL M S G K + F+++ L+
Sbjct: 541 EAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLL 600
Query: 63 NG 64
+G
Sbjct: 601 HG 602
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L MI RG+ PD T N ++DG C A DRA+ + M KG K +++
Sbjct: 320 VDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNC 379
Query: 61 LING 64
LI+G
Sbjct: 380 LIHG 383
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L ++M+ G+ P+ T N L+ G+C A R D A LL M G D +++ +
Sbjct: 575 DEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTI 634
Query: 62 ING 64
++G
Sbjct: 635 LHG 637
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ G PD T N ++ G RF A+EL ++M + + D ++++I
Sbjct: 609 IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNI 668
Query: 61 LING 64
++NG
Sbjct: 669 ILNG 672
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MDEA-NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK---GCKQDAF 56
+DEA N L M + G P+ + N L+ GFC +R + A ELL M C D
Sbjct: 246 LDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVV 305
Query: 57 SHSILING 64
S++ +ING
Sbjct: 306 SYNTVING 313
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + +++ LI
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 386
Query: 63 NG 64
G
Sbjct: 387 KG 388
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T N L+ GFC A R + EL M +G + +++
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 419
Query: 61 LING 64
LI G
Sbjct: 420 LIQG 423
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + A +L M + D F++S LI
Sbjct: 292 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351
Query: 63 NG 64
NG
Sbjct: 352 NG 353
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M P+T T N L+ G L ++ A L+ M ++GC+ D F++
Sbjct: 150 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 209
Query: 61 LINGGSAR 68
++NG R
Sbjct: 210 VVNGLCKR 217
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A + + + D ++++I+
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490
Query: 62 ING 64
I G
Sbjct: 491 IEG 493
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + PD T N +++G C A + + +L S+ KG K + ++
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524
Query: 61 LING 64
+I+G
Sbjct: 525 MISG 528
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + +++ LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 63 NG 64
G
Sbjct: 403 KG 404
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T N L+ GFC A R + EL M +G + +++
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 61 LING 64
LI G
Sbjct: 436 LIQG 439
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + A +L M + D F++S LI
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 63 NG 64
NG
Sbjct: 368 NG 369
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M P+T T N L+ G L ++ A L+ M ++GC+ D F++
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 61 LINGGSAR 68
++NG R
Sbjct: 226 VVNGLCKR 233
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A + + + D ++++I+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 62 ING 64
I G
Sbjct: 507 IEG 509
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + PD T N +++G C A + + +L S+ KG K + ++
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 61 LING 64
+I+G
Sbjct: 541 MISG 544
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M ++GV P+ T NALM+G+CL + A ++ M KGC S+SI
Sbjct: 207 VSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSI 266
Query: 61 LING 64
LING
Sbjct: 267 LING 270
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M ++ + P+T T N LM G C A A+EL M S G + ++SI
Sbjct: 277 IDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSI 336
Query: 61 LING 64
L++G
Sbjct: 337 LLDG 340
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A+ + E+M+ +G P + + L++G+C + R D A+ LL M K + +++
Sbjct: 242 MNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301
Query: 61 LING 64
L+ G
Sbjct: 302 LMQG 305
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M G+ P+ T + L+DG C + A +LL SM + + D ++ILI
Sbjct: 314 EAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILI 373
Query: 63 NG 64
G
Sbjct: 374 QG 375
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M +R + PD N L+ G +A + + A+EL + + G + +++I
Sbjct: 347 LEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNI 406
Query: 61 LING 64
+I G
Sbjct: 407 MIKG 410
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + +++ LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 63 NG 64
G
Sbjct: 403 KG 404
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T N L+ GFC A R + EL M +G + +++
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 61 LING 64
LI G
Sbjct: 436 LIQG 439
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T N L+ G L ++ A L+ M +GC+ D ++
Sbjct: 166 ISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA 225
Query: 61 LINGGSAR 68
++NG R
Sbjct: 226 VVNGLCKR 233
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + A +L M + D F++S LI
Sbjct: 308 DASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 63 NG 64
NG
Sbjct: 368 NG 369
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG PD T A+++G C D A LL M + D ++ +I
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 262
Query: 63 NG 64
+G
Sbjct: 263 DG 264
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A + + + D ++++I+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 62 ING 64
I G
Sbjct: 507 IEG 509
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++G+C + R A L+ M G K D + + LI+G
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHG 194
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + PD T N +++G C A + + +L S+ KG K + ++
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 61 LING 64
+I+G
Sbjct: 541 MISG 544
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M + + D N ++DG C D A L M +KG + D F+++
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295
Query: 61 LIN 63
LI+
Sbjct: 296 LIS 298
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ RG+ PDT T N + G C + DRA E + ++ S+GCK D +++I
Sbjct: 131 IDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNI 190
Query: 61 LI 62
L+
Sbjct: 191 LL 192
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + ++ + G PD NA++ GFC A+R + A+ +L M KG D +H+I
Sbjct: 26 IDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNI 84
Query: 61 LI 62
+I
Sbjct: 85 MI 86
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL M+ P+ + ++ G C A R D A E+L +M GC+ + ++++
Sbjct: 376 VDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTL 435
Query: 61 LING 64
LI G
Sbjct: 436 LIEG 439
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + RG PD T N L+ ++D + + + S+GC+ + ++SI
Sbjct: 166 VDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225
Query: 61 LIN 63
LI+
Sbjct: 226 LIS 228
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + +M+++G+ PD T N+LMDG+CL + A+ + +M G D S++I
Sbjct: 281 MKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 340
Query: 61 LING 64
LING
Sbjct: 341 LING 344
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M Q GVNPD + N L++GFC + D+A L M K + +++
Sbjct: 316 VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNS 375
Query: 61 LINGGSARIR 70
LI+G S R
Sbjct: 376 LIDGLSKSGR 385
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RGV P+ T N+++D + D+A L+ +G + ++++ILI+G
Sbjct: 392 LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 449
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ +G++P+ T +AL+ GF + + A +L + + K D ++ +I
Sbjct: 211 VNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNI 270
Query: 61 LING 64
L++G
Sbjct: 271 LVDG 274
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L +I + PD T N L+DGFC + + + M +G D +++
Sbjct: 246 LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNS 305
Query: 61 LING 64
L++G
Sbjct: 306 LMDG 309
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ +M +RG PD T NALM+G+C + AREL M +G + D ++++LI
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 63 NG 64
+G
Sbjct: 343 DG 344
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ +M+++GV P+ T NA+MDG+CL + + A+++ M G + D ++++LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Query: 63 NG 64
NG
Sbjct: 483 NG 484
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + PD ++ N+L+DG C R +ELL M G D +++I
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Query: 61 LING 64
L++
Sbjct: 551 LLDA 554
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L M++ V+PD T N L+D C R A+ +L M +G K D +++ L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307
Query: 63 NGGSAR 68
G +R
Sbjct: 308 EGYCSR 313
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M++RG+ PD N L+DG+C D A L + +K S++ LI
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377
Query: 63 NG--GSARI 69
+G S RI
Sbjct: 378 DGLCNSGRI 386
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A GL + +RG+ D T N+L+DG C R+ +LL M + D ++ +I
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 61 LING 64
LI+
Sbjct: 271 LIDA 274
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + + + + P ++ N+L+DG C + R ++LL M D +++I
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
Query: 61 LING 64
LI+
Sbjct: 411 LIDA 414
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G+ PD N L++G+C + D A L M K D S++ LI+G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L +++ G P+ T N +++GFC+ +A + ++ ++G D F++ LIN
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168
Query: 64 GGS 66
G S
Sbjct: 169 GLS 171
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ +M +RG PD T NALM+G+C + AREL M +G + D ++++LI
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 63 NG 64
+G
Sbjct: 343 DG 344
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ +M+++GV P+ T NA+MDG+CL + + A+++ M G + D ++++LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Query: 63 NG 64
NG
Sbjct: 483 NG 484
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + PD ++ N+L+DG C R +ELL M G D +++I
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550
Query: 61 LING 64
L++
Sbjct: 551 LLDA 554
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L M++ V+PD T N L+D C R A+ +L M +G K D +++ L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307
Query: 63 NGGSAR 68
G +R
Sbjct: 308 EGYCSR 313
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M++RG+ PD N L+DG+C D A L + +K S++ LI
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377
Query: 63 NG--GSARI 69
+G S RI
Sbjct: 378 DGLCNSGRI 386
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A GL + +RG+ D T N+L+DG C R+ +LL M + D ++ +I
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 61 LING 64
LI+
Sbjct: 271 LIDA 274
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G+ PD N L++G+C + D A L M K D S++ LI+G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + + + + P ++ N+L+DG C + R ++LL M D +++I
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
Query: 61 LING 64
LI+
Sbjct: 411 LIDA 414
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L +++ G P+ T N +++GFC+ +A + ++ ++G D F++ LIN
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168
Query: 64 GGS 66
G S
Sbjct: 169 GLS 171
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA ++ +G+ PD T N+L+ G CL A EL M SKGC+ D F++++
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 61 LING 64
LI+
Sbjct: 441 LIDS 444
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + MI G PD T N+L+ FC +A +++ +M S GC+ D ++
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 61 LING 64
LI+G
Sbjct: 581 LISG 584
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L E M +G PD T N L+D C + D A +L M GC + +++ LI+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 64 G 64
G
Sbjct: 479 G 479
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D N + E+ Q G PD T N L++G C A A E++ M +G D ++++ +
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 62 ING 64
I+G
Sbjct: 337 ISG 339
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+ ++M+Q G +PD T N+++ G C A E+L M ++ C + +++ LI+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M G T N L+DGFC A++ A E+ M G +++ +++
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 61 LING 64
LI+G
Sbjct: 511 LIDG 514
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + MI R +P+T T N L+ C ++ + A EL + SKG D + +
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 61 LING 64
LI G
Sbjct: 406 LIQG 409
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M GV+ ++ T N L+DG C + R + A +L+ M +G K D ++++ L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 63 N 63
Sbjct: 548 T 548
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M G PD T L+ G C A R + A +LL S+ KG +++
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 61 LING 64
+I G
Sbjct: 616 VIQG 619
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA ++ +G+ PD T N+L+ G CL A EL M SKGC+ D F++++
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 61 LIN 63
LI+
Sbjct: 441 LID 443
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+ L + MI G PD T N+L+ FC +A +++ +M S GC+ D ++
Sbjct: 521 VEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 61 LING 64
LI+G
Sbjct: 581 LISG 584
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L E M +G PD T N L+D C + D A +L M GC + +++ LI+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 64 G 64
G
Sbjct: 479 G 479
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D N + E+ Q G PD T N L++G C A A E++ M +G D ++++ +
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 62 ING 64
I+G
Sbjct: 337 ISG 339
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+ ++M+Q G +PD T N+++ G C A E L M ++ C + +++ LI+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIS 373
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M G T N L+DGFC A++ A E+ M G +++ +++
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 61 LING 64
LI+G
Sbjct: 511 LIDG 514
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M GV+ ++ T N L+DG C + R + A +L+ M +G K D F+++ L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547
Query: 63 N 63
Sbjct: 548 T 548
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + MI R +P+T T N L+ C ++ + A EL + SKG D + +
Sbjct: 346 VKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 61 LING 64
LI G
Sbjct: 406 LIQG 409
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M G PD T L+ G C A R + A +LL S+ KG +++
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNP 615
Query: 61 LING 64
+I G
Sbjct: 616 VIQG 619
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++R ++P T ++L++GFC+ DR D A+++ M SK C D +++ LI
Sbjct: 139 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 198
Query: 63 NG 64
G
Sbjct: 199 KG 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+ + PD T N L+ GFC R + E+ M +G + +++I
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 61 LING 64
LI G
Sbjct: 232 LIQG 235
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M +G+ P+ T ++L+ C R+ A LL M + D F+ S
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 61 LING 64
LI+
Sbjct: 127 LIDA 130
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + +++ LI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 63 NG 64
G
Sbjct: 404 KG 405
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T N L+ GFC A R D EL M +G + +++
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 61 LING 64
LI+G
Sbjct: 437 LIHG 440
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T N+L++GFC +R A L+ M G + D+F+ + LI+G
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + A +L M + D F++S LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 63 NG 64
NG
Sbjct: 369 NG 370
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M++ G PD+ T N L+ G +R A L+ M KGC+ D ++ I
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 61 LINGGSAR 68
++NG R
Sbjct: 227 VVNGLCKR 234
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M + GV PD +T N LM+G+CL AR++ M SKG D FS SI
Sbjct: 317 VSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSI 376
Query: 61 LING 64
L+NG
Sbjct: 377 LVNG 380
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E+MI +G PD + + L++G+C A R D A++L M +G D S++ LI
Sbjct: 354 EARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLI 413
Query: 63 NG 64
+G
Sbjct: 414 SG 415
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M RG+ PDT + N L+ G C A R A EL M S G + ++SI
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446
Query: 61 LIN 63
L++
Sbjct: 447 LLD 449
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A GL M G+ PD T N ++DG C +F AREL + KG + + + +
Sbjct: 457 LDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTP 516
Query: 61 LING 64
I+G
Sbjct: 517 TIDG 520
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E+MIQRG P+T T L+ G C+ DR A +L + M GC D ++ L+
Sbjct: 727 EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 786
Query: 63 NG 64
G
Sbjct: 787 KG 788
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E+MIQRG D T + L+ G C+ R A L +SM GC+ DA ++ L+
Sbjct: 72 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 131
Query: 63 NG 64
G
Sbjct: 132 KG 133
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E+MIQRG D T + L+ G C+ R A L +SM GC+ DA ++ L+
Sbjct: 365 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 424
Query: 63 NG 64
G
Sbjct: 425 KG 426
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E+M+ RG D T + L+ G C+ R A +L +SM GC+ DA ++ L+
Sbjct: 253 EANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 312
Query: 63 NG 64
G
Sbjct: 313 KG 314
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E++IQRG D TC L+ G C+ R +A +L + M GC + + + L+
Sbjct: 546 EANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLM 605
Query: 63 NG 64
G
Sbjct: 606 KG 607
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L M+ G+ PD +T L+D FC + A ELL M +GC D ++S L
Sbjct: 217 EKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTL 276
Query: 62 ING 64
I G
Sbjct: 277 IKG 279
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L E M +G+ PD + L+ GFCL+ ++++A+ L M G + D + S+L
Sbjct: 475 DEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 534
Query: 62 IN 63
I+
Sbjct: 535 ID 536
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M GV P+ + +L+ GFC + + + A+ L M +G + +A ++S++
Sbjct: 837 DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 896
Query: 62 ING 64
I+G
Sbjct: 897 IHG 899
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+ GV PD +T + L+D C + A ELL M +GC + +++ L+
Sbjct: 692 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751
Query: 63 NG 64
G
Sbjct: 752 KG 753
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M +G+ PD + +L+ GFC + ++++A+ L M G + D + +L
Sbjct: 182 DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVL 241
Query: 62 IN 63
I+
Sbjct: 242 ID 243
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M GV PD + +L+ GFC + ++ A+ L M G + D + S+L
Sbjct: 656 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 715
Query: 62 IN 63
I+
Sbjct: 716 ID 717
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ + PD +T + L+D C + A ELL M +GC D ++S LI G
Sbjct: 45 IVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 98
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ PD +T + L+D C + A ELL M +GC D ++S LI G
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK------GCKQD 54
+ +A L M + G P+ TC LM G C + A EL +M S CK +
Sbjct: 579 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 638
Query: 55 AFSHSILING 64
A S+SI+I+G
Sbjct: 639 AISYSIIIDG 648
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 15 GVN--PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+N P+ + + ++DG C R D AREL M + G D S++ LI+G
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 683
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 13 QRGVN--PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
Q G N PD + + ++DG C R D AREL M + G + S++ LI+G
Sbjct: 811 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 864
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P + + ++DG C R D AREL M ++G D S++ LI+G
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHG 502
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L M+ G+ PD +T + L+D C + A +LL + +GC D + + L
Sbjct: 510 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTL 569
Query: 62 ING 64
+ G
Sbjct: 570 VKG 572
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P + + ++DG C R D AREL M ++G D S++ LI+G
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 209
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +LM++ G+ P+T+T N L+DG+CL + D A +LL M G K +++ +I
Sbjct: 505 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTII 564
Query: 63 NGGS 66
NG S
Sbjct: 565 NGYS 568
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ + M + GV PD T ALMD C + AR++ S+ +G K D+ ++ L+
Sbjct: 295 EAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 354
Query: 63 NG 64
+G
Sbjct: 355 HG 356
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L +M+ GV P T N +++G+ R + LL M KG ++ +
Sbjct: 538 MDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEM 597
Query: 61 LING 64
L+ G
Sbjct: 598 LLQG 601
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M+ RG +PD T ++++ D+A ++ M G D ++
Sbjct: 223 LDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 282
Query: 61 LING 64
L++G
Sbjct: 283 LVHG 286
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M Q+G+NPD ++D C A R D A S+ S+G + +
Sbjct: 398 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 457
Query: 61 LING 64
LI+G
Sbjct: 458 LIHG 461
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E+MIQRG P+T T L+ G C+ DR A +L + M GC D ++ L+
Sbjct: 571 EANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 630
Query: 63 NG 64
G
Sbjct: 631 KG 632
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E++IQRG PD TC L+ G C+ R +A +L + M GC + + + L+
Sbjct: 390 EANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLM 449
Query: 63 NG 64
G
Sbjct: 450 KG 451
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E+M+QRG D T + L+ G C+ R A +L +SM GC+ DA ++ L+
Sbjct: 28 EANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 87
Query: 63 NG 64
G
Sbjct: 88 KG 89
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E+MIQRG D T + L+ G C+ R A L +SM GC+ DA ++ L+
Sbjct: 209 EANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLM 268
Query: 63 NG 64
G
Sbjct: 269 KG 270
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G+ PD +T L+D FC + A ELL M +GC D ++S LI G
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKG 54
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M +G+ PD + L+ GFCL+ ++++A+ L M G + D + S+L
Sbjct: 319 DEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 378
Query: 62 IN 63
I+
Sbjct: 379 ID 380
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M GV P+ + +L+ GFC + + + A+ L M +G + +A ++S++
Sbjct: 681 DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 740
Query: 62 ING 64
I+G
Sbjct: 741 IHG 743
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M +G+ PD + +L+ GFC + ++++A+ L M G + D + S+L
Sbjct: 138 DEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSML 197
Query: 62 IN 63
I+
Sbjct: 198 ID 199
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+ GV PD +T + L+D C + A ELL M +GC + +++ L+
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595
Query: 63 NG 64
G
Sbjct: 596 KG 597
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L M+ G+ D +T + L+D C + A ELL M +GC D ++S L
Sbjct: 173 EKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 232
Query: 62 ING 64
I G
Sbjct: 233 IKG 235
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M GV PD + +L+ GFC + ++ A+ L M G + D + S+L
Sbjct: 500 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 559
Query: 62 IN 63
I+
Sbjct: 560 ID 561
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK------GCKQD 54
+ +A L M + G P+ TC LM G C + A EL +M S CK +
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482
Query: 55 AFSHSILING 64
A S+SI+I+G
Sbjct: 483 AISYSIIIDG 492
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 15 GVN--PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+N P+ + + ++DG C R D AREL M + G D S++ LI+G
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L M+ G+ PD +T + L+D C + A +LL + +GC D + + L
Sbjct: 354 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413
Query: 62 ING 64
+ G
Sbjct: 414 VKG 416
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P + + ++DG C R D AREL M ++G D S++ LI+G
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 13 QRGVN--PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
Q G N PD + + ++DG C R D AREL M + G + S++ LI+G
Sbjct: 655 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 708
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P + + ++DG C R D AREL M ++G D S++ LI+G
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 165
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A G+ E MI G +PD T + L+ GF LA + D+A EL +M S+GC+ +A +++ L+
Sbjct: 210 DAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLL 269
Query: 63 NG 64
+G
Sbjct: 270 HG 271
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ L E MI RG P+ T N L+ G C + D A EL M +GC D +++ L
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303
Query: 62 ING 64
+ G
Sbjct: 304 LYG 306
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M+ +G +PD N L+ GF A + AR+L M S+ CK D SH+I
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372
Query: 61 LINGGSARIR 70
+I+G S R
Sbjct: 373 MIDGLSKAKR 382
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA+ L M++RG +PD T L+ GFC + ++A E+ M SKG D +++ L
Sbjct: 279 DEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 338
Query: 62 ING 64
+ G
Sbjct: 339 LKG 341
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS-KGCKQDAFSHSIL 61
EA L ++M+ R PDT + N ++DG A R D A E+ M GC D +++ L
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 409
Query: 62 ING 64
I G
Sbjct: 410 IFG 412
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDA--FSH 58
+D A L E MI+RG PD +T + L++ C AD+ A+E L M + + FS+
Sbjct: 65 VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSY 124
Query: 59 SILIN 63
+ L+N
Sbjct: 125 NSLLN 129
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ ++ +R V PD + + L+DGFC D RA +L M C + +++ +NG
Sbjct: 144 FSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 201
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + MI P+ +T NA ++G R A+ + M S GC D ++S LI+
Sbjct: 176 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIH 235
Query: 64 GGS 66
G S
Sbjct: 236 GFS 238
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 22 TCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
TC++++ C A R D A LL +M +G D +HS+LIN
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLIN 92
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN L + MI +G++P+T T N+LMDG+C+ +R A +L M C D + +
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350
Query: 61 LING 64
LI G
Sbjct: 351 LIKG 354
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM++ +PD T +L+ G+C R D +L + +G + ++SI
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSI 385
Query: 61 LING 64
L+ G
Sbjct: 386 LVQG 389
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT+T N L++G CL + A L+ M GC+ + +++ ++NG
Sbjct: 126 VMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNG 179
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + +RG+ +T T + L+ GFC + + + A EL M S G D ++ I
Sbjct: 361 VDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGI 420
Query: 61 LING 64
L++G
Sbjct: 421 LLDG 424
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M++ G P+ T N++++G C + A +LL M + K D F++S
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210
Query: 61 LIN 63
+I+
Sbjct: 211 IID 213
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M+ GV PD T L+DG C + ++A E+ + D ++I
Sbjct: 396 LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTI 455
Query: 61 LING 64
+I G
Sbjct: 456 IIEG 459
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MIQ GVNP+T T N L+ C ++ D AREL M KGC+ + F+ IL+ G
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRG 195
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L +LM+ GV PDT T L+ G+C + A+ +L M KGC + ++ +
Sbjct: 379 MLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNT 438
Query: 61 LIN 63
L+N
Sbjct: 439 LLN 441
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + MI++G +P+T TCN L++ R A E+L M K + D + +I++
Sbjct: 416 EAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVV 475
Query: 63 NG 64
NG
Sbjct: 476 NG 477
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + + M++ G+ P+ + N +MDG C AR L+ M S G D +++ L+
Sbjct: 346 EGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLL 405
Query: 63 NG 64
+G
Sbjct: 406 HG 407
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ G+ P T N ++ G CLA D A EL SM SKGC+ F+ +I
Sbjct: 201 LNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 61 LINGGSAR 68
LI+ R
Sbjct: 261 LIDAHCKR 268
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + ++ GV P T +L+ G C+A+ FD AREL M +GC ++++
Sbjct: 26 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 85
Query: 61 LINGGSAR 68
+I+ R
Sbjct: 86 MIDASCKR 93
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M++R P T N L+ G C A R ARE+L +M S G D +++
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 61 LING 64
L++G
Sbjct: 366 LVHG 369
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M+ G +PD T N L+ G C A + +RARELL M ++G + +++
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 61 LING 64
L++G
Sbjct: 401 LVSG 404
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + MI+ G PD T N +MDG C + R + A L M GC + SH+
Sbjct: 96 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 155
Query: 61 LING 64
+I G
Sbjct: 156 IILG 159
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG+ P+ T AL+ G C A+R A + M S GC + F+++ LI G
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G PD T + L+ G C R D AR LL M + CK + +
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 61 LING 64
LI+G
Sbjct: 331 LIHG 334
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M + G P+ + N ++ G C + D+A ++ M +K D++S+ I
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGI 190
Query: 61 LING 64
LI+G
Sbjct: 191 LIDG 194
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+Q + P+T T N+L++G C+ R A++ M SKGC + +++
Sbjct: 257 LDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNT 316
Query: 61 LING 64
LING
Sbjct: 317 LING 320
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R V+P+ T N+L++GFC+ R A+ + M SKGC D +++ LI
Sbjct: 808 EAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLI 867
Query: 63 NG 64
G
Sbjct: 868 TG 869
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + +LM+ +G PD T N L+ GFC + R + +L M +G DAF+++
Sbjct: 841 LGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNT 900
Query: 61 LING 64
LI+G
Sbjct: 901 LIHG 904
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A +LM +G P+ T N L++GFC + R + +L M +G D F+++
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351
Query: 61 LING----GSARIRK 71
LI+G G R+ K
Sbjct: 352 LIHGYCQVGKLRVAK 366
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T +L++GFC +RF A L+ SM G + + ++ +ING
Sbjct: 676 MMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVING 729
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L + M + G+ DT T N L+ G+C + A+++ M S G D +H I
Sbjct: 327 VEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386
Query: 61 LING 64
L++G
Sbjct: 387 LLHG 390
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
EA L + M + G+ P+ N +++G C + A E+ M KG DA +++
Sbjct: 701 FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760
Query: 61 LING 64
LI+G
Sbjct: 761 LISG 764
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +R +NPD T AL+D F D A+EL M + +++ LING
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +LM++ G+ P+T+T N L+DG+CL + D A +LL M G K +++ +I
Sbjct: 506 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTII 565
Query: 63 NGGS 66
NG S
Sbjct: 566 NGYS 569
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ + M + GV PD T ALMD C + AR++ S+ +G K D+ ++ L+
Sbjct: 296 EAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 355
Query: 63 NG 64
+G
Sbjct: 356 HG 357
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L +M+ GV P T N +++G+ R + LL M KG ++ +
Sbjct: 539 MDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEM 598
Query: 61 LING 64
L+ G
Sbjct: 599 LLQG 602
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M+ RG +PD T ++++ D+A ++ M G D ++
Sbjct: 224 LDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 283
Query: 61 LING 64
L++G
Sbjct: 284 LVHG 287
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M Q+G+NPD ++D C A R D A S+ S+G + +
Sbjct: 399 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 458
Query: 61 LING 64
LI+G
Sbjct: 459 LIHG 462
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T ++++DGFC +R D A + M +KGC + + + LI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 403 DGYCGAKRI 411
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ SMGSK + + + LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 63 NG 64
NG
Sbjct: 589 NG 590
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +P+ T N L+DG+C A R D ELL M G D +++
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 61 LING 64
LI+G
Sbjct: 436 LIHG 439
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +P+ T L++G+C A R D EL MG +G +A ++
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 61 LING 64
LI G
Sbjct: 622 LICG 625
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++R ++PD T NAL++ F +F A EL M +G + ++S +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 63 NG 64
+G
Sbjct: 368 DG 369
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M ++G+ PD T N+++ GFC + R+ A +LL M + D +++ LI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 63 NG 64
N
Sbjct: 333 NA 334
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G++PD T L+ G C+ DR A + M C+ + + + L+NG
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNG 193
Score = 35.0 bits (79), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L + MI G+ PD TC+ L+DG C + A E+ M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 506 GVEPDVQTYNILISG 520
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M + G+ DT+T N L+ GF L + A +LL M S G D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 61 LING 64
L++G
Sbjct: 471 LLDG 474
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T ++++DGFC +R D A + M +KGC + + + LI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 403 DGYCGAKRI 411
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ SMGSK + + + LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 63 NG 64
NG
Sbjct: 589 NG 590
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +P+ T N L+DG+C A R D ELL M G D +++
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 61 LING 64
LI+G
Sbjct: 436 LIHG 439
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +P+ T L++G+C A R D EL MG +G +A ++
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 61 LING 64
LI G
Sbjct: 622 LICG 625
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++R ++PD T NAL++ F +F A EL M +G + ++S +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 63 NG 64
+G
Sbjct: 368 DG 369
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M ++G+ PD T N+++ GFC + R+ A +LL M + D +++ LI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 63 NG 64
N
Sbjct: 333 NA 334
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G++PD T N L+ G C+ DR A L M C+ + + + L+NG
Sbjct: 140 LTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193
Score = 35.0 bits (79), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L + MI G+ PD TC+ L+DG C + A E+ M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 506 GVEPDVQTYNILISG 520
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M + G+ DT+T N L+ GF L + A +LL M S G D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 61 LING 64
L++G
Sbjct: 471 LLDG 474
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T ++++DGFC +R D A + M +KGC + + + LI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 403 DGYCGAKRI 411
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ SMGSK + + + LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 63 NG 64
NG
Sbjct: 589 NG 590
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +P+ T N L+DG+C A R D ELL M G D +++
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 61 LING 64
LI+G
Sbjct: 436 LIHG 439
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +P+ T L++G+C A R D EL MG +G +A ++
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 61 LING 64
LI G
Sbjct: 622 LICG 625
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++R ++PD T NAL++ F +F A EL M +G + ++S +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 63 NG 64
+G
Sbjct: 368 DG 369
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M ++G+ PD T N+++ GFC + R+ A +LL M + D +++ LI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 63 NG 64
N
Sbjct: 333 NA 334
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G++PD T N L+ G C+ DR A L M C+ + + + L+NG
Sbjct: 140 ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L + MI G+ PD TC+ L+DG C + A E+ M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 506 GVEPDVQTYNILISG 520
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M + G+ DT+T N L+ GF L + A +LL M S G D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 61 LING 64
L++G
Sbjct: 471 LLDG 474
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T ++++DGFC +R D A + M +KGC + + + LI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 403 DGYCGAKRI 411
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ SMGSK + + + LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 63 NG 64
NG
Sbjct: 589 NG 590
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +P+ T N L+DG+C A R D ELL M G D +++
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 61 LING 64
LI+G
Sbjct: 436 LIHG 439
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +P+ T L++G+C A R D EL MG +G +A ++
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 61 LING 64
LI G
Sbjct: 622 LICG 625
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++R ++PD T NAL++ F +F A EL M +G + ++S +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 63 NG 64
+G
Sbjct: 368 DG 369
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M ++G+ PD T N+++ GFC + R+ A +LL M + D +++ LI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 63 NG 64
N
Sbjct: 333 NA 334
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G++PD T L+ G C+ DR A L M C+ + + + L+NG
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L + MI G+ PD TC+ L+DG C + A E+ M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 506 GVEPDVQTYNILISG 520
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M + G+ DT+T N L+ GF L + A +LL M S G D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 61 LING 64
L++G
Sbjct: 471 LLDG 474
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P+T T ++++DGFC +R D A + M +KGC + + + LI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 63 NG--GSARI 69
+G G+ RI
Sbjct: 403 DGYCGAKRI 411
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ SMGSK + + + LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 63 NG 64
NG
Sbjct: 589 NG 590
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +P+ T N L+DG+C A R D ELL M G D +++
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 61 LING 64
LI+G
Sbjct: 436 LIHG 439
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +P+ T L++G+C A R D EL MG +G +A ++
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 61 LING 64
LI G
Sbjct: 622 LICG 625
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++R ++PD T NAL++ F +F A EL M +G + ++S +I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 63 NG 64
+G
Sbjct: 368 DG 369
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M ++G+ PD T N+++ GFC + R+ A +LL M + D +++ LI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 63 NG 64
N
Sbjct: 333 NA 334
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G++PD T N L+ G C+ DR A L M C+ + + + L+NG
Sbjct: 140 ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNG 193
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L + MI G+ PD TC+ L+DG C + A E+ M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 506 GVEPDVQTYNILISG 520
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M + G+ DT+T N L+ GF L + A +LL M S G D +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 61 LING 64
L++G
Sbjct: 471 LLDG 474
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 42/62 (67%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + +M+++G+NP+ T ++LMDG+CL + + A+ + +M +G + +S++I+I
Sbjct: 153 EAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMI 212
Query: 63 NG 64
NG
Sbjct: 213 NG 214
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG PD T ++L+D C + D+A LL ++ +G + + ++++ILI+G
Sbjct: 262 LVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDG 319
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+ + E ++ +G N +T ++ GFC FD A LL M C +A ++ I
Sbjct: 326 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEI 385
Query: 61 LI 62
+I
Sbjct: 386 II 387
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L E M R + PD T N+L++G C + + A +L+ M +G D ++S L
Sbjct: 222 DEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSL 281
Query: 62 ING 64
++
Sbjct: 282 LDA 284
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A G+ M RGV + + N +++GFC D A L M + D +++
Sbjct: 186 VNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNS 245
Query: 61 LING 64
LING
Sbjct: 246 LING 249
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M+ +G+ PDT T NA++ G C D+A ELL S+ S+GCK D +++I
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283
Query: 61 LI 62
L+
Sbjct: 284 LL 285
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M ++G+ PD + L+ GFC R D A E L M S GC D +++
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNT 388
Query: 61 LING 64
++ G
Sbjct: 389 IMAG 392
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ AN + + M RG PD T N ++ FC + D A E+ + C+ +++I
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213
Query: 61 LING 64
LI
Sbjct: 214 LIEA 217
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A E MI G PD N +M G C + D+A E+ + GC + S++
Sbjct: 364 LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423
Query: 61 LING 64
L +
Sbjct: 424 LFSA 427
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L MI G P+ T + L+ C + + A LL SM KG K DA+ + LI
Sbjct: 296 EGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLI 355
Query: 63 NG 64
G
Sbjct: 356 AG 357
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M P+ + N ++ G C +R + A E+L +M KGC+ + ++ +
Sbjct: 469 VDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYIL 528
Query: 61 LING 64
LI G
Sbjct: 529 LIEG 532
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ +G++PD T N+L+ C D A ELLV M S + + S++I++ G
Sbjct: 444 LLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLG 497
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
+++R PD NAL+ GF A++ + A +L M S+G D +++I+I +R
Sbjct: 129 ILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSR 186
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L +M ++G P+ T A++DGF A + D+ EL MGSKGC + ++++L
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826
Query: 62 IN 63
IN
Sbjct: 827 IN 828
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E M G P+T +AL+DGFC A + D A+E+ M G + +++S LI
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLI 722
Query: 63 N 63
+
Sbjct: 723 D 723
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DG C A + AR+LL +M GC+ + + LI+G
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDG 689
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
AN L ELMI +G P+ T AL+DG+C + ++A ++ M
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L + M +NPD T N LM G C +F+ AREL+ M +G K D S++
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 543 LISGYSKK 550
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L E ++ +G+ PD N LMDG C DRA LL M D +++ L+
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 63 NG 64
G
Sbjct: 510 RG 511
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A G +M G+ P T N L+ GF L R + AR ++ M SKG + D +++
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 61 LIN 63
+++
Sbjct: 301 ILS 303
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G+ P T N L+ G + ++ + A L+ + KG D+ +++ILING
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + +M+++G+ P+ T +LMDG+CL ++A+ +L +M +G D S++I
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342
Query: 61 LING 64
LI+G
Sbjct: 343 LIDG 346
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M QRGVNPD + N L+DGFC + D A L M K D +++
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 377
Query: 61 LING 64
LI+G
Sbjct: 378 LIDG 381
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RGV PD T ++++D C + D+A LL + +G + + ++++ILI+G
Sbjct: 394 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+ + E ++ +G N +T ++ GFC FD A LL M C DA ++ I
Sbjct: 458 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEI 517
Query: 61 LI 62
+I
Sbjct: 518 II 519
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + PD T N+L+DG C + A +L+ M +G D ++S
Sbjct: 353 VDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 412
Query: 61 LING 64
+++
Sbjct: 413 ILDA 416
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L MI + PD T N L+DGFC + + + M +G K + ++
Sbjct: 248 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 307
Query: 61 LING 64
L++G
Sbjct: 308 LMDG 311
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ +G++P+ T +AL+ GF + A +L M + K D ++ +I
Sbjct: 213 VNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNI 272
Query: 61 LING 64
L++G
Sbjct: 273 LVDG 276
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A G+ E M+ G +PD T + L+ GF LA + D+A EL +M S+GC+ +A +++ L+
Sbjct: 535 DAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLL 594
Query: 63 NG 64
+G
Sbjct: 595 HG 596
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ L E MI RG P+ T N L+ G C + D A EL M +GC D +++ L
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628
Query: 62 ING 64
+ G
Sbjct: 629 LYG 631
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA+ L M++RG +PD T L+ GFC + ++A E+ M SKG D +++ L
Sbjct: 604 DEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663
Query: 62 ING 64
+ G
Sbjct: 664 LKG 666
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M+ +G +PD N L+ GF A + A++L M S+ CK D SH+I
Sbjct: 638 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNI 697
Query: 61 LINGGSARIR 70
+I+G S R
Sbjct: 698 MIDGLSKAKR 707
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS-KGCKQDAFSHSIL 61
EA L ++M+ R PDT + N ++DG A R D A E+ M GC D +++ L
Sbjct: 675 EAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 734
Query: 62 ING 64
I G
Sbjct: 735 IFG 737
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
R + P + TC++++ C A R D A LL +M +G D +HS+LIN
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLIN 417
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK 49
+D A L E MI+RG PD +T + L++ C AD+ A+E L M K
Sbjct: 390 VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK 438
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + MI P+ +T NA ++G R A+ + M + GC D ++S LI+
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIH 560
Query: 64 GGS 66
G S
Sbjct: 561 GFS 563
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ ++ +R PD + + L+DGFC D RA +L M C + +++ +NG
Sbjct: 469 FSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 526
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L +M ++G P+ T A++DGF A + D+ EL MGSKGC + ++++L
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826
Query: 62 IN 63
IN
Sbjct: 827 IN 828
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E M G P+T +AL+DGFC A + D A+E+ M +G + +++S LI
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLI 722
Query: 63 N 63
+
Sbjct: 723 D 723
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DG C A + AR+LL +M GC+ + + LI+G
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDG 689
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
AN L ELMI +G P+ T AL+DG+C + ++A ++ M
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M++RG NP+ T ++L+D R D ++L M C + ++
Sbjct: 696 LDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755
Query: 61 LINGGS 66
+I+G S
Sbjct: 756 MIDGLS 761
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A LA ++ +GV PD T N+L+ G CL + A EL M KGC D F++SI
Sbjct: 388 VEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSI 447
Query: 61 LI 62
LI
Sbjct: 448 LI 449
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + MI G+ PD T ++ FC RA +++ +M GC+ D ++
Sbjct: 528 VEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGT 587
Query: 61 LING 64
LI G
Sbjct: 588 LIGG 591
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+ + M+++G D T N+L+ G C D A E+L M S+ C+ + +++ LI
Sbjct: 324 MMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLI 379
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M ++G +PD T + L++ C R A LL M GC ++ ++ LI+G
Sbjct: 429 LFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDG 486
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ R P+T T N L+ C + + A EL + SKG D + +
Sbjct: 353 IDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNS 412
Query: 61 LING 64
LI G
Sbjct: 413 LIQG 416
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ G PD T NAL++G C + E++ M KG + D ++++ LI+G
Sbjct: 295 EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISG 346
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + M GV+ + T N L++G C + R + A +L+ M +G K D F+++ ++
Sbjct: 495 DAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTML 554
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +LM++ V PD + N L+DG CL R D A +LL M S G K D F+++ L+
Sbjct: 465 EAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLL 524
Query: 63 NG 64
+G
Sbjct: 525 HG 526
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L ++M+ G+ PD T N L+ G+C A R D A L M KG +++
Sbjct: 498 IDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNT 557
Query: 61 LING 64
+++G
Sbjct: 558 ILHG 561
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ +G+ P T N ++ G RF A+EL ++M + K D ++++I
Sbjct: 533 IDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTI 592
Query: 61 LING 64
++NG
Sbjct: 593 ILNG 596
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
MI GV PD ++L+ G C D++++A +L + +G + +A +IL+
Sbjct: 403 MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILM 454
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG+ P T T ++++DGFC +R D A + M +KGC D + + LI
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368
Query: 63 NG 64
G
Sbjct: 369 AG 370
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T N+++ G C R D A ++ SMGSK + + + LI
Sbjct: 495 EAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554
Query: 63 NG 64
NG
Sbjct: 555 NG 556
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM +G +PD T N L+ G+C A R D +LL M G + +++
Sbjct: 342 LDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 401
Query: 61 LING 64
LI+G
Sbjct: 402 LIHG 405
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +P+ T L++G+C A R D EL MG +G +A ++
Sbjct: 528 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 587
Query: 61 LING 64
LI+G
Sbjct: 588 LIHG 591
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L + M+ GV P+ TCN L+DG C + A E+ +M
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 472 GVEPDVQTYNILISG 486
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
EA L + M++R ++PD T NAL++ F +F A EL M +G ++S +
Sbjct: 273 EAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSM 332
Query: 62 ING 64
I+G
Sbjct: 333 IDG 335
>gi|147742769|gb|ABQ50550.1| hypothetical protein [Brassica rapa]
Length = 281
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG++PDT T +L+ G C+ +R D A +++ M SKGC+ ++ LING
Sbjct: 1 MVPRGIDPDTITYTSLIYGLCMENRLDEANQMMDLMVSKGCEPSIVTYGTLING 54
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + +LM+ +G P T L++G+C A R +L + +G + ++S
Sbjct: 26 LDEANQMMDLMVSKGCEPSIVTYGTLINGYCKAKRVVDGMKLFREISLRGLVANTVTYST 85
Query: 61 LING 64
LI G
Sbjct: 86 LIQG 89
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG+ +T T + L+ GFC A + + A+EL M S+G ++ IL++G
Sbjct: 74 RGLVANTVTYSTLIQGFCEAGKLNVAKELFQEMVSRGVSPSVVTYGILLDG 124
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M+ G+ P T N ++ G CLA D A EL SM SKGC+ F+ +I
Sbjct: 201 LNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 61 LINGGSAR 68
LI+ R
Sbjct: 261 LIDAHCKR 268
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + ++ GV P T +L+ G C+A+ FD AREL M +GC ++++
Sbjct: 26 LNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 85
Query: 61 LINGGSAR 68
+I+ R
Sbjct: 86 IIDASCKR 93
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M++R P T N L+ G C A R ARE+L +M S G D +++
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 61 LING 64
L++G
Sbjct: 366 LVHG 369
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M+ G +PD T N L+ G C A + +RARELL M ++G + +++
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 61 LING 64
L++G
Sbjct: 401 LVSG 404
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L + M G PD T + L+ G C R D AR LL M + CK + +
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 61 LING 64
LI+G
Sbjct: 331 LIHG 334
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A L M+ RG+ P+ T AL+ G C A+R A + M S GC + F+++ L
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 436
Query: 62 ING 64
I G
Sbjct: 437 ILG 439
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + MI+ G PD T N +MDG C + R + A L M GC + SH+
Sbjct: 96 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNT 155
Query: 61 LING 64
+I G
Sbjct: 156 IILG 159
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E+M + GV PD T +ALMDG+CL + D A++L M KG ++ILI
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILI 358
Query: 63 NG 64
NG
Sbjct: 359 NG 360
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M R + PDT T + LM GFC A R A++L M S G D+ ++SI
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426
Query: 61 LING 64
L++G
Sbjct: 427 LLDG 430
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L ++M+ +G P N L++G C + R + A+ LL M + D ++S
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391
Query: 61 LING 64
L+ G
Sbjct: 392 LMQG 395
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + MI R V P+T T L+DG C AR + M G + DA+++S
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321
Query: 61 LING 64
L++G
Sbjct: 322 LMDG 325
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + P N L+ G C + + AREL ++ KG + ++++
Sbjct: 437 LDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTV 496
Query: 61 LING 64
+I+G
Sbjct: 497 MISG 500
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MIQ GV PD T ALMDG CL D A ++ M GC + S++ LI
Sbjct: 249 EAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLI 308
Query: 63 NG 64
NG
Sbjct: 309 NG 310
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + + ++PD N +DG C A + AR+L ++ +G + D ++H+I+I
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMI 448
Query: 63 NGGSAR 68
G R
Sbjct: 449 RGLCKR 454
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + ++M++ G + + N L++G+C R D+A L M + + ++S
Sbjct: 282 MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYST 341
Query: 61 LING 64
LI+G
Sbjct: 342 LIHG 345
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M+ G P+ T LM+G C + A L M +KG D F+++ LI
Sbjct: 144 EALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLI 203
Query: 63 NG 64
+
Sbjct: 204 HA 205
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +LMI+ G P T N+LM+ FC + + DRA L+ M +GC D +++
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 61 LING 64
+I G
Sbjct: 282 VIAG 285
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L ++M +RG PD N ++ G C R D A+ LL M + C D ++S
Sbjct: 257 VDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316
Query: 61 LING 64
+I+G
Sbjct: 317 IIDG 320
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L +LM + G P+ T + L++G C A R D+ LL M +G + D ++
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211
Query: 61 LING 64
L+NG
Sbjct: 212 LLNG 215
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ L + M +RG PD N L++G C + R D A EL+ M GC +++ L
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 62 IN 63
+
Sbjct: 248 ME 249
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T +++G C + DRA ELL M GC + ++S+L+ G
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG 180
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + ELM++ P +T N+++DG C R + A ++ M K C D S+
Sbjct: 438 VDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGA 496
Query: 61 LING 64
LI G
Sbjct: 497 LIRG 500
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M RG+ P + N ++ G C A RF A ++ C D + +I
Sbjct: 46 LDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI 105
Query: 61 LING 64
L++
Sbjct: 106 LVDA 109
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFD------RARELLVSMGSKGCKQD 54
+D+A L + M+ PD T + ++DG C R D A E+L M GC +
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351
Query: 55 AFSHSILING 64
A +++++I G
Sbjct: 352 AGTYAVVIEG 361
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + E MI + PD ++ AL+ G C + A EL ++ +KG + +++
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNV 531
Query: 61 LIN 63
L+N
Sbjct: 532 LVN 534
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G+ P T T N+++DGFC +R + AR+++ SM S+GC D + S LI G
Sbjct: 362 MLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKG 415
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L M++R + P T T ++++DGFC R + A+ + M SKGC D + + LI+
Sbjct: 169 AEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLID 228
Query: 64 G 64
G
Sbjct: 229 G 229
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M+ G +PD T + L+ G+C A R D EL M +G D +++
Sbjct: 387 LEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNA 446
Query: 61 LING 64
LI+G
Sbjct: 447 LIHG 450
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + MI GV+PD TCN L+ G C + ++A E+ D + +I+IN
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIIN 309
Query: 64 G 64
G
Sbjct: 310 G 310
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 19 DTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
DT+TCN +++G C ++ D A +L S+ G + D +++ILI
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILI 343
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + M ++G+ P+ T N ++DG+C ++ A +LL M + D + S LI
Sbjct: 98 KAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALI 157
Query: 63 NG 64
N
Sbjct: 158 NA 159
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADR-----------FDRARELLVSMGSK 49
+++A + +LM+ +G +PD T N L+DG C A R + A++L M S
Sbjct: 201 LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISN 260
Query: 50 GCKQDAFSHSILING 64
G D + + L+ G
Sbjct: 261 GVSPDIVTCNTLLAG 275
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M QRG+ DT T NAL+ GFC + A+++ M S G D +
Sbjct: 422 VDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRS 481
Query: 61 LING 64
++ G
Sbjct: 482 MLAG 485
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +LMI+ GV P+ + N L+ G CL R D A +LL M S G K + F+++IL+
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILL 518
Query: 63 NG 64
G
Sbjct: 519 RG 520
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ +GV P +T N ++ G RF A EL ++M + K D ++++I
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586
Query: 61 LING 64
++NG
Sbjct: 587 ILNG 590
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + MI RGV PD T N L+ G+ ++ ++L M + G + D ++++
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 61 LIN 63
L++
Sbjct: 272 LLD 274
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L ++M+ G+ P+ T L+ G+C A R D A L M KG +++
Sbjct: 492 IDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNT 551
Query: 61 LING 64
+++G
Sbjct: 552 ILHG 555
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ +G+ P+ T ++DG C A DRA+ + M +G K D +++
Sbjct: 177 VEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNC 236
Query: 61 LING 64
LI+G
Sbjct: 237 LIHG 240
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + E M G+ PD T L+D C R AR SM KG K D ++IL+
Sbjct: 249 EVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILL 308
Query: 63 NGGSAR 68
+G + +
Sbjct: 309 HGYATK 314
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + MI+R + PD T N LMDG C A + D A++LL M GC D +++ L+
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436
Query: 63 NG 64
NG
Sbjct: 437 NG 438
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ + E M + G PD T N L+DG C + D+A EL +M GC D S+S+
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364
Query: 61 LING 64
++NG
Sbjct: 365 VLNG 368
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN L E M+ G+ P T N+L++ FC + A EL +M KG + D ++S
Sbjct: 59 VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118
Query: 61 LING 64
+I+G
Sbjct: 119 IISG 122
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI+RG + +T NAL++G C + +RA +LL M SKG D +++ +++G
Sbjct: 140 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + +I +G PDT T N+++ G D A E+ M + GC + ++SI+
Sbjct: 236 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIV 295
Query: 62 ING 64
++G
Sbjct: 296 LSG 298
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ G P+ +T + ++ G C A + D A ++L M G D +++I
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329
Query: 61 LING 64
L++G
Sbjct: 330 LLDG 333
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLV-SMGSKGCKQDAFSHS 59
M EA L + M ++G PD T + ++ G C + A E+L M +GC + +++
Sbjct: 94 MKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYN 153
Query: 60 ILING 64
LING
Sbjct: 154 ALING 158
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E M +G PD T N ++ G C + A++ SM S+G D +++
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224
Query: 61 LING 64
L++
Sbjct: 225 LLDA 228
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+ G++PD N L+DG+ R D A L M S G + ++++ L+N
Sbjct: 30 LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNA 87
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +LMI+ G P T N+LM+ FC + + DRA L+ M +GC D +++
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 61 LING 64
+I G
Sbjct: 282 VIAG 285
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L ++M +RG PD N ++ G C R D A+ LL M + C D ++S
Sbjct: 257 VDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316
Query: 61 LING 64
+I+G
Sbjct: 317 IIDG 320
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L +LM + G P+ T + L++G C A R D+ LL M +G + D ++
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211
Query: 61 LING 64
L+NG
Sbjct: 212 LLNG 215
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ L + M +RG PD N L++G C + R D A EL+ M GC +++ L
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 62 IN 63
+
Sbjct: 248 ME 249
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T +++G C + DRA ELL M GC + ++S+L+ G
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG 180
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + ELM++ P +T N+++DG C R + A ++ M K C D S+
Sbjct: 438 VDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGA 496
Query: 61 LING 64
LI G
Sbjct: 497 LIRG 500
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFD------RARELLVSMGSKGCKQD 54
+D+A L + M+ PD T + ++DG C R D A E+L M GC +
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351
Query: 55 AFSHSILING 64
A +++++I G
Sbjct: 352 AGTYAVVIEG 361
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M RG+ P + N ++ G C A RF A ++ C D + +I
Sbjct: 46 LDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI 105
Query: 61 LING 64
L++
Sbjct: 106 LVDA 109
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + E MI + PD ++ AL+ G C + A EL ++ +KG + +++
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNV 531
Query: 61 LIN 63
L+N
Sbjct: 532 LVN 534
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN L + MI RG++P+ T N LMDG+C+ +R A +L M C D + +
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 363
Query: 61 LING 64
LI G
Sbjct: 364 LIKG 367
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM++ +PD T +L+ G+C+ R D ++ ++ +G +A ++SI
Sbjct: 339 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 398
Query: 61 LING 64
L+ G
Sbjct: 399 LVQG 402
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
A L + MIQRG+ P+T T ++L+DGFC +R D A ++L M +KG
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PD T N++++G C + A +LL M + K D F++S
Sbjct: 164 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 223
Query: 61 LIN 63
+I+
Sbjct: 224 IID 226
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT+T N L+ G L + A L+ M GC+ D +++ ++NG
Sbjct: 139 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 192
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+RG+ + T + L+ GFC + + A EL M S G D ++ IL++G
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 437
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T ++++DG C R D A ++ SMGSK D + + LI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586
Query: 63 NG 64
G
Sbjct: 587 TG 588
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ R + P T T ++++DGFC +R D A + +KGC D + + LI
Sbjct: 341 EAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLI 400
Query: 63 NG 64
G
Sbjct: 401 AG 402
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +PD T N L+ G+C A D EL MG +G DA ++
Sbjct: 560 LDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYIT 619
Query: 61 LING 64
LI G
Sbjct: 620 LIYG 623
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + L +G +PD T N L+ G+C A R D +LL M G + +++
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433
Query: 61 LING 64
LI+G
Sbjct: 434 LIHG 437
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L M ++ + PD T N +++GFC++ R+ A +LL M + D + S LI
Sbjct: 271 DAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALI 330
Query: 63 NG 64
N
Sbjct: 331 NA 332
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK----------- 49
++ A L + MI GV P+ TCN L+DG C + A E+ +M
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI G
Sbjct: 504 GVEPDVQTYNILICG 518
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L E+MIQR + PD T N L+DGFC ++ EL M S+ + S+ I
Sbjct: 619 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 678
Query: 61 LING 64
LING
Sbjct: 679 LING 682
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++GV PD T N L++ +C + A EL+ SM KG K F+++ +ING
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M+++G TCN ++ G+C A +A E L +M KG D +++
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748
Query: 61 LING 64
LING
Sbjct: 749 LING 752
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M+ +G+ PD T N L++GF + DRA L+ M + G D ++++++NG S + R
Sbjct: 734 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 793
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M+++G D T N +++G C A EL M +G D ++ +
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 608
Query: 61 LING 64
LING
Sbjct: 609 LING 612
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L M G+ PD T N +++GF R A +++ M +G D +++
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 818
Query: 61 LING 64
LING
Sbjct: 819 LING 822
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M +G+ P T NA+++G C ++ RA+ +L M G D +++I
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468
Query: 61 LI 62
L+
Sbjct: 469 LL 470
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A G+ + M++ G++PDT+T N L+ C D A + M S+G D S S LI
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 505
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L M +RGV PD T L++G+ ++A L M + K D +++
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643
Query: 61 LING 64
LI+G
Sbjct: 644 LIDG 647
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L +M ++GV PD + LMDG+CL +A+++ + M G D +S++I+I
Sbjct: 238 ESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIII 297
Query: 63 NG 64
NG
Sbjct: 298 NG 299
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL MI + +NP+ T N L+D C + ++ LL M KG K D +SIL+
Sbjct: 203 EAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILM 262
Query: 63 NG 64
+G
Sbjct: 263 DG 264
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+M+Q GVNPD + N +++G C R D A LL M K D ++S LI+G
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDG 334
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +RG+ P+ T AL+DG C R + + L + KG D +++++
Sbjct: 376 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTV 435
Query: 61 LING 64
+I+G
Sbjct: 436 MISG 439
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG + T N+L+DG C D+A L + M +G + + ++++ LI+G
Sbjct: 347 LTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 404
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M RG+ PD T L+ GFCLA + A LL M K + ++++
Sbjct: 166 VDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNT 225
Query: 61 LIN 63
LI+
Sbjct: 226 LID 228
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+ + + PDT T ++L+DG C R +L M +G + +++
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365
Query: 61 LING 64
L++G
Sbjct: 366 LLDG 369
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G P+T N LM G CL ++ + ++G + D S+ IL+NG
Sbjct: 71 ILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNG 124
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A GL M +RG P T N L+D C A R AR+L M GC D++++S
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST 245
Query: 61 LING 64
L+NG
Sbjct: 246 LVNG 249
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD L + M ++G +PD + N +MD A++ D ARE+ M GCK D S++I
Sbjct: 291 MDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNI 350
Query: 61 LIN 63
LI+
Sbjct: 351 LID 353
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L + M +GV PDT + +DG DR D A L M + GC D + ILI
Sbjct: 437 LFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M G PD T N LMD RA L M KG + D S+++
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455
Query: 61 LING 64
I+G
Sbjct: 456 RIDG 459
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ + M+ RGV D N+L+ A DR +L+ M KG DAFS +
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNT 315
Query: 61 LING 64
+++
Sbjct: 316 IMDA 319
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M++ G P+T T N+L+ + D A +L M + GC+ D +++ L+
Sbjct: 363 QARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422
Query: 63 N 63
+
Sbjct: 423 D 423
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ + ++MI RGV P+ T NALMDG CL D A ++ +M G + S++
Sbjct: 295 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 354
Query: 61 LING 64
LING
Sbjct: 355 LING 358
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + + ++PD ++DG C A + AR++ ++ SKG + + +++I
Sbjct: 434 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 493
Query: 61 LING 64
+ING
Sbjct: 494 MING 497
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ G P+ + N L++G+C R D+A L M C+++ +++
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEM----CQKELIPNTV 385
Query: 61 LIN 63
N
Sbjct: 386 TYN 388
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + +G+ P+ T +++G C D A +L + M GC D +++
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528
Query: 61 LING 64
+ G
Sbjct: 529 ITQG 532
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
NGLA +M+++G+ PD T N+LMD +CL + ++A+ + +M +G + S+SI+IN
Sbjct: 332 NGLA-MMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMIN 389
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A GL M +NPD T N L+D FC R A+ L M +G K D +++
Sbjct: 292 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNS 351
Query: 61 LIN 63
L++
Sbjct: 352 LMD 354
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L M+ + + PD +T NAL++GFC+ + A L M S+ D ++ +IL
Sbjct: 258 NDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 317
Query: 62 ING 64
++
Sbjct: 318 VDA 320
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G N +T ++ GFC FD A LL M C +A ++ I
Sbjct: 483 LEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEI 542
Query: 61 LI 62
+I
Sbjct: 543 II 544
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN L + MI RG++P+ T N LMDG+C+ +R A +L M C D + +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 61 LING 64
LI G
Sbjct: 374 LIKG 377
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM++ +PD T +L+ G+C+ R D ++ ++ +G +A ++SI
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 61 LING 64
L+ G
Sbjct: 409 LVQG 412
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PD T N++++G C + A +LL M + K D F++S
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 61 LING 64
+I+
Sbjct: 234 IIDS 237
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT+T N L+ G L + A L+ M GC+ D +++ ++NG
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+RG+ + T + L+ GFC + + A EL M S G D ++ IL++G
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ + ++MI RGV P+ T NALMDG CL D A ++ +M G + S++
Sbjct: 293 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 352
Query: 61 LING 64
LING
Sbjct: 353 LING 356
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + + ++PD ++DG C A + AR++ ++ SKG + + +++I
Sbjct: 433 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 492
Query: 61 LING 64
+ING
Sbjct: 493 MING 496
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + M+ G P+ + N L++G+C R D+A L M K + +++
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 387
Query: 61 LING 64
L++G
Sbjct: 388 LMHG 391
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L E M Q+ + P+T T N LM G C R A L M + G D ++ I
Sbjct: 363 MDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRI 422
Query: 61 LIN 63
L++
Sbjct: 423 LLD 425
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G+ PDT+T L+ G C+ + A L M +G + + ++ LING
Sbjct: 128 ILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLING 181
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + +G+ P+ T +++G C D A +L + M GC D +++
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527
Query: 61 LING 64
+ G
Sbjct: 528 ITQG 531
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M+++G+ P+ TCN L+ G+C + +A E L M S G D+FS++
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 61 LING 64
LI+G
Sbjct: 648 LIDG 651
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L E M++ + PD T N L+DGFC A RA+EL M K D S+
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577
Query: 61 LING 64
++NG
Sbjct: 578 VLNG 581
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L RG+ P T NA++ G C ++DRA+++L+ M G +A +++
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 61 LI 62
L+
Sbjct: 368 LL 369
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L M++RG+ PD T L+ G+C D+A L +M K D +++ LI
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Query: 63 NG 64
+G
Sbjct: 545 DG 546
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A MI G+ PD+ + N L+DG+ ++A L+ M +G + + ++++
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682
Query: 61 LINGGSA 67
++NG A
Sbjct: 683 ILNGFCA 689
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M +RG+ + T N +++GFC + A ++L M G D ++S
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 61 LING 64
LING
Sbjct: 718 LING 721
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L E+MIQR + PD T N L+DGFC ++ EL M S+ + S+ I
Sbjct: 515 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 574
Query: 61 LING 64
LING
Sbjct: 575 LING 578
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++GV PD T N L++ +C + A EL+ SM KG K F+++ +ING
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M+++G TCN ++ G+C A +A E L +M KG D +++
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644
Query: 61 LING 64
LING
Sbjct: 645 LING 648
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M+ +G+ PD T N L++GF + DRA L+ M + G D ++++++NG S + R
Sbjct: 630 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 689
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L M G+ PD T N +++GF R A +++ M +G D +++
Sbjct: 655 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 714
Query: 61 LING 64
LING
Sbjct: 715 LING 718
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M+++G D T N +++G C A EL M +G D ++ +
Sbjct: 445 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 504
Query: 61 LINGGS 66
LING S
Sbjct: 505 LINGYS 510
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L M +RGV PD T L++G+ ++A L M + K D +++
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539
Query: 61 LING 64
LI+G
Sbjct: 540 LIDG 543
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A G+ + M++ G++PDT+T N L+ C D A + M S+G D S S LI
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 401
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M +G+ P T NA+++G C ++ RA+ +L M G D +++I
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364
Query: 61 LI 62
L+
Sbjct: 365 LL 366
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M+++G+ P+ TCN L+ G+C + +A E L M S G D+FS++
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 61 LING 64
LI+G
Sbjct: 648 LIDG 651
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L E M++ + PD T N L+DGFC A RA+EL M K D S+
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577
Query: 61 LING 64
++NG
Sbjct: 578 VLNG 581
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L RG+ P T NA++ G C ++DRA+++L+ M G +A +++
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 61 LI 62
L+
Sbjct: 368 LL 369
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L M++RG+ PD T L+ G+C D+A L +M K D +++ LI
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Query: 63 NG 64
+G
Sbjct: 545 DG 546
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A MI G+ PD+ + N L+DG+ ++A L+ M +G + + ++++
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682
Query: 61 LINGGSA 67
++NG A
Sbjct: 683 ILNGFCA 689
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M +RG+ + T N +++GFC + A ++L M G D ++S
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 61 LING 64
LING
Sbjct: 718 LING 721
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L E+MIQR + PD T N L+DGFC ++ EL M S+ + S+ I
Sbjct: 358 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 417
Query: 61 LING 64
LING
Sbjct: 418 LING 421
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++GV PD T N L++ +C + A EL+ SM KG K F+++ +ING
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 176
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M+++G TCN ++ G+C A +A E L +M KG D +++
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487
Query: 61 LING 64
LING
Sbjct: 488 LING 491
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M+ +G+ PD T N L++GF + DRA L+ M + G D ++++++NG S + R
Sbjct: 473 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 532
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L M G+ PD T N +++GF R A +++ M +G D +++
Sbjct: 498 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 557
Query: 61 LING 64
LING
Sbjct: 558 LING 561
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M+++G D T N +++G C A EL M +G D ++ +
Sbjct: 288 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 347
Query: 61 LINGGS 66
LING S
Sbjct: 348 LINGYS 353
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L M +RGV PD T L++G+ ++A L M + K D +++
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382
Query: 61 LING 64
LI+G
Sbjct: 383 LIDG 386
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A G+ + M++ G++PDT+T N L+ C D A + M S+G D S S LI
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M +G+ P T NA+++G C ++ RA+ +L M G D +++I
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207
Query: 61 LI 62
L+
Sbjct: 208 LL 209
>gi|255539453|ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549906|gb|EEF51393.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 475
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + MI RG P+ T N+++ G C+A +F+ AR +L MGS+GCK + ++
Sbjct: 380 LEKAREIFDEMIARGQLPNVFTYNSMIRGLCMAGKFEEARCMLKEMGSRGCKPNFLVYNT 439
Query: 61 LIN 63
L+N
Sbjct: 440 LVN 442
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D N + MI+ G PD ++ G+ +A ++ARE+ M ++G + F+++
Sbjct: 345 LDACNYFFDEMIKNGFVPDVVCYTVMITGYIVAGELEKAREIFDEMIARGQLPNVFTYNS 404
Query: 61 LING 64
+I G
Sbjct: 405 MIRG 408
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + +M+++G+ P+ T +LMDG+CL + ++A+++ +M +G + S++I
Sbjct: 329 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNI 388
Query: 61 LING 64
+ING
Sbjct: 389 MING 392
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M QRGV + + N +++GFC + D+A +L + M K D +++
Sbjct: 364 VNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNS 423
Query: 61 LING 64
LI+G
Sbjct: 424 LIDG 427
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + ++M+ + + P+ ST N L+DGFC + + + M +G K + ++
Sbjct: 294 LKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCS 353
Query: 61 LING 64
L++G
Sbjct: 354 LMDG 357
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L MI + PD T N L+DGFC R +A+ +L M + K + + +
Sbjct: 259 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNT 318
Query: 61 LING 64
L++G
Sbjct: 319 LVDG 322
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DE + E M + G PDT T NA++ GFC F+ A +L M +KGCK D S++++
Sbjct: 271 DEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVI 330
Query: 62 ING 64
I+G
Sbjct: 331 ISG 333
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A G+ E M+ +G PD + N ++ G C ++ A +L M +GC D S+ IL
Sbjct: 306 EAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRIL 365
Query: 62 ING 64
+G
Sbjct: 366 FDG 368
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
EAN L E M +RG PD + L DG C +F+ A +L M KG
Sbjct: 342 EANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKG 389
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN L + MI RG++P+ T N LMDG+C+ +R A +L M C D + +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 61 LING 64
LI G
Sbjct: 374 LIKG 377
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM++ +PD T +L+ G+C+ R D ++ ++ +G +A ++SI
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 61 LING 64
L+ G
Sbjct: 409 LVQG 412
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PD T N++++G C + A +LL M + K D F++S
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 61 LIN 63
+I+
Sbjct: 234 IID 236
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT+T N L+ G L + A L+ M GC+ D +++ ++NG
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+RG+ + T + L+ GFC + + A EL M S G D ++ IL++G
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN L + MI RG++P+ T N LMDG+C+ +R A +L M C D + +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 61 LING 64
LI G
Sbjct: 374 LIKG 377
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM++ +PD T +L+ G+C+ R D ++ ++ +G +A ++SI
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 61 LING 64
L+ G
Sbjct: 409 LVQG 412
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT+T N L++G CL + +A L+ M GC+ D +++ ++NG
Sbjct: 149 VMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNG 202
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PD T N++++G C + A ++L M + K D F++S
Sbjct: 174 VSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYST 233
Query: 61 LIN 63
+I+
Sbjct: 234 IID 236
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+RG+ + T + L+ GFC + + A EL M S G D ++ IL++G
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L +M ++G +P+ T A++DGF A + D+ EL+ MG+KGC + ++ +L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 62 IN 63
IN
Sbjct: 818 IN 819
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L ++M G P+ +AL+DGFC + D A+ + M +G + +++S
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 61 LIN 63
LI+
Sbjct: 712 LID 714
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++A + M+ +G PDTST + ++ C A + D A L M S D F+++I
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 61 LIN 63
LI+
Sbjct: 521 LID 523
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P+ T AL+DG C A + AR+LL M +GC+ + + LI+G
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ +MI G P N+L+ +C + + A +LL MG GC+ ++ILI G
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M++ P+ ++DG C + D A L+ M KGC + +++
Sbjct: 722 LDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTA 781
Query: 61 LING 64
+I+G
Sbjct: 782 MIDG 785
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
M AN L E+M+ G P+ T AL+DG C + + ++A ++ M
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ + E M + G PD T N L+DG C + D+A EL +M GC D S+S+
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367
Query: 61 LING 64
++NG
Sbjct: 368 VLNG 371
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E M ++GVNPD +T ++D C A + D A EL M +GC + +++ LI
Sbjct: 28 EALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALI 87
Query: 63 NG 64
NG
Sbjct: 88 NG 89
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ L MI+RG + +T NAL++G C + +RA +LL M SKG + D +++
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 61 LING 64
+++G
Sbjct: 121 ILSG 124
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L ++M + V PD TC LM G C R D A L M KG D H+I
Sbjct: 413 LDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNI 472
Query: 61 LING 64
++ G
Sbjct: 473 VLAG 476
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + MI+R + PD T N LMDG C A + D A++LL M D + + L+
Sbjct: 380 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLM 439
Query: 63 NG 64
+G
Sbjct: 440 HG 441
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M ++ +PD CNA++D C A + D A ++L M G D +++IL++G
Sbjct: 279 LYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 336
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + +I +G PDT T N+++ G D A E+ M GC + ++SI+
Sbjct: 204 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIV 263
Query: 62 ING 64
++G
Sbjct: 264 LSG 266
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M R V PD T N L+DGFC ++ D A +L + +KG D +++ ++ G
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 231
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E M +G PD T N ++ G C + A++ SM S+G D +++
Sbjct: 96 IERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 155
Query: 61 LING 64
L++
Sbjct: 156 LLDA 159
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M ++G PD T + ++ G C + A E++ M KG D +++I+++
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVD 53
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA E MI+R ++PD T N+++ G C+ + D A+++L M +KGC D +++ LI
Sbjct: 262 EAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLI 321
Query: 63 NG 64
NG
Sbjct: 322 NG 323
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LM+ +G PD T N L++GFC R D +L+ M +G D + +
Sbjct: 295 VDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNT 354
Query: 61 LING 64
+I G
Sbjct: 355 IIQG 358
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M QRG+ DT T N ++ G+ A R D A+E+ MGS + + ++SI
Sbjct: 330 VDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYSI 386
Query: 61 LING 64
L+ G
Sbjct: 387 LLYG 390
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++GFC +R A +L+ M CK D ++ +I+G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDG 183
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L +M ++G +P+ T A++DGF A + D+ EL+ MG+KGC + ++ +L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 62 IN 63
IN
Sbjct: 818 IN 819
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L ++M G P+ +AL+DGFC + D A+ + M +G + +++S
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 61 LIN 63
LI+
Sbjct: 712 LID 714
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++A + M+ +G PDTST + ++ C A + D A L M S D F+++I
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 61 LIN 63
LI+
Sbjct: 521 LID 523
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P+ T AL+DG C A + AR+LL M +GC+ + + LI+G
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ +MI G P N+L+ +C + + A +LL MG GC+ ++ILI G
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M++ P+ ++DG C + D A L+ M KGC + +++
Sbjct: 722 LDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTA 781
Query: 61 LING 64
+I+G
Sbjct: 782 MIDG 785
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
M AN L E+M+ G P+ T AL+DG C + + ++A ++ M
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+++G +P T ++DG A R + AR + V M GC+ DAF ++
Sbjct: 127 LDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 186
Query: 61 LING 64
LI+G
Sbjct: 187 LISG 190
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E ++ G PD T N +DG C A+R D A +LL M K C +++
Sbjct: 57 LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116
Query: 61 LING 64
L++G
Sbjct: 117 LVDG 120
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG T +ALMDGFC A EL M +GC+ + S++I+I G
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRG 473
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ++RG PD T +++DG C R + E M ++G + DA +++
Sbjct: 305 LDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 364
Query: 61 LING 64
LI+G
Sbjct: 365 LIDG 368
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+Q G T T N ++DG C A R A ++M +GC ++S L++G
Sbjct: 385 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 438
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLA-DRFDRARELLVSMGSKGCKQDAFSHSILING 64
E ++QR + PD T N+ + G C D EL SM S+G + S+SIL++G
Sbjct: 488 EKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDG 544
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI R + DT C AL++G C + DRA LL M C D + +++ING
Sbjct: 1 MIDRKL-VDTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVING 50
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M ++ P T T AL+DG A R D A +L M KG ++++
Sbjct: 92 VDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTV 151
Query: 61 LINGGS 66
+I+G S
Sbjct: 152 VIDGLS 157
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L +M ++G +P+ T A++DGF A + D+ EL+ MG+KGC + ++ +L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 62 IN 63
IN
Sbjct: 818 IN 819
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L ++M G P+ +AL+DGFC + D A+ + M +G + +++S
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 61 LIN 63
LI+
Sbjct: 712 LID 714
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++A + M+ +G PDTST + ++ C A + D A L M S D F+++I
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 61 LIN 63
LI+
Sbjct: 521 LID 523
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P+ T AL+DG C A + AR+LL M +GC+ + + LI+G
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ +MI G P N+L+ +C + + A +LL MG GC+ ++ILI G
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M++ P+ ++DG C + D A L+ M KGC + +++
Sbjct: 722 LDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTA 781
Query: 61 LING 64
+I+G
Sbjct: 782 MIDG 785
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
M AN L E+M+ G P+ T AL+DG C + + ++A ++ M
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + +M+++G+ PD T +LMDG+CL + ++A+ + +M G + S++I+I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343
Query: 63 NG 64
NG
Sbjct: 344 NG 345
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A GL MI +NPD T + L+DGFC R A+ +L M +G K D ++
Sbjct: 247 LNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCS 306
Query: 61 LING 64
L++G
Sbjct: 307 LMDG 310
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M+ +G++PD T +AL+ GFC+ + + A L M S+ D ++ SI
Sbjct: 212 VNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271
Query: 61 LING 64
L++G
Sbjct: 272 LVDG 275
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RGV D T N+++D C + D+A LL M +G + D ++++ILI+G
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E ++ +G N T ++ GFC D FD+A LL M GC +A ++ I
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516
Query: 61 LI 62
+I
Sbjct: 517 II 518
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M G+ PD T L+DG C R A+ + + KG +++++
Sbjct: 422 VDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTV 481
Query: 61 LING 64
+I G
Sbjct: 482 MIQG 485
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + PD T N+L+DG C + + A +L+ M +G D +++
Sbjct: 352 VDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411
Query: 61 LING 64
+++
Sbjct: 412 ILDA 415
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M Q GV + + N +++GFC + D A L M K D +++
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNS 376
Query: 61 LING 64
LI+G
Sbjct: 377 LIDG 380
>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Brachypodium distachyon]
Length = 721
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + MI + +PD T +A++DGFC D+AR+++ M GCK + +H+
Sbjct: 353 MAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTA 412
Query: 61 LING 64
L+NG
Sbjct: 413 LLNG 416
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G A+ M + GV PD T N L+ G C R A E++ M GC D S+
Sbjct: 212 VDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYT 271
Query: 61 LIN 63
+++
Sbjct: 272 VMS 274
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L +M ++G NP+ T A++DGF + R ++ ELL M SKGC + ++ +L
Sbjct: 501 DEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVL 560
Query: 62 IN 63
IN
Sbjct: 561 IN 562
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M++ P+ ++DG C + D A +L+V M KGC + +++
Sbjct: 465 LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTA 524
Query: 61 LIN--GGSARIRK 71
+I+ G S R+ K
Sbjct: 525 MIDGFGKSGRVEK 537
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DG C A + AR+LL SM +GC+ + + LI+G
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDG 423
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M G P+ +AL+DG C A + D A+E+ +M G + +++S LI
Sbjct: 397 EARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLI 456
Query: 63 N 63
+
Sbjct: 457 D 457
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK-QDAFSHS 59
+ +AN + E+M+ +G P+ T AL+DG C A + ++A ++ M + + D H
Sbjct: 308 VSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF 367
Query: 60 ILINGGS 66
+++G S
Sbjct: 368 RVVDGAS 374
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M + G+ PD L+D FC A ++AR M GC + +++
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297
Query: 61 LING 64
LI+
Sbjct: 298 LIHA 301
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L + M + ++PD T N LM G C +F+ AREL+ M +G K D S++
Sbjct: 484 MDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 543
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 544 LISGYSKK 551
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L E ++ +G+ PD N LMDG C DRA LL M D +++ L+
Sbjct: 451 EADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLM 510
Query: 63 NG 64
G
Sbjct: 511 RG 512
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G+ P T N L+ G + ++ + A L+ + KG D+ +++I+ING
Sbjct: 354 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVING 407
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E MI+R ++P+ T ++L++GFC+ DR A+++L M K C + +++ LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 63 NG 64
NG
Sbjct: 401 NG 402
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + ELMI++ P+ T N L++GFC A R D+ EL M +G + +++
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 61 LING 64
LI+G
Sbjct: 434 LIHG 437
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T N+L++GFC +R A L+ M G K D + + LI+G
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ D ++
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 61 LINGGSAR 68
++NG R
Sbjct: 224 VVNGLCKR 231
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + +A +L M + + F++S LI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 63 NG 64
NG
Sbjct: 366 NG 367
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV+P+ T N L+DG C + +A + + + D ++++I+
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 62 ING 64
I G
Sbjct: 505 IEG 507
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG PD T A+++G C D A LL M + + + +S +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 63 N 63
+
Sbjct: 261 D 261
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L +M ++G P+ T A++DGF A R DR ELL M SKGC + ++ +L
Sbjct: 401 DEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVL 460
Query: 62 IN 63
IN
Sbjct: 461 IN 462
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M G P+ +AL+DGFC + D A+E+ M GC + +++S LI
Sbjct: 297 EARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356
Query: 63 N 63
+
Sbjct: 357 D 357
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DG C A + AR+LL +M +GC+ + + LI+G
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDG 323
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M + G+ PD T L+D FC ++AR M GC + +++
Sbjct: 138 VEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTA 197
Query: 61 LING 64
LI+
Sbjct: 198 LIHA 201
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ P+ ++DG C + D A L++ M KGC + +++ +I+G
Sbjct: 375 MLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDG 428
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M +RG P T N+++ GFC A R D A + M ++GC D +++
Sbjct: 125 LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTA 184
Query: 61 LING 64
LI G
Sbjct: 185 LIGG 188
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ RG+ + T +AL+DG C +R D A L+ +M +GC +++
Sbjct: 90 VDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNS 149
Query: 61 LING 64
+I G
Sbjct: 150 IITG 153
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+G E M+ G +PD T AL+ GFC + R ELL + +G D ++S
Sbjct: 160 VDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219
Query: 61 LING 64
+I+G
Sbjct: 220 VIDG 223
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D L E++ R V PD +T ++ CL DR D AREL+ M +G +A ++S L
Sbjct: 57 DAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 115
Query: 62 ING 64
++G
Sbjct: 116 VDG 118
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L E + +RG P T N ++DG+C A++ +A EL+ S+G + +++I
Sbjct: 332 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNI 391
Query: 61 LING 64
L+ G
Sbjct: 392 LVAG 395
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M+ ++PD T +L+DG C R + A ELL + +GC ++++
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 356
Query: 61 LING 64
+++G
Sbjct: 357 VVDG 360
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ PD T LM FC R D A EL M + D + +
Sbjct: 262 MDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 321
Query: 61 LING 64
L++G
Sbjct: 322 LVDG 325
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E++ + + PD T N L++GFC + DRAR +L M S GC + F++S+L+NG
Sbjct: 251 EMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNG 306
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M G +P+ + LM+G+C R A+E+ + S G K D S++
Sbjct: 278 VDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTT 337
Query: 61 LIN 63
LIN
Sbjct: 338 LIN 340
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ PDT + L++ C R D A ELL M K C+ D + ++++ G
Sbjct: 327 GMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGG 376
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + DT T N ++ G C RFD A +++ + +G + S+ I
Sbjct: 348 VDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRI 407
Query: 61 LIN 63
++N
Sbjct: 408 VLN 410
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ +AE M+ G+ PD ++ N +++ FC RFD A L+ + +G K D ++H+I
Sbjct: 269 IEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTI 328
Query: 61 LING 64
+I+G
Sbjct: 329 IIHG 332
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGG 65
I+ G+NPD T N L+DG+C D A +L M G D S++ L +G
Sbjct: 34 IKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGA 87
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+++G +P T ++DG A R + AR + V M GC+ DAF ++
Sbjct: 93 LDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 152
Query: 61 LING 64
LI G
Sbjct: 153 LIKG 156
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E ++ G PD T N +DG C A+R D A +LL M K C +++
Sbjct: 23 LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 82
Query: 61 LING 64
L++G
Sbjct: 83 LVDG 86
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG T +ALMDGFC A EL M +GC+ + S++I+I G
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRG 371
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+Q G T T N ++DG C A R A ++M +GC ++S L++G
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 336
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++RG PD T +++DG C R + E M ++G + DA +++ LI+G
Sbjct: 214 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 266
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLA-DRFDRARELLVSMGSKGCKQDAFSHSILING 64
E ++QR + PD T NA + G C D EL SM S+G + S+SIL++G
Sbjct: 386 EKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDG 442
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L E M+ +G +P+ + + LMDG C A + A E+ M S+G D + LI
Sbjct: 420 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLI 475
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
M+ RGV PD N L+ C+A R D A E+ + + DA+S+ L++G S
Sbjct: 459 MVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDGLS 513
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M ++ P T T AL+DG A R D A +L M KG ++++
Sbjct: 58 VDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTV 117
Query: 61 LINGGS 66
+I+G S
Sbjct: 118 VIDGLS 123
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + +M+++GV PD T ++LMDG+CL + ++A+ + +M G A S++I+IN
Sbjct: 288 AKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMIN 347
Query: 64 G 64
G
Sbjct: 348 G 348
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +G+ PDT T N+L+DG C R A +L+ M + G D +++
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414
Query: 61 LIN 63
LI+
Sbjct: 415 LID 417
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M+ + +NPD T + L+D C RA+ +L M +G D ++S
Sbjct: 250 LKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSS 309
Query: 61 LING 64
L++G
Sbjct: 310 LMDG 313
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + +G+ P T N L+DG C R A+++ + KG +A++++I
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNI 484
Query: 61 LING 64
+ING
Sbjct: 485 MING 488
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L MI + ++PD T N+L+ GFC+ + A L M K D ++ SI
Sbjct: 215 VSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSI 274
Query: 61 LING 64
L++
Sbjct: 275 LVDA 278
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M G+ D T N+L+D C D+A L+ + +G + ++++ILI+G
Sbjct: 396 LVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + +M+++ + PD T ++LMDG+CL + ++A + +M +G + S++I
Sbjct: 419 IKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNI 478
Query: 61 LING 64
+ING
Sbjct: 479 MING 482
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + + + PD T NAL+ GFC+ + A +L M SK D ++ SI
Sbjct: 349 VNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSI 408
Query: 61 LING 64
L++G
Sbjct: 409 LVDG 412
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG PD T N+++D C D+A LL + +G + D +++IL+ G
Sbjct: 530 LVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG 587
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G N D ++ GFC FD A LL M GC DA ++ I
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653
Query: 61 LI 62
+I
Sbjct: 654 II 655
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +G+ PD +T L+ G C + + + AR++ + KG D +++++
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618
Query: 61 LING 64
+I G
Sbjct: 619 MIQG 622
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M RGV + + N +++GFC D A +L M K D ++S
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513
Query: 61 LING--GSARI 69
LI+G S RI
Sbjct: 514 LIDGLCKSGRI 524
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + PD T ++L+DG C + R A EL+ M +G + D +++
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548
Query: 61 LING 64
+++
Sbjct: 549 ILDA 552
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M + + PD T + L+DGFC A+ +L M + K D ++S
Sbjct: 384 LKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSS 443
Query: 61 LING 64
L++G
Sbjct: 444 LMDG 447
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E MI+ G PD T + L++G C A R D EL M +GCK D ++++
Sbjct: 735 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNA 794
Query: 61 LING 64
+IN
Sbjct: 795 MINA 798
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M++ G +P T L G C + RFD A E+L M ++GC +A ++S
Sbjct: 629 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 688
Query: 61 LING 64
+++G
Sbjct: 689 IVDG 692
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A GL E MI+ G++PD T N+++DG C R A + +GC+ + ++S LI
Sbjct: 491 DALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 550
Query: 63 NGGS 66
+G S
Sbjct: 551 DGLS 554
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ N+LM+G C A R D A EL M GC D +++IL+ G
Sbjct: 308 PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQ-RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA G E M + V P +AL+DG C A R D A E L M G D + S
Sbjct: 699 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS 758
Query: 60 ILING 64
ILING
Sbjct: 759 ILING 763
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
IQ G P T + ++DG C + D+ +LL M +GC +A +++ L+N
Sbjct: 28 IQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNA 80
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M++ G +T T + ++DG R + A +L M GC DA +++
Sbjct: 559 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 618
Query: 61 LINGGSARIR 70
LI+G R R
Sbjct: 619 LIDGFFKRQR 628
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ + + ++RG P+ T + L+DG + D A +LL M GC+ + ++S ++
Sbjct: 526 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 585
Query: 63 NG 64
+G
Sbjct: 586 DG 587
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--GSAR 68
M +RG D NA+++ +CL F A LL M + G ++ +H I+I G+ R
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839
Query: 69 I 69
I
Sbjct: 840 I 840
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q GV+P+T T +AL+DG C A + D A LL K + F+ S L++G
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHG 287
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRA-RELLVSMGSKGCKQDAFSHS 59
+DEA L ++M + G + D T N L+ G C R A R + + ++GC + + S
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385
Query: 60 ILING 64
LI G
Sbjct: 386 TLIQG 390
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMG 47
E M+++ + PD ++L+D FC AD+ D A +LL S G
Sbjct: 951 EEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSG 989
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G+ M+ RG PDT+T N L+ C +R + A +L + KG D ++ +I
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410
Query: 61 LING 64
LIN
Sbjct: 411 LINA 414
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA + +G++PD T N L++ C L M S GC D +++I
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNI 445
Query: 61 LIN 63
LI+
Sbjct: 446 LID 448
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M G PD T N L+D C + A +LL M S GC + +++ +I+
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486
Query: 67 ARIR 70
++R
Sbjct: 487 KQMR 490
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M G++ T N L+DG C A R D A EL+ M +G + +++
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550
Query: 61 LIN 63
++
Sbjct: 551 ILT 553
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M + G PD T A++D FC R D AREL M +GC D +++I
Sbjct: 309 LDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNI 368
Query: 61 LING 64
LI G
Sbjct: 369 LIRG 372
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVN-PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
++EA + E M++ G P T +A++DG C ADR D A +L M GC D +++
Sbjct: 273 VEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYT 332
Query: 60 ILING 64
+I+
Sbjct: 333 AIIDA 337
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+DEA L + M +RG D N L+ G+C A + D A ++ M +G
Sbjct: 344 LDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 393
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++ + + E M+ +G +P+ T +++G+C A R D+A L+ + G +S L
Sbjct: 101 EQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTL 160
Query: 62 ING 64
I+G
Sbjct: 161 IDG 163
>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 458
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA GL + MI +NP+ T N L+D FC + + A+ +L +M K K D ++S
Sbjct: 223 LEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSS 282
Query: 61 LING 64
L+NG
Sbjct: 283 LMNG 286
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M+++ + D ++LM+G+CL + +A+ + +M + D S++I
Sbjct: 258 IEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNI 317
Query: 61 LIN 63
+IN
Sbjct: 318 MIN 320
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ G++P+ T AL+DGFC+ + + A L M S+ + ++ +
Sbjct: 188 VNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNG 247
Query: 61 LING 64
L++
Sbjct: 248 LVDA 251
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+DEA L E M + + PD T + L+DG C + R A EL+ M +G
Sbjct: 328 VDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRG 377
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA ++ +G+ PD T N+L+ G CL+ A EL M +KGC D F++++
Sbjct: 387 VEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNM 446
Query: 61 LIN 63
LI+
Sbjct: 447 LID 449
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L + MI G+ PD T N+L+ FC A +A +++ +M S GC+ D ++
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGT 586
Query: 61 LING 64
LI G
Sbjct: 587 LIAG 590
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M +G +PD T N L+D C + A LL M GC ++ +++ LI+G
Sbjct: 428 LYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDG 485
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M +GV+ ++ T N L+DG C ++R + A +L+ M +G + D F+++ L+
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + MI+R +P+T T N ++ C ++ + A +L + + KG D +++
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNS 411
Query: 61 LING 64
LI G
Sbjct: 412 LIQG 415
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
++M++ G +PD T N+L+ G C D A ++L M + C + +++ +I+
Sbjct: 325 DMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIS 379
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M G + T N L+DGFC R A E+ M +G +++ +++
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516
Query: 61 LING 64
LI+G
Sbjct: 517 LIDG 520
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M GV PD TCNAL++GFC+ DR D A LL G D +S
Sbjct: 247 VDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSC 306
Query: 61 LING 64
LI G
Sbjct: 307 LIRG 310
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + GV PDT N L+ GFC AR L + + C + ++SILI+G
Sbjct: 362 MTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISG 415
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M QRG+ PD T ++ G C + R D A L M G D + + L+NG
Sbjct: 218 LFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNG 275
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G P T N L++GFC F+ A +L M KG D ++ LING
Sbjct: 519 GDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLING 568
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + ++ GV P T +L+ G C+A+ FD AREL M +GC ++++
Sbjct: 339 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 398
Query: 61 LINGGSAR 68
+I+ R
Sbjct: 399 MIDASCKR 406
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M++R P T N L+ G C A R ARE+L +M S G D +++
Sbjct: 523 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 582
Query: 61 LING 64
L++G
Sbjct: 583 LVHG 586
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M+ G +PD T N L+ G C A + +RARELL M ++G + +++
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 617
Query: 61 LING 64
L++G
Sbjct: 618 LVSG 621
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + MI+ G PD T N +MDG C + R + A L M GC + SH+
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468
Query: 61 LING 64
+I G
Sbjct: 469 IILG 472
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A L M+ RG+ P+ T AL+ G C A+R A + M S GC + F+++ L
Sbjct: 594 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 653
Query: 62 ING 64
I G
Sbjct: 654 ILG 656
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G PD T + L+ G C R D AR LL M + CK + +
Sbjct: 488 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 547
Query: 61 LING 64
LI+G
Sbjct: 548 LIHG 551
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P T N L++GFC + D+ARELL +M + C D S+ +++G
Sbjct: 209 EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDG 256
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L +M++ GV PD T NALMDG+ L +A+ + M G D S+S+
Sbjct: 275 MREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSV 334
Query: 61 LINGGS 66
+I+G S
Sbjct: 335 MISGLS 340
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A GL M+ + VNP+ T N L+DG C + A+ L+ M +G D F+++
Sbjct: 240 LDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNA 299
Query: 61 LING 64
L++G
Sbjct: 300 LMDG 303
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + ++ +G N D T + +++G C FD A LL M KGC DA ++
Sbjct: 450 LTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYET 509
Query: 61 LING 64
+IN
Sbjct: 510 IINA 513
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + +G+ + T N L+DG C R A+++ + KG D ++SI
Sbjct: 415 VDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSI 474
Query: 61 LING 64
+ING
Sbjct: 475 MING 478
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG P+ T +L+D C + + D+A LL + +G + + ++++IL++G
Sbjct: 390 MHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDG 443
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M V PD ++L+DG C + R + A + + M +G + +++
Sbjct: 345 LDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTS 404
Query: 61 LING 64
LI+
Sbjct: 405 LIDA 408
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + + M Q V PD T N LM G C + + AREL+ M S+G K D S++
Sbjct: 452 MDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNT 511
Query: 61 LINGGSAR 68
LI+G S R
Sbjct: 512 LISGYSKR 519
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA+G+ + M ++G+ PD+ T N L++G+C +A L M SKG + +++
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406
Query: 61 LINGGSARIR 70
LI S R R
Sbjct: 407 LIYVLSKRGR 416
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G+ P ST N L+ L + D A ++ M KG D+ +++ILING
Sbjct: 322 MVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILING 375
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + + M+ G NP T NAL+ G C + D A +LL M SKG + ++
Sbjct: 522 MKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLS 581
Query: 61 LING 64
LI G
Sbjct: 582 LIEG 585
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A LM G+ P+ T N ++ G+C R + AR + M +G K D++++
Sbjct: 207 LKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGS 266
Query: 61 LING 64
I+G
Sbjct: 267 FISG 270
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + +LM RGV PD+ T + + G C + + A +L M G + A +++
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 61 LING 64
LI+G
Sbjct: 302 LIDG 305
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M + G PD T A++D FC R D AREL M +GC D +++I
Sbjct: 382 LDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNI 441
Query: 61 LING 64
LI G
Sbjct: 442 LIRG 445
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVN-PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
++EA + E M++ G P T +A++DG C ADR D A +L M GC D +++
Sbjct: 346 VEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYT 405
Query: 60 ILING 64
+I+
Sbjct: 406 AIIDA 410
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +RG D N L+ G+C A + D A ++ M +G + + S S
Sbjct: 417 LDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLST 476
Query: 61 LING 64
+++G
Sbjct: 477 IVDG 480
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+DEA + E M RG+ P+ + + ++DG C R + AR L+ M
Sbjct: 452 VDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + G +P S + L+DG C DR D AREL + G QD ++
Sbjct: 208 IDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM--AAGDVQDVIVYTS 265
Query: 61 LING 64
I+G
Sbjct: 266 FISG 269
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++ + + E M+ +G +P+ T +++G+C A R D+A L+ + G +S L
Sbjct: 174 EQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTL 233
Query: 62 ING 64
I+G
Sbjct: 234 IDG 236
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +LM++ GV PD + N L+DG CL R D A +LL + S G K D +++ L+
Sbjct: 465 EAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLL 524
Query: 63 NG 64
+G
Sbjct: 525 HG 526
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ +G+ PD T N ++ G RF A+EL +SM + + + ++++I
Sbjct: 533 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 592
Query: 61 LING 64
+ING
Sbjct: 593 IING 596
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L ++++ G+ PD T N L+ G+C A R D A L M KG D +++
Sbjct: 498 IDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNT 557
Query: 61 LING 64
+++G
Sbjct: 558 ILHG 561
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 19 DTSTCNALMDGFCLADRFDRARELLVS-MGSKGCKQDAFSHSILING 64
DT + L+ G C A R D A ++L+ M GC D FS+SIL+ G
Sbjct: 127 DTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKG 173
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD-AFSHSILIN 63
MI G+ PD ++L+ G C D++++A EL + +G + D F ++++ N
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCN 456
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + ++RG PD T NAL++GFC AD+ D A+ +L M S+ D +++
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 61 LING 64
L+NG
Sbjct: 121 LVNG 124
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + MI++G PD T +AL+DG A + D AR LL +M +KGC + ++++
Sbjct: 342 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 401
Query: 61 LING 64
LI+G
Sbjct: 402 LISG 405
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L +++ G+ PD T +DG C A R + A +L M KGC D SH+
Sbjct: 199 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 258
Query: 61 LING 64
+ING
Sbjct: 259 VING 262
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L E MI+ G +PD T N L+ GFC D A ++ +G D +++
Sbjct: 26 MSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNA 85
Query: 61 LING 64
LING
Sbjct: 86 LING 89
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +G P+ T N+L+ G C ++ D A EL V+M KGC D ++
Sbjct: 377 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGT 436
Query: 61 LING 64
+I+
Sbjct: 437 IISA 440
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G PD + NA+++G C R D A LL M +KGC +A S + LI G
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M+ + PD T N+L++G C R D AR L+V KG + ++S
Sbjct: 96 LDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYST 152
Query: 61 LINGGSARIR 70
LI+G +R
Sbjct: 153 LISGLCRELR 162
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L ++++G P+ T N L+DG DR + A EL + G + DA ++++
Sbjct: 164 VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 223
Query: 61 LING 64
I+G
Sbjct: 224 FIDG 227
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARE---LLVSMGSKGCKQDAFSHSILING 64
M++RGV P T N L+DG C A + R +E L +M KG D ++S LI+G
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 370
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +G +P+ + N L+ G C A ++ +A M +G K +++I
Sbjct: 269 VDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNI 328
Query: 61 LING 64
L++G
Sbjct: 329 LVDG 332
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E+MI++G P+ T L+ G C A+R A++LL M + GC + ++S
Sbjct: 200 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST 259
Query: 61 LING 64
+ING
Sbjct: 260 VING 263
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L +LM +R P+ T N L+DG C A R + AR+L M GC D +++
Sbjct: 270 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 329
Query: 61 LING 64
LI+G
Sbjct: 330 LIDG 333
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M + G PD TCN L+ G+C + R D AR+LL M G + + +H +
Sbjct: 589 VDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDL 648
Query: 61 L 61
L
Sbjct: 649 L 649
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++I +G P N +++GFC A D A +LL M KGC + F+ +ILI G
Sbjct: 174 VVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITG 228
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ G +P+ T + +++G C + D A EL M + C + +H+ILI
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 296
Query: 63 NG 64
+G
Sbjct: 297 DG 298
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + E M+ G P+ ST N ++ C A + D A EL+ M GC D + + L
Sbjct: 555 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTL 614
Query: 62 ING 64
I G
Sbjct: 615 IGG 617
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD T AL+ C A +FD A+ +L M ++GC D + S LI+G
Sbjct: 76 PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK-QDAFSHS 59
++EA L M + G PD T N+L+DG C + + D A +L ++ G +A ++S
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364
Query: 60 ILINGGSA 67
L +G +A
Sbjct: 365 TLFHGYAA 372
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G P +T +A++ G + +RA +L SM ++GC DA +++++ G
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 474
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFC 31
DEA G+ MI RG PDT T + L+DG C
Sbjct: 94 FDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA G+ ++M++ G P T NAL++ FC D+ D A ELL +M CK + ++SI+
Sbjct: 205 EEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNFVTYSIM 264
Query: 62 IN 63
+
Sbjct: 265 VQ 266
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A+ +M + G +T+T N+L++GFC R D A +L M ++G D+ ++S+
Sbjct: 309 MDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSV 368
Query: 61 LING 64
LI G
Sbjct: 369 LIQG 372
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA E ++ G P+ CNA + G C D A L M +GC+ + +++
Sbjct: 274 MVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNS 333
Query: 61 LING 64
L+ G
Sbjct: 334 LVEG 337
>gi|302809675|ref|XP_002986530.1| hypothetical protein SELMODRAFT_124408 [Selaginella moellendorffii]
gi|300145713|gb|EFJ12387.1| hypothetical protein SELMODRAFT_124408 [Selaginella moellendorffii]
Length = 247
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA G+ ++M++ G P T NAL++ FC D+ D A ELL +M CK + ++SI+
Sbjct: 81 EEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNFVTYSIM 140
Query: 62 IN 63
+
Sbjct: 141 VQ 142
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +M Q+G D TCN + GFC ++R + A+ LL++M +G + S SI
Sbjct: 379 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 438
Query: 61 LIN 63
LI+
Sbjct: 439 LID 441
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L M +RG+ PDT T +L+DG + DRA EL M G ++ ++++
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543
Query: 61 LINGGS 66
+I+G S
Sbjct: 544 IISGLS 549
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + M +GV+ + N LMDG+C D A L M KG + DAF+ +I
Sbjct: 344 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 403
Query: 61 LING 64
+ +G
Sbjct: 404 IASG 407
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DE + E M + G PDT T NA++ GFC F+ A +L M KGCK D S++++
Sbjct: 271 DEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVI 330
Query: 62 ING 64
I+G
Sbjct: 331 ISG 333
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A G+ E M+ +G PD + N ++ G C ++ A +L M +GC D S+ IL
Sbjct: 306 EAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRIL 365
Query: 62 ING 64
+G
Sbjct: 366 FDG 368
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
EAN L E M +RG PD + L DG C +F+ A +L M KG
Sbjct: 342 EANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKG 389
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL M+++G +P+ T NAL+DGF +R D LL M +GC+ D ++++++
Sbjct: 117 EAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMIL 176
Query: 63 N 63
+
Sbjct: 177 D 177
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E MIQ G P+ ++ C R D A ++L+SM S+GCK D S+ IL+
Sbjct: 220 EALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILV 279
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L MIQ P+ T N+++ FC R + AR + M GC D S++ L
Sbjct: 359 DTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 26 LMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LM GFC A F +A ELL M S G + + H+ +I G
Sbjct: 36 LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRG 74
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L + M QRG P T N L+ FC A + D A +LL M K + +++
Sbjct: 323 LHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNS 382
Query: 61 LI 62
+I
Sbjct: 383 II 384
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +M Q+G D TCN + GFC ++R + A+ LL++M +G + S SI
Sbjct: 383 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 442
Query: 61 LIN 63
LI+
Sbjct: 443 LID 445
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L M +RG+ PDT T +L+DG + DRA EL M G ++ ++++
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547
Query: 61 LINGGS 66
+I+G S
Sbjct: 548 IISGLS 553
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + M +GV+ + N LMDG+C D A L M KG + DAF+ +I
Sbjct: 348 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 407
Query: 61 LING 64
+ +G
Sbjct: 408 IASG 411
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + ++RG PD T NAL++GFC AD+ D A+ +L M S+ D +++
Sbjct: 136 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195
Query: 61 LING 64
L+NG
Sbjct: 196 LVNG 199
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + MI++G PD T +AL+DG A + D AR LL +M +KGC + ++++
Sbjct: 452 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 511
Query: 61 LING 64
LI+G
Sbjct: 512 LISG 515
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L +++ G+ PD T +DG C A R + A +L M KGC D SH+
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 368
Query: 61 LING 64
+ING
Sbjct: 369 VING 372
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +G P+ T N+L+ G C D+ D A EL V+M KGC D ++
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546
Query: 61 LING 64
+I+
Sbjct: 547 IISA 550
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L E MI+ G +PD T N L+ GFC + D A ++ +G D +++
Sbjct: 101 MSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNA 160
Query: 61 LING 64
LING
Sbjct: 161 LING 164
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G PD + NA+++G C R D A LL M +KGC +A S + LI G
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M+ + PD T N+L++G C R D AR L+V KG + ++S
Sbjct: 171 LDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYST 227
Query: 61 LINGGSARIRK 71
LI+G +R+
Sbjct: 228 LISGLCRELRR 238
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLA-DRFDRARELLVSMGSKGCKQDAFSHSILING 64
L++ +G +P+ T + L+ G C R + AR+LL M GCK D S++ LI+G
Sbjct: 212 LIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHG 267
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L ++++G P+ T N L+DG DR + A EL + G + DA ++++
Sbjct: 274 VSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333
Query: 61 LING 64
I+G
Sbjct: 334 FIDG 337
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARE---LLVSMGSKGCKQDAFSHSILING 64
M++RGV P T N L+DG C A + R +E L +M KG D ++S LI+G
Sbjct: 424 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 480
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +G +P+ + N L+ G C A ++ +A M +G K +++I
Sbjct: 379 VDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNI 438
Query: 61 LING 64
L++G
Sbjct: 439 LVDG 442
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 5 NGLAELMIQ-RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHSILI 62
+G A L++Q PDT T NA++ GFC + DRA L M + GC D F++SILI
Sbjct: 140 SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILI 199
Query: 63 NG--GSARIRK 71
NG S+ +RK
Sbjct: 200 NGLCKSSNLRK 210
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M++ G PD T + ++DG C D+ LL M S+GCK D ++++
Sbjct: 244 LDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTV 303
Query: 61 LING 64
L+ G
Sbjct: 304 LVTG 307
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L+DG+C A DRARELL SM GC D ++S +I+G
Sbjct: 232 NTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDG 272
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L E M+ RG PD T L+ G C A + A L+ M GC +A ++S+
Sbjct: 279 VDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSL 338
Query: 61 LING 64
+ +G
Sbjct: 339 VFDG 342
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L + M++ G P+ T + + DG C D+ D A +LL S+ KG D +
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFET 373
Query: 61 LINGGSARI 69
L+ R+
Sbjct: 374 LLLSVKKRL 382
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M PD T N L+ G C A R D A+++L M G + +++
Sbjct: 70 VPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNT 129
Query: 61 LINGGSA 67
LING S+
Sbjct: 130 LINGLSS 136
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 5 NGLAELMIQ-RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHSILI 62
+G A L++Q PDT T NA++ GFC + DRA L M + GC D F++SILI
Sbjct: 140 SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILI 199
Query: 63 NG--GSARIRK 71
NG S+ +RK
Sbjct: 200 NGLCKSSNLRK 210
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M++ G PD T + ++DG C D+ LL M S+GCK D ++++
Sbjct: 244 LDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTV 303
Query: 61 LING 64
L+ G
Sbjct: 304 LVTG 307
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L+DG+C A DRARELL SM GC D ++S +I+G
Sbjct: 232 NTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDG 272
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L E M+ RG PD T L+ G C A + A L+ M GC +A ++S+
Sbjct: 279 VDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSL 338
Query: 61 LING 64
+ +G
Sbjct: 339 VFDG 342
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L + M++ G P+ T + + DG C D+ D A +LL S+ KG D +
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEA 373
Query: 61 LINGGSARI 69
L+ R+
Sbjct: 374 LLLSVKKRL 382
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M PD T N L+ G C A R D A+++L M G + +++
Sbjct: 70 VPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNT 129
Query: 61 LINGGSA 67
LING S+
Sbjct: 130 LINGLSS 136
>gi|302763057|ref|XP_002964950.1| hypothetical protein SELMODRAFT_406577 [Selaginella moellendorffii]
gi|300167183|gb|EFJ33788.1| hypothetical protein SELMODRAFT_406577 [Selaginella moellendorffii]
Length = 464
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA G+ ++M++ G P T NAL++ FC D+ D A ELL +M CK + ++SI+
Sbjct: 279 EEALGMTDVMVEMGFCPTIVTFNALLELFCNTDQMDSATELLETMARSKCKPNFVTYSIM 338
Query: 62 IN 63
+
Sbjct: 339 VQ 340
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A+ +M + G +T+T N+L++GFC R D A +L M ++G D+ ++++
Sbjct: 383 MDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYNV 442
Query: 61 LING 64
LI G
Sbjct: 443 LIQG 446
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA E ++ G P+ CNA + G C D A L M +GC+ + +++
Sbjct: 348 MVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNS 407
Query: 61 LING 64
L+ G
Sbjct: 408 LVEG 411
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRA 39
MDEA + E MI G PD++T N L+ G C A + + A
Sbjct: 418 MDEAERVLEEMIAEGSLPDSTTYNVLIQGLCSAGQIEHA 456
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + PD T ALMDG C DR A+++L +M + C + ++S
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376
Query: 61 LING 64
LI+G
Sbjct: 377 LIDG 380
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ +PD T +L+DGFC R AR +L M +GC+ + +++
Sbjct: 527 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 586
Query: 61 LING 64
LI+
Sbjct: 587 LIDA 590
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + MI RG+ P+ T N+L+ GFC+ + D A L+ M + GC D +++ LI
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448
Query: 63 NG 64
+G
Sbjct: 449 DG 450
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M+++ V PD T + L++G+C A D A LL M + C D ++++
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551
Query: 61 LING 64
L++G
Sbjct: 552 LVDG 555
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M G PD T N L+DG C R A L M +K C D ++S
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481
Query: 61 LING 64
LI G
Sbjct: 482 LIGG 485
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M++ G P+ T N L+ G C D A ELL M +G + D FS+
Sbjct: 212 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 271
Query: 61 LING 64
L+ G
Sbjct: 272 LMAG 275
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L + M +RG+ PD + + LM G C + D A ++ + C D ++S
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306
Query: 61 LING 64
LI G
Sbjct: 307 LIAG 310
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMG-SKGCKQDAFSHSILING 64
L E M+ GV P+ T +L+ GFC + AR++L + + CK D F++ ++++G
Sbjct: 603 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDG 661
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L M + NPD T + L+ GFC +R D AR L M + D + S L+
Sbjct: 459 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518
Query: 63 NG 64
G
Sbjct: 519 EG 520
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M +RG P+ T AL+D FC A + A LL M G + + ++
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRS 621
Query: 61 LING 64
LI G
Sbjct: 622 LIGG 625
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA M ++G P+ T N L++GFC + RA LL M G + ++S
Sbjct: 142 LPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYST 201
Query: 61 LING 64
+I+G
Sbjct: 202 VIHG 205
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M R P+ T ++L+DG C + A+E+ M +G + + +++
Sbjct: 352 LQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 411
Query: 61 LING 64
LI+G
Sbjct: 412 LIHG 415
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L ++MI++G+ P TCN ++ G+C + +A E L M +KG D S++
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 356
Query: 61 LINGGSAR 68
LIN G R
Sbjct: 357 LINDGKRR 364
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L M QR + PD N L+DGFC ++A EL M S+ + ++ I
Sbjct: 227 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 286
Query: 61 LING 64
LIN
Sbjct: 287 LINA 290
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M +G+ P T NA+++G C R+ RA+ +L+ M + G D +++
Sbjct: 17 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 76
Query: 61 LI 62
L+
Sbjct: 77 LL 78
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A G+ M+ G++PDT+T N L+ C D F A+E+ M +G D S S L+
Sbjct: 55 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLM 113
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ L + M++RG PD T L+ G C +A L +M + K D +++
Sbjct: 192 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 251
Query: 61 LING 64
LI+G
Sbjct: 252 LIDG 255
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELM RG P+ +CN L++G C A R +ARE+ + + K D ++S
Sbjct: 292 VDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYST 351
Query: 61 LING 64
++G
Sbjct: 352 FMDG 355
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E +++R PD T + MDG C A R D+AR++L + KG D ++
Sbjct: 327 LSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTA 386
Query: 61 LING 64
LI+G
Sbjct: 387 LISG 390
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAEL-MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA + E+ M G P+ TCN L++GF LA R D AREL +G + D + S
Sbjct: 397 LDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFS 456
Query: 60 ILIN 63
+ N
Sbjct: 457 AMAN 460
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELL-VSMGSKGCKQDAFSHS 59
+D+A + +++ +G PD AL+ G C R D AR++ V M + GC + F+ +
Sbjct: 362 VDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCN 421
Query: 60 ILING 64
+L+NG
Sbjct: 422 VLVNG 426
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ G +P C+ LMDGFC D A + M ++GC + S +ILING
Sbjct: 268 LESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILING 320
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M G P TST N L+ G C +R A++ + S G +++I
Sbjct: 117 IDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNI 176
Query: 61 LING 64
L++G
Sbjct: 177 LVDG 180
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+ EA E ++ G T N L+DGFC ADR A ELL + ++G
Sbjct: 152 LGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARG 201
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 8 AELMIQR----GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
AEL R GV P T L+DG C A+R RA+E+ S G S L++
Sbjct: 225 AELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMD 284
Query: 64 G 64
G
Sbjct: 285 G 285
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + +M+++G+ PD T N+LMD +CL ++A+ + ++ +G + S+SI
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357
Query: 61 LING 64
+I+G
Sbjct: 358 MIHG 361
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L MI +NP+ T N L+DGFC R A+ +L M +G K D F+++
Sbjct: 263 MKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNS 322
Query: 61 LIN 63
L++
Sbjct: 323 LMD 325
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M+ +G++PD T NAL+ GFC+ + A +L M + + ++ +I
Sbjct: 228 VNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI 287
Query: 61 LING 64
L++G
Sbjct: 288 LVDG 291
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RGV D T N+++D C + D+A LL M +G + D +++ L++G
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + QRGVNP+ + + ++ GFC + D A L M D +++
Sbjct: 333 VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNS 392
Query: 61 LING 64
LI+G
Sbjct: 393 LIDG 396
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G D + A++ GFC FD + +LL M GC +A ++ I
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532
Query: 61 LI 62
+I
Sbjct: 533 II 534
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + PD T N+L+DG C + A +L+ M +G D +++
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNS 427
Query: 61 LING 64
+++
Sbjct: 428 ILDA 431
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M G+ PD T L+DG C R + AR + + KG D ++
Sbjct: 438 VDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTA 497
Query: 61 LING 64
+I G
Sbjct: 498 MIQG 501
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + MI +G PD T + ++DGFC D+AR+++ M CK + +H+
Sbjct: 354 MAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTA 413
Query: 61 LING 64
L+NG
Sbjct: 414 LLNG 417
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A AE M + GV PD T N L+ G C A R A E++ M GC D S+
Sbjct: 213 VDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYT 272
Query: 61 LIN 63
+++
Sbjct: 273 VMS 275
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--GSA 67
LM + G PD S CN ++ +A R D+A E M G + D ++++ LI G G+
Sbjct: 187 LMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGAR 246
Query: 68 RI 69
R+
Sbjct: 247 RV 248
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+A++ FCL R A+E++ M SKGC+ D ++S +++G
Sbjct: 342 SAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDG 382
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L + MI+ G+ PDT CN ++DG A+ D A +L SM S GC D ++++ILI
Sbjct: 71 LLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILI 126
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL M+++G +P+ T NAL+DGF +R D LL M +GC+ D ++++++
Sbjct: 117 EAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMIL 176
Query: 63 N 63
+
Sbjct: 177 D 177
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E MIQ G P+ ++ C R D A ++L+SM S+GCK D S+ IL+
Sbjct: 220 EALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILV 279
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L MIQ P+ T N+++ FC R + AR + M GC D S++ L
Sbjct: 359 DTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 26 LMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LM GFC A F +A ELL M S G + + H+ +I G
Sbjct: 36 LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRG 74
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L + M QRG P T N L+ FC A + D A +LL M K + +++
Sbjct: 323 LHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNS 382
Query: 61 LI 62
+I
Sbjct: 383 II 384
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + MI +G PD T + ++DGFC D+AR+++ M CK + +H+
Sbjct: 354 MAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTA 413
Query: 61 LING 64
L+NG
Sbjct: 414 LLNG 417
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A AE M + GV PD T N L+ G C A R A E++ M GC D S+
Sbjct: 213 VDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYT 272
Query: 61 LIN 63
+++
Sbjct: 273 VMS 275
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--GSA 67
LM + G PD S CN ++ +A R D+A E M G + D ++++ LI G G+
Sbjct: 187 LMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGAR 246
Query: 68 RI 69
R+
Sbjct: 247 RV 248
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+A++ FCL R A+E++ M SKGC+ D ++S +++G
Sbjct: 342 SAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDG 382
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L +LM RG PD T N ++ G C A+R D AR+LL M GC D +++
Sbjct: 258 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 317
Query: 61 LING 64
+++G
Sbjct: 318 IVSG 321
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A LA++M++R P T N ++D FC + D A EL M +GC D ++++I+I
Sbjct: 225 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 284
Query: 63 NGG 65
+G
Sbjct: 285 SGA 287
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E++ G D TC+ L+DG C + R D A +LL M G D +++I
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387
Query: 61 LING 64
LI+G
Sbjct: 388 LIHG 391
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ + E MI+ G P+ T N L++GFC D A L M C D F+++I
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177
Query: 61 LINGGSARIR 70
LI+G + R
Sbjct: 178 LIDGYCKQER 187
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M + G PD L+ GFC AD+ D++ M KGC ++SI
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 422
Query: 61 LING--GSARIR 70
+I+ SAR+R
Sbjct: 423 VIDKLCKSARVR 434
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M++ +PD T N L+DG+C +R +LL M GC+ + +++
Sbjct: 153 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 212
Query: 61 LING 64
L++
Sbjct: 213 LMDS 216
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M + G PD T N+++ G C A + D A E+ + + G D + S
Sbjct: 293 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 352
Query: 61 LING 64
LI+G
Sbjct: 353 LIDG 356
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + ELMI++G P+ T N+L++G CL + D A L M +G K D S++
Sbjct: 200 VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259
Query: 61 LING 64
LING
Sbjct: 260 LING 263
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P+ T N +++G C + A L V M GC+QD S + +I G
Sbjct: 389 GLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRG 438
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L E+M++RG+ D + N L++G+C + + + A L M + +++I
Sbjct: 235 MDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTI 294
Query: 61 LING--GSARIR 70
L+ + RIR
Sbjct: 295 LLKALYQNGRIR 306
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + MI +G PD T + ++DGFC D+AR+++ M CK + +H+
Sbjct: 321 MAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTA 380
Query: 61 LING 64
L+NG
Sbjct: 381 LLNG 384
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A AE M + GV PD T N L+ G C A R A E++ M GC D S+
Sbjct: 180 VDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYT 239
Query: 61 LIN 63
+++
Sbjct: 240 VMS 242
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--GSA 67
LM + G PD S CN ++ +A R D+A E M G + D ++++ LI G G+
Sbjct: 154 LMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGAR 213
Query: 68 RI 69
R+
Sbjct: 214 RV 215
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+A++ FCL R A+E++ M SKGC+ D ++S +++G
Sbjct: 309 SAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDG 349
>gi|296087920|emb|CBI35203.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + ++MIQ GV PD T ALMDG CL D A ++ M GC + S++ LI
Sbjct: 236 EAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLI 295
Query: 63 NG 64
N
Sbjct: 296 NA 297
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G+ + M + GV P+ T ++LM G+ L AR+L M +KGCK + FS++I
Sbjct: 319 VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNI 378
Query: 61 LING 64
LING
Sbjct: 379 LING 382
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI +G+ P+ + N L+ GFC + A++L +M + G D F++SI
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSI 448
Query: 61 LING 64
L++G
Sbjct: 449 LLDG 452
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +MI +G P+ + N L++G+C A R D A +L M +G + S++ LI
Sbjct: 356 EARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLI 415
Query: 63 NG 64
+G
Sbjct: 416 HG 417
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G+ P T L++G C F +A EL M +KGC+ D ++++ +ING
Sbjct: 154 VIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIING 207
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M+ +G PD T N +++G C A LL M GC+ + ++S LI
Sbjct: 181 QAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLI 240
Query: 63 N 63
+
Sbjct: 241 D 241
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL + M + G P+ T + L+D C + A ++ M +KG D F+++ LI
Sbjct: 217 AAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQ 276
Query: 64 G 64
G
Sbjct: 277 G 277
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+EL +Q G+ P +++G C D A E +M + GC D S++++I G
Sbjct: 501 FSELFVQ-GLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG 557
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M +G++PD T +L+ G C R+ A LL M S D + ++
Sbjct: 249 VNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNV 308
Query: 61 LIN 63
L++
Sbjct: 309 LVD 311
>gi|302811221|ref|XP_002987300.1| hypothetical protein SELMODRAFT_125836 [Selaginella
moellendorffii]
gi|300144935|gb|EFJ11615.1| hypothetical protein SELMODRAFT_125836 [Selaginella
moellendorffii]
Length = 511
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ +G PDT TCN+L+DG ++ + A +L M K DAF+++I
Sbjct: 25 VDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSRSFVKADAFTYNI 84
Query: 61 LING 64
L++G
Sbjct: 85 LLHG 88
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 6 GLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGG 65
GL E MI++G+ P TCN L++GFC A + A E + M +G D +++ LING
Sbjct: 578 GLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGL 637
Query: 66 SARIR 70
R R
Sbjct: 638 CKRGR 642
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MDEANGLA-ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
++EA + MI G PD T + L++G C F A EL+ M +KGCK + +++
Sbjct: 362 LNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYT 421
Query: 60 ILING 64
ILI+G
Sbjct: 422 ILIDG 426
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
MI RG +PD T N+L++G C R A L + ++G + D+ +++ LI
Sbjct: 618 MIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLI 669
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M+ +G + +T NAL+ C + A ++ M SKGCK D F+ +
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492
Query: 61 LING 64
LI G
Sbjct: 493 LIFG 496
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M+ +GV+P+ T +M C+ + D A LL M GC ++ + LI+ S R R
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M G PD +T N ++ GFC +R +L+ M KG + ++
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320
Query: 61 LING 64
L++G
Sbjct: 321 LMHG 324
>gi|302814999|ref|XP_002989182.1| hypothetical protein SELMODRAFT_129427 [Selaginella
moellendorffii]
gi|300143082|gb|EFJ09776.1| hypothetical protein SELMODRAFT_129427 [Selaginella
moellendorffii]
Length = 614
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ +G PDT TCN+L+DG ++ + A +L M K DAF+++I
Sbjct: 25 VDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSRSFVKADAFTYNI 84
Query: 61 LING 64
L++G
Sbjct: 85 LLHG 88
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A E M RG PD T N L+DG C A R D A L M + C D FS++I
Sbjct: 425 VDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTI 484
Query: 61 LING 64
+I
Sbjct: 485 IITA 488
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M G++PD T +AL+DG C + DRA +LL M +G D+F+ +
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414
Query: 61 LINGGS 66
++N S
Sbjct: 415 ILNALS 420
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L E M + G P+ + + L+DG C A R D A L M K C D +++
Sbjct: 160 MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTS 219
Query: 61 LING 64
+ G
Sbjct: 220 FVTG 223
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG PD T + ++ G C A D+A+ELL + G K + ++S++I+G
Sbjct: 64 MQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDG 117
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G PD T N+L+ G C +R A L M GC+ + S+S L++G
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDG 188
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+++ PD + + G C A+R A + M +KG K DA + S
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFST 254
Query: 61 LI 62
+I
Sbjct: 255 VI 256
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ + + M++RGV PDT ++L+DG D A ELL + CK D H ++++
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVVD 554
Query: 64 G 64
G
Sbjct: 555 G 555
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A E M RG PD T N L+DG C A R D A L M + C D FS++I
Sbjct: 425 VDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTI 484
Query: 61 LING 64
+I
Sbjct: 485 IITA 488
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M G++PD T +AL+DG C + DRA +LL M +G D+F+ +
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414
Query: 61 LINGGS 66
++N S
Sbjct: 415 ILNALS 420
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L E M + G P+ + + L+DG C A R D A L M K C D +++
Sbjct: 160 MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTS 219
Query: 61 LING 64
+ G
Sbjct: 220 FVTG 223
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG PD T + ++ G C A D+A+ELL + G K + ++S++I+G
Sbjct: 64 MQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDG 117
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G PD T N+L+ G C +R A L M GC+ + S+S L++G
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDG 188
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+++ PD + + G C A+R A + M +KG K DA + S
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFST 254
Query: 61 LI 62
+I
Sbjct: 255 VI 256
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ + + M++RGV PDT ++L+DG D A ELL + CK D H ++++
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVLD 554
Query: 64 G 64
G
Sbjct: 555 G 555
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS-KGCKQDAFSHS 59
+D+A L + + GV + T + ++DG C A R D A E+ +M S GC D + +
Sbjct: 89 LDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFN 148
Query: 60 ILING 64
L+ G
Sbjct: 149 SLLKG 153
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + PD T ALMDG C DR A+++L +M + C + ++S
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257
Query: 61 LING 64
LI+G
Sbjct: 258 LIDG 261
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ +PD T +L+DGFC R AR +L M +GC+ + +++
Sbjct: 408 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 467
Query: 61 LING 64
LI+
Sbjct: 468 LIDA 471
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + MI RG+ P+ T N+L+ GFC+ + D A L+ M + GC D +++ LI
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 329
Query: 63 NG 64
+G
Sbjct: 330 DG 331
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M+++ V PD T + L++G+C A D A LL M + C D ++++
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432
Query: 61 LING 64
L++G
Sbjct: 433 LVDG 436
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M G PD T N L+DG C R A L M +K C D ++S
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362
Query: 61 LING 64
LI G
Sbjct: 363 LIGG 366
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M++ G P+ T N L+ G C D A ELL M +G + D FS+
Sbjct: 93 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 152
Query: 61 LING 64
L+ G
Sbjct: 153 LMAG 156
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L + M +RG+ PD + + LM G C + D A ++ + C D ++S
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187
Query: 61 LING 64
LI G
Sbjct: 188 LIAG 191
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMG-SKGCKQDAFSHSILI 62
A L E M+ GV P+ T +L+ GFC + AR++L + + CK D F++ +++
Sbjct: 481 AYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMM 540
Query: 63 NG 64
+G
Sbjct: 541 DG 542
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L M + NPD T + L+ GFC +R D AR L M + D + S L+
Sbjct: 340 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Query: 63 NG 64
G
Sbjct: 400 EG 401
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M +RG P+ T AL+D FC A + A +LL M G + + ++
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRS 502
Query: 61 LING 64
LI G
Sbjct: 503 LIGG 506
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA M ++G P+ T N L++GFC + RA LL M G + ++S
Sbjct: 23 LPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYST 82
Query: 61 LING 64
+I+G
Sbjct: 83 VIHG 86
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M R P+ T ++L+DG C + A+E+ M +G + + +++
Sbjct: 233 LQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 292
Query: 61 LING 64
LI+G
Sbjct: 293 LIHG 296
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M +R + PD T N LM G C + + ARELL M +G + D S++
Sbjct: 497 LDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNT 556
Query: 61 LINGGSAR 68
LI+G S R
Sbjct: 557 LISGYSKR 564
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A+ L E +I+ G +PD NAL+DG C DRA LL M + D +++
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521
Query: 61 LING 64
L+ G
Sbjct: 522 LMQG 525
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A G + M++R + P ST N L+ L + D A ++ MG G D+ +++ILI
Sbjct: 359 KAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILI 418
Query: 63 NG 64
NG
Sbjct: 419 NG 420
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA+G+ + M G+ PD+ T N L++G+C +A L M SKG + +++
Sbjct: 392 MDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTS 451
Query: 61 LINGGSARIR 70
LI S R R
Sbjct: 452 LIYVLSKRNR 461
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M+ G NP T NAL+ G C + D A ELL M SKG D ++
Sbjct: 567 INDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFS 626
Query: 61 LING 64
LI G
Sbjct: 627 LIEG 630
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M GV P+ T N ++ G+C R + AR +L M ++G + D++++ LI+G
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISG 315
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + ++M RGV PD+ T +L+ G C + + A +L M G A +++
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 61 LING 64
LI+G
Sbjct: 347 LIDG 350
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + +M+++G+ P+ T +LMDG+CL + ++A + +M G D S++I
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323
Query: 61 LING 64
+ING
Sbjct: 324 MING 327
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++AN + M Q GVNPDT + N +++GFC + D A L M K + +++
Sbjct: 299 VNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTS 358
Query: 61 LING 64
LI+G
Sbjct: 359 LIDG 362
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M+ G++PD T +AL+ GF + + A +L M + K D ++ +I
Sbjct: 194 VNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNI 253
Query: 61 LING 64
L++G
Sbjct: 254 LVDG 257
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L MI + PD T N L+DGFC + + + M +G K + ++
Sbjct: 229 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 288
Query: 61 LING 64
L++G
Sbjct: 289 LMDG 292
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS--------KGCKQDAFSH 58
L + M RGV PD T ++++D C + D+A LL + KG D +++
Sbjct: 375 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAY 434
Query: 59 SILING 64
+++I G
Sbjct: 435 TVMIQG 440
Score = 34.3 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + P+ T +L+DG C + + A +L+ M +G D ++S
Sbjct: 334 VDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 393
Query: 61 LING 64
+++
Sbjct: 394 ILDA 397
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L E M R + PD T N LMDGFC ++A+EL M S+ S SI
Sbjct: 485 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSI 544
Query: 61 LING 64
LING
Sbjct: 545 LING 548
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L + M++RGV PD T L+ G+C +A L +M + K D +++
Sbjct: 450 LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNT 509
Query: 61 LING 64
L++G
Sbjct: 510 LMDG 513
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M ++G+ P TCN ++ G+ A +A + L +M S+G D +++
Sbjct: 555 VSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNT 614
Query: 61 LIN 63
LIN
Sbjct: 615 LIN 617
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +AN MI GV PD T N L++ F + FDRA L+ +M +G + +++
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649
Query: 61 LINGGSARIR 70
++ G S R
Sbjct: 650 ILGGFSRHGR 659
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 DEANGLAEL---MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
D+ +G ++ M++RG D T N L++G C D A EL M +G D ++
Sbjct: 413 DDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTL 472
Query: 59 SILING 64
+ LI+G
Sbjct: 473 TTLIHG 478
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L M +RG+ P+ T NA++ GF R A +L M KG D +++ L
Sbjct: 626 DRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSL 685
Query: 62 ING 64
ING
Sbjct: 686 ING 688
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+ EA GL + M +G+ P T NAL++G C ++RA+ +L M G C A +
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334
Query: 60 ILI 62
+L+
Sbjct: 335 MLV 337
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M G+ PDT L++G+C D A ++ M +GC D +++ L+NG
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNG 443
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++GV D T N L++ +C A L+ M KG K F+++ LING
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALING 303
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
M EA + MI +G+NPD ST +L++G+ D A + M +G
Sbjct: 660 MQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L +LM RG PD T N ++ G C A+R D AR+LL M GC D +++
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451
Query: 61 LING 64
+++G
Sbjct: 452 IVSG 455
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E+M G PDT T N++ DGF + D+A L +M S+GC F +S+
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696
Query: 61 LI 62
L+
Sbjct: 697 LL 698
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A LA++M++R P T N ++D FC + D A EL M +GC D ++++I+I
Sbjct: 359 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 418
Query: 63 NGG 65
+G
Sbjct: 419 SGA 421
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E++ G D TC+ L+DG C + R D A +LL M G D +++I
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 61 LING 64
LI+G
Sbjct: 522 LIHG 525
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
L + M++RGV PD +++DG C +D +D A EL M GC ++++L++
Sbjct: 573 LLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVD 629
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ + E MI+ G P+ T N L++GFC D A L M C D F+++I
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311
Query: 61 LING 64
LI+G
Sbjct: 312 LIDG 315
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L +LM Q G P T N L+D C R D A LL M S GC D +++ +
Sbjct: 603 DEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSV 662
Query: 62 ING 64
+G
Sbjct: 663 FDG 665
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M + G PD L+ GFC AD+ D++ M KGC ++SI
Sbjct: 497 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 556
Query: 61 LING--GSARIR 70
+I+ SAR+R
Sbjct: 557 VIDKLCKSARVR 568
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M++ +PD T N L+DG+C +R +LL M GC+ + +++
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 346
Query: 61 LIN 63
L++
Sbjct: 347 LMD 349
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M + G PD T N+++ G C A + D A E+ + + G D + S
Sbjct: 427 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 486
Query: 61 LING 64
LI+G
Sbjct: 487 LIDG 490
>gi|147742778|gb|ABQ50558.1| hypothetical protein [Brassica rapa]
Length = 277
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG++PDT T +L+ G C+ +R D A +++ M SKGC+ ++ LING
Sbjct: 5 MVPRGIDPDTITYTSLIYGLCMENRLDEANQMMDLMVSKGCEPSIVTYGTLING 58
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + +LM+ +G P T L++G+C A R +L + +G + ++S
Sbjct: 30 LDEANQMMDLMVSKGCEPSIVTYGTLINGYCKAKRVVDGMKLFREISLRGLVANTVTYST 89
Query: 61 LING 64
LI G
Sbjct: 90 LIQG 93
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG+ +T T + L+ GFC A + + A+EL M S+G ++ IL++G
Sbjct: 78 RGLVANTVTYSTLIQGFCEAGKLNVAKELFQEMVSRGVSPSVVTYGILLDG 128
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQR-GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
EA L E MI + G++PD T N +++GFC A +RA+++L M GC + +++S L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 62 ING 64
+NG
Sbjct: 310 MNG 312
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + M + G NP+ +ALM+GFC + A++ + G K D ++
Sbjct: 284 VERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT 343
Query: 61 LIN 63
L+N
Sbjct: 344 LMN 346
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + +M Q G+ P T N ++D +C R D+A ELL M +GC + ++++
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255
Query: 61 LINGGSAR 68
L+NG S +
Sbjct: 256 LVNGLSKK 263
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M+++ V + T NA+++G C+ R D A + M KG + FS++ILIN
Sbjct: 591 MLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E M+ G+ PD T ++++GF +ARE+ M SKG ++++L
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVL 571
Query: 62 INGGSAR 68
I+ +A+
Sbjct: 572 IHAHAAK 578
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +RG P+ T N L++G ++A+ L+ M + G A++++
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 61 LING 64
LING
Sbjct: 291 LING 294
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
R + P T N L+ G C+ D A L M +G D F+++IL+NG
Sbjct: 384 RDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+++A GL E M+ G+N T N L++GFC F A +L+ M
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA G+ + M+++G+ PD + + ++ GFC DRA ++ M KG DA ++S
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499
Query: 61 LING 64
LI G
Sbjct: 500 LIQG 503
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL + M +G+ P+ + N +++G C A E+L MG KG D +++
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324
Query: 61 LING 64
L+NG
Sbjct: 325 LLNG 328
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G P+ T N L+D +C R D A LL SM SKG + + S++++ING
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIING 293
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M+++GV+PD T ++L+ G C R A +L M G D F+++
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534
Query: 61 LING 64
LIN
Sbjct: 535 LINA 538
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L++ M+ G+ PD T L++ +C+ ++A L M KG DA ++S+
Sbjct: 510 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 569
Query: 61 LINGGSARIR 70
LING + + R
Sbjct: 570 LINGLNKQAR 579
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M + G +P T NA + G C+ +R + A ++ M KG D S+S
Sbjct: 405 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464
Query: 61 LING 64
+I+G
Sbjct: 465 IISG 468
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
M++ GV+P T AL++ C A +RA E M +G + + +++ LI+G S
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFS 400
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + E M +G PD T N L++G+C F +A + M G +++
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359
Query: 61 LIN 63
LIN
Sbjct: 360 LIN 362
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L +M++ G PD T AL++G C DR A L M +GC D +H++
Sbjct: 222 LHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 281
Query: 61 LIN 63
L++
Sbjct: 282 LVS 284
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M+++G+ PD N L+DGFC ADR D A +++ M G + +++ L+
Sbjct: 370 MLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLV 421
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M G PD T N L+ G C+ R A++LL M G + D + +
Sbjct: 187 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTA 246
Query: 61 LING 64
LI G
Sbjct: 247 LIEG 250
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A GL +LM R +P + ++++G C + D+A +L M GCK D +++ L
Sbjct: 153 ETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 212
Query: 62 INGGSARIR 70
I+G + R
Sbjct: 213 IHGLCVKQR 221
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P T L+D FC +F+ A LL M S+ C +S+ +ING
Sbjct: 131 GITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + M+Q+G+ P+ T AL DG C D A ELL M KG + + ++++
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492
Query: 61 LING 64
++NG
Sbjct: 493 IVNG 496
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L E M+++G+ P+ +T N+LM +C+ + E+ +M +G D+ +++I
Sbjct: 573 LEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNI 632
Query: 61 LING 64
LI G
Sbjct: 633 LIKG 636
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + M+ +G+ PD T AL+DG+C A A + M KG + +++
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457
Query: 61 LING 64
L +G
Sbjct: 458 LADG 461
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L E M G PDT T LMD +C +A ELL M +K + + ++
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562
Query: 61 LING 64
L+NG
Sbjct: 563 LMNG 566
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ L +M+ + + P T N LM+GFC++ + L+ M KG +A + +
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597
Query: 61 LI 62
L+
Sbjct: 598 LM 599
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RGV PD++T N L+ G C A A L M KG A ++ LI G
Sbjct: 618 MHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRG 671
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + +MI++ V+PD T N+LMDG+ L + ++A + +M +G D S+S+
Sbjct: 205 MKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSV 264
Query: 61 LING 64
+ING
Sbjct: 265 MING 268
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M+ + + PD T N L+DG C +AR +L M + D +++
Sbjct: 170 LKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNS 229
Query: 61 LING 64
L++G
Sbjct: 230 LMDG 233
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M RG D T N+L+D C + D+A LL + +G + D ++++IL+
Sbjct: 312 DAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILV 371
Query: 63 NG 64
+G
Sbjct: 372 DG 373
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RGV PD + + +++G C D A LL M SK + ++S LI+G
Sbjct: 250 MARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDG 303
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + +M Q G+ P T N ++D +C R D+A ELL M +GC + ++++
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255
Query: 61 LINGGSAR 68
L+NG S +
Sbjct: 256 LVNGLSKK 263
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M+++ V + T NA+++G C+ R D A + M KG + FS++ILIN
Sbjct: 591 MLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E M+ G+ PD T ++++GF +ARE+ M SKG ++++L
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVL 571
Query: 62 INGGSAR 68
I+ +A+
Sbjct: 572 IHAHAAK 578
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +RG P+ T N L++G ++A+ L+ M + G A++++
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 61 LING 64
LING
Sbjct: 291 LING 294
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
R + P T N L+ G C+ D A L M +G D F+++IL+NG
Sbjct: 384 RDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+++A GL E M+ G+N T N L++GFC F A +L+ M
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A+GL + MI+RG PD + + ++ GFC ++A +L V M +KG D ++S
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 61 LING 64
LI G
Sbjct: 489 LIQG 492
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M++ G P T NAL++G C+ R + A LL M +G D S+S
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 61 LING 64
+I+G
Sbjct: 454 IISG 457
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ E L + M+ G+ PD T +L++ +C+ D+A L M KG D ++++
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 61 LINGGSARIR 70
LING + + R
Sbjct: 559 LINGFNKQSR 568
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ +G++PD +T ++L+ G C R +L M S G D +++
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523
Query: 61 LING 64
LIN
Sbjct: 524 LINA 527
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M++ G++P+ T L++ C A +RA E L M +G + +++ LI+G S +
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + MIQ+G +PD T N L++GF R A+ LL+ + + + +++
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593
Query: 61 LIN 63
LI+
Sbjct: 594 LID 596
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ + M++ GV+P+ T N L+ GFC A + M GC + +++ +I+
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246
Query: 64 GGSARIRK 71
++RK
Sbjct: 247 -AYCKLRK 253
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L LM +G+NP+ + N +++G C + E+L M + D + + LI
Sbjct: 256 EAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLI 315
Query: 63 NG 64
NG
Sbjct: 316 NG 317
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + + E M +R PD T N L++G+C F +A L M G + +++
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348
Query: 61 LIN 63
LIN
Sbjct: 349 LIN 351
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G P+ T N ++D +C + A +LL M KG + S++++ING
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A+GL + MI+RG PD + + ++ GFC ++A +L V M +KG D ++S
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 61 LING 64
LI G
Sbjct: 489 LIQG 492
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M++ G P T NAL++G C+ R + A LL M +G D S+S
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 61 LING 64
+I+G
Sbjct: 454 IISG 457
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ E L + M+ G+ PD T +L++ +C+ D+A L M KG D ++++
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 61 LINGGSARIR 70
LING + + R
Sbjct: 559 LINGFNKQSR 568
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ + M++ GV+P+ T N L+ GFC A + M GC + +++ +I+
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246
Query: 64 GGSARIRK 71
++RK
Sbjct: 247 -AYCKLRK 253
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ +G++PD +T ++L+ G C R +L M S G D +++
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523
Query: 61 LING 64
LIN
Sbjct: 524 LINA 527
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M++ G++P+ T L++ C A +RA E L M +G + +++ LI+G S +
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + MIQ+G +PD T N L++GF R A+ LL+ + + + +++
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593
Query: 61 LIN 63
LI+
Sbjct: 594 LID 596
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L LM +G+NP+ + N +++G C + E+L M + D + + LI
Sbjct: 256 EAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLI 315
Query: 63 NG 64
NG
Sbjct: 316 NG 317
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + + E M +R PD T N L++G+C F +A L M G + +++
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348
Query: 61 LIN 63
LIN
Sbjct: 349 LIN 351
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G P+ T N ++D +C + A +LL M KG + S++++ING
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282
>gi|298204661|emb|CBI25159.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E M++ G+ PD+ TCN L+ C R A EL + SKG D + +IL
Sbjct: 447 EEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANELRLLASSKGLDSDGMTFNIL 506
Query: 62 INGGS 66
+NG S
Sbjct: 507 VNGYS 511
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
E MI+ V PD T N+L+ C +F A E+ M KGC + S + LI GS R
Sbjct: 279 EKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIK-GSFR 337
Query: 69 IRK 71
RK
Sbjct: 338 ERK 340
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E G+A M++ G TC L+DG C R A +LL+ KG + F + L
Sbjct: 342 EEGIGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCL 401
Query: 62 I 62
I
Sbjct: 402 I 402
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L ++MI++G+ P TCN ++ G+C + +A E L M +KG D S++
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508
Query: 61 LING 64
LING
Sbjct: 509 LING 512
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L M QR + PD N L+DGFC ++A EL M S+ + ++ I
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438
Query: 61 LING 64
LIN
Sbjct: 439 LINA 442
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A M + G+ PD T N +M+GFC R A +L M KG D +++
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578
Query: 61 LING 64
LING
Sbjct: 579 LING 582
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI +GV PD + N L++GF D D+A + M +G D ++++++NG
Sbjct: 494 MIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNG 547
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M +G+ P T NA+++G C R+ RA+ +L+ M + G D +++
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228
Query: 61 LI 62
L+
Sbjct: 229 LL 230
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A G+ M+ G++PDT+T N L+ C D F A+E+ M +G D S S LI
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLI 265
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
D+ M G+ D T N L+ +C + A E++ SM KG K F+++
Sbjct: 134 FDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNA 193
Query: 61 LING 64
+ING
Sbjct: 194 IING 197
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ L + M++RG PD T L+ G C +A L +M + K D +++
Sbjct: 344 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 403
Query: 61 LING 64
LI+G
Sbjct: 404 LIDG 407
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD 54
M EA + MI++G+NPD ST AL++G D + A M +G D
Sbjct: 554 MQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M+++G P+ T ++LMDG+CL ++A+ + +M G D S++ILI
Sbjct: 237 EAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILI 296
Query: 63 NG 64
NG
Sbjct: 297 NG 298
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG PD T ++L+D C D+A LL + +G + + ++++ILING
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILING 403
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M Q GVNPD + N L++GFC D A L M + + +++
Sbjct: 270 VNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNS 329
Query: 61 LING 64
LI+G
Sbjct: 330 LIDG 333
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L E M R + P+ T N+L+DG C + + A +L+ M +G D ++S L
Sbjct: 306 DAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSL 365
Query: 62 ING 64
++
Sbjct: 366 LDA 368
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M + G +PD T LM+GFC R D A +LL M KG D + +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 61 LING 64
L++G
Sbjct: 297 LMDG 300
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M ++G+ PD T +LMDG C +R A +L M K C ++++
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 331
Query: 61 LING 64
+++G
Sbjct: 332 ILDG 335
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M ++ V P T N+L+ G C A+R A +LL M GC D F+++
Sbjct: 97 VDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155
Query: 61 LING 64
LI G
Sbjct: 156 LITG 159
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ G PD T L+ GFC + + D A + + ++G + D ++S LI
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 63 NG 64
+G
Sbjct: 193 DG 194
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA L MI+ G P+T T N+L+ GFC + D A LL M G D +++
Sbjct: 201 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260
Query: 60 ILING 64
L+NG
Sbjct: 261 TLMNG 265
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA E M R + P+ T L+DG C R D A LL M K C A +++
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNS 120
Query: 61 LING 64
LI+G
Sbjct: 121 LISG 124
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSI 60
D+A + E ++ RG PD T + L+DG C R A +L M G C + +++
Sbjct: 167 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 226
Query: 61 LING 64
LI+G
Sbjct: 227 LISG 230
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++ +P T N ++DG+C A++ + AR+ ++ C + S +I+I G
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRG 368
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + + PD T N+L+DG C +RA LL M G + D +S++I
Sbjct: 287 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTI 346
Query: 61 LING 64
L++G
Sbjct: 347 LLDG 350
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M + G+ PD + L+DG C R + A+E + KGC + + +++
Sbjct: 322 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNV 381
Query: 61 LING 64
+ING
Sbjct: 382 MING 385
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI +G++PD T L+ GFC+ + A LL M K D ++ S+LI+
Sbjct: 224 MIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDA 277
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L M+++G+ P+ T AL+DG C D A ELL M KG + + +++
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502
Query: 61 LING 64
LING
Sbjct: 503 LING 506
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M+ +G+ PD T AL+DG+C A A L M KG + +++ L+
Sbjct: 410 EARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALV 469
Query: 63 NG 64
+G
Sbjct: 470 DG 471
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M G PDT T +MD +C +A ELL M KG + + ++
Sbjct: 513 IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNV 572
Query: 61 LING 64
L+NG
Sbjct: 573 LMNG 576
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L + M+ +G+ P+ +T N+LM +C+ + E+ M ++G D +++I
Sbjct: 583 LEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNI 642
Query: 61 LING 64
LI G
Sbjct: 643 LIKG 646
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M ++ + PD T +++ G C A + AR+L M SKG K D +++ LI+G
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ L +M+ +G+ P T N LM+GFC++ + L+ M KG +A + +
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607
Query: 61 LI 62
L+
Sbjct: 608 LM 609
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D AN L M ++G+ P+ T NAL++G C ++A +L+ M G D +++
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537
Query: 61 LING 64
+++
Sbjct: 538 IMDA 541
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L M RG PD + + ++DG+C ++ + +L+ + KG K + ++++ +I
Sbjct: 270 EAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSII 329
Query: 63 N 63
+
Sbjct: 330 S 330
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +GV PDT+T N L+ G C A A L M KG A S++ LI G
Sbjct: 628 MHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKG 681
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M Q+G++P+ T NAL++G C A +RAREL + KG +A +++ +I+G
Sbjct: 678 LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDG 735
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G +P T N ++ G C A D A EL M KG D F++SILI+G
Sbjct: 262 MEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDG 315
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + ++M ++GV PD N+++ G C + + + A++ LV M +G K + +++ LI
Sbjct: 499 EAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALI 558
Query: 63 NG 64
+G
Sbjct: 559 HG 560
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A+ L MI G+ PDT T N +++G+ R ++LL M A++ +
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451
Query: 61 LING 64
+ING
Sbjct: 452 IING 455
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+Q+G TS+ NALMDGFC + + A +LL M K K D +++ILI+
Sbjct: 788 VQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILID 838
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +LM ++G+ D T + L+DGF R A+ +L M SKG K +++
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 61 LING 64
LI+G
Sbjct: 347 LIDG 350
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M+ R V+PD T +AL+ G + A ELL KG D F+++ +I
Sbjct: 604 EATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSII 663
Query: 63 NG 64
+G
Sbjct: 664 SG 665
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L E M+ + V PD T L+D C A + V M + +A +++ L+
Sbjct: 813 EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872
Query: 63 NG 64
+G
Sbjct: 873 SG 874
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 6 GLAELM---IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
G EL+ +++G+ PD T N+++ GFC +A +L M KG + +++ LI
Sbjct: 639 GAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALI 698
Query: 63 NG 64
NG
Sbjct: 699 NG 700
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A GL + M ++G+ P S NAL+DGFC +D AR + S+ KG + +++
Sbjct: 679 MEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTT 738
Query: 61 LING 64
LI+G
Sbjct: 739 LIDG 742
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L M + G++P+ T + +++G C +RA LL M + G K +AF ++ L
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494
Query: 62 ING 64
I+G
Sbjct: 495 ISG 497
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G + M G+ PD T A+++G C R D+A+ LL M G + +S
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 61 LING 64
LI+G
Sbjct: 354 LIDG 357
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
+I +G+ P+ T L+DG+C A A +L M ++G DAF +S+L G S
Sbjct: 724 IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCS 779
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M GV P+ T + L+ G C R RA +L M G D +++++
Sbjct: 365 DEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLV 424
Query: 62 ING 64
I G
Sbjct: 425 IEG 427
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A+GL E MI G+ P+ L+ G+C F A E L M + D + ++ L
Sbjct: 470 ERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSL 529
Query: 62 INGGS 66
I G S
Sbjct: 530 IIGLS 534
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G++PD T + L++ +C + A++++ M GC + +++ LI G
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M + G +PD T LM+GFC R D A +LL M KG D + +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 61 LING 64
L++G
Sbjct: 297 LMDG 300
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M ++G+ PD T +LMDG C +R A +L M K C ++++
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 331
Query: 61 LING 64
+++G
Sbjct: 332 ILDG 335
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M ++ V P T N+L+ G C A+R A +LL M GC D F+++
Sbjct: 97 VDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155
Query: 61 LING 64
LI G
Sbjct: 156 LITG 159
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ G PD T L+ GFC + + D A + + ++G + D ++S LI
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 63 NG 64
+G
Sbjct: 193 DG 194
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA L MI+ G P+T T N+L+ GFC + D A LL M G D +++
Sbjct: 201 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260
Query: 60 ILING 64
L+NG
Sbjct: 261 TLMNG 265
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA E M R + P+ T L+DG C R D A LL M K C A +++
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNS 120
Query: 61 LING 64
LI+G
Sbjct: 121 LISG 124
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSI 60
D+A + E ++ RG PD T + L+DG C R A +L M G C + +++
Sbjct: 167 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 226
Query: 61 LING 64
LI+G
Sbjct: 227 LISG 230
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++ +P T N ++DG+C A++ + AR+ ++ C + S +I+I G
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRG 368
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA G+ E M +RG PDT T N +++ FC F+ A LL M KGCK D S++++
Sbjct: 273 EEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVI 332
Query: 62 I 62
+
Sbjct: 333 L 333
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
EAN L E M +RG PD + L DGFC +F A +L M KG
Sbjct: 344 EANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKG 391
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA L E M+ + + PD T NAL++GFC ++ DRA +++ M GC + F++S
Sbjct: 252 LKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYS 311
Query: 60 ILING 64
L+NG
Sbjct: 312 ALMNG 316
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M + G NP+ +ALM+GFC R + A+E+ M S G K D ++
Sbjct: 288 VDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTT 347
Query: 61 LIN 63
LIN
Sbjct: 348 LIN 350
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M G+ PDT L++ FC A R D A ELL M C+ D + ++
Sbjct: 323 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNV 382
Query: 61 LING 64
++ G
Sbjct: 383 ILGG 386
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + DT T N ++ G C RF+ AR +L + +G + S+ I
Sbjct: 358 VDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRI 417
Query: 61 LIN 63
++N
Sbjct: 418 VLN 420
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA G+ LM++RG PD T N L+ G CL AR+L ++ +G D +S++I
Sbjct: 310 MIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTI 369
Query: 61 LING 64
LI G
Sbjct: 370 LIIG 373
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +M + + PD+ T N+L DG C + R A EL M G D ++++L+
Sbjct: 487 EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546
Query: 63 NG 64
+
Sbjct: 547 DA 548
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--GSARIRK 71
G P+ T N L+D FC D EL M KG +++ILING S RIR+
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIRE 487
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + + +RG+ PD + L+ G+C R D A L M K D +S LI
Sbjct: 347 EARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLI 406
Query: 63 NG--GSARI 69
+G S RI
Sbjct: 407 DGLCKSGRI 415
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ + +NP+ T N L+D FC + A+ + M +G + D + + LI+G
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISG 338
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ G++PD T +L+ GFC ++ ++L+ M +K + ++ ++LI+
Sbjct: 250 IVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDA 303
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M +RG+ PD T N+L+DG C + R + AR+LL +M + + + +++
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248
Query: 61 LING 64
LI G
Sbjct: 249 LIYG 252
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ L E MIQ G +PD T N+L+ GFC + D+A E+L M C + ++++LI+
Sbjct: 262 AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLIS 321
Query: 64 G 64
G
Sbjct: 322 G 322
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
DEA L + M G P+ T N+LM+G C + R D AR LL M GC A ++ +
Sbjct: 399 FDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEV 458
Query: 61 LING 64
L+ G
Sbjct: 459 LVTG 462
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +M + G +P ST L+ G C A R D A+E+LV M S+G + S
Sbjct: 434 LDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGT 493
Query: 61 LIN 63
+++
Sbjct: 494 IVH 496
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L E M++R V P+ T N L+ G+C A +L+ M G D + +
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283
Query: 61 LING 64
LI+G
Sbjct: 284 LISG 287
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD+ N L+ G C A++ AR+++ M +G D +++ LI+G
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDG 217
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 22 TCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
T N L+ GFC A +RA +LL M +G D +HS ++
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQA 149
>gi|302820653|ref|XP_002991993.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
gi|300140235|gb|EFJ06961.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
Length = 331
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + L M++ G P+ +T NA+++G C R + AR ++ M S+GC DA +H
Sbjct: 174 LDEGSELLRQMVESGCVPELATFNAVIEGLCKVRRVENARWVMNEMASQGCSPDAATHRF 233
Query: 61 LING 64
L+
Sbjct: 234 LLEA 237
Score = 38.1 bits (87), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M +G +PD +T L++ C D+ D A + M + GC D ++S
Sbjct: 209 VENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIATGCLPDTVTYSF 268
Query: 61 LIN 63
LI
Sbjct: 269 LIK 271
>gi|302816300|ref|XP_002989829.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
gi|300142395|gb|EFJ09096.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
Length = 331
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + L M++ G P+ +T NA+++G C R + AR ++ M S+GC DA +H
Sbjct: 174 LDEGSELLRQMVESGCVPELATFNAVIEGLCKVRRVENARWVMNEMASQGCSPDAATHRF 233
Query: 61 LING 64
L+
Sbjct: 234 LLEA 237
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M +G +PD +T L++ C D+ D A + M + GC D ++S
Sbjct: 209 VENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIATGCLPDTVTYSF 268
Query: 61 LIN 63
LI
Sbjct: 269 LIK 271
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M+ RG+ PD T NA++ G C +D +L+ M S+GC+ + ++SI
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSI 282
Query: 61 LIN 63
LI+
Sbjct: 283 LIS 285
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ++MI++ + PDT + + L+ C R D A ++ M S GC D +++
Sbjct: 293 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 352
Query: 61 LI 62
++
Sbjct: 353 IL 354
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+ + E++ + PD NA++ GFC +R + A ++L M ++G D +++I
Sbjct: 119 IEKASRVMEIL-ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNI 177
Query: 61 LI 62
+I
Sbjct: 178 MI 179
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + MI +G +PD T A+++G C + + A+++L M GCK + S++
Sbjct: 363 MDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTA 422
Query: 61 LING 64
L+NG
Sbjct: 423 LLNG 426
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA +RG D +A+++ FC+ R DRA+E++ M +KGC D +++ +
Sbjct: 329 DEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAV 388
Query: 62 ING 64
+NG
Sbjct: 389 VNG 391
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+++A E M G+ P+ T N L+ G+C + + A EL+ M KGC D S+
Sbjct: 222 LEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSY 279
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LM+++G+ PD T L+DGFC R A+ + SM S G + F+++
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351
Query: 61 LING 64
LI+G
Sbjct: 352 LIDG 355
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
L ++MI GV PD N L+ G C A + + A+ LLV MG KG K +A ++ IN
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L M+ G+ PDT T N L+DG+ + +A ELL M ++ F++S+
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456
Query: 61 LING 64
LI+G
Sbjct: 457 LISG 460
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+ L + M+ G+NP+ N L++G C +AREL + K D ++S
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736
Query: 61 LING 64
+I+G
Sbjct: 737 IIDG 740
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + + ++ + PD T + ++DG+C + A +L M SKG D + + ILI
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 63 NG 64
+G
Sbjct: 774 DG 775
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ ++ GV PD N+L+ GFC ++A +L M G + ++ LI
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703
Query: 63 NG 64
NG
Sbjct: 704 NG 705
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +AN + + MI+ GV P+ L+ + R++ A ELL M + G D F ++
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 61 LING 64
LI G
Sbjct: 527 LIIG 530
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + MI RG+ + T NA++ G A +A L M G + D +++++
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNL 421
Query: 61 LING 64
LI+G
Sbjct: 422 LIDG 425
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E M G+NP+ T AL+DGF + A + M ++G K + +++ +I
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 63 NG 64
G
Sbjct: 389 GG 390
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + L+I G PD T N+L+DG+CL + D+A +L +M S G + D ++S LIN
Sbjct: 572 AQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLIN 631
Query: 64 G 64
G
Sbjct: 632 G 632
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M + G+ PD T N+LMD C R A E+ S+ +KG K D S+SIL+
Sbjct: 360 EAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419
Query: 63 NG 64
+G
Sbjct: 420 HG 421
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M+Q+GV P+ T N+++ C A D+A +L M + D +++
Sbjct: 288 ISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTA 347
Query: 61 LINGGS 66
+I+G S
Sbjct: 348 MIHGYS 353
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A G+ + M+ G PD T + L++G+ + R D L M K K ++S+
Sbjct: 604 MDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSL 663
Query: 61 LING 64
+++G
Sbjct: 664 VLDG 667
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MDEANGLA-ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
MDEA L E+ G+ P T N L+DGFC + RA EL+ MG+KG D+ ++
Sbjct: 341 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYR 400
Query: 60 ILINGGS 66
ILI G S
Sbjct: 401 ILIAGLS 407
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E+ + E M+ G NPD N +M GF ++ ++ARE+ M G K D S+ IL
Sbjct: 27 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 86
Query: 62 ING 64
I+G
Sbjct: 87 IHG 89
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E L E M G P+ T + L+ G C ++A E+ SM GCK + ++++
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295
Query: 61 LING 64
LI+G
Sbjct: 296 LISG 299
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++AN L M +PD T N L+D C A R + +L +M + G + + S
Sbjct: 201 LEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFST 260
Query: 61 LING 64
LI+G
Sbjct: 261 LIHG 264
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M++ G P+ T L+ G C A++ +AREL M DA +++ LI G R
Sbjct: 281 MLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 338
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ L + MI+ G +PD L+ G C A + A E M GC+ + +++
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190
Query: 61 LING 64
L++G
Sbjct: 191 LLHG 194
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LM+++G+ PD T L+DGFC R A+ + SM S G + F+++
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351
Query: 61 LING 64
LI+G
Sbjct: 352 LIDG 355
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
L ++MI GV PD N L+ G C A + + A+ LLV MG KG K +A ++ IN
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L M+ G+ PDT T N L+DG+ + +A ELL M ++ F++S+
Sbjct: 397 MAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456
Query: 61 LING 64
LI+G
Sbjct: 457 LISG 460
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMD--GFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+++A+ L + M+ G+NP+ N L++ G+C + A +L M SKG D + +
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIY 736
Query: 59 SILING 64
ILI+G
Sbjct: 737 CILIDG 742
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +AN + + MI+ GV P+ L+ + R++ A ELL M + G D F ++
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 61 LING 64
LI G
Sbjct: 527 LIIG 530
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + MI RG+ + T NA++ G A +A L M G + D +++++
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNL 421
Query: 61 LING 64
LI+G
Sbjct: 422 LIDG 425
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E M G+NP+ T AL+DGF + A + M ++G K + +++ +I
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 63 NG 64
G
Sbjct: 389 GG 390
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M++RG+ PD + N LM G C RF A++LLV M + DAF ++
Sbjct: 428 VDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNAT 487
Query: 61 LING 64
L++G
Sbjct: 488 LVDG 491
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +L I+RG++ CNA++ G+C + A M + D F++S
Sbjct: 498 LDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYST 557
Query: 61 LING 64
+I+G
Sbjct: 558 IIDG 561
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA MI+ G PD +T N L++G C + A ELL +G + FS++ LI
Sbjct: 325 EAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLI 384
Query: 63 NGGS 66
+ S
Sbjct: 385 HAFS 388
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E I+RG+ P+ + L+ F + RA ELL+ M +G D ++ L+
Sbjct: 360 EAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALV 419
Query: 63 NG 64
+G
Sbjct: 420 HG 421
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E+MI++G P+ T L+ G C A+R A++LL M GC + ++S
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307
Query: 61 LING 64
+ING
Sbjct: 308 VING 311
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L +LM +R P+ T N L+DG C A R + AR+L M GC D +++
Sbjct: 318 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 377
Query: 61 LING 64
LI+G
Sbjct: 378 LIDG 381
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M + G PD TCN L+ G+C + R D AR+LL M G + + +H +
Sbjct: 637 VDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDL 696
Query: 61 L 61
L
Sbjct: 697 L 697
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++I +G P N +++GFC A D A +LL M KGC + F+ +ILI G
Sbjct: 222 VVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITG 276
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ G +P+ T + +++G C + D A EL M + C + +H+ILI
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 344
Query: 63 NG 64
+G
Sbjct: 345 DG 346
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + E M+ G P+ ST N ++ C A + D A EL+ M GC D + + L
Sbjct: 603 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTL 662
Query: 62 ING 64
I G
Sbjct: 663 IGG 665
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD T AL+ C A +FD A+ +L M ++GC D + S LI+G
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDG 170
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK-QDAFSHS 59
++EA L M + G PD T N+L+DG C + + D A +L ++ G +A ++S
Sbjct: 353 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 412
Query: 60 ILINGGSA 67
L +G +A
Sbjct: 413 TLFHGYAA 420
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G P +T +A++ G + +RA +L SM ++GC DA +++++ G
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 522
>gi|225466900|ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 588
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E M++ G+ PD+ TCN L+ C R A EL + SKG D + +IL
Sbjct: 480 EEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANELRLLASSKGLDSDGMTFNIL 539
Query: 62 INGGS 66
+NG S
Sbjct: 540 VNGYS 544
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
E MI+ V PD T N+L+ C +F A E+ M KGC + S + LI GS R
Sbjct: 312 EKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIK-GSFR 370
Query: 69 IRK 71
RK
Sbjct: 371 ERK 373
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E G+A M++ G TC L+DG C R A +LL+ KG + F + L
Sbjct: 375 EEGIGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCL 434
Query: 62 I 62
I
Sbjct: 435 I 435
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA L E M+ + + PD T + L+ GFC + DRAR+++ M S GC + F++S
Sbjct: 251 LKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYS 310
Query: 60 ILING 64
+L+NG
Sbjct: 311 VLMNG 315
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + E M G +P+ + LM+GFC R + A+E+ M S G K D ++ L
Sbjct: 288 DRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTL 347
Query: 62 IN 63
IN
Sbjct: 348 IN 349
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M G+ PDT L++ FC R D A ELL M CK DA + ++
Sbjct: 322 LEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNV 381
Query: 61 LING 64
L+ G
Sbjct: 382 LLKG 385
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + D T N L+ G C RFD A +L ++ +G + S+ I
Sbjct: 357 IDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRI 416
Query: 61 LIN 63
++N
Sbjct: 417 VLN 419
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA G+ ++M++ G P T NAL++ FC D+ D A +LL +M CK + ++SI+
Sbjct: 205 EEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIM 264
Query: 62 IN 63
+
Sbjct: 265 VQ 266
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A+ +M + G +T+T N+L++GFC R D A +L M ++G D+ ++S+
Sbjct: 309 MDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSV 368
Query: 61 LING 64
LI G
Sbjct: 369 LIQG 372
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA E ++ G P+ CNA + G C D A L M +GC+ + +++
Sbjct: 274 MVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNS 333
Query: 61 LING 64
L+ G
Sbjct: 334 LVEG 337
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N LA +MIQ G+ P T N+LMDG+ L + ++A+ + +M G D S+SILING
Sbjct: 198 NVLAMMMIQ-GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILING 256
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M Q GV+PD + + L++GFC D A ELL M K + ++S
Sbjct: 228 VNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSS 287
Query: 61 LING 64
LI+G
Sbjct: 288 LIDG 291
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L MI +NPD T L+DGFC R A+ +L M +G K +++
Sbjct: 158 LKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNS 217
Query: 61 LING 64
L++G
Sbjct: 218 LMDG 221
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G N + T ++ GFC FD A LL M GC +A ++ I
Sbjct: 368 LEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEI 427
Query: 61 LI 62
+I
Sbjct: 428 II 429
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +ANG+ I +G PD T N L+DG+C D+A E+L +M S G D +++
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501
Query: 61 LING 64
L+NG
Sbjct: 502 LLNG 505
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M+ G+ PD T N L++G C A + D + +M KGC + +++I
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 61 LI 62
LI
Sbjct: 537 LI 538
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E ++ G+ PD + N L+ GFC + A L M + G + + F+++
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 61 LING 64
+ING
Sbjct: 327 IING 330
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M+ GV P+ T N +++GFC A A ++L KG D F++S LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 63 NG 64
NG
Sbjct: 364 NG 365
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ E+ L +++RGV P+ T N + G C D A LL S+ S+G D S++
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291
Query: 61 LING 64
LI G
Sbjct: 292 LICG 295
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++ G +PD T N +++G C A +L +KGC D F+ + LI
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468
Query: 63 NG 64
+G
Sbjct: 469 DG 470
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ PD T M FC+ R A LL +M +GC+ +A S+ +I+G
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISG 190
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ RG+ PD T N ++ G C DRA E++ ++ KGC+ D S++I
Sbjct: 240 VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNI 299
Query: 61 LI 62
L+
Sbjct: 300 LL 301
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L +LM ++G+ PD + + L+ FC R D A E L +M S GC D +++
Sbjct: 345 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 404
Query: 61 LI 62
++
Sbjct: 405 VL 406
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P T N ++ GFC A R + A ++L SM GC+ + ++++LI G
Sbjct: 501 HPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L E M+++G NPD C L+ GF +A ++ + G + D F+++ LI
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALI 161
Query: 63 NG 64
NG
Sbjct: 162 NG 163
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
++++ PD NAL++GFC +R D A +L M SK D +++I+I +R
Sbjct: 145 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 202
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M + +PDT T N ++ C + D A ++L + S C+ +++I
Sbjct: 170 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTI 229
Query: 61 LING 64
LI
Sbjct: 230 LIEA 233
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G++PD T N+++ C D+A ELLV M S +++I++ G
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLG 513
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA G+ + M+++G+ PD + + ++ GFC DRA ++ M KG DA ++S
Sbjct: 236 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 295
Query: 61 LING 64
LI G
Sbjct: 296 LIQG 299
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL + M +G+ P+ + N +++G C A E+L MG KG D +++
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 61 LING 64
L+NG
Sbjct: 121 LLNG 124
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G P+ T N L+D +C R D A LL SM SKG + + S++++ING
Sbjct: 36 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIING 89
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M+++GV+PD T ++L+ G C R A +L M G D F+++
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 330
Query: 61 LING 64
LIN
Sbjct: 331 LINA 334
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L++ M+ G+ PD T L++ +C+ ++A L M KG DA ++S+
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365
Query: 61 LINGGSARIR 70
LING + + R
Sbjct: 366 LINGLNKQAR 375
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M + G +P T NA + G C+ +R + A ++ M KG D S+S
Sbjct: 201 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 260
Query: 61 LING 64
+I+G
Sbjct: 261 IISG 264
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
M++ GV+P T AL++ C A +RA E M +G + + +++ LI+G S
Sbjct: 141 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFS 196
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + E M +G PD T N L++G+C F +A + M G +++
Sbjct: 96 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 155
Query: 61 LIN 63
LIN
Sbjct: 156 LIN 158
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++GV PD T N L++G C A++L++ M +G K D F++++LI+G
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN L M RG+ P+ T L++G C+ R D E+ M KG K D +++
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370
Query: 61 LING 64
LING
Sbjct: 371 LING 374
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M++ V PD T + L++G C + D A +L + M +G + + +
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 61 LING 64
LING
Sbjct: 336 LING 339
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M QRG+ PD T L+DG C + A E+ M +G + D + +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 61 LING 64
LI+G
Sbjct: 441 LISG 444
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + +RG+ P + N L++G+C + D+ L M D F++S+
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSV 300
Query: 61 LING 64
LING
Sbjct: 301 LING 304
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EAN +ELMIQ G DT+ N L+ C + D A ELL M G + D ++ SI
Sbjct: 271 VEEANAYSELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSI 330
Query: 61 LING 64
L+NG
Sbjct: 331 LVNG 334
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA GL M++RGV+P+T + L+D +C F A+ + M KG + ++++L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515
Query: 62 INGGSAR 68
I+G S R
Sbjct: 516 IDGYSKR 522
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L + + RG+ PD TC +L+ G C+ + D A +L M +G + +++
Sbjct: 525 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 584
Query: 61 LINGGS 66
+I+G S
Sbjct: 585 MISGLS 590
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +M ++G+ D N++ G C +R D A+ LL SM +G + S +
Sbjct: 420 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479
Query: 61 LIN 63
LI+
Sbjct: 480 LID 482
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A L M +G++ + N L+DG+C + D A L V M KG + D F+++
Sbjct: 385 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 444
Query: 61 LING 64
+ +G
Sbjct: 445 IASG 448
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A + M ++ + PD T N LM GFCL R D AR L+ M +G + D S++
Sbjct: 375 MERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNT 434
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 435 LISGYSMK 442
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A E M+QRG+ +T N LM + R A +L M G D F+++I
Sbjct: 235 LDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNI 294
Query: 61 LING 64
LING
Sbjct: 295 LING 298
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ E + L + +++G+ PD NAL++ C +RA E++ M K D +++
Sbjct: 340 VQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNT 399
Query: 61 LING 64
L+ G
Sbjct: 400 LMRG 403
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G NP T NAL+ G C + D A L+ M +KG D ++ LI G
Sbjct: 455 MMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M + G +PD T N L++G+C +A E+ M KG + A +++ LI
Sbjct: 272 DAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI 331
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +RG+ PD + N L+ G+ + A + M KG +++
Sbjct: 410 LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469
Query: 61 LING 64
LI G
Sbjct: 470 LIQG 473
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A G+ + MI G+ PD T +AL+DG+C R D L M SKG K ++ I
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618
Query: 61 LING 64
+++G
Sbjct: 619 ILHG 622
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E G+ M +RG+ PD TCN+ M C + A E SM +KG K D ++S+L+
Sbjct: 315 ETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLL 374
Query: 63 NGGSA 67
+G +A
Sbjct: 375 HGYAA 379
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + +L+I G PD T N+L+DG+ L + ++A +L +M S G + D ++S L+
Sbjct: 526 EAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALL 585
Query: 63 NG 64
+G
Sbjct: 586 DG 587
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M+Q+GV PD T ++ +D C A D+A +L M S G + D +++
Sbjct: 243 VSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNC 302
Query: 61 LINGGS 66
+I+G S
Sbjct: 303 MIHGYS 308
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD--AFSHSIL 61
MI G+ PDT N+L+ GFC+ +A+EL+ M S+G + F +SI+
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSII 515
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + MIQ V+P+ T N++++G C+ R A++ M SKGC + +++
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 61 LING 64
LI+G
Sbjct: 322 LISG 325
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L LM++ G P+ N L+DG C + A ELL M KG D +++ L+
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 63 NG 64
G
Sbjct: 219 TG 220
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A +LM +G P+ T N L+ GFC D +L M +G D F+++
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 61 LING 64
LI+G
Sbjct: 357 LIHG 360
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + M G N D T N L+ G+C + A ++ M S+ D +H I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 61 LING 64
L++G
Sbjct: 392 LLHG 395
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++R +NPD T AL+D F D A+EL M + +++ +ING
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T +L+ GFCL +R A L++ M G + + ++ LI+G
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
>gi|449464228|ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77405-like [Cucumis sativus]
gi|449518241|ref|XP_004166151.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77405-like [Cucumis sativus]
Length = 445
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L +M+ +G +PD T N+L+DG C R RA EL M +GC + +++ I
Sbjct: 272 EANHLFRIMLFKGFSPDVVTYNSLIDGCCKTYRIQRALELFEDMSKRGCTPNRLTYNSFI 331
Query: 63 NGGSA 67
SA
Sbjct: 332 RYYSA 336
>gi|302761046|ref|XP_002963945.1| hypothetical protein SELMODRAFT_82351 [Selaginella moellendorffii]
gi|300167674|gb|EFJ34278.1| hypothetical protein SELMODRAFT_82351 [Selaginella moellendorffii]
Length = 376
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L+ M++ G +P T N+L++G CL + D AR+ L M G D ++++
Sbjct: 115 VEEAFELSTTMVKNGCSPTLYTYNSLINGLCLQGKTDEARDFLQEMADSGYNPDVVTYTV 174
Query: 61 LIN 63
LIN
Sbjct: 175 LIN 177
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + ++M +RG P N L+DG C A + + A EL +M GC ++++ LI
Sbjct: 82 EALAVLDVMAERGCIPPAIVYNQLIDGLCKAGKVEEAFELSTTMVKNGCSPTLYTYNSLI 141
Query: 63 NG 64
NG
Sbjct: 142 NG 143
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E + ++G+ PDT T L+ G C R D+A L +M CK D+ ++ I
Sbjct: 286 ISEAFQVYEQLQKKGLVPDTYTYTILIGGLCDVGRTDQALSLKDTMIQNNCKPDSVTYGI 345
Query: 61 LING 64
L G
Sbjct: 346 LRAG 349
>gi|302769109|ref|XP_002967974.1| hypothetical protein SELMODRAFT_88078 [Selaginella moellendorffii]
gi|300164712|gb|EFJ31321.1| hypothetical protein SELMODRAFT_88078 [Selaginella moellendorffii]
Length = 376
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L+ M++ G +P T N+L++G CL + D AR+ L M G D ++++
Sbjct: 115 VEEAFELSTTMVKNGCSPTLYTYNSLINGLCLQGKTDEARDFLQEMADSGYNPDVVTYTV 174
Query: 61 LIN 63
LIN
Sbjct: 175 LIN 177
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + ++M +RG P N L+DG C A + + A EL +M GC ++++ LI
Sbjct: 82 EALAVLDVMAERGCIPPAIVYNQLIDGLCKAGKVEEAFELSTTMVKNGCSPTLYTYNSLI 141
Query: 63 NG 64
NG
Sbjct: 142 NG 143
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E + ++G+ PDT T L+ G C R D+A L +M CK D+ ++ I
Sbjct: 286 ISEAFQVYEQLQKKGLVPDTYTYTILIGGLCDVGRTDQALSLKDTMIQNNCKPDSVTYGI 345
Query: 61 LING 64
L G
Sbjct: 346 LRAG 349
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + MIQ V+P+ T N++++G C+ R A++ M SKGC + +++
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 61 LING 64
LI+G
Sbjct: 322 LISG 325
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + +LM+ +G PD T N L+ GFC + R + +L M +G DAF+++
Sbjct: 830 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 889
Query: 61 LING 64
LI+G
Sbjct: 890 LIHG 893
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R V P+ T N+L++GFC+ A+ + M SKGC D +++ LI
Sbjct: 797 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 856
Query: 63 NG 64
G
Sbjct: 857 TG 858
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L LM++ G P+ N L+DG C + A ELL M KG D +++ L+
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 63 NG 64
G
Sbjct: 219 TG 220
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A +LM +G P+ T N L+ GFC D +L M +G D F+++
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 61 LING 64
LI+G
Sbjct: 357 LIHG 360
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + M G N D T N L+ G+C + A ++ M S+ D +H I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 61 LING 64
L++G
Sbjct: 392 LLHG 395
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++R +NPD T AL+D F D A+EL M + +++ +ING
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T +L+ GFCL +R A L++ M G + + ++ LI+G
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T +L++GFC +RF A L+ SM G + ++ +ING
Sbjct: 665 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 718
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + E+M+ GV PD + N L++ +C R D A LL + +G + D ++H+I
Sbjct: 273 MQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTI 332
Query: 61 LING 64
+++G
Sbjct: 333 IVDG 336
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGG 65
I+ GV PD T N L+D +C D A +L M G D S + LI+G
Sbjct: 40 IRLGVLPDVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGA 93
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M G+ PD + N L+ G F ++ +L M +G DA+SH+I
Sbjct: 64 LDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNI 123
Query: 61 LIN 63
L+N
Sbjct: 124 LMN 126
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + M+QRGV P+ T AL DG C A ELL M +KG + +A +++
Sbjct: 447 MAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 506
Query: 61 LING 64
LING
Sbjct: 507 LING 510
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ L + M+ +G+ P T N LM+GFC++ R + ++LL M K +A +++
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611
Query: 61 LI 62
L+
Sbjct: 612 LM 613
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ PD T L+D C + DRA LL M KG K ++++L+NG
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNG 580
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+++ ++P+ +T N+LM +C+ + E+ M S+ + +++ILI G
Sbjct: 593 LLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKG 650
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
AN L M +G+ + T N+L++G C A ++A + M + K D ++++ LI+
Sbjct: 485 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLID 544
Query: 64 G 64
Sbjct: 545 A 545
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella
moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella
moellendorffii]
Length = 457
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D G M+ G P+T T L+ C A RF+ AR + M ++GC + FS+SIL
Sbjct: 34 DHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSIL 93
Query: 62 ING 64
I G
Sbjct: 94 IAG 96
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L MI+ GV PD + N L+DG+ + D A +L + G + DAFS+S +I
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Query: 63 N 63
+
Sbjct: 340 D 340
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G P+ T N L+DGFC A L + M S GC D S++ LI G
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRG 271
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI G P+ T +L+ G C + A +L M +GC D +++
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 163 LIDGFSKK 170
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L E M+++G P T N+L+ GF F R + L M +GC + F+ +
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 61 LING 64
L++G
Sbjct: 233 LLDG 236
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M+ RG PD N L+DGF A L M KGC F+++
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 61 LINGGSAR 68
L++G S +
Sbjct: 198 LLSGFSRK 205
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L M G PD + N L+ G C + A+ LL M G D S++I
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 61 LINGGS 66
LI+G S
Sbjct: 303 LIDGYS 308
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ RG+ PD T N ++ G C DRA E++ ++ KGC+ D S++I
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 61 LI 62
L+
Sbjct: 304 LL 305
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L +LM ++G+ PD + + L+ FC R D A E L +M S GC D +++
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 61 LI 62
++
Sbjct: 409 VL 410
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +P T N ++ GFC A R + A +L SM GC+ + ++++
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 548
Query: 61 LING 64
LI G
Sbjct: 549 LIEG 552
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L E M+++G NPD C L+ GF +A ++ + G + D F+++ LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 63 NG 64
NG
Sbjct: 166 NG 167
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
++++ PD NAL++GFC +R D A +L M SK D +++I+I +R
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M + +PDT T N ++ C + D A ++L + S C+ +++I
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 61 LI 62
LI
Sbjct: 234 LI 235
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G++P T + LM G CL D+ + A +L + KG K D H+ILI
Sbjct: 217 EAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI+ G P+T NAL+ G A + D A + MG+ D +++ILING
Sbjct: 155 MIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSPPDIVTYNILING 208
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + ELM + G D+ T L++GFC +++ ++L KG DAF++S
Sbjct: 75 VEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+IN
Sbjct: 135 MINA 138
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD T N L++G DRF A +L+ M KG ++S+L+ G
Sbjct: 197 PDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKG 243
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+D A + E +++R V+PD NA+++GF A R + EL MG +G
Sbjct: 6 IDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMGREG 55
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M+ G++PD T + L++ +C FD A+++LV M +GC + ++++LI G
Sbjct: 106 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG 161
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A G+ + M ++GV+P+ NAL+DG C + AR + S+ +KG + +++ L
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613
Query: 62 ING 64
I+G
Sbjct: 614 IDG 616
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G++P+ T + ++ G C + ++A +LL M +KG K +AF ++ LI+G
Sbjct: 322 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 371
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M+ GV P+ T + L+ G C + DRA LL M + D +++++
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298
Query: 62 ING 64
I G
Sbjct: 299 IEG 301
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A+ L + M++ PDT T N +++G A LL M + G + +++SI
Sbjct: 273 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSI 332
Query: 61 LING 64
+I+G
Sbjct: 333 MIHG 336
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G + M G+ PD T AL++G C + R + A+ LL M K + ++
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227
Query: 61 LING 64
LI+G
Sbjct: 228 LIDG 231
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ + P+ T +L++G C+ R D AR++ M +KGC D +++ LI
Sbjct: 264 DAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLI 323
Query: 63 NG 64
NG
Sbjct: 324 NG 325
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + LM +G PD +L++GFC + + A ++ M KG + +++
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356
Query: 61 LING 64
LI G
Sbjct: 357 LIQG 360
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M++ G+ PD ++D C D A L M + G + D ++
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216
Query: 61 LING 64
L+NG
Sbjct: 217 LVNG 220
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+++ G PD T +L++GFCL +R + A ++ M G K D ++ +I+
Sbjct: 132 LMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIID 184
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV+ D TCN LM+ FC + + A L + G + D F+ + LING
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLING 150
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE G+ + M + G P+ CNA+++GF A + + A +M SKGC +++
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 505 LINGLSKAER 514
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ +G P+ T + LM+G C + D A L KG K D H+I+I
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 576
Query: 63 NG 64
+G
Sbjct: 577 HG 578
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA G++P+ T N L+ C +FD+A+ELL M +G D FS+ L
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190
Query: 62 IN 63
IN
Sbjct: 191 IN 192
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G P T N L++G A+RF A L+ M KG K + ++S+L+NG
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M + GV+PD N +++G+ A R + EL M +GC+ S++I
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNI 364
Query: 61 LING 64
LI G
Sbjct: 365 LIRG 368
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE G+ + M + G P+ CNA+++GF A + + A +M SKGC +++
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 505 LINGLSKAER 514
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ +G P+ T + LM+G C + D A L KG K D H+I+I
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 576
Query: 63 NG 64
+G
Sbjct: 577 HG 578
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA G++P+ T N L+ C +FD+A+ELL M +G D FS+ L
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190
Query: 62 IN 63
IN
Sbjct: 191 IN 192
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G P T N L++G A+RF A L+ M KG K + ++S+L+NG
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M + GV+PD N +++G+ A R + EL M +GC+ S++I
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNI 364
Query: 61 LING 64
LI G
Sbjct: 365 LIRG 368
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL M++ G +P T L G C + RFD A E+L M ++GC +A ++S ++
Sbjct: 331 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390
Query: 63 NG 64
+G
Sbjct: 391 DG 392
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E MI+ G PD T + L++G C A R D EL M +GC D +++
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494
Query: 61 LIN 63
L++
Sbjct: 495 LVD 497
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
MI+ G++PD T N+++DG C R A + +GC+ + ++S LI+G S
Sbjct: 198 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 254
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M++ G +T T + ++DG R + A +L M GC DA +++
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318
Query: 61 LINGGSARIR 70
LI+G R R
Sbjct: 319 LIDGFFKRQR 328
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ + + ++RG P+ T + L+DG + D A +LL M GC+ + ++S ++
Sbjct: 226 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 285
Query: 63 NG 64
+G
Sbjct: 286 DG 287
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M+ + + PD T AL+DG R A +L +KGC +++
Sbjct: 11 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 70
Query: 61 LING 64
+I+G
Sbjct: 71 MIDG 74
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ I G P T + L+DG C D+ +LL M +GC +A +++ L+N
Sbjct: 90 DMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNA 145
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQ-RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
EA G E M + V P +AL+DG C A + D A E L M G D + SIL
Sbjct: 401 EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSIL 460
Query: 62 ING 64
ING
Sbjct: 461 ING 463
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG PD T L+D C A R D A +L M S G D + +I+G
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHG 533
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV PD + N L+DG CLA D A +LL M S G K D+FS++ L++G
Sbjct: 513 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHG 562
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ +G+ PD T N ++ G RF A+EL +SM + + + ++++I
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866
Query: 61 LING 64
++NG
Sbjct: 867 ILNG 870
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A M+ G+ P T N ++ G RF A+EL ++M + G K D ++++I
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628
Query: 61 LING 64
++NG
Sbjct: 629 ILNG 632
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M+ RG+ PD T ++DG C A FDRA + M G K + +++
Sbjct: 219 VDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNC 278
Query: 61 LING 64
LI+G
Sbjct: 279 LIHG 282
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ L E M+ G+ PD+ + N L+ G+C A R D A M S G +++
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593
Query: 61 LING 64
+++G
Sbjct: 594 ILHG 597
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD-AFSHS 59
+D+A MI GV PD ++L+ G C D++++ EL M + G + F ++
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNT 488
Query: 60 ILIN 63
IL N
Sbjct: 489 ILCN 492
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK---GCKQDAFSHSILIN 63
L + M + G PDT + N L+ G C R + A ELL M C + S+S +IN
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 64 G 64
G
Sbjct: 212 G 212
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + M Q+G++PD + AL+D C R D A M ++G D S
Sbjct: 394 IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSS 453
Query: 61 LING 64
L+ G
Sbjct: 454 LVYG 457
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M ++G++P+ + N+L+ GF AD FDRA EL M + G + ++H +
Sbjct: 369 LDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 428
Query: 61 LIN 63
IN
Sbjct: 429 FIN 431
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M RGV P+ + + A RFD A ++L M GCK D +H+++I
Sbjct: 239 MEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVI 290
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M+++G+NPD + L+D C A R + + G + D +++LI+G
Sbjct: 937 EKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDG 992
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +RG+ P T AL+DG C R A+EL + KGC D +++++
Sbjct: 376 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 435
Query: 61 LING 64
+I+G
Sbjct: 436 MISG 439
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +M + G+ P T + LMDG+CL A+++ +M G + +S++I+I
Sbjct: 238 EAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMI 297
Query: 63 NG 64
NG
Sbjct: 298 NG 299
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+ + + PDT T N+L+DG C + R A L+ M +G D +++
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365
Query: 61 LING 64
L++
Sbjct: 366 LLDA 369
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+Q GVNP+ + N +++G C R D A LL M K D +++ LI+G
Sbjct: 281 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 334
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT T N LM G CL ++ + ++G + D S+ L+NG
Sbjct: 71 ILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNG 124
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG D T +L+D C D+A L + M +G + ++++ LI+G
Sbjct: 351 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 404
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M RG+ PD T L+ GFCL + A LL M K + ++I
Sbjct: 166 VNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNI 225
Query: 61 LING 64
LIN
Sbjct: 226 LINA 229
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +ANG+ I +G PD T N L+DG+C D+A E+L +M S G D +++
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501
Query: 61 LING 64
L+NG
Sbjct: 502 LLNG 505
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M+ G+ PD T N L++G C A + D + +M KGC + +++I
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 61 LI 62
LI
Sbjct: 537 LI 538
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E ++ G+ PD + N L+ GFC + A L M + G + + F+++
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 61 LING 64
+ING
Sbjct: 327 IING 330
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M+ GV P+ T N +++GFC A A ++L KG D F++S LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 63 NG 64
NG
Sbjct: 364 NG 365
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ E+ L +++RGV P+ T N + G C D A LL S+ S+G D S++
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291
Query: 61 LING 64
LI G
Sbjct: 292 LICG 295
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++ G +PD T N +++G C A +L +KGC D F+ + LI
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468
Query: 63 NG 64
+G
Sbjct: 469 DG 470
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ PD T M FC+ R A LL +M +GC+ +A S+ +I+G
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISG 190
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+EA + M +R V PD TC+AL++G+C A R D A L + M G K D ++
Sbjct: 547 FEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNN 606
Query: 61 LING 64
LI+G
Sbjct: 607 LIHG 610
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 6 GLAELMIQR----GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+AE ++QR G+ PD T N L+DGF +A ELL M S G D +++ L
Sbjct: 443 AMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNAL 502
Query: 62 INGGSAR 68
I+ AR
Sbjct: 503 IHSLIAR 509
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + +I+RG++PD T ++DGF F+ A + M + K D + S L
Sbjct: 513 NEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSAL 572
Query: 62 ING 64
+NG
Sbjct: 573 LNG 575
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
MDEAN L M+ G+ PD N L+ GFC A + A L+ M G + +H
Sbjct: 582 MDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTH 639
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+E L M+ G+ P+ ST N L+ G C A+ELL M +KG K D +++I
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453
Query: 61 LING 64
LI+G
Sbjct: 454 LIDG 457
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + M+ + P+ T N L+DGFC + A++ M +G K + +++
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313
Query: 61 LING 64
LING
Sbjct: 314 LING 317
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L M +G+ D T N L+DG C D+ A +LL M + G K + +++
Sbjct: 429 LQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNT 488
Query: 61 LING 64
L++G
Sbjct: 489 LMDG 492
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M ++G+ P+ T N+L++G C + + A +L M G K + +++ LING
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L M G+ P+ T N LMDG+C+ + A + M + + + ++++LI
Sbjct: 467 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIK 526
Query: 64 G 64
G
Sbjct: 527 G 527
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ + LMI+RG PD T N LM G+CL + AR+L + G D +S++I
Sbjct: 304 LGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNI 363
Query: 61 LING 64
LI G
Sbjct: 364 LIIG 367
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L LM +RG+ P+ S+ N L++G+C + R D A L M + D+ +++
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503
Query: 61 LING--GSARI 69
LI+G S RI
Sbjct: 504 LIDGLCKSGRI 514
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M +R + PD+ T N L+DG C + R A EL M G D +++I
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538
Query: 61 LINGGS 66
L + S
Sbjct: 539 LFDAFS 544
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + + G+ PD + N L+ G+C +R D A L M K + ++S LI
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLI 400
Query: 63 NG--GSARI 69
+G S RI
Sbjct: 401 DGLCKSGRI 409
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L ++ RG++PD T L+ GFC ++ LL M + + ++++ILI
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295
Query: 63 NG 64
+
Sbjct: 296 DA 297
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G +P+ T N ++D C D+A EL M +G + S++ILING
Sbjct: 423 GPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++GV PD T N L++G C A++L++ M +G K D F++++LI+G
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN L M RG+ P+ T L++G C+ R D E+ M KG K D +++
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370
Query: 61 LING 64
LING
Sbjct: 371 LING 374
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M++ V PD T + L++G C + D A +L + M +G + + +
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 61 LING 64
LING
Sbjct: 336 LING 339
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M QRG+ PD T L+DG C + A E+ M +G + D + +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 61 LING 64
LI+G
Sbjct: 441 LISG 444
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + +RG+ P + N L++G+C + D+ L M D F++S+
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSV 300
Query: 61 LING 64
LING
Sbjct: 301 LING 304
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +RG+ P T AL+DG C R A+EL + KGC D +++++
Sbjct: 339 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 398
Query: 61 LING 64
+I+G
Sbjct: 399 MISG 402
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+ + + PDT T N+L+DG C + R A L+ M +G D +++
Sbjct: 269 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328
Query: 61 LING 64
L++
Sbjct: 329 LLDA 332
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+Q GVNP+ + N +++G C R D A LL M K D +++ LI+G
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 297
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L MI + +NPD T + L+D C + A+++ +M G + +S++I+IN
Sbjct: 204 AFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMIN 261
Query: 64 G 64
G
Sbjct: 262 G 262
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG D T +L+D C D+A L + M +G + ++++ LI+G
Sbjct: 314 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 367
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M R + P+ T N L+ FCLA + A LL M K D ++ SI
Sbjct: 166 VNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSI 225
Query: 61 LING 64
LI+
Sbjct: 226 LIDA 229
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G+NP T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+ Q+G D +A+++G C D+A +L M GCK +A ++ LING
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLING 173
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + D+ T L+ GFC +++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ + + + ++MIQ ++P+ T ++L+ G C+ +R D A ++L M SKGC + ++S
Sbjct: 134 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 193
Query: 61 LING 64
L NG
Sbjct: 194 LANG 197
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LMI +G P+ T + L +GF + R D +LL M +G + S +
Sbjct: 169 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 228
Query: 61 LING 64
LI G
Sbjct: 229 LIKG 232
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M++ G+ PD T ++L++GFCL++ A + M G K+D +ILI+
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILID 56
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L + M QRGV +T +CN L+ G+ A + D A + M S G + S++I
Sbjct: 204 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 263
Query: 61 LING 64
++ G
Sbjct: 264 VLAG 267
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE G+ + M + G P+ CNA+++GF A + + A +M SKGC +++
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 480 LINGLSKAER 489
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q+G P+ T + LM+G C + D A L KG K D H+I+I
Sbjct: 492 EAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 551
Query: 63 NG 64
+G
Sbjct: 552 HG 553
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G P T N L++G A+RF A L+ M KG K + ++S+L+NG
Sbjct: 465 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNG 518
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA G++P+ T N L+ C +FD+A+ELL M +G D FS+ L
Sbjct: 106 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTL 165
Query: 62 IN 63
IN
Sbjct: 166 IN 167
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M + GV+PD N +++G+ A R + EL M +GC+ S++I
Sbjct: 281 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNI 339
Query: 61 LING 64
LI G
Sbjct: 340 LIRG 343
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L +++G PD N ++ G C + + + A +L M + C + +H+
Sbjct: 525 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNT 584
Query: 61 LING 64
L+ G
Sbjct: 585 LMEG 588
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 41/63 (65%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L + +I+ G++P+ T N L+DG C + R A+E+ + +KGC+ + +++I+
Sbjct: 438 DKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIM 497
Query: 62 ING 64
I+G
Sbjct: 498 IHG 500
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + +MI+RG PD + NALM+G+CL+ A+++ M + + S+
Sbjct: 297 VSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCT 356
Query: 61 LING 64
LING
Sbjct: 357 LING 360
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+DEA GL M++ G+ D + N+++ GFC RF A +LL M +G D ++ +
Sbjct: 226 VDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFN 285
Query: 60 ILING 64
ILI+G
Sbjct: 286 ILIDG 290
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E++++ V PD T N L+DG C R A ++ M +G K D S++ L+NG
Sbjct: 268 LDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNG 325
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MDEANGL-AELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
MDEA L E+ G+ P T N L+DGFC + RA EL+ MG+KG D ++
Sbjct: 309 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYR 368
Query: 60 ILINGGS 66
ILI G S
Sbjct: 369 ILIAGLS 375
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E+ + E M+ G NPD N +M GF ++ ++ARE+ M G K D S+ IL
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192
Query: 62 ING 64
I+G
Sbjct: 193 IHG 195
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 1 MDEANGLAELMIQR--GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+DE+ + M R G P+ T + L+ G C ++A E+ SM GCK + +++
Sbjct: 202 LDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 261
Query: 59 SILING 64
+ LI G
Sbjct: 262 TTLIAG 267
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M++ G P+ T L+ G C A++ +AREL M DA +++ LI G R
Sbjct: 249 MLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 306
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M + G PD NALM G A+R D A L +M GC D SH+I
Sbjct: 486 LNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNI 545
Query: 61 LING 64
++NG
Sbjct: 546 ILNG 549
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ E M + G+ P + T + L+DG+C +R ++A LL M KG ++
Sbjct: 381 LSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 440
Query: 61 LIN 63
LIN
Sbjct: 441 LIN 443
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G+NP T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+ Q+G D +A+++G C D+A +L M GCK +A ++ LING
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLING 173
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + D+ T L+ GFC +++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
Length = 849
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ +N LA+ M+ G PD + +A MDG ++ DRA EL + ++GC+ D SH+I
Sbjct: 577 IEASNFLAD-MVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNI 635
Query: 61 LING 64
LI G
Sbjct: 636 LIKG 639
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + + RG PD + N L+ G+C A + + A L M G A S+++
Sbjct: 611 LDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNL 670
Query: 61 LIN 63
LIN
Sbjct: 671 LIN 673
>gi|226494779|ref|NP_001147294.1| transferase, transferring glycosyl groups [Zea mays]
gi|195609598|gb|ACG26629.1| transferase, transferring glycosyl groups [Zea mays]
gi|414866930|tpg|DAA45487.1| TPA: hypothetical protein ZEAMMB73_715808 [Zea mays]
Length = 546
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M+++G T +CN L+ GFC+ R A E+ M KG K D ++
Sbjct: 330 LDKARKVYDEMLEKGFKQTTVSCNILIKGFCVHGRVYDALEVFEEMSIKGIKHDVITYDT 389
Query: 61 LING 64
LING
Sbjct: 390 LING 393
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + M+ RG+ P+ +L+ +C D+AR++ M KG KQ S +ILI
Sbjct: 298 AQQMWDEMVGRGIAPNEYAYCSLVTYYCRVGDLDKARKVYDEMLEKGFKQTTVSCNILIK 357
Query: 64 G 64
G
Sbjct: 358 G 358
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M+ G++PD T + L++ +C FD A+++LV M +GC + ++++LI G
Sbjct: 233 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG 288
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A G+ + M ++GV+P+ NAL+DG C + AR + S+ +KG + +++ L
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 740
Query: 62 ING 64
I+G
Sbjct: 741 IDG 743
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M G++P+ T + ++ G C + ++A +LL M +KG K +AF ++ LI+G
Sbjct: 445 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 498
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M+ GV P+ T + L+ G C + DRA LL M + D +++++
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425
Query: 62 ING 64
I G
Sbjct: 426 IEG 428
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A+ L + M++ PDT T N +++G A LL M + G + +++SI
Sbjct: 400 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI 459
Query: 61 LING 64
+I+G
Sbjct: 460 MIHG 463
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G + M G+ PD T AL++G C + R + A+ LL M K + ++
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354
Query: 61 LING 64
LI+G
Sbjct: 355 LIDG 358
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella
moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella
moellendorffii]
Length = 457
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D G M+ G P+T T L+ C A RF+ AR + M ++GC + FS+SIL
Sbjct: 34 DHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSIL 93
Query: 62 ING 64
I G
Sbjct: 94 IAG 96
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L MI+ GV PD + N L+DG+ + D A +L + G + DAFS+S +I
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Query: 63 N 63
+
Sbjct: 340 D 340
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI G P+ T +L+ G C + A +L M +GC D +++
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 163 LIDGFSKK 170
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L E M+++G P T N+L+ GF F R + L M +GC + F+ +
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 61 LING 64
L++G
Sbjct: 233 LLDG 236
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M+ RG PD N L+DGF A L M KGC F+++
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 61 LINGGSAR 68
L++G S +
Sbjct: 198 LLSGFSRK 205
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G P+ T N L+DGFC A L + M S GC D S++ L+ G
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRG 271
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L M G PD + N LM G C + A+ LL M G D S++I
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 61 LINGGS 66
LI+G S
Sbjct: 303 LIDGYS 308
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M + G NP+ +ALM+GFC R + A+E+ M S G K D ++
Sbjct: 331 VDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTT 390
Query: 61 LIN 63
LIN
Sbjct: 391 LIN 393
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA L E M+ + + PD T NAL++GFC + DRA +++ M GC + F++S
Sbjct: 295 LKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYS 354
Query: 60 ILING 64
L+NG
Sbjct: 355 ALMNG 359
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M G+ PDT L++ FC A R D A ELL M C+ D + ++
Sbjct: 366 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNV 425
Query: 61 LING 64
++ G
Sbjct: 426 ILGG 429
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + DT T N ++ G C RF+ A +L + +G + S+ I
Sbjct: 401 VDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRI 460
Query: 61 LIN 63
++N
Sbjct: 461 VLN 463
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M +G PD T ++++G C + D+A+++L M GCK + S++
Sbjct: 424 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 483
Query: 61 LING 64
L+NG
Sbjct: 484 LLNG 487
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A E M + P+ T N L+ G+C R + A EL+ M KGC D S+
Sbjct: 283 LDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYT 342
Query: 61 LI 62
++
Sbjct: 343 VM 344
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA +R D +A++ FC R D+A+E++ M SKGC D +++ +
Sbjct: 390 DEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSV 449
Query: 62 ING 64
ING
Sbjct: 450 ING 452
>gi|224131366|ref|XP_002328521.1| predicted protein [Populus trichocarpa]
gi|222838236|gb|EEE76601.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N + E M + G P+ T NA+M G+CL ++ D A+++L M KG S++IL NG
Sbjct: 26 NCVFETMTEEGAEPNVYTYNAVMGGYCLNNQMDEAQKVLDIMVGKGYAPAVHSYNILTNG 85
Query: 65 GSARIR 70
R R
Sbjct: 86 NCKRRR 91
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + ++M+ +G P + N L +G C R D A+ LL M K D ++S
Sbjct: 57 MDEAQKVLDIMVGKGYAPAVHSYNILTNGNCKRRRLDEAKRLLSKMSEKELTPDTVTYST 116
Query: 61 LING 64
L+ G
Sbjct: 117 LMQG 120
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M ++ + PDT T + LM GFC R A L M S G + +
Sbjct: 92 LDEAKRLLSKMSEKELTPDTVTYSTLMQGFCQVGRPQEALNLFNEMCSSGLLPNLMTCLK 151
Query: 61 LING 64
L++G
Sbjct: 152 LLDG 155
>gi|302143887|emb|CBI22748.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A GL E M +G P+ T N+++ G C+A++F+ AR +L M S+GC + ++
Sbjct: 419 LEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNT 478
Query: 61 LI 62
L+
Sbjct: 479 LV 480
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A GL M+ G+ P+ T AL+DG+C ++ D A LL M GC+ + ++++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 61 LING 64
LI+G
Sbjct: 571 LIHG 574
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L MI G+ P TC + C ++ A L V M +KGC+ + ++++
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 61 LING 64
LI+G
Sbjct: 361 LISG 364
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + + + ++PDT T +++ G C D A ++ M +GC+ + ++S LI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292
Query: 63 NG 64
NG
Sbjct: 293 NG 294
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L ++MI+ G+ P+ T A++DG C A E+ M +GC + ++S LI
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+QRG + + T N ++ G+C + A +L M GCK D +S++ LI G
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
>gi|225470179|ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Vitis vinifera]
Length = 514
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A GL E M +G P+ T N+++ G C+A++F+ AR +L M S+GC + ++
Sbjct: 415 LEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNT 474
Query: 61 LI 62
L+
Sbjct: 475 LV 476
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ + + M G+ PD + + L+DGFC R D+A E+ M + G + +S+SI
Sbjct: 296 LDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSI 355
Query: 61 LING 64
LI+G
Sbjct: 356 LIDG 359
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ + + M G+ P+ + + L+DGFC R D+A E+ M + G D +S+SI
Sbjct: 331 VDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSI 390
Query: 61 LING 64
LI+G
Sbjct: 391 LIDG 394
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L + M + V PD +L+ GFC RAR L M +GC + +++
Sbjct: 576 MDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTC 635
Query: 61 LIN 63
IN
Sbjct: 636 FIN 638
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSI 60
++A+ L E M +RGV PD L+ FC +RA L M +G C + ++
Sbjct: 647 NQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTC 706
Query: 61 LIN 63
LIN
Sbjct: 707 LIN 709
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 6 GLAELMIQ---RGVNPDTSTC-NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
G+A +IQ R P + C NA++ G C D A E+ M + G D +S+SIL
Sbjct: 262 GVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSIL 321
Query: 62 ING 64
I+G
Sbjct: 322 IDG 324
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M G+ PD + + L+DGFC D A + M S AF++
Sbjct: 366 VDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCS 425
Query: 61 LING 64
LI G
Sbjct: 426 LIKG 429
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+++GV P T N ++ G RF A+EL ++M + G K D ++++I
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 61 LING 64
++NG
Sbjct: 625 ILNG 628
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L MI RG+ PD T ++DG C A FDRA + M G K + ++++
Sbjct: 215 VDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNC 274
Query: 61 LING 64
LI+G
Sbjct: 275 LIHG 278
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D+A MI GV P+ N+L+ G C D+++RA EL+ M +G C F ++
Sbjct: 425 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 484
Query: 60 ILIN 63
++ N
Sbjct: 485 LICN 488
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M+ G++P T N L+ G+C A R D A L M KG +++ +
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 590
Query: 62 ING 64
++G
Sbjct: 591 LHG 593
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L +LM GV PD + L+ G+CL R D A ++ M S G +++ L+
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 556
Query: 63 NG 64
+G
Sbjct: 557 HG 558
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + E M RG+ PD T +L++ C R AR SM KG K ++ ILI
Sbjct: 287 EVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILI 346
Query: 63 NGGSAR 68
+G + +
Sbjct: 347 HGYATK 352
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS---KGCKQDAFSHSILIN 63
L + M + G PDT + L+ G C R + A ELL M + C + S+SI+IN
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207
Query: 64 G 64
G
Sbjct: 208 G 208
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A GL M+ G+ P+ T AL+DG+C ++ D A LL M GC+ + ++++
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740
Query: 61 LING 64
LI+G
Sbjct: 741 LIHG 744
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L MI G+ P TC + C ++ A L V M +KGC+ + ++++
Sbjct: 471 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 530
Query: 61 LING 64
LI+G
Sbjct: 531 LISG 534
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + + + ++PDT T +++ G C D A ++ M +GC+ + ++S LI
Sbjct: 403 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 462
Query: 63 NG 64
NG
Sbjct: 463 NG 464
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L ++MI+ G+ P+ T A++DG C A E+ M +GC + ++S LI
Sbjct: 754 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 812
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+QRG + + T N ++ G+C + A +L M GCK D +S++ LI G
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L ++M+++G P+ ST N L+ GFC + + + LL M +G K D +++I
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483
Query: 61 LING 64
LI+
Sbjct: 484 LISA 487
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M++ V+P++ T N L+DGFC + A ++ M S+G K +++
Sbjct: 284 MYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNS 343
Query: 61 LING 64
L+NG
Sbjct: 344 LVNG 347
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ + P+ T NAL++G+C + AREL ++G +G + + +
Sbjct: 354 LNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNT 413
Query: 61 LING 64
L++G
Sbjct: 414 LLHG 417
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+E L M RGV DT T N L+ +C +A L+ M KG K +++I
Sbjct: 459 MEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNI 518
Query: 61 LING 64
L+NG
Sbjct: 519 LLNG 522
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M +G+ P T N+L++G C + + A+ LL M S K + +++ LING
Sbjct: 327 EEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALING 382
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A GL M+ G+ P+ T AL+DG+C ++ D A LL M GC+ + ++++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 61 LING 64
LI+G
Sbjct: 571 LIHG 574
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L MI G+ P TC + C ++ A L V M +KGC+ + ++++
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 61 LING 64
LI+G
Sbjct: 361 LISG 364
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + + + ++PDT T +++ G C D A ++ M +GC+ + ++S LI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292
Query: 63 NG 64
NG
Sbjct: 293 NG 294
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L ++MI+ G+ P+ T A++DG C A E+ M +GC + ++S LI
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+QRG + + T N ++ G+C + A +L M GCK D +S++ LI G
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +M + GV P+ + N LMDG+CL A+++ +M KG + +S++I+I
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297
Query: 63 N 63
+
Sbjct: 298 D 298
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +RG+ P+ T AL+DG C R A++L + KGC+ + +++++
Sbjct: 376 LDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNV 435
Query: 61 LING 64
+I+G
Sbjct: 436 MISG 439
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL MI + +NP+ T LMD C + A+ LL M +G K + S++ L+
Sbjct: 203 EAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLM 262
Query: 63 NG 64
+G
Sbjct: 263 DG 264
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A + M+Q+GVNP+ + N ++D C + R D A LL + K + ++S
Sbjct: 271 VQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSS 330
Query: 61 LING 64
LI+G
Sbjct: 331 LIDG 334
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L ++ + + P+T T ++L+DGFC R A +LL M +G D +++
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 61 LING 64
L++
Sbjct: 366 LLDA 369
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG D T +L+D C D+A L + M +G + + ++++ LI+G
Sbjct: 347 LLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDG 404
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M RG+ P+ T + L+ GFCLA + A LL M K + ++++I
Sbjct: 166 VNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTI 225
Query: 61 LING 64
L++
Sbjct: 226 LMDA 229
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G P+T T N LM G CL ++ + ++G + D S++ L+NG
Sbjct: 71 ILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNG 124
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A GL M+ G+ P+ T AL+DG+C ++ D A LL M GC+ + ++++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 61 LING 64
LI+G
Sbjct: 571 LIHG 574
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L MI G+ P TC + C ++ A L V M +KGC+ + ++++
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 61 LING 64
LI+G
Sbjct: 361 LISG 364
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + + + ++PDT T +++ G C D A ++ M +GC+ + ++S LI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292
Query: 63 NG 64
NG
Sbjct: 293 NG 294
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L ++MI+ G+ P+ T A++DG C A E+ M +GC + ++S LI
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+QRG + + T N ++ G+C + A +L M GCK D +S++ LI G
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M ++G+NPD + CN ++D C R A E+ M +GC+ D +++ LI
Sbjct: 313 MWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLI 364
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M RG D +T N L+ FC +R ++ ELL M KG + ++S ++
Sbjct: 348 MNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYIL 399
>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 376
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G+NP T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + MI+ G P+ N L++G A +F+ A + MG C +++
Sbjct: 145 LDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGXVRCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + D+ T L+ GFC +++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEMAZXKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+++GV P T N ++ G RF A+EL ++M + G K D ++++I
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559
Query: 61 LING 64
++NG
Sbjct: 560 ILNG 563
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D+A MI GV P+ N+L+ G C D+++RA EL+ M +G C F ++
Sbjct: 360 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 419
Query: 60 ILIN 63
++ N
Sbjct: 420 LICN 423
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L +LM GV PD + L+ G+CLA R D A ++ M S G +++ L+
Sbjct: 432 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 491
Query: 63 NG 64
+G
Sbjct: 492 HG 493
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M+ G++P T N L+ G+C A R D A L M KG +++ +
Sbjct: 466 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 525
Query: 62 ING 64
++G
Sbjct: 526 LHG 528
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS---KGCKQDAFSHSILIN 63
L + M + G PDT + + L+ GFC +R + A ELL M + + C + +++ +I+
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215
Query: 64 G 64
G
Sbjct: 216 G 216
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
R P+ T ++DG C A FDRA + M G K + +++ LI+G
Sbjct: 201 RSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHG 251
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + +M+++ V P+ T N+LM+G+CL + ++A + +M G D S+SI+I
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356
Query: 63 NG 64
+G
Sbjct: 357 SG 358
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A GL MI +NP T + L+D FC + A+ + V M K K + +++
Sbjct: 260 LKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNS 319
Query: 61 LING 64
L+NG
Sbjct: 320 LMNG 323
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG P+ T N+L+D C D+A ELL + + +++ILING
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILING 463
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + + PD T N+L+DG C + R A +L+ M +G + +++
Sbjct: 365 VDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNS 424
Query: 61 LING 64
L++
Sbjct: 425 LLDA 428
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M Q GV PD + + ++ GFC D A +L M K D +++
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS 389
Query: 61 LING--GSARI 69
LI+G S RI
Sbjct: 390 LIDGLCKSGRI 400
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M ++G+NPD + CN ++D C R A E+ M +GC+ D +++ LI
Sbjct: 293 MWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLI 344
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M RG D +T N L+ FC +R ++ ELL M KG + ++S ++
Sbjct: 328 MNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYIL 379
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA +++ M +G+ PD T N+LM C + AR++ SM KG K D FS+ I++
Sbjct: 304 EAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIML 363
Query: 63 NGGSAR 68
NG + +
Sbjct: 364 NGYATK 369
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+QRG++PD ST N +++ C A D+A +L M KG D ++++
Sbjct: 232 VNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNS 291
Query: 61 LINGGSA 67
LI G S+
Sbjct: 292 LIYGYSS 298
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + I G++P+ N LMDG+CL + + A + M S G + + + L+
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573
Query: 63 NG 64
NG
Sbjct: 574 NG 575
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A MI +GV P ST + L+ GFC +A++L++ M +KG + D +
Sbjct: 442 MDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNF 501
Query: 61 LIN 63
+IN
Sbjct: 502 IIN 504
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A + ++M+ G+ P+ L++G+C R D L + KG K ++I
Sbjct: 547 MENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNI 606
Query: 61 LING 64
+++G
Sbjct: 607 ILHG 610
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L ++ +G+ P T+ N ++ G A R A+ M G D +++SI
Sbjct: 582 IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSI 641
Query: 61 LING 64
++ G
Sbjct: 642 VLGG 645
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
+MI++ V PD TC++L+DG+ L + ++AR + +M G D S++I+ING S
Sbjct: 196 VMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLS 252
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G P+ T N L+DG C R A+E+ + KG + D ++++ING
Sbjct: 340 KGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMING 390
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT T L+ G C+ + +A + +KG + D S+ LING
Sbjct: 36 ILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLING 89
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ +G+ P+ +T NAL++G C + DRAR L + KG + +++I
Sbjct: 608 VNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNI 667
Query: 61 LING----GSAR 68
LI+G GS R
Sbjct: 668 LIDGYCKSGSPR 679
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L LM+QRGV P+ L+DG F RA L + ++G + ++ + +ING
Sbjct: 299 LWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMING 356
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ RG+N N +++G C D A+E M GCK D ++ L +G
Sbjct: 338 ILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDG 391
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ PD TC +++ +C A + +RA E + M G + +A S++ L++G
Sbjct: 62 IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDG 110
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G+ + CN+L++G+C + LL+ M K D++S+ L++G
Sbjct: 198 MLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDG 251
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + + +G+ P+ T N L+DG+C + A +L M +G ++S
Sbjct: 643 LDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSS 702
Query: 61 LING 64
LING
Sbjct: 703 LING 706
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M++ G++P T ++L++GFC + A +LL M + Q + S L+
Sbjct: 680 EALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLV 739
Query: 63 NG 64
G
Sbjct: 740 EG 741
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M ++G+NPD + CN ++D C R A E+ M +GC+ D +++ LI
Sbjct: 313 MWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLI 364
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M RG D +T N L+ FC +R ++ ELL M KG + ++S ++
Sbjct: 348 MNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYIL 399
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADR---FDRARELLVSMGSKGCKQDAFS 57
++E+ L M+ +GV P+ N L+D C + AR+L +SM SKGC+ + S
Sbjct: 214 LEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEIS 273
Query: 58 HSILING 64
++ILING
Sbjct: 274 YTILING 280
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRAR---ELLVSMGSKGCKQDAFSHSILING 64
Q G+ P+ TCN ++ GFC ++ D+A E + M GC D +++ L+ G
Sbjct: 404 QEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRG 458
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 4 ANGLAEL--MIQRGVNPDTSTCNALMDGF---CLADRFDRARELLVSMGSKGCKQDAFSH 58
+ GLA + +++RG PD T N L+ G C D A+E+ M ++G + S+
Sbjct: 142 SEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISY 201
Query: 59 SILING 64
S L++G
Sbjct: 202 SSLVHG 207
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M ++G++P+ + N+L+ GF AD FDRA EL M + G + ++H +
Sbjct: 362 VDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 421
Query: 61 LIN 63
IN
Sbjct: 422 FIN 424
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M RGV P+ + + A RFD A +L M GCK D +H+++I
Sbjct: 232 MEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVII 283
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+++G+NPD + L+D C A R + + G + D +++LI+G
Sbjct: 928 LFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDG 985
>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
Length = 461
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G ++M GV PD TCN LMD C R AR++ SM G K D ++
Sbjct: 278 LTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCT 337
Query: 61 LINGGSAR 68
L+ G + +
Sbjct: 338 LLQGYATK 345
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV P+ T N+++ G+C + + A L M S G + D + ++
Sbjct: 243 MDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNL 302
Query: 61 LIN 63
L++
Sbjct: 303 LMD 305
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSHSILING 64
M Q G P+ +C L+ G C +R A ELL M G C D ++ +ING
Sbjct: 146 MTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVING 201
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M +G+ PD T ++++ C A D+A E+L +M G + +++ +
Sbjct: 209 DKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSI 268
Query: 62 ING 64
++G
Sbjct: 269 VHG 271
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L +M+++GV P+ T A+MDG+CL ++ ++A + M +G + + + ++I+I
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259
Query: 63 NG 64
NG
Sbjct: 260 NG 261
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + +M+Q GV P+ N +++G C R D A L M K D +++I
Sbjct: 233 VNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNI 292
Query: 61 LING 64
LI+G
Sbjct: 293 LIDG 296
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + +NPD T N L+DG C + + EL+ M S G D +++
Sbjct: 268 VDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNS 327
Query: 61 LING 64
L++
Sbjct: 328 LLHA 331
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + +G+ P+ T L+DG C R + A + + ++G +++++
Sbjct: 338 LDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNV 397
Query: 61 LING 64
+ING
Sbjct: 398 MING 401
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MI +G+ P+ T + L+D C + +A LL M KG K + ++ ++
Sbjct: 165 DAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM 224
Query: 63 NG 64
+G
Sbjct: 225 DG 226
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+A L + M++ G+ PD T AL+ C + R D+ARE+ +SM GC D+++ S+
Sbjct: 632 KAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLF 690
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A+ + + RG++P+ T N L+ GFC D+A+ELL + + D F+ +
Sbjct: 490 MDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNS 549
Query: 61 LING 64
LI+G
Sbjct: 550 LIDG 553
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L M G+ PDT + NAL+ G+ +RF +A +L SM G + D +++ LI
Sbjct: 601 LLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALI 656
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+NP T NA+MD ++ D A M S C D F+++ILI+G
Sbjct: 224 GLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHG 273
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L E++++ PD T N+L+DG C A + + A M + +++I
Sbjct: 525 MDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNI 584
Query: 61 LI 62
LI
Sbjct: 585 LI 586
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A G M++ V P+ T N L+ FC R+ LL M G + D FS + L
Sbjct: 561 ENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNAL 620
Query: 62 INGGSARIR 70
I G + + R
Sbjct: 621 IQGYTGKNR 629
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+A L + M++ G+ PD T AL+ C + R D+ARE+ +SM GC D+++ S+
Sbjct: 623 KAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLF 681
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A+ + + RG++P+ T N L+ GFC D+A+ELL + + D F+ +
Sbjct: 481 MDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNS 540
Query: 61 LING 64
LI+G
Sbjct: 541 LIDG 544
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L M G+ PDT + NAL+ G+ +RF +A +L SM G + D +++ LI
Sbjct: 592 LLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALI 647
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+NP T NA+MD ++ D A M S C D F+++ILI+G
Sbjct: 224 GLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHG 273
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L E++++ PD T N+L+DG C A + + A M + +++I
Sbjct: 516 MDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNI 575
Query: 61 LI 62
LI
Sbjct: 576 LI 577
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A G M++ V P+ T N L+ FC R+ LL M G + D FS + L
Sbjct: 552 ENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNAL 611
Query: 62 INGGSARIR 70
I G + + R
Sbjct: 612 IQGYTGKNR 620
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Z+G+NP T + LM G CL + + A +L + SKG K D H+ILI
Sbjct: 217 EAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + MI+ G P+ NAL++G A +F+ A ++ MG+ C ++S
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYST 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC +++ +L KG DAF++S
Sbjct: 75 VDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIAERKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+ ++G D +A+++G C + D+A +L M GCK +A ++ LING
Sbjct: 118 EIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALING 173
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + + PD T N+L+DG C +RA L M +G + D +S++I
Sbjct: 353 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTI 412
Query: 61 LING 64
L++G
Sbjct: 413 LLDG 416
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L +M++ + PD T N+L+DG+ L D A+ + SM +G D ++
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342
Query: 61 LING 64
+ING
Sbjct: 343 MING 346
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M ++G+ PD + L+DG C + R + A+E+ + +KG + ++++
Sbjct: 388 LERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTV 447
Query: 61 LIN 63
LIN
Sbjct: 448 LIN 450
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRGV PD +++G C D A L M K D +++ LI+G
Sbjct: 328 MAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDG 381
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
MI +G++PD T L+ GFC+ A LL M K + + +ILI+ S
Sbjct: 223 MIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALS 278
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M + +NP+ T N L+D + A+ LL M K D F+++
Sbjct: 248 LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNS 307
Query: 61 LING 64
LI+G
Sbjct: 308 LIDG 311
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + ++ +G + + L++ C A FD A +L M KGC DA + I
Sbjct: 423 LEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDI 482
Query: 61 LI 62
+I
Sbjct: 483 II 484
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T +++++G C R D A ++ SMGSK + + + LI
Sbjct: 321 EAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLI 380
Query: 63 NG 64
G
Sbjct: 381 TG 382
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +P+ T N L+ G+C A D EL MG +G +A ++
Sbjct: 354 LDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYIT 413
Query: 61 LING 64
LI G
Sbjct: 414 LIRG 417
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-----------GSK 49
++ A L + MI GV P+ TCN L+DG C + + A E+ +M
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 298 GVEPDVQTYNILISG 312
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M +G+ PD T + +++GFC + ++ A+ LL M + D + S LI
Sbjct: 170 DAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLI 229
Query: 63 NG 64
N
Sbjct: 230 NA 231
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M RG+ PDT T +++++G C R D A ++ SMGSK + + + LI
Sbjct: 321 EAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLI 380
Query: 63 NG 64
G
Sbjct: 381 TG 382
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M + +P+ T N L+ G+C A D EL MG +G +A ++
Sbjct: 354 LDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYIT 413
Query: 61 LING 64
LI G
Sbjct: 414 LIRG 417
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-----------GSK 49
++ A L + MI GV P+ TCN L+DG C + + A E+ +M
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 50 GCKQDAFSHSILING 64
G + D +++ILI+G
Sbjct: 298 GVEPDVQTYNILISG 312
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M +G+ PD T + +++GFC + ++ A+ LL M + D + S LI
Sbjct: 170 DAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLI 229
Query: 63 NG 64
N
Sbjct: 230 NA 231
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M + G NPD T N+++DG C D A ELL ++ S GCK D + +
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482
Query: 61 LING 64
L+ G
Sbjct: 483 LLKG 486
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M + G PD T ++++DG C R D A ELL + S GCK D +++
Sbjct: 318 VDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 377
Query: 61 LING 64
++ G
Sbjct: 378 VLKG 381
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG +P T + L+D C A + +A LL M +KGC+ D ++++LIN
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + G PD T N L+ G C DR++ A +L+V+M C DA + +
Sbjct: 458 IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNT 517
Query: 61 LING 64
+I
Sbjct: 518 VITS 521
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDA-FSHS 59
M+EA L +M+ G++PDT T +L G C D DRA +L + G DA F +
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYND 655
Query: 60 ILI 62
IL+
Sbjct: 656 ILL 658
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N L++ C D A +L + S GCK DA +++ ++
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274
Query: 63 NG--GSARIRK 71
GS R ++
Sbjct: 275 KSLCGSERWKE 285
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M++RG PD T +++GFC D A LL SM + GCK + S++I
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 61 LING 64
++ G
Sbjct: 443 VLKG 446
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + M G+ P+ N L+ G C A+R++ ELL M K C D + +I
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 61 LIN 63
L++
Sbjct: 373 LVD 375
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E L M + D T N L+D FC DR ELL M +GC D +++ +
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTV 408
Query: 62 ING 64
ING
Sbjct: 409 ING 411
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A+R+ A +L+ M +GC + + +
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 477
Query: 61 LIN 63
LIN
Sbjct: 478 LIN 480
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G + T N L++ C ++A ELL M GC D S+S +I
Sbjct: 455 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514
Query: 63 NG 64
+G
Sbjct: 515 DG 516
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M++ P+ T N L+ C F+R E+L M GC D ++ +I+G
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 306
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + G PD + NA++ G C+A R+ +EL+ M C + + +
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 61 LIN 63
LI+
Sbjct: 268 LIS 270
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD ++DG C + A E+L M S G K + ++ L+ G
Sbjct: 288 MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 341
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + M ++ + PD T N LM G CL R D AR L+ M +G + D S++
Sbjct: 375 MDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 435 LISGYSMK 442
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RGV+ +T N + + R A L+ MG KG DAF+++ILING
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILING 298
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL E M +RG+ PD + N L+ G+ + A ++ M KG +++
Sbjct: 410 LDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNA 469
Query: 61 LING 64
+I G
Sbjct: 470 MIKG 473
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L E M ++G+ PD T N L++G+C + +A ++ M KG + +++ LI
Sbjct: 272 EAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLI 331
Query: 63 NGGSAR 68
+ S +
Sbjct: 332 HALSMK 337
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ E + L ++RG+ PD NAL++ C DRA E++ M K D +++
Sbjct: 340 VQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNT 399
Query: 61 LING 64
L+ G
Sbjct: 400 LMRG 403
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M GV PD N L+ GF ADRF+ A EL M + C +A S++
Sbjct: 207 LDEAKHVLARMKAAGVAPDVVVFNTLLAGFVAADRFEDAFELAREMERRDCPPNAVSYTT 266
Query: 61 LINGGSARIR 70
L+ G +R R
Sbjct: 267 LMQGLGSRGR 276
>gi|326507622|dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L E M++RGV+P+ T + LM G C A R D A++L+ M +GC+ +A ++ +L++
Sbjct: 215 AEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMFDMEYQGCQTEAVNYGVLMS 274
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E MI G PD T N LM G C AR+L+ M +GC+ + +++IL+NG
Sbjct: 377 LNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNG 434
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E MI G+ DT +CN +++G C + D A E L ++G D +++ ++NG
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNG 644
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M RG+ ++ N L+ C ++ A LL M +KGCK D F+++
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500
Query: 61 LING 64
LI G
Sbjct: 501 LIYG 504
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
I RG PD T N++++G C R A L + +G + DAF+++ I+
Sbjct: 627 INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L+E M +G PD T N+L+ G C DR D A L +M G + +++ LI+
Sbjct: 481 NLLSE-MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M+ RG PD T L+ G C + + AR++L+ + C +A ++
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI---PCPNNAILNT- 359
Query: 61 LING 64
LING
Sbjct: 360 LING 363
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG D T N L+ FC ++ EL M G D S +I+ING
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMING 609
>gi|242078465|ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
gi|241940351|gb|EES13496.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
Length = 824
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL + M+ +G+ PD AL++G+C +A +LL M G K D + S+
Sbjct: 750 LDEARGLFDEMLAKGLTPDVYAYTALINGYCSQGEIAKAEDLLQEMTDNGMKPDVLTFSV 809
Query: 61 L 61
L
Sbjct: 810 L 810
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ PD + L+DG C + D AR L M +KG D ++++ LING
Sbjct: 730 IEPDVTCYTVLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALING 778
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L M+ G+ PD L++G+CL + A ++ M K D +++I
Sbjct: 420 MNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNI 479
Query: 61 LINGGS 66
L +G S
Sbjct: 480 LASGYS 485
>gi|255561709|ref|XP_002521864.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538902|gb|EEF40500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 428
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDE + L MI G PD ST LM+G CLA + D A +L MG+KG D +++
Sbjct: 214 MDECSKLLGHMINSGCLPDVSTYKELMEGMCLAGKIDEAYRVLQEMGNKGYPPDIVTYNC 273
Query: 61 LI 62
+
Sbjct: 274 FL 275
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E MI G PD T N LM G C AR+L+ M +GC+ + +++IL+NG
Sbjct: 377 LNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNG 434
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E MI G+ DT +CN +++G C + D A E L ++G D +++ ++NG
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNG 644
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M RG+ ++ N L+ C ++ A LL M +KGCK D F+++
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500
Query: 61 LING 64
LI G
Sbjct: 501 LIYG 504
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
I RG PD T N++++G C R A L + +G + DAF+++ I+
Sbjct: 627 INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L+E M +G PD T N+L+ G C DR D A L +M G + +++ LI+
Sbjct: 481 NLLSE-MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M+ RG PD T L+ G C + + AR++L+ + C +A ++
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI---PCPNNAILNT- 359
Query: 61 LING 64
LING
Sbjct: 360 LING 363
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG D T N L+ FC ++ EL M G D S +I+ING
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMING 609
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ L + M GV D T N LMDG C A R A +LL M + GC D ++S
Sbjct: 168 LEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227
Query: 61 LING 64
+ G
Sbjct: 228 FVYG 231
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E M + G PD T ++L++G C A + + A E + M +GCK +A ++ L+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370
Query: 63 NG 64
+G
Sbjct: 371 HG 372
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P ST NAL+ G C A R D A + M S+GC D S+S ++ G
Sbjct: 401 PSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQ--DAFSHSILING 64
L E M RG+ P+ + N L++G C +R+ A EL+ M S+G + D ++S L++G
Sbjct: 32 LLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSG 91
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 3 EANGLAELMIQRG--VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
EA L MI RG PD T + L+ G+C A + + +RELL + S+G + DA ++
Sbjct: 63 EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ ++DG C R AR ++ +M GC+ D ++S L+NG
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + M+QRGV P+ T AL DG C A ELL M +KG + +A +++
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509
Query: 61 LING 64
LING
Sbjct: 510 LING 513
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ L + M+ G+ P T N LM+GFC++ R + ++LL M K +A +++
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614
Query: 61 LI 62
L+
Sbjct: 615 LM 616
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A M G+ PD T L+D C + DRA +LL M G K ++++
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579
Query: 61 LING 64
L+NG
Sbjct: 580 LMNG 583
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
AN L M +G+ + T N+L++G C A D+A + M + G K D ++++ LI+
Sbjct: 488 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLID 547
Query: 64 G 64
Sbjct: 548 A 548
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+++ ++P+ +T N+LM +C+ + E+ M S+ + + +++ILI G
Sbjct: 596 LLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653
>gi|414878622|tpg|DAA55753.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 573
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA GL + M+ +G+ PD T AL++G+C +A +L M +KG K D S S+
Sbjct: 502 LEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDVLSFSV 561
Query: 61 L 61
L
Sbjct: 562 L 562
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ PD + L+DG C A+ + AR L M +KG D +++ LING
Sbjct: 482 IEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALING 530
>gi|242075674|ref|XP_002447773.1| hypothetical protein SORBIDRAFT_06g015370 [Sorghum bicolor]
gi|241938956|gb|EES12101.1| hypothetical protein SORBIDRAFT_06g015370 [Sorghum bicolor]
Length = 380
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G+ + M++ G+ P + A++ G+C R A L+ +M GC D S+S+
Sbjct: 165 LDEAWGVLDSMLEEGICPTVRSYTAILHGYCKQGRVLEAERLVDTMIQVGCAPDVISYSV 224
Query: 61 LING 64
LI G
Sbjct: 225 LIQG 228
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MIQ G PD + + L+ G C F + +L +KG +A +++I +
Sbjct: 202 EAERLVDTMIQVGCAPDVISYSVLIQGLCRVGEFGKVERILGESEAKGWTPNAVTYNIYM 261
Query: 63 NG 64
+
Sbjct: 262 SA 263
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
EA L E + N D N LM C A F R +LLV + KG D FS +I
Sbjct: 305 FSEAVSLLEYSEELNWNVDVFCYNTLMSRLCDAGDFARVLKLLVDLVKKGIGPDMFSFTI 364
Query: 61 LI----NGGSARIRK 71
I G ++R+
Sbjct: 365 AIRSLCRAGKFKVRR 379
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ + M++ G +PD T N +++G+C A + A +++ MG KG K D F+ +
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNT 461
Query: 61 LIN 63
L++
Sbjct: 462 LLH 464
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L E M RGV + T N ++ FC + D A ++V M G D F+++ +
Sbjct: 368 DAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTM 427
Query: 62 ING 64
ING
Sbjct: 428 ING 430
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADR-FDRARELLVSMGSKGCKQDAFSHS 59
+DEA L + M + PD T N L+DG C R D A +L+ M ++G K++ +H+
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHN 390
Query: 60 ILI 62
I+I
Sbjct: 391 IMI 393
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + ELM +G+ PD T N ++ G C + D A L M S D +++
Sbjct: 297 LKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNT 356
Query: 61 LING 64
LI+G
Sbjct: 357 LIDG 360
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M++ + PD TCN L+ G C ++ L + SKG D +++I+I+
Sbjct: 587 MVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIIS 639
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A ++++G+ PD ST N ++ G+C ++A + M K D F+ +IL
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602
Query: 62 ING 64
+ G
Sbjct: 603 LRG 605
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
++ GV P+ +T N L+ G+C + + A L+ MG GC D +++ ++ R
Sbjct: 203 VKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKR 259
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L M + G PD T N ++ C + + R+LL+ M + G + +++IL
Sbjct: 228 EEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNIL 287
Query: 62 ING 64
++G
Sbjct: 288 VHG 290
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + MI++G+ P TCN ++ G+C + +A E L M S+G D+ +++
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575
Query: 61 LING 64
LING
Sbjct: 576 LING 579
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L +M Q+ + PD T N L+DGFC ++A EL M S+ + S++I
Sbjct: 446 MGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAI 505
Query: 61 LING 64
L+NG
Sbjct: 506 LVNG 509
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI GV PD+ T N L++GF + D+A L+ M +KG + D ++++++NG
Sbjct: 561 MISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNG 614
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L M +G+ PD T N +++GFC R A +L M +G D +++
Sbjct: 586 MDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTT 645
Query: 61 LING 64
LING
Sbjct: 646 LING 649
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +AN L + M++RGV PD T L+ G C +A L M K K D +++I
Sbjct: 411 LADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNI 470
Query: 61 LING 64
LI+G
Sbjct: 471 LIDG 474
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q+G+ D T N L++ +C A E++ SM KG K F+++ +ING
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVING 264
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ M+ G++PDT+T N L+ C + F A+++ M +G D S S LI
Sbjct: 274 AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI- 332
Query: 64 GGSAR 68
G S+R
Sbjct: 333 GVSSR 337
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M+Q+GV PD T N+++D C A D+A +L M KG + D +++
Sbjct: 280 VSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTA 339
Query: 61 LINGGS 66
+I+G S
Sbjct: 340 IIHGYS 345
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A G+ + M+ G+ PD T N L+ G+C + + D L M K K ++SI
Sbjct: 596 MEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSI 655
Query: 61 LING 64
+++G
Sbjct: 656 VLDG 659
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ + L+I G P T N+L+DG+CL + ++A +L +M S G + D +++ L+
Sbjct: 563 DAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLV 622
Query: 63 NG 64
+G
Sbjct: 623 SG 624
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ + M +G+ P T N+ M C R A E+ M +KG D S+SIL+
Sbjct: 352 ESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILL 411
Query: 63 NG 64
+G
Sbjct: 412 HG 413
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M G++PD+ T +L+ G C+AD D A L MG KG Q++ +++++I
Sbjct: 503 EARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 562
Query: 63 NGGS 66
+G S
Sbjct: 563 SGLS 566
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ + ++M ++G D TCN + F R+D A++ L M G + S++
Sbjct: 396 IDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTN 455
Query: 61 LIN 63
LI+
Sbjct: 456 LID 458
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M + V P+ T N ++ +C + AR+L +M + G D+++++
Sbjct: 466 VEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTS 525
Query: 61 LING 64
LI+G
Sbjct: 526 LIHG 529
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA M++ GV T + L+D +C + A+ L V M SK + +A +++++
Sbjct: 432 DEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVM 491
Query: 62 I 62
I
Sbjct: 492 I 492
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ M+ RG PD +T N L+ C +R + A +L + KG D ++ +I
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396
Query: 61 LING 64
LIN
Sbjct: 397 LINA 400
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M G PD T N L+D C + +A +LL M S GC + +++ +I+G
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 67 ARIR 70
++R
Sbjct: 473 KKMR 476
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA + +GV+PD T N L++ C A L M + GC D +++
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 61 LIN 63
LI+
Sbjct: 432 LID 434
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + I G PD T N ++G C D A +++ M +G D F+++I
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 61 LIN 63
++N
Sbjct: 327 VVN 329
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG+ PD T N LM C A + A +L M S+G D + + L+ G
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 225
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M RGV PD +T LM GF + A + M GC + ++LING
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
++M+Q G +PD T N +++ C + + A+ +L M +GC D + + LI
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ + ++MIQ + PD T N+LMDG CL + + +M KGC S++ LI
Sbjct: 282 KAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLI 341
Query: 63 NG 64
NG
Sbjct: 342 NG 343
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L +++ ++PD + +MDG C A + AR+L + SKG D +++I
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479
Query: 61 LING 64
+ING
Sbjct: 480 MING 483
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A GL E M Q+G+ PDT T N L+ G C R A L M G D ++ I
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409
Query: 61 LIN 63
L +
Sbjct: 410 LFD 412
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G P T+T L+ G C+ + A +L M +G + D ++ LING
Sbjct: 115 ILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLING 168
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + +G++PD T +++G C A +L M GC +A ++++
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514
Query: 61 LING 64
+ G
Sbjct: 515 ITRG 518
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ M+ RG PD +T N L+ C +R + A +L + KG D ++ +I
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396
Query: 61 LING 64
LIN
Sbjct: 397 LINA 400
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M G PD T N L+D C + +A +LL M S GC + +++ +I+G
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 67 ARIR 70
++R
Sbjct: 473 KKMR 476
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA + +GV+PD T N L++ C A L M + GC D +++
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 61 LIN 63
LI+
Sbjct: 432 LID 434
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + I G PD T N ++G C D A +++ M +G D F+++I
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 61 LIN 63
++N
Sbjct: 327 VVN 329
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG+ PD T N LM C A + A +L M S+G D + + L+ G
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 225
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M RGV PD +T LM GF + A + M GC + ++LING
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
++M+Q G +PD T N +++ C + + A+ +L M +GC D + + LI
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ M+ RG PD +T N L+ C +R + A +L + KG D ++ +I
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396
Query: 61 LING 64
LIN
Sbjct: 397 LINA 400
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M G PD T N L+D C + +A +LL M S GC + +++ +I+G
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 67 ARIR 70
++R
Sbjct: 473 KKMR 476
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA + +GV+PD T N L++ C A L M + GC D +++
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 61 LIN 63
LI+
Sbjct: 432 LID 434
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + I G PD T N ++G C D A +++ M +G D F+++I
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 61 LIN 63
++N
Sbjct: 327 VVN 329
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG+ PD T N LM C A + A +L M S+G D + + L+ G
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQG 225
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M RGV PD +T LM GF + A + M GC + ++LING
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
++M+Q G +PD T N +++ C + + A+ +L M +GC D + + LI
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L M+Q G+ P+ T AL DG C D A ELL M KG + + ++++
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503
Query: 61 LING 64
L+NG
Sbjct: 504 LVNG 507
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L + M+++G+ P+ +T N+L+ +C+ + E+ M +KG D +++I
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643
Query: 61 LING 64
LI G
Sbjct: 644 LIKG 647
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D AN L M ++G+ + T N+L++G C A D+A +L+ M G DA +++
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538
Query: 61 LING 64
L++
Sbjct: 539 LMDA 542
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M G +PD T LMD +C + RA ELL M + + + ++
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 573
Query: 61 LING 64
L+NG
Sbjct: 574 LMNG 577
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A+ L M+ R + P T N LM+GFC++ + +LL M KG +A +++
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 608
Query: 61 LI 62
LI
Sbjct: 609 LI 610
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV +T++ N + C R A +LL+ M +GC D S+S +ING
Sbjct: 248 GVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVING 297
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + +LM+ +G PD T N L+ GFC + R + +L M +G DAF+++
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 61 LING 64
LI+G
Sbjct: 365 LIHG 368
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R V P+ T N+L++GFC+ A+ + M SKGC D +++ LI
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 63 NG 64
G
Sbjct: 332 TG 333
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T +L++GFC +RF A L+ SM G + ++ +ING
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 193
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M G++PD+ T +L+ G C+AD D A L MG KG Q++ ++++
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 61 LINGGS 66
+I+G S
Sbjct: 580 MISGLS 585
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ + ++M Q+G D TCN + F R+D A++ L M G K S++
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 61 LIN 63
LI+
Sbjct: 475 LID 477
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M +GV P+ T N ++ +C + AR+L +M + G D+++++
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 61 LING 64
LI+G
Sbjct: 545 LIHG 548
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA M++ GV T + L+D +C + A+ L V M SKG + +A +++++
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 62 I 62
I
Sbjct: 511 I 511
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ M+ RG PD +T N L+ C +R + A +L + KG D ++ +I
Sbjct: 245 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 304
Query: 61 LING 64
LIN
Sbjct: 305 LINA 308
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M G PD T N L+D C + +A +LL M S GC + +++ +I+G
Sbjct: 321 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 380
Query: 67 ARIR 70
++R
Sbjct: 381 KKMR 384
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA + +GV+PD T N L++ C A L M + GC D +++
Sbjct: 280 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 339
Query: 61 LIN 63
LI+
Sbjct: 340 LID 342
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + I G PD T N ++G C D A +++ M +G D F+++I
Sbjct: 175 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 234
Query: 61 LIN 63
++N
Sbjct: 235 VVN 237
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG+ PD T N LM C A + A +L M S+G D + + L+ G
Sbjct: 83 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 133
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M RGV PD +T LM GF + A + M GC + ++LING
Sbjct: 111 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+ ++M+Q G +PD T N +++ C + + A+ +L M +GC D + + LI
Sbjct: 216 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 271
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSA 67
MI R +P+ T + ++DG C +D+ D A++LL M S+GC+ D +++ L+ G SA
Sbjct: 178 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA 234
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ G PD L+ GF A R D A LL M S+GC D ++++
Sbjct: 203 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 262
Query: 61 LIN 63
+I+
Sbjct: 263 VID 265
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
G P+ T NAL+DG C DR D AR ++ + D +++ L+
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M + G +PD T LM+GFC R D A +LL M KG + + +
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTS 235
Query: 61 LING 64
L++G
Sbjct: 236 LMDG 239
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M ++G+ P+ T +LMDG C +R A +L M K C ++++
Sbjct: 211 LDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 270
Query: 61 LING 64
+++G
Sbjct: 271 ILDG 274
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA L MI+ G P+T T N+L+ GFC + D A LL M G D +++
Sbjct: 140 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 199
Query: 60 ILING 64
L+NG
Sbjct: 200 TLMNG 204
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ G PD T L+ GFC + + D A + + ++G + D ++S LI
Sbjct: 72 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 131
Query: 63 NG 64
+G
Sbjct: 132 DG 133
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P T N+L+ G C A+R A +LL M GC D F+++ LI G
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 98
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSI 60
D+A + E ++ RG PD T + L+DG C R A +L M G C + +++
Sbjct: 106 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 165
Query: 61 LING 64
LI+G
Sbjct: 166 LISG 169
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMI-QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
EA L E MI +RG++PD N +++GFC + +RA+ +L M GC + +++S L
Sbjct: 251 EAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSAL 310
Query: 62 ING 64
+NG
Sbjct: 311 MNG 313
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + M + G NP+ +ALM+GFC + A+++ + G K D ++
Sbjct: 285 VERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTT 344
Query: 61 LIN 63
L+N
Sbjct: 345 LMN 347
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G+ M+ RG PDT+T N L+ +R + A +L + KG D ++ +I
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412
Query: 61 LING 64
LIN
Sbjct: 413 LINA 416
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA + +G++PD T N L++ C L M S GC D +++I
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447
Query: 61 LIN 63
LI+
Sbjct: 448 LID 450
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M G PD T N L+D C + A +LL M S GC + +++ +I+
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488
Query: 67 ARIR 70
++R
Sbjct: 489 KKMR 492
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M +G++ T N L+DG C A R D A EL+ M +G + + +++
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552
Query: 61 LIN 63
++
Sbjct: 553 ILT 555
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M GV PD +T LM GF + A + M GC + ++LING
Sbjct: 219 MLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M + G PD NALM G A D A+ LL +M GC D SH+I
Sbjct: 496 LSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNI 555
Query: 61 LING 64
++NG
Sbjct: 556 ILNG 559
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M + G +PD ++ N +++G DRA E+ M S K DA S++
Sbjct: 531 IDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNT 590
Query: 61 LI 62
++
Sbjct: 591 VL 592
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA E M G+ P + T + L+DGFC +R ++A LL M KG ++ LI
Sbjct: 393 EAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLI 452
Query: 63 N 63
N
Sbjct: 453 N 453
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L +M++ PD T AL++G C DR A L M +GC D +H++
Sbjct: 197 LHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 256
Query: 61 LIN 63
L++
Sbjct: 257 LVS 259
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M+++G+ PD N L+DGFC A+R D A +++ M G + +++ L+
Sbjct: 345 MLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLV 396
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A GL +LM R +P + ++++G C + D+A +L M GCK D +++ L
Sbjct: 128 ETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 187
Query: 62 INGGSARIR 70
I+G + R
Sbjct: 188 IHGLCVKQR 196
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M G PD T N L+ G C+ R A++LL M + D + +
Sbjct: 162 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTA 221
Query: 61 LING 64
LI G
Sbjct: 222 LIEG 225
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P T L+D FC +F+ A LL M S+ C +S+ +ING
Sbjct: 106 GITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 155
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M Q G+ P+ T N L+ C + + ELL +M S+G + D + S
Sbjct: 370 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWST 429
Query: 61 LING 64
L+ G
Sbjct: 430 LVAG 433
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA MIQR VNP+ T N+L++G C+ D A+++L + SKG +A +++ LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 63 NG 64
NG
Sbjct: 332 NG 333
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +++ +G P+ T N L++G+C A R D ++L M G D F+++
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 61 LING 64
L G
Sbjct: 365 LYQG 368
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ + +M + GV+ DT T N L G+C A +F A ++L M S G D ++ +I
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 61 LING 64
L++G
Sbjct: 400 LLDG 403
>gi|255569678|ref|XP_002525804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534891|gb|EEF36578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 135
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRAR 40
+ EA G+ E+ I+RG+ PD T N+LMD +CL ++ +RAR
Sbjct: 96 VSEAEGIVEVTIERGIEPDVVTYNSLMDRYCLHNQMNRAR 135
>gi|125529279|gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indica Group]
Length = 573
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M G PD T + L+ G C A+RFD AR+ L M ++GC D + ++L
Sbjct: 331 DEAAEIVKRMKGEGHQPDNITYSQLIFGLCKANRFDEARKALDEMEAEGCVPDLKTWTML 390
Query: 62 INGGSA 67
I G A
Sbjct: 391 IQGHCA 396
>gi|115442501|ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group]
gi|15289974|dbj|BAB63669.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
gi|113535061|dbj|BAF07444.1| Os01g0970900 [Oryza sativa Japonica Group]
gi|125573469|gb|EAZ14984.1| hypothetical protein OsJ_04919 [Oryza sativa Japonica Group]
gi|215678751|dbj|BAG95188.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215693250|dbj|BAG88632.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 573
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M G PD T + L+ G C A+RFD AR+ L M ++GC D + ++L
Sbjct: 331 DEAAEIVKRMKGEGHQPDNITYSQLIFGLCKANRFDEARKALDEMEAEGCVPDLKTWTML 390
Query: 62 INGGSA 67
I G A
Sbjct: 391 IQGHCA 396
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSA 67
MI R +P+ T + ++DG C +D+ D A++LL M S+GC+ D +++ L+ G SA
Sbjct: 228 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA 284
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ G PD L+ GF A R D A LL M S+GC D ++++
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312
Query: 61 LIN 63
+I+
Sbjct: 313 VID 315
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
G P+ T NAL+DG C DR D AR ++ + D +++ L+
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLM 174
>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G+ + M + V D T N+LM G L AR+L M +KGCK + FS++I
Sbjct: 234 VSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNI 293
Query: 61 LING 64
LING
Sbjct: 294 LING 297
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L MI +G+ P+ + N GFC + A+EL +M + G D ++SI
Sbjct: 304 IDEAKQLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELNENMHTNGNLPDLCTYSI 361
Query: 61 LING 64
L++G
Sbjct: 362 LLDG 365
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A + ++M+ GV+PD T N+L++G C +F+ E +M KGC + F+ +I
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 61 LI 62
L+
Sbjct: 537 LL 538
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 61 LING 64
L+NG
Sbjct: 502 LLNG 505
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 469 HGYSTQLK 476
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+DEA GL E M + VNPD T L+DGFC D A L M
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + M RG+ PD + M FC R A LL +M S+GC+ + ++ +
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 62 ING 64
+ G
Sbjct: 188 VGG 190
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + +I++G PD T N L+ G C +F A L M ++G + D+++++
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 61 LING 64
LI G
Sbjct: 327 LIAG 330
>gi|13620171|emb|CAC36392.1| hypothetical protein [Capsella rubella]
Length = 150
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M ++G P+ T N+L+ GFC+A +F A LL M S+GC + +S
Sbjct: 51 LEKAEEMFKEMTEKGQLPNVFTYNSLIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYST 110
Query: 61 LIN 63
L+N
Sbjct: 111 LVN 113
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV PD + N L+DG CLA D A +LL M S G K ++FS++ L++G
Sbjct: 165 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHG 214
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ L E M+ G+ P++ + N L+ G+C A R D A L M S G +++
Sbjct: 186 IDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNT 245
Query: 61 LING 64
+++G
Sbjct: 246 ILHG 249
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M+ G+ P T N ++ G RF A+EL ++M + G K ++++
Sbjct: 221 IDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNT 280
Query: 61 LING 64
++NG
Sbjct: 281 ILNG 284
>gi|147789026|emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
Length = 993
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E M+ +G NP+ N+L+DG+C + A LL+ + ++ K D F+ S LI
Sbjct: 727 DAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALI 786
Query: 63 NG 64
NG
Sbjct: 787 NG 788
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D GL E M +RG++P T N++++G C A R A E+ SKG DA + S
Sbjct: 279 IDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEV-----SKGIAGDAVTFST 333
Query: 61 LING 64
L++G
Sbjct: 334 LLHG 337
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G E M + G+ P+ T A+M GFC + D A L + + G + D F +
Sbjct: 209 VEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVT 268
Query: 61 LINGGSAR 68
LI+G R
Sbjct: 269 LIDGFCTR 276
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ L + M GV D T N LMDG C A R A +LL M + GC D ++S
Sbjct: 168 LEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227
Query: 61 LING 64
+ G
Sbjct: 228 FVYG 231
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E M + G PD T ++L++G C A + + A E + M +GCK +A ++ L+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370
Query: 63 NG 64
+G
Sbjct: 371 HG 372
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P ST NAL+ G C A R D A + M S+GC D S+S ++ G
Sbjct: 401 PSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 EANGLAELMIQRG--VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
EA L MI RG PD T + L+ G+C A + + +RELL + S+G + DA ++
Sbjct: 63 EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 61 LI 62
++
Sbjct: 123 VV 124
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQ--DAFSHSILING 64
L E M R + P+ + N L++G C +R+ A EL+ M S+G + D ++S L++G
Sbjct: 32 LLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSG 91
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ ++DG C R AR ++ +M GC+ D ++S L+NG
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA+GL + M ++G P+ T N L+DG+C ++A E+ M KG + + + S
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 61 LING 64
LI+G
Sbjct: 444 LIDG 447
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + M ++G+ P+ T + L+DG+C A + + A L M KG D +++
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478
Query: 61 LING 64
LI+G
Sbjct: 479 LIDG 482
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G+ P+ T L+DG C D AR+ L+ M S G + F ++ LI+G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + M G+ P+ T N +MDG+C +A EL M G + + I
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303
Query: 61 LING 64
LI+G
Sbjct: 304 LIDG 307
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + + + PD T + L+ G C DR + A LL M KG +A +++
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 61 LING 64
LI+G
Sbjct: 409 LIDG 412
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M GV P+ N L+DG+C A A L + D F++SILI G
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L M+Q G+ P+ T AL DG C D A ELL M KG + + ++++
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403
Query: 61 LING 64
L+NG
Sbjct: 404 LVNG 407
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L + M+++G+ P+ +T N+L+ +C+ + E+ M +KG D +++I
Sbjct: 484 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 543
Query: 61 LING 64
LI G
Sbjct: 544 LIKG 547
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D AN L M ++G+ + T N+L++G C A D+A +L+ M G DA +++
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438
Query: 61 LING 64
L++
Sbjct: 439 LMDA 442
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M G +PD T LMD +C + RA ELL M + + + ++
Sbjct: 414 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 473
Query: 61 LING 64
L+NG
Sbjct: 474 LMNG 477
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A+ L M+ R + P T N LM+GFC++ + +LL M KG +A +++
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508
Query: 61 LI 62
LI
Sbjct: 509 LI 510
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L E M++RGV P+ T + LM G C A R D A++++ M +GC+ +A ++ +L++
Sbjct: 213 AERLREEMVRRGVTPNAVTYSLLMRGLCDAGRHDDAKKMMFDMEYQGCQTEAVNYGVLMS 272
Query: 64 G 64
Sbjct: 273 A 273
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + + Q+GVNP+ AL+DG+C A + D A +L M SK C ++ + +
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 61 LING 64
LI+G
Sbjct: 573 LIHG 576
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M + G+ P+ T L+D C +F++ARELL M KG + +++ LI
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 63 NGGSAR 68
NG R
Sbjct: 401 NGYCKR 406
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A G+ M++R V PD T N+L+DG C + FD A LL M +G D ++++ +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 63 N 63
+
Sbjct: 505 D 505
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EAN +++ G++PD T +L+ G+C D A ++ M KGC+++ +++
Sbjct: 234 VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 61 LING 64
LI+G
Sbjct: 294 LIHG 297
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L LM RG+ PD T +++D C + R + A +L S+ KG + ++ L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 62 ING 64
I+G
Sbjct: 539 IDG 541
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + M+ G PD T + +C R A +++ M G D F++S L
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 62 ING 64
I G
Sbjct: 679 IKG 681
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P+ T + L+DG C A+R +A ELL SM ++GC D +++IL++G
Sbjct: 110 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 157
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE+ L + G+ PD T ++++ G C ++R D A LL+ + S+GC D +S
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328
Query: 61 LING 64
LI+G
Sbjct: 329 LIDG 332
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ L M++ G P T T N+L+ G C + D A EL+ M C A +++I
Sbjct: 374 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 433
Query: 61 LING 64
LI+G
Sbjct: 434 LIHG 437
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + RG PD + L+DG C A + D A +L M GC D ++S
Sbjct: 304 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYST 363
Query: 61 LING 64
LI+G
Sbjct: 364 LIDG 367
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E+M G + D T + L+DG C A R D A LL M G +++
Sbjct: 339 VDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNS 398
Query: 61 LING 64
LI G
Sbjct: 399 LIKG 402
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M G P+ T N+L+DG C + DRA+EL M S C +++ L++G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDG 54
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI +G PD N L++G C AD+ D + LL S G K D ++S +I G
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L E M RG +PD T L+DG C + A E+L M GC + +++
Sbjct: 129 VSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNS 188
Query: 61 LING 64
L++G
Sbjct: 189 LLHG 192
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G P+ T N+L+ G C A R A L+ M +GC + ++ LI+G
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 227
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M RG P+ T L+DG C R A +L M KG D +++
Sbjct: 199 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 258
Query: 61 LING 64
LING
Sbjct: 259 LING 262
>gi|295828228|gb|ADG37783.1| AT1G06270-like protein [Capsella grandiflora]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 50 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 98
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA +++I GV PD + N L+DG+C + D + + L M S G + D+++++ L+
Sbjct: 498 EAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557
Query: 63 NG 64
NG
Sbjct: 558 NG 559
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M +GV PDT T N ++ G+C + + A LL M G + D ++S+
Sbjct: 251 MDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310
Query: 61 LIN 63
LI
Sbjct: 311 LIQ 313
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ +G+ PD T N+L+DG C A D+A +L M KG D +++I
Sbjct: 216 VDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNI 275
Query: 61 LING 64
+I G
Sbjct: 276 MIRG 279
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LA MI RG++PD N +MD C R A++ + G K D S++ LI+G
Sbjct: 467 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDG 524
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG---CKQDAFSHSILING 64
M + G PD + NAL+ G C+ + A ELL+ M + G C + S++ +I+G
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDG 209
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G+ PD T + L+ +C R AR + SM KG K ++ + I
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345
Query: 61 LINGGSAR 68
L++G + +
Sbjct: 346 LLHGYATK 353
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDE+ + M+ G+ PD+ T N+L++G+ R + A L M K K A + +I
Sbjct: 531 MDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 590
Query: 61 LING 64
+++G
Sbjct: 591 MLHG 594
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + +M++ GV P+ T ++LMDG+CL ++ ++A+ +L ++ G +A S+ +IN
Sbjct: 297 AKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMIN 356
Query: 64 G 64
G
Sbjct: 357 G 357
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + +G+ PD T N L+ G C R A+++ + SKG +A++++I
Sbjct: 434 VDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNI 493
Query: 61 LING 64
++NG
Sbjct: 494 MVNG 497
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA GL M+ + +NPD T N L+D C A+ +LV M +G + ++S
Sbjct: 259 LEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSS 318
Query: 61 LING 64
L++G
Sbjct: 319 LMDG 322
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +G+ PD T N+L+DG C + R A EL+ M G + F+++
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 61 LING 64
LI+
Sbjct: 424 LIDA 427
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MI + ++PD T +AL+ GFC+ + + A L M K D ++ +IL+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285
Query: 63 NG 64
+
Sbjct: 286 DA 287
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A + +++ G PDT T N L+ G CL + A + + G D FS+
Sbjct: 119 MNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGT 178
Query: 61 LING 64
LING
Sbjct: 179 LING 182
>gi|295828230|gb|ADG37784.1| AT1G06270-like protein [Capsella grandiflora]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 50 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 98
>gi|295828224|gb|ADG37781.1| AT1G06270-like protein [Capsella grandiflora]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 50 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 98
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + +MI++GV+ + T N+LMDG+ L + ++A + +M +G D S+SI
Sbjct: 290 MKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSI 349
Query: 61 LING 64
+ING
Sbjct: 350 MING 353
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M+ + + PD T N L+DG C +AR +L M +G + +++
Sbjct: 255 LKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNS 314
Query: 61 LING 64
L++G
Sbjct: 315 LMDG 318
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RGV PD + + +++G C D A L M SK + +++ LI+G
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + P+T T N+L+DG R A +L+ M ++G D ++S
Sbjct: 360 VDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSS 419
Query: 61 LING 64
L++
Sbjct: 420 LLDA 423
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M RG D T ++L+D C + D+A L+ + +G + + ++++I
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454
Query: 61 LING 64
L++G
Sbjct: 455 LVDG 458
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + ++ +G + D N +++G C FD A L+ M GC DA ++
Sbjct: 465 LKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYET 524
Query: 61 LI 62
L+
Sbjct: 525 LV 526
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M Q+G+ P + N+L+ GF ADRF+RA EL M G + ++H +
Sbjct: 362 VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421
Query: 61 LIN 63
IN
Sbjct: 422 FIN 424
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN--GGSARI 69
GV+ T + NAL+ G D D A EL M GC D F++ ++++ G S RI
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 817
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+++G+NPD + ++D C R + + G + D ++++LI+G
Sbjct: 928 LFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHG 985
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P+ T + L+DG C A+R +A ELL SM ++GC D +++IL++G
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 235
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE+ L + G+ PD T ++++ G C ++R D A LL+ + S+GC D +S
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 406
Query: 61 LING 64
LI+G
Sbjct: 407 LIDG 410
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ L M++ G P T T N+L+ G C + D A EL+ M C A +++I
Sbjct: 452 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 511
Query: 61 LING 64
LI+G
Sbjct: 512 LIHG 515
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + RG PD + L+DG C A + D A +L M GC D ++S
Sbjct: 382 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYST 441
Query: 61 LING 64
LI+G
Sbjct: 442 LIDG 445
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + M G P+ T N+L+DG C + DRA+EL M S C +++
Sbjct: 95 LDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNT 154
Query: 61 LING 64
L++G
Sbjct: 155 LLDG 158
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E+M G + D T + L+DG C A R D A LL M G +++
Sbjct: 417 VDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNS 476
Query: 61 LING 64
LI G
Sbjct: 477 LIKG 480
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI +G PD N L++G C AD+ D + LL S G K D ++S +I G
Sbjct: 322 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 375
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L E M RG +PD T L+DG C + A E+L M GC + +++
Sbjct: 207 VSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNS 266
Query: 61 LING 64
L++G
Sbjct: 267 LLHG 270
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G P+ T N+L+ G C A R A L+ M +GC + ++ LI+G
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M RG P+ T L+DG C R A +L M KG D +++
Sbjct: 277 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 336
Query: 61 LING 64
LING
Sbjct: 337 LING 340
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD T AL+ GFC D+A+ M SK + F SILI+G
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDG 53
>gi|224137548|ref|XP_002322585.1| predicted protein [Populus trichocarpa]
gi|222867215|gb|EEF04346.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M RG+ P+T++ N L+ G R A+EL M ++GC D ++SI
Sbjct: 26 IDEAKQLFDEMSFRGLIPNTASYNTLISGLFQVGRILEAKELFKDMHAQGCSPDLVTYSI 85
Query: 61 LINGGSAR 68
L++G S +
Sbjct: 86 LLDGLSKQ 93
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 5 NGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+GL++ +Q +NPD N L+D C + + + AREL + + KG D S + +I+
Sbjct: 88 DGLSKQEMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIIS 147
Query: 64 G 64
G
Sbjct: 148 G 148
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G P+ + N L++G C A R D A++L M +G + S++ LI+G
Sbjct: 1 MHVQGCMPNVLSYNILINGSCKALRIDEAKQLFDEMSFRGLIPNTASYNTLISG 54
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M Q+G+ P + N+L+ GF ADRF+RA EL M G + ++H +
Sbjct: 362 VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421
Query: 61 LIN 63
IN
Sbjct: 422 FIN 424
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN--GGSARI 69
GV+ T + NAL+ G D D A EL M GC D F++ ++++ G S RI
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 817
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+++G+NPD + ++D C R + + G + D ++++LI+G
Sbjct: 928 LFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHG 985
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ L E MI +G PD+ N L+DG + R D A L M GC Q ++++I
Sbjct: 451 VDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTI 510
Query: 61 LING 64
LI+G
Sbjct: 511 LIDG 514
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA ++G+ + +L+DGF A D+++EL M +KG D++ +++
Sbjct: 416 LDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNV 475
Query: 61 LING 64
LI+G
Sbjct: 476 LIDG 479
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + MI +G+ P + L G CL+ +F RA +L + G + +H +
Sbjct: 522 EEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPET-AHEDM 580
Query: 62 IN 63
IN
Sbjct: 581 IN 582
>gi|255660994|gb|ACU25666.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 376
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G+NP T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC +++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+ Q+G D +A+++G C FD+A +L M GCK +A ++ LING
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLING 173
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + MI+ G P+ N L++G A +F+ A + MG+ C +++ L
Sbjct: 146 DKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASKFEDAIIVFREMGTMHCSPTIITYNTL 205
Query: 62 ING 64
ING
Sbjct: 206 ING 208
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA+GL + M ++G P+ T N L+DG+C ++A E+ M KG + + + S
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 61 LING 64
LI+G
Sbjct: 444 LIDG 447
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + M ++G+ P+ T + L+DG+C A + + A L M KG D +++
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478
Query: 61 LING 64
LI+G
Sbjct: 479 LIDG 482
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M+ G+ P+ T L+DG C D AR+ L+ M S G + F ++
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 61 LING 64
LI+G
Sbjct: 339 LIDG 342
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + M G+ P+ T N +MDG+C +A EL M G + + I
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 61 LING 64
LI+G
Sbjct: 304 LIDG 307
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + + + PD T + L+ G C DR + A LL M KG +A +++
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 61 LING 64
LI+G
Sbjct: 409 LIDG 412
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M GV P+ N L+DG+C A A L + D F++SILI G
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
>gi|356543880|ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like [Glycine max]
Length = 342
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 4 ANGLAELMIQR---GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ +A +++Q G +PD TCN L+ C D+ + A ++L MG GC D+ S+
Sbjct: 151 SHSVANILLQMQSIGYHPDCGTCNYLLSSLCAVDQLEEAVKVLRGMGGAGCIPDSSSYGA 210
Query: 61 LINGGSARIRK 71
+I G R+RK
Sbjct: 211 VI-GAMCRVRK 220
>gi|295828234|gb|ADG37786.1| AT1G06270-like protein [Capsella grandiflora]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 50 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 98
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ L E MI +G PD+ N L+DG + R D A L M GC Q ++++I
Sbjct: 448 VDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTI 507
Query: 61 LING 64
LI+G
Sbjct: 508 LIDG 511
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA ++G+ + +L+DGF A D+++EL M +KG D++ +++
Sbjct: 413 LDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNV 472
Query: 61 LING 64
LI+G
Sbjct: 473 LIDG 476
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + MI +G+ P + L G CL+ +F RA +L + G + +H +
Sbjct: 519 EEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPET-AHEDM 577
Query: 62 IN 63
IN
Sbjct: 578 IN 579
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M +G PD T ++++G C + D+A+++L M GCK + S++
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420
Query: 61 LING 64
L+NG
Sbjct: 421 LLNG 424
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA +R D +A++ FC R D+A+E++ M SKGC D +++ +
Sbjct: 327 DEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSV 386
Query: 62 ING 64
ING
Sbjct: 387 ING 389
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+D+A E M + P+ T N L+ G+C R + A EL+ M KGC D S+
Sbjct: 220 LDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISY 277
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M +G PD T ++++G C + D+A+++L M GCK + S++
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420
Query: 61 LING 64
L+NG
Sbjct: 421 LLNG 424
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA +R D +A++ FC R D+A+E++ M SKGC D +++ +
Sbjct: 327 DEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSV 386
Query: 62 ING 64
ING
Sbjct: 387 ING 389
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+D+A E M + P+ T N L+ G+C R + A EL+ M KGC D S+
Sbjct: 220 LDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISY 277
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ L E MI +G PD+ N L+DG + R D A L M GC Q ++++I
Sbjct: 497 VDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTI 556
Query: 61 LING 64
LI+G
Sbjct: 557 LIDG 560
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA ++G+ + +L+DGF A D+++EL M +KG D++ +++
Sbjct: 462 LDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNV 521
Query: 61 LING 64
LI+G
Sbjct: 522 LIDG 525
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + MI +G+ P + L G CL+ +F RA +L + G + +H +
Sbjct: 568 EEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPET-AHEDM 626
Query: 62 IN 63
IN
Sbjct: 627 IN 628
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV P+ T N++M G C A + DRA + L M SKGCK S++ILI G
Sbjct: 291 GVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E+M+ RG PD T N ++ C + D A ELL + SKGC +++
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231
Query: 61 LINGGS 66
+I+G S
Sbjct: 232 VIDGLS 237
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M RG PD T N L++G C R D A + L SM S G + + +H+I++
Sbjct: 34 QAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIIL 93
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ PD T L++ C +A +LL MGS+GCK D ++++L+NG
Sbjct: 8 LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M G P++ + N L+ GFC + DRA + L M S+GC D +++ ++
Sbjct: 143 ILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTA 200
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + +G +P T N ++DG + D+A ELL M KG K D ++S
Sbjct: 207 VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSS 266
Query: 61 LINGGS 66
LI G S
Sbjct: 267 LIAGLS 272
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA M G P+ T N ++ C R+ A +LL M KGC + +I
Sbjct: 67 LDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNI 126
Query: 61 LIN 63
LIN
Sbjct: 127 LIN 129
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ L E MI +G PD+ N L+DG + R D A L M GC Q ++++I
Sbjct: 452 VDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTI 511
Query: 61 LING 64
LI+G
Sbjct: 512 LIDG 515
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA ++G+ + +L+DGF A D+++EL M +KG D++ +++
Sbjct: 417 LDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNV 476
Query: 61 LING 64
LI+G
Sbjct: 477 LIDG 480
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + MI +G+ P + L G CL+ +F RA +L + G + +H +
Sbjct: 523 EEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPET-AHEDM 581
Query: 62 IN 63
IN
Sbjct: 582 IN 583
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A+ M+QRG++ D LM+G+C A R A +L V M + G K D ++++
Sbjct: 743 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 802
Query: 61 LING 64
L++G
Sbjct: 803 LLDG 806
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q+G+ PD AL++G+C +A +LL M KG + D + S+L
Sbjct: 866 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL- 924
Query: 63 NGGSARIRK 71
N S R RK
Sbjct: 925 NQSSLRSRK 933
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L M + PD L+DG C A+ AREL M KG DA++++ LING
Sbjct: 833 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 892
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + E M++ + PD T N L GFC + +LL M +G + ++ ++ I
Sbjct: 568 MQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGI 627
Query: 61 LING 64
I G
Sbjct: 628 AIVG 631
>gi|345288407|gb|AEN80695.1| AT1G06270-like protein, partial [Capsella rubella]
gi|345288409|gb|AEN80696.1| AT1G06270-like protein, partial [Capsella rubella]
gi|345288411|gb|AEN80697.1| AT1G06270-like protein, partial [Capsella rubella]
gi|345288413|gb|AEN80698.1| AT1G06270-like protein, partial [Capsella rubella]
gi|345288415|gb|AEN80699.1| AT1G06270-like protein, partial [Capsella rubella]
gi|345288417|gb|AEN80700.1| AT1G06270-like protein, partial [Capsella rubella]
gi|345288419|gb|AEN80701.1| AT1G06270-like protein, partial [Capsella rubella]
gi|345288421|gb|AEN80702.1| AT1G06270-like protein, partial [Capsella rubella]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 50 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 98
>gi|295828236|gb|ADG37787.1| AT1G06270-like protein [Neslia paniculata]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 50 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 98
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ M++RG PD +T N L+ C +R + A +L + KG D ++ +I
Sbjct: 341 LEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNI 400
Query: 61 LING 64
LIN
Sbjct: 401 LINA 404
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M G PD T N L+D C + +A +LL M S GC + +++ +I+G
Sbjct: 417 LFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC 476
Query: 67 ARIR 70
++R
Sbjct: 477 KKMR 480
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA + +G++PD T N L++ C A L M S GC D +++
Sbjct: 376 LEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNT 435
Query: 61 LIN 63
LI+
Sbjct: 436 LID 438
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG+ PD T N LM C A + A +L M S G D + + L+ G
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQG 229
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + I G PD T N ++G C A +++ M +G D F+++I
Sbjct: 271 VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNI 330
Query: 61 LIN 63
++N
Sbjct: 331 VVN 333
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
++M+Q G +PD T N +++ C + + A+ +L M +GC D + + LI
Sbjct: 314 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M +G++ + T N L+DG C R D A +L+ M S+G + + +++
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNS 540
Query: 61 LIN 63
++
Sbjct: 541 ILT 543
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA+GL + M ++G P+ T N L+DG+C ++A E+ M KG + + + S
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 61 LING 64
LI+G
Sbjct: 444 LIDG 447
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + M ++G+ P+ T + L+DG+C A + + A L M KG D +++
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478
Query: 61 LING 64
LI+G
Sbjct: 479 LIDG 482
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M+ G+ P+ T L+DG C D AR+ L+ M S G + F ++
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 61 LING 64
LI+G
Sbjct: 339 LIDG 342
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + M G+ P+ T N +MDG+C +A EL M G + + I
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 61 LING 64
LI+G
Sbjct: 304 LIDG 307
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + + + PD T + L+ G C DR + A LL M KG +A +++
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 61 LING 64
LI+G
Sbjct: 409 LIDG 412
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M GV P+ N L+DG+C A A L + D F++SILI G
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L MI++G+ PD T +L+ GFC D+ + A E+L MG + + ++ ++ +
Sbjct: 353 MDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRL 412
Query: 61 LING 64
+ING
Sbjct: 413 VING 416
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + + M+ G+ PD T N ++ GFC + A +LL M GC D +++
Sbjct: 73 IERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNT 132
Query: 61 LI 62
+I
Sbjct: 133 II 134
>gi|295828232|gb|ADG37785.1| AT1G06270-like protein [Capsella grandiflora]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 50 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 98
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
EA L E M+ R + PD T N L++GFC + DRAR ++ M S GC + +++S L
Sbjct: 287 EAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSAL 346
Query: 62 ING 64
++G
Sbjct: 347 VDG 349
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G+ + G+ PD T +L++ C + D A ELL M GC+ D+ + ++
Sbjct: 356 LEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNV 415
Query: 61 LING 64
L+ G
Sbjct: 416 LLGG 419
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M G P+ +AL+DG C + + A+ +L + G K DA +++ L
Sbjct: 322 DRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSL 381
Query: 62 IN 63
IN
Sbjct: 382 IN 383
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L E M + G D+ T N L+ G C +F+ A +++ + +G + S+ I+
Sbjct: 392 DEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIV 451
Query: 62 IN 63
+N
Sbjct: 452 LN 453
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA GL M + G PD NAL+ G AD D A L +M GC D SH+I+
Sbjct: 494 NEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNII 553
Query: 62 ING 64
+NG
Sbjct: 554 LNG 556
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M + G NPD ++ N +++G RA E+ M S K DA S++
Sbjct: 528 MDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNT 587
Query: 61 LI 62
++
Sbjct: 588 VL 589
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ E M + GV P + T + L+DGFC +R ++A LL M KG ++ LI
Sbjct: 390 EASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 449
Query: 63 N 63
N
Sbjct: 450 N 450
>gi|295828226|gb|ADG37782.1| AT1G06270-like protein [Capsella grandiflora]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 50 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 98
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + MIQR V+P+ T N+L++G C+ D A+++L M SKG +A +++ L+
Sbjct: 266 EAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLV 325
Query: 63 NG 64
NG
Sbjct: 326 NG 327
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ +G P+ T N L++G+C + R D A ++L M G D F+++
Sbjct: 299 LDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNT 358
Query: 61 LING 64
L G
Sbjct: 359 LYQG 362
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + +M GV+ DT T N L G+C A +F+ A ++L M S G D ++ ++
Sbjct: 334 VDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNM 393
Query: 61 LING 64
L++G
Sbjct: 394 LLDG 397
>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 376
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G+NP T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC +++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+ Q+G D +A+++G C D+A +L M GCK +A ++ LING
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLING 173
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ G+ PD T A + FC + RF+ A+EL +SM + GC D+F+ +I
Sbjct: 618 VEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNI 677
Query: 61 LING 64
+++
Sbjct: 678 ILDA 681
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M +G+ P+ T N L+DG+C ++R+LLV + G K D F+ S
Sbjct: 478 MDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSS 537
Query: 61 LING 64
+I+G
Sbjct: 538 IIDG 541
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G++P T NA++D ++ D A M + CK D F+++ILI+G
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHG 261
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M G+NPD + NAL+ FC + + A++L SM S G D +++ I
Sbjct: 593 MQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFI 644
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G M+ G++P+ T N L+ C+ R+ +LL M + G D FS +
Sbjct: 548 IEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNA 607
Query: 61 LI 62
LI
Sbjct: 608 LI 609
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L+++ G+ P+T TCNAL+ G+C +A L + M GC+++ +S++ILI G
Sbjct: 208 LLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQG 262
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L E M++ G+NP +T ++L+ GFC A R + A LL M KG + +++LI
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L ++ G P T L++G+C+A++FD A + M S CK D L
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKL 433
Query: 62 IN 63
IN
Sbjct: 434 IN 435
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + G+ P+ T +++DG+C + + D A E+L M GC+ +A++++
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 61 LING 64
L+ G
Sbjct: 503 LMYG 506
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + M G P +T ++ +C R + A +L++ M +G D +++IL
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745
Query: 62 ING 64
I+G
Sbjct: 746 IDG 748
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + ELM + G +PD T N L+ G C + + A ELL + +G + +
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTN 397
Query: 61 LING 64
LING
Sbjct: 398 LING 401
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M Q GV P T NA++ G+ R + A ++ M GC D ++++ LI
Sbjct: 306 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 365
Query: 63 NG 64
G
Sbjct: 366 YG 367
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L+++ G+ P+T TCNAL+ G+C +A L + M GC+++ +S++ILI G
Sbjct: 208 LLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQG 262
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L E M++ G+NP +T ++L+ GFC A R + A LL M KG + +++LI
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L ++ G P T L++G+C+A++FD A + M S CK D L
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKL 433
Query: 62 IN 63
IN
Sbjct: 434 IN 435
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + G+ P+ T +++DG+C + + D A E+L M GC+ +A++++
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 61 LING 64
L+ G
Sbjct: 503 LMYG 506
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + M G P +T ++ +C R + A +L++ M +G D +++IL
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745
Query: 62 ING 64
I+G
Sbjct: 746 IDG 748
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + ELM + G +PD T N L+ G C + + A ELL + +G + +
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTN 397
Query: 61 LING 64
LING
Sbjct: 398 LING 401
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M Q GV P T NA++ G+ R + A ++ M GC D ++++ LI
Sbjct: 306 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 365
Query: 63 NG 64
G
Sbjct: 366 YG 367
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M++RG+ P+ T NAL++G C + DRA++L + KG + S++I
Sbjct: 760 VNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNI 819
Query: 61 LING 64
LI+G
Sbjct: 820 LIDG 823
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M+ G+ + CNAL++G+C + A LL+ M + +++S+S
Sbjct: 340 MDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYST 399
Query: 61 LING 64
L++G
Sbjct: 400 LMDG 403
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMG-SKGCKQDAFSHS 59
M+ A + +LM +RG+ + T L+ G+C + + A ++L M S+G D +++
Sbjct: 269 MERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYG 328
Query: 60 ILING 64
+LI+G
Sbjct: 329 VLIDG 333
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
MI+ G +P+ T N L+DG CL + D A + M + C+ A ++++LI G + +R
Sbjct: 241 MIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALR 300
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + E M++R P T L+ G A R D+A + V M +G + + ++++
Sbjct: 266 LDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTA 325
Query: 61 LING 64
LI G
Sbjct: 326 LIGG 329
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN M++RGV P+ T AL+ G C A++ + A E+L M S G + + +++
Sbjct: 301 IDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTR 360
Query: 61 LI 62
+I
Sbjct: 361 VI 362
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MDEANGLAELMIQ----RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAF 56
M++A L E MI+ V PD + N ++ GFC A + AR +L M GC +
Sbjct: 192 MEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVV 251
Query: 57 SHSILING 64
+ + L++G
Sbjct: 252 TFNTLLDG 259
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
MI+ G +P+ T N L+DG CL + D A + M + C+ A ++++LI G + +R
Sbjct: 241 MIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALR 300
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + E M++R P T L+ G A R D+A + V M +G + + ++++
Sbjct: 266 LDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTA 325
Query: 61 LING 64
LI G
Sbjct: 326 LIGG 329
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN M++RGV P+ T AL+ G C A++ + A E+L M S G + + +++
Sbjct: 301 IDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTR 360
Query: 61 LI 62
+I
Sbjct: 361 VI 362
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MDEANGLAELMIQ----RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAF 56
M++A L E MI+ V PD + N ++ GFC A + AR +L M GC +
Sbjct: 192 MEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVV 251
Query: 57 SHSILING 64
+ + L++G
Sbjct: 252 TFNTLLDG 259
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + + MI+ G P T NAL++G C++ R + A LL M KG D S+S
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453
Query: 61 LING 64
+I G
Sbjct: 454 IIAG 457
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA GL M +G++PD + + ++ GFC DRA ++ M KG DA ++S
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488
Query: 61 LING 64
LI G
Sbjct: 489 LIQG 492
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M+++GV+PD T ++L+ G C R + A +L M +K D F+++
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTS 523
Query: 61 LING 64
LING
Sbjct: 524 LING 527
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M G+ P+ T N +++G C R + +L M KG D +++
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313
Query: 61 LING 64
L+NG
Sbjct: 314 LVNG 317
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M++ G+ PD T +L++ C A +RA E M +G + + +++ LING S +
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQK 391
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ + + PD T +L++G+C + A L M KG D ++++
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558
Query: 61 LINGGSARIR 70
LING + + R
Sbjct: 559 LINGLNKQAR 568
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E +G+ M ++G PD T N L++G+C F +A L M G D +++
Sbjct: 289 IEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS 348
Query: 61 LIN 63
LIN
Sbjct: 349 LIN 351
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T N ++ +C R D A +LL SMG +G + + +++++ING
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282
>gi|145337672|ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g77405
gi|91806103|gb|ABE65780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197853|gb|AEE35974.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 458
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EAN + M+ RG PD T N L+DG C +R RA EL M +KGC + +++
Sbjct: 264 MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNS 323
Query: 61 LI 62
I
Sbjct: 324 FI 325
>gi|357131801|ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Brachypodium distachyon]
Length = 585
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + E M G PD T + L+ G C A++ D AR++LV M ++GC D + ++L
Sbjct: 344 DEAAEVMESMRSEGHQPDNITYSQLVFGLCKANKCDEARKVLVEMENEGCAPDLKTWTML 403
Query: 62 ING 64
I G
Sbjct: 404 IQG 406
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella
moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella
moellendorffii]
Length = 855
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + M G+ PD CN +++G C A + D+A EL + M S GC+ S++
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 61 LING 64
+I+G
Sbjct: 61 VISG 64
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E M+Q+G PDT T L+DGF A + D AR+LL M +KG + A ++
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 508
Query: 61 LING 64
+++G
Sbjct: 509 IVHG 512
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L ++M+ +G P T +++ GFC D + A+E++ M +GC+ F +
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543
Query: 61 LIN 63
L++
Sbjct: 544 LLS 546
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + ELM + GV PD N+LMDG+ +R D+A + M + G K +A + ++
Sbjct: 624 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683
Query: 61 LING 64
L++G
Sbjct: 684 LMHG 687
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD T N L+ GF A+R D A EL + S GCK +A +++ +I G
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG 343
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++ GVNPD +AL+ G + D A ++ M +GC + ++ +L
Sbjct: 767 EAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLR 826
Query: 63 NGGSARIR 70
G A R
Sbjct: 827 RGFRAAGR 834
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + + ++ + V N+LMDG+C R D +LL+ M D +++I
Sbjct: 245 VDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304
Query: 61 LINGGS 66
L+ G S
Sbjct: 305 LVAGFS 310
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D+A G+ + M+ G+ P+ T N LM G + DRA L M K S++
Sbjct: 659 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718
Query: 60 ILING 64
ILI+G
Sbjct: 719 ILIDG 723
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + M RG PD +L+D R AR + SM KGC DA ++ +
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614
Query: 62 INGGS 66
I S
Sbjct: 615 IQNFS 619
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M G P + N ++ G D+ D A + SM GC+ D + +
Sbjct: 36 IDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTT 95
Query: 61 LING 64
LI+G
Sbjct: 96 LIHG 99
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q + P NAL++G+C+ R D ARELL M +KG K D ++S +I+
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 444
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ L + MI+ G+ PD T +L+DG C + A L M G D ++S+
Sbjct: 486 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSV 545
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 546 LINGLSKSAR 555
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+++GV PD T ++L+ C R A L +M G + D F+++ LI+G
Sbjct: 457 LNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 514
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M +G+ PD T + ++ +C A EL M KG DA ++S
Sbjct: 416 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 475
Query: 61 LI 62
LI
Sbjct: 476 LI 477
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M Q+G+ PD T +L+ C A +RA L+ M +G + + + + LI
Sbjct: 313 EALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALI 372
Query: 63 NG 64
+G
Sbjct: 373 DG 374
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M++ G+ PD + N L+ G+C A A + M KG D + +
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335
Query: 61 LIN 63
LI+
Sbjct: 336 LIH 338
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A ELM+ RG PD + N L+ C D A ELL + KGC S++
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 61 LING 64
+I+G
Sbjct: 407 VIDG 410
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N +++G C R D A E L S+ S GC+ + S++I++
Sbjct: 209 QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVL 268
Query: 63 NG 64
G
Sbjct: 269 KG 270
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++RG PD T L++ C + +A +LL M +KGC D ++++++NG
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + G P+T + N ++ G C A+R++ A +L+ M KG + + ++
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 61 LIN 63
LI+
Sbjct: 302 LIS 304
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G P++ + N ++ FC + DRA + M S+GC D S++ L+
Sbjct: 326 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTA 375
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P+T NA++ G C A +L + M S GC + +++ILI G
Sbjct: 466 GIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + M+++GV P+ T N L+DG+ + FDR ++L M KG K + S+
Sbjct: 443 MEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGC 502
Query: 61 LIN 63
LIN
Sbjct: 503 LIN 505
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + E M V P T N+L++G C A + A+ +L M G D F+++
Sbjct: 268 LEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTT 327
Query: 61 LING 64
L +G
Sbjct: 328 LFDG 331
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RGV P+ N L+DG C+A + A M ++ +++ILING
Sbjct: 523 MVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILING 576
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M V PD T N LM G+C + + AR+LL M +G K D S++
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536
Query: 61 LINGGSAR 68
LI+G S R
Sbjct: 537 LISGYSKR 544
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV P+ T N ++ G CL +F RAR + +M KG + D ++++ I+G
Sbjct: 246 GVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISG 295
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L + Q G+ PD NAL+DG C DRA +LL M + D +++
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501
Query: 61 LING 64
L+ G
Sbjct: 502 LMQG 505
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 35/99 (35%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRA---RELLVSMG---------- 47
++EA+GL M++ G+ P+ T NAL+DG+C D+A R+ ++S G
Sbjct: 302 LEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNL 361
Query: 48 ----------------------SKGCKQDAFSHSILING 64
KG DA +H+ILING
Sbjct: 362 FIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILING 400
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M ++G+ PD T N L++G+C RA LL M KG + +++
Sbjct: 372 MGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTS 431
Query: 61 LI 62
LI
Sbjct: 432 LI 433
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ M +G+ PD T N+ + G C R + A L+ M G +A +++ LI+G
Sbjct: 275 QTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG 330
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD 54
M +A + + M+ G +P T NAL+ G C + A ELL M SKG D
Sbjct: 547 MKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD 600
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +RG+ P+ T AL+DG C R A++L + KGC D +++++
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNV 557
Query: 61 LING 64
+I G
Sbjct: 558 MIGG 561
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+ + V P+T T N+L+DG C + R A +L+ + +G D +++
Sbjct: 428 VDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487
Query: 61 LING 64
L++G
Sbjct: 488 LLDG 491
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L +M + GV P+ T + LMDG+CL A+++ +M S++I
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNI 417
Query: 61 LING 64
+ING
Sbjct: 418 MING 421
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA M RG+ PD T + L+ GFCLA + A LL M K D ++++I
Sbjct: 288 VNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTI 347
Query: 61 LING 64
LI+
Sbjct: 348 LIDA 351
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + +NPD T L+D C + A+ LL M +G K + ++S L++G
Sbjct: 333 MTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG D T +L+DG C D+A L + M +G + + ++++ LI+G
Sbjct: 475 HRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--GSAR 68
M+Q VNP + N +++G C D A LL M K + +++ LI+G S R
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462
Query: 69 I 69
I
Sbjct: 463 I 463
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L ++ R PD N ++DG C + A + M S+G D ++S LI G
Sbjct: 259 LLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICG 316
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G E M+ G++PD T ALM+G C R A+ LL M G K + ++
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 61 LING 64
L++G
Sbjct: 356 LVDG 359
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A GL + M + G+ P NAL+DGFC + RAR + S+ +KG + +++
Sbjct: 681 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTA 740
Query: 61 LING 64
LI+G
Sbjct: 741 LIDG 744
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ L MI+ G PDT T + LM G D A ELL M + G +A+++ I+IN
Sbjct: 404 ASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMIN 463
Query: 64 G 64
G
Sbjct: 464 G 464
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + +RG+ PD T + L+ G+C ++A +LL M + G K +A +++
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600
Query: 61 LING 64
L+ G
Sbjct: 601 LLEG 604
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ PD T + ++ C A FD A+++ M + C + +++++I+G
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 289
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L +M ++G+N D T N L +G C R+D A+ +L SM KG K + + ++
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTM 467
Query: 61 LI 62
I
Sbjct: 468 FI 469
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A L M +GV+ + N MDG+C + D A L M KG D F+++I
Sbjct: 373 MEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNI 432
Query: 61 LING 64
L NG
Sbjct: 433 LANG 436
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ + MI +G+ PD T ++L+ G C+ R D A +L M KG ++ +++ +I
Sbjct: 515 QAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMI 574
Query: 63 NGGSARIR 70
+G S R
Sbjct: 575 SGLSKEGR 582
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M ++G P+ T N L+D +C ++ +A ++ M +KG D +++S
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSS 537
Query: 61 LING 64
LI+G
Sbjct: 538 LIHG 541
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
M A L + M QR + P+ T AL+ G C A + + A LL+ M SKG
Sbjct: 338 MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG 387
>gi|297848900|ref|XP_002892331.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338173|gb|EFH68590.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 343
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ MG+ GC D S+ +IN
Sbjct: 166 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGAAGCIPDVESYGAVIN 214
>gi|255558614|ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540551|gb|EEF42118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L +M+ +G PD T N L+DG C R +RA EL M +GC + +++ I
Sbjct: 267 EANHLFRIMLFKGFAPDVVTYNCLIDGCCKTYRIERALELFEDMNRRGCVPNRVTYNSFI 326
Query: 63 NGGSA 67
SA
Sbjct: 327 RYYSA 331
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EAN +ELMI+ G D++ N L+ C + D A ELL M G + D ++ SI
Sbjct: 271 MEEANTYSELMIRSGFRLDSACYNTLIYLRCKEGKLDDAFELLSMMEEGGLESDEYTFSI 330
Query: 61 LING 64
L+NG
Sbjct: 331 LVNG 334
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
I+ G+ PD T N L+ C A D +L M G DA +++ LI G + R
Sbjct: 37 IRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMREAGVSPDAITYNSLIAGAARR 93
>gi|297839599|ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 459
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EAN + M+ RG PD T N L+DG C +R RA EL M +KGC + +++
Sbjct: 264 MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNS 323
Query: 61 LI 62
I
Sbjct: 324 FI 325
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L + +++R + P T N L++G+C + D+A ELL M KG D +++
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580
Query: 61 LING--GSARIRK 71
LI+G + R+ K
Sbjct: 581 LISGLCSTGRVSK 593
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M Q+G+ PDT T L+ G C R +A++ + + + K + +S
Sbjct: 556 IDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSA 615
Query: 61 LING 64
L++G
Sbjct: 616 LLHG 619
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI G+ P+ T AL+ G C ++ A EL + + K ++++LI G
Sbjct: 496 MIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEG 549
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ GV PD TC+A++ C F RA+E + M + G ++++LI+G
Sbjct: 217 VNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHG 269
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A+ M+QRG++ D LM+G+C A R A +L V M + G K D ++++
Sbjct: 625 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 684
Query: 61 LING 64
L++G
Sbjct: 685 LLDG 688
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q+G+ PD AL++G+C +A +LL M KG + D + S+L
Sbjct: 748 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL- 806
Query: 63 NGGSARIRK 71
N S R RK
Sbjct: 807 NQSSLRSRK 815
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L M + PD L+DG C A+ AREL M KG DA++++ LING
Sbjct: 715 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 774
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + E M++ + PD T N L GFC + +LL M +G + ++ ++ I
Sbjct: 450 MQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGI 509
Query: 61 LING 64
I G
Sbjct: 510 AIVG 513
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L ++MIQ V PD T AL++G C R D AR++ M S G + +++ LI
Sbjct: 275 EAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLI 334
Query: 63 NG 64
+G
Sbjct: 335 HG 336
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q+G+ +T T L+ G+CL R D A+E+ MGS+ D ++++L++G
Sbjct: 353 MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDG 406
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + LM G P+ T L+ GFC + R + ++ M KG + ++++
Sbjct: 308 LDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTV 367
Query: 61 LING 64
LI G
Sbjct: 368 LIQG 371
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M++RG+ P+ T AL+D F + A+EL M D F+++ LI
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299
Query: 63 NG 64
NG
Sbjct: 300 NG 301
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ + + + ++MIQ ++P+ T ++L+ G C+ +R D A ++L M SKGC + ++S
Sbjct: 279 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 338
Query: 61 LING 64
L NG
Sbjct: 339 LANG 342
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LMI +G P+ T + L +GF + R D +LL M +G + S +
Sbjct: 314 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 373
Query: 61 LING 64
LI G
Sbjct: 374 LIKG 377
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M++ G+ PD T ++L++GFCL++ A + M G K+D +ILI+
Sbjct: 149 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILID 201
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L + M QRGV +T +CN L+ G+ A + D A + M S G + S++I
Sbjct: 349 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 408
Query: 61 LING 64
++ G
Sbjct: 409 VLAG 412
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + GV P+ T NA+M G C A + DRA + L M +GCK S++I
Sbjct: 345 VDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTI 404
Query: 61 LING 64
LI G
Sbjct: 405 LIEG 408
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M + G P++ + N L+ GFC + +RA E L M S+GC D +++ L+
Sbjct: 213 EKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTA 268
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
M RG PD T N L+ C + D A ELL + SKGC +++ +I+G S
Sbjct: 250 MTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 305
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E++ G PD T N L+ G C R+ A +LL M +GC + +ILI
Sbjct: 137 KATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILI 196
Query: 63 N 63
N
Sbjct: 197 N 197
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E E M+ RG PD C +L+ GFC + +A ++ + G D ++++
Sbjct: 100 LEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNV 159
Query: 61 LING 64
LI+G
Sbjct: 160 LISG 163
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD LA+ M++RG +P T N L++ C RA ++L M GC ++ S++
Sbjct: 171 MDAEKLLAD-MVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNP 229
Query: 61 LING 64
L++G
Sbjct: 230 LLHG 233
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + +G +P T N ++DG + D+A +LL M +KG K D ++S
Sbjct: 275 VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSS 334
Query: 61 LINGGS 66
L+ G S
Sbjct: 335 LVGGLS 340
>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L ++MI +G PD N L++G+C A R D+A++L M +G D +++ LI
Sbjct: 12 EARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLI 71
Query: 63 NG 64
+G
Sbjct: 72 HG 73
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L MI +G+ PD T N L+ G C R A++L +M G D F++SI
Sbjct: 45 IDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSI 104
Query: 61 LING 64
L++G
Sbjct: 105 LLDG 108
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + +G+ P+ +++G C D A E +M GC D FS+++
Sbjct: 150 LKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNV 209
Query: 61 LING 64
+I G
Sbjct: 210 IIRG 213
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L+++ G+ P+T TCNAL+ G+C +A L + M GC+++ +S++ILI G
Sbjct: 93 LLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQG 147
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L E M++ G+NP +T ++L+ GFC A R + A LL M KG + +++LI
Sbjct: 697 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 752
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L ++ G P T L++G+C+A++FD A + M S CK D L
Sbjct: 259 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKL 318
Query: 62 IN 63
IN
Sbjct: 319 IN 320
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + G+ P+ T +++DG+C + + D A E+L M GC+ +A++++
Sbjct: 328 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 387
Query: 61 LING 64
L+ G
Sbjct: 388 LMYG 391
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + M G P +T ++ +C R + A +L++ M +G D +++IL
Sbjct: 571 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 630
Query: 62 ING 64
I+G
Sbjct: 631 IDG 633
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + ELM + G +PD T N L+ G C + + A ELL + +G + +
Sbjct: 224 MNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTN 282
Query: 61 LING 64
LING
Sbjct: 283 LING 286
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M Q GV P T NA++ G+ R + A ++ M GC D ++++ LI
Sbjct: 191 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 250
Query: 63 NG 64
G
Sbjct: 251 YG 252
>gi|297823431|ref|XP_002879598.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
gi|297325437|gb|EFH55857.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M + PD T N L++G+C + +FD A +L M KGC+ + S +
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNTLINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 61 LINGGSAR 68
LI G +R
Sbjct: 269 LIRGFLSR 276
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A+G E M+ G+ PD+ T N L+ C +DR A L + SKG + D ++ +L
Sbjct: 385 EKASGFMEEMMNAGILPDSVTFNLLLRDLCSSDRSTDANSLRLLASSKGYEPDETTYHVL 444
Query: 62 INGGSARIRK 71
++G + R+
Sbjct: 445 VSGFTKEGRR 454
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+++G+ P+ T N+LMD + D A SM C + +++SI
Sbjct: 681 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSI 740
Query: 61 LING 64
LING
Sbjct: 741 LING 744
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING----GS 66
MI+RG PD + N MD A ++ R + M S G D S+SILI+G G
Sbjct: 516 MIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575
Query: 67 AR 68
AR
Sbjct: 576 AR 577
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M + V+P +T +++DG DR D A L SKG + + +S
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670
Query: 61 LING 64
LI+G
Sbjct: 671 LIDG 674
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M G+ P+ + N ++D C A++ + A + S +GC ++ ++
Sbjct: 401 VNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCS 460
Query: 61 LING 64
LI+G
Sbjct: 461 LIDG 464
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + + + M Q+G D NA++DG C + + D+A E+L M K ++ ++
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637
Query: 63 NG 64
+G
Sbjct: 638 DG 639
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A ++ G D +CN L+D FC A + + A L MG KG + DA ++ I
Sbjct: 456 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGI 515
Query: 61 LING 64
LING
Sbjct: 516 LING 519
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL E M++RG+ PD C AL+ G C + D A EL M + + + ++ LI
Sbjct: 318 EAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALI 377
Query: 63 NG 64
+G
Sbjct: 378 SG 379
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA LA M+ + + S NAL+ GF A ++A + + M GC+ D +++I
Sbjct: 351 VDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNI 410
Query: 61 LIN 63
L+N
Sbjct: 411 LLN 413
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A M + G PD T N L++ +C D+A L+ M G D +S++I
Sbjct: 386 IEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNI 445
Query: 61 LING 64
L+ G
Sbjct: 446 LLKG 449
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A ++ G D +CN L+D FC A + + A L MG KG + DA ++ I
Sbjct: 456 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGI 515
Query: 61 LING 64
LING
Sbjct: 516 LING 519
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL E M++RG+ PD C AL+ G C + D A EL M + + + ++ LI
Sbjct: 318 EAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALI 377
Query: 63 NG 64
+G
Sbjct: 378 SG 379
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA LA M+ + + S NAL+ GF A ++A + + M GC+ D +++I
Sbjct: 351 VDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNI 410
Query: 61 LIN 63
L+N
Sbjct: 411 LLN 413
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A M + G PD T N L++ +C D+A L+ M G D +S++I
Sbjct: 386 IEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNI 445
Query: 61 LING 64
L+ G
Sbjct: 446 LLKG 449
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M + G NPD NALM G D A LL +M GC D SH+I
Sbjct: 492 LSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNI 551
Query: 61 LING 64
++NG
Sbjct: 552 ILNG 555
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING-GSA 67
E M + GV P + T + L+DGFC +R ++A LL M KG ++ LIN G A
Sbjct: 395 EKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKA 454
Query: 68 R 68
+
Sbjct: 455 K 455
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L +M+ +GV PD ST N L+ G C + AR L+ M +K K D +++I
Sbjct: 357 MEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNI 416
Query: 61 LIN 63
LI+
Sbjct: 417 LID 419
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ + P+ T NAL++GFC +A EL M +G + +++I
Sbjct: 287 VNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNI 346
Query: 61 LING 64
LI+
Sbjct: 347 LIDA 350
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M G+ P+ T N L+DGFC A ++ M +G K + +++
Sbjct: 217 MYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNS 276
Query: 61 LING 64
LING
Sbjct: 277 LING 280
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M ++G+ P+ +T N L+D +C + + A L M KG D +++
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381
Query: 61 LING 64
LI G
Sbjct: 382 LIAG 385
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++GV P+ T N+L++G C + + A L M + K + +H+ L+NG
Sbjct: 262 MNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNG 315
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+LM++RG P+ T NA+++G C R D A +L +M KG K D ++S L+ G
Sbjct: 328 DLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKG 383
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK--GCKQDAFSH 58
+D+A G+ E M ++G PD T + L+ G C + D A +LL + SK K D F+
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAF 414
Query: 59 SILI 62
+++I
Sbjct: 415 NLVI 418
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E GL E M + G+ D +AL+ GFC +R +EL M K + ++S
Sbjct: 215 VEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSC 274
Query: 61 LING 64
L+N
Sbjct: 275 LMNA 278
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++RG + T N L+DG+ A + +A EL G +A ++++LING
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLING 490
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M P++ T +AL+DGFC + LL M G + D F +S LI
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 63 NG 64
+G
Sbjct: 242 SG 243
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA GL M++RGV+P+T + L+D +C F A+ + M KG + ++++L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511
Query: 62 INGGSAR 68
I+G S R
Sbjct: 512 IDGYSKR 518
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L + + RG+ PD TC +L+ G C+ + D A +L M +G + +++
Sbjct: 521 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 580
Query: 61 LINGGS 66
+I+G S
Sbjct: 581 MISGLS 586
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +M ++G+ D N++ G C +R D A+ LL SM +G + S +
Sbjct: 416 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475
Query: 61 LIN 63
LI+
Sbjct: 476 LID 478
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A L M +G++ + N L+DG+C + D A L V M KG + D F+++
Sbjct: 381 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 440
Query: 61 LING 64
+ +G
Sbjct: 441 IASG 444
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q + P NAL++G+C+ R D ARELL M +KG K D ++S +I+
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 404
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ L + MI+ G+ PD T +L+DG C +RA L M G D ++S+
Sbjct: 446 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSV 505
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 506 LINGLSKSAR 515
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+++GV PD T ++L+ C R A L +M G + D F+++ LI+G
Sbjct: 417 LNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 474
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M +G+ PD T + ++ +C A EL M KG DA ++S
Sbjct: 376 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 435
Query: 61 LI 62
LI
Sbjct: 436 LI 437
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M++ G+ PD + N L+ G+C A A + M KG D + +
Sbjct: 236 MEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 295
Query: 61 LIN 63
LI+
Sbjct: 296 LIH 298
>gi|224131960|ref|XP_002328150.1| predicted protein [Populus trichocarpa]
gi|222837665|gb|EEE76030.1| predicted protein [Populus trichocarpa]
Length = 347
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M ++G P+ A++DGFC A + D A+ + M S G +AFS+++
Sbjct: 192 VQEALKLFGTMREKGTIPEVVIYTAVVDGFCKAHKLDDAKRIFRKMQSNGITPNAFSYAV 251
Query: 61 LINGGS 66
LI G S
Sbjct: 252 LIQGLS 257
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M +G +PD T +++DGFC + D+A++++ M CK +A +++
Sbjct: 473 IQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT 532
Query: 61 LING 64
+NG
Sbjct: 533 FLNG 536
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+ +A AE M+ G+ P+ T N L+ G+C + D+A EL+ M SKGC D S+
Sbjct: 332 LKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSY 389
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M + G NPD NALM G D A LL +M GC D SH+I
Sbjct: 492 LSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNI 551
Query: 61 LING 64
++NG
Sbjct: 552 ILNG 555
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING-GSA 67
E M + GV P + T + L+DGFC +R ++A LL M KG ++ LIN G A
Sbjct: 395 EKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKA 454
Query: 68 R 68
+
Sbjct: 455 K 455
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + GV+P+ T N L+ C DR D AR++L M KGC D SH +++G
Sbjct: 148 MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 201
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + M+QRG+ P+ T ++D FC A A +L M S GC + + +
Sbjct: 238 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTA 297
Query: 61 LING 64
L+ G
Sbjct: 298 LVKG 301
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
L +M+Q G+ PD T NA++ +C + A LL M + C ++ +++ILI+
Sbjct: 525 LGRMMVQ-GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILIS 580
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
MIQRG+ PD T N+L++G C RF A L + +KG DA +++ LI+
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLIS 660
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 8 AELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLV-SMGSKGCKQDAFSHSILING 64
A M+ + NP+T N L++G+ ++ RF+ A++LL +M G + DAF+ +I+I+G
Sbjct: 324 ARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDG 381
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 6 GLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GL E M + P ++CN L++ FC + + A + L M +G D +++ LING
Sbjct: 568 GLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M+ RG++P T +M FC+ + D A LL M GC ++ + +LI+ S R
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M+++G P+ T L+DGFC F+ A +++ SM +KG + ++ LI
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLI 449
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G PD T N ++DG C A E L M KG + + +++ILI+G
Sbjct: 363 MVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDG 416
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA+ + M +G++ +T N L+ C + A ++ M SKGCK D ++ + L
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Query: 62 ING 64
I G
Sbjct: 484 IYG 486
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + +G++PD T N L+ +C F+ A +LL S G + + SILI
Sbjct: 635 EALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Query: 63 N 63
N
Sbjct: 695 N 695
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M RG PD T N+ + G C DR D AR+ L M D S++
Sbjct: 131 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTT 187
Query: 61 LING 64
+ING
Sbjct: 188 VING 191
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M +RG PD + NA +DG C A+R +A+ + M +GC +A S+S+L+
Sbjct: 278 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVE 330
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ + + M RG PD T ++L+DGFC +RA LL SM GC+ + +++
Sbjct: 198 LDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 257
Query: 61 LI 62
L+
Sbjct: 258 LL 259
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
MI + PD T L+ G C +++ ++AR+LL M GC D ++ LI+G S
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYS 56
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LAE M++ P T ++DG C A R A +LL M KGC + +++++++ G
Sbjct: 68 LAE-MVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL R +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|357124808|ref|XP_003564089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Brachypodium distachyon]
Length = 502
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MDEANGLAELMIQR-GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
M EA L E MI++ + PD T N +++GFC + D+AR + M C+ +AF+++
Sbjct: 242 MKEAFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYA 301
Query: 60 ILINGGSAR 68
L+NG S +
Sbjct: 302 TLMNGHSRK 310
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M GV PD + AL+ C D +L+ M KGCK D ++++LI G
Sbjct: 321 EEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEG 376
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M ++G D T N L++G C R A +LL S+ +G + + S+ I
Sbjct: 348 VDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKRMVEAMDLLRSLPLEGVQLNVASYRI 407
Query: 61 LIN 63
++N
Sbjct: 408 VMN 410
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + +M+++G+ PD T N+L+DG+ L + A+ + +M G D S++I
Sbjct: 163 MKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 222
Query: 61 LING 64
LING
Sbjct: 223 LING 226
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M Q GVNPD + N L++GFC + D+A L M K + +++
Sbjct: 198 VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNS 257
Query: 61 LINGGSARIR 70
LI+G S R
Sbjct: 258 LIDGLSKSGR 267
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RGV P+ T N+++D + D+A L+ +G + ++++ILI+G
Sbjct: 274 LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 331
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ +G++P+ T +AL+ GF + + A +L + + K D ++ +I
Sbjct: 93 VNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNI 152
Query: 61 LING 64
L++G
Sbjct: 153 LVDG 156
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L +I + PD T N L+DGFC + + + M +G D +++
Sbjct: 128 LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNS 187
Query: 61 LING 64
L++G
Sbjct: 188 LVDG 191
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M++ PD TCN LM+G CL + D+A +L S KG K D +++ LI
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLI 636
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS-HS 59
++EA G E + + G+ PD T N L+D +C A +A L+ M KG K D F+ ++
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459
Query: 60 ILIN 63
+L N
Sbjct: 460 VLYN 463
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + MI+R + P ST N L+ G C +R A + L + KG D +++I+I+
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHA 568
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E ++Q+G+ P++ T N L+D A+ D A+ +M + C +A ++SI
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSI 767
Query: 61 LING 64
+ING
Sbjct: 768 MING 771
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G++ D N ++DGFC + + D+A +LL M +KG + ++ +++G
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDG 666
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG +PD N+ MD A ++ R L + ++G D S+SILI+G
Sbjct: 543 MVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + M + G+ P+ T N ++D C A + D A + + + K C D+ +
Sbjct: 428 LEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCS 487
Query: 61 LINGGSARIR 70
LI+G R R
Sbjct: 488 LIDGLGRRGR 497
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M +G+ P T +++DG DR D A L S G + +S
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSS 697
Query: 61 LING 64
LI+G
Sbjct: 698 LIDG 701
>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E M+ +G NP+ N+L+DG+C + A LL+ + ++ K D F+ S LI
Sbjct: 582 DAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALI 641
Query: 63 NG 64
NG
Sbjct: 642 NG 643
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D GL E M +RG++P T N++++G C A R A E+ SKG DA + S
Sbjct: 279 IDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEV-----SKGIAGDAVTFST 333
Query: 61 LING 64
L++G
Sbjct: 334 LLHG 337
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G E M + G+ P+ T A+M GFC + D A L + + G + D F +
Sbjct: 209 VEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVT 268
Query: 61 LINGGSAR 68
LI+G R
Sbjct: 269 LIDGFCTR 276
>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
Length = 751
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A+ M+QRG++ D LM+G+C A R A +L V M + G K D ++++
Sbjct: 556 MDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 615
Query: 61 LING 64
L++G
Sbjct: 616 LLDG 619
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q+G+ PD AL++G+C +A +LL M KG + D + S+L
Sbjct: 679 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL- 737
Query: 63 NGGSARIRK 71
N S R RK
Sbjct: 738 NQSSLRSRK 746
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L M + PD L+DG C A+ AREL M KG DA++++ LING
Sbjct: 646 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 705
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + E M++ + PD T N L GFC + +LL M +G + ++ ++ I
Sbjct: 381 MQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGI 440
Query: 61 LING 64
I G
Sbjct: 441 AIVG 444
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M++RG+ P+ T NAL++G C ++ DRA+ L + KG + +++
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 824
Query: 61 LING 64
LI+G
Sbjct: 825 LIDG 828
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L + MI+ G++P T +AL++G C +R+ +LL M G +
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894
Query: 61 LINGG 65
L+ GG
Sbjct: 895 LVQGG 899
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q G+ P T N L+ G C FD A ++ M G D +S L+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLL 479
Query: 63 NG 64
+G
Sbjct: 480 DG 481
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + Q+G+ P+ T N L+DG+C D A +L M +G ++S
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859
Query: 61 LING 64
LING
Sbjct: 860 LING 863
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G + M GV P+ T ++L++G+ + A+ +L M KG ++ ++++
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 61 LING 64
LI G
Sbjct: 302 LIKG 305
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M++ G+ + CN+L++G+C A ++ M K D++S++
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407
Query: 61 LING 64
L++G
Sbjct: 408 LLDG 411
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
MDEA + M + + PD L+DG+C + D A LL M G K + F +
Sbjct: 312 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 371
Query: 60 ILINGGSAR 68
LING R
Sbjct: 372 SLINGYCKR 380
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G+ M+ + PD+ + N L+DG+C A L M +G + +++
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNT 442
Query: 61 LING 64
L+ G
Sbjct: 443 LLKG 446
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +G+ P + N L+DG C R + A+ LLV M S G D ++SI
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320
Query: 61 LING 64
LI+G
Sbjct: 321 LIDG 324
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G+ PDT N+L+ G A + D AR L+ M G K DAF++ I+G
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISG 534
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M+Q G+ + N L+ GFC + ++A+ELL M KG +A ++
Sbjct: 646 MQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCT 705
Query: 61 LING 64
+I+G
Sbjct: 706 IIDG 709
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
M+++G+ D T LM+G + + A E+ M KG D FS+ LI+G S
Sbjct: 586 MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFS 641
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M +G P+ T ++DG+C + A +L M KG D+F ++
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740
Query: 61 LING 64
L++G
Sbjct: 741 LVDG 744
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M++ PD TCN LM+G CL + D+A +L S KG K D +++ LI
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLI 636
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS-HS 59
++EA G E + + G+ PD T N L+D +C A +A L+ M KG K D F+ ++
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459
Query: 60 ILIN 63
+L N
Sbjct: 460 VLYN 463
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + MI+R + P ST N L+ G C +R A + L KG D +++I+I+
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHA 568
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A ++ G DT +CN L+D FC + A EL MG KG + DA ++
Sbjct: 454 LDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGT 513
Query: 61 LING 64
LING
Sbjct: 514 LING 517
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA LA M+ + NAL+ GF A D+A +++ M + GC+ D +++I
Sbjct: 349 VDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNI 408
Query: 61 LIN 63
L+N
Sbjct: 409 LLN 411
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL E M++R + PD +C AL+ G C ++ D A EL M + + ++ LI
Sbjct: 316 EAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALI 375
Query: 63 NG 64
+G
Sbjct: 376 SG 377
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + M G PD T N L++ +C ++A +L+ M + G D +S++
Sbjct: 384 IDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQ 443
Query: 61 LING 64
L+ G
Sbjct: 444 LLKG 447
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ + M++ GVNPD + NAL++GFC R A L M SKG D ++ +
Sbjct: 415 VDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKL 474
Query: 61 LING 64
++ G
Sbjct: 475 IVGG 478
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + +I +G++PD C AL+ G C R D A EL+V + G K ++ ++ L
Sbjct: 171 DEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNAL 230
Query: 62 ING 64
I+G
Sbjct: 231 IDG 233
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L +I+ GV ++ NAL+DGFC R D+A ++ M GC D +++I
Sbjct: 205 VDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNI 264
Query: 61 LIN 63
L+N
Sbjct: 265 LLN 267
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVS-MGSKG-CKQDAFSH 58
+DEA L E M + GV PD + N L+ GFC A+ DRA ++V M +KG C +++
Sbjct: 275 VDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNT 334
Query: 59 SILINGGSARIRK 71
I + R RK
Sbjct: 335 VITAFCKARRTRK 347
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + MI GV PDT TCN L+ GFC ++ + A EL + D +++I
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 61 LING 64
+I+G
Sbjct: 543 IIHG 546
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS 48
EA L + M+ R + PDT T N+++ GFC +RFD A+ + M S
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++ G+ P T N L++G CL R A L+ M KG D ++ ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 63 NG 64
NG
Sbjct: 269 NG 270
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + +RG+ +T+T N L+ GFC D + A++L M S G D + +I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 61 LING 64
L+ G
Sbjct: 508 LLYG 511
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+++G+ P+ T N ++DGFC R+ A+ LL M + D + + LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 63 NG 64
+
Sbjct: 374 SA 375
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
+ +AN L M G PD ST N L+ G A D++ EL+ M S G DAF+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E++ ++ DT N ++ G C + D A +L S+ G + D ++++
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 61 LING 64
+I+G
Sbjct: 578 MISG 581
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
D+A + +LM +PD T N ++D +C A R D +LL + +G + +++
Sbjct: 417 FDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 61 LING 64
LI+G
Sbjct: 473 LIHG 476
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + GV PD T N ++ GFC A L M G + D +++
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 61 LING 64
LI G
Sbjct: 613 LIRG 616
>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
Length = 667
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G ++ G D +CN L+D FC A + A +L MG KG + DA ++
Sbjct: 458 LDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGT 517
Query: 61 LING 64
LING
Sbjct: 518 LING 521
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++RG+ PD C L+ G C +D+ D A EL + M S + + ++ LI
Sbjct: 319 EAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALI 378
Query: 63 NG 64
+G
Sbjct: 379 SG 380
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A +LM+ RG PD + N L+ C + D A ELL + KGC S++
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408
Query: 61 LING 64
+I+G
Sbjct: 409 VIDG 412
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + G P+T + N ++ G C A+R++ A EL+ MG KGC + + ++
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303
Query: 61 LIN 63
LI+
Sbjct: 304 LIS 306
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N +++G C R D A E L ++ S GC+ + S++I++
Sbjct: 211 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 270
Query: 63 NG 64
G
Sbjct: 271 KG 272
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 4 ANGLAEL--MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
AN LA L M++R PD T L++ C + +A +LL M KGC D +++++
Sbjct: 175 ANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 234
Query: 62 ING 64
+NG
Sbjct: 235 VNG 237
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E + + G P++ + N L+ FC + D+A L M S+GC D S++
Sbjct: 314 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 373
Query: 61 LING 64
L+
Sbjct: 374 LLTA 377
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
PD NA++ G+C A + D AR L+ M + DA++++ LI G R R
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGR 173
>gi|359493285|ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Vitis vinifera]
Length = 993
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E M+ +G NP+ N+L+DG+C + A LL+ + ++ K D F+ S LI
Sbjct: 727 DAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALI 786
Query: 63 NG 64
NG
Sbjct: 787 NG 788
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D GL E M +RG++P T N++++G C A R A E+ SKG DA + S
Sbjct: 279 IDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEV-----SKGIAGDAVTFST 333
Query: 61 LING 64
L++G
Sbjct: 334 LLHG 337
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G E M + G+ P+ T A+M GFC + D A L + + G + D F +
Sbjct: 209 VEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVT 268
Query: 61 LINGGSAR 68
LI+G R
Sbjct: 269 LIDGFCTR 276
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ + + + ++MIQ ++P+ T ++L+ G C+ +R D A ++L M SKGC + ++S
Sbjct: 204 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 263
Query: 61 LING 64
L NG
Sbjct: 264 LANG 267
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LMI +G P+ T + L +GF + R D +LL M +G + S +
Sbjct: 239 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 298
Query: 61 LING 64
LI G
Sbjct: 299 LIKG 302
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M++ G+ PD T ++L++GFCL++ A + M G K+D +ILI+
Sbjct: 74 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILID 126
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L + M QRGV +T +CN L+ G+ A + D A + M S G + S++I
Sbjct: 274 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 333
Query: 61 LING 64
++ G
Sbjct: 334 VLAG 337
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQR-GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
M EA L E MI++ + PD T N ++DGFC + ++AR + M C+ +AF+++
Sbjct: 263 MKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYA 322
Query: 60 ILING 64
LING
Sbjct: 323 TLING 327
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E M GV PD + AL+ C D +L++ M KGCK D ++++
Sbjct: 334 VENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNL 393
Query: 61 LING 64
L+ G
Sbjct: 394 LLEG 397
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M ++G+ PD T +L+DGF + R D A LL M GCK + ++S+L
Sbjct: 635 DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVL 694
Query: 62 ING 64
+ G
Sbjct: 695 LKG 697
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + M++ G +P++ T + L++G C R D A ++L M KG + +++++
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Query: 61 LING 64
I
Sbjct: 309 PITA 312
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + M++ G+NP+ + AL+DG + D A LL M GC + S++
Sbjct: 494 LESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNA 553
Query: 61 LINGGSARIR 70
+ING S R
Sbjct: 554 VINGLSKENR 563
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M+++G+ P+ T L+DG C R A ++ M + C + +++S LI
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 63 NG 64
G
Sbjct: 626 YG 627
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M + G NP+ + NA+++G +RF A ++ M +G + +++
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588
Query: 61 LING 64
LI+G
Sbjct: 589 LIDG 592
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A GL M++ G+ P+T T NAL++ C+ RF A ++ M G + +++
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 61 LING 64
+I G
Sbjct: 414 IIKG 417
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E MI++G+ P T + C + + A EL+ M +GC+ + +++
Sbjct: 284 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTA 343
Query: 61 LINGGS 66
LI+G S
Sbjct: 344 LISGLS 349
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + +LM+ +G P+ T +LM+G+C +R + A +LL KG D + +
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277
Query: 61 LING 64
+I+G
Sbjct: 278 IISG 281
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA G + M + G P+ + L+DG+CL + D AR + M SKGC + ++++ L
Sbjct: 184 NEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSL 243
Query: 62 ING 64
+NG
Sbjct: 244 MNG 246
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + MI GV PDT TCN L+ GFC ++ + A EL + D +++I
Sbjct: 478 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 537
Query: 61 LING 64
+I+G
Sbjct: 538 IIHG 541
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS 48
EA L + M+ R + PDT T N+++ GFC +RFD A+ + M S
Sbjct: 379 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 424
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E L + M++ G+ P T N L++G CL R A L+ M KG D ++
Sbjct: 202 MVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 261
Query: 61 LING 64
++NG
Sbjct: 262 IVNG 265
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + +RG+ +T+T N L+ GFC D + A++L M S G D + +I
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502
Query: 61 LING 64
L+ G
Sbjct: 503 LLYG 506
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+++G+ P+ T N ++DGFC R+ A+ LL M + D + + LI
Sbjct: 309 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 368
Query: 63 NG 64
+
Sbjct: 369 SA 370
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
+ +AN L M G PD ST N L+ G A D++ EL+ M S G DAF+
Sbjct: 583 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 639
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
D+A + +LM +PD T N ++D +C A R D +LL + +G + +++
Sbjct: 412 FDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467
Query: 61 LING 64
LI+G
Sbjct: 468 LIHG 471
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E++ ++ DT N ++ G C + D A +L S+ G + D ++++
Sbjct: 513 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 572
Query: 61 LING 64
+I+G
Sbjct: 573 MISG 576
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + GV PD T N ++ GFC A L M G + D +++
Sbjct: 548 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 607
Query: 61 LING 64
LI G
Sbjct: 608 LIRG 611
>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 603
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E + E+M+ RG PD T N L+ C + D A E+L + KG K D ++SI+
Sbjct: 412 NEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSII 471
Query: 62 ING 64
I+G
Sbjct: 472 IDG 474
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD T L+D C R +A +LL+ M SK CK + +++ LI G
Sbjct: 258 PDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKG 304
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSA 67
M+ + P+ T NAL+ G C R D L ++ S G + D S++I+++ S+
Sbjct: 286 MVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSS 342
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A+ M+QRG++ D LM+G+C A R A +L V M + G K D ++++
Sbjct: 331 MDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 390
Query: 61 LING 64
L++G
Sbjct: 391 LLDG 394
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L M + PD L+DG C A+ AREL M KG DA++++ LING
Sbjct: 421 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 480
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS--- 59
EA L + M+Q+G+ PD AL++G+C +A +LL M KG + D + S
Sbjct: 454 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSEVN 513
Query: 60 ILINGGSARIRK 71
I S +IRK
Sbjct: 514 IADEELSVKIRK 525
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + E M++ + PD T N L GFC + +LL M +G + ++ ++ I
Sbjct: 156 MQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGI 215
Query: 61 LING 64
I G
Sbjct: 216 AIVG 219
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + GV+P+ T N L+ C DR D AR++L M KGC D SH +++G
Sbjct: 95 MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 148
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + M+QRG+ P+ T ++D FC A A +L M S GC + + +
Sbjct: 185 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTA 244
Query: 61 LING 64
L+ G
Sbjct: 245 LVKG 248
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
L +M+Q G+ PD T NA++ +C + A LL M + C ++ +++ILI+
Sbjct: 472 LGRMMVQ-GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILIS 527
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A+ M+QRG++ D LM+G+C A R A +L V M + G K D ++++
Sbjct: 331 MDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 390
Query: 61 LING 64
L++G
Sbjct: 391 LLDG 394
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q+G+ PD AL++G+C +A +LL M KG + D + S+L
Sbjct: 454 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL- 512
Query: 63 NGGSARIRK 71
N S R RK
Sbjct: 513 NQSSLRSRK 521
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L M + PD L+DG C A+ AREL M KG DA++++ LING
Sbjct: 421 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 480
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + E M++ + PD T N L GFC + +LL M G + ++ ++ I
Sbjct: 156 MQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGI 215
Query: 61 LING 64
I G
Sbjct: 216 AIVG 219
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M G P++ TC LMDG C R D A ELL +M KG D +
Sbjct: 49 LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 108
Query: 61 LING 64
LI+G
Sbjct: 109 LISG 112
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M ++G + D L+ GFC DR +EL M KG + ++S
Sbjct: 84 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 143
Query: 61 LING 64
L++G
Sbjct: 144 LVHG 147
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL M ++ V+PD + N L++G C A + A LL+ M + GC ++ + + L+
Sbjct: 16 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 75
Query: 63 NG 64
+G
Sbjct: 76 DG 77
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN + M + G++PD T L+DG C R A +LL M KG + ++++L+
Sbjct: 156 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 215
Query: 63 NG 64
+G
Sbjct: 216 SG 217
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A GL M G+NP N LM C ++A+ L MG+ C+ D S +
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425
Query: 61 LING 64
+I+G
Sbjct: 426 MIDG 429
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L LM+++G P T N L+ G C A ++L M KG K D +++ L+ G
Sbjct: 195 LLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG 252
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M PD + N ++DG A F +EL + M G + DA + S
Sbjct: 401 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 460
Query: 61 LIN 63
LIN
Sbjct: 461 LIN 463
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-GSKGC-KQDAFSHSI 60
+A + +MI++G D T N LM G C + D A +L SM ++ C + + F+ ++
Sbjct: 226 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 285
Query: 61 LING 64
LI G
Sbjct: 286 LIGG 289
>gi|222623336|gb|EEE57468.1| hypothetical protein OsJ_07708 [Oryza sativa Japonica Group]
Length = 335
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A+ M+QRG++ D LM+G+C A R A +L V M + G K D ++++
Sbjct: 140 MDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 199
Query: 61 LING 64
L++G
Sbjct: 200 LLDG 203
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q+G+ PD AL++G+C +A +LL M KG + D + S+L
Sbjct: 263 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL- 321
Query: 63 NGGSARIRK 71
N S R RK
Sbjct: 322 NQSSLRSRK 330
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L M + PD L+DG C A+ AREL M KG DA++++ LING
Sbjct: 230 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 289
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G E M+ G++PD T ALM+G C R A+ LL M G K + +
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 61 LING 64
L++G
Sbjct: 354 LVDG 357
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A GL + M + G+ P NAL+DGFC + RAR + S+ +KG + +++
Sbjct: 679 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTA 738
Query: 61 LING 64
LI+G
Sbjct: 739 LIDG 742
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ L + MI+ G+ PDT T N LM G D A ELL M + G + +S+ I+IN
Sbjct: 402 ASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMIN 461
Query: 64 G 64
G
Sbjct: 462 G 462
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + +RG+ PD T + L+ G+C ++A +LL M + G K +A +++
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598
Query: 61 LING 64
L+ G
Sbjct: 599 LLEG 602
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + MI GV P+ + L+ G C + RA +LL M G + D F+++ L+
Sbjct: 366 EAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLM 425
Query: 63 NG 64
G
Sbjct: 426 QG 427
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M + V+PD N+L+ G R + A E + +G D F++S LI+G
Sbjct: 512 EKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHG 567
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 11 MIQRGVNPDTSTCNALMDGFC----LADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
++ +G+ P+ T AL+DG C + D FD +E+L +G DAF +++L G S
Sbjct: 724 ILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEML----DRGIAPDAFVYNVLATGCS 779
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ PD T + ++ C A FD A+++ M + C + +++++I+G
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 287
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ PD TCN LM+G CL R ++A +L S KG K D +++ LI
Sbjct: 586 MVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQA 639
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G E+M + G+ PD T N L+D C A +A L+ M G K D F+ +
Sbjct: 401 LEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNT 460
Query: 61 LI 62
L+
Sbjct: 461 LL 462
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA L + M Q G V+PD T N L+D R A LL M KG K +H+
Sbjct: 330 VDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHN 389
Query: 60 ILING 64
I++ G
Sbjct: 390 IIVKG 394
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + ++M++ + D NA+ DGFC R D A E+L +M +GCK +++
Sbjct: 199 LEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNC 258
Query: 61 LING 64
+ING
Sbjct: 259 IING 262
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFC-LADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA + + MIQRG P T N +++G C +R + A L M C +A ++
Sbjct: 234 VDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYG 293
Query: 60 ILINGGS 66
+I G S
Sbjct: 294 TMILGLS 300
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M R V P+ T N ++ G C RFD A ++ M C + + +
Sbjct: 377 VDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKV 436
Query: 61 LING 64
+ G
Sbjct: 437 MTMG 440
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + +I RGV+PD + N LM G C RF A+ L M + DA+ ++
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 61 LING 64
LI+G
Sbjct: 491 LIDG 494
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G + ++G+ P+ + L+ +C + +D A +LL+ M +GCK D ++ ILI+
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Query: 64 G 64
G
Sbjct: 424 G 424
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + L +++GV D NA++ GFC + D A + M + D F++S +
Sbjct: 502 DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 62 ING 64
I+G
Sbjct: 562 IDG 564
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ R + PD L+DGF + FD AR++ KG K D H+ +I G
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M+ R + PDT T N+L+DGFC R D A+ + M SKG + + +
Sbjct: 166 ISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINT 225
Query: 61 LINGGSARIRK 71
LI GG R ++
Sbjct: 226 LI-GGCCRAKR 235
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + +LM+ +G +P+ T N L+ G C A R D +LL M +G D+ S++
Sbjct: 201 LDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNT 260
Query: 61 LING 64
LI+G
Sbjct: 261 LIHG 264
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MI+ V+PD T NAL++ F + A EL M + D +++ LI
Sbjct: 133 DAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLI 192
Query: 63 NG 64
+G
Sbjct: 193 DG 194
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK 49
+D+ L M++RG+ PD+ + N L+ GFC A + A++L M S+
Sbjct: 236 VDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284
>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EAN ELMIQ G D + N L+ C + D A ELL M G + D ++ SI
Sbjct: 273 MQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKIDDAFELLNMMEEGGLESDEYTFSI 332
Query: 61 LING 64
L+NG
Sbjct: 333 LVNG 336
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M V PD T N LM G+C + + A++LL M +G K D S++
Sbjct: 478 IDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNT 537
Query: 61 LINGGSAR 68
LI+G S R
Sbjct: 538 LISGYSKR 545
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
GV P+ T N +++G+CL +F+ A ++ +M K K D ++++ I+
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFIS 295
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + I+ G+ PD NAL+DG C+ DRA +LL M + D + +
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502
Query: 61 LING 64
L+ G
Sbjct: 503 LMQG 506
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+G+ +++ G+ P+ T NAL+DG C D+A M ++G F++++
Sbjct: 303 IEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362
Query: 61 LING 64
LI+
Sbjct: 363 LIHA 366
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + M+ RG+ T N L+ L R + A +++ M KG + D +++I
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 61 LING 64
ING
Sbjct: 398 QING 401
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD 54
M +A + + M+ G +P T NAL+ G+ D A ELL M SKG D
Sbjct: 548 MKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPD 601
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + + P+ T ++LMDGFC RAR++L M K + + S+S
Sbjct: 271 VDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYST 330
Query: 61 LING 64
L+NG
Sbjct: 331 LLNG 334
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L M G PD+ T L++G C A+ELL M +KGC +++
Sbjct: 201 MDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTS 260
Query: 61 LING 64
+I+G
Sbjct: 261 IIHG 264
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + ELMIQ+ + P+ + + L++G C + + A E+ M +G K DA + ++N
Sbjct: 309 ARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVN 368
>gi|414865543|tpg|DAA44100.1| TPA: hypothetical protein ZEAMMB73_135273 [Zea mays]
Length = 542
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G+ + M++ GV P + A++ G+C R A LL +M GC D S+S+
Sbjct: 165 LDEAWGVLDSMLEVGVCPTVRSYTAILHGYCKQGRVLEAERLLDTMIQVGCAPDVISYSV 224
Query: 61 LING 64
LI G
Sbjct: 225 LIQG 228
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MIQ G PD + + L+ G C F + +L +KG +A +++I +
Sbjct: 202 EAERLLDTMIQVGCAPDVISYSVLIQGLCRVGEFGKVERILGESEAKGWTPNAVTYNIYM 261
Query: 63 NG 64
+
Sbjct: 262 SA 263
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M++RG+ P+ T NAL++G C ++ DRA+ L + KG + +++
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 824
Query: 61 LING 64
LI+G
Sbjct: 825 LIDG 828
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q G+ P T N L+ G C FD A ++ M +G D +S L+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 479
Query: 63 NG 64
+G
Sbjct: 480 DG 481
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + Q+G+ P+ T N L+DG+C D A +L M +G ++S
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859
Query: 61 LING 64
LING
Sbjct: 860 LING 863
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L + MI+ G++P T +AL++G C +R+ +LL M G +
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894
Query: 61 LING 64
L+ G
Sbjct: 895 LVQG 898
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G + M GV P+ T ++L++G+ + A+ +L M KG ++ ++++
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 61 LING 64
LI G
Sbjct: 302 LIKG 305
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M++ G+ + CN+L++G+C A ++ M K D++S++
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407
Query: 61 LING 64
L++G
Sbjct: 408 LLDG 411
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
MDEA + M + + PD L+DG+C + D A LL M G K + F +
Sbjct: 312 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 371
Query: 60 ILINGGSAR 68
LING R
Sbjct: 372 SLINGYCKR 380
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G+ M+ + PD+ + N L+DG+C A L M +G + +++
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNT 442
Query: 61 LING 64
L+ G
Sbjct: 443 LLKG 446
>gi|326487712|dbj|BAK05528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 455
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQR-GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
M EA L E MI++ + PD T N ++DGFC + ++AR + M C+ +AF+++
Sbjct: 254 MKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYA 313
Query: 60 ILING 64
LING
Sbjct: 314 TLING 318
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E M GV PD + AL+ C D +L++ M KGCK D ++++
Sbjct: 325 VENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNL 384
Query: 61 LING 64
L+ G
Sbjct: 385 LLEG 388
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + +I RGV+PD + N LM G C RF A+ L M + DA+ ++
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYAT 490
Query: 61 LING 64
LI+G
Sbjct: 491 LIDG 494
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + L +++GV D NA++ GFC + D A + M + D F++S +
Sbjct: 502 DEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 62 ING 64
I+G
Sbjct: 562 IDG 564
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ R + PD L+DGF + FD AR++ KG K D H+ +I G
Sbjct: 476 MLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKG 529
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL + ++G+ + L+ +C + +D A +LL+ + +GCK D ++ ILI+
Sbjct: 364 AAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIH 423
Query: 64 G 64
G
Sbjct: 424 G 424
>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A G M++RGVNPD T N L+ C A +FD A +L +M + G D S+ +
Sbjct: 314 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKV 373
Query: 61 LING 64
+I G
Sbjct: 374 IIQG 377
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+GL M + G +P+ + N L+ G C + D+A L ++ G K + + +I
Sbjct: 170 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNI 229
Query: 61 LING 64
+++
Sbjct: 230 IVHA 233
>gi|357130959|ref|XP_003567111.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Brachypodium distachyon]
Length = 389
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMG-SKGCKQDAFSHS 59
MD + L M++ G+ PDT + N L+ G+ + + A + MG S GC+ DAF++S
Sbjct: 194 MDTVSALFRQMLEEGIPPDTRSLNVLVRGYAQSLHLNDALRVFHQMGPSYGCEPDAFTYS 253
Query: 60 ILINGGSARIR 70
L++G S + R
Sbjct: 254 YLVHGLSEQGR 264
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+++G+ P+ T N+LMD A+ + A SM C + +++SI
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 746
Query: 61 LING 64
LING
Sbjct: 747 LING 750
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M G+ P+ T N ++D C A +F+ A E+ + +GC ++ ++
Sbjct: 407 VEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCS 466
Query: 61 LING 64
LI+G
Sbjct: 467 LIDG 470
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + + M Q+G D NA++DGFC + + D+A E+L M K ++ +I
Sbjct: 584 ETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSII 643
Query: 63 NG 64
+G
Sbjct: 644 DG 645
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M + V P +T +++DG DR D A L SKG + + +S
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676
Query: 61 LING 64
LI+G
Sbjct: 677 LIDG 680
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + MI GV PDT TCN L+ GFC ++ + A EL + D +++I
Sbjct: 267 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 326
Query: 61 LING 64
+I+G
Sbjct: 327 IIHG 330
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS 48
EA L + M+ R + PDT T N+++ GFC +RFD A+ + M S
Sbjct: 168 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 213
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + +RG+ +T+T N L+ GFC D + A++L M S G D + +I
Sbjct: 232 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 291
Query: 61 LING 64
L+ G
Sbjct: 292 LLYG 295
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+++G+ P+ T N ++DGFC R+ A+ LL M + D + + LI
Sbjct: 98 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 157
Query: 63 NG 64
+
Sbjct: 158 SA 159
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G+ P T N L++G CL R A L+ M KG D ++ ++NG
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 54
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E++ ++ DT N ++ G C + D A +L S+ G + D ++++
Sbjct: 302 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 361
Query: 61 LING 64
+I+G
Sbjct: 362 MISG 365
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
+ +AN L M G PD ST N L+ G A D++ EL+ M S G DAF+
Sbjct: 372 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 428
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
D+A + +LM +PD T N ++D +C A R D +LL + +G + +++
Sbjct: 201 FDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 256
Query: 61 LING 64
LI+G
Sbjct: 257 LIHG 260
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + GV PD T N ++ GFC A L M G + D +++
Sbjct: 337 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 396
Query: 61 LING 64
LI G
Sbjct: 397 LIRG 400
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E+M+ RG PD T N L+ C + D A E+L + SKGC +++
Sbjct: 400 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNT 459
Query: 61 LING 64
+I+G
Sbjct: 460 VIDG 463
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M + P T NA+M G C A + RA + L M KGCK +++I
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564
Query: 61 LING 64
LI G
Sbjct: 565 LIEG 568
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M ++G PD T N L++G C R D A + L +M GC+ + +H+I++
Sbjct: 262 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIIL 321
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M + G P++ + N L+ GFC + DRA E L M S+GC D +++ L+
Sbjct: 373 EKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 428
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + +QR PD T L++ C +A +LL M KGCK D ++++
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284
Query: 61 LING 64
LING
Sbjct: 285 LING 288
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E E MI +G PD C +L+ GFC + + +A ++ + + G D ++++
Sbjct: 123 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNV 182
Query: 61 LING 64
LI G
Sbjct: 183 LIGG 186
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA M G P+ T N ++ C R+ A LL M KGC + +I
Sbjct: 295 LDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNI 354
Query: 61 LIN 63
LIN
Sbjct: 355 LIN 357
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 3 EANGLAELMIQ---RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+A+ E++ Q +G +P T N ++DG + + A ELL M KG K D ++S
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYS 493
Query: 60 ILING 64
L+ G
Sbjct: 494 TLLRG 498
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G E M GV+P T N L+DGFC ++ RA E+L M +G + + +++ +
Sbjct: 63 EAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122
Query: 63 NG 64
+G
Sbjct: 123 HG 124
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G P T L+DG C A+R A EL+ MG +GC F ++++ NG
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGC----FPNALVFNG 50
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L E+M +RG P+ N +MD C R A + +M S G ++++
Sbjct: 26 LTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIVTYNL 85
Query: 61 LING 64
LI+G
Sbjct: 86 LIDG 89
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E M G++P+ T +LMDG C +R D+A E+ M +KG K D ++
Sbjct: 599 MDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 658
Query: 61 LING 64
LI+G
Sbjct: 659 LIHG 662
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M RG+ P+ + N +M C D AR + +M KG K + +++SI
Sbjct: 458 IDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSI 517
Query: 61 LING 64
LI+G
Sbjct: 518 LIDG 521
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+++G PD+ NAL+D + D A M +GC Q ++++I+I
Sbjct: 395 EAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMI 454
Query: 63 NG 64
NG
Sbjct: 455 NG 456
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L E M + G+ PD T +++ C + R D A E L G +A +S
Sbjct: 323 MGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSS 382
Query: 61 LING 64
LI+G
Sbjct: 383 LIDG 386
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E GV + ++L+DG A R A +L M KGC D++ ++
Sbjct: 358 LDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNA 417
Query: 61 LING 64
LI+
Sbjct: 418 LIDA 421
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A +LM+ RG PD + N L+ C + D A ELL + KGC S++
Sbjct: 351 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 410
Query: 61 LING 64
+I+G
Sbjct: 411 VIDG 414
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + G P+T + N ++ G C A+R++ A EL+ MG KGC + + ++
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305
Query: 61 LIN 63
LI+
Sbjct: 306 LIS 308
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N +++G C R D A E L ++ S GC+ + S++I++
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272
Query: 63 NG 64
G
Sbjct: 273 KG 274
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 4 ANGLAEL--MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
AN LA L M++R PD T L++ C + +A +LL M KGC D +++++
Sbjct: 177 ANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 236
Query: 62 ING 64
+NG
Sbjct: 237 VNG 239
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E + + G +P++ + N L+ FC + D+A L M S+GC D S++
Sbjct: 316 VEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 375
Query: 61 LING 64
L+
Sbjct: 376 LLTA 379
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G+ + MI G+ PD + N L+DG+C R D L M SKG K ++ I
Sbjct: 559 IEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGI 618
Query: 61 LING 64
+++G
Sbjct: 619 ILHG 622
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + + +I G PD T N+L+DG+ L + ++A +L +M S G + D S++ LI
Sbjct: 526 EAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLI 585
Query: 63 NG 64
+G
Sbjct: 586 DG 587
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E G+ M +G+ P+ TCN+ M C + A E SM +KG K + ++S+L+
Sbjct: 315 ETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLL 374
Query: 63 NG 64
+G
Sbjct: 375 HG 376
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M+Q+GV PD T +++D C A D+A +L M S G + + +++
Sbjct: 243 VSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNC 302
Query: 61 LINGGS 66
+I+G S
Sbjct: 303 MIHGYS 308
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M G P++ TC LMDG C R D A ELL +M KG D +
Sbjct: 195 LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 254
Query: 61 LING 64
LI+G
Sbjct: 255 LISG 258
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M ++G + D L+ GFC DR +EL M KG + ++S
Sbjct: 230 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 289
Query: 61 LING 64
L++G
Sbjct: 290 LVHG 293
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL M ++ V+PD + N L++G C A + A LL+ M + GC ++ + + L+
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 221
Query: 63 NG 64
+G
Sbjct: 222 DG 223
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN + M + G++PD T L+DG C R A +LL M KG + ++++L+
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 361
Query: 63 NG 64
+G
Sbjct: 362 SG 363
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A GL M G+NP N LM C ++A+ L MG+ C+ D S +
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 571
Query: 61 LING 64
+I+G
Sbjct: 572 MIDG 575
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L LM+++G P T N L+ G C A ++L M KG K D +++ L+
Sbjct: 337 HAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM 396
Query: 63 NG 64
G
Sbjct: 397 KG 398
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M PD + N ++DG A F +EL + M G + DA + S
Sbjct: 547 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 606
Query: 61 LIN 63
LIN
Sbjct: 607 LIN 609
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-GSKGC-KQDAFSHSI 60
+A + +MI++G D T N LM G C + D A +L SM ++ C + + F+ ++
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431
Query: 61 LING 64
LI G
Sbjct: 432 LIGG 435
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + +++++RG+ PD T +++G+C + AR++ M +G K D ++++
Sbjct: 624 MKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTV 683
Query: 61 LINGGS 66
+++G S
Sbjct: 684 VLDGHS 689
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M +RG+ PD T N L+ GF A ELL +G++G K ++ +H+ +I
Sbjct: 455 DAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRII 514
Query: 63 NG 64
G
Sbjct: 515 EG 516
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + MI RG+ PD T AL+ C DRA L+ M KG + D+ + S+
Sbjct: 744 LQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSV 803
Query: 61 LING 64
L G
Sbjct: 804 LHRG 807
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+EA + M + GVNP+ TC+ ++G C R D E L ++ + D F+++
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302
Query: 61 LINGGSARIR 70
+I G + ++
Sbjct: 303 VIRGFCSEMK 312
>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 408
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 20/87 (22%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG------------ 50
E + +M++ GV PD T N+LMDG+CL D+A+ + +M +G
Sbjct: 242 EGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRTMNLFQ 301
Query: 51 ---CKQ---DAFSHSILING--GSARI 69
CK+ D ++S LI+G S RI
Sbjct: 302 EMHCKEIIPDTIAYSSLIDGFCKSGRI 328
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ + V+PD T NA++ GFC+ R A L M + + D ++ +
Sbjct: 170 VDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNT 229
Query: 61 LING 64
L++
Sbjct: 230 LVSA 233
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 18/68 (26%)
Query: 1 MDEANGLAELMIQRGVN------------------PDTSTCNALMDGFCLADRFDRAREL 42
+D+A + M+QRGV PDT ++L+DGFC + R +A EL
Sbjct: 275 VDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALEL 334
Query: 43 LVSMGSKG 50
+ M +G
Sbjct: 335 VDEMHDRG 342
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M RG P+ T N+++ C ++ LL + KG + DA++++IL
Sbjct: 330 QALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILT 389
Query: 63 NG 64
NG
Sbjct: 390 NG 391
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L +M RGV PD + LMDG C A R + AR + M G DA ++S+
Sbjct: 265 LQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGVSPDAIAYSV 324
Query: 61 LING--GSARIRK 71
LI G R+R+
Sbjct: 325 LIAGYCNEQRVRE 337
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A G E + ++G PD T N L+ G+C + A L M +G + D SH++L
Sbjct: 231 ERAQGFLEELEEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVL 290
Query: 62 ING 64
++G
Sbjct: 291 MDG 293
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
+++A + + M+ GV+PD + L+ G+C R AR LL+ M G + F+
Sbjct: 300 LNDARRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSGLSSEGFA 356
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M+++GV P+ +T + L+DGFC R D A +LL M ++G +++IL+N
Sbjct: 175 MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLN 227
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M+++ +NP+ T N L++G C A R + A EL M KG S++
Sbjct: 60 VEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 119
Query: 61 LING 64
LI+G
Sbjct: 120 LIDG 123
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ L E M+ +G+ P T N L++ C AD+ + A +L M + C +++
Sbjct: 200 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 259
Query: 61 LI 62
L+
Sbjct: 260 LL 261
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A E M RG+ PD N ++ G C ++ + AR L M + + +++
Sbjct: 25 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 84
Query: 61 LING 64
LING
Sbjct: 85 LING 88
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + +LM+Q G P+ T N+LM+G+CL + A LL +M S G + + + + L+
Sbjct: 456 EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 515
Query: 63 NG 64
+G
Sbjct: 516 DG 517
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L MI++ V+PD T N+L+DG C ++ +L M G + + +++
Sbjct: 173 VDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNS 232
Query: 61 LINGGSA 67
LI G S
Sbjct: 233 LIYGYST 239
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + M G+ P+ L+DG+C R D A + M KG K + ++I
Sbjct: 489 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNI 548
Query: 61 LING 64
+++G
Sbjct: 549 ILHG 552
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G+ PD + N L+DGF D+A EL M + D +++ LI+G
Sbjct: 148 LLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDG 201
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+Q+G+ P+ T N L+DG A+ + A SM C + ++ I
Sbjct: 566 VDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCI 625
Query: 61 LINGGSARIRK 71
LIN G ++RK
Sbjct: 626 LIN-GLCKVRK 635
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L+ + G+ DT TCNAL+ G+C +A LL+ M GC+++ +S++ILI G
Sbjct: 204 LLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQG 258
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L I RG P T L++G+C A+R D A + +M S CK D ++ +
Sbjct: 369 LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGV 428
Query: 61 LIN 63
LIN
Sbjct: 429 LIN 431
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A GL + M RGV P T NA++DG+C + R A + M GC D ++++
Sbjct: 300 IHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS 359
Query: 61 LING 64
LI G
Sbjct: 360 LIYG 363
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A G+ LM Q G NPD T N+L+ G C + D A ELL ++G + +
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTN 393
Query: 61 LING 64
LING
Sbjct: 394 LING 397
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++++GV T +L+DGF A D A L+ M ++GCK D +++S+L+
Sbjct: 585 FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQA 639
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L MI G P +T + +C + + A L+ M G D ++ I
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIF 741
Query: 62 ING 64
ING
Sbjct: 742 ING 744
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L E M++ G+NP T ++++ GFC A R + A LL M K + +++LI
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLI 863
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG+ PD TCN+++DG C D+A E+L M K D +++ L++G
Sbjct: 147 MLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHG 200
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
N L + M+ G+ PD +TCN L+D C R + L M SK K D + +I+
Sbjct: 475 NTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E N L +LM+Q GV PD N + + R D A M +G D S+ +I
Sbjct: 279 EMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMI 338
Query: 63 NG 64
+G
Sbjct: 339 DG 340
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +LM V P+ + NA++ G+ LA + D +LL M S G K +A + + L+
Sbjct: 419 EAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLL 478
Query: 63 N 63
+
Sbjct: 479 D 479
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M + + PD +T N+L+ G+ + + A +L M G + ++S+
Sbjct: 172 MDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSM 231
Query: 61 LIN 63
LI+
Sbjct: 232 LID 234
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M+++GV P+ +T + L+DGFC R D A +LL M ++G +++IL+N
Sbjct: 280 MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLN 332
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M+++ +NP+ T N L++G C A R + A EL M KG S++
Sbjct: 165 VEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 224
Query: 61 LING 64
LI+G
Sbjct: 225 LIDG 228
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ L E M+ +G+ P T N L++ C AD+ + A +L M + C +++
Sbjct: 305 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 364
Query: 61 LI 62
L+
Sbjct: 365 LL 366
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A E M RG+ PD N ++ G C ++ + AR L M + + +++
Sbjct: 130 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 189
Query: 61 LING 64
LING
Sbjct: 190 LING 193
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M R PD T +++ C R D A + M ++G K DAF ++
Sbjct: 96 VEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154
Query: 61 LING 64
+++G
Sbjct: 155 VLSG 158
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + +I GV PD + L+DG+CL + D + +LL M S G + D ++S L+
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477
Query: 63 NG 64
NG
Sbjct: 478 NG 479
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDE+ L M+ G+ PD T +AL++G+C R D A L M SK K +A +++I
Sbjct: 451 MDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNI 510
Query: 61 LING 64
+++G
Sbjct: 511 ILHG 514
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI RG++P+ N +MD C R A + + G K D S++ILI+G
Sbjct: 391 MINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDG 444
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G+ PD T + L+D +C R AR + SM +G DA+++
Sbjct: 206 LEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRT 265
Query: 61 LINGGSAR 68
L++G + +
Sbjct: 266 LLHGYATK 273
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDA 55
+D+A L M+ +G P+ T N+++DG C A D+A +L M KG ++A
Sbjct: 155 VDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+ R + PDT T L+DGFC + A LL M KG D +++
Sbjct: 615 LDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTC 674
Query: 61 LING 64
L+NG
Sbjct: 675 LLNG 678
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMG--------------------SKG 50
M+++ + P +T AL+DG+C R D AR +L M + G
Sbjct: 360 MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADG 419
Query: 51 CKQDAFSHSILING 64
D ++S LING
Sbjct: 420 IDPDVITYSALING 433
>gi|147862833|emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera]
Length = 488
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E M++ G+ PD+ TCN L+ C R A +L + SKG D + +IL
Sbjct: 277 EEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANKLRLLASSKGLDSDGMTFNIL 336
Query: 62 INGGS 66
+NG S
Sbjct: 337 VNGYS 341
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
+ E MI+ V PD T N+L+ C +F A E+ M KGC + S + LI GS
Sbjct: 107 VYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIK-GS 165
Query: 67 ARIRK 71
R RK
Sbjct: 166 FRDRK 170
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+E G+A M++ G TC L+DG C R A +LL+ KG + F +
Sbjct: 171 FEEGIGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEACDLLIYFSGKGALPNGFDYFC 230
Query: 61 LING 64
LI
Sbjct: 231 LIEA 234
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + G+ P+ T N++M G C + + DRA + LV M ++GCK + S++I
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 61 LING 64
LI G
Sbjct: 560 LIEG 563
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L + M RG PD T N L++G C R D A + L M S GC+ + +H+I++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M Q G P++ + N L+ GFC + DRA E L M S+GC D +++ ++
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E M+ RG PD T N ++ C + + A E+L + SKGC +++
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 61 LING 64
+I+G
Sbjct: 455 VIDG 458
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M+QR PD T L++ C A +LL M +GC D ++++
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 61 LING 64
L+NG
Sbjct: 280 LVNG 283
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E E M+ G PD C L+ GFC + +A ++L + G D ++++
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 61 LING 64
+I+G
Sbjct: 178 MISG 181
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G E M GV+P T N L+DGFC ++ RA E+L M +G + + +++ +
Sbjct: 63 EAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122
Query: 63 NG 64
+G
Sbjct: 123 HG 124
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L E+M +RG P+ N +MD C R A + +M S G +++I
Sbjct: 26 LTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIVTYNI 85
Query: 61 LING 64
LI+G
Sbjct: 86 LIDG 89
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G P T L+DG C A+R A EL+ M +GC F ++++ NG
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGC----FPNALVFNG 50
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + GV P+ T N++M G C + DRA + LV M ++GCK S++I
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559
Query: 61 LING 64
LI G
Sbjct: 560 LIEG 563
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M RG PD T N L++G C R D A + L M S GC+ + +H+I++
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M + G P++ + N L+ GFC + DRA E L M S+GC D +++ ++
Sbjct: 366 ILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E M+ RG PD T N ++ C + + A E+L + SKGC +++
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 61 LING 64
+I+G
Sbjct: 455 VIDG 458
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M+QR PD T L++ C +A +LL M +GC D ++++
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279
Query: 61 LING 64
L+NG
Sbjct: 280 LVNG 283
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E E M+ G PD C L+ GFC + +A ++L + G D ++++
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177
Query: 61 LING 64
+I+G
Sbjct: 178 MISG 181
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M++RG+ P+ T NAL++G C ++ DRA+ L + KG + +++
Sbjct: 731 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 790
Query: 61 LING 64
LI+G
Sbjct: 791 LIDG 794
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+Q G+ P T N L+ G C FD A ++ M +G D +S L+
Sbjct: 386 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 445
Query: 63 NG 64
+G
Sbjct: 446 DG 447
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G + M GV P+ T ++L++G+ + A+ +L M KG ++ ++++
Sbjct: 208 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 267
Query: 61 LING 64
LI G
Sbjct: 268 LIKG 271
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M++ G+ + CN+L++G+C A ++ M K D++S++
Sbjct: 314 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 373
Query: 61 LING 64
L++G
Sbjct: 374 LLDG 377
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
MDEA + M + + PD L+DG+C + D A LL M G K + F +
Sbjct: 278 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 337
Query: 60 ILINGGSAR 68
LING R
Sbjct: 338 SLINGYCKR 346
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ M+ + PD+ + N L+DG+C A L M +G + +++ L+
Sbjct: 351 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 410
Query: 63 NG 64
G
Sbjct: 411 KG 412
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M++RGV PD + N LM+G C R A+ LLV M + DAF +
Sbjct: 431 VDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSAT 490
Query: 61 LING 64
L++G
Sbjct: 491 LVDG 494
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L EL I +G++P NA++ G+C + A + M D F++S
Sbjct: 501 LDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYST 560
Query: 61 LING 64
+I+G
Sbjct: 561 IIDG 564
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E I+RG++P+ + L+ +C + RA +L + M KG D ++ L+
Sbjct: 363 EAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALV 422
Query: 63 NG 64
+G
Sbjct: 423 HG 424
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M ++ + PD T N LM G CL R D AR+L+ M +G + D +++ LI+G S +
Sbjct: 423 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMK 480
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++RGV +T N L+ + R A EL+ MG KG D F+++ILING
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILING 336
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +RG+ PD T N L+ G+ + A + M +KG +++
Sbjct: 448 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 507
Query: 61 LING 64
LI G
Sbjct: 508 LIQG 511
>gi|110742004|dbj|BAE98941.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 497
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M + PD T N L++G+C + +FD A +L M KGC+ + S +
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 61 LING 64
LI G
Sbjct: 269 LIRG 272
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A+G E M+ G+ PD+ T N L+ C +D A L + SKG + D ++ +L
Sbjct: 385 EKASGFMEKMMNAGILPDSVTFNLLLGDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 62 INGGSARIRK 71
++G + R+
Sbjct: 445 VSGFTKEGRR 454
>gi|79568177|ref|NP_181166.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206301|sp|Q9SJN2.1|PP187_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36240
gi|4510352|gb|AAD21441.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254126|gb|AEC09220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 497
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M + PD T N L++G+C + +FD A +L M KGC+ + S +
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 61 LING 64
LI G
Sbjct: 269 LIRG 272
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A+G E M+ G+ PD+ T N L+ C +D A L + SKG + D ++ +L
Sbjct: 385 EKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 62 INGGSARIRK 71
++G + R+
Sbjct: 445 VSGFTKEGRR 454
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M++ PD TCN LM+G CL + D+A +L S KG K D +++ LI
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLI 632
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E M+Q+G PDT T L+DGF A + D AR+LL M +KG + A ++
Sbjct: 194 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 253
Query: 61 LING 64
+++G
Sbjct: 254 IVHG 257
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L ++M+ +G P T +++ GFC D + A+E++ M +GC+ F +
Sbjct: 229 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 288
Query: 61 LIN 63
L++
Sbjct: 289 LLS 291
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + ELM + GV PD N+LMDG+ +R D+A + M + G K +A + ++
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428
Query: 61 LING 64
L++G
Sbjct: 429 LMHG 432
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++ GVNPD +AL+ G + D A ++ M +GC + ++ +L
Sbjct: 512 EAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLR 571
Query: 63 NGGSARIR 70
G A R
Sbjct: 572 RGFRAAGR 579
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + M RG PD +L+D R AR + SM KGC DA ++ +
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359
Query: 62 INGGS 66
I S
Sbjct: 360 IQNFS 364
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHS 59
+D+A G+ + M+ G+ P+ T N LM G + DRA L M K S++
Sbjct: 404 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYT 463
Query: 60 ILING 64
ILI+G
Sbjct: 464 ILIDG 468
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + MI++G PD T ++ F + A E+L M G D F+++ L+
Sbjct: 336 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 395
Query: 63 NG 64
+G
Sbjct: 396 DG 397
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L + M ++G+ PD T +L+DGF + R D A LL M GCK + ++S+L
Sbjct: 677 DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVL 736
Query: 62 ING 64
+ G
Sbjct: 737 LKG 739
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + M++ G +P++ T + L++G C R D A ++L M KG + +++++
Sbjct: 291 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 350
Query: 61 LING 64
I
Sbjct: 351 PITA 354
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M + G NP+ + NA+++G +RF A ++ M +G + +++
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630
Query: 61 LING 64
LI+G
Sbjct: 631 LIDG 634
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + M++ G+NP+ + L+DG + D A LL M GC + S++
Sbjct: 536 LESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNA 595
Query: 61 LINGGSARIR 70
+ING S R
Sbjct: 596 VINGLSKENR 605
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A GL M++ G+ P+T T NAL++ C+ RF A ++ M G + +++
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455
Query: 61 LING 64
+I G
Sbjct: 456 IIKG 459
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E MI++G+ P T + C + + A EL+ M +GC+ + +++
Sbjct: 326 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTA 385
Query: 61 LINGGS 66
LI+G S
Sbjct: 386 LISGLS 391
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M ++G+ P+ T L+DG C R A ++ M + C + +++S LI
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667
Query: 63 NG 64
G
Sbjct: 668 YG 669
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L + M++R + P T N +++G+C A D+A ELL M G D +++
Sbjct: 514 MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573
Query: 61 LING 64
LI+G
Sbjct: 574 LISG 577
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L E M+ G+ PDT T L+ G C R A++ + + K K + +S
Sbjct: 549 MDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSA 608
Query: 61 LING--GSARI 69
L++G G R+
Sbjct: 609 LLHGYCGQGRL 619
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK 52
L + M+++GV PD+ N L+ G C+ D+A EL M S+G K
Sbjct: 834 LWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLK 879
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ GV PD TC+A++ C F RA+E ++ M S ++++LI+G
Sbjct: 210 VNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHG 262
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L M+ +G+ +T+T N L+ GFC R A ++L M G D ++S
Sbjct: 759 MKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYST 817
Query: 61 LI 62
+I
Sbjct: 818 II 819
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M ++ + PD T N LM G CL R D AR+L+ M +G + D +++ LI+G S +
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMK 367
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++RGV +T N L+ + R A EL+ MG KG D F+++ILING
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 223
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +RG+ PD T N L+ G+ + A + M +KG +++
Sbjct: 335 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 394
Query: 61 LING 64
LI G
Sbjct: 395 LIQG 398
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M +G+ PD T N L++G C +A E+ +M +G + +++ LI
Sbjct: 197 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLI 256
Query: 63 NGGSAR 68
S +
Sbjct: 257 YALSKK 262
>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
Length = 548
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + +L+I G P+ T N+L+DG+CL A LL SM S G + D ++++ L+
Sbjct: 246 EGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 305
Query: 63 NG 64
+G
Sbjct: 306 DG 307
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA GL + M GV PD T N L+DG+C R D A L M K + S++I
Sbjct: 279 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 338
Query: 61 LING 64
+++G
Sbjct: 339 ILHG 342
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A+ L L I G PD T +++G+C + A EL M +G DA +++I
Sbjct: 597 MEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTI 656
Query: 61 LING 64
+ING
Sbjct: 657 MING 660
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L + M +RG+ PD T +++G+C + A EL M +G K D ++++
Sbjct: 632 LPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTV 691
Query: 61 LING 64
+I G
Sbjct: 692 IIKG 695
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFD-RARELLVSMGSKGCKQDAFSHSIL 61
EA L + M +RG PD N L GF +R D A +LL M S+G + ++ +H I+
Sbjct: 453 EAQSLFKEMEERGFKPDVVAYNVLAAGF-FRNRTDFEAMDLLNYMESQGVEPNSTTHKII 511
Query: 62 ING 64
I G
Sbjct: 512 IEG 514
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M ++G+ PD AL+ G+C + FD+A + SM S+G K + S
Sbjct: 311 LDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSC 370
Query: 61 LIN 63
+++
Sbjct: 371 ILH 373
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M ++ + PD T N LM G CL R D AR+L+ M +G + D +++ LI+G S +
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 440
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++RGV +T N L+ + R A EL+ MG KG D F+++ILING
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 296
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +RG+ PD T N L+ G+ + A + M +KG +++
Sbjct: 408 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 467
Query: 61 LING 64
LI G
Sbjct: 468 LIQG 471
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M +G+ PD T N L++G C +A E+ +M +G + +++ LI
Sbjct: 270 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 329
Query: 63 NGGSAR 68
S +
Sbjct: 330 YALSKK 335
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
MI+ G+ PDT N ++DG A+ D A +L SM S GC D ++++ILI
Sbjct: 75 MIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILI 126
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L+ + G+ DT TCNAL+ G+C +A LL+ M GC+++ +S++ILI G
Sbjct: 204 LLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQG 258
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L I RG P T L++G+C A+R D A + +M S CK D ++ +
Sbjct: 369 LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGV 428
Query: 61 LIN 63
LIN
Sbjct: 429 LIN 431
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A GL + M RGV P T NA++DG+C + R A + M GC D ++++ LI
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361
Query: 63 NG 64
G
Sbjct: 362 YG 363
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A G+ LM Q G NPD T N+L+ G C + D A ELL ++G + +
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTN 393
Query: 61 LING 64
LING
Sbjct: 394 LING 397
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L MI G P +T + +C R + A L+ M G D +++I
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIF 741
Query: 62 ING 64
ING
Sbjct: 742 ING 744
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++++GV T +L+DGF A D A L+ M ++GCK D +++S+L+
Sbjct: 585 FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQA 639
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA M G+ P+ T +++DG+C A E+ M +GC +A+++
Sbjct: 439 LKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGS 498
Query: 61 LING 64
LI G
Sbjct: 499 LIYG 502
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L E M++ G+NP T ++++ GFC A R + A LL M K + +++LI
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 863
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L E M +G+NPD T N L+DG C A +RA+ L + +G + +++
Sbjct: 651 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 710
Query: 61 LING 64
+++G
Sbjct: 711 MVDG 714
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+ +G+ PD T + L++GFC+ R A+ +L+ M G K + +++
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 325
Query: 61 LING 64
LI+G
Sbjct: 326 LIDG 329
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M+++GV PD+ T + L++G C RA ELL M + ++S+
Sbjct: 371 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 430
Query: 61 LING 64
+ING
Sbjct: 431 IING 434
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA G+ + ++G+ P+ T N+L+ G C D+A +LL M KG D +++I
Sbjct: 616 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675
Query: 61 LING 64
LI+G
Sbjct: 676 LIDG 679
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G +P+ T N ++ G C A D A EL SM KG D +++ ILING
Sbjct: 241 MGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILING 294
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E+ + E M ++G+ PD N+L+ GFC A R + AR L+ M + + +A ++
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535
Query: 61 LINGGS 66
I+G S
Sbjct: 536 FIDGYS 541
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M+ G+ + N L++G C A + ++A E++ M KG + D+ ++S+
Sbjct: 336 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 395
Query: 61 LING 64
LI G
Sbjct: 396 LIEG 399
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
RG+ P+ T A++DG+C + A +LL M +G DAF +++++N
Sbjct: 699 RGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 748
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M V PD T ++ C A+ +L+ MG KGC + +++++I GG R R
Sbjct: 206 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVII-GGLCRAR 264
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+ +I
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 61 LI 62
L+
Sbjct: 537 LL 538
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 501
Query: 61 LING 64
L+NG
Sbjct: 502 LLNG 505
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 409 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 469 HGYSTQLK 476
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + M RG+ PD + M FC R A LL +M S+GC+ + ++ +
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 62 ING 64
+ G
Sbjct: 188 VGG 190
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + +I +G PD T N L+ G C +F A L + ++G + D+F+++
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNT 326
Query: 61 LING 64
LI G
Sbjct: 327 LIAG 330
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+D+A GL E M + VNPD T L+DGFC D A L M
Sbjct: 547 LDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G P+ T N L++ C + D+A LL M +K DA + LI+G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDG 575
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ G+ PD+ T N L+ G+C A +LV+ G D F++ LI+G
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDG 365
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L + +I+RGV P+ T N + G C D A ++ + +G K D +++ LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLI 293
Query: 63 NG 64
G
Sbjct: 294 YG 295
>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1025
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+ R + PDT T L+DGFC + A LL M KG D +++
Sbjct: 541 LDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTC 600
Query: 61 LING 64
L+NG
Sbjct: 601 LLNG 604
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK 52
M+++ + P +T AL+DG+C R D AR +L M G +
Sbjct: 360 MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVR 401
>gi|297727723|ref|NP_001176225.1| Os10g0497400 [Oryza sativa Japonica Group]
gi|255679531|dbj|BAH94953.1| Os10g0497400, partial [Oryza sativa Japonica Group]
Length = 104
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ P+T T + L++G+C R + A L M S G D +++I
Sbjct: 11 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 70
Query: 61 LING 64
++ G
Sbjct: 71 ILQG 74
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M +G PD NALM G A + A LL M GC+ D SH+I
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 61 LING 64
++NG
Sbjct: 555 ILNG 558
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E + G+ PD T N L+ F A F+ A ++ M KG + DA ++S +++
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
>gi|413951210|gb|AFW83859.1| hypothetical protein ZEAMMB73_953172 [Zea mays]
Length = 598
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M +G PD T + L+ G C AD+ + AR++L M ++GC D + ++L
Sbjct: 350 DEAAEIVQTMKAQGHQPDNVTYSQLVYGLCKADKLEDARKVLDEMEAEGCVPDLKTWTLL 409
Query: 62 ING 64
I+G
Sbjct: 410 IHG 412
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M G PD T L+ G CLA DRA + L M KG DA +
Sbjct: 384 LEDARKVLDEMEAEGCVPDLKTWTLLIHGCCLAGDVDRAVQYLTEMIEKGLDADANLLDV 443
Query: 61 LING 64
++ G
Sbjct: 444 ILKG 447
>gi|296081510|emb|CBI20033.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E M++ G+ PD+ TCN L+ C R A +L + SKG D + +IL
Sbjct: 373 EEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANKLRLLASSKGLDSDGMTFNIL 432
Query: 62 INGGS 66
+NG S
Sbjct: 433 VNGYS 437
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
+ E MI+ V PD T N+L+ C +F A E+ M KGC + S + LI GS
Sbjct: 203 VYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIK-GS 261
Query: 67 ARIRK 71
R RK
Sbjct: 262 FRERK 266
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+E G+A M++ G TC L+DG C R A +LL+ KG + F +
Sbjct: 267 FEEGVGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEAFDLLIDFSGKGALPNGFDYFC 326
Query: 61 LING 64
LI
Sbjct: 327 LIEA 330
>gi|212722066|ref|NP_001132329.1| uncharacterized protein LOC100193771 [Zea mays]
gi|194694094|gb|ACF81131.1| unknown [Zea mays]
Length = 502
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M +G PD T + L+ G C AD+ + AR++L M ++GC D + ++L
Sbjct: 254 DEAAEIVQTMKAQGHQPDNVTYSQLVYGLCKADKLEDARKVLDEMEAEGCVPDLKTWTLL 313
Query: 62 ING 64
I+G
Sbjct: 314 IHG 316
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M G PD T L+ G CLA DRA + L M KG DA +
Sbjct: 288 LEDARKVLDEMEAEGCVPDLKTWTLLIHGCCLAGDVDRAVQYLTEMIEKGLDADANLLDV 347
Query: 61 LING 64
++ G
Sbjct: 348 ILKG 351
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL + M G+ P+ T NAL++GFC ARE+L +G +G + + +
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 61 LING 64
LI+
Sbjct: 410 LIDA 413
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L +M+ GV P+ ST N L+ GFC AR+L M G K D +++I
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 61 LING 64
L++
Sbjct: 480 LVDA 483
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ L + M+ + ++P+ T N L+DGFC + A+++ M +G + + +++
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339
Query: 61 LING 64
LING
Sbjct: 340 LING 343
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + E M ++G+ P+ T N+L++G C + D A L M G K + +++ LIN
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377
Query: 64 G 64
G
Sbjct: 378 G 378
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M G +P T N ++DG+C A + +A LL M +K + + +ILI
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
Query: 63 NG 64
+G
Sbjct: 307 DG 308
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ NG E M + G PD T N L++G+C R + A L MG +G + S+S L
Sbjct: 280 DKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSAL 339
Query: 62 ING 64
+NG
Sbjct: 340 MNG 342
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L ++M RGV P+ + +ALM+G C + A +L M +G D S++
Sbjct: 314 LEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNT 373
Query: 61 LING 64
LI+G
Sbjct: 374 LISG 377
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCL-ADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA+ L M+QRG++PD + N L+ G+C + R LL M G + D +
Sbjct: 349 IKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCR 408
Query: 60 ILING 64
I+ G
Sbjct: 409 IVFQG 413
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L E M +G+NPD T N L+DG C A +RA+ L + +G + +++
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701
Query: 61 LING 64
+++G
Sbjct: 702 MVDG 705
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+ +G+ PD T + L++GFC+ R A+ +L+ M G K + +++
Sbjct: 257 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 316
Query: 61 LING 64
LI+G
Sbjct: 317 LIDG 320
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M+++GV PD+ T + L++G C RA ELL M + ++S+
Sbjct: 362 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 421
Query: 61 LING 64
+ING
Sbjct: 422 IING 425
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA G+ + ++G+ P+ T N+L+ G C D+A +LL M KG D +++I
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666
Query: 61 LING 64
LI+G
Sbjct: 667 LIDG 670
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E+ + E M ++G+ PD N+L+ GFC A R + AR L+ M + + +A ++
Sbjct: 467 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526
Query: 61 LINGGS 66
I+G S
Sbjct: 527 FIDGYS 532
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M+ G+ + N L++G C A + ++A E++ M KG + D+ ++S+
Sbjct: 327 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 386
Query: 61 LING 64
LI G
Sbjct: 387 LIEG 390
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
RG+ P+ T A++DG+C + A +LL M +G DAF +++++N
Sbjct: 690 RGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 739
>gi|225456224|ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77405-like [Vitis vinifera]
Length = 432
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L +M+ +G PD T N L+DG C R +RA EL M +GC + +++ I
Sbjct: 258 EANHLFRIMLFKGFVPDVVTYNCLIDGCCKTYRIERALELFDDMNKRGCVPNRVTYNSFI 317
Query: 63 NGGSA 67
SA
Sbjct: 318 RYYSA 322
>gi|225447824|ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 480
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E M++ G+ PD+ TCN L+ C R A +L + SKG D + +IL
Sbjct: 372 EEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANKLRLLASSKGLDSDGMTFNIL 431
Query: 62 INGGS 66
+NG S
Sbjct: 432 VNGYS 436
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
+ E MI+ V PD T N+L+ C +F A E+ M KGC + S + LI GS
Sbjct: 202 VYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIK-GS 260
Query: 67 ARIRK 71
R RK
Sbjct: 261 FRERK 265
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+E G+A M++ G TC L+DG C R A +LL+ KG + F +
Sbjct: 266 FEEGVGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEAFDLLIDFSGKGALPNGFDYFC 325
Query: 61 LING 64
LI
Sbjct: 326 LIEA 329
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M +G PD NALM G A + A LL M GC+ D SH+I
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 61 LING 64
++NG
Sbjct: 555 ILNG 558
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E + G+ PD T N L+ F A F+ A ++ M KG + DA ++S +++
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA L E M+ + + PD T N L++GFC + DRAR ++ M + GC + F++S
Sbjct: 325 LKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYS 384
Query: 60 ILING 64
L++G
Sbjct: 385 ALVDG 389
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + E M G P+ +AL+DG C A + A+ +L M S G K DA +++ L
Sbjct: 362 DRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSL 421
Query: 62 IN 63
IN
Sbjct: 422 IN 423
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A G+ M G+ PD T +L++ F + D A ELL M C+ D + ++
Sbjct: 396 LQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNV 455
Query: 61 LING 64
++ G
Sbjct: 456 ILGG 459
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M + DT T N ++ G C RFD A +++ + +G + S+ I
Sbjct: 431 IDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRI 490
Query: 61 LIN 63
++N
Sbjct: 491 VLN 493
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL + M G+ P+ T NAL++GFC ARE+L +G +G + + +
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 61 LING 64
LI+
Sbjct: 410 LIDA 413
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L +M+ GV P+ ST N L+ GFC AR+L M G K D +++I
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 61 LING 64
L++
Sbjct: 480 LVDA 483
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ L + M+ + ++P+ T N L+DGFC + A+++ M +G + + +++
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339
Query: 61 LING 64
LING
Sbjct: 340 LING 343
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + E M ++G+ P+ T N+L++G C + D A L M G K + +++ LIN
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377
Query: 64 G 64
G
Sbjct: 378 G 378
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M G +P T N ++DG+C A + +A LL M +K + + +ILI
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
Query: 63 NG 64
+G
Sbjct: 307 DG 308
>gi|357451329|ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
LM+ G++PD T + + C ADR D A EL+ + SK C D +S++ L+
Sbjct: 169 LMVSDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLV 221
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L E M +G +P+T T N L+ G C + FD+A EL +M S G K D S++ +
Sbjct: 361 ALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFV 419
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L +++ + G PD N +M G+C+ R A E+ M KG + D +++
Sbjct: 253 LREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNT 312
Query: 61 LINGGSARIR 70
LI G S R
Sbjct: 313 LIFGLSKSGR 322
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L +M ++G PD T +LM+G C A LL M KGC + +++
Sbjct: 323 VSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNT 382
Query: 61 LING 64
L++G
Sbjct: 383 LLHG 386
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M ++GV PD T N L+ G + R A++LL M KG D +++ L+
Sbjct: 290 EAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLM 349
Query: 63 NG 64
NG
Sbjct: 350 NG 351
>gi|449445824|ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
gi|449487417|ref|XP_004157616.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
Length = 486
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A G M+ V PD T N L+ G+C +F +A EL M KGC + S + L
Sbjct: 201 DKALGFYSRMLSDRVKPDVYTFNILISGYCRNSQFVQALELFKEMREKGCSPNVISFNTL 260
Query: 62 ING 64
I G
Sbjct: 261 IKG 263
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E M++ G+ PD+ T N+L+ C + A +L + SKG + D ++
Sbjct: 375 VNDAMNVTERMLEVGMIPDSVTFNSLLQDLCNVRKTVEANKLRLLASSKGFEPDNKTYYT 434
Query: 61 LING 64
L++G
Sbjct: 435 LVSG 438
>gi|242046988|ref|XP_002461240.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
gi|241924617|gb|EER97761.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
Length = 551
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 3 EANGLAELMIQRGVNPDT-----------------------STCNALMDGFCLADRFDRA 39
EA L E M++RGV PD +CN L+D FC A + A
Sbjct: 321 EAVELWEEMMRRGVKPDIISCGVLIFGLCKNHMEVGGFCDIVSCNILIDAFCKAKKVTSA 380
Query: 40 RELLVSMGSKGCKQDAFSHSILING 64
+L MG KG + DA ++ LING
Sbjct: 381 LKLFKEMGYKGIQADAVTYGTLING 405
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+ R + PDT T L+DGFC + A LL M KG D +++
Sbjct: 665 LDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTC 724
Query: 61 LING 64
L+NG
Sbjct: 725 LLNG 728
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++ + P +T AL+DG+C R D AR +L M G + ++S L+NG
Sbjct: 360 MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNG 413
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + + R ++ + + L+DGFC +A+++L M + G D ++S LING
Sbjct: 426 LIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALING 483
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ E M GV PD T +LMD C R AR++L SM +G K + ++S L+
Sbjct: 294 EAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLL 353
Query: 63 NGGSAR 68
+G + +
Sbjct: 354 HGYATK 359
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M++RG+ PD T N ++ C A D+A ++L M G D +++ +
Sbjct: 223 DKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSI 282
Query: 62 ING 64
++G
Sbjct: 283 VHG 285
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV PD T N+++ G+C + + A +L M S G + DA +++
Sbjct: 257 MDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTS 316
Query: 61 LIN 63
L++
Sbjct: 317 LMD 319
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + MI+RG+ P+ T + L+ G+ R+LL M G + D SILI
Sbjct: 329 EARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILI 388
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ E M GV PD T +LMD C R AR++L SM +G K + ++S L+
Sbjct: 294 EAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLL 353
Query: 63 NGGSAR 68
+G + +
Sbjct: 354 HGYATK 359
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M++RG+ PD T N ++ C A D+A ++L M G D +++ +
Sbjct: 223 DKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSI 282
Query: 62 ING 64
++G
Sbjct: 283 VHG 285
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV PD T N+++ G+C + + A +L M S G + DA +++
Sbjct: 257 MDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTS 316
Query: 61 LIN 63
L++
Sbjct: 317 LMD 319
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M QRG++PDT NAL+ GFC D+AR L + + C + +++I
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTI 416
Query: 61 LING 64
LI G
Sbjct: 417 LICG 420
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + + M Q+G+ P+T ++ G C A R D LL +M GC D+ + + L
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 62 ING 64
++G
Sbjct: 278 LDG 280
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ + L M G PD+ TCNAL+DGFC + D A LL +G +S L
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312
Query: 62 ING 64
I+G
Sbjct: 313 IDG 315
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DE M + G+ PD L+ GFC D A +L M +G D + ++ L
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382
Query: 62 ING 64
I G
Sbjct: 383 IKG 385
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV PD T N L++GFC A + A +L + KG D+ ++ LI+G
Sbjct: 524 GVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDG 573
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+DEA + M G +P T NAL+DG C A + AR L M
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LM++ G PD T N+L+ G+C ++ D AR+L M +G QD S++ LI G
Sbjct: 178 LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEG 232
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + ELM RG P+ T NAL+ GFC + +A LL M + G DA ++++
Sbjct: 340 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399
Query: 61 LING 64
LI G
Sbjct: 400 LIRG 403
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L + + RG+ P+ T N+L++G C + + D A + L M S GC D +++S
Sbjct: 446 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 505
Query: 62 I 62
I
Sbjct: 506 I 506
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M ++G+ P TC A+++ +C R A +L M +GCK + ++++ L+
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 366
Query: 63 NG 64
G
Sbjct: 367 QG 368
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSA 67
M+ G NPD T M +C+ R + A +L+ M G D +++ L++G ++
Sbjct: 560 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 616
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L LM G+ D T NAL++ C R D+A L S+ ++G K +A + +
Sbjct: 410 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 469
Query: 61 LING 64
LING
Sbjct: 470 LING 473
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GVNPD T N L+ G C+ + A LL M G D ++++ LIN
Sbjct: 389 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 438
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
LM+ G++PD T + + C ADR D A EL+ + SK C D +S++ L+
Sbjct: 153 LMVSDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLV 205
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L E M +G +P+T T N L+ G C + FD+A EL +M S G K D S++ +
Sbjct: 358 ALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFV 416
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L +++ + G PD N +M G+C+ R A E+ M KG + D +++
Sbjct: 250 LREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNT 309
Query: 61 LINGGSARIR 70
LI G S R
Sbjct: 310 LIFGLSKSGR 319
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L +M ++G PD T +LM+G C A LL M KGC + +++
Sbjct: 320 VSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNT 379
Query: 61 LING 64
L++G
Sbjct: 380 LLHG 383
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M ++GV PD T N L+ G + R A++LL M KG D +++ L+
Sbjct: 287 EAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLM 346
Query: 63 NG 64
NG
Sbjct: 347 NG 348
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L+ + G+ DT TCNAL+ G+C +A LL+ M GC+++ +S++ILI G
Sbjct: 208 LLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQG 262
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M +RGV P T NA++DG+C + R A + M GC D ++++
Sbjct: 304 IHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNS 363
Query: 61 LING 64
LI+G
Sbjct: 364 LIHG 367
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L I RG +P T +++G+C A++ D A + M S CK D ++ +L
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVL 433
Query: 62 IN 63
I+
Sbjct: 434 IS 435
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A G+ LM G NPD T N+L+ G C + D A ELL ++G + +
Sbjct: 339 LKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTN 397
Query: 61 LING 64
+ING
Sbjct: 398 IING 401
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L E+M Q G+ PD N L D C + R + A LV KG +++ L
Sbjct: 549 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---KKGVVLTKVTYTSL 605
Query: 62 INGGS 66
++G S
Sbjct: 606 VDGFS 610
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +M+Q G +P+ T L+ G C R AR LL M +G ++++ +I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330
Query: 63 NG 64
+G
Sbjct: 331 DG 332
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++++GV T +L+DGF A + A L+ M ++GCK D+ ++S+L+
Sbjct: 589 FLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQA 643
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M++ G+NP T ++++ GFC A R + A LL M K + +++
Sbjct: 806 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTM 865
Query: 61 LI 62
LI
Sbjct: 866 LI 867
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + MI G P T + +C R + A L+ M G D ++++
Sbjct: 686 DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVF 745
Query: 62 ING 64
ING
Sbjct: 746 ING 748
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M QRG++PDT NAL+ GFC D+AR L + + C + +++I
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTI 416
Query: 61 LING 64
LI G
Sbjct: 417 LICG 420
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + + M Q+G+ P+T ++ G C A R D LL +M GC D+ + + L
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 62 ING 64
++G
Sbjct: 278 LDG 280
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ + L M G PD+ TCNAL+DGFC + D A LL +G +S L
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312
Query: 62 ING 64
I+G
Sbjct: 313 IDG 315
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DE M + G+ PD L+ GFC D A +L M +G D + ++ L
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382
Query: 62 ING 64
I G
Sbjct: 383 IKG 385
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+DEA + M G +P T NAL+DG C A + AR L M
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M Q+G++PD NA++ G+C + A E + +M G D F+++
Sbjct: 555 LDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTT 614
Query: 61 LING 64
LI G
Sbjct: 615 LIGG 618
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L E M+++ V+PD L+DGF + D AR++ M KG D ++
Sbjct: 520 LPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNA 579
Query: 61 LING 64
+I G
Sbjct: 580 MIKG 583
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA+ L + M+ G+ PD+ + N L+ GFC D D+ E M S+ KQD S++
Sbjct: 719 EEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAF 778
Query: 62 ING 64
++G
Sbjct: 779 VDG 781
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L + MI+RG PD T N + +C + + LL M S+G K D ++
Sbjct: 508 MDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567
Query: 61 LING 64
+I+G
Sbjct: 568 IIDG 571
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M+ GV D T N ++ G C A + D A +L M +G K D F+ +I
Sbjct: 473 MKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNI 532
Query: 61 LIN 63
++
Sbjct: 533 FLH 535
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E L + M G+ PD T ++DG+C A +A E L + G + +A ++
Sbjct: 543 VEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNA 602
Query: 61 LING 64
LI G
Sbjct: 603 LIGG 606
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 8 AELMIQ---RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
AE+ Q +G+ + +T NAL+ G C + A ++L +M + G + D +++I+I G
Sbjct: 442 AEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQG 501
>gi|195616298|gb|ACG29979.1| hypothetical protein [Zea mays]
Length = 577
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M +G PD T + L+ G C AD+ + AR++L M ++GC D + ++L
Sbjct: 329 DEAAEIVQTMKAQGHQPDNVTYSQLVYGLCKADKLEDARKVLDEMEAEGCVPDLKTWTLL 388
Query: 62 ING 64
I+G
Sbjct: 389 IHG 391
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M G PD T L+ G CLA DRA + L M KG DA +
Sbjct: 363 LEDARKVLDEMEAEGCVPDLKTWTLLIHGCCLAGDVDRAVQYLTEMIEKGLDADANLLDV 422
Query: 61 LING 64
++ G
Sbjct: 423 ILKG 426
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L ++M ++G P+ T A++DGF + + + ELL MGSKG + ++ +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 62 IN 63
I+
Sbjct: 821 ID 822
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DGFC + R + AR+LL +M +GC+ + + LI+G
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G P+ +AL+DG C + D A+E+ M G +++S
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 61 LIN 63
LI+
Sbjct: 715 LID 717
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ + M++ P+ ++DG C + D A +L+ M KGC+ + +++ +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 62 ING 64
I+G
Sbjct: 786 IDG 788
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L ++M ++G P+ T A++DGF + + + ELL MGSKG + ++ +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 62 IN 63
I+
Sbjct: 821 ID 822
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DGFC + R + AR+LL +M +GC+ + + LI+G
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G P+ +AL+DG C + D A+E+ M G +++S
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 61 LIN 63
LI+
Sbjct: 715 LID 717
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ + M++ P+ ++DG C + D A +L+ M KGC+ + +++ +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 62 ING 64
I+G
Sbjct: 786 IDG 788
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L ++M ++G P+ T A++DGF + + + ELL MGSKG + ++ +L
Sbjct: 720 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 779
Query: 62 IN 63
I+
Sbjct: 780 ID 781
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DGFC + R + AR+LL +M +GC+ + + LI+G
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 642
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G P+ +AL+DG C + D A+E+ M G +++S
Sbjct: 614 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 673
Query: 61 LIN 63
LI+
Sbjct: 674 LID 676
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ + M++ P+ ++DG C + D A +L+ M KGC+ + +++ +
Sbjct: 685 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 744
Query: 62 ING 64
I+G
Sbjct: 745 IDG 747
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M +G PD+ N L+DG A R D A L M GC Q ++++I
Sbjct: 438 VDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDGCDQTVYTYTI 497
Query: 61 LING 64
+I+G
Sbjct: 498 IIDG 501
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA +++G+ + +L+DGF A D+A+EL M KG D++ +++
Sbjct: 403 LDEAILCFRNCVEKGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNV 462
Query: 61 LING 64
LI+G
Sbjct: 463 LIDG 466
>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 376
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G+NP T + LM G CL + ++A +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK +A ++
Sbjct: 110 IDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M ++G P+ T N+++ GFC+A +F A LL M S+GC + +S
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYST 437
Query: 61 LIN 63
L+N
Sbjct: 438 LVN 440
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A E M + G+ P NAL++G+C R D AREL+ M +K K D ++S
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 61 LING 64
+I+G
Sbjct: 262 IISG 265
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M+Q GV PD T L+DG C ++A L M KG D ++S+
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 367 LINGLSKSAR 376
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M+++GV PD T ++L+ G C R + A EL +M G + D F+++
Sbjct: 272 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 331
Query: 61 LING 64
LI+G
Sbjct: 332 LIDG 335
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L M + V PD T + ++ G+C D A +L M KG DA ++S
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296
Query: 61 LING 64
LI G
Sbjct: 297 LIRG 300
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ PD T +L+ C A ++A L+ M +G + + + + LI+G
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 195
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A E M + G+ P NAL++G+C R D AREL+ M +K K D ++S
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 61 LING 64
+I+G
Sbjct: 404 IISG 407
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M+Q GV PD T L+DG C ++A L M KG D ++S+
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 509 LINGLSKSAR 518
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M+++GV PD T ++L+ G C R + A EL +M G + D F+++
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473
Query: 61 LING 64
LI+G
Sbjct: 474 LIDG 477
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L M + V PD T + ++ G+C D A +L M KG DA ++S
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 61 LING 64
LI G
Sbjct: 439 LIRG 442
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ PD T +L+ C A ++A L+ M +G + + + + LI+G
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337
>gi|18420848|ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g24830
gi|22655280|gb|AAM98230.1| putative protein [Arabidopsis thaliana]
gi|30725398|gb|AAP37721.1| At5g24830 [Arabidopsis thaliana]
gi|332005984|gb|AED93367.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 593
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A G M++RGVNPD T N L+ C +FD A +L +M + G D S+ +
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 61 LING 64
+I G
Sbjct: 376 IIQG 379
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+GL M + G +P+ + N L+ G C + D+A L +M G + + + +I
Sbjct: 172 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 61 LING 64
+++
Sbjct: 232 IVHA 235
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E+MI RG++ DT T N +DG C + A L + M S G + D +++ LI
Sbjct: 495 EAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLI 554
Query: 63 NGGSARIR 70
+ R R
Sbjct: 555 HAHCERGR 562
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
G+ P T N L+DG+C + AR M +GC+ D +++IL+N GS ++R
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMN-GSRKVR 456
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK--GCKQDAFSHS 59
D+ + M+Q G+ P T N L+D F R D+A +LL M ++ GC +++
Sbjct: 213 DDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYN 272
Query: 60 ILING 64
++ING
Sbjct: 273 VVING 277
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M+++G PD ST LM+G RE M SKG + D F+++
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482
Query: 61 LING 64
I+
Sbjct: 483 RISA 486
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++RG++P+ T L+DG C ++ A L M G D +H+ L G
Sbjct: 643 MLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG 696
>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 376
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G+NP T + LM G CL + ++A +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK +A ++
Sbjct: 110 IDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
>gi|26449752|dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
Length = 593
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A G M++RGVNPD T N L+ C +FD A +L +M + G D S+ +
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 61 LING 64
+I G
Sbjct: 376 IIQG 379
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+GL M + G +P+ + N L+ G C + D+A L +M G + + + +I
Sbjct: 172 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 61 LING 64
+++
Sbjct: 232 IVHA 235
>gi|242095134|ref|XP_002438057.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
gi|241916280|gb|EER89424.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
Length = 499
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
M EA L E MI++ + PD N ++DGFC + D+AR + M C+ +AF+++
Sbjct: 239 MMEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYA 298
Query: 60 ILING 64
LING
Sbjct: 299 TLING 303
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E M GV PD + AL+ C D A L++ M KGC+ D ++++
Sbjct: 310 IEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKGCRADVVTYNL 369
Query: 61 LING 64
+I G
Sbjct: 370 VIEG 373
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M Q+G D T N +++G C R A +LL S+ +G K + S+ I
Sbjct: 345 VDEAINLVLEMKQKGCRADVVTYNLVIEGLCRDGRTVEAMDLLESVPLEGVKLNVASYRI 404
Query: 61 LIN 63
L+N
Sbjct: 405 LMN 407
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L M ++G NP+ T A++DGF + + ++ EL M SKGC + ++ +L
Sbjct: 738 DEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVL 797
Query: 62 IN 63
IN
Sbjct: 798 IN 799
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L + M+ G P+ +A++DGFC + A+E+ M +G + +++S I
Sbjct: 634 EAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFI 693
Query: 63 N 63
+
Sbjct: 694 D 694
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DG C A+R A ELL +M + GC+ + + +I+G
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDG 660
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M + G+ P T L+D FC A +AR+ M KGC + +++
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535
Query: 61 LING 64
LI+
Sbjct: 536 LIHA 539
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ P+ ++DG C + D A +L++ M KGC + +++ +I+G
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG 765
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PDT N ++ G C A F+ A ++L M S C + ++ IL++G
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSG 323
>gi|242058669|ref|XP_002458480.1| hypothetical protein SORBIDRAFT_03g034460 [Sorghum bicolor]
gi|241930455|gb|EES03600.1| hypothetical protein SORBIDRAFT_03g034460 [Sorghum bicolor]
Length = 387
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS-KGCKQDAFSHS 59
MD L M++ G+ PDT T N L+ G+ + + A L M GC+ DAF++S
Sbjct: 200 MDNVTALFRQMLEEGIPPDTRTLNVLIRGYAQSLHLNDALRLFHQMRPLYGCEPDAFTYS 259
Query: 60 ILINGGSARIR 70
L++G SA+ R
Sbjct: 260 YLVHGLSAQGR 270
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E MI +G+ P T + L+DG C R + A+ LLV M S G D ++S+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 61 LING 64
LI+G
Sbjct: 318 LIDG 321
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M++ G+ P+ N L+ GFC + ++A+ELL M KG +A ++
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 61 LING 64
+I+G
Sbjct: 703 IIDG 706
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M+ +G+ D T LM+G D+ D A E+ M KG D FS+ +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 63 NGGS 66
NG S
Sbjct: 635 NGFS 638
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G+ PD N+L+ G A R D AR LV M G K +AF++ I+G
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M +G++P+ T ++DG+C + A L M KG D+F ++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 61 LING 64
L++G
Sbjct: 738 LVDG 741
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + +LM+Q+G P T T N +++G C DR D A ++ M KG K DA +++ L+
Sbjct: 308 DAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367
Query: 63 NG--GSARIRK 71
G G+ +I +
Sbjct: 368 KGLCGAGKIHE 378
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSH 58
MD+A G+ E+M+++G PD T N L+ G C A + A +L + S+ K D F+
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400
Query: 59 SILING 64
+ LI G
Sbjct: 401 NNLIQG 406
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSILIN 63
V PD T N L++GFC A R AR L +M G C+ + ++S+LI+
Sbjct: 145 VVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLID 193
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++R V+P+ T + LM G R+ A E+L M ++G + D ++++L +G
Sbjct: 246 MLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADG 299
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + + M RGV PD L DG C R A ++L M KG + ++++++
Sbjct: 273 EASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVV 332
Query: 63 NG 64
NG
Sbjct: 333 NG 334
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MDEANGLAELMIQRG--VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+ EA L +L++ V PD TCN L+ G C R A + SM G + + ++
Sbjct: 376 IHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTY 435
Query: 59 SILING 64
+ LI G
Sbjct: 436 NFLIEG 441
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL M G+ P NALM C D ++AR L M + D S +I+I+
Sbjct: 486 ARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIID 545
Query: 64 G 64
G
Sbjct: 546 G 546
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E MI +G+ P T + L+DG C R + A+ LLV M S G D ++S+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 61 LING 64
LI+G
Sbjct: 318 LIDG 321
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M++ G+ P+ N L+ GFC + ++A+ELL M KG +A ++
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 61 LING 64
+I+G
Sbjct: 703 IIDG 706
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M+ +G+ D T LM+G D+ D A E+ M KG D FS+ +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 63 NGGS 66
NG S
Sbjct: 635 NGFS 638
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G+ PD N+L+ G A R D AR LV M G K +AF++ I+G
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M +G++P+ T ++DG+C + A L M KG D+F ++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 61 LING 64
L++G
Sbjct: 738 LVDG 741
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E MI +G+ P T + L+DG C R + A+ LLV M S G D ++S+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 61 LING 64
LI+G
Sbjct: 318 LIDG 321
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M++ G+ P+ N L+ GFC + ++A+ELL M KG +A ++
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 61 LING 64
+I+G
Sbjct: 703 IIDG 706
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M+ +G+ D T LM+G D+ D A E+ M KG D FS+ +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 63 NGGS 66
NG S
Sbjct: 635 NGFS 638
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G+ PD N+L+ G A R D AR LV M G K +AF++ I+G
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M +G++P+ T ++DG+C + A L M KG D+F ++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 61 LING 64
L++G
Sbjct: 738 LVDG 741
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + +L+I G P+ T N+L+DG+CL A LL SM S G + D ++++ L+
Sbjct: 452 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 511
Query: 63 NG 64
+G
Sbjct: 512 DG 513
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA GL + M GV PD T N L+DG+C R D A L M K + S++I
Sbjct: 485 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 544
Query: 61 LING 64
+++G
Sbjct: 545 ILHG 548
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G+ PD + NAL+DGF D+A +L M +G + ++S LING
Sbjct: 144 LLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLING 197
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD++ + E M ++GVNPD T + ++ FC R D A E M G D +S
Sbjct: 344 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 403
Query: 61 LINGGSAR 68
LI G R
Sbjct: 404 LIQGQCNR 411
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L M ++G+ P+ T ++L++G C D+A +L M G + + +++
Sbjct: 169 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 228
Query: 61 LINGGSA 67
LI+G S
Sbjct: 229 LIHGYST 235
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD CN+ M C R AR++ SM KG K D S+ L++G
Sbjct: 256 PDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHG 302
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M+Q+GV PD T N+++D C A D+A +L M KG + D +++
Sbjct: 248 VSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNA 307
Query: 61 LINGGS 66
+I+G S
Sbjct: 308 IIHGYS 313
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A G+ + M+ G+ PD T N L+ G+C + + D L M K K +++I
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623
Query: 61 LING 64
+++G
Sbjct: 624 VLDG 627
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + L+I G P T N+L+DG+CL + ++A +L +M S G + D +++ L+
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590
Query: 63 NG 64
+G
Sbjct: 591 SG 592
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ + M +G+ PDT T ++ M C R A E+ M +KG D S+SIL+
Sbjct: 320 ESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILL 379
Query: 63 NG 64
+G
Sbjct: 380 HG 381
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
MD+A + M+ +GV PD T NA++ G+ + + + ++ M SKG D + S
Sbjct: 283 MDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFS 341
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQ------DAFSHSILING 64
MI G+ P+T+ ++L+ GFC+ +A+E + M SKG + + HS+ I G
Sbjct: 468 MISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+ +G++PD T + L+ GFC+ + +RA +LL M + D ++++I
Sbjct: 214 VDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTI 273
Query: 61 LING 64
L++
Sbjct: 274 LVDA 277
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + +M++ VN D + LMDG+CL + + A+ + +M G D +SI+I
Sbjct: 286 EAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMI 345
Query: 63 NG 64
NG
Sbjct: 346 NG 347
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+ RG PD T N L+D C DRA L M + + + ++ +IL++G
Sbjct: 395 LFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDG 452
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G P+T T N LM G CL + A + ++G + S+ ILING
Sbjct: 119 ILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILING 172
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M + + P+ T L+DG C R A E + +KG + ++++
Sbjct: 424 LDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTV 483
Query: 61 LING 64
+ING
Sbjct: 484 MING 487
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E + Q+ + PDT T +L+D C + R +L M +G D +++
Sbjct: 354 VDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNN 413
Query: 61 LING 64
LI+
Sbjct: 414 LIDA 417
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + M ++G NPD + CN ++D C R A E+L M + C+ D +++
Sbjct: 273 LSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNS 332
Query: 61 LI 62
LI
Sbjct: 333 LI 334
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M +R PD +T N+L+ C RF++ ELL M KGC +A ++ L+
Sbjct: 318 MNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLL 369
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + M ++G NPD + CN ++D C R A E+L M + C+ D +++
Sbjct: 310 LSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNS 369
Query: 61 LI 62
LI
Sbjct: 370 LI 371
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M +R PD +T N+L+ C RF++ ELL M KGC +A ++ L+
Sbjct: 355 MNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLL 406
>gi|293332247|ref|NP_001170072.1| uncharacterized protein LOC100383988 [Zea mays]
gi|224033255|gb|ACN35703.1| unknown [Zea mays]
gi|414880495|tpg|DAA57626.1| TPA: hypothetical protein ZEAMMB73_709118 [Zea mays]
Length = 384
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS-KGCKQDAFSHS 59
MD + L M++ G+ PDT T N L+ G+ + + A L M GC+ DAF++S
Sbjct: 197 MDNVSALFRQMLEEGIPPDTRTLNVLIRGYAQSLHLNDALRLFHQMRPLYGCEPDAFTYS 256
Query: 60 ILINGGSARIR 70
L++G SA+ R
Sbjct: 257 YLVHGLSAQGR 267
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + M ++G NPD + CN ++D C R A E+L M + C+ D +++
Sbjct: 310 LSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNS 369
Query: 61 LI 62
LI
Sbjct: 370 LI 371
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M +R PD +T N+L+ C RF++ ELL M KGC +A ++ L+
Sbjct: 355 MNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLL 406
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+GL E M RG+ PDT T N+++DG+ R D M S C+ D +++
Sbjct: 149 IEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNT 208
Query: 61 LIN 63
LIN
Sbjct: 209 LIN 211
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M+ GV P+ ++ AL+ GF A DRA ELL M +G K D +
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383
Query: 61 LI 62
I
Sbjct: 384 FI 385
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A LA+ M Q GV + T AL+DG C +R A EL M + G + S++
Sbjct: 289 LSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTA 348
Query: 61 LING 64
LI+G
Sbjct: 349 LIHG 352
>gi|255660982|gb|ACU25660.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 350
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G+NP T + LM G CL + ++A +L + SKG K D H+ILI
Sbjct: 191 EAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILI 250
Query: 63 NG 64
+G
Sbjct: 251 HG 252
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 49 VDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSA 108
Query: 61 LING 64
+ING
Sbjct: 109 MING 112
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK +A ++
Sbjct: 84 IDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNT 143
Query: 61 LING 64
LING
Sbjct: 144 LING 147
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 119 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 178
Query: 61 LING 64
LING
Sbjct: 179 LING 182
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + +L+I G P+ T N+L+DG+CL A LL SM S G + D ++++ L+
Sbjct: 523 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 582
Query: 63 NG 64
+G
Sbjct: 583 DG 584
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA GL + M GV PD T N L+DG+C R D A L M K + S++I
Sbjct: 556 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 615
Query: 61 LING 64
+++G
Sbjct: 616 ILHG 619
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G+ PD + NAL+DGF D+A +L M +G + ++S LING
Sbjct: 215 LLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLING 268
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD++ + E M ++GVNPD T + ++ FC R D A E M G D +S
Sbjct: 415 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 474
Query: 61 LINGGSAR 68
LI G R
Sbjct: 475 LIQGQCNR 482
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L M ++G+ P+ T ++L++G C D+A +L M G + + +++
Sbjct: 240 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 299
Query: 61 LINGGSA 67
LI+G S
Sbjct: 300 LIHGYST 306
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD CN+ M C R AR++ SM KG K D S+ L++G
Sbjct: 327 PDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHG 373
>gi|242049502|ref|XP_002462495.1| hypothetical protein SORBIDRAFT_02g026770 [Sorghum bicolor]
gi|241925872|gb|EER99016.1| hypothetical protein SORBIDRAFT_02g026770 [Sorghum bicolor]
Length = 294
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + +L + GV+P+ N LMDG+CL + +A ++ +M S G + + ++S L+
Sbjct: 119 EAQDIFDLTVSIGVHPNVMVYNTLMDGYCLVHKMKKALKVFDAMVSVGIEPNVVTYSTLV 178
Query: 63 NG 64
NG
Sbjct: 179 NG 180
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+QRG++P+ T N+++ C A DRA +L M KG + D +++
Sbjct: 28 VNKACDLFNEMVQRGISPNLVTYNSVVHALCKARAVDRAEAILRPMVGKGVRPDRMTYNN 87
Query: 61 LI 62
LI
Sbjct: 88 LI 89
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E M++RG D+ NAL+D + + + A L M +GC Q ++++I
Sbjct: 451 VDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTI 510
Query: 61 LING 64
LI+G
Sbjct: 511 LISG 514
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+EA L +LMI +G+ P T++ AL G CL+ + RA ++L + G
Sbjct: 522 EEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMG 570
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E V + ++L+DG A R D A + M +GC QD++ ++
Sbjct: 416 LDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNA 475
Query: 61 LING 64
LI+
Sbjct: 476 LIDA 479
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E + + E M ++G PDT T N L++GFC+ + + A +L M KG K D S++++
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 62 INGGSARIRK 71
+ G RI+K
Sbjct: 335 L-GVFFRIKK 343
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ AN + + M+++G+ PD + N ++ F +++ A L M +GC D S+ I+
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 62 ING 64
+G
Sbjct: 370 FDG 372
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK 52
+EA L E M +RG +PDT + + DG C +F+ A +L M KG K
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK 395
>gi|255546664|ref|XP_002514391.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546488|gb|EEF47987.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 313
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L LM Q+G P+ A++DGFC A + D A+ + M G +AFS+++
Sbjct: 158 VQEAMKLFGLMRQKGTIPEVVVYTAVVDGFCKAHKTDDAKRIFKKMIDNGITPNAFSYTV 217
Query: 61 LING 64
I G
Sbjct: 218 TIQG 221
>gi|48525335|gb|AAT44969.1| At2g36240 [Arabidopsis thaliana]
gi|50198948|gb|AAT70477.1| At2g36240 [Arabidopsis thaliana]
Length = 379
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M + PD T N L++G+C + +FD A +L M KGC+ + S +
Sbjct: 91 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 150
Query: 61 LING 64
LI G
Sbjct: 151 LIRG 154
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A+G E M+ G+ PD+ T N L+ C +D A L + SKG + D ++ +L
Sbjct: 267 EKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 326
Query: 62 INGGSARIRK 71
++G + R+
Sbjct: 327 VSGFTKEGRR 336
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK--GCKQDAFSHS 59
D+ + M+Q GV P T N L+D FC A R D+A LL M ++ GC + +++
Sbjct: 211 DDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYN 270
Query: 60 ILING 64
++ING
Sbjct: 271 VVING 275
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M+ RG++ DT T N L+DG C A L + M + G + D +++ LI+
Sbjct: 497 LREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHC 556
Query: 67 ARIR 70
R R
Sbjct: 557 ERGR 560
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P T N L+DG+C + AR L M + C D +++IL+NG
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNG 449
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + +M++ GV P T N LMDG+CL + +A+ +L + ++ S++I
Sbjct: 279 IKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNI 338
Query: 61 LING 64
+ING
Sbjct: 339 MING 342
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + + G+ P+ T N L+DG C + A+++ + KG +A++++I
Sbjct: 419 VDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNI 478
Query: 61 LING 64
+ING
Sbjct: 479 MING 482
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A GL MI + + P T ++L+ GFC+ +F A L M K DA++ +IL+
Sbjct: 211 DAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILV 270
Query: 63 NG 64
+
Sbjct: 271 DA 272
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M RG+ P T N+L+DG C A R A EL+ M + D +++
Sbjct: 349 VDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNS 408
Query: 61 LIN 63
LI+
Sbjct: 409 LID 411
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ + +NPD T N L+D C + A+ ++ M +G + +++ L++G
Sbjct: 254 MVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDG 307
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M ++ + PD T N LM G CL R D AR+L+ M +G + D +++
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 807 LISGYSMK 814
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M++RGV +T N L+ + R A EL+ MG KG D F+++I
Sbjct: 607 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 666
Query: 61 LING 64
LING
Sbjct: 667 LING 670
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +RG+ PD T N L+ G+ + A + M +KG +++
Sbjct: 782 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 841
Query: 61 LING 64
LI G
Sbjct: 842 LIQG 845
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M +G+ PD T N L++G C +A E+ +M +G + +++ LI
Sbjct: 644 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 703
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MI+ + P+ T +L++GFC+ D AR++ M +KGC D +++ LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 63 NG 64
NG
Sbjct: 325 NG 326
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + LM +G PD +L++GFC + D A ++ M KG + +++
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 61 LING 64
LI G
Sbjct: 358 LIQG 361
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L M +R + PD T NAL+D F +F A EL M + F+++ LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 63 NG 64
NG
Sbjct: 290 NG 291
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M++ G PD T +L++GFCL +R + A ++ M G K D ++ +I+
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + M++ G+ PD ++D C + A L M + G + D ++
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 61 LING 64
L+NG
Sbjct: 218 LVNG 221
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G+NP T + LM G CL + + A +L + KG K D H+ILI
Sbjct: 217 EAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + MI+ G P+T NAL+ G A + D A + MG+ C + ++SI
Sbjct: 145 LEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSI 204
Query: 61 LING 64
LI+G
Sbjct: 205 LIDG 208
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + ELM + G D+ T L+ GFC +++ +L KG DAF++S
Sbjct: 75 VEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+IN
Sbjct: 135 MINA 138
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ +T + L+DG C +RF A +L+ M KG ++S+L+ G
Sbjct: 197 PNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKG 243
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A +LM+ RG PD + N L+ C + D A ELL + KGC S++
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282
Query: 61 LING 64
+I+G
Sbjct: 283 VIDG 286
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + G P+T + N ++ G C A+R++ A EL+ MG KGC + + ++
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 61 LIN 63
LI+
Sbjct: 178 LIS 180
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N +++G C R D A E L ++ S GC+ + S++I++
Sbjct: 85 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 144
Query: 63 NG 64
G
Sbjct: 145 KG 146
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 4 ANGLAEL--MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
AN LA L M++R PD T L++ C + +A +LL M KGC D +++++
Sbjct: 49 ANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 108
Query: 62 ING 64
+NG
Sbjct: 109 VNG 111
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E + + G P++ + N L+ FC + D+A L M S+GC D S++ L+
Sbjct: 196 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M ++GV+P+ T NAL++G C + D+A + M +KG + ++++ILIN
Sbjct: 566 MHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN 618
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + +M++ G+ P T N ++D FC + A +LL+ M GC + ++++
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230
Query: 61 LINGGS 66
L+NG S
Sbjct: 231 LVNGLS 236
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ L E M+ RG P T N +M G C R AR+LL M +K D S++
Sbjct: 276 LDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNT 335
Query: 61 LING 64
LI G
Sbjct: 336 LIYG 339
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + MI+ G +PD T L+ GFC A+EL M ++G + D F++
Sbjct: 381 LDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYIT 440
Query: 61 LING 64
I G
Sbjct: 441 RIVG 444
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
AEL RG+ P T N L+DG C D A L M G D F+ +IL+ G
Sbjct: 353 FAELRF-RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRG 409
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L + M+ G+ PD T +++ +A +AR + + M SKG ++++
Sbjct: 486 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTV 545
Query: 61 LINGGSARIR 70
LI+ + R R
Sbjct: 546 LIHSYAVRGR 555
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+++G+ P+ T N+LMD A+ + A SM C + +++SI
Sbjct: 180 IDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 239
Query: 61 LING 64
LING
Sbjct: 240 LING 243
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + + M QRG D NA++DGFC + + D+A E L M K ++ +I
Sbjct: 77 ETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSII 136
Query: 63 NG 64
+G
Sbjct: 137 DG 138
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A E M + V P +T +++DG DR D A L SKG + + +S
Sbjct: 110 VDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 169
Query: 61 LING 64
LI+G
Sbjct: 170 LIDG 173
>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
Length = 821
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA GL + M+ +G+ PD L++G+C +A +L M KG K D S S+
Sbjct: 750 LEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSV 809
Query: 61 L 61
L
Sbjct: 810 L 810
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + + PD + L+ G C A+ + AR L M +KG D +++ LING
Sbjct: 725 MKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLING 778
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L M+ G+ PD L++G+CL + A ++ M K D +++I
Sbjct: 420 MNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNI 479
Query: 61 LINGGS 66
L +G S
Sbjct: 480 LSSGYS 485
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + ++M+Q G P+ T N+LM+G+CL + A LL +M S G + + + + L+
Sbjct: 547 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 606
Query: 63 NG 64
+G
Sbjct: 607 DG 608
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M+ G+ PD T + ++DG C + D+A +L M G + ++ +++
Sbjct: 261 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 320
Query: 61 LINGGS 66
LI+G S
Sbjct: 321 LIHGYS 326
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L M+++GV P CN+++ C D+A ++ M G D F++S+
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285
Query: 61 LING 64
+I+G
Sbjct: 286 IIDG 289
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + M G+ P+ L+DG+C R D A + M KG K + +SI
Sbjct: 580 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 639
Query: 61 LING 64
+++G
Sbjct: 640 ILHG 643
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A + E++ Q G +PD+ NA++ GFC +DRFD A +++ M +G D +++IL
Sbjct: 129 EKAVRVMEILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNIL 187
Query: 62 INGGSAR 68
I AR
Sbjct: 188 IGSLCAR 194
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL M + P + N ++ G C A R A E+L M GC+ + ++++
Sbjct: 474 VDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTL 533
Query: 61 LING 64
L+ G
Sbjct: 534 LVEG 537
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS 48
+D+A L + M+ RG+ PD T N ++ G C DRA E + ++ +
Sbjct: 232 IDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNT 279
>gi|255660958|gb|ACU25648.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 348
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM+++GV PD T +L+ G C A D A L+ M +KG ++ +++
Sbjct: 319 LDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTT 378
Query: 61 LING 64
LING
Sbjct: 379 LING 382
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M+ G D N+L+DG C D ARE+ + M KG D F+++ LI
Sbjct: 286 EAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLI 345
Query: 63 NG 64
G
Sbjct: 346 QG 347
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+DEA GL + M +G+ P++ T L++GF ADR D A +L+ M S G
Sbjct: 354 LDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNG 403
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG +P T L+ GFC A R D A ++L M +G + +++ LI G
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQG 205
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSH 58
+D A + + M RG+ P+T T AL+ G C +RA +L M +G C + ++
Sbjct: 177 VDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTY 236
Query: 59 SILING 64
+ LI+G
Sbjct: 237 TQLIHG 242
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI G P+ +T AL+ G C F A LL M + GC+ D ++ LI+G
Sbjct: 259 MIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDG 312
>gi|15222753|ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g55630
gi|30793841|gb|AAP40373.1| unknown protein [Arabidopsis thaliana]
gi|30794021|gb|AAP40457.1| unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein [Arabidopsis thaliana]
gi|332195155|gb|AEE33276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M ++G P+ T N+++ GFC+A +F A LL M S+GC + +S
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 61 LIN 63
L+N
Sbjct: 438 LVN 440
>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 376
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL R +RA L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + ++M+Q G P+ T N+LM+G+CL + A LL +M S G + + + + L+
Sbjct: 526 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 585
Query: 63 NG 64
+G
Sbjct: 586 DG 587
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M+ G+ PD T + ++DG C + D+A +L M G + ++ +++
Sbjct: 241 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 300
Query: 61 LINGGS 66
LI+G S
Sbjct: 301 LIHGYS 306
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L M+++GV P CN+++ C D+A ++ M G D F++S+
Sbjct: 206 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 265
Query: 61 LING 64
+I+G
Sbjct: 266 IIDG 269
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + M G+ P+ L+DG+C R D A + M KG K + +SI
Sbjct: 559 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 618
Query: 61 LING 64
+++G
Sbjct: 619 ILHG 622
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++AN L M + G+ PD T N L +GFC A+ D A ++ M ++G D +++
Sbjct: 749 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 808
Query: 61 LING 64
L++G
Sbjct: 809 LVHG 812
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A MI ++P+ T ++DG+C ++A LL+ M G D ++++
Sbjct: 714 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 773
Query: 61 LING 64
L NG
Sbjct: 774 LTNG 777
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A L M + G++P+ T N +++G C R D A EL M KG + + ++
Sbjct: 259 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 318
Query: 61 LING 64
LING
Sbjct: 319 LING 322
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ + + M++RG+ D T NAL+ GFC + + L M +G + D ++++
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563
Query: 61 LING 64
L+ G
Sbjct: 564 LLRG 567
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M +RG+ PD T N L+ G C + D A +L + G + ++ I++ G
Sbjct: 545 LREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 602
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M +GV P+ T AL++G + FD+ +L M G + +
Sbjct: 294 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNN 353
Query: 61 LING 64
LI+G
Sbjct: 354 LIDG 357
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M ++G PD T N L++G C R D A + L +M S GCK + +H+I++
Sbjct: 261 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIIL 320
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E+M+ RG PD T N L+ C + D A E+L + SKGC +++
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNT 458
Query: 61 LING 64
+I+G
Sbjct: 459 VIDG 462
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M + P T NA+M G C A + RA + L M KGCK +++I
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563
Query: 61 LING 64
LI G
Sbjct: 564 LIEG 567
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + +QR PD T L++ C +A +LL M KGCK D ++++
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283
Query: 61 LING 64
LING
Sbjct: 284 LING 287
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M + G P++ + N L+ GFC + DRA E L M S+GC D +++ L+
Sbjct: 372 EKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 427
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E E MI +G PD C +L+ GFC + + +A ++ + + G D ++++
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181
Query: 61 LING 64
LI G
Sbjct: 182 LIGG 185
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 28/63 (44%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA M G P+ T N ++ C R+ A LL M KGC + +I
Sbjct: 294 LDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNI 353
Query: 61 LIN 63
LIN
Sbjct: 354 LIN 356
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E M +G+ P+ T ++LMDG C R +A EL M ++GC+ + +++
Sbjct: 243 VDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 61 LING 64
LI G
Sbjct: 303 LITG 306
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG +PD+ T L+ G C R D A++L M K C +++ LING
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+++ P T +L++G C + D A + M KG + + F++S
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSS 267
Query: 61 LING 64
L++G
Sbjct: 268 LMDG 271
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E+M+ RG P+ T L+ G C + A ELL M +G K DA + +I
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 63 NGGSA 67
+G A
Sbjct: 340 SGFCA 344
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + ++M+Q G P+ T N+LM+G+CL + A LL +M S G + + + + L+
Sbjct: 470 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 529
Query: 63 NG 64
+G
Sbjct: 530 DG 531
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M+ G+ PD T + ++DG C + D+A +L M G + ++ +++
Sbjct: 185 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 244
Query: 61 LINGGS 66
LI+G S
Sbjct: 245 LIHGYS 250
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L M+++GV P CN+++ C D+A ++ M G D F++S+
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209
Query: 61 LING 64
+I+G
Sbjct: 210 IIDG 213
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + M G+ P+ L+DG+C R D A + M KG K + +SI
Sbjct: 503 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 562
Query: 61 LING 64
+++G
Sbjct: 563 ILHG 566
>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 372
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL R +RA L + SKG K D H+ILI
Sbjct: 216 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILI 275
Query: 63 NG 64
+G
Sbjct: 276 HG 277
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 74 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 133
Query: 61 LING 64
+ING
Sbjct: 134 MING 137
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 144 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 203
Query: 61 LING 64
LING
Sbjct: 204 LING 207
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 109 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 168
Query: 61 LING 64
LING
Sbjct: 169 LING 172
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E M G++P+ T +LM+G C +R D+A E+ M +KG K D ++
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 61 LINGGSAR 68
LI+G R
Sbjct: 660 LIDGFCKR 667
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L M RG+ P+ + N +M G C D AR + ++ KG K + +++SIL
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 62 ING 64
I+G
Sbjct: 520 IDG 522
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LM++ G PD T N+L+ G+C + D A++L M +G QDA S++ LI G
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEG 208
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + + RG+ P++ T N +++G C +FD A L M S GC D +++S
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480
Query: 61 LI 62
I
Sbjct: 481 FI 482
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + M G+ P TC A+++ +C R A + SM KGC+ + ++++ +
Sbjct: 282 EEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAM 341
Query: 62 ING 64
+ G
Sbjct: 342 VQG 344
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + E M +G P+ T NA++ GFC + +A LL M G + D ++++
Sbjct: 316 MSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNL 375
Query: 61 LING 64
LI G
Sbjct: 376 LIRG 379
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M + GV PD T N L+ G C+ + A LL M G D +++++LI
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLI 412
Query: 63 NG 64
+
Sbjct: 413 DA 414
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + ++M+Q G P+ T N+LM+G+CL + A LL +M S G + + + + L+
Sbjct: 546 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 605
Query: 63 NG 64
+G
Sbjct: 606 DG 607
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M+ G+ PD T + ++DG C + D+A +L M G + ++ +++
Sbjct: 261 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 320
Query: 61 LINGGS 66
LI+G S
Sbjct: 321 LIHGYS 326
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L M+++GV P CN+++ C D+A ++ M G D F++S+
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285
Query: 61 LING 64
+I+G
Sbjct: 286 IIDG 289
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + M G+ P+ L+DG+C R D A + M KG K + +SI
Sbjct: 579 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 638
Query: 61 LING 64
+++G
Sbjct: 639 ILHG 642
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EAN + + M G+NP+ T N L+DGFC + +A L + S+G +++I
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 61 LING 64
L++G
Sbjct: 379 LVSG 382
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + M +RG+ P T L+D F +D ++A +L +SM G D ++S+LI+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 64 G 64
G
Sbjct: 452 G 452
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M + G+ PD T + L+ GFC+ + + A L SM K C+ + ++
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 61 LING 64
+I G
Sbjct: 484 MILG 487
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G +P+ L+DG C ++A++L MG G + ++++LING
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G +PD T NALM G A D A L+ +M GC D SH+I++NG
Sbjct: 502 MKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNG 555
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M G+ P+T N L+ FC R A E+ M KGCK D ++ +
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493
Query: 61 LING 64
LI+G
Sbjct: 494 LISG 497
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MDEANG-LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+D+A L++++ G+ PD T N+L+ G+ A E+L M +KGCK + +S++
Sbjct: 363 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYT 422
Query: 60 ILING 64
IL++G
Sbjct: 423 ILVDG 427
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M++ G+ P + +CN L++G C + + A E M +G D + +
Sbjct: 574 VDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 633
Query: 61 LING 64
LING
Sbjct: 634 LING 637
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M+ +G D T N+L+ G C A D+AR L M G + S +I
Sbjct: 539 IKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNI 598
Query: 61 LING 64
LING
Sbjct: 599 LING 602
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M ++G PD T N+L+ G C D A LL M S+G + +++ LI
Sbjct: 471 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 530
Query: 63 NG 64
N
Sbjct: 531 NA 532
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M G PD T N ++ G C DR + A +++ M +G D ++
Sbjct: 262 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321
Query: 61 LING 64
L+NG
Sbjct: 322 LMNG 325
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M+ RG PD T N+L++G C A R + + + ++G D +++
Sbjct: 609 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNT 668
Query: 61 LIN 63
L++
Sbjct: 669 LMS 671
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G P+ + L+DGFC + D A LL M + G K + + LI+
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M+++G +PD T N L+ G C +AR+L+V M KG K D +++
Sbjct: 257 VDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTT 316
Query: 61 LING 64
LI+G
Sbjct: 317 LIDG 320
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEAN L M+ +G+ P+ T L+DG C + R D A E+ M +G D +++
Sbjct: 222 MDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNT 281
Query: 61 LING 64
LI G
Sbjct: 282 LIYG 285
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M GV+PD T L++G C + D A EL M KG + + +
Sbjct: 187 LDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTT 246
Query: 61 LING 64
LI+G
Sbjct: 247 LIDG 250
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++AN L M + G+ PD T N L +GFC A+ D A ++ M ++G D +++
Sbjct: 726 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 785
Query: 61 LING 64
L++G
Sbjct: 786 LVHG 789
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A MI ++P+ T ++DG+C ++A LL+ M G D ++++
Sbjct: 691 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 750
Query: 61 LING 64
L NG
Sbjct: 751 LTNG 754
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A L M + G++P+ T N +++G C R D A EL M KG + + ++
Sbjct: 236 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 295
Query: 61 LING 64
LING
Sbjct: 296 LING 299
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ + + M++RG+ D T NAL+ GFC + + L M +G + D ++++
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540
Query: 61 LING 64
L+ G
Sbjct: 541 LLRG 544
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M +RG+ PD T N L+ G C + D A +L + G + ++ I++ G
Sbjct: 522 LREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 579
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M +GV P+ T AL++G + FD+ +L M G + +
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNN 330
Query: 61 LING 64
LI+G
Sbjct: 331 LIDG 334
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ G+ P+T T + L+ GFC D F+ A++L M ++GCK D+ + LI
Sbjct: 275 EAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLI 334
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DE + +M RGVN ST N + C + A+ LL M S G K + ++S L
Sbjct: 239 DEVGKVLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHL 298
Query: 62 ING 64
I G
Sbjct: 299 IRG 301
>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 376
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + +++++RG+ PD T +++G+C + AR++ M +G K D ++++
Sbjct: 578 MKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTV 637
Query: 61 LINGGS 66
+++G S
Sbjct: 638 VLDGHS 643
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M +RG+ PD T N L+ GF A ELL +G++G K ++ +H+ +I
Sbjct: 436 DAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRII 495
Query: 63 NG 64
G
Sbjct: 496 EG 497
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + M + GVNP+ TC+ ++G C R D E L ++ + D F+++ +
Sbjct: 244 EEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAV 303
Query: 62 INGGSARIR 70
I G + ++
Sbjct: 304 IRGFCSEMK 312
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A +LM+ RG PD + N L+ C + D A ELL + KGC S++
Sbjct: 148 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 207
Query: 61 LING 64
+I+G
Sbjct: 208 VIDG 211
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + G P+T + N ++ G C A+R++ A EL+ MG KGC + + ++
Sbjct: 43 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 102
Query: 61 LIN 63
LI+
Sbjct: 103 LIS 105
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N +++G C R D A E L ++ S GC+ + S++I++
Sbjct: 10 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69
Query: 63 NG 64
G
Sbjct: 70 KG 71
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E + + G P++ + N L+ FC + D+A L M S+GC D S++ L+
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 176
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M ++ + PD T N LM G CL R D AR+L+ M +G + D +++
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 802 LISGYSMK 809
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M++RGV +T N L+ + R A EL+ MG KG D F+++I
Sbjct: 602 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 661
Query: 61 LING 64
LING
Sbjct: 662 LING 665
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M +RG+ PD T N L+ G+ + A + M +KG +++
Sbjct: 777 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 836
Query: 61 LING 64
LI G
Sbjct: 837 LIQG 840
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M +G+ PD T N L++G C +A E+ +M +G + +++ LI
Sbjct: 639 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 698
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ RG+ PD T N ++ G C DRA E++ ++ KG + D S++I
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNI 303
Query: 61 LI 62
L+
Sbjct: 304 LL 305
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L +LM ++G+ PD + + L+ FC R D A E L +M S GC D +++
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 61 LI 62
++
Sbjct: 409 VL 410
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +P T N ++ GFC A R + A +L SM GC+ + ++++
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 548
Query: 61 LING 64
LI G
Sbjct: 549 LIEG 552
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L E M+++G NPD C L+ GF +A ++ + G + D F+++ LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 63 NG 64
NG
Sbjct: 166 NG 167
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
++++ PD NAL++GFC +R D A +L M SK D +++I+I +R
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M + +PDT T N ++ C + D A ++L + S C+ +++I
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 61 LI 62
LI
Sbjct: 234 LI 235
>gi|302821834|ref|XP_002992578.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
gi|300139647|gb|EFJ06384.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
Length = 427
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + MI+ V+P T T NAL+ G C R +RA EL M + C+ DA ++ L+
Sbjct: 333 EADEVFSDMIRGDVSPQTVTYNALISGLCRVGRVERALELFREMPQRECRPDAATYGALL 392
Query: 63 NG 64
+G
Sbjct: 393 DG 394
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M QR PD +T AL+DG C A+R D A LL G + D H ++
Sbjct: 376 MPQRECRPDAATYGALLDGICKAERADDAVTLLREASESGVEIDVAVHEAVV 427
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A GL E MI++G P+ T LM+G CL + A++++ M +GCK + +
Sbjct: 219 LDKAKGLLEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGV 278
Query: 61 LIN 63
L++
Sbjct: 279 LMS 281
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M +R + PD T N L++ C R A E+L M GC+ +A ++ +
Sbjct: 289 IDEAKSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRM 348
Query: 61 LING 64
L++G
Sbjct: 349 LVDG 352
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A+ + + M++R V P T N+L+ C D+A+ LL M KG + +A + ++L
Sbjct: 185 EQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAITFALL 244
Query: 62 ING 64
+ G
Sbjct: 245 MEG 247
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M + G+ PDT T N++++G C A + + E M KGC + +++I
Sbjct: 446 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505
Query: 61 LI 62
LI
Sbjct: 506 LI 507
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E N + MI +G +P+ T N L++ FC +++ + A +++V M +G DA S +
Sbjct: 481 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 540
Query: 61 LING 64
LI G
Sbjct: 541 LIYG 544
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G+ PD N+L+ G CL A +++ M +GC D +++I+ING
Sbjct: 354 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I +G PD T N L+DG+C + D A +L+ M G D +++ ++NG
Sbjct: 422 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 474
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G PD T N ++DG+C A ELL KG D ++ LING
Sbjct: 281 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 334
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA+ + M Q G++PD + N L+ GFC + A L + KG A + +
Sbjct: 516 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 575
Query: 61 LINGGSARI 69
LI S ++
Sbjct: 576 LIGAFSGKL 584
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + + +G PD T +L++G C +RA EL +KG K D ++
Sbjct: 306 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 365
Query: 61 LING 64
L+ G
Sbjct: 366 LVKG 369
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M + G+ PDT T N++++G C A + + E M KGC + +++I
Sbjct: 447 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506
Query: 61 LI 62
LI
Sbjct: 507 LI 508
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E N + MI +G +P+ T N L++ FC +++ + A +++V M +G DA S +
Sbjct: 482 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 541
Query: 61 LING 64
LI G
Sbjct: 542 LIYG 545
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G+ PD N+L+ G CL A +++ M +GC D +++I+ING
Sbjct: 355 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I +G PD T N L+DG+C + D A +L+ M G D +++ ++NG
Sbjct: 423 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 475
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G PD T N ++DG+C A ELL KG D ++ LING
Sbjct: 282 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 335
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA+ + M Q G++PD + N L+ GFC + A L + KG A + +
Sbjct: 517 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 576
Query: 61 LINGGSARI 69
LI S ++
Sbjct: 577 LIGAFSGKL 585
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + + +G PD T +L++G C +RA EL +KG K D ++
Sbjct: 307 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 366
Query: 61 LING 64
L+ G
Sbjct: 367 LVKG 370
>gi|356534139|ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Glycine max]
Length = 480
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + MI R P+ T N+++ G C+A +FD A +L M +KGC ++F ++
Sbjct: 382 IEKALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEACSMLKEMKTKGCSPNSFVYNT 441
Query: 61 L 61
L
Sbjct: 442 L 442
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M ++G+NPD + CN ++D C + A ++ M +GC+ D +++ LI
Sbjct: 313 MWEKGINPDVAICNCIIDQLCFKKKIPEALDIFREMTDRGCQADVATYNTLI 364
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M RG D +T N L+ FC R ++ ELL M +KGC + ++S ++
Sbjct: 340 EALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYIL 399
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M + G+ P+ T N L+ C +R D A +LLV M SKGC D S++ LI+
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL + M RG+ + T N ++ G+C A A ELL M +G K DA + +I+I
Sbjct: 509 EAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVI 568
Query: 63 NG 64
+
Sbjct: 569 DA 570
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + MI+ GV P+ NALM G C A + M GC + ++S LI
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393
Query: 63 NG 64
+G
Sbjct: 394 DG 395
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M+ RG PD T N ++D +C + + A +L+ + + D +++
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601
Query: 61 LING 64
LI+G
Sbjct: 602 LISG 605
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M PDT + NAL+DG+C R + A++L M +K C D +++
Sbjct: 270 VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTC 329
Query: 61 LING 64
L+ G
Sbjct: 330 LVRG 333
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E++ + G+ PD T +++DG C + DRA E++ M KG + D F+ S LI G
Sbjct: 100 LREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 157
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +G P+ T L+ G C A + D AR L+ M + C D S++
Sbjct: 235 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNA 294
Query: 61 LING 64
L++G
Sbjct: 295 LLDG 298
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + +M R P+ T ++L+ G C A D+A +L M SKGC + +++
Sbjct: 200 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 259
Query: 61 LING 64
LI+G
Sbjct: 260 LIHG 263
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MDEANGL-AELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA L E++ PD T AL+DGFC + ++A ++L M + C + ++S
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223
Query: 60 ILING 64
L++G
Sbjct: 224 SLLHG 228
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS-KGCKQDAFSHS 59
++EA L + M + PD T L+ GFC A R + AR LL +M + G D ++S
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364
Query: 60 ILINGGS 66
I++ G S
Sbjct: 365 IVVAGYS 371
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK 49
EA + MI R V P+ T ++L+DG C A R D A E+L +M +K
Sbjct: 378 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVS-MGSKGCKQDAFSHS 59
MD A + M +GV PD T +AL+ G+C A + D A +L + S K D +++
Sbjct: 129 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYT 188
Query: 60 ILING 64
LI+G
Sbjct: 189 ALIDG 193
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M+ + V P T N+++ C D A +LLV+M + G + +++
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470
Query: 61 LINGGS 66
L+ G S
Sbjct: 471 LLEGFS 476
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A ELM+ RG PD + N L+ C D A +LL + KGC S++
Sbjct: 137 MDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNT 196
Query: 61 LING 64
+I+G
Sbjct: 197 VIDG 200
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M +G PD T N +++G C R D A E L ++ S G + + S++I++ G
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A E + G P+T + N ++ G A+R++ A +L+ M KGC + + ++
Sbjct: 32 VDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 91
Query: 61 LIN 63
LI+
Sbjct: 92 LIS 94
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E + + G P++ + N L+ FC + D+A + M S+GC D S++
Sbjct: 102 VEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNT 161
Query: 61 LING 64
L+
Sbjct: 162 LLTA 165
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M + G+ P+ T N L+ C +R D A +LLV M SKGC D S++ LI+
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA GL + M RG+ + T N ++ G+C A A ELL M +G K DA + +I+I
Sbjct: 509 EAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVI 568
Query: 63 NG 64
+
Sbjct: 569 DA 570
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + MI+ GV P+ NALM G C A + M GC + ++S LI
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393
Query: 63 NG 64
+G
Sbjct: 394 DG 395
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M+ RG PD T N ++D +C + + A +L+ + + D +++
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601
Query: 61 LING 64
LI+G
Sbjct: 602 LISG 605
>gi|413948334|gb|AFW80983.1| hypothetical protein ZEAMMB73_782047 [Zea mays]
Length = 436
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + M +RGV P+ T LM G C A R+D A++LL M + C+ D ++ +L++
Sbjct: 215 AERLVDEMTRRGVAPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVANYGVLMS 274
Query: 64 GGSA 67
+A
Sbjct: 275 ACAA 278
>gi|255660964|gb|ACU25651.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 376
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E M +G+ P+ T ++LMDG C R +A EL M ++GC+ + +++
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 61 LING 64
LI G
Sbjct: 303 LITG 306
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG +PD+ T L+ G C R D A++L M K C +++ LING
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+++ P T +L++G C + D A L M SKG + + F++S
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 61 LING 64
L++G
Sbjct: 268 LMDG 271
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E+M+ RG P+ T L+ G C + A ELL M +G K DA + +I
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 63 NG 64
+G
Sbjct: 340 SG 341
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M ++G P+ T N+++ GFC+A +F A LL M S+GC + +S
Sbjct: 455 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 514
Query: 61 LIN 63
L+N
Sbjct: 515 LVN 517
>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13800-like [Brachypodium distachyon]
Length = 821
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A GL + M+Q+G+ PD AL++G+C +A +L M KG K D + S+
Sbjct: 747 LEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSV 806
Query: 61 L 61
L
Sbjct: 807 L 807
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 5 NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N L M + + PD L+DG C +D ++AR L M KG D ++++ LING
Sbjct: 716 NRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALING 775
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+QRG+ D LM+G+C A EL M S G K D ++++L++G
Sbjct: 636 MVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDG 689
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G++PD L+ G+CL AR+ M K D +++I
Sbjct: 416 MDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNI 475
Query: 61 LINGGSAR 68
L +G S R
Sbjct: 476 LASGLSKR 483
>gi|255660956|gb|ACU25647.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 376
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++ L
Sbjct: 111 DKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTL 170
Query: 62 ING 64
ING
Sbjct: 171 ING 173
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + M R PD T LMDG C ADR D A LL M GC + ++
Sbjct: 215 VDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 274
Query: 61 LING 64
LING
Sbjct: 275 LING 278
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + M +G P+ TC++LM GF A RA E+ M Q+ +S+L
Sbjct: 426 DDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVL 485
Query: 62 ING 64
I+G
Sbjct: 486 IHG 488
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + M +G P+ T N L+ G CL + ++A LL M S C + ++
Sbjct: 285 LSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 344
Query: 61 LING 64
+ING
Sbjct: 345 IING 348
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M +G +T +A++DG C + D A E+L M +KGC +A++ S L+
Sbjct: 392 EAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLM 451
Query: 63 NG 64
G
Sbjct: 452 KG 453
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P T N L++G C RA +L+ +M KGC + +++
Sbjct: 250 IDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNT 309
Query: 61 LING 64
LI+G
Sbjct: 310 LIHG 313
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ + M + G +PD + N L++GFC ++ D A E+L M + G K D +++
Sbjct: 537 LDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNT 596
Query: 61 LINGGS 66
LI+ S
Sbjct: 597 LISHFS 602
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M + GV P+ T N L+DG C R + A E M KG K +A +++
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491
Query: 61 LI 62
LI
Sbjct: 492 LI 493
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 DEANGLAELM-IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+E GL E M Q P+T T N L+DG+C A + AREL M G + + +
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 61 LING 64
L++G
Sbjct: 457 LVDG 460
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M++ G +PD L+ G A + DRA +L M G D S ++
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561
Query: 61 LING 64
LING
Sbjct: 562 LING 565
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 5 NGLAEL---MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
NG E M +G+ + T AL+ FC + ++A EL M GC DA + L
Sbjct: 468 NGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTL 527
Query: 62 INGGS 66
I+G S
Sbjct: 528 ISGLS 532
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M + G+ PDT T N++++G C A + + E M KGC + +++I
Sbjct: 449 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508
Query: 61 LI 62
LI
Sbjct: 509 LI 510
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E N + MI +G +P+ T N L++ FC +++ + A +++V M +G DA S +
Sbjct: 484 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 543
Query: 61 LING 64
LI G
Sbjct: 544 LIYG 547
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G+ PD N+L+ G CL A +++ M +GC D +++I+ING
Sbjct: 357 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I +G PD T N L+DG+C + D A +L+ M G D +++ ++NG
Sbjct: 425 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 477
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G PD T N ++DG+C A ELL KG D ++ LING
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 337
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA+ + M Q G++PD + N L+ GFC + A L + KG A + +
Sbjct: 519 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 578
Query: 61 LINGGSARI 69
LI S ++
Sbjct: 579 LIGAFSGKL 587
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + + +G PD T +L++G C +RA EL +KG K D ++
Sbjct: 309 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 368
Query: 61 LING 64
L+ G
Sbjct: 369 LVKG 372
>gi|255661016|gb|ACU25677.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 367
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ +G+NP T + L+ G CL + D+A +L + SKG K D H+I+I
Sbjct: 217 EAYDLVKEMLDKGLNPSVITYSLLIKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + MI+ G P+ NAL++G A +F+ A +L MG+ ++S
Sbjct: 145 LDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASKFEDAIRVLREMGTXHFSPTVVTYSX 204
Query: 61 LING 64
JING
Sbjct: 205 JING 208
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC +++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIAERKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+ ++G D +A+++G C + D+A +L M GCK +A ++ LING
Sbjct: 118 EIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALING 173
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P T + J++G C +RF A +L+ M KG ++S+LI G
Sbjct: 196 SPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIKG 243
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M ++G+NPD + CN ++D C + A ++ M +GC+ D +++ LI
Sbjct: 313 MWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEMNDRGCQADVATYNTLI 364
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M RG D +T N L+ FC R ++ ELL M KGC + +++ ++
Sbjct: 348 MNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYIL 399
>gi|308081764|ref|NP_001183223.1| uncharacterized protein LOC100501610 [Zea mays]
gi|238010158|gb|ACR36114.1| unknown [Zea mays]
Length = 289
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + M +RGV P+ T LM G C A R+D A++LL M + C+ D ++ +L++
Sbjct: 68 AERLVDEMTRRGVAPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVANYGVLMS 127
Query: 64 GGSA 67
+A
Sbjct: 128 ACAA 131
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G++P+T T N L+ C + D AREL M KGCK + F+ IL+ G
Sbjct: 138 MVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG 191
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + LM + GV+PD T L+ G+C + D A+ LL M C +A++ +I
Sbjct: 377 LSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 61 LIN 63
L++
Sbjct: 437 LLH 439
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + MI +G+ P + N LMDG C A+ ++ M G DA ++ L+
Sbjct: 344 EAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLL 403
Query: 63 NG 64
+G
Sbjct: 404 HG 405
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M++ P+ TCN L+ R A ELL M KG D + +I
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 61 LING--GSARIRK 71
+++G GS + K
Sbjct: 472 IVDGLCGSGELDK 484
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+I+ PD T + L++G C A RF A+ L M + + D+ +++I I+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIH 567
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 23/87 (26%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG---------- 50
+ EA L M ++G DT TCN ++DG C + D+A E++ M G
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 51 -------------CKQDAFSHSILING 64
C D ++S L+NG
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNG 533
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + ++M+Q G P+ T N+LM+G+CL + A LL +M S G + + + + L+
Sbjct: 384 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 443
Query: 63 NG 64
+G
Sbjct: 444 DG 445
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M+ G+ PD T + ++DG C + D+A +L M G + ++ +++
Sbjct: 99 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 158
Query: 61 LINGGS 66
LI+G S
Sbjct: 159 LIHGYS 164
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L M+++GV P CN+++ C D+A ++ M G D F++S+
Sbjct: 64 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123
Query: 61 LING 64
+I+G
Sbjct: 124 IIDG 127
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + M G+ P+ L+DG+C R D A + M KG K + +SI
Sbjct: 417 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 476
Query: 61 LING 64
+++G
Sbjct: 477 ILHG 480
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L M ++G+ P+T+T L+DG C A F RA EL+ MG +G + F+++
Sbjct: 385 LNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNA 444
Query: 61 LING 64
+I+G
Sbjct: 445 IIDG 448
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+Q G+NP+ ++L++G C +A E+L M KG K + ++H+ LI+G
Sbjct: 290 VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDG 342
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
L +LM + G P+ T NA++DG C RF A +LL G D +++ILI+
Sbjct: 426 LMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILIS 482
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LM++ G PD T N+L+ G+C ++ D AR+L M +G QD S++ LI G
Sbjct: 36 LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEG 90
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L + + RG+ P+ T N+L++G C + + D A + L M S GC D +++S
Sbjct: 304 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSF 363
Query: 62 I 62
I
Sbjct: 364 I 364
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + ELM RG P+ T NAL+ GFC + +A LL M G DA ++++
Sbjct: 198 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNL 257
Query: 61 LING 64
LI G
Sbjct: 258 LIRG 261
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M ++G+ P TC A+++ +C R A +L M +GCK + ++++ L+
Sbjct: 165 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 224
Query: 63 NG 64
G
Sbjct: 225 QG 226
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSA 67
M+ G NPD T M +C+ R + A +L+ M G D +++ L++G ++
Sbjct: 418 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 474
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L LM G+ D T NAL++ C R D+A L S+ ++G K +A + +
Sbjct: 268 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 327
Query: 61 LING 64
LING
Sbjct: 328 LING 331
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GVNPD T N L+ G C+ + A LL M G D ++++ LIN
Sbjct: 247 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 296
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ G+ P+T T + L+ GFC D F+ A++L M ++GCK D+ + LI
Sbjct: 275 EAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLI 334
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DE + +M RGVN ST N + C + A+ LL M S G K + ++S L
Sbjct: 239 DEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHL 298
Query: 62 ING 64
I+G
Sbjct: 299 IHG 301
>gi|357466379|ref|XP_003603474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492522|gb|AES73725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 528
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN L +M+ +G+ PD NAL+DG C R RA EL M +GC + ++ I
Sbjct: 254 EANRLFRIMVFKGIVPDVVAYNALIDGCCKTYRVGRALELFDDMKKRGCVPNRVTYDSFI 313
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG--CKQDAFSHSILIN 63
M Q G PD NAL++ C F +AR LL M G D F++++LI+
Sbjct: 178 MRQFGCKPDVQAYNALINAMCSVGNFTKARHLLQQMELPGFHSPPDVFTYTVLIS 232
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G+NP T + LM G CL + ++A +L + SKG K D H++LI
Sbjct: 217 EAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C + +++
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK +A ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ + M+++G++P ST N+L+ + R D A ++ + KG DA +++I
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401
Query: 61 LING 64
LING
Sbjct: 402 LING 405
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M + V PD T N +M G C + + AREL M +G K D S + LI+G S R
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRR 549
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G NP T NAL+ G C D A ELL M SKG D ++ LI G
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M GV P+ T N ++ G+C + R + A +L +M + + D+F++ LI+G
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISG 300
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + M ++ + PD+ T +L+ G C R + A ++ M KG + A ++
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 61 LING 64
LI+G
Sbjct: 332 LIDG 335
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L + + GV PD NAL+DG C A ELL M D + +
Sbjct: 447 MKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT 506
Query: 61 LING 64
++ G
Sbjct: 507 IMQG 510
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A GL E M PD T N L+DG C R DRA +LL M +G + + +I
Sbjct: 457 IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNI 516
Query: 61 LIN 63
LI
Sbjct: 517 LIK 519
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M+ +GV P+ T NAL+ G C RFD +LL M + D ++++ ++
Sbjct: 214 EAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVV 273
Query: 63 NG 64
+G
Sbjct: 274 HG 275
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L + +G+ +L+ G+C D A L+ M S+ C D +++
Sbjct: 422 LEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNT 481
Query: 61 LING 64
LI+G
Sbjct: 482 LIDG 485
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHSILING 64
M + G+ PDT T N LM G C A A L V M + G D +S++ILI G
Sbjct: 116 MREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKG 170
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + +LM + VNP T N ++ GFC + +A L M G + + +
Sbjct: 317 MKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNS 376
Query: 61 LING 64
LI+G
Sbjct: 377 LISG 380
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+Q G P+ T N L+ G C A R D R L+ M S D F++SIL +G
Sbjct: 252 LRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDG 309
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E+++ G+ P T+ N L++G+C A + M S+ + D +++ LI
Sbjct: 353 KAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALI 412
Query: 63 NG 64
NG
Sbjct: 413 NG 414
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L E M GV+ T N L+ G C + D A EL+ ++ ++G + D S++ +
Sbjct: 527 EQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTI 586
Query: 62 ING 64
I+
Sbjct: 587 ISA 589
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D + L + M+ GV+P+T T N L+ C + D AREL M KGC+ + +S I
Sbjct: 37 VDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGI 96
Query: 61 LING 64
L+ G
Sbjct: 97 LVRG 100
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + M++ G +P+ TCN L+ R A ELL M KG D + +I
Sbjct: 321 VSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNI 380
Query: 61 LING 64
+I+G
Sbjct: 381 VIDG 384
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L LM GV PDT T L+ G+C + A +L M GC + ++ +IL+
Sbjct: 288 DARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILL 347
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E GL + M +RGV+PD S N ++ C R A +L M KG + S SILI
Sbjct: 521 EIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILI 580
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+ EA L + M ++G DT TCN ++DG C + D+A E++ M + G
Sbjct: 356 ISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M+ G+ P+ + N +MDG C AR L+ M S G D +++ L+
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312
Query: 63 NG 64
+G
Sbjct: 313 HG 314
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M+ G PD T +++GFC D A LL SM S GCK + S++I
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 61 LING 64
++ G
Sbjct: 432 VLKG 435
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M Q+ D T N L+D FC DR ELL M S GC D +++ +I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Query: 63 NG 64
NG
Sbjct: 399 NG 400
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G P+ T N L++ C ++A ELL M GC D S+S +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503
Query: 63 NG 64
+G
Sbjct: 504 DG 505
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ AN + M G+ P+ N ++ G C A+R+ A ELL M K C D + +I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 61 LIN 63
L++
Sbjct: 362 LVD 364
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A R+ A EL+ M +GC + + +
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 61 LIN 63
LIN
Sbjct: 467 LIN 469
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M++ P+ T N L+ C F+R E+L M GC D ++ +I+G
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M +G DT CN +++ C D A LL + GC+ D S++ ++ G
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M G +P+ +ALM GFC R + A + M G KQD ++I
Sbjct: 278 VDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTI 337
Query: 61 LIN 63
LIN
Sbjct: 338 LIN 340
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA L E M+ + + PD T N L++GF + DRA++++ M S GC + F++S
Sbjct: 242 LKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYS 301
Query: 60 ILING 64
L++G
Sbjct: 302 ALMSG 306
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + D T N L+ GFC R + A +L + S+G + S+ I
Sbjct: 348 IDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRI 407
Query: 61 LIN 63
++N
Sbjct: 408 VLN 410
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSILINGGS 66
P+ T + LMDG C + R A EL M SK DA ++++LING S
Sbjct: 224 PNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFS 273
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA E M G+ DT L++ FC R D A LL M CK D + ++
Sbjct: 313 LEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNV 372
Query: 61 LING 64
L+ G
Sbjct: 373 LLRG 376
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L M+ RG++PD T N L+ G+C + +R LL M G D+F+ +L+
Sbjct: 391 EAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLV 450
Query: 63 NG 64
G
Sbjct: 451 EG 452
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L ++M +RGV PD + ALM+G C R A +L M +G D +++
Sbjct: 354 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 413
Query: 61 LING 64
LI+G
Sbjct: 414 LIHG 417
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+ N E M + G +PD T N L++ +C R D A L M +G D S++ L+
Sbjct: 321 KVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALM 380
Query: 63 NG--GSARIRK 71
NG R+R+
Sbjct: 381 NGLCKEGRVRE 391
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC--KQDAFSH 58
M E+ L MI G++PD+ TC L++G+ +F A L+V + G QD +S+
Sbjct: 424 MQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY 483
Query: 59 SIL 61
I+
Sbjct: 484 LIV 486
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + MI GV PDT TCN L+ GFC ++ + A EL + D +++I
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 61 LING 64
+I+G
Sbjct: 543 IIHG 546
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS 48
EA L + M+ R + PDT T N+++ GFC +RFD A+ + M S
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + +RG+ +T+T N L+ GFC D + A++L M S G D + +I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 61 LING 64
L+ G
Sbjct: 508 LLYG 511
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++ G+ P T N L++G CL R A L+ M KG D ++ ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 63 NG 64
NG
Sbjct: 269 NG 270
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+++G+ P+ T N ++DGFC R+ A+ LL M + D + + LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 63 NG 64
+
Sbjct: 374 SA 375
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
+ +AN L M G PD ST N L+ G A D++ EL+ M S G DAF+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + +LM +PD T N ++D +C A R D +LL + +G + +++ L
Sbjct: 418 DDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 62 ING 64
I+G
Sbjct: 474 IHG 476
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E++ ++ DT N ++ G C + D A +L S+ G + D ++++
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 61 LING 64
+I+G
Sbjct: 578 MISG 581
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + GV PD T N ++ GFC A L M G + D +++
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 61 LING 64
LI G
Sbjct: 613 LIRG 616
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ L + I +G PD T N L+DG+C + D A E++ M S+G D +++
Sbjct: 416 VSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNT 475
Query: 61 LING 64
L+NG
Sbjct: 476 LLNG 479
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M +G+ PD T N L++G C A + + E+ +M KGC + +++I
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNI 510
Query: 61 LIN 63
+++
Sbjct: 511 IVD 513
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M+ G PD T N+++DG+C A +L KG K D F++ LI
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLI 337
Query: 63 NG 64
NG
Sbjct: 338 NG 339
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E + + M ++G P+ T N ++D C A + + A +LL M SKG K D S L
Sbjct: 487 EEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTL 546
Query: 62 ING 64
G
Sbjct: 547 FTG 549
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M ++GV+P+ T NAL++G C + D+A M +KG + ++++ILIN
Sbjct: 578 MHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILIN 630
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + +M++ G+ P T N ++D FC A +LL M + GC + ++++
Sbjct: 183 IDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNV 242
Query: 61 LINGGS 66
L+NG S
Sbjct: 243 LVNGLS 248
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L E M+ RG P T N +M G C R AR+LL M +K D S++
Sbjct: 288 IEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNT 347
Query: 61 LING 64
LI G
Sbjct: 348 LIYG 351
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + MI+ G +PD T + GFC A+EL M ++G + D F++
Sbjct: 393 LDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYIT 452
Query: 61 LING 64
I G
Sbjct: 453 RIVG 456
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ L + M+ G+ PD T +++ +A +AR L + M SKG ++++
Sbjct: 498 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTV 557
Query: 61 LINGGSARIR 70
LI+ + R R
Sbjct: 558 LIHSYAVRGR 567
>gi|255685988|gb|ACU28483.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 107
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++ L+
Sbjct: 28 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNSLL 87
Query: 63 NG 64
NG
Sbjct: 88 NG 89
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S +++
Sbjct: 1 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 60
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A E M + G+ P NAL++G+C R D AREL+ M +K K D ++S
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 61 LING 64
+I+G
Sbjct: 404 IISG 407
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M+Q GV PD T L+DG C ++A L M KG D ++S+
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 509 LINGLSKSAR 518
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M+++GV PD T ++L+ G C R + A EL +M G + D F+++
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473
Query: 61 LING 64
LI+G
Sbjct: 474 LIDG 477
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L M + V PD T + ++ G+C D A +L M KG DA ++S
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 61 LING 64
LI G
Sbjct: 439 LIRG 442
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ PD T +L+ C A ++A L+ M +G + + + + LI+G
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+++G+ P+ T N+L+D A+ + A SM C + +++SI
Sbjct: 684 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSI 743
Query: 61 LING 64
LING
Sbjct: 744 LING 747
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M ++ V P +T A++DG DR D A L SKG + + +S LI
Sbjct: 616 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 675
Query: 63 NG 64
+G
Sbjct: 676 DG 677
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M + P+ T N ++D C A + + A ++ S +GC D ++
Sbjct: 404 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 463
Query: 61 LING 64
LI+G
Sbjct: 464 LIDG 467
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING----GS 66
+I+RG PD + N MD A ++ R + + S G D S+SILI+G G
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578
Query: 67 AR 68
AR
Sbjct: 579 AR 580
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + + M Q+G D NA++DGFC + + +A E+L M K + ++ ++
Sbjct: 581 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 640
Query: 63 NG 64
+G
Sbjct: 641 DG 642
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +AN L I +G PD T N L+DG+C + D A EL+ M S+G D +++
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580
Query: 61 LING 64
L+NG
Sbjct: 581 LLNG 584
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M +G+ PD T N L++G C + + E+ +M KGC + +++
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615
Query: 61 LI 62
+I
Sbjct: 616 II 617
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + + + +G+ P N L+ G C A +L+ M KGCK D ++++++
Sbjct: 452 DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511
Query: 62 ING 64
ING
Sbjct: 512 ING 514
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G PD T N +++G C A L+ +KGC D F+++ L++G
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L + +++RGV P+ T N + G C DRA LL + +G + D +++ +I
Sbjct: 313 ESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVI 372
Query: 63 NG 64
G
Sbjct: 373 CG 374
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M+ G P+ T N+++DG+C A +L KG K D F++ L+
Sbjct: 383 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 442
Query: 63 NG 64
NG
Sbjct: 443 NG 444
>gi|255686012|gb|ACU28495.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 133
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 58 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 117
Query: 61 LING 64
L+NG
Sbjct: 118 LLNG 121
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 25 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 84
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 85 HGYSTQLK 92
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARE 41
M+ A + ++M+ GV+PD T N+L++G C +++ E
Sbjct: 93 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVME 133
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+++G+ P+ T N+L+D A+ + A SM C + +++SI
Sbjct: 418 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSI 477
Query: 61 LING 64
LING
Sbjct: 478 LING 481
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M ++ V P +T A++DG DR D A L SKG + + +S LI
Sbjct: 350 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 409
Query: 63 NG 64
+G
Sbjct: 410 DG 411
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING----GS 66
+I+RG PD + N MD A ++ R + + S G D S+SILI+G G
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312
Query: 67 AR 68
AR
Sbjct: 313 AR 314
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M + P+ T N ++D C A + + A ++ S +GC D ++
Sbjct: 138 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 197
Query: 61 LING 64
LI+G
Sbjct: 198 LIDG 201
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + + M Q+G D NA++DGFC + + +A E+L M K + ++ ++
Sbjct: 315 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 374
Query: 63 NG 64
+G
Sbjct: 375 DG 376
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M+ RG NP+ T NA++ G CL D AR LL M G K++ +H
Sbjct: 284 LNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLS 343
Query: 61 LINGGS 66
++ G S
Sbjct: 344 ILKGLS 349
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVS-MGSKGCKQDAFSHS 59
+D A + + MI P+ TCN L++G+C + AR L M SK C D ++S
Sbjct: 216 IDNARKVFDEMI---CEPNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYS 272
Query: 60 ILING 64
LI+G
Sbjct: 273 TLIDG 277
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L +M + PDT T + L+DG+C + AR+ + M +GC + ++++ +I G
Sbjct: 255 LCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYG 312
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A GL M +RGV PD T L+ G+C+ + D+A +L +M ++ + D +++ LI
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443
Query: 63 NG 64
+G
Sbjct: 444 DG 445
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A L + M+ +G+ P T N+++ G C + +D+A E+ M G D S +IL
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267
Query: 62 INGGSARI 69
I GG R+
Sbjct: 268 I-GGFCRV 274
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M+ + + PD T N L+DG C D+A +L M S+ + ++SI
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 476
Query: 61 LIN 63
LI+
Sbjct: 477 LID 479
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L +M + V PD T N L++GF + A + M +KG + D +++
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 616
Query: 61 LING 64
+ING
Sbjct: 617 MING 620
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + MI +G+ P+ T N+++ G+C + + ++ L M D +++
Sbjct: 487 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 546
Query: 61 LING 64
LI+G
Sbjct: 547 LIHG 550
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + + M+ G PD T N L++G C R A LL M +G D + +
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406
Query: 61 LING 64
LI+G
Sbjct: 407 LIHG 410
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A+G+ M+ RG+ P+ T AL+ G+C ++ D A +L M GC+ + ++++
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580
Query: 61 LING 64
LI+G
Sbjct: 581 LIHG 584
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + + G+ PDT T +++ G+C D A E+ M +GC+ +A ++S LI
Sbjct: 246 DAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLI 305
Query: 63 NG 64
NG
Sbjct: 306 NG 307
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA M + GV P T A + C R + A ++ + M KGCK + ++++
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373
Query: 61 LING 64
LI+G
Sbjct: 374 LISG 377
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A GL M + GV P+T T NALM+ D A + MG GC + S++ LI
Sbjct: 384 AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIR 443
Query: 64 G 64
G
Sbjct: 444 G 444
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ + M+++G++P ST N+L+ + R D A ++ + KG DA +++I
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401
Query: 61 LING 64
LING
Sbjct: 402 LING 405
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M + V PD T N +M G C + + AREL M +G K D S + LI+G S R
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRR 549
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G NP T NAL+ G C D A ELL M SKG D ++ LI G
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M GV P+ T N ++ G+C + R + A +L +M + + D+F++ LI+G
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISG 300
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + M ++ + PD+ T +L+ G C R + A ++ M KG + A ++
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 61 LING 64
LI+G
Sbjct: 332 LIDG 335
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L + + GV PD NAL+DG C A ELL M D + +
Sbjct: 447 MKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT 506
Query: 61 LING 64
++ G
Sbjct: 507 IMQG 510
>gi|357120336|ref|XP_003561883.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62590-like [Brachypodium distachyon]
Length = 525
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G + M+ GV P + ++ G+C + A +L+ M GC+ D S+S+
Sbjct: 162 LEEARGFLDHMVDEGVRPTVRSYTTILRGYCQQGKILEAEKLVDDMVDAGCQPDVVSYSV 221
Query: 61 LING 64
LI G
Sbjct: 222 LIEG 225
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ G PD + + L++G C FD+ +L KG +A +++I +
Sbjct: 199 EAEKLVDDMVDAGCQPDVVSYSVLIEGLCSVREFDKVERILRESEDKGWTPNAITYNIYM 258
Query: 63 NG 64
+G
Sbjct: 259 SG 260
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA+ L + M+ RG+ P+ T L+DG C + D A E+ M S+G D +++
Sbjct: 222 MDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNT 281
Query: 61 LING 64
LI G
Sbjct: 282 LIYG 285
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M+ +G +PD T N L+ G C +A++L M KG K D +++
Sbjct: 257 LDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTT 316
Query: 61 LING 64
LI+G
Sbjct: 317 LIDG 320
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M GV PD T + L++G C + D A +L M +G + + +
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTT 246
Query: 61 LING 64
LI+G
Sbjct: 247 LIDG 250
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P + N LM+G+ D L +M + G + D +++S+LING
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLING 215
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A M Q + P NAL++G+C+ R D AREL+ M +KG K D ++S
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407
Query: 61 LING 64
+++
Sbjct: 408 ILSA 411
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ L + MI G+ PD T +L+DG C +RA L M G D ++S+
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSV 512
Query: 61 LINGGSARIR 70
LING S R
Sbjct: 513 LINGLSKSAR 522
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M +GV PD T + ++ +C A +L M G DA ++S
Sbjct: 383 MDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSS 442
Query: 61 LI 62
LI
Sbjct: 443 LI 444
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A GL M +RGV PD T L+ G+C+ + D+A +L +M ++ + D +++ LI
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382
Query: 63 NG 64
+G
Sbjct: 383 DG 384
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A L + M+ +G+ P T N+++ G C + +D+A E+ M G D S +IL
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206
Query: 62 INGGSARI 69
I GG R+
Sbjct: 207 I-GGFCRV 213
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M+ + + PD T N L+DG C D+A +L M S+ + ++SI
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 415
Query: 61 LIN 63
LI+
Sbjct: 416 LID 418
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L +M + V PD T N L++GF + A + M +KG + D +++
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555
Query: 61 LING 64
+ING
Sbjct: 556 MING 559
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + MI +G+ P+ T N+++ G+C + + ++ L M D +++
Sbjct: 426 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 485
Query: 61 LING 64
LI+G
Sbjct: 486 LIHG 489
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + + M+ G PD T N L++G C R A LL M +G D + +
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 61 LING 64
LI+G
Sbjct: 346 LIHG 349
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M++ G+ +T CN+L++G+C ++A E+LVSM K D++ ++
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNT 436
Query: 61 LING 64
L++G
Sbjct: 437 LLDG 440
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M + P+ T N+L+DG+ A+++L M KG +++ ++++
Sbjct: 272 VDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTL 331
Query: 61 LINGGSAR 68
LI G R
Sbjct: 332 LIKGYCKR 339
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + +MI++GV P+ T +LMDG+ L ++A+ + ++ +G + S+S++I
Sbjct: 282 KATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMI 341
Query: 63 NG 64
NG
Sbjct: 342 NG 343
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M G+ PD ST L+DG C R A+ + + KG + +++
Sbjct: 420 VDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTV 479
Query: 61 LING 64
+ING
Sbjct: 480 MING 483
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M VNP+ T N L+DG C +A +L M +G + + +++
Sbjct: 245 LKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTS 304
Query: 61 LING 64
L++G
Sbjct: 305 LMDG 308
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M + + P+T T ++L+DG C + R +L+ + ++G + +++
Sbjct: 350 VDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNS 409
Query: 61 LING 64
L+NG
Sbjct: 410 LLNG 413
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MI + + P+ T N+L+ GFC+ + A LL M + ++ +ILI
Sbjct: 212 DAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILI 271
Query: 63 NG 64
+G
Sbjct: 272 DG 273
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G P+T +AL+DG C + D A+E L+ M +KG ++F++S L+ G
Sbjct: 376 MVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWG 429
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A+ L + M +G P+ T N+L+ G CL + D+A LL M + C + +
Sbjct: 261 LSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGT 320
Query: 61 LING 64
L++G
Sbjct: 321 LVDG 324
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ P+ T L+DGF R +LVS+ KG + + FS+S
Sbjct: 296 LDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSS 355
Query: 61 LING 64
LI+G
Sbjct: 356 LISG 359
>gi|255686078|gb|ACU28528.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 147
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 56 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 115
Query: 61 LING 64
L+NG
Sbjct: 116 LLNG 119
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 91 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 147
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 23 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 82
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 83 HGYSTQLK 90
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M+Q G+ P+ T AL DG C + D A ELL M KG + + +++
Sbjct: 166 MEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNS 225
Query: 61 LING--GSARIRK 71
L+NG S IR+
Sbjct: 226 LVNGLCKSGNIRQ 238
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L M+++G+ P+T+T N+LM +C+ + E+ M ++G D+ +++I
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365
Query: 61 LING 64
LI G
Sbjct: 366 LIKG 369
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E M G+ PDT T LMD +C +A ELL M +G + + ++L+
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLM 297
Query: 63 NG 64
NG
Sbjct: 298 NG 299
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ L M+ RG+ P T N LM+GFC++ + LL M KG + +++
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330
Query: 61 LI 62
L+
Sbjct: 331 LM 332
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ + M RGV PD T L+DG+C + ++A L M G + +++
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190
Query: 61 LING 64
L +G
Sbjct: 191 LADG 194
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + MI +G+ PDT L+DGFC A +L M + D +++
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 61 LING 64
+I G
Sbjct: 121 VICG 124
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EANG+ M++ G+ P T NAL++G+C R A ELL M + CK + + +
Sbjct: 352 IEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 61 LING 64
L+ G
Sbjct: 412 LMEG 415
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA GL + M ++G P T T L+ C D+A L M ++GCK + ++++
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTV 341
Query: 61 LING 64
LI+G
Sbjct: 342 LIDG 345
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+ G++PD + N L+DG C + A +LL SM S + D + + +IN
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L +M +R P+ T N LM+G C + +A LL M G D S+++LI+G
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + MI RG P+ T L+DG C + + A + M G +++
Sbjct: 317 IDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNA 376
Query: 61 LING 64
LING
Sbjct: 377 LING 380
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L +MI RG+ P+ ST N L+ G C AR L+ M SK D +++I
Sbjct: 349 MEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNI 408
Query: 61 LIN 63
LI+
Sbjct: 409 LID 411
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M+ +G+ P+ T N L+DGFC + A + M +G + + +++I
Sbjct: 209 MYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNI 268
Query: 61 LING 64
LING
Sbjct: 269 LING 272
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M ++G+NP T N LMDG+C A + M KG + + +H++LI
Sbjct: 421 KAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLI 480
Query: 63 NG 64
G
Sbjct: 481 KG 482
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ + P+ T N L++GFC + A L M +G +A +++
Sbjct: 279 VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTT 338
Query: 61 LING 64
LI+
Sbjct: 339 LIDA 342
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G+ P+ T N L++G C + D A L M S + + +H++LING
Sbjct: 254 MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFD---RARELLVSMGSKGCKQDAFS 57
++ A + E M GV+P+ T N L+DG+C R +A +L M +KG + +
Sbjct: 171 LNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVT 230
Query: 58 HSILING 64
++ILI+G
Sbjct: 231 YNILIDG 237
>gi|255686016|gb|ACU28497.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686018|gb|ACU28498.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686020|gb|ACU28499.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686022|gb|ACU28500.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686024|gb|ACU28501.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686026|gb|ACU28502.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686028|gb|ACU28503.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686030|gb|ACU28504.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686036|gb|ACU28507.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686038|gb|ACU28508.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686040|gb|ACU28509.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686042|gb|ACU28510.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686044|gb|ACU28511.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686048|gb|ACU28513.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686050|gb|ACU28514.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686052|gb|ACU28515.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686054|gb|ACU28516.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686056|gb|ACU28517.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 58 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 117
Query: 61 LING 64
L+NG
Sbjct: 118 LLNG 121
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
M+ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 93 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 149
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 25 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 84
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 85 HGYSTQLK 92
>gi|255660968|gb|ACU25653.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 376
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM+G C + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG AF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLGAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|255686008|gb|ACU28493.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 145
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 58 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 117
Query: 61 LING 64
L+NG
Sbjct: 118 LLNG 121
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 25 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 84
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 85 HGYSTQLK 92
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC 51
M+ A + ++M+ GV+PD T N+L++G C +++ E +M KGC
Sbjct: 93 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGC 143
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A ++M+ RG PD T N L+ C + D A E+L +GSKGC +++
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462
Query: 61 LINGGS 66
+I+G S
Sbjct: 463 VIDGLS 468
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N L++G C R D A L M S GC+ + +H+I++
Sbjct: 265 QAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIIL 324
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + GV P+ T N++M G C A + RA + L M ++GCK S+ I
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567
Query: 61 LING 64
LI G
Sbjct: 568 LIEG 571
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + +QR PD T L++ C +A +LL M KGCK D ++++
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 61 LING 64
LING
Sbjct: 288 LING 291
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M Q G P++ + N L+ C + +RA E L M S+GC D +++ L+
Sbjct: 376 EKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTA 431
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA M G P+ T N ++ C R+ A + L M KGC + +I
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357
Query: 61 LIN 63
LIN
Sbjct: 358 LIN 360
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E E M+ RG PD C +L+ G C + +A ++ + G D ++++
Sbjct: 126 LEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNV 185
Query: 61 LING 64
LI+G
Sbjct: 186 LISG 189
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A+ M RGV P+ T N L++G C D+AR+LL S+ G K D F+ S
Sbjct: 445 MDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSS 504
Query: 61 LING 64
+++G
Sbjct: 505 IVDG 508
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L M + G++PDT + NAL+ FC ++ ++A++L SM G D +++S I S
Sbjct: 556 LLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALS 615
Query: 67 ARIR 70
R
Sbjct: 616 ESGR 619
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M + G+NPD T +A ++ + R + A+++ SM + GC D++ ++
Sbjct: 585 VEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNL 644
Query: 61 LI 62
+I
Sbjct: 645 II 646
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E +++ G+ PD T ++++DG C R + A E M G +A ++I
Sbjct: 480 IDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNI 539
Query: 61 LI 62
LI
Sbjct: 540 LI 541
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +G P+ T L++GFC+A R D A + +M G + +
Sbjct: 230 VDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRA 289
Query: 61 LING 64
L++G
Sbjct: 290 LVHG 293
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L +LM G P+ T N ++D C D+ARELL S+ S+GCK + +++ ++ G
Sbjct: 3 LIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M G PD T N L+ G C AD+++ A EL++ M C D + +
Sbjct: 137 VDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNT 196
Query: 61 LIN 63
+I+
Sbjct: 197 IIS 199
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M + G + T NA++ G C D A ELL +M S GCK D +++ L+ G
Sbjct: 110 EKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKG 165
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + RG P+T N ++ G C +R+ A ELL M + C + + ++
Sbjct: 32 VDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEMVRENCPPNEATVNV 91
Query: 61 LIN 63
++N
Sbjct: 92 IVN 94
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD 54
M ++G NP+++T + ++ G A + ++A ELL M SKG D
Sbjct: 217 MPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTD 260
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + + MI+ G+ PD ST NA++ R+++A +L M + CK D S+S L
Sbjct: 482 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSL 541
Query: 62 ING 64
++
Sbjct: 542 LHA 544
>gi|255686068|gb|ACU28523.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686070|gb|ACU28524.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686072|gb|ACU28525.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686074|gb|ACU28526.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686076|gb|ACU28527.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 58 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 117
Query: 61 LING 64
L+NG
Sbjct: 118 LLNG 121
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 93 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 149
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 25 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 84
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 85 HGYSTQLK 92
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + +L + G++PD N LMDG+CL + ++A + +M S G + + + L+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Query: 63 NG 64
NG
Sbjct: 579 NG 580
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M+QRG+ PD T ++++ C A D+A L M +KG D ++++
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 61 LINGGSA 67
LI G S+
Sbjct: 297 LIYGYSS 303
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M ++ + PD N LM C + AR++ +M KG D FS++I++
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368
Query: 63 NGGSAR 68
NG + +
Sbjct: 369 NGYATK 374
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M+ G+ P+ L++G+C R D L M KG K ++I
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611
Query: 61 LING 64
+I+G
Sbjct: 612 IIDG 615
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHSILI 62
+++ G+ D + L+ GFC A R D A ++L+ + GC D FS++IL+
Sbjct: 139 LLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILL 191
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A MI +GV PD + L+ GFC +A+EL+ + + G + D
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 61 LIN 63
+IN
Sbjct: 507 IIN 509
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M+Q+G+ P T N ++DG A R A+ M G + ++SI
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
Query: 61 LING 64
++ G
Sbjct: 647 VLRG 650
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + ELM Q G D++T L+DGFC +++ +L KG DAF++S
Sbjct: 75 VDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + MI+ G P+ N L++GF +FD A + MGS C +++
Sbjct: 145 LDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P T N L++G C +RF A +L+ M KG K ++S+L+ G
Sbjct: 196 SPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKG 243
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G P T + LM G C + + A +L + S G K D +ILI
Sbjct: 217 EAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
>gi|255686046|gb|ACU28512.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686058|gb|ACU28518.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686060|gb|ACU28519.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686062|gb|ACU28520.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686064|gb|ACU28521.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686066|gb|ACU28522.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 58 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 117
Query: 61 LING 64
L+NG
Sbjct: 118 LLNG 121
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 93 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 149
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S
Sbjct: 29 LASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 88
Query: 67 ARIR 70
+++
Sbjct: 89 TQLK 92
>gi|255686010|gb|ACU28494.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 148
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 57 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 116
Query: 61 LING 64
L+NG
Sbjct: 117 LLNG 120
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 92 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 148
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S
Sbjct: 28 LASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 87
Query: 67 ARIR 70
+++
Sbjct: 88 TQLK 91
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 8 AELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
AE++ +PD T N L+DGFC A RA E+L M + D +++IL+NG
Sbjct: 225 AEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 281
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQ--DAFSHS 59
D+A L E M VNPD T N ++ G C + ++ARELL M +G K D +++
Sbjct: 114 DQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYN 173
Query: 60 ILINGG 65
LIN G
Sbjct: 174 TLINAG 179
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC 51
+ +A L ++ RG PD T N L+DG C A+R A +L M S GC
Sbjct: 367 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGC 417
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M ++ P+ +L+DG C +DR D A +L +M +G D F++
Sbjct: 437 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRK 496
Query: 61 LI 62
LI
Sbjct: 497 LI 498
>gi|449453638|ref|XP_004144563.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Cucumis sativus]
gi|449500125|ref|XP_004161011.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Cucumis sativus]
Length = 360
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L L+ ++G P+ A++DGFC A++FD A + M G +AFS +
Sbjct: 206 IQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGV 265
Query: 61 LING 64
LI G
Sbjct: 266 LIQG 269
>gi|255686014|gb|ACU28496.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 119
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 50 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 109
Query: 61 LING 64
L+NG
Sbjct: 110 LLNG 113
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 17 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 76
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 77 HGYSTQLK 84
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M RG PD T A+++GF A +AR++L M GCK + S++
Sbjct: 309 MDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTA 368
Query: 61 LING 64
+ G
Sbjct: 369 FLKG 372
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA +RG D +A++D +C R D+A+E++ M ++GC D +++ +
Sbjct: 275 DEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAI 334
Query: 62 INGGS 66
ING S
Sbjct: 335 INGFS 339
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+++A E M G+ P+ T N L+ G+C R + A EL+ M KGC D S+
Sbjct: 169 LEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSY 226
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + +++ + D T N+LMDG+CL ++A+++ SM S+G + S++ +I
Sbjct: 298 EAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMI 357
Query: 63 NG 64
NG
Sbjct: 358 NG 359
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG P+ T N+++D C D+A LL ++ +G + D +++++LI G
Sbjct: 407 LVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKG 464
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G N D T ++ GFC+ FD A LL M GC +A ++ I
Sbjct: 471 LEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEI 530
Query: 61 LI 62
+I
Sbjct: 531 VI 532
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ + ++PD TCN+L+ GFC+ + A LL M + ++ SI
Sbjct: 226 VNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSI 285
Query: 61 LING 64
L++
Sbjct: 286 LVDA 289
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +G+ PD T L+ G C + + + A+++ + KG D +++++
Sbjct: 436 VDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTV 495
Query: 61 LING 64
+I G
Sbjct: 496 MIQG 499
>gi|255686032|gb|ACU28505.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 142
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 51 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 110
Query: 61 LING 64
L+NG
Sbjct: 111 LLNG 114
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
M+ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 86 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 142
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 18 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 77
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 78 HGYSTQLK 85
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L LM +RG+ PD T +D C ++R + AR L S+ +G + +S+
Sbjct: 343 LDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSV 402
Query: 61 LING 64
LI+G
Sbjct: 403 LIDG 406
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+ + +P+ T NAL+ G C A A L M G K ++ +I
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472
Query: 61 LI 62
LI
Sbjct: 473 LI 474
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + + + GV+ + + L+DG+C + D A L M SK C +A++ +
Sbjct: 378 VEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNA 437
Query: 61 LING 64
LI+G
Sbjct: 438 LIHG 441
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + M+ G P T NA ++ +C A + A +++V M +G D F+++ L
Sbjct: 484 DDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSL 543
Query: 62 I 62
I
Sbjct: 544 I 544
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A GL + M++R + PD T N+L+ G C A D A LL M +G D ++ I
Sbjct: 310 KAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFI 369
Query: 63 N 63
+
Sbjct: 370 D 370
>gi|255685998|gb|ACU28488.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 144
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 53 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 112
Query: 61 LING 64
L+NG
Sbjct: 113 LLNG 116
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 88 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 144
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S
Sbjct: 24 LASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 83
Query: 67 ARIR 70
+++
Sbjct: 84 TQLK 87
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M +RG PD + NA +DG C A+R +A+ + M +GC +A S+S+LI
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M RG PD T N+ + G C DR D AR+ L M D S++
Sbjct: 163 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTT 219
Query: 61 LING 64
+ING
Sbjct: 220 VING 223
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ + + M RG PD T ++L+DGFC +RA LL SM GC+ + +++
Sbjct: 230 LDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 289
Query: 61 LI 62
L+
Sbjct: 290 LL 291
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + + MI + PD T L+ G C +++ ++AR+LL M GC D ++ L
Sbjct: 24 DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83
Query: 62 INGGS 66
I+G S
Sbjct: 84 ISGYS 88
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LAE M++ P T ++DG C A+R A +LL M KGC + +++++++ G
Sbjct: 100 LAE-MVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEG 156
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 3 EANGLAELMIQRGVNPDTSTCN----------ALMDGFCLADRFDRARELLVS-MGSKGC 51
+A + + M++RG P+ S+ + L+DG C RFD A L + K C
Sbjct: 337 KAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 396
Query: 52 KQDAFSHSILINGGSAR 68
+ D F ++++++ R
Sbjct: 397 EPDVFFYNVMLDSHCKR 413
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 8 AELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
AE++ +PD T N L+DGFC A RA E+L M + D +++IL+NG
Sbjct: 259 AEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQ--DAFSHS 59
D+A L E M V P+ T N ++ G C + ++ARELL M KG K D +++
Sbjct: 114 DQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYN 173
Query: 60 ILING--GSARIRK 71
LIN ++RIR+
Sbjct: 174 TLINAFYRASRIRE 187
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC 51
+ +A L ++ RG PD T N L+DG C A+R A +L M S+GC
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E ++++G PD +L+DG C + + A +L+ M +GC+ +S L++G
Sbjct: 328 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSG 385
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA E M G+NPD TCN L+ G C + A E+L M G D +++ +I
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Query: 63 NG 64
+
Sbjct: 247 HA 248
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L + M RG ++L+ G+C A +ARE+L M S F+++I
Sbjct: 357 IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416
Query: 61 LING 64
++ G
Sbjct: 417 VLGG 420
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA+ M RG P+ T +++ G C R D A L+V M K + ++ LI
Sbjct: 464 EACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523
Query: 63 NG 64
+G
Sbjct: 524 DG 525
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M ++ P+ +L+DG C +DR D A +L +M +G D F++
Sbjct: 497 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRK 556
Query: 61 LI 62
LI
Sbjct: 557 LI 558
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M +G PD NALM G A + A LL M GC D SH+I
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNI 554
Query: 61 LING 64
++NG
Sbjct: 555 ILNG 558
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M G+ PD T N L+ F A F+ A L+ M KG + DA ++S +++
Sbjct: 573 ETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDA 628
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ E + + M GV+P T + L+DG+C +R ++A LL M KG ++
Sbjct: 390 VSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 61 LING-GSAR 68
LIN G A+
Sbjct: 450 LINALGKAK 458
>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 350
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM+G C + +RA +L + SKG K D H+ILI
Sbjct: 191 EAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILI 250
Query: 63 NG 64
+G
Sbjct: 251 HG 252
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 49 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 108
Query: 61 LING 64
+ING
Sbjct: 109 MING 112
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 119 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 178
Query: 61 LING 64
LING
Sbjct: 179 LING 182
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 84 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 143
Query: 61 LING 64
LING
Sbjct: 144 LING 147
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L M+ RG++PD T N L+ G+C + +R LL M G D+F+ +L+
Sbjct: 346 EAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLV 405
Query: 63 NG 64
G
Sbjct: 406 EG 407
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L ++M +RGV PD + ALM+G C R A +L M +G D +++
Sbjct: 309 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 368
Query: 61 LING 64
LI+G
Sbjct: 369 LIHG 372
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+ N E M + G +PD T N L++ +C R D A L M +G D S++ L+
Sbjct: 276 KVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALM 335
Query: 63 NG--GSARIRK 71
NG R+R+
Sbjct: 336 NGLCKEGRVRE 346
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC--KQDAFSH 58
M E+ L MI G++PD+ TC L++G+ +F A L+V + G QD +S+
Sbjct: 379 MQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY 438
Query: 59 SIL 61
I+
Sbjct: 439 LIV 441
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L M+ G+ PD C AL G+C + D+A LL + D S + LI
Sbjct: 521 EGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALI 580
Query: 63 NGGSAR 68
SA+
Sbjct: 581 RITSAK 586
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EAN ELMIQ G D + N L+ C + + A ELL M G + D ++ SI
Sbjct: 273 MQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKINDAFELLNMMEEGGLESDEYTFSI 332
Query: 61 LING 64
L+NG
Sbjct: 333 LVNG 336
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + I+ G+ PD T N L+ +C D D ++ M G + DA +++
Sbjct: 28 LDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMREAGVRPDAVTYNS 87
Query: 61 LINGG 65
LI G
Sbjct: 88 LITGA 92
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ + E MI+RGV P+ T L+DG C + A +LL M K + +A +++I
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 61 LIN 63
+IN
Sbjct: 358 IIN 360
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L + +++RG +P T N L+ GFC + A E+ M +G + + ++++
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 61 LING 64
LI+G
Sbjct: 323 LIDG 326
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M + PD + N ++DG A A LLV M G D F++S
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 61 LIN 63
LIN
Sbjct: 605 LIN 607
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM--GSKGCKQDAFSHSI 60
+A + ELM +R PD T N L+ G C D A +LL M S D S++
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 61 LING 64
LI+G
Sbjct: 430 LIHG 433
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M+ G PD T +++GFC D A LL SM + GCK + S++I
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 61 LING 64
++ G
Sbjct: 443 VLKG 446
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M G+ P+ N L+ G C A+R++ ELL M K C D + +IL++
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A+R+ A +L+ M +GC + + +
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 477
Query: 61 LIN 63
LIN
Sbjct: 478 LIN 480
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M++ P+ T N L+ C F+R E+L M GC D ++ +I+G
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDG 306
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E L M + D T N L+D FC DR ELL M GC D +++ +
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTV 408
Query: 62 ING 64
ING
Sbjct: 409 ING 411
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G + T N L++ C ++A ELL M GC D S+S +I
Sbjct: 455 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514
Query: 63 NG 64
+G
Sbjct: 515 DG 516
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG D CN +++ C D+A LL + S GC+ D S++ ++ G
Sbjct: 186 RGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKG 236
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G +PD T NALM G A D A L+ +M GC D SH+I++NG
Sbjct: 506 GCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNG 555
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M +GV+P+ T NAL+ G C + D A L M SKG + ++++I
Sbjct: 573 LDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTI 632
Query: 61 LINGGS 66
LIN S
Sbjct: 633 LINENS 638
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + MI+ G+ PD T L+ GFC A+EL M S+G K D +++
Sbjct: 398 LDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTT 457
Query: 61 LING 64
I G
Sbjct: 458 RIVG 461
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + +MI+ + P T N +MD C RA E+L M GC + S+++
Sbjct: 188 VNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNV 247
Query: 61 LINGGSAR 68
L+NG S +
Sbjct: 248 LVNGLSGK 255
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A G+ E M G PD T N L++G C FD A EL+ M +G D +++ +I
Sbjct: 470 KAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Query: 63 NG 64
+
Sbjct: 530 HA 531
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++M G +P+ + N L++G FDRA+EL+ M G K A +++ LI G
Sbjct: 231 DVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRG 286
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 30/65 (46%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EAN L M+ RG P T N +M C R AR L M ++ D S++ L
Sbjct: 294 EEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL 353
Query: 62 INGGS 66
I G S
Sbjct: 354 IYGYS 358
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + +L + G++PD N LMDG+CL + ++A + +M S G + + + L+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Query: 63 NG 64
NG
Sbjct: 579 NG 580
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M+QRG+ PD T ++++ C A D+A L M +KG D ++++
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 61 LINGGSA 67
LI G S+
Sbjct: 297 LIYGYSS 303
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M ++ + PD N LM C + AR++ +M KG D FS++I++
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368
Query: 63 NGGSAR 68
NG + +
Sbjct: 369 NGYATK 374
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M+ G+ P+ L++G+C R D L M KG K ++I
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611
Query: 61 LING 64
+I+G
Sbjct: 612 IIDG 615
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHSILI 62
+++ G+ D + L+ GFC A R D A ++L+ + GC D FS++IL+
Sbjct: 139 LLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILL 191
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A MI +GV PD + L+ GFC +A+EL+ + + G + D
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 61 LIN 63
+IN
Sbjct: 507 IIN 509
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M+Q+G+ P T N ++DG A R A+ M G + ++SI
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
Query: 61 LING 64
++ G
Sbjct: 647 VLRG 650
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G+ M ++G PD T N ++D + R RAR+LL +M GC D ++++IL+
Sbjct: 259 EAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILL 318
Query: 63 NGG 65
+
Sbjct: 319 DAA 321
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + G +P++ T N+L+ + R+++A L V M +GC D ++++
Sbjct: 187 LDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNT 246
Query: 61 LIN 63
+I+
Sbjct: 247 VID 249
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 6 GLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN-- 63
GL E M Q GV P+ T N +++ FD A ++L M + C + S++ +IN
Sbjct: 122 GLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSL 181
Query: 64 GGSARI 69
G S R+
Sbjct: 182 GRSGRL 187
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+++G+ P+ T N+L+D A+ + A SM C + +++SI
Sbjct: 550 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSI 609
Query: 61 LING 64
LING
Sbjct: 610 LING 613
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + E M ++ V P +T A++DG DR D A L SKG + + +S LI
Sbjct: 482 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 541
Query: 63 NG 64
+G
Sbjct: 542 DG 543
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M + P+ T N ++D C A + + A ++ S +GC D ++
Sbjct: 270 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 329
Query: 61 LING 64
LI+G
Sbjct: 330 LIDG 333
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E + + M Q+G D NA++DGFC + + +A E+L M K + ++ ++
Sbjct: 447 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506
Query: 63 NG 64
+G
Sbjct: 507 DG 508
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING----GS 66
+I+RG PD + N MD A ++ R + + S G D S+SILI+G G
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444
Query: 67 AR 68
AR
Sbjct: 445 AR 446
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella
moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella
moellendorffii]
Length = 500
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-GSKGCKQDAFSHSI 60
D A L ELM G++PD T AL+ GFC +RA E+ M S C+ D F + +
Sbjct: 29 DAARAL-ELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIFQEMIKSNRCQPDCFLYGV 87
Query: 61 LINGGSARIR 70
LI+G +R
Sbjct: 88 LIDGYCKELR 97
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELL-VSMGSKGCKQDAFSHSILINGG 65
L E+ ++R + PD N+++DG C ++RF A + L +M +GC +++ LI G
Sbjct: 105 LREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGA 164
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E + + E M ++G PDT T N L++GFC+ + + A +L M KG K D S++++
Sbjct: 275 NEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDSESAYRVLDEMVEKGLKPDVISYNMI 334
Query: 62 INGGSARIRK 71
+ G RI+K
Sbjct: 335 L-GVLFRIQK 343
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK 52
+EA L E M +RG +PDT + + DG C +F+ A +L M KG K
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAAILDEMLFKGYK 395
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ D++ + L+ A R + +L M KGCK D ++++LING
Sbjct: 254 IKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPDTVTYNVLING 302
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G+ PD + N ++ +++ A L M +GC D S+ I+ +G
Sbjct: 319 MVEKGLKPDVISYNMILGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDG 372
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + +L + G++PD N LMDG+CL + ++A + +M S G + + + L+
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579
Query: 63 NG 64
NG
Sbjct: 580 NG 581
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M + + PD T + LM C + AR++ +M KG D FS++I++
Sbjct: 310 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 369
Query: 63 NGGSAR 68
NG + +
Sbjct: 370 NGYATK 375
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M+QRG+ PD T N+++ C A D+A L M +K + ++++
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 297
Query: 61 LINGGSA 67
LI G S+
Sbjct: 298 LIYGYSS 304
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK-GCKQDAFSHSILI 62
+++ G+ + N L++GFC A R D A ++L+ + GC D FS+SIL+
Sbjct: 140 LLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 192
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A MI +GV PD N L+ GFC +A+EL+ + + G D S
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 507
Query: 61 LIN 63
+IN
Sbjct: 508 IIN 510
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M+ G+ P+ L++G+C R D L M +G K +SI
Sbjct: 553 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 612
Query: 61 LING 64
+I+G
Sbjct: 613 IIDG 616
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M+QRG+ P T + ++DG A R A+ M G D +++I
Sbjct: 588 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNI 647
Query: 61 LING 64
++ G
Sbjct: 648 VLRG 651
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + + +G+ P+ +T N L+DG C RF+ A+ + + KG K ++++I
Sbjct: 396 VDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNI 455
Query: 61 LING 64
+ING
Sbjct: 456 MING 459
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +G+ PD T ++L+DG C ++R A ELL M ++G D +++
Sbjct: 326 VDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTS 385
Query: 61 LING 64
++
Sbjct: 386 FLHA 389
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + +++ G +PDT T L+ G CL + A + ++G + + S+ I
Sbjct: 99 MDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGI 158
Query: 61 LING 64
LING
Sbjct: 159 LING 162
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L MI + V+PD T +AL+ GFC+ +F A L M D + +IL+
Sbjct: 206 EAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILV 265
Query: 63 NG 64
+
Sbjct: 266 DA 267
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
++ +G T N +++G CL FD A LL M GC D ++ +I
Sbjct: 441 LLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETII 492
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M+ G PD T +++GFC D A LL SM S GCK + S++I
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 61 LING 64
++ G
Sbjct: 432 VLKG 435
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M Q+ D T N L+D FC DR ELL M S GC D +++ +I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Query: 63 NG 64
NG
Sbjct: 399 NG 400
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G P+ T N L++ C ++A ELL M GC D S+S +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503
Query: 63 NG 64
+G
Sbjct: 504 DG 505
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ AN + M G+ P+ N ++ G C A+R+ A ELL M K C D + +I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 61 LIN 63
L++
Sbjct: 362 LVD 364
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A R+ A EL+ M +GC + + +
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 61 LIN 63
LIN
Sbjct: 467 LIN 469
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M++ P+ T N L+ C F+R E+L M GC D ++ +I+G
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 41/64 (64%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M++ G+ +T CN+L++G+C ++A E+LVSM K D++ ++
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNT 436
Query: 61 LING 64
L++G
Sbjct: 437 LLDG 440
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + MI G+ P+ NAL++G C + DRAR L + KG +++
Sbjct: 797 VNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNT 856
Query: 61 LING 64
LI+G
Sbjct: 857 LIDG 860
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + ++G++P T N L+DG+C R A EL M +G + ++S
Sbjct: 832 LDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYST 891
Query: 61 LING 64
LI+G
Sbjct: 892 LIHG 895
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M + P+ T N+L+DG+ A+++L M KG +++ ++++
Sbjct: 272 VDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTL 331
Query: 61 LINGGSAR 68
LI G R
Sbjct: 332 LIKGYCKR 339
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L MI +G +P+ +T N ++ GFC R D A +L M G D S++I
Sbjct: 584 MEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNI 643
Query: 61 LI 62
LI
Sbjct: 644 LI 645
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L LM Q GV P+ T L G C R DRA+E+ ++G K + +++ L
Sbjct: 410 EEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTL 469
Query: 62 ING 64
+NG
Sbjct: 470 LNG 472
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + RG+ P+ T N L++G+C R A ++L M C D +++
Sbjct: 444 LDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTT 503
Query: 61 LING 64
LI G
Sbjct: 504 LIQG 507
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G+ + M + G P+ T NAL+ G C R + A EL+ M G + ++++I
Sbjct: 374 IEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTI 433
Query: 61 LING 64
L +G
Sbjct: 434 LTHG 437
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L + MIQ PD T ++ C ++A +L M GC+ + ++++
Sbjct: 339 MEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNA 398
Query: 61 LING 64
LI G
Sbjct: 399 LIQG 402
>gi|255685990|gb|ACU28484.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
gi|255686004|gb|ACU28491.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 119
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++ L+
Sbjct: 30 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNSLL 89
Query: 63 NG 64
NG
Sbjct: 90 NG 91
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 63 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 119
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S +++
Sbjct: 3 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 62
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA +++I GV P+ + N L+DG+C + D + + M S G + D+++++ L+
Sbjct: 501 EAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560
Query: 63 NG 64
NG
Sbjct: 561 NG 562
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + MI +G PD T ++L+DG C A ++A +L M KG + +++I
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNI 278
Query: 61 LING 64
+I G
Sbjct: 279 MIRG 282
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M +GV P+T T N ++ G+C + + A LL M G + D ++ +
Sbjct: 254 MNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYIL 313
Query: 61 LIN 63
LI
Sbjct: 314 LIQ 316
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG---CKQDAFSHSILING 64
M + G PD + NAL+ G C+ + A ELL+ M + G C + S+S +I+G
Sbjct: 156 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDG 212
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LA MI RG++PD N +MD C R A++ + G K + S++ LI+G
Sbjct: 470 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDG 527
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDE+ + M+ G+ PD+ T NAL++G+ R + A L M K K A + +I
Sbjct: 534 MDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 593
Query: 61 LING 64
+++G
Sbjct: 594 ILHG 597
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G+ PD T L+ +C R AR + SM KG K ++ + I
Sbjct: 289 LEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 348
Query: 61 LINGGSAR 68
L++G + +
Sbjct: 349 LLHGYATK 356
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
LAEL + G+ PDT N L+ GFC ++F R E+L M G K D +++ LI S
Sbjct: 547 LAELK-KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYAS 605
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 3 EANGLAELM-IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
E GL E M Q+G PDT T N L+DGFC A ++ +EL M +G + + + L
Sbjct: 401 EGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTL 460
Query: 62 ING 64
+ G
Sbjct: 461 VGG 463
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
+RG+ D T AL++ FC + F++A EL M GC DA + LI+G S
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFS 535
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L + M + GV P+ T N L+ G C R A V +G K DA +++
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494
Query: 61 LING 64
LIN
Sbjct: 495 LINA 498
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS-KGCKQDAFSHSILING 64
I V PD N L+DG C R L+ M S KGC D +++ LI+G
Sbjct: 375 ISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + +M++ + PD T N+LMDG+C ++ ++A+++ SM S G + ++
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346
Query: 61 LING 64
++NG
Sbjct: 347 MVNG 350
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M RG P+ T ++++D C D+A LL ++ +G + D ++++ILI G
Sbjct: 398 LVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E ++ +G N D ++ GFC FD+A LL M GC +A ++ +
Sbjct: 462 LEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYEL 521
Query: 61 LI 62
+I
Sbjct: 522 VI 523
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +G+ PD T L+ G C + R + A+ + + KG D +++++
Sbjct: 427 VDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTV 486
Query: 61 LING 64
+I G
Sbjct: 487 MIQG 490
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + +NP+ T N L+DGFC + + A+ +L M K D +++ L++G
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDG 315
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+ + + PD T NAL+ GF + + A +L M + + ++ +I
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276
Query: 61 LING 64
L++G
Sbjct: 277 LVDG 280
>gi|255686000|gb|ACU28489.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 128
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 37 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 96
Query: 61 LING 64
L+NG
Sbjct: 97 LLNG 100
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 72 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 128
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+
Sbjct: 5 AAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 64
Query: 64 GGSARIR 70
G S +++
Sbjct: 65 GYSTQLK 71
>gi|224099459|ref|XP_002311493.1| predicted protein [Populus trichocarpa]
gi|222851313|gb|EEE88860.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M G PD T L++ C R+D A EL + M ++ CK H ILING A R
Sbjct: 52 MKDEGFEPDVVTYGVLINARCKVRRYDDAIELFLEMEARNCKPSPHIHCILINGLGAEKR 111
>gi|255686034|gb|ACU28506.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 127
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++ L+
Sbjct: 38 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLL 97
Query: 63 NG 64
NG
Sbjct: 98 NG 99
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
M+ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 71 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 127
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 3 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 62
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 63 HGYSTQLK 70
>gi|255685986|gb|ACU28482.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 108
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++ L+
Sbjct: 25 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNSLL 84
Query: 63 NG 64
NG
Sbjct: 85 NG 86
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC 51
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC
Sbjct: 58 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGC 108
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
+G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S +++
Sbjct: 1 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 57
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + ++ RG+ PD T NA++ G C DRA + + + ++GC D S++I
Sbjct: 217 INEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNI 276
Query: 61 LI 62
L+
Sbjct: 277 LL 278
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + E+M ++G+ PD+ + + L+ FC R D A E L M S GC D +++ ++
Sbjct: 324 EAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTIL 383
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D AN + + M RG +PD T N ++ C + + A E++ + GCK +++I
Sbjct: 147 IDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTI 206
Query: 61 LING 64
LI
Sbjct: 207 LIEA 210
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA GL M P + N ++ G C A R ELL++M KGC + S+ +
Sbjct: 462 VDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVL 521
Query: 61 LING 64
LI G
Sbjct: 522 LIEG 525
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + RG NPD + N L+ F R++ L+ M GC+ + +HSIL
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSIL 312
Query: 62 ING 64
I+
Sbjct: 313 ISS 315
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
+PD + NA++ GF A++ D A ++ M S+G D +++I+I +R
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSR 179
>gi|255685996|gb|ACU28487.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 117
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++ L+
Sbjct: 28 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNSLL 87
Query: 63 NG 64
NG
Sbjct: 88 NG 89
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 61 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 117
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S +++
Sbjct: 1 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 60
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M++ G PD T +++GFC D A LL SM + GC+ + S++I++ G
Sbjct: 387 LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKG 444
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MI++G +P+ T N +++ C ++A ELL M GC D S+S +I
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVI 512
Query: 63 NG 64
+G
Sbjct: 513 DG 514
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + + M G+ P+ N ++ G C A+R+++A ELL M C D + +I
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNI 370
Query: 61 LIN 63
L++
Sbjct: 371 LVD 373
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 MDEA-NGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA L +L G +PD + NA++ G C+A R+ R ++L+ M GC + + +
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFN 264
Query: 60 ILI 62
LI
Sbjct: 265 TLI 267
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A+R+ A +L+ M +GC + + +
Sbjct: 416 IDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNT 475
Query: 61 LIN 63
+IN
Sbjct: 476 VIN 478
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M++ G P+ T N L+ C F+R ++L M GC D ++ +++G
Sbjct: 247 LMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDG 304
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L M D T N L+D FC R ELL M GC D +++ +
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406
Query: 62 ING 64
ING
Sbjct: 407 ING 409
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA A ++Q G++PDT T +L+ G C D A E+ + M KGC+++ S++ LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 63 NG 64
+G
Sbjct: 272 HG 273
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + M ++G+ P T NAL+DG+C D A E+L M S C + +++
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 61 LING 64
LI G
Sbjct: 410 LICG 413
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M ++G P+ T L+DG C ++ D AR++L M KG +++ LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 63 NG 64
+G
Sbjct: 377 DG 378
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + + +GV + AL+DG+C + D A LL M + C +++++++
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 61 LING 64
LI G
Sbjct: 550 LIEG 553
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M+ P++ T N L++G C + A L+ M + G K +++I
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Query: 61 LI 62
LI
Sbjct: 585 LI 586
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L LM + G+ PD T + +D C R + A L S+ +KG K + ++
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514
Query: 61 LING 64
LI+G
Sbjct: 515 LIDG 518
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M++R ++P T N+L+ G C + + A LL M G D +++S+ I
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481
Query: 63 N 63
+
Sbjct: 482 D 482
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + + M + G+ PD T L+DG+ RA + L M GCK + SI
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 61 LINGGSARIR 70
LI S R
Sbjct: 690 LIKNLSHENR 699
>gi|255685994|gb|ACU28486.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 120
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 29 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 88
Query: 61 LING 64
L+NG
Sbjct: 89 LLNG 92
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 64 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 120
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 8 AELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSA 67
A M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S
Sbjct: 1 ASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 60
Query: 68 RIR 70
+++
Sbjct: 61 QLK 63
>gi|302757523|ref|XP_002962185.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
gi|300170844|gb|EFJ37445.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
Length = 442
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + M+ GV PD +C +L+ +ADR D A +LL M G DA +++ L
Sbjct: 339 DEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNAL 398
Query: 62 IN 63
+
Sbjct: 399 VK 400
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A E M+ R +PD T ++ G C A + +RA E+ M KG K D ++ L
Sbjct: 26 DQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSL 85
Query: 62 INGGS 66
++G S
Sbjct: 86 VDGLS 90
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G PD +L+DG A D AR+LL + S+G K +++ I+G
Sbjct: 70 MNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISG 123
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + E M+Q+G PDT T ++ FC + A +++ M + G + + ++ L
Sbjct: 198 DEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHIYNSL 257
Query: 62 ING 64
++G
Sbjct: 258 MDG 260
>gi|255686002|gb|ACU28490.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 133
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 42 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 101
Query: 61 LING 64
L+NG
Sbjct: 102 LLNG 105
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 77 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 133
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+
Sbjct: 10 AAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 69
Query: 64 GGSARIR 70
G S +++
Sbjct: 70 GYSTQLK 76
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ +G PD+ N L+D A R D A M GC Q ++++I
Sbjct: 434 VDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTDDACAFYKRMEDDGCDQTVYTYTI 493
Query: 61 LING 64
LI+G
Sbjct: 494 LIDG 497
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + MI +G+ P + AL +G CL+ +F RA +L + G + +H +
Sbjct: 505 EEALKFWDSMIDKGITPTAAAFRALSNGLCLSGKFSRAWRILDELAPMGVIPET-AHEDM 563
Query: 62 IN 63
IN
Sbjct: 564 IN 565
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA +++GV + +L+DGF D+A+EL M +KG D++ +++
Sbjct: 399 LEEALACFRSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNV 458
Query: 61 LING 64
LI+
Sbjct: 459 LIDA 462
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L M+ RG+NPD + N L+ G+C + ++ LL M G D+F+ +LI
Sbjct: 340 EAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLI 399
Query: 63 NG 64
G
Sbjct: 400 QG 401
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L +M +R V PD + ALM+G C R A +LL M +G D S++
Sbjct: 303 LSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNT 362
Query: 61 LING 64
LI G
Sbjct: 363 LICG 366
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ N E M + G PD T N L++G+C R A L M + D S++
Sbjct: 268 IDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTA 327
Query: 61 LING--GSARIRK 71
L+NG R+R+
Sbjct: 328 LMNGLCKEGRVRE 340
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ G+ PD C A++ G+C +A LLV + D+ S+S L+
Sbjct: 515 EAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLV 574
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A ++M+ RG PD T N L+ C + D A E+L + SKGC +++
Sbjct: 238 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 297
Query: 61 LINGGS 66
+I+G S
Sbjct: 298 VIDGLS 303
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N L++G C R D A + L +M S GC+ + +H+I++
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 159
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P+ T N++M G C + + DRA + L M SK CK +++ILI G
Sbjct: 357 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 406
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M G P++ + N L+ GFC + DRA E L M S+GC D +++ L+
Sbjct: 209 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 266
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA M G P+ T N ++ C R+ A +LL M KGC + +I
Sbjct: 133 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 192
Query: 61 LIN 63
LIN
Sbjct: 193 LIN 195
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + +G +P T N ++DG + +RA +LL M KG K D ++S
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 332
Query: 61 LINGGS 66
L++G S
Sbjct: 333 LVSGLS 338
>gi|255685992|gb|ACU28485.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
Length = 121
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 30 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKIENALEILDVMLDNGVDPDVYTYNS 89
Query: 61 LING 64
L+NG
Sbjct: 90 LLNG 93
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++ A + ++M+ GV+PD T N+L++G C +++ E +M KGC + F+
Sbjct: 65 IENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 121
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI+G S
Sbjct: 1 LASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 60
Query: 67 ARIR 70
+++
Sbjct: 61 TQLK 64
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ PD TCN LM+G CL + ++A +L S KG K D +++ LI
Sbjct: 587 MLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQA 640
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G ++M + G+ PD T N L+D +C A +A L+ M G K D F+ +
Sbjct: 402 LEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNT 461
Query: 61 LI 62
L+
Sbjct: 462 LL 463
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + + ++PD N +DG C A + AR+L ++ SKG + D +++SI+I
Sbjct: 362 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 421
Query: 63 NG 64
NG
Sbjct: 422 NG 423
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ EA+ + + MIQRG P+ + N L++G+C R D+A L M + D ++S
Sbjct: 254 VTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 313
Query: 60 ILING 64
LI+G
Sbjct: 314 TLIHG 318
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI G PD T L++G C A LL SM K C+ + F+++ +I
Sbjct: 116 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 175
Query: 63 NG 64
+
Sbjct: 176 DS 177
>gi|449446161|ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A + MI +G P+ T N+++ GFC+ +F A +L M S+GC+ + +S L
Sbjct: 378 EKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTL 437
Query: 62 IN 63
++
Sbjct: 438 VS 439
>gi|449440630|ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
gi|449524136|ref|XP_004169079.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
Length = 632
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + + M G PD T + L+ G C A R + AR++L M ++GC D + +IL
Sbjct: 382 DDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTIL 441
Query: 62 ING 64
I G
Sbjct: 442 IQG 444
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M +G PD T L+ G C A+ D A M K C DA +
Sbjct: 416 LEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDV 475
Query: 61 LING 64
LI+G
Sbjct: 476 LISG 479
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E MI +G PD+ N L+D A R D A M GC Q ++++I
Sbjct: 437 VDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDIACAFYERMEDDGCDQTVYTYTI 496
Query: 61 LING 64
LI+G
Sbjct: 497 LIDG 500
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA +++GV + +L+DGF D+A+EL M +KG D++ +++
Sbjct: 402 MEEALSCFRSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNV 461
Query: 61 LING 64
LI+
Sbjct: 462 LIDA 465
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + MI +G+ P + L +G CL+ +F RA +L + G + +H +
Sbjct: 508 EEALKFWDSMIDKGITPTAAAFRVLANGLCLSGKFSRAWRILDELAPMGVIPET-AHEDM 566
Query: 62 IN 63
IN
Sbjct: 567 IN 568
>gi|449485620|ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A + MI +G P+ T N+++ GFC+ +F A +L M S+GC+ + +S L
Sbjct: 378 EKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTL 437
Query: 62 IN 63
++
Sbjct: 438 VS 439
>gi|18390636|ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06270
gi|8844132|gb|AAF80224.1|AC025290_13 Contains similarity to an unknown protein F23N19.4 gi|6630464 from
Arabidopsis thaliana gb|AC007190 and contains multiple
PPR PF|01535 repeats. EST gb|T44174 comes from this gene
[Arabidopsis thaliana]
gi|17529194|gb|AAL38823.1| unknown protein [Arabidopsis thaliana]
gi|20465473|gb|AAM20196.1| unknown protein [Arabidopsis thaliana]
gi|21536601|gb|AAM60933.1| unknown [Arabidopsis thaliana]
gi|332189849|gb|AEE27970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 343
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ M + GC D S+ +IN
Sbjct: 166 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVIN 214
>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 375
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G P ST + LM G CL + D A L + +KG K D H+ILI
Sbjct: 216 EAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILI 275
Query: 63 NG 64
+G
Sbjct: 276 HG 277
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M++ G P+T NAL++GF A +F+ A + MG+ C + +++
Sbjct: 145 LDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFREMGTH-CSPNIVTYNT 203
Query: 61 LING 64
LING
Sbjct: 204 LING 207
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ + ELMI+ G D+ T L+DG C +++ +L KG DAFS+S
Sbjct: 75 VDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P+ T N L++G C +RF A +L+ M KG K ++S+L+ G
Sbjct: 195 SPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKG 242
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M+ G PD T +++GFC D A LL SM S GCK + S++I
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 61 LING 64
++ G
Sbjct: 432 VLKG 435
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M Q+ D T N L+D FC DR ELL M S GC D +++ +I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Query: 63 NG 64
NG
Sbjct: 399 NG 400
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G P+ T N L++ C ++A ELL M GC D S+S +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503
Query: 63 NG 64
+G
Sbjct: 504 DG 505
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ AN + M G+ P+ N ++ G C A+R+ A ELL M K C D + +I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 61 LIN 63
L++
Sbjct: 362 LVD 364
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A R+ A EL+ M +GC + + +
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 61 LIN 63
LIN
Sbjct: 467 LIN 469
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M++ P+ T N L+ C F+R E+L M GC D ++ +I+G
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M+ G PD T +++GFC D A LL SM S GCK + S++I
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 61 LING 64
++ G
Sbjct: 432 VLKG 435
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M Q+ D T N L+D FC DR ELL M S GC D +++ +I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Query: 63 NG 64
NG
Sbjct: 399 NG 400
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G P+ T N L++ C ++A ELL M GC D S+S +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503
Query: 63 NG 64
+G
Sbjct: 504 DG 505
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ AN + M G+ P+ N ++ G C A+R+ A ELL M K C D + +I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 61 LIN 63
L++
Sbjct: 362 LVD 364
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A R+ A EL+ M +GC + + +
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 61 LIN 63
LIN
Sbjct: 467 LIN 469
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M++ P+ T N L+ C F+R E+L M GC D ++ +I+G
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++A + + M +G P+ T N +++G C R D AR+LL + S GC+ D S++
Sbjct: 193 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTT 252
Query: 61 LINGGSARIR 70
L+ G A R
Sbjct: 253 LLKGLCASKR 262
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M++RG P+ T L++ C F++A +L M +KGC + +++++I
Sbjct: 160 DALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVII 219
Query: 63 NG 64
NG
Sbjct: 220 NG 221
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + G PDT + L+ G C + R+D EL M K C + + +
Sbjct: 228 VDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 287
Query: 61 LI 62
LI
Sbjct: 288 LI 289
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M+ R P+ T N L++ FC D A EL+ M GC + +++
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529
Query: 61 LING 64
L +G
Sbjct: 530 LFDG 533
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M + G T NAL++GFC+ D A EL SM CK + +++
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTT 459
Query: 61 LING 64
L+ G
Sbjct: 460 LLTG 463
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + M + +T+ CN +++ C R D A + L +MGS GC D S++
Sbjct: 298 VERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTT 357
Query: 61 LING 64
++ G
Sbjct: 358 VLKG 361
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
EL P+T T L+ G C A+R D A EL+ M + C + + ++L+N
Sbjct: 443 ELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVN 497
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M++ G P+ T N L DG + A ELL + SKG D + S
Sbjct: 505 LDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 564
Query: 61 LI 62
+I
Sbjct: 565 II 566
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A M G NPDT + ++ G C A+R++ A+ELL M C + + +
Sbjct: 333 VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392
Query: 61 LI 62
I
Sbjct: 393 FI 394
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E + + M + G PDT T NA+++G C + + A ++ M KGCK D FS + +
Sbjct: 343 EEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTI 402
Query: 62 I 62
I
Sbjct: 403 I 403
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + + M+++G PD + N ++ C + D+A +LL M +GC D S+ I
Sbjct: 377 LESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRI 436
Query: 61 LING 64
+ +G
Sbjct: 437 IFDG 440
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+AN L + M+ P++ST NAL+DG C + A L+ SM KG K +++I
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359
Query: 61 LI 62
LI
Sbjct: 360 LI 361
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + + M+++G+ P T NAL+DG+C + A+E+L M S C + +++
Sbjct: 125 LEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNE 184
Query: 61 LING 64
LI G
Sbjct: 185 LICG 188
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EAN L + ++G+ + AL+DG+C A + D A LL M ++ C ++ +++
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324
Query: 61 LING 64
LI+G
Sbjct: 325 LIDG 328
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L LM + GV PD T + +D C R + A L S+ KG K + ++
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289
Query: 61 LING 64
LI+G
Sbjct: 290 LIDG 293
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ + + M+ G PD A + FC A +++ M +G DA +++++
Sbjct: 371 DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLV 430
Query: 62 ING 64
I+
Sbjct: 431 IDA 433
>gi|242035667|ref|XP_002465228.1| hypothetical protein SORBIDRAFT_01g034600 [Sorghum bicolor]
gi|241919082|gb|EER92226.1| hypothetical protein SORBIDRAFT_01g034600 [Sorghum bicolor]
Length = 557
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M+ +G T +CN L+ GFC+ R A E+ M KG K D ++
Sbjct: 334 LEKARKVYDEMLAKGFKQTTVSCNILIKGFCVHGRVYDALEVFEEMSVKGIKHDVITYDT 393
Query: 61 LING 64
LI G
Sbjct: 394 LIRG 397
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A + + M+ RG+ P+ +L+ +C ++AR++ M +KG KQ S +ILI
Sbjct: 301 DAQQMWDEMVDRGIQPNEYAYCSLVSYYCRVGDLEKARKVYDEMLAKGFKQTTVSCNILI 360
Query: 63 NG 64
G
Sbjct: 361 KG 362
>gi|326498263|dbj|BAJ98559.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + E M G PD T + L+ G C A + D AR++L M ++GC D + ++L
Sbjct: 351 DEAAEIVERMRTAGHQPDNITYSQLIFGLCKAAKCDEARQVLDEMEAEGCTPDLKTWTML 410
Query: 62 INGGSA 67
I G A
Sbjct: 411 IQGHCA 416
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M G PD T L+ G C A D+A + L M K + DA ++
Sbjct: 386 DEARQVLDEMEAEGCTPDLKTWTMLIQGHCAAGEVDKALQYLTEMIEKDLEADADLLDVM 445
Query: 62 ING 64
+ G
Sbjct: 446 VKG 448
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + ELM Q G D++T L+DGFC +++ +L KG DAF++S
Sbjct: 75 VDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + MI+ G P+ N L++GF +FD A + MGS C +++
Sbjct: 145 LDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 17 NPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+P T N L++G C +RF A +L+ M KG K ++S+L+ G
Sbjct: 196 SPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKG 243
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G P T + LM G C + + A +L + S G K D +ILI
Sbjct: 217 EAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
>gi|296088922|emb|CBI38482.3| unnamed protein product [Vitis vinifera]
Length = 368
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L E M+ +G+NP+ +CN L++G C A E L M +G D +++
Sbjct: 226 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 285
Query: 61 LING 64
LING
Sbjct: 286 LING 289
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
MI RG+ PD T N+L++G C R A L + +G DA +++ LI+
Sbjct: 271 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 323
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+++G+ PDT T ++L+ GFC R A +L M G D F+++
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 61 LING 64
LIN
Sbjct: 526 LINA 529
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++ G+ PD T AL++ +C+ ++A +L M KG D ++S+LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 63 NGGSARIR 70
NG + + R
Sbjct: 563 NGLNKQSR 570
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M +G P+ T N L+DG+C + D +LL SM KG + + S+++
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 61 LING 64
+ING
Sbjct: 281 VING 284
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M++ V+P+ T N L+ GFC A D A L M +KGC + +++ LI+ G ++R
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID-GYCKLR 254
Query: 71 K 71
K
Sbjct: 255 K 255
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + E M ++G++PD + + ++ GFC + D A + M KG K D ++S
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 61 LING 64
LI G
Sbjct: 491 LIQG 494
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + M G +P T NAL++G C+ + + A +L M KG D S+S
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 61 LING 64
+++G
Sbjct: 456 VLSG 459
>gi|399216092|emb|CCF72780.1| unnamed protein product [Babesia microti strain RI]
Length = 1520
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L E M+ + PD T + ++ G+C+ DR+ +LL +M +G K D ++
Sbjct: 1065 MNKAANLLEDMLNNNIEPDLITFSTVIKGYCVQSNMDRSLQLLRAMSERGIKPDGILYNS 1124
Query: 61 LING 64
L++G
Sbjct: 1125 LLDG 1128
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M +G PD T N L+ GFC R D A L + S GC+ D SH++++
Sbjct: 234 QAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMIL 293
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A E+M+ RG PD T N L+ C + D A +L + SKGC S++
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 431
Query: 61 LING 64
+I+G
Sbjct: 432 VIDG 435
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E+M + G P++ + N L+ GFC DRA E L M S+GC D +++I
Sbjct: 337 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNI 396
Query: 61 LING 64
L+
Sbjct: 397 LLTA 400
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+Q PD TC L+D C +A +L M +KGCK D ++++LI G
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKG 260
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + E M +G +PD C AL+ FC R A +++ + G D S+++
Sbjct: 95 LEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNV 154
Query: 61 LING 64
LI+G
Sbjct: 155 LISG 158
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + G PD + N ++ C R+ A +LL +M KGC + +I
Sbjct: 267 LDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNI 326
Query: 61 LIN 63
LIN
Sbjct: 327 LIN 329
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + M Q G P+T+ CN +++ C R D A + L +MG GC D S++
Sbjct: 308 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 367
Query: 61 LING 64
++ G
Sbjct: 368 VLRG 371
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+QRG P T L++ C + F A +L M +KGC + +++++ING
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIING 231
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M +G P+ T N +++G C R D A+E+L + S G + D S++ ++
Sbjct: 205 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 264
Query: 63 NGGSARIR 70
G A R
Sbjct: 265 KGLCAARR 272
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
EL P+T T L+ G C A+R D A ELL M K C +A + ++L++
Sbjct: 453 ELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVS 507
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A M G NPDT + ++ G C A R++ A+ELL M K C + + +
Sbjct: 343 VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNT 402
Query: 61 LI 62
I
Sbjct: 403 FI 404
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L ELM + G + T NAL+ GFC+ R D A EL ++ C+ + +++
Sbjct: 413 IEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTT 469
Query: 61 LING 64
L+ G
Sbjct: 470 LLTG 473
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M++ G P+ T N L+DG + A ELL + SKG D ++S
Sbjct: 515 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 574
Query: 61 LIN 63
+++
Sbjct: 575 VVD 577
>gi|297819444|ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323443|gb|EFH53864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M G PD T + L+ G C A R + AR +L M ++GC D + +IL
Sbjct: 384 DEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTIL 443
Query: 62 ING 64
I G
Sbjct: 444 IQG 446
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ + M +G PD T L+ G C + DRA +M KG D+ +
Sbjct: 418 LEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDRALACFANMLEKGFDIDSNLLDV 477
Query: 61 LING 64
LI+G
Sbjct: 478 LIDG 481
>gi|15228363|ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g48250, chloroplastic; Flags: Precursor
gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis thaliana]
gi|332644870|gb|AEE78391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M G PD T + L+ G C A R + AR +L M ++GC D + +IL
Sbjct: 387 DEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTIL 446
Query: 62 ING 64
I G
Sbjct: 447 IQG 449
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ + M +G PD T L+ G C + D+A +M KG D+ +
Sbjct: 421 LEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDV 480
Query: 61 LING 64
LI+G
Sbjct: 481 LIDG 484
>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
Length = 540
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + M+ GV PD +C +L+ +ADR D A +LL M G DA +++ L
Sbjct: 437 DEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNAL 496
Query: 62 IN 63
+
Sbjct: 497 VK 498
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A E M+ R +PD T ++ G C A + +RA E+ M KG K D ++ L
Sbjct: 124 DQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSL 183
Query: 62 INGGS 66
++G S
Sbjct: 184 VDGLS 188
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 19 DTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
D ++ N ++ G CLA RF RA ELL M + G K+ +H I++
Sbjct: 3 DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKA 48
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G PD +L+DG A D AR+LL + S+G K +++ I+G
Sbjct: 168 MNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISG 221
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+++GV D L+ G R D A+E+ +M +GC D ++ +
Sbjct: 260 IEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGM 319
Query: 61 LIN 63
+++
Sbjct: 320 IVS 322
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL + +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA A ++Q G++PDT T +L+ G C D A E+ + M KGC+++ S++ LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 63 NG 64
+G
Sbjct: 272 HG 273
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + M ++G+ P T NAL+DG+C D A E+L M S C + +++
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 61 LING 64
LI G
Sbjct: 410 LICG 413
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M ++G P+ T L+DG C ++ D AR++L M KG +++ LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 63 NG 64
+G
Sbjct: 377 DG 378
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + + +GV + AL+DG+C + D A LL M + C +++++++
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 61 LING 64
LI G
Sbjct: 550 LIEG 553
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M+ P++ T N L++G C + A L+ M + G K +++I
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Query: 61 LI 62
LI
Sbjct: 585 LI 586
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L LM + G+ PD T + +D C R + A L S+ +KG K + ++
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514
Query: 61 LING 64
LI+G
Sbjct: 515 LIDG 518
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A + ++ G N D L+DG D D EL+ M KGC+ + ++S+L
Sbjct: 824 EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLL 883
Query: 62 ING 64
I G
Sbjct: 884 IEG 886
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M++R ++P T N+L+ G C + + A LL M G D +++S+ I
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481
Query: 63 N 63
+
Sbjct: 482 D 482
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + + M + G+ PD T L+DG+ RA + L M GCK + SI
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 61 LINGGSARIR 70
LI S R
Sbjct: 690 LIKNLSHENR 699
>gi|413948245|gb|AFW80894.1| hypothetical protein ZEAMMB73_865420 [Zea mays]
Length = 573
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L ++M R V PD + LMDG C A R AR + M G + DA ++S+
Sbjct: 259 LQDALHLFDVMPHRRVPPDLVSHTILMDGLCKAWRLKDARRMFDRMVHGGLRPDAVAYSV 318
Query: 61 LING 64
LI G
Sbjct: 319 LITG 322
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A G E + ++G PD T N L+ G+C R A L M + D SH+IL
Sbjct: 225 ERAYGFLEELEEQGFEPDVVTYNTLLAGYCRKGRLQDALHLFDVMPHRRVPPDLVSHTIL 284
Query: 62 ING 64
++G
Sbjct: 285 MDG 287
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M+ G+ PD + L+ G+C + AR LL+ M G AF+ +
Sbjct: 294 LKDARRMFDRMVHGGLRPDAVAYSVLITGYCNEGQLKEARSLLMEMAGSGLLDIAFALRV 353
Query: 61 LING 64
++ G
Sbjct: 354 VVQG 357
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M++ G PD T +++GFC D A LL +M + GCK + S++I
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403
Query: 61 LING 64
++ G
Sbjct: 404 VLKG 407
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L M Q D T N L+D FC DR ELL M GC D +++ +
Sbjct: 310 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 369
Query: 62 ING 64
ING
Sbjct: 370 ING 372
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G P+ T N L++ C ++A ELL M GC D S+S +I
Sbjct: 416 DAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVI 475
Query: 63 NG 64
+G
Sbjct: 476 DG 477
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
AN + M G+ P+ N ++ G C A+R++ A +LL M + C D + +IL++
Sbjct: 277 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 336
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLV----------SMGSKG 50
+DE L + G PD + NA++ G C+A R+D EL+V M G
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHG 253
Query: 51 CKQDAFSHSILING 64
C D ++ +I+G
Sbjct: 254 CTPDLRMYATIIDG 267
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A+R+ A+EL+ M +GC + + +
Sbjct: 379 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 438
Query: 61 LIN 63
LIN
Sbjct: 439 LIN 441
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M++ G PD T +++GFC D A LL +M + GCK + S++I
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428
Query: 61 LING 64
++ G
Sbjct: 429 VLKG 432
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + G PD + NA++ G C+A R+D EL+V M GC + + +
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNT 253
Query: 61 LI 62
LI
Sbjct: 254 LI 255
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G P+ T N L++ C ++A ELL M GC D S+S +I
Sbjct: 441 DAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 500
Query: 63 NG 64
+G
Sbjct: 501 DG 502
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L M Q D T N L+D FC DR ELL M GC D +++ +
Sbjct: 335 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 394
Query: 62 ING 64
ING
Sbjct: 395 ING 397
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
AN + M G+ P+ N ++ G C A+R++ A +LL M + C D + +IL++
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A+R+ A+EL+ M +GC + + +
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463
Query: 61 LIN 63
LIN
Sbjct: 464 LIN 466
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ L M++ G P+ +T N L+ C F++ E L M GC D ++ +
Sbjct: 230 DDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATI 289
Query: 62 ING 64
I+G
Sbjct: 290 IDG 292
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + ELM RG P+ T NAL+ GFC + +A LL M + G DA ++++
Sbjct: 162 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 221
Query: 61 LING 64
LI G
Sbjct: 222 LIRG 225
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T N+L+ G+C ++ D AR+L M +G QD S++ LI G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEG 54
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L + + RG+ P+ T N+L++G C + + D A + L M S GC D +++S
Sbjct: 268 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 327
Query: 62 I 62
I
Sbjct: 328 I 328
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M ++G+ P TC A+++ +C R A +L M +GCK + ++++ L+
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 188
Query: 63 NG 64
G
Sbjct: 189 QG 190
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSA 67
M+ G NPD T M +C+ R + A +L+ M G D +++ L++G ++
Sbjct: 382 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 438
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L LM G+ D T NAL++ C R D+A L S+ ++G K +A + +
Sbjct: 232 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 291
Query: 61 LING 64
LING
Sbjct: 292 LING 295
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GVNPD T N L+ G C+ + A LL M G D ++++ LIN
Sbjct: 211 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 260
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG P T L++ C + F +A E+L M +KGC + +++++I
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Query: 63 NG 64
NG
Sbjct: 223 NG 224
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M + G + T NAL++GFC+ R D A EL SM CK + +++
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTT 462
Query: 61 LING 64
L+ G
Sbjct: 463 LLTG 466
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E M G +T+ CN +++ C R D A + L +MGS GC D S++
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 61 LING 64
++ G
Sbjct: 361 VLKG 364
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
EL P+T T L+ G C A+R D A ELL M K C + + ++L++
Sbjct: 446 ELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 500
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M +G P+ T N +++G C R D ARE L + S G + D S++ ++ G A R
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M++ G P+ T N L+DG + A ELL + S G D ++S
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 567
Query: 61 LI 62
+I
Sbjct: 568 II 569
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M+Q+ P+ T N L+ FC D A EL+ M GC + +++
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 61 LING 64
L++G
Sbjct: 533 LLDG 536
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A M G +PDT + ++ G C A+R++ A+ELL M K C + + +
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 61 LI 62
I
Sbjct: 396 FI 397
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + G PDT + ++ G C A R++ EL M K C + + +
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 61 LI 62
L+
Sbjct: 291 LV 292
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + +LM++ V D T N L+DG+CL + D A +LL M G K + +++ +IN
Sbjct: 502 AKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMIN 561
Query: 64 G 64
G
Sbjct: 562 G 562
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M+ GV P+ T N +++G+C R + A L M SKG ++S
Sbjct: 534 VDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYST 593
Query: 61 LING 64
++ G
Sbjct: 594 ILQG 597
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M ++G+NPDT T +MD C+ + D A + S+G DA
Sbjct: 394 VDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRN 453
Query: 61 LINGGSAR 68
LI+G AR
Sbjct: 454 LIHGLCAR 461
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M+ +G++PD T N+++ A D+A +LV M G + +H+
Sbjct: 219 LDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNS 278
Query: 61 LING 64
L++G
Sbjct: 279 LLHG 282
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSIL 61
+I G+ PD L+ G C D++D+A EL V M +G C + F +++L
Sbjct: 439 LISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLL 490
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M +GVNP T + ++ G A R A+EL + M G K D +++I
Sbjct: 569 IEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNI 628
Query: 61 LING 64
++ G
Sbjct: 629 ILLG 632
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ G P+ T N+L+ G+C + + + A + M G + D F+++
Sbjct: 254 MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNT 313
Query: 61 LI-----NGGSARIRK 71
L+ NG S RK
Sbjct: 314 LMGYLCKNGRSMEARK 329
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L +LM G P T N +MDG C D ARELL S+ S GC + +++ ++
Sbjct: 205 QAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVL 264
Query: 63 NG 64
G
Sbjct: 265 KG 266
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + G++P N ++ G C + D+A ++L +M S GC D ++SILI
Sbjct: 484 EAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILI 543
Query: 63 NG 64
G
Sbjct: 544 QG 545
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M + + T NA++ G C D A LL +M + GCK + F+++IL+ G
Sbjct: 314 LLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKG 371
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG PD T N L++ C + +A EL+ M +GC +++++++G
Sbjct: 178 MLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDG 231
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
G P+ T N L+ G C A+R++ A +L+ M C D + + +I
Sbjct: 357 GCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTII 404
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L I RG P T +++G+C A+R D A + SM S CK D ++ +L
Sbjct: 281 DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVL 340
Query: 62 IN 63
IN
Sbjct: 341 IN 342
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + E M RGV P T NA++DG+C + R A + M GC D ++++ILI
Sbjct: 214 ARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIY 273
Query: 64 G 64
G
Sbjct: 274 G 274
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++++GV T +L+DGF A D A L+ M ++GCK D++++S+L+
Sbjct: 496 FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQA 550
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A G+ LM + G NPD T N L+ G C ++ D A ELL +G + +
Sbjct: 246 MKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTN 304
Query: 61 LING 64
+ING
Sbjct: 305 IING 308
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M G+ P+ +++DG+C + A E+ M +GC+ +A+++S LI
Sbjct: 352 EAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLI 411
Query: 63 NG 64
G
Sbjct: 412 YG 413
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + MI G P +T + +C + + A L+ M G D ++++
Sbjct: 593 DHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVF 652
Query: 62 ING 64
ING
Sbjct: 653 ING 655
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M++ G+NP T ++++ GFC A R + A L M K + +++
Sbjct: 713 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTM 772
Query: 61 LI 62
LI
Sbjct: 773 LI 774
>gi|410109907|gb|AFV61033.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
trifolia]
Length = 250
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M+ GV PD T + L++GFC + D A EL M KG + + +
Sbjct: 173 LDEGFRLKSAMLASGVQPDVYTYSVLINGFCKESKMDDANELFDEMLVKGLVPNGVTFTT 232
Query: 61 LING 64
LI+G
Sbjct: 233 LIDG 236
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + + + G+ P + N LM+G+ D L +M + G + D +++S+LIN
Sbjct: 141 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 200
Query: 64 G 64
G
Sbjct: 201 G 201
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRAREL 42
MD+AN L + M+ +G+ P+ T L+DG C R D A E+
Sbjct: 208 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 249
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A ELM+ G PD + N L+ C D A ELL + KGC S++
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402
Query: 61 LING 64
+I+G
Sbjct: 403 VIDG 406
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N +++G C R D A E L S+ S GC+ + S++I++
Sbjct: 205 QAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVL 264
Query: 63 NG 64
G
Sbjct: 265 KG 266
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M++RG PD T L++ C + +A +LL M KGC D +++++
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228
Query: 62 ING 64
+NG
Sbjct: 229 VNG 231
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
+ PDT T N L+ G C R D A +L M +GC D +++IL+ R
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKR 200
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + G P+T + N ++ G C A+R++ A +L+ M KG + + ++
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 61 LIN 63
LI+
Sbjct: 298 LIS 300
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
PD + NA++ G+C+ + D AR L+ +M + D ++++ LI G R R
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGR 167
>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 946
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A L + + RG PD T ++ +C + A +L M S+G K D ++++
Sbjct: 601 MQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTV 660
Query: 61 LINGGSARIR 70
L++G S + R
Sbjct: 661 LLDGKSKQAR 670
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + + M ++G PD N L G C A +LL M S+G K ++ +H I+
Sbjct: 457 DKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKII 516
Query: 62 ING 64
I G
Sbjct: 517 IEG 519
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDE G+ E + ++ D + G+CL + D+A + M KG K D ++++
Sbjct: 421 MDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNV 480
Query: 61 LING 64
L G
Sbjct: 481 LAAG 484
>gi|302791469|ref|XP_002977501.1| hypothetical protein SELMODRAFT_50901 [Selaginella
moellendorffii]
gi|300154871|gb|EFJ21505.1| hypothetical protein SELMODRAFT_50901 [Selaginella
moellendorffii]
Length = 233
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P+ T N+L+ GFC+A+R D L+ M + GC D +++ LI+G
Sbjct: 1 GIEPNVVTYNSLIHGFCMANRVDSTLLLMEEMTATGCLPDIITYNTLIDG 50
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ V PD T + L++G+C A D A+ LL M + C D ++++ L++G
Sbjct: 71 KQAVLPDIVTFSTLVEGYCNAGLVDDAKRLLEEMVASDCSPDVYTYTSLVDG 122
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M+ +PD T +L+DGFC R R +L M +GC+ + +++
Sbjct: 94 VDDAKRLLEEMVASDCSPDVYTYTSLVDGFCKVRRLVEVRRVLKRMAKRGCQPNVVTYTA 153
Query: 61 LING 64
LI+
Sbjct: 154 LIDA 157
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EAN + + M G+NP+ T N L+DGFC + +A L + S+G +++IL
Sbjct: 320 NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 62 ING 64
++G
Sbjct: 380 VSG 382
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + M +RG+ P T L+D F D ++A +L M G D ++S+LI+
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIH 451
Query: 64 G 64
G
Sbjct: 452 G 452
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G +P+ L+DG C ++A++L MG G + +++++LI+G
Sbjct: 193 GFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M++ V P+ T N L++G CL D+ A L+ M GC+ D F++
Sbjct: 167 VSEAVVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGP 226
Query: 61 LIN 63
++N
Sbjct: 227 ILN 229
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L M + G+ D T N+L+ GFC A R+D +LL M ++ + + S L
Sbjct: 273 DEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSAL 332
Query: 62 IN 63
I+
Sbjct: 333 ID 334
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++M+ +GV PD T NAL++G C AR L+ M + G K D + + LI+G
Sbjct: 377 QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDG 432
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + L + M RG+ P+ T L+DG C + D A + M ++G + D +++
Sbjct: 334 LDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNA 393
Query: 61 LING 64
LING
Sbjct: 394 LING 397
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E L +M GV PD T +AL++G C R D L M +G + + +
Sbjct: 299 VEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTT 358
Query: 61 LING 64
LI+G
Sbjct: 359 LIDG 362
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E+M+ +G+ PDT T N ++DG C A++L + M S G + D +++ LI+
Sbjct: 511 LREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHC 570
Query: 67 AR 68
R
Sbjct: 571 ER 572
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
G+ P T N L+DG+C + AR L M +GC D +++IL+N GS ++R
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMN-GSHKVR 468
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M+++G PD T LM+G ARE M SKG + D F+++
Sbjct: 435 LEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT 494
Query: 61 LI 62
I
Sbjct: 495 RI 496
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDE L E MI G PD ST L++G C A + D A L MG+KG D +++
Sbjct: 261 MDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNC 320
Query: 61 LI 62
+
Sbjct: 321 FL 322
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E MI+ G P T N L+ F D A E M +GC QD ++ ++
Sbjct: 332 EEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIVM 391
Query: 62 ING 64
I+G
Sbjct: 392 IDG 394
>gi|356569756|ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15280-like [Glycine max]
Length = 1186
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+D A + + MI+RG+ PD ST L+ G+C + RFD + L+ M ++G
Sbjct: 363 LDHARDIVDEMIERGILPDISTFRVLIAGYCKSRRFDEVKSLIHEMENRG 412
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L E M+ RGVNPDT N L+ G C+ +A EL M +G K + +++
Sbjct: 825 LKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNS 884
Query: 61 LING 64
LI+G
Sbjct: 885 LIHG 888
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EAN L M++ V P+ T N L++G C RA ELL M KG D +++
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRP 570
Query: 61 LING 64
LI+G
Sbjct: 571 LISG 574
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +G+ P+ T + L+D FC + D A L M G K + +S
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 61 LING 64
LI+G
Sbjct: 431 LISG 434
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L M +G++P+T T AL+ G C A+R A +L M + ++++LI G
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ G+ PD A++ C F RARE++ M S GC ++++ I G
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRG 259
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+++G+ PDT T L+ G C R ARE + + + K + S L++G
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHG 609
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
GV P NAL++ C + D A L +MG KG + ++SILI+ R
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKR 403
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M G+ P+T N L+ FC R A E+ M KGCK D ++ +
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 61 LING 64
LI+G
Sbjct: 500 LISG 503
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MDEANG-LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+D+A L++++ G+ PD T N+L+ G+ A E+L M +KGCK + +S++
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 60 ILING 64
IL++G
Sbjct: 429 ILVDG 433
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M++ G P +CN L++G C + + A E M +G D + +
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 61 LING 64
LING
Sbjct: 640 LING 643
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M+ +G D T N+L+ G C A D+AR L M G S +I
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 61 LING 64
LING
Sbjct: 605 LING 608
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M ++G PD T N+L+ G C D A LL M S+G + +++ LI
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 63 NG 64
N
Sbjct: 537 NA 538
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M G PD T N ++ G C DR + A +++ M +G D ++
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 61 LING 64
L+NG
Sbjct: 328 LMNG 331
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + M+ RG PD T N+L++G C A R + + + ++G D + +
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 61 LIN 63
L++
Sbjct: 675 LMS 677
>gi|255660976|gb|ACU25657.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 376
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM+G CL + RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
G
Sbjct: 277 RG 278
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RGV PD T NA+++G C A A ++V M S G + D +++ LI+G
Sbjct: 247 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDG 300
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A+G+ M G+ PDT T L+DG+C + D A E+ +M ++G D +++
Sbjct: 272 LKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 331
Query: 61 LINGGS 66
LI+G S
Sbjct: 332 LISGLS 337
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M + GV PD T AL+ G C R + AR + M +G K +A +I
Sbjct: 167 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 226
Query: 61 LIN 63
LI+
Sbjct: 227 LID 229
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G+ PD +T ++D FC LL M +KG K ++++++NG
Sbjct: 352 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G+ E M RG+ P+ L+D C + EL M +G + DA +++
Sbjct: 202 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 261
Query: 61 LING 64
++NG
Sbjct: 262 IVNG 265
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M +G P T N +M+GFC + A LL +M + G D +++IL++G
Sbjct: 383 LLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 440
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +AN L I +G PD T N L+DG+C + D A +L SM S G D +++
Sbjct: 414 VSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNS 473
Query: 61 LING 64
++NG
Sbjct: 474 ILNG 477
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A G+ + M GV PD T N++++G C A + + E + KGC + +++I
Sbjct: 449 MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNI 508
Query: 61 LI 62
LI
Sbjct: 509 LI 510
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQR-GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA L M Q+ + +T N +++ F D A++L MG KGC D++++
Sbjct: 554 LDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYR 613
Query: 60 ILING 64
++I+G
Sbjct: 614 VMIDG 618
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M + G++PD T N +++G C A LL + +KG D F+ + LI+G R++
Sbjct: 389 MSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLK 448
>gi|414587959|tpg|DAA38530.1| TPA: hypothetical protein ZEAMMB73_367044 [Zea mays]
Length = 537
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M +G PD T N L+ C D + LL M +KG K + FS+++
Sbjct: 303 LDQATRLVQEMKSQGCKPDICTYNGLIKALCKEGNVDWSMALLEEMVTKGIKPNNFSYNM 362
Query: 61 LIN 63
LIN
Sbjct: 363 LIN 365
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 19 DTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+T C LM+G + R +L MGSKGC D ++SIL++G
Sbjct: 186 NTVICGCLMEG-----KLARVTKLYEMMGSKGCPSDVHTYSILMHG 226
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + + M+ +G + ++ N ++ C + D+A L+ M S+GCK D +++ L
Sbjct: 269 DDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNGL 328
Query: 62 ING 64
I
Sbjct: 329 IKA 331
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + M +RG+ P+ TCN+ + C R A E SM +KG K D FS+
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410
Query: 61 LING 64
L++G
Sbjct: 411 LLHG 414
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M ++GV PD T N ++D C A D+A +L M + G + D ++S +I
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMI 342
Query: 63 NG 64
+G
Sbjct: 343 HG 344
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ + +L G P T N+L+DG+CL + D+A ++L +M G + D +++ L+
Sbjct: 564 DAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623
Query: 63 NG 64
+G
Sbjct: 624 DG 625
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M GV PD T N L+DG+ R + L M KG K + ++ I
Sbjct: 597 MDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656
Query: 61 LING 64
++ G
Sbjct: 657 MLAG 660
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC-KQDAFSHSILIN 63
M+ RG+ P+T+ ++++ GFC+ +A+EL+ M +KG + D S +IN
Sbjct: 501 MVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVIN 554
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L + M + GV ++ CNAL+ G R A L MG GC+ S++I
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 61 LING 64
LI G
Sbjct: 505 LICG 508
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ + M++ G PD T + L+ G C + D A EL G + D H+ILI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 63 NG 64
+G
Sbjct: 577 HG 578
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
GV P+ T N L+ C F++AR L M +G K D FS+S +IN
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L M ++G+ P+T+T L+DG C A F+RA +L+ M S+G + +++
Sbjct: 362 LNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNA 421
Query: 61 LINGGSARIR 70
++NG R R
Sbjct: 422 IVNGLCKRGR 431
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A L LM G +P+ T NA+++G C R A ++L G K D F+++IL
Sbjct: 398 ERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNIL 457
Query: 62 IN 63
++
Sbjct: 458 MS 459
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ G+ P+ +++G C +A E+L M KG K + ++H+ LI+G
Sbjct: 266 LVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 319
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L LM ++G +P+ T AL+DG A + D EL + M +KGC + ++ IL
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789
Query: 62 IN 63
IN
Sbjct: 790 IN 791
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M++ NP+ T A++DG C ++A LL M KGC + +++
Sbjct: 694 LDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTA 753
Query: 61 LING 64
LI+G
Sbjct: 754 LIDG 757
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M + GVNPD T L+D FC A ++A+ M S GC + +++
Sbjct: 468 VDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTA 527
Query: 61 LING 64
L++
Sbjct: 528 LLHA 531
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A + + M+++G PD ST ++ C A R D+A L M G D ++++IL
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTIL 493
Query: 62 IN 63
I+
Sbjct: 494 ID 495
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ L + M+ G P+ +AL+DGFC D A+E+ + M G +++
Sbjct: 624 VSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTS 683
Query: 61 LIN 63
LI+
Sbjct: 684 LID 686
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++P+ T AL++G C A + A +LL +M + GC+ + + L++G
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDG 652
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M + G +PD T N ++DG C D A ELL + S GCK D + +
Sbjct: 512 VDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNT 571
Query: 61 LING 64
L+ G
Sbjct: 572 LLKG 575
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M + G D T ++++DG C R D A ELL + S GCK D +++
Sbjct: 407 VDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 466
Query: 61 LING 64
++ G
Sbjct: 467 VLKG 470
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG +P T + L+D C + +A LL M +KGC+ D ++++LIN
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N L++ C D A +L ++ S GCK DA +++ ++
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363
Query: 63 NG--GSARIRK 71
GS R ++
Sbjct: 364 KSLCGSERWKE 374
Score = 38.1 bits (87), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + G PD T N L+ G C DR++ A +L+ +M C D + +
Sbjct: 547 IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNT 606
Query: 61 LIN 63
+I
Sbjct: 607 VIT 609
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD-AFSHS 59
M+EA L +M+ G+ PDT+T +L G C D DRA +L + G D F +
Sbjct: 685 MEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYND 744
Query: 60 ILI 62
+L+
Sbjct: 745 VLL 747
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + G PD T ++ C ++R+ ELL M S C D + +
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396
Query: 61 LIN 63
++
Sbjct: 397 IVT 399
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + G PDT ++ G C ++++RA EL+ M C D + +
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501
Query: 61 LI 62
++
Sbjct: 502 VV 503
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G++PDT+ N ++ GFC R D A + M S GC D ++ IL+
Sbjct: 734 GLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEA 783
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L M PD T N ++ C DRA E++ M GC D ++S ++
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSIL 433
Query: 63 NG 64
+G
Sbjct: 434 DG 435
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L M Q GV PD T N+L++G +R+ RA L+ M S+GC +A +++IL+
Sbjct: 245 AYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLK 304
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELL-VSMGSKGCKQDAFSHSI 60
DE L + ++ R + P+ T N +M C A R D+A L V + S +A ++
Sbjct: 313 DECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRA 372
Query: 61 LING 64
LI+G
Sbjct: 373 LIHG 376
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTS-TCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+D+A+ L +M+ P + T AL+ G CL +RA LL +M +GC D +
Sbjct: 347 LDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYG 406
Query: 60 ILI 62
++
Sbjct: 407 TIV 409
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M Q+G+ P+ + N+L+ GF ADRF A EL M G K + ++H + I
Sbjct: 353 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 412
Query: 63 N 63
N
Sbjct: 413 N 413
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M GV P+ + + A RFD A +L M ++GCK D +H++LI
Sbjct: 221 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 272
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L ++ +G +P T L+DG A R + A L M GCK + ++I
Sbjct: 841 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 900
Query: 61 LING 64
L+NG
Sbjct: 901 LLNG 904
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + GV P+ T N L+ C DR AR +L M KGC+ D SH+ +I+
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISA 206
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M E + + M+ RG+ PDT +++ FC A A +L M ++GC + + ++
Sbjct: 243 MREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTV 302
Query: 61 LING 64
L+ G
Sbjct: 303 LVKG 306
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A G+ M+ G P T + N L+ G C RA + MG C D ++S
Sbjct: 313 VHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYST 372
Query: 61 LINGGS 66
LI+G S
Sbjct: 373 LIDGFS 378
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M ++G PD + ++ C DR D AR +L M G +A H++ G R+R
Sbjct: 188 MARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALC---GQFRMR 244
Query: 71 K 71
+
Sbjct: 245 E 245
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L E M+Q+G P+T T N L D C D A ++L M GC D F+++
Sbjct: 591 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 650
Query: 61 LING 64
+I G
Sbjct: 651 IIFG 654
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L + M++ GV PD T + L+D C+ R D + G D ++++
Sbjct: 945 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLI 1004
Query: 62 ING 64
ING
Sbjct: 1005 ING 1007
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+LM R +P T L+DG + R A++L M GC+ + ++ILING
Sbjct: 882 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILING 937
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M G PD T L+D C A + D A+E+ M + K D ++
Sbjct: 276 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYIT 335
Query: 61 LIN 63
L++
Sbjct: 336 LLD 338
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G PD +T N L+D + + + D E+ M + C+ + +H+I+I+G
Sbjct: 817 GCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISG 866
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M Q+G+ P+ + N+L+ GF ADRF A EL M G K + ++H + I
Sbjct: 388 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 447
Query: 63 N 63
N
Sbjct: 448 N 448
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M GV P+ + + A RFD A +L M ++GCK D +H++LI
Sbjct: 256 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 307
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L ++ +G +P T L+DG A R + A L M GCK + ++I
Sbjct: 876 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 935
Query: 61 LING 64
L+NG
Sbjct: 936 LLNG 939
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RGV PD T NA+++G C A A ++V M S G + D +++ LI+G
Sbjct: 371 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDG 424
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A+G+ M G+ PDT T L+DG+C + D A E+ +M ++G D +++
Sbjct: 396 LKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 455
Query: 61 LINGGS 66
LI+G S
Sbjct: 456 LISGLS 461
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M + GV PD T AL+ G C R + AR + M +G K +A +I
Sbjct: 291 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 350
Query: 61 LING 64
LI+
Sbjct: 351 LIDA 354
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G+ PD +T ++D FC LL M +KG K ++++++NG
Sbjct: 476 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 529
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G+ E M RG+ P+ L+D C + EL M +G + DA +++
Sbjct: 326 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 385
Query: 61 LING 64
++NG
Sbjct: 386 IVNG 389
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G P T N +M+GFC + A LL +M + G D +++IL++G
Sbjct: 511 MQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 564
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L E M+Q+G P+T T N L D C D A ++L M GC D F+++
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 61 LING 64
+I G
Sbjct: 649 IIFG 652
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L + M++ GV PD T + L+D C+ R D + G D ++++
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 62 ING 64
ING
Sbjct: 1003 ING 1005
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+LM R +P T L+DG + R A++L M GC+ + ++ILING
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G PD +T N L+D + + + D EL M + C+ + +H+I+I+G
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M++ G PD N+L++ ADR D A ++ + M K +++
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 61 LING 64
L+ G
Sbjct: 579 LLAG 582
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ G P+ + N L++GF A D A L M +G + D ++S+L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 63 N 63
+
Sbjct: 969 D 969
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M++ G PD T +++GFC D A LL SM + GCK + S++I
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 479
Query: 61 LING 64
++ G
Sbjct: 480 VLKG 483
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + M G+ P+ N L+ G C A+R++ ELL M K C D + +I
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409
Query: 61 LIN 63
L++
Sbjct: 410 LVD 412
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C A+R+ A +L+ M +GC + + +
Sbjct: 455 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 514
Query: 61 LIN 63
LIN
Sbjct: 515 LIN 517
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E L M + D T N L+D FC DR ELL M GC D +++ +
Sbjct: 386 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 445
Query: 62 ING 64
ING
Sbjct: 446 ING 448
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G + T N L++ C ++A ELL M GC D S+S +I
Sbjct: 492 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 551
Query: 63 NG 64
+G
Sbjct: 552 DG 553
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M++ P+ T N L+ C F+R E+L M GC D ++ +I+G
Sbjct: 286 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 343
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + G PD + NA++ G C+A R+ +EL+ M C + + +
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304
Query: 61 LIN 63
LI+
Sbjct: 305 LIS 307
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG D CN +++ C D A LL + S GC+ D S++ ++ G
Sbjct: 223 RGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 273
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD ++DG C + A E+L M S G K + ++ L+ G
Sbjct: 325 MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 378
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G P+T +AL+DG C + D A+E L+ M +KG ++F++S L+ G
Sbjct: 201 MVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWG 254
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A+ L + M +G P+ T N+L+ G CL + D+A LL M + C + +
Sbjct: 86 LSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGT 145
Query: 61 LING 64
L++G
Sbjct: 146 LVDG 149
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ P+ T L+DGF R +LVS+ KG + + FS+S
Sbjct: 121 LDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSS 180
Query: 61 LING 64
LI+G
Sbjct: 181 LISG 184
>gi|297814291|ref|XP_002875029.1| hypothetical protein ARALYDRAFT_912211 [Arabidopsis lyrata subsp.
lyrata]
gi|297320866|gb|EFH51288.1| hypothetical protein ARALYDRAFT_912211 [Arabidopsis lyrata subsp.
lyrata]
Length = 653
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD N + + Q PD NALM G A D A LL M KGC D SH+I
Sbjct: 458 MDLFNEMIKEEDQEESGPDVYAYNALMSGMVKAGMIDEANLLLRKMEEKGCIADVNSHNI 517
Query: 61 LING 64
++NG
Sbjct: 518 IMNG 521
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN L M ++G D ++ N +M+GF +RA EL +M G K D +++
Sbjct: 493 IDEANLLLRKMEEKGCIADVNSHNIIMNGFARTGVPERAIELFETMKHSGLKPDGITYNT 552
Query: 61 LI 62
L+
Sbjct: 553 LL 554
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L ++M ++G P+ T A++DGF + + ELL MGSKG + ++ +L
Sbjct: 762 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVL 821
Query: 62 IN 63
I+
Sbjct: 822 ID 823
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ AL+DGFC R + AR+LL +M +GC+ + + LI+G
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 684
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G P+ +AL+DG C + D A+E+ M G +++S
Sbjct: 656 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSS 715
Query: 61 LIN 63
LI+
Sbjct: 716 LID 718
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ + M++ P+ ++DG C + D A +L+ M KGC+ + +++ +
Sbjct: 727 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 786
Query: 62 ING 64
I+G
Sbjct: 787 IDG 789
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
LM++ G PD T N+L+ G+C + + A +L M +G QDA S++ LI G
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEG 208
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + + RG+ P++ T N +++G C A +FD A L +M S G D +++S
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSP 480
Query: 61 LI 62
I
Sbjct: 481 FI 482
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + E M +G P+ T NA++ GFC A + +A LL M G + D ++++
Sbjct: 316 MSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNL 375
Query: 61 LING 64
LI G
Sbjct: 376 LIRG 379
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
RG + D + AL++GFC A R D A EL M + D ++H+ L+ G
Sbjct: 193 RGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKG 239
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + M G+ P TC +++ +C R A + SM KGC+ + ++++ +
Sbjct: 282 EEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAI 341
Query: 62 ING 64
+ G
Sbjct: 342 VQG 344
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M + GV PD T N L+ G C+ A LL M G D +++++LI
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLI 412
Query: 63 NG 64
+
Sbjct: 413 DA 414
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L EL ++ + P CN ++D C + D A +L+ M KGC+ D ++++ILI G
Sbjct: 427 LKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIG 484
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+ +A L E IQ G +PD + N + G C +A EL+ M GC D +++
Sbjct: 208 VQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNN 267
Query: 60 ILINGGSARIRK 71
IL+ GG R+++
Sbjct: 268 ILV-GGLCRVKE 278
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+ +A L E M + G +PDT T N L+ G C R RE+L + G C + +++
Sbjct: 244 VQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYT 303
Query: 60 ILING 64
+I+G
Sbjct: 304 SVISG 308
>gi|224115578|ref|XP_002332091.1| predicted protein [Populus trichocarpa]
gi|222874911|gb|EEF12042.1| predicted protein [Populus trichocarpa]
Length = 521
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+ L M+ +G +P+ +T N + G+CL D+ D+A L SM + G K + + +
Sbjct: 115 LEKADWLIREMLDKGPSPNCATYNTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNT 174
Query: 61 LING 64
L++
Sbjct: 175 LLHA 178
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M Q+G+ P+ + N+L+ GF ADRF A EL M G K + ++H + I
Sbjct: 478 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 537
Query: 63 N 63
N
Sbjct: 538 N 538
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M GV P+ + + A RFD A +L M ++GCK D +H++LI
Sbjct: 346 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 397
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L ++ +G +P T L+DG A R + A L M GCK + ++I
Sbjct: 966 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 1025
Query: 61 LING 64
L+NG
Sbjct: 1026 LLNG 1029
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + MI +GV PD T N L+ G+ ++ +L M + G K D +++
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313
Query: 61 LIN 63
L+N
Sbjct: 314 LLN 316
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ RG+ P+ T ++DG C A DRA + M KG K D +++
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278
Query: 61 LING 64
LI+G
Sbjct: 279 LIHG 282
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G+ M++ G+ P T + ++ G RF A+EL ++M + G + + + ++I
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628
Query: 61 LINGGS 66
++NG S
Sbjct: 629 ILNGLS 634
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS---KGCKQDAFSHSILIN 63
L + M + G PD + N L+ GFC R + A ELL M + C + S++I+IN
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211
Query: 64 G 64
G
Sbjct: 212 G 212
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA ++M+ G+ PD T N L+ G+C A R D A + M G ++S
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 61 LING 64
+++G
Sbjct: 594 ILHG 597
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD-AFSHSILIN 63
M+ GV P+ N+L+ G C D++++A+E M ++G + D F ++IL N
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L +LM + G P + L+ G CL R D A + L M S G K D ++++ L+
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560
Query: 63 NG 64
+G
Sbjct: 561 HG 562
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A G+ + MI +GV PD T N L+ G+ ++ +L M + G K D +++
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313
Query: 61 LIN 63
L+N
Sbjct: 314 LLN 316
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M+ RG+ P+ T ++DG C A DRA + M KG K D +++
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278
Query: 61 LING 64
LI+G
Sbjct: 279 LIHG 282
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G+ M++ G+ P T + ++ G RF A+EL ++M + G + + + ++I
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628
Query: 61 LINGGS 66
++NG S
Sbjct: 629 ILNGLS 634
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L +LM + G PD + L+ G CL R D A + L M S G K D ++++ L+
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560
Query: 63 NG 64
+G
Sbjct: 561 HG 562
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA ++M+ G+ PD T N L+ G+C A R D A + M G ++S
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 61 LING 64
+++G
Sbjct: 594 ILHG 597
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD-AFSHSILIN 63
M+ GV P+ N+L+ G C D++++A+E M ++G + D F ++IL N
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS---KGCKQDAFSHSILIN 63
L + M + G PD + N L+ GFC R + A ELL M + C + S++ +IN
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211
Query: 64 G 64
G
Sbjct: 212 G 212
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ + M + G+ P T T +L+DGFC + D A +LL M KG K D ++ LI+
Sbjct: 526 ASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID 585
Query: 64 GGSAR 68
G R
Sbjct: 586 GFCKR 590
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ G+ D T +L+DG + R A ++ M SKG D +H++
Sbjct: 628 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 687
Query: 61 LING 64
LING
Sbjct: 688 LING 691
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + +I +G++P+ + N ++ G C D + A ++ M G +A + +I
Sbjct: 383 MNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTI 442
Query: 61 LING 64
L++G
Sbjct: 443 LMDG 446
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G+ PD L++G C +F+ AR++L M K ++ LI G
Sbjct: 673 MLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 726
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +MIQ V PD T +L++G C+ D AR++ M GC + ++ LI
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 63 NG 64
+G
Sbjct: 336 HG 337
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q+GV +T T L+ G+CL R D A+E+ M S+ D ++++L++G
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + LM + G P+ L+ GFC + R + ++ M KG + ++++
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 61 LING 64
LI G
Sbjct: 369 LIQG 372
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M++R + P+ T AL+D F + A+EL M D F++ LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 63 NG 64
NG
Sbjct: 301 NG 302
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M++ + PD T N+++ G C DRA +++ S+ SKG D +++I
Sbjct: 212 IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNI 271
Query: 61 LING 64
L+ G
Sbjct: 272 LLRG 275
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + ++ G +PD NA++ GFC A+R D A ++L M +KG D +++I
Sbjct: 108 IDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNI 166
Query: 61 LINGGSAR 68
LI +R
Sbjct: 167 LIGSLCSR 174
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLV--SMGSKGCKQDAFSHSIL 61
A G+ M+ +GV+PD T N+L+ C D A ELLV M S CK S++I+
Sbjct: 425 ALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIV 484
Query: 62 ING 64
+ G
Sbjct: 485 LLG 487
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + +G PD T N L+ G +++ EL+ M ++GC+ + ++S+
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306
Query: 61 LIN 63
LI+
Sbjct: 307 LIS 309
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E GL + M ++G+ PD + L+ C R D A E+L M S GC D +++
Sbjct: 317 VEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNT 376
Query: 61 LI 62
++
Sbjct: 377 IL 378
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A+ + M + G+ P T T +L+DGFC + D A +LL M KG K D ++ LI+
Sbjct: 408 ASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID 467
Query: 64 GGSAR 68
G R
Sbjct: 468 GFCKR 472
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M+ G+ D T +L+DG + R A ++ M SKG D +H++
Sbjct: 510 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 569
Query: 61 LING 64
LING
Sbjct: 570 LING 573
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + +I +G++P+ + N ++ G C D + A ++ M G +A + +I
Sbjct: 265 MNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTI 324
Query: 61 LING 64
L++G
Sbjct: 325 LMDG 328
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G+ PD L++G C +F+ AR++L M K ++ LI G
Sbjct: 555 MLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 608
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L + M+ +G P+T +AL+DG C + D AR L M +KG ++F++S L
Sbjct: 362 NQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSL 421
Query: 62 ING 64
+ G
Sbjct: 422 MRG 424
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + M +G P+ T NAL+ G CL + ++A LL M S C + +
Sbjct: 256 LGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGT 315
Query: 61 LING 64
LING
Sbjct: 316 LING 319
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G M +G P++ T ++LM G+ A +A + M + C + +SI
Sbjct: 396 LDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSI 455
Query: 61 LING 64
LING
Sbjct: 456 LING 459
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A L M ++G+ P+T+T L+DG C A F+RA EL+ M +G + +++
Sbjct: 359 MNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNA 418
Query: 61 LING 64
+++G
Sbjct: 419 IVDG 422
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ A L +M + G +P+ T NA++DG C R A ++L S G D +++IL
Sbjct: 395 ERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTIL 454
Query: 62 IN 63
I+
Sbjct: 455 IS 456
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA GL + M+ +GV PD + + ++ GF DRA ++ V M K DA ++S
Sbjct: 209 MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSS 268
Query: 61 LING 64
LI G
Sbjct: 269 LIQG 272
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA G M +G+ P+ T N +++G C R E+LV M KG D +++ L
Sbjct: 35 DEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTL 94
Query: 62 ING 64
+NG
Sbjct: 95 VNG 97
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M + G P T NAL++G C+ R + A LL M KG D S+S
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233
Query: 61 LING 64
+I+G
Sbjct: 234 IISG 237
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G P+ T N ++DG+C R D A L SMG KG + + + +++ING
Sbjct: 9 MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + M+ + PD T L++ +C ++A L M KG DA ++++
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338
Query: 61 LINGGSARIR 70
LING + + R
Sbjct: 339 LINGLNKQAR 348
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELL-VSMGSKGCKQDAFSHS 59
+DEA + E M+ RG+ P+ T N L+ G C +FD+ +E+L ++G +G D +++
Sbjct: 256 IDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYN 315
Query: 60 ILING 64
L+N
Sbjct: 316 TLMNA 320
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING----GSARI 69
GV PDT T N L+ GFC D M C+ D +++ L++G G RI
Sbjct: 163 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRI 221
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
RG PDT T N LM+ C A FD A ++ M + D+ ++S+LI
Sbjct: 305 RGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLI 353
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ ++PD T L+ G+C+ D A + M S+G K + +++ LI G
Sbjct: 234 KDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKG 284
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E + + M + G PDT T NA+++G C + + A ++ M KGCK D FS + +
Sbjct: 210 EEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTI 269
Query: 62 I 62
I
Sbjct: 270 I 270
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A+ + + M+++G PD + N ++ C + D+A +LL M +GC D S+ I
Sbjct: 244 LESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRI 303
Query: 61 LING 64
+ +G
Sbjct: 304 IFDG 307
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E M +GV PD +CNA++ G+C A + +M GC D F+++
Sbjct: 500 LGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 559
Query: 61 LING 64
+I+G
Sbjct: 560 VISG 563
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M +R V PD + N L+ G C A+ +L M K + D F ++
Sbjct: 430 VSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYAT 489
Query: 61 LING 64
LI+G
Sbjct: 490 LIDG 493
Score = 37.4 bits (85), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A + E M+++ V PD L+DGF ++ AR++ M KG + D S +
Sbjct: 465 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNA 524
Query: 61 LING 64
+I G
Sbjct: 525 MIKG 528
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I+R +NP+ + L+ GFC+ A +LL+ M +G D + LI+G
Sbjct: 371 IRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 423
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ M+ G PDT+T N L+ C ++ + A +L + KG + ++ +I
Sbjct: 352 LEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNI 411
Query: 61 LING 64
LIN
Sbjct: 412 LINA 415
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E M G PD T N L+D C + + +A +LL M GC Q +++ +I+G
Sbjct: 428 LFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLC 487
Query: 67 ARIR 70
R R
Sbjct: 488 KRRR 491
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A G + I G PD T + ++G C D A ++L M +GC+ D +++S +I
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343
Query: 63 N 63
N
Sbjct: 344 N 344
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA + +G++P+ T N L++ C A L M S GC D +++I
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446
Query: 61 LIN 63
LI+
Sbjct: 447 LID 449
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M G+ + T N L+DG C A+R D A EL+ M S+G + + +++
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551
Query: 61 LIN 63
++
Sbjct: 552 ILT 554
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
V PD +T LM+GF + A L M GC + + ++LING
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + M + PDT T N L+DG C + + AR M GCK D ++++I
Sbjct: 450 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 509
Query: 61 LING 64
LI+G
Sbjct: 510 LISG 513
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L E + G P +T NAL++G C R + A +LL + GC D +++
Sbjct: 275 IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 334
Query: 61 LING 64
LI+G
Sbjct: 335 LIDG 338
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG+ P+ +AL+ G C A + D A E+L M C D +++ILI+G
Sbjct: 425 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 478
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L ++ G PD T +L+DG R A +L M S+G D ++
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTA 369
Query: 61 LING 64
LI G
Sbjct: 370 LIRG 373
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ + + M G PD T + ++DG A R A + SM ++G + +S
Sbjct: 380 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 439
Query: 61 LING 64
LI+G
Sbjct: 440 LIHG 443
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E ++Q+G+ P+ T N+L+D A+ + A SM C + ++ I
Sbjct: 673 IDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 61 LINGGSARIRK 71
LIN G ++RK
Sbjct: 733 LIN-GLCKVRK 742
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E L M ++G DT N ++DGFC + ++A +LL M +KG + ++ +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 62 ING 64
I+G
Sbjct: 629 IDG 631
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M + G+ P+ T N ++D C + + D A + M K C D +
Sbjct: 393 LDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCS 452
Query: 61 LING 64
LI+G
Sbjct: 453 LIDG 456
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M ++G+ P+ T L+D C + ++ARELL M KG + +++ LI
Sbjct: 341 EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALI 400
Query: 63 NGGSAR 68
NG R
Sbjct: 401 NGYCKR 406
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A G+ M++R V PD T N+L+DG C + FD A LL M +G D ++++ +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMI 504
Query: 63 N 63
+
Sbjct: 505 D 505
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EAN ++++ G++PD T +L+ G+C D A ++ M KGC+++ +++
Sbjct: 234 VEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTH 293
Query: 61 LING 64
LI+G
Sbjct: 294 LIHG 297
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + + Q+ V P+ AL+DG+C A + + A +L M SK C ++ + +
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 61 LING 64
LI+G
Sbjct: 573 LIHG 576
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + M+ G PD T + +C R A +++ M G D F++S L
Sbjct: 619 DHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSL 678
Query: 62 ING 64
I G
Sbjct: 679 IKG 681
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L LM RG+ PD T +++D C + R + A +L S+ K + ++ L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538
Query: 62 ING 64
I+G
Sbjct: 539 IDG 541
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L M+++G+ P+ T NAL++G+C + A +++ M S+ + + +++
Sbjct: 374 LEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNE 433
Query: 61 LINGGSAR 68
LI G R
Sbjct: 434 LIKGYCKR 441
>gi|255660980|gb|ACU25659.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 376
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + ++ +G+NP T + LM G CL + ++A +L + SKG K D H+ILI+
Sbjct: 218 AYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIH 277
Query: 64 G 64
G
Sbjct: 278 G 278
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G +A+++G C BRA +L M GCK +A ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKPNAHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
ELM G D+ T L+ GFC D++ +L KG AF++S +ING
Sbjct: 83 ELMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLEMAEQKGGVLXAFAYSAMING 138
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M RG+ P T N+++ G C RFD+A+E+ +M D S +I
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267
Query: 61 LING 64
LI G
Sbjct: 268 LIGG 271
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M +RGV PD T L+ G+C F+ A +L ++ + + D +++ LI
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Query: 63 NG 64
+G
Sbjct: 445 DG 446
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M+ G PD T N L++G C R A +LL M +G D + +
Sbjct: 348 MSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTT 407
Query: 61 LING 64
LI+G
Sbjct: 408 LIHG 411
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + ++++ + PD T N+L+DG C +A EL M ++ + ++SI
Sbjct: 418 FENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSI 477
Query: 61 LIN 63
LI+
Sbjct: 478 LID 480
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + M+++G P+ T N+++ G+C + + ++ L M D + +
Sbjct: 488 VEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNT 547
Query: 61 LING 64
LI+G
Sbjct: 548 LIHG 551
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + +M + V PD T N +++GF A + MG G + D +++
Sbjct: 558 MHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMS 617
Query: 61 LING 64
LING
Sbjct: 618 LING 621
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+++G+ P+ + NAL++G C DRA+ L + KG +A +++I
Sbjct: 768 VDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNI 827
Query: 61 LI 62
LI
Sbjct: 828 LI 829
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L LM++RGV P+ +C ++D F DRA L + +G + + + +
Sbjct: 454 DDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTM 513
Query: 62 ING 64
I+G
Sbjct: 514 ISG 516
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M++ G+ + CN L+ G+C + A + V M K D +S++
Sbjct: 348 MEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNT 407
Query: 61 LING 64
L++G
Sbjct: 408 LLDG 411
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELL 43
LM +RGV+ + TC LM G+C + D A +LL
Sbjct: 286 LMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLL 319
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L EL+ + ++PD T +++ G+C + ++A L +M S G K +AF+ +ILING
Sbjct: 295 LKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILING 352
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA G + R + N ++DGFC A D A +L M K CK D +++I
Sbjct: 429 LHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTI 488
Query: 61 LING 64
LI G
Sbjct: 489 LIIG 492
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHS 59
+D+A L M G +PD T N L++GFC + DR +LL + SK D +++
Sbjct: 253 VDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYT 312
Query: 60 ILING 64
+I+G
Sbjct: 313 SIISG 317
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 19 DTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
D+ + N L+ G C + D+A EL M GC D +++ LING
Sbjct: 236 DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLING 281
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + E M+ G PD T +L+DG C + +R+ +L + ++ + ++ +I
Sbjct: 359 MVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAI 418
Query: 61 LING 64
L N
Sbjct: 419 LTNA 422
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + M ++ PD T L+ G C+ R A + M GC D+ + +
Sbjct: 464 VDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTS 523
Query: 61 LIN 63
LI+
Sbjct: 524 LIS 526
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + M Q G P+T+ CN +++ C R D A + L +MG GC D S++
Sbjct: 297 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 356
Query: 61 LING 64
++ G
Sbjct: 357 VLRG 360
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M+QRG P T L++ C + F A +L M +KGC + +++++I
Sbjct: 159 DALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVII 218
Query: 63 NG 64
NG
Sbjct: 219 NG 220
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M +G P+ T N +++G C R D A+E+L + S G + D S++ ++
Sbjct: 194 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253
Query: 63 NGGSARIR 70
G A R
Sbjct: 254 KGLCAARR 261
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
EL P+T T L+ G C A+R D A ELL M K C +A + ++L++
Sbjct: 442 ELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVS 496
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A M G NPDT + ++ G C A R++ A+ELL M K C + + +
Sbjct: 332 VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNT 391
Query: 61 LI 62
I
Sbjct: 392 FI 393
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L ELM + G + T NAL+ GFC+ R D A EL ++ C+ + +++
Sbjct: 402 IEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTT 458
Query: 61 LING 64
L+ G
Sbjct: 459 LLTG 462
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M++ G P+ T N L+DG + A ELL + SKG D ++S
Sbjct: 504 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 563
Query: 61 LIN 63
+++
Sbjct: 564 VVD 566
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEANGL M+ G+ P+ T L+DG C R D A ++ M ++G D +++
Sbjct: 222 MDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNT 281
Query: 61 LING 64
LI G
Sbjct: 282 LIYG 285
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M+ +G +PD T N L+ G C +AR LL M KG K D +++
Sbjct: 257 LDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTT 316
Query: 61 LING 64
LI+G
Sbjct: 317 LIDG 320
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M GV PD T + L++G C R D A L M G + + +
Sbjct: 187 LDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTT 246
Query: 61 LING 64
LI+G
Sbjct: 247 LIDG 250
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + + + + G+ P + N LM+G+ D L +M + G + D +++S+
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSV 211
Query: 61 LING 64
LING
Sbjct: 212 LING 215
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L E + G P +T NAL++G C R + A +LL + GC D +++
Sbjct: 50 IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 109
Query: 61 LING 64
LI+G
Sbjct: 110 LIDG 113
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + M + PDT T N L+DG C + AR M GCK D ++++I
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284
Query: 61 LING 64
LI+G
Sbjct: 285 LISG 288
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG+ P+ +AL+ G C A + D A E+L M C D +++ILI+G
Sbjct: 200 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 253
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ + + M +G PD T + ++DG C A R A + SM ++G + +S
Sbjct: 155 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 214
Query: 61 LING 64
LI+G
Sbjct: 215 LIHG 218
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T N L+ GFC A D A + M S C + ++ LI+G
Sbjct: 270 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISG 323
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M RG+ DT AL+ G A + +A + +M S+GC D + S +I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181
Query: 63 NG 64
+G
Sbjct: 182 DG 183
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L ++ G PD T +L+DG R A +L M S+G D ++
Sbjct: 85 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTA 144
Query: 61 LING 64
LI G
Sbjct: 145 LIRG 148
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A G+ + M +P+ T L+ G C + +A M +GC D+F +S L
Sbjct: 296 DAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSL 355
Query: 62 ING 64
++G
Sbjct: 356 VDG 358
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M+ G+ PDT T N L+D C A + DRA EL M KG + +I
Sbjct: 462 LDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNI 521
Query: 61 LIN 63
+IN
Sbjct: 522 MIN 524
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L E M+++G P +T N +++ F +R+D + LL +M S+G +A +++ L
Sbjct: 498 DRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTL 557
Query: 62 IN--GGSAR 68
I+ G S R
Sbjct: 558 IDIYGKSGR 566
>gi|125553201|gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indica Group]
Length = 440
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + M +RGV P+ +T LM G C ADR A +L+ M +GC+ D ++ +L++
Sbjct: 218 AERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLMFDMEYRGCQADVVNYGVLMS 277
Query: 64 GGSAR 68
+ R
Sbjct: 278 SRARR 282
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ + M+ RGV P T N L+ C A L+ M +G +A ++++L+
Sbjct: 183 ARGVLDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMR 242
Query: 64 G 64
G
Sbjct: 243 G 243
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ RG+ PD T N +++G C DRA E L + GC +++I
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291
Query: 61 LI 62
L+
Sbjct: 292 LL 293
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E++ + G PD NA++ GFC ADR D A ++L M +G + D +++I
Sbjct: 128 IEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNI 186
Query: 61 LINGGSARIR 70
LI R R
Sbjct: 187 LIGNFCGRGR 196
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ + + M +RG PD T N L+ FC R D A ++ + CK +++I
Sbjct: 162 VDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTI 221
Query: 61 LING 64
LI
Sbjct: 222 LIEA 225
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-GSKGCKQDAFSHSILI 62
A G+ M+ G++PD T N+L+ C D+A ELLV M S+ C+ S++ ++
Sbjct: 445 ALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVL 504
Query: 63 NG 64
G
Sbjct: 505 LG 506
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EAN + + M G+NP+ T N L+DGFC + +A L + S+G +++IL
Sbjct: 320 NEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 62 ING 64
++G
Sbjct: 380 VSG 382
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + M +RG+ P T L+D F +D ++A +L SM G D ++S+LI+
Sbjct: 392 AGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIH 451
Query: 64 G 64
G
Sbjct: 452 G 452
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M + G+ PD T + L+ GFC+ R + A L SM K + + ++
Sbjct: 424 MEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNT 483
Query: 61 LING 64
++ G
Sbjct: 484 MVLG 487
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G +P+ L+DG C ++A++L MG G + +++++LI+G
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M G+ PD T N++++G C A + E M KGC+ +A +++I
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 434
Query: 61 LI 62
LI
Sbjct: 435 LI 436
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+G+ M Q G+ PDT + N L+ GFC D A L + KG A + +I
Sbjct: 445 LEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504
Query: 61 LINGGSARI 69
LI S+++
Sbjct: 505 LIGAYSSKL 513
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M + PD T N LM G C + A + L M ++GC D F+++
Sbjct: 166 LEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNT 224
Query: 61 LINGGSAR 68
+I+G R
Sbjct: 225 IIDGYCKR 232
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E N E MI +G P+ T N L++ FC ++ + A ++V M G D S + LI
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471
Query: 63 NG 64
+G
Sbjct: 472 HG 473
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA M+ +G PD T N ++DG+C D A ELL KG D ++
Sbjct: 200 VQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCS 259
Query: 61 LING 64
LING
Sbjct: 260 LING 263
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I +G PD T N ++DG+C + D A +L+ M G DA +++ ++NG
Sbjct: 351 IVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNG 403
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
MI +G PD T L+DG C A DRA L M SKG
Sbjct: 525 MISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKG 564
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + M+ GV PD T + FC+ R A LL S+ +GC ++ +
Sbjct: 27 DQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTV 86
Query: 62 ING 64
+ G
Sbjct: 87 VRG 89
>gi|413944087|gb|AFW76736.1| hypothetical protein ZEAMMB73_938811 [Zea mays]
Length = 496
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
M EA L E MI++ + PD N ++DGFC + D+AR + M C+ + F+++
Sbjct: 236 MKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYA 295
Query: 60 ILING 64
LING
Sbjct: 296 TLING 300
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E M GV PD + AL+ C D L++ M KGC+ D ++++
Sbjct: 307 IEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKGCRADVVTYNL 366
Query: 61 LING 64
+I G
Sbjct: 367 VIEG 370
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE GL M ++G D T N +++G C R A LL S+ +G K + S+ I
Sbjct: 342 VDEGIGLVLEMKEKGCRADVVTYNLVIEGLCKDGRTVEAMGLLESVPLEGVKLNVASYRI 401
Query: 61 LIN 63
L+N
Sbjct: 402 LMN 404
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M ++G P+ T N L+DG+C + D ELL SM KG + + S+++
Sbjct: 221 LDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280
Query: 61 LING 64
+ING
Sbjct: 281 VING 284
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ +G+ PDT T ++L+ GFC R A +L M G D F+++
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTA 525
Query: 61 LING 64
LIN
Sbjct: 526 LINA 529
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M+Q V+P+ T N L+ GFCLA D A M KGC + +++ LI+ G ++R
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID-GYCKLR 254
Query: 71 K 71
K
Sbjct: 255 K 255
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + + MI G +P T NAL++G C+A + A +L M KG D S+S
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455
Query: 61 LING 64
+++G
Sbjct: 456 VLSG 459
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++ G+ PD T AL++ +C+ +A +L M KG D ++S+LI
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562
Query: 63 NGGSARIR 70
NG + + R
Sbjct: 563 NGLNKQAR 570
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + E M ++G+ PD + + ++ GFC + D A + M +KG K D ++S
Sbjct: 431 MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSS 490
Query: 61 LING 64
LI G
Sbjct: 491 LIQG 494
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ RGV+P ++ N +M GFC + AR+ L M K D S++ LI
Sbjct: 325 EALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLI 384
Query: 63 NG 64
G
Sbjct: 385 YG 386
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M ++GV P+ T N L++GFC + D+A + + M KG + ++++ILIN
Sbjct: 613 MQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILIN 665
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
+M + G+ P +T N ++ FC RA +L+ M +GC + ++LING S +
Sbjct: 227 MMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKK 285
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L E MI RG++PD T L++G C A+E M G D F+++
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTA 487
Query: 61 LING 64
I G
Sbjct: 488 RIVG 491
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G PD N L+ G A + AREL SM S+GCK D +++ +I G
Sbjct: 159 MPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAG 212
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM--GSKGCKQDAFSH 58
+DEA L E M Q V+P T L+D C R +A E+ M G C + A+S
Sbjct: 219 LDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSV 278
Query: 59 SILING 64
ILING
Sbjct: 279 LILING 284
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E M RG P T A+++ +C F R E+L SM S+GC + ++++
Sbjct: 241 IDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTM 300
Query: 61 LING 64
++
Sbjct: 301 IMTS 304
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M +G +P+ T +M +RF+ A + M S GCK D ++ LIN
Sbjct: 286 MSSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALIN 338
>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 891
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
++EA GL + M+ +G+ PD T AL++G+C +A +L M +KG K D +S
Sbjct: 660 LEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDIWS 716
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ PD + L+DG C A+ + AR L M +KG D +++ LING
Sbjct: 640 IEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALING 688
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M G P+ T N ++D C D+ARELL S+ S+GCK + +++ ++
Sbjct: 216 QALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVL 275
Query: 63 NG 64
G
Sbjct: 276 KG 277
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + RG P+T N ++ GFC +R+ A E+L M + C + + ++
Sbjct: 249 VDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNV 308
Query: 61 LIN 63
+IN
Sbjct: 309 IIN 311
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M + G + T NA++ G C D A ELL +M S GCK D +++ ++ G
Sbjct: 327 EKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKG 382
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 9 ELMIQRGVN---PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
ELMI+ N PD ST N ++ +C +A E+ M KGC ++ ++S +I G
Sbjct: 394 ELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGG 452
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+D A L M G PD T N ++ G C ADR++ A EL++ M
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM 399
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + + G++P T N ++ G C + D A ++L M S GC D ++ I
Sbjct: 493 IEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYII 552
Query: 61 LING 64
LI G
Sbjct: 553 LIEG 556
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG PD T N L+ C + +A EL+ M ++GC+ + +++++I+
Sbjct: 189 MLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A G+ + MI+RG+ PD T AL+ G C DRA LL M KG D + S
Sbjct: 752 LHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSA 811
Query: 61 LING 64
L++G
Sbjct: 812 LLHG 815
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + +++++RG PD ++ +C + A +L M +G K D + ++
Sbjct: 632 MRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTV 691
Query: 61 LING-GSARIRK 71
L++G A I+K
Sbjct: 692 LLDGHHKAHIKK 703
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+AN + + M++ G P++ NAL++GFC + + A ++ + M S GC +++ LI
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516
Query: 63 NG 64
+G
Sbjct: 517 DG 518
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L + M++RG PD T +L+ G C + D A + + G + D H+ILI
Sbjct: 527 EASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILI 586
Query: 63 NG 64
+G
Sbjct: 587 HG 588
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + +RGV PD T + LM G D+ D A +LL M + G + DA ++
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233
Query: 61 LING 64
L++G
Sbjct: 234 LLSG 237
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M G P T N L+DG C A+++ A L M +G K D +++ LI G
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+L+ G +P+ +T ++DG C RF A E+ M + + D ++ ILI+G
Sbjct: 253 QLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHG 308
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M ++ +P+ T N LMDGF D+A L ++ G K D +++
Sbjct: 595 VDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNT 654
Query: 61 LING 64
I G
Sbjct: 655 RIKG 658
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + MI G+ PD T N+++ FC +A +++ +M S GC+ D ++
Sbjct: 400 VQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGT 459
Query: 61 LING 64
LI G
Sbjct: 460 LIGG 463
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G PD T N L+D C + A LL M GC ++ +++ LI+G
Sbjct: 305 MKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDG 358
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA GL M G + T N L+DGFC + + A E+ M +G +++ +++
Sbjct: 330 LQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNT 389
Query: 61 LING 64
LI+G
Sbjct: 390 LIDG 393
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M +G++ ++ T N L+DG C + R A +L+ M +G K D F+++
Sbjct: 365 IEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNS 424
Query: 61 LIN 63
++
Sbjct: 425 MLT 427
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E ++Q+G+ P+ T N L+D A+ + A SM C + ++SI
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759
Query: 61 LINGGSARIRK 71
LIN G R+RK
Sbjct: 760 LIN-GLCRVRK 769
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 4 ANGLAEL---MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
AN EL M ++G DT NA++DGFC + + ++A +LL M KG ++
Sbjct: 595 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 654
Query: 61 LING 64
+I+G
Sbjct: 655 VIDG 658
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G +PD + N MD A ++ R L + + G DA S+SILI+G
Sbjct: 535 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-GSKGCKQDAFSHS 59
+DEA + E M RG+ P+ T N L+ G C A ++D+ +E+L M G G DA + +
Sbjct: 314 VDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFN 373
Query: 60 ILIN 63
LIN
Sbjct: 374 TLIN 377
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E++ GV PDT T N L+ GFC D M S C D +++ L++G
Sbjct: 215 EMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDG 270
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ ++PD T L+ G+C D A ++L M +G K + +++ LI G
Sbjct: 292 KDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKG 342
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G PD N L+ G A + AREL SM S+GCK D +++ +I G
Sbjct: 105 MPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAG 158
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M Q V+P T L+D C R +A E+ M C ++S+
Sbjct: 165 LDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSV 224
Query: 61 LIN 63
L N
Sbjct: 225 LFN 227
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E ++Q+G+ P+ T N L+D A+ + A SM C + ++SI
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514
Query: 61 LINGGSARIRK 71
LIN G R+RK
Sbjct: 515 LIN-GLCRVRK 524
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 4 ANGLAEL---MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
AN EL M ++G DT NA++DGFC + + ++A +LL M KG ++
Sbjct: 350 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 409
Query: 61 LING 64
+I+G
Sbjct: 410 VIDG 413
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G +PD + N MD A ++ R L + + G DA S+SILI+G
Sbjct: 290 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+ G P+ T N L+ G C A R D R L+ M S D F++SIL +G
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 130
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L E M GV+ T N L+ G C + + D A EL+ ++ ++G + D S++ +
Sbjct: 348 EQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 407
Query: 62 ING 64
I+
Sbjct: 408 ISA 410
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
+A L M + GV+P T N L+D + A + ++ +L M KG K D S
Sbjct: 244 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 298
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M +G+ P+ NAL+DG C + RAR+L M KG + D+ ++S
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634
Query: 61 LING 64
+I+G
Sbjct: 635 MIDG 638
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + M ++G+ PD+ T + ++DG+C ++ A L M SKG + +F ++
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669
Query: 61 LING 64
L++G
Sbjct: 670 LVHG 673
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ++M+ G+ + T N L+ G C + ++A E+L M + GCK ++ + +
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319
Query: 61 LING 64
LI G
Sbjct: 320 LIEG 323
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + MI G P++ T L++G+C RA ELL M + A S+
Sbjct: 295 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 354
Query: 61 LING 64
+ING
Sbjct: 355 MING 358
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA E M + G+ PD + C+AL+DGF D + M S G + ++++
Sbjct: 225 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 284
Query: 61 LING 64
LI+G
Sbjct: 285 LIHG 288
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV PD TC+A + G R A ++ + KG D F++S LI+G
Sbjct: 519 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 568
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++G+ PD T ++L+ GFC ++A EL M KG + F ++ L++G
Sbjct: 552 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 603
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RGV P+T TC+ + C R + ARE SM +KG K + S+S L++G
Sbjct: 307 MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHG 360
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M Q+GV P+ T N+++ C A D+A+ +L M G + D +++ LI
Sbjct: 229 EACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLI 288
Query: 63 NGGSA 67
+G S
Sbjct: 289 HGYST 293
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + + M+ G+ PD T L++G C R D L + KG K F++ I
Sbjct: 542 MSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGI 601
Query: 61 LING 64
+++G
Sbjct: 602 ILDG 605
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + +++I+ G D + +L+DG+CL + A + +M S G + D ++ L+
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568
Query: 63 NG 64
NG
Sbjct: 569 NG 570
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A G+ M+ GV PD T N L+ G+ ++ +A + M S+G + + S
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST 321
Query: 61 LI 62
+
Sbjct: 322 FV 323
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A MI +GV P+ + L+ GFC +A EL+ + +KG S +
Sbjct: 437 MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS 496
Query: 61 LIN 63
LIN
Sbjct: 497 LIN 499
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A ++M+ RG PD T N L+ C + D A E+L + SKGC +++
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409
Query: 61 LINGGS 66
+I+G S
Sbjct: 410 VIDGLS 415
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N L++G C R D A + L +M S GC+ + +H+I++
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 271
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P+ T N++M G C + + DRA + L M SK CK +++ILI G
Sbjct: 469 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M G P++ + N L+ GFC + DRA E L M S+GC D +++ L+
Sbjct: 321 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 378
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA M G P+ T N ++ C R+ A +LL M KGC + +I
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 304
Query: 61 LIN 63
LIN
Sbjct: 305 LIN 307
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M+ RG PD C +L+ GFC + +A ++ + G D ++++LI+G
Sbjct: 81 ESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISG 136
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + +Q+ PD T L++ C +A +LL M +KG K D ++++
Sbjct: 175 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234
Query: 61 LING 64
LING
Sbjct: 235 LING 238
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + +G +P T N ++DG + +RA +LL M KG K D ++S
Sbjct: 385 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 444
Query: 61 LINGGS 66
L++G S
Sbjct: 445 LVSGLS 450
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D + E M++ G PD T +++GFC D A LL SM + GC+ + S++I
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432
Query: 61 LING 64
++ G
Sbjct: 433 VLKG 436
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A G+ M G++P+ N L+ G C ADR++ A LL M K C D + +I
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNI 362
Query: 61 LIN 63
L++
Sbjct: 363 LVD 365
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G P+ T N L++ C ++A ELL M GC D S+S +I
Sbjct: 445 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 504
Query: 63 NG 64
+G
Sbjct: 505 DG 506
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M G P+T + ++ G C A+R+ A EL+ M +GC + + +
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467
Query: 61 LIN 63
LIN
Sbjct: 468 LIN 470
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
L +L+ G PD + NA++ G C+A R+ ++L+ M + GC + + S LI
Sbjct: 204 LRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLI 259
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA GL M + D T N L+D C DR E+L M GC D +++ +
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTV 398
Query: 62 ING 64
ING
Sbjct: 399 ING 401
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+ G P+ T + L+ C F+R E+ M GC D ++ +I+G
Sbjct: 239 LMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDG 296
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + E M+++GV PD N LM G C RF A+ LL M + DA+ ++
Sbjct: 431 IDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYAT 490
Query: 61 LING 64
L++G
Sbjct: 491 LVDG 494
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E+++ +G++P N ++ G C + A + M D ++HS
Sbjct: 501 LDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST 560
Query: 61 LING 64
+I+G
Sbjct: 561 VIDG 564
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L + M+ RG+ P T N LM+GFC+ + LL M KG DA +++
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613
Query: 61 LI 62
L+
Sbjct: 614 LM 615
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A L M+Q G+ P+ T AL+DG C D A ELL M KG + + ++
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508
Query: 61 LING 64
++NG
Sbjct: 509 MVNG 512
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ + L M+++G+ PD T N LM C+ + + ++ M ++G D+ +++I
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 61 LING 64
LI G
Sbjct: 649 LIKG 652
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M G++PD T ++D +C D+A +LL M +G + + ++
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 61 LING 64
L+NG
Sbjct: 579 LMNG 582
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A+ L + M+ RG+ P T N LM+GFC+ + LL M KG DA +++
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613
Query: 61 LI 62
L+
Sbjct: 614 LM 615
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A L M+Q G+ P+ T AL+DG C D A ELL M KG + + ++
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508
Query: 61 LING 64
++NG
Sbjct: 509 MVNG 512
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ + L M+++G+ PD T N LM C+ + + ++ M ++G D+ +++I
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 61 LING 64
LI G
Sbjct: 649 LIKG 652
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M G++PD T ++D +C D+A +LL M +G + + ++
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 61 LING 64
L+NG
Sbjct: 579 LMNG 582
>gi|356523086|ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17670-like [Glycine max]
Length = 456
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
LM+ G+ PDT+T + + C A R D A EL+ SK C D ++ + L+
Sbjct: 140 LMLAAGITPDTATADVAVRSLCSAGRLDHAVELIKEFASKHCPPDTYTFNFLV 192
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L +M ++G PD T +LM+G C A LL M +KGC +A +++ L+
Sbjct: 311 EARKLLRVMAEKGYFPDEVTYTSLMNGLCRKGDALGALALLGEMEAKGCSPNACTYNTLL 370
Query: 63 NG 64
+G
Sbjct: 371 HG 372
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + GV PD T N L+ G + R AR+LL M KG D +++ L+NG
Sbjct: 284 MKEEGVEPDLVTYNTLIFGLSKSGRVTEARKLLRVMAEKGYFPDEVTYTSLMNG 337
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E+M RG+ PD T NAL++G C AR+LL M G K D + + L++G
Sbjct: 355 EIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDG 410
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EANGL + M + G+ P+ T L+DG C + D A M +G + D +++
Sbjct: 312 VEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNA 371
Query: 61 LING 64
LING
Sbjct: 372 LING 375
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L MI G PD T LMDG C D A E+ M +G + D + +
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441
Query: 61 LING 64
LI+G
Sbjct: 442 LISG 445
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+RG+ P + N L+ G+C + + L M S+ D F++S LING
Sbjct: 254 RRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALING 305
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + + M++ G+ D AL+ G C R A +L M S G K D ++++
Sbjct: 417 MDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTM 476
Query: 61 LIN 63
+I+
Sbjct: 477 VID 479
>gi|297726211|ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa Japonica Group]
Length = 1487
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 19 DTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
D T + L+DG+CLA + D A +LL M S G K D ++S LING
Sbjct: 1206 DVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLING 1251
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ PDT T + L++G+C R + A L M G + +++I
Sbjct: 1223 MDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNGVSPNIITYNI 1282
Query: 61 LING 64
++ G
Sbjct: 1283 VLQG 1286
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M +G+ P+ NAL+DG C + RAR+L M KG + D+ ++S
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723
Query: 61 LING 64
+I+G
Sbjct: 724 MIDG 727
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + M ++G+ PD+ T + ++DG+C ++ A L M SKG + +F ++
Sbjct: 699 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 758
Query: 61 LING 64
L++G
Sbjct: 759 LVHG 762
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ++M+ G+ + T N L+ G C + ++A E+L M + GCK ++ + +
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCL 408
Query: 61 LING 64
LI G
Sbjct: 409 LIEG 412
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M ++G+ P+T T + G C A R + A+ M G K D + S
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338
Query: 61 LING 64
LI+G
Sbjct: 339 LIDG 342
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA E M + G+ PD + C+AL+DGF D + M S G + ++++
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373
Query: 61 LING 64
LI+G
Sbjct: 374 LIHG 377
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + M+ G P++ T L++G+C RA ELL M + A S+
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443
Query: 61 LING 64
+ING
Sbjct: 444 MING 447
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G+NP+ + +++G C D A EL SMG KG + ++++I+ G
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAG 307
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV PD TC+A + G R A ++ + KG D F++S LI+G
Sbjct: 608 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 657
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++G+ PD T ++L+ GFC ++A EL M KG + F ++ L++G
Sbjct: 641 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 692
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L E M+ +G+NP+ +CN L++G C A E L M +G D +++
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639
Query: 61 LING 64
LING
Sbjct: 640 LING 643
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANG-LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA + E M+ G PD T N L+ G C AREL+ M KGC+ + +++
Sbjct: 369 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428
Query: 60 ILIN 63
ILI+
Sbjct: 429 ILID 432
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
MI RG+ PD T N+L++G C R A L + +G DA +++ LI+
Sbjct: 625 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L M+ RG D T N L+ C A ++ L M SKG + S +I
Sbjct: 545 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 604
Query: 61 LING 64
LING
Sbjct: 605 LING 608
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G++P T +M CL + D A LL M GC +A + LI+
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHA 261
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 8 AELMIQRGVNPDTSTCNALMDGFCLADRFDRARELL-VSMGSKGCKQDAFSHSILING 64
A +++ + NP+ N L++G+ R D A+ ++ SM S GC D F+++ LI G
Sbjct: 341 ARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 398
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M +G+ + N L+ C ++ A + M SKGCK D F+ +
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 61 LING 64
LI G
Sbjct: 500 LIFG 503
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L M +G P+ T L+D FC R + AR +L M KG +A ++ LI+
Sbjct: 408 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 467
Query: 64 G 64
Sbjct: 468 A 468
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+AN L + M+ +G+ P+ T L+DG C + R D A E+ M S+ D +++
Sbjct: 211 MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNT 270
Query: 61 LING 64
LI G
Sbjct: 271 LIYG 274
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M GV PD T + L++G C + D A EL M KG + + +
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 235
Query: 61 LING 64
LI+G
Sbjct: 236 LIDG 239
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M+ + ++PD T N L+ G C +A +L+ M KG K D +++
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305
Query: 61 LING 64
LI+G
Sbjct: 306 LIDG 309
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P + N LM+G+ D L +M + G + D +++S+LING
Sbjct: 155 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLING 204
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
MIQ + D AL+ G C R+ A ++L M S G K D +++++IN
Sbjct: 326 MIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIIN 378
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE+ + M+++G+ P T NAL+ G+C R + A E+L M S C+ + +++
Sbjct: 370 LDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNE 429
Query: 61 LINGGSAR 68
LI G S R
Sbjct: 430 LICGFSKR 437
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EAN + Q G++PD+ T +L+ G+C + + A ++ M +KGC+++ S++ +I
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291
Query: 63 NG 64
+G
Sbjct: 292 HG 293
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L +L+ + G+ PD T + +D C + R + A +L S+ KG K + ++ L
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535
Query: 62 ING 64
I+G
Sbjct: 536 IDG 538
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA L + ++G+ + AL+DG C A + D A LL M S+ C ++ +++
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569
Query: 61 LING 64
LI G
Sbjct: 570 LIYG 573
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M P++ST N+L+ G C + ++ +M G K +++I
Sbjct: 545 IDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTI 604
Query: 61 LI 62
LI
Sbjct: 605 LI 606
>gi|222624963|gb|EEE59095.1| hypothetical protein OsJ_10946 [Oryza sativa Japonica Group]
Length = 318
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G+ T +CN L+ GFC R D A + M KG + D +++ILI G
Sbjct: 196 MLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQG 249
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G+ E M+++G+ D T N L+ G C A R A ++ + S G + + +
Sbjct: 221 VDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTP 280
Query: 61 LIN 63
LI+
Sbjct: 281 LID 283
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ +G+ P+ +L+ +C A F+ AR++ M KG K+ S +I
Sbjct: 151 IDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNI 210
Query: 61 LING 64
L+ G
Sbjct: 211 LVTG 214
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L E M+ +G+NP+ +CN L++G C A E L M +G D +++
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657
Query: 61 LING 64
LING
Sbjct: 658 LING 661
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MDEANG-LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA + E M+ G PD T N L+ G C AREL+ M KGC+ + +++
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446
Query: 60 ILIN 63
ILI+
Sbjct: 447 ILID 450
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
MI RG+ PD T N+L++G C R A L + +G DA +++ LI+
Sbjct: 643 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 695
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L M+ RG D T N L+ C A ++ L M SKG + S +I
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622
Query: 61 LING 64
LING
Sbjct: 623 LING 626
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
M+ +G++P T +M CL + D A LL M GC +A + LI+ S
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALS 281
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 8 AELMIQRGVNPDTSTCNALMDGFCLADRFDRARELL-VSMGSKGCKQDAFSHSILING 64
A +++ + NP+ N L++G+ R D A+ ++ SM S GC D F+++ LI G
Sbjct: 359 ARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + + M +G+ + N L+ C ++ A + M SKGCK D F+ +
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 61 LING 64
LI G
Sbjct: 518 LIFG 521
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L M +G P+ T L+D FC R + AR +L M KG +A ++ LI+
Sbjct: 426 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 485
Query: 64 G 64
Sbjct: 486 A 486
>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 344
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + +M++ GV P+ T ++M+G+CL + ++ + + ++ G + S++I
Sbjct: 103 MKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNI 162
Query: 61 LING 64
+ING
Sbjct: 163 MING 166
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L MI ++PD +T N+L+ GFC+ + A L M K ++ +I
Sbjct: 33 VNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTI 92
Query: 61 LING 64
L++G
Sbjct: 93 LVDG 96
>gi|296088471|emb|CBI37462.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E L + MI GV PD ST +++G CLA + + A + L MG+KG + D +++
Sbjct: 463 EECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCF 522
Query: 62 IN 63
++
Sbjct: 523 LD 524
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA GL MI+ G P T N L+ F D A E M +GC +D ++ ++
Sbjct: 533 EEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVM 592
Query: 62 ING 64
I G
Sbjct: 593 IEG 595
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD---AFSHSILI 62
E MI+ G PD+ T N +D FC A A EL M +KG A +++I+I
Sbjct: 397 EEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMI 453
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M + G+NPD + CN ++D C +R A E+ M + C+ D +++ LI
Sbjct: 319 MWETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLI 370
>gi|147854551|emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]
Length = 381
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L LM ++G P+ A+++GFC A + D A + M + G +AFS+++
Sbjct: 226 VQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLDDAVRIFRKMQNNGISPNAFSYTV 285
Query: 61 LING 64
LI G
Sbjct: 286 LIRG 289
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M++ G+ PD ST NA++ R+++A +L M + CK D +S+S L
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529
Query: 62 ING 64
++
Sbjct: 530 LHA 532
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L M G+ PD T N + + F+ A EL+ M ++GCK + +++
Sbjct: 679 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Query: 61 LING 64
++ G
Sbjct: 739 IVEG 742
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M G PD T N+L+D + A R D A E++ M GC +++ LI
Sbjct: 261 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 320
Query: 63 N 63
+
Sbjct: 321 S 321
>gi|361067415|gb|AEW08019.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
Length = 101
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M+ G D N+L+DG C D ARE+ V M KG D F+++ LI
Sbjct: 8 EAAVLVNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQVVMVEKGVGPDVFTYTSLI 67
Query: 63 NG 64
G
Sbjct: 68 QG 69
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + +M+++GV PD T +L+ G C A D+A L+ M +KG ++ +++
Sbjct: 41 LDFAREMQVVMVEKGVGPDVFTYTSLIQGLCDAGLLDQALGLMEEMKAKGIAPNSVTYTT 100
Query: 61 L 61
L
Sbjct: 101 L 101
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ L M + GV P+ T N L+DG C R RA E M KG K +A +++ L
Sbjct: 410 DRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTAL 469
Query: 62 ING 64
I+
Sbjct: 470 ISA 472
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 3 EANGLA--ELMIQRGVN-PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
E +GL+ E M +N P+T T N L+DGF A FDRA EL M +G + + + +
Sbjct: 373 EEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLN 432
Query: 60 ILING 64
L++G
Sbjct: 433 TLVDG 437
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A+ + + G + D S N L+ GFC + +R ELL M G K D +++
Sbjct: 514 MNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNT 573
Query: 61 LIN 63
LI+
Sbjct: 574 LIS 576
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G+ + +T AL+ FC + +RA + M S GC DA + LI+G
Sbjct: 454 MKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISG 507
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M++ G+ PD ST NA++ R+++A +L M + CK D +S+S L
Sbjct: 452 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 511
Query: 62 ING 64
++
Sbjct: 512 LHA 514
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L M G+ PD T N + + F+ A EL+ M ++GCK + +++
Sbjct: 661 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 720
Query: 61 LING 64
++ G
Sbjct: 721 IVEG 724
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M G PD T N+L+D + A R D A E++ M GC +++ LI
Sbjct: 243 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 302
Query: 63 N 63
+
Sbjct: 303 S 303
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M++ G+ PD ST NA++ R+++A +L M + CK D +S+S L
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529
Query: 62 ING 64
++
Sbjct: 530 LHA 532
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA+ L M G+ PD T N + + F+ A EL+ M ++GCK + +++
Sbjct: 679 MKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNS 738
Query: 61 LING 64
++ G
Sbjct: 739 IVEG 742
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M G PD T N+L+D + A R D A E++ M GC +++ LI
Sbjct: 261 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 320
Query: 63 N 63
+
Sbjct: 321 S 321
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L + MI+ G+ PD NA++ G C DRA E + + +KG D S+SI
Sbjct: 41 VDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSI 100
Query: 61 LING 64
L+ G
Sbjct: 101 LLRG 104
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L ++M ++G+ PD + + L+ FC R D A E L SM S GC D +++
Sbjct: 146 VEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNT 205
Query: 61 LIN 63
+++
Sbjct: 206 ILS 208
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ M+ + ++PD T N+L+ C D+A ELLV M S + S++I++
Sbjct: 254 ALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLL 313
Query: 64 GGS 66
G S
Sbjct: 314 GLS 316
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A ++M+ RG PD T N L+ C + D A E+L + SKGC +++
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 61 LINGGS 66
+I+G S
Sbjct: 467 VIDGLS 472
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L + M +G PD T N L++G C R D A + L +M S GC+ + +H+I++
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 328
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ P+ T N++M G C + + DRA + L M SK CK +++ILI G
Sbjct: 526 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M G P++ + N L+ GFC + DRA E L M S+GC D +++ L+
Sbjct: 378 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 435
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA M G P+ T N ++ C R+ A +LL M KGC + +I
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 361
Query: 61 LIN 63
LIN
Sbjct: 362 LIN 364
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E M+ RG PD C +L+ GFC + +A ++ + G D ++++LI+G
Sbjct: 138 ESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISG 193
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + +Q+ PD T L++ C +A +LL M +KG K D ++++
Sbjct: 232 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 291
Query: 61 LING 64
LING
Sbjct: 292 LING 295
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + +G +P T N ++DG + +RA +LL M KG K D ++S
Sbjct: 442 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 501
Query: 61 LINGGS 66
L++G S
Sbjct: 502 LVSGLS 507
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E L + MI GV PD ST +++G CLA + + A + L MG+KG + D +++
Sbjct: 499 EECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCF 558
Query: 62 IN 63
++
Sbjct: 559 LD 560
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA GL MI+ G P T N L+ F D A E M +GC +D ++ ++
Sbjct: 569 EEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVM 628
Query: 62 ING 64
I G
Sbjct: 629 IEG 631
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQD---AFSHSILI 62
E MI+ G PD+ T N +D FC A A EL M +KG A +++I+I
Sbjct: 433 EEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMI 489
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M+ G+ P T N ++ G RF A+EL ++M + G + ++++I
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629
Query: 61 LINGGS 66
++NG S
Sbjct: 630 ILNGLS 635
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA+ L ++M+ G+ P+ T N L+ G+C R D A + M S G +++ +
Sbjct: 536 DEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595
Query: 62 ING 64
++G
Sbjct: 596 LHG 598
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L +LM + G PD + NAL+ G CL + D A +LL M S G K + +++ L+
Sbjct: 502 KAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLL 561
Query: 63 NG 64
+G
Sbjct: 562 HG 563
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +G+ P+ T ++DG C A DRA + M KG + + +++
Sbjct: 220 VDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTC 279
Query: 61 LING 64
LI+G
Sbjct: 280 LIHG 283
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS---KGCKQDAFSHSILING 64
M + G P+ + N L+ GFC +R + A ELL M + C + S++ +ING
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVING 213
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M G+ PD T L+D C + AR+L SM KG K D + I+++G + +
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATK 357
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A GL M +RGV PD T L+ G+C+ + D+A +L +M ++ + D +++ LI
Sbjct: 69 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 128
Query: 63 NG 64
+G
Sbjct: 129 DG 130
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M+ + + PD T N L+DG C D+A +L M S+ + ++SI
Sbjct: 102 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 161
Query: 61 LIN 63
LI+
Sbjct: 162 LID 164
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L +M + V PD T N L++GF + A + M +KG + D +++
Sbjct: 242 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 301
Query: 61 LING 64
+ING
Sbjct: 302 MING 305
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A G + MI +G+ P+ T N+++ G+C + + ++ L M D +++
Sbjct: 172 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 231
Query: 61 LING 64
LI+G
Sbjct: 232 LIHG 235
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + + M+ G PD T N L++G C R A LL M +G D + +
Sbjct: 32 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 91
Query: 61 LING 64
LI+G
Sbjct: 92 LIHG 95
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E ++Q+G+ P+T T N L+D A+ D A +M + C + ++SI
Sbjct: 707 IDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSI 766
Query: 61 LINGGSARIRK 71
++N G ++RK
Sbjct: 767 MVN-GLCKVRK 776
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G++ DT N ++DGFC + + ++A +LL M +KG + ++ +I+G
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDG 665
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG +PD N MD A ++ R L + ++G D S+SILI+G
Sbjct: 542 MMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + M + G+ P+ T N ++D C A R D A + + + K C D+ +
Sbjct: 427 LEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCS 486
Query: 61 LING 64
LI+G
Sbjct: 487 LIDG 490
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G+ T +CN L+ GFC R D A + M KG + D +++ILI G
Sbjct: 351 MLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQG 404
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G+ E M+++G+ D T N L+ G C A R A ++ + S G + + +
Sbjct: 376 VDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTP 435
Query: 61 LIN 63
LI+
Sbjct: 436 LID 438
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ +G+ P+ +L+ +C A F+ AR++ M KG K+ S +I
Sbjct: 306 IDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNI 365
Query: 61 LING 64
L+ G
Sbjct: 366 LVTG 369
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E ++ G+ P ST L+D C + D A ELL M +KG + A +
Sbjct: 411 LSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDS 470
Query: 61 LING 64
+ING
Sbjct: 471 IING 474
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ++ + PD NAL+ GFC A R D + E+ + M +KGC + +++I
Sbjct: 464 LDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTI 523
Query: 61 LING 64
L+ G
Sbjct: 524 LVEG 527
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGG 65
L E M G +T T N L+ G C+ +++ +LL + KG +AF++S L+
Sbjct: 156 LVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAA 214
>gi|255660978|gb|ACU25658.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 373
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G++P T + LM G CL +RA +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLDPGVITYSMLMXGLCLDHXVERALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK + ++
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E M +GV PD +CNA++ G+C A + +M GC D F+++
Sbjct: 1274 LGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 1333
Query: 61 LING 64
+I+G
Sbjct: 1334 VISG 1337
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M +R V PD + N L+ G C A+ +L M K + D F ++
Sbjct: 1204 VSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYAT 1263
Query: 61 LING 64
LI+G
Sbjct: 1264 LIDG 1267
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I+R +NP+ + L+ GFC+ A +LLV M +G D + LI+G
Sbjct: 1145 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHG 1197
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + E M+++ V PD L+DGF ++ AR++ M KG D S + +I
Sbjct: 1242 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIK 1301
Query: 64 G 64
G
Sbjct: 1302 G 1302
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + M + PDT T N L+DG C + + AR M GCK D ++++I
Sbjct: 356 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 415
Query: 61 LING 64
L++G
Sbjct: 416 LVSG 419
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L E + G P +T NAL++G C R + A +LL + GC D +++
Sbjct: 181 IQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 240
Query: 61 LING 64
LI+G
Sbjct: 241 LIDG 244
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG+ P+ +AL+ G C A + D A E+L M C D +++ILI+G
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 384
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+ + + M +G PD T + ++DG C A R A + SM ++G + +S
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 345
Query: 61 LING 64
LI+G
Sbjct: 346 LIHG 349
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M++ G PD T N L+ GFC A D A + M S C + ++
Sbjct: 391 VEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGT 450
Query: 61 LINGGSAR 68
LI+G R
Sbjct: 451 LISGLCKR 458
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A G+ + M +P+ T L+ G C + +A M +GC D+F +S L
Sbjct: 427 DAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSL 486
Query: 62 ING 64
++G
Sbjct: 487 VDG 489
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++M+ +GV PD T NAL++G C AR L+ M + G + D + + LI+G
Sbjct: 271 QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDG 326
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + L + M +G+ P+ T L+DG C + D A + M ++G + D +++
Sbjct: 228 LDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNA 287
Query: 61 LING 64
LING
Sbjct: 288 LING 291
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E L +M V PD T +AL++G C R D L M KG + + ++
Sbjct: 193 VEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTV 252
Query: 61 LING 64
LI+G
Sbjct: 253 LIDG 256
>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 376
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+++G+ P T + LM G CL + + A +L + KG K D H+ILI
Sbjct: 217 EAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + MIQ G P+T NAL++G A + + A + MG C ++SI
Sbjct: 145 LEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFPHCSPTIVTYSI 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE N + ELM + G D+ T L+ GFC +++ LL KG DA ++
Sbjct: 75 VDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIXERKGRXXDALAYXP 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
>gi|115465257|ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|222632454|gb|EEE64586.1| hypothetical protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + M +RGV P+ +T LM G C ADR A +L+ M +GC+ D ++ +L++
Sbjct: 218 AERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLMFDMEYRGCQADVVNYGVLMS 277
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ + M+ RGV P T N L+ C A L+ M +G +A ++++L+
Sbjct: 183 ARGVLDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMR 242
Query: 64 G 64
G
Sbjct: 243 G 243
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L M+Q G+ P+ T AL DG C + D A ELL M KG + + +++
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360
Query: 61 LING 64
++NG
Sbjct: 361 IVNG 364
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E M + G++PDT T LMD + +ARELL M +G + + ++L+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432
Query: 63 NG 64
NG
Sbjct: 433 NG 434
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L + M+++G+ P+ +T N++M +C+ + + E+ M ++G D+ +++I
Sbjct: 441 LEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNI 500
Query: 61 LING 64
LI G
Sbjct: 501 LIKG 504
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L M+ RG+ P T N LM+G C++ + + LL M KG +A +++
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNS 465
Query: 61 LI 62
++
Sbjct: 466 IM 467
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L MI++G PD T AL+DG+C +A L M G + +++ L
Sbjct: 268 EADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALA 327
Query: 63 NG 64
+G
Sbjct: 328 DG 329
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--GSAR 68
M++RGV PD L+DGFC A +L M ++ D+ + S LI G GS +
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGK 265
Query: 69 I 69
+
Sbjct: 266 V 266
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+ G P+ T N L+ G C A R D R L+ M S D F++SIL +G
Sbjct: 251 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 308
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L E M GV+ T N L+ G C + + D A EL+ ++ ++G + D S++ +
Sbjct: 526 EQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 585
Query: 62 ING 64
I+
Sbjct: 586 ISA 588
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
+A L M + GV+P T N L+D + A + ++ +L M KG K D S
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E++ + G+ PD T +++DG C + DRA E++ M KG + D F+ S LI G
Sbjct: 68 LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + M +GV PD T +AL+ G+C A + D A +L + + C+ DA S S
Sbjct: 97 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSA 156
Query: 61 LING 64
LI G
Sbjct: 157 LITG 160
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M DT + NAL+DG+C R + A++L M +K C D +++
Sbjct: 275 VDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTC 334
Query: 61 LING 64
L+ G
Sbjct: 335 LVRG 338
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L M +G P+ T L+ G C A + D AR L+ M + C D S++
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNA 299
Query: 61 LING 64
L++G
Sbjct: 300 LLDG 303
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + +M R P+ T ++L+ G C A D+A +L M SKGC + +++
Sbjct: 205 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 264
Query: 61 LING 64
LI+G
Sbjct: 265 LIHG 268
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS-KGCKQDAFSHS 59
++EA L + M + PD T L+ GFC A R + AR LL +M + G D ++S
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369
Query: 60 ILINGGS 66
I++ G S
Sbjct: 370 IVVAGYS 376
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + MI R V P+ T ++L+DG C A R + A E+L ++ K D +++I+I
Sbjct: 383 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVI 438
Query: 63 NG 64
G
Sbjct: 439 EG 440
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L E M+ + V P T N+++ C D A +LLV+M + G + +++ L
Sbjct: 448 EEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 507
Query: 62 INGGS 66
+ G S
Sbjct: 508 LEGFS 512
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD T AL+DGFC + ++A ++L M + C + ++S L++G
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHG 233
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M++ GV PD T +AL+DG C +F A L M G + ++
Sbjct: 273 MDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCT 332
Query: 61 LIN 63
LI+
Sbjct: 333 LID 335
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
M+ +G P ST N+LM F A ++A+EL M +G + ++ IL+NG S
Sbjct: 843 MVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWS 898
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ RG+ PDT T NAL+ G C + D A + M +G + + + L+ G
Sbjct: 738 MLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGG 791
>gi|218192883|gb|EEC75310.1| hypothetical protein OsI_11678 [Oryza sativa Indica Group]
Length = 473
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G+ T +CN L+ GFC R D A + M KG + D +++ILI G
Sbjct: 351 MLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQG 404
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G+ E M+++G+ D T N L+ G C A R A ++ + S G + + +
Sbjct: 376 VDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTP 435
Query: 61 LIN 63
LI+
Sbjct: 436 LID 438
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ +G+ P+ +L+ +C A F+ AR++ M KG K+ S +I
Sbjct: 306 IDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNI 365
Query: 61 LING 64
L+ G
Sbjct: 366 LVTG 369
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M+ ++PD T +L+DG C R + A ELL + +GC ++++
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 397
Query: 61 LING--GSARIRK 71
+++G S ++RK
Sbjct: 398 VVDGYCKSNQVRK 410
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D L E++ R V PD +T ++ CL DR D AREL+ M +G +A ++S L
Sbjct: 167 DAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 225
Query: 62 ING 64
++G
Sbjct: 226 VDG 228
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L E + +RG P T N ++DG+C +++ +A EL+ S+G + +++I
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432
Query: 61 LING 64
L+ G
Sbjct: 433 LVAG 436
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLV-SMGSKGCKQDAFSHS 59
+D+A L E M+ RG+ + T +AL+DG C +R D A LL+ + +G D ++S
Sbjct: 200 VDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYS 259
Query: 60 ILING 64
+I+G
Sbjct: 260 TVIDG 264
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ PD T LM FC R D A EL M + D + +
Sbjct: 303 MDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362
Query: 61 LING 64
L++G
Sbjct: 363 LVDG 366
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L G+N DT T LMD +C + D+A+E+L M KG + + ++
Sbjct: 930 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV 989
Query: 61 LING 64
L+NG
Sbjct: 990 LMNG 993
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MIQ G +P+ T L+DG C D A ELL M G + + F+++ ++NG
Sbjct: 870 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 923
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M+ +G+ P T N LM+GFCL + +LL M +KG +A + +
Sbjct: 965 MDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNC 1024
Query: 61 LI 62
L+
Sbjct: 1025 LV 1026
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L M+ RG+ PD T LM+G+C A A + M GC + +++
Sbjct: 825 MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884
Query: 61 LING 64
LI+G
Sbjct: 885 LIDG 888
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L LM +G PD + + +++G+C D+ +L+ M KG K +++++
Sbjct: 685 INEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGS 744
Query: 61 LI 62
+I
Sbjct: 745 II 746
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++ L M+ +G+ P+ +T N L+ +C+ + A + M S+G + D ++
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYEN 1059
Query: 61 LING 64
L+ G
Sbjct: 1060 LVKG 1063
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA MI +G+ PDT L+DGFC A + M S+ D +++
Sbjct: 755 LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814
Query: 61 LING 64
+I+G
Sbjct: 815 IISG 818
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A + + M RGV PD T L+ G C A A L M KG ++S+
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094
Query: 61 LING 64
LI G
Sbjct: 1095 LIKG 1098
>gi|255554390|ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542581|gb|EEF44120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 932
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +L+ G+ D L+DGFCL FDRA +L+ M KG +++I
Sbjct: 341 IDEAFAIFKLVENLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEMEKKGITPTIVAYNI 400
Query: 61 LIN 63
LIN
Sbjct: 401 LIN 403
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++++ G M+ G P+ T A++ GFC + D A + + + G K D F ++I
Sbjct: 306 VEKSVGFLHHMLANGSEPNLVTYTAIILGFCRKGKIDEAFAIFKLVENLGIKLDEFIYAI 365
Query: 61 LING 64
L++G
Sbjct: 366 LVDG 369
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ + + M Q+G+ P + N+L+ GF ADR + A EL M G + +++ +
Sbjct: 372 VDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVL 431
Query: 61 LIN 63
IN
Sbjct: 432 FIN 434
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M+ +G+NPD + L+ C A R + + + G + D ++++LI+G
Sbjct: 938 LFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHG 995
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ AN + E M G+ PD T L+DGFC D A E+ M +G D +++
Sbjct: 400 LKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTT 459
Query: 61 LINGGS 66
LI+G S
Sbjct: 460 LISGLS 465
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ AN L LM + GV PD T A M G C A R A E+ M +G + +
Sbjct: 295 LNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTT 354
Query: 61 LING 64
LI+
Sbjct: 355 LIDA 358
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E M +RGVNP+T L+D C EL M ++G K D +++
Sbjct: 330 IQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNA 389
Query: 61 LING 64
L NG
Sbjct: 390 LANG 393
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++RGV P T N LM G C A + A L M G D +++ + G
Sbjct: 270 MLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQG 323
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G+ PD +T ++D FC +LL M +KG K ++++++NG
Sbjct: 480 MMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNG 533
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M +G P T N +M+GFC+ + A LL +M + G D +++IL++G
Sbjct: 511 LLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDG 568
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG+ D NAL +G C A +++ M + G K D +++ LI+G
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDG 428
>gi|255541714|ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549101|gb|EEF50590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 248
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + + G PD N L+ GFC +R D+ARE+L M G + D +++
Sbjct: 26 MDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAREMLNDMEEAGLEPDTITYNT 85
Query: 61 LIN 63
LI+
Sbjct: 86 LIS 88
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA + M +RG D CN L++GF A + + A M KGC S++
Sbjct: 447 MDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNT 506
Query: 61 LING 64
LI G
Sbjct: 507 LIKG 510
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M+++ PD TC+ LMDG C + + A L KG K D ++IL+
Sbjct: 519 EAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILM 578
Query: 63 NG 64
+G
Sbjct: 579 HG 580
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + EL+ ++G P+++T L+ G C R ++A ++ K DA+++S
Sbjct: 377 VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSS 436
Query: 61 LING 64
+++G
Sbjct: 437 MVDG 440
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + +++ + D T NA+++GFC A + + EL + MG + C Q S++I
Sbjct: 308 IDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNI 366
Query: 61 LING 64
LI G
Sbjct: 367 LIKG 370
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
V P+ T N +++G C RFD + E+ M ++D F++S LI+G
Sbjct: 253 VYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHG 301
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + V+P+ T N L+ C + ++A LL M S+ K D FS+ L
Sbjct: 133 DRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTL 192
Query: 62 ING 64
ING
Sbjct: 193 ING 195
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G +P + N L+ G C A+RF A + M K K D + S+L++G
Sbjct: 495 KGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDG 545
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G+ P T T N L+ C + D AREL M KGCK + F+ IL+ G
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG 191
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + LM + GV PD T L+ G+C + D A+ LL M C +A++ +I
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 61 LIN 63
L++
Sbjct: 437 LLH 439
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M++ P+ TCN L+ R A ELL M KG D + +I
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 61 LING--GSARIRK 71
+++G GS + K
Sbjct: 472 IVDGLCGSGELDK 484
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 23/87 (26%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG---------- 50
+ EA L M ++G DT TCN ++DG C + D+A E++ M G
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 51 -------------CKQDAFSHSILING 64
C D ++S L+NG
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNG 533
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+I+ PD T + L++G C A RF A+ L M + + D+ +++I I+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E +GL + M ++G++P+ T N + C ++ + A LL M K + FS LI
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M +G+ P + N LMDG C A+ ++ M G DA ++ L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 63 NG 64
+G
Sbjct: 404 HG 405
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M Q+G+ P+ + N+L+ GF ADRF A EL M G K + ++H + I
Sbjct: 432 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFI 491
Query: 63 N 63
N
Sbjct: 492 N 492
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M GV P+ + + A RFD A +L M ++GCK D +H++LI
Sbjct: 300 MEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLI 351
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L ++ +G +P T L+DG A R + A L M GCK + ++I
Sbjct: 920 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 979
Query: 61 LING 64
L+NG
Sbjct: 980 LLNG 983
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M +G+ P+ NAL+DG C + RAR+L M KG + D+ ++S
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 435
Query: 61 LING 64
+I+G
Sbjct: 436 MIDG 439
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A L + M ++G+ PD+ T + ++DG+C ++ A L M SKG + +F ++
Sbjct: 411 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 470
Query: 61 LING 64
L++G
Sbjct: 471 LVHG 474
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + ++M+ G+ + T N L+ G C + ++A E+L M + GCK ++ + +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 61 LING 64
LI G
Sbjct: 121 LIEG 124
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + + MI G P++ T L++G+C RA ELL M + A S+
Sbjct: 96 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 155
Query: 61 LING 64
+ING
Sbjct: 156 MING 159
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA E M + G+ PD + C+AL+DGF D + M S G + ++++
Sbjct: 26 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 85
Query: 61 LING 64
LI+G
Sbjct: 86 LIHG 89
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV PD TC+A + G R A ++ + KG D F++S LI+G
Sbjct: 320 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++G+ PD T ++L+ GFC ++A EL M KG + F ++ L++G
Sbjct: 353 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 404
>gi|255564122|ref|XP_002523058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537620|gb|EEF39243.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 286
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M RG NPD+ T L++G C + A+EL + M +K C ++S
Sbjct: 172 IDAAFRIFNEMPNRGCNPDSYTYGTLINGLCRFGKIWEAKELFIEMETKCCSPSVVTYSC 231
Query: 61 LING 64
LI+G
Sbjct: 232 LIHG 235
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + M+Q+ V P+ T AL DG C A ELL M SKG + + F+++
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 61 LING 64
LING
Sbjct: 501 LING 504
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ L + M+ +G+ P T N LM+GFC++ R + + LL M K + +++
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 61 LI 62
L+
Sbjct: 606 LM 607
Score = 40.8 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG+ D T AL++G C A A +L M KG DA ++++LI+G
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G+ PD T ++ C + DRA LL M KG K ++++L+NG
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
AN L M +G+ + T N+L++G C A ++A ++ M G K D ++++ +I
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+++ ++P+T+T N+LM +C+ E+ M S+ + +++ILI G
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E M+ GV D + +M GFC AR M +G D +++
Sbjct: 336 VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Query: 61 LING 64
LING
Sbjct: 396 LING 399
>gi|255660988|gb|ACU25663.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 376
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + ++ +G+NP T + L G CL + ++A +L + SKG K D H+ILI
Sbjct: 217 EAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILI 276
Query: 63 NG 64
+G
Sbjct: 277 HG 278
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D++ + E+ Q+G D +A+++G C DRA +L M GCK +A ++
Sbjct: 110 IDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNT 169
Query: 61 LING 64
LING
Sbjct: 170 LING 173
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + MI+ G P+ N L++G A +F+ A + MG+ C +++
Sbjct: 145 LDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204
Query: 61 LING 64
LING
Sbjct: 205 LING 208
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E + ELM + G D+ T L+ GFC D++ +L KG DAF++S
Sbjct: 75 VEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSA 134
Query: 61 LING 64
+ING
Sbjct: 135 MING 138
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E I+RG+ P+ T L+ G+C + +A + L+ M + G + D S+
Sbjct: 364 VEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGA 423
Query: 61 LING 64
LI+G
Sbjct: 424 LIHG 427
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + M+ RG+ PD + N LM+G + A+ +L M + DAF ++
Sbjct: 434 VDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYAT 493
Query: 61 LING 64
L++G
Sbjct: 494 LVDG 497
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 10 LMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
LM+++ P+ T +L++G+C A +L M S G K ++SILI
Sbjct: 583 LMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILI 635
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L +L+I++G++P N ++ GF + D A + M D F+ S
Sbjct: 504 LDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFST 563
Query: 61 LING 64
+I+G
Sbjct: 564 IIDG 567
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L E M+ RGVNPDT N L+ G C+ +A EL M +G K + +++
Sbjct: 728 LKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNS 787
Query: 61 LING 64
LI+G
Sbjct: 788 LIHG 791
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EAN L M++ V P+ T N L++G C RA ELL M KG D +++
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRP 570
Query: 61 LING 64
LI+G
Sbjct: 571 LISG 574
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +G+ P+ T + L+D FC + D A L M G K + +S
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 61 LING 64
LI+G
Sbjct: 431 LISG 434
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS--------KGCKQDAFSH 58
L + M+++G+ PDT T L+ G C R ARE + + +GC + ++
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTY 611
Query: 59 SILING 64
+ LING
Sbjct: 612 TALING 617
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + ++ G+ PD A++ C F RARE++ M S GC ++++ I G
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRG 259
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
GV P NAL++ C + D A L +MG KG + ++SILI+ R
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKR 403
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +G++P+T T AL+ G C A+R A +L M + ++++LI G
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+++G PD+ NAL+D + D A L M GC Q ++++I
Sbjct: 440 VDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTI 499
Query: 61 LING 64
LI G
Sbjct: 500 LITG 503
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGC-KQDAFSHSI 60
+EA L +LMI +G+ P + AL G CL+ + RA ++L M G + AF I
Sbjct: 511 EEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMI 570
Query: 61 LINGGSARIRK 71
I + RI++
Sbjct: 571 NILCKAGRIKE 581
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA L + M + G+ PD T +++ C + R D A E + KG +A +S
Sbjct: 370 MGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSS 429
Query: 61 LING 64
LI+G
Sbjct: 430 LIDG 433
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E +GV + ++L+DG + R D A + M KGC D++ ++
Sbjct: 405 LDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNA 464
Query: 61 LING 64
LI+
Sbjct: 465 LIDA 468
>gi|356498877|ref|XP_003518274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide
repeat-containing protein At1g09900-like [Glycine max]
Length = 395
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+Q PD TC L+D C +A +LL+ M SKGCK + ++++LI G
Sbjct: 23 LQSKCYPDVVTCTELIDAACKESGVGQAMKLLIEMMSKGCKPNVVTYNVLIKG 75
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E+M + G P+ + N L++GFC DR E M S+GC D +++I
Sbjct: 152 LGKALNVLEMMPKHGCTPNFRSYNPLIEGFCNEKSADRTIEYSRIMVSRGCYLDTVTYNI 211
Query: 61 LING 64
L+
Sbjct: 212 LLTA 215
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M+ +G P+ T N L+ G C R D A L ++ S + D S++I+++
Sbjct: 57 MMSKGCKPNVVTYNVLIKGICNEGRLDEAIRFLKNLPSYSIQLDVISYTIILH 109
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD LA M++ G +P+ T N L++ CL +A +L M GC + S++
Sbjct: 118 MDAMKLLAS-MLRNGFSPNVVTFNTLINFLCLKGLLGKALNVLEMMPKHGCTPNFRSYNP 176
Query: 61 LING 64
LI G
Sbjct: 177 LIEG 180
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA G+ + M+ G+ P TST N + C R D ARELL SM + D S++ L
Sbjct: 361 DEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAP----DVVSYNTL 416
Query: 62 ING 64
++G
Sbjct: 417 MHG 419
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + M +RGV P+ T NAL+ G C A D A L M +G + +S++I
Sbjct: 637 LEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTI 696
Query: 61 LIN 63
LI+
Sbjct: 697 LIS 699
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA + M RG+ PD + N+ MD C R A E+ SM +KG + + ++ IL
Sbjct: 203 EEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGIL 262
Query: 62 ING 64
++G
Sbjct: 263 LHG 265
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A + + MI G+ PDT T N L++G+ + R D L M K K +++I
Sbjct: 448 MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI 507
Query: 61 LING 64
+++G
Sbjct: 508 ILDG 511
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ + +L+ G D N L+DG+CL +A +L +M S G D F+++ L+
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLV 474
Query: 63 NG 64
NG
Sbjct: 475 NG 476
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+Q+G PD T N++++ C A D A LL M G + +++ +I
Sbjct: 134 KACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMI 193
Query: 63 NGGSA 67
+G S
Sbjct: 194 HGYST 198
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
L E+M+ +G+ PDT T N ++DG C A+ L M S G + D +++ LI+
Sbjct: 505 LREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHC 564
Query: 67 AR 68
R
Sbjct: 565 ER 566
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
G+ P T N L+DG+C AR L M +GC D +++IL+N GS ++R
Sbjct: 408 GLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMN-GSRKVR 462
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L E M+++G PD T LM+G ARE M SKG + D F+++
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 61 LI 62
I
Sbjct: 489 RI 490
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EA + M+Q+ V P+ T AL DG C A ELL M SKG + + F+++
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500
Query: 61 LING 64
LING
Sbjct: 501 LING 504
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A+ L + M+ +G+ P T N LM+GFC++ R + + LL M K + +++
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 61 LI 62
L+
Sbjct: 606 LM 607
Score = 40.8 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG+ D T AL++G C A A +L M KG DA ++++LI+G
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G+ PD T ++ C + DRA LL M KG K ++++L+NG
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
AN L M +G+ + T N+L++G C A ++A ++ M G K D ++++ +I
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L E M+++ ++P+T+T N+LM +C+ E+ M S+ + +++ILI G
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E M+ GV D + +M GFC AR M +G D +++
Sbjct: 336 VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Query: 61 LING 64
LING
Sbjct: 396 LING 399
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 35/70 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M V PD N L+ GF RF+ A EL M +GC +A S++
Sbjct: 199 LDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTT 258
Query: 61 LINGGSARIR 70
L+ G AR R
Sbjct: 259 LMQGLGARGR 268
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A LA M +RG P+ + LM G R D A + V M KGC D+ ++ L
Sbjct: 235 EDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTL 294
Query: 62 ING 64
+
Sbjct: 295 VTA 297
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDA 55
+DEA + M ++G PD+ T L+ FC A R + E L M +G + DA
Sbjct: 269 VDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDA 323
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 35/70 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M V PD N L+ GF RF+ A EL M +GC +A S++
Sbjct: 211 LDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTT 270
Query: 61 LINGGSARIR 70
L+ G AR R
Sbjct: 271 LMQGLGARGR 280
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A LA M +RG P+ + LM G R D A + V M KGC D+ ++ L
Sbjct: 247 EDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTL 306
Query: 62 ING 64
+
Sbjct: 307 VTA 309
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDA 55
+DEA + M ++G PD+ T L+ FC A R + E L M +G + DA
Sbjct: 281 VDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDA 335
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 35/70 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M V PD N L+ GF RF+ A EL M +GC +A S++
Sbjct: 211 LDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTT 270
Query: 61 LINGGSARIR 70
L+ G AR R
Sbjct: 271 LMQGLGARGR 280
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A LA M +RG P+ + LM G R D A + V M KGC D+ ++ L
Sbjct: 247 EDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTL 306
Query: 62 ING 64
+
Sbjct: 307 VTA 309
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDA 55
+DEA + M ++G PD+ T L+ FC A R + E L M +G + DA
Sbjct: 281 VDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDA 335
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A GL E M + V P T N+L+ G C A R + AR +L + G D F++SI
Sbjct: 152 VDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSI 211
Query: 61 LING 64
+ +G
Sbjct: 212 IFDG 215
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E M RG+ P+ N+++D FC D+A E + M KG +++I
Sbjct: 293 MDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNI 352
Query: 61 LING 64
LI+G
Sbjct: 353 LIDG 356
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M+ GV PD T N+L+ G + ++L+ M +KG +A ++S+
Sbjct: 572 VQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSL 631
Query: 61 LING 64
LI G
Sbjct: 632 LIQG 635
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + M+ +G+ P T N L+DG+ F R ++L M G K + S+
Sbjct: 328 IDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGS 387
Query: 61 LIN 63
LIN
Sbjct: 388 LIN 390
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I +GV D TC+ L++G C + ++A E+L S+ G ++ ++NG
Sbjct: 234 IGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + M + PDT T N L+DG C + + AR M GCK D ++++I
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236
Query: 61 LING 64
LI+G
Sbjct: 237 LISG 240
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E + G P +T NAL++G C R + A +LL + GC D +++
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 61 LING 64
LI+G
Sbjct: 62 LIDG 65
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E + G P +T NAL++G C R + A +LL + GC D +++
Sbjct: 283 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 342
Query: 61 LING 64
LI+G
Sbjct: 343 LIDG 346
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A + M + PDT T N L+DG C + + AR M GCK D ++++I
Sbjct: 458 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 517
Query: 61 LING 64
LI+G
Sbjct: 518 LISG 521
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG+ P+ +AL+ G C A + D A E+L M C D +++ILI+G
Sbjct: 433 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 486
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M RG+ P+ +AL+ G C A + D A E+L M C D ++++LI+G
Sbjct: 152 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDG 205
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M++ G PD T N L+ GFC A D A + M S C + ++
Sbjct: 493 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGA 552
Query: 61 LINGGSAR 68
LI+G R
Sbjct: 553 LISGLCKR 560
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MDEANGLAELMIQRG-VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHS 59
M EA L M+ +G PD T A+++GFC D+A++LL M + G K + S++
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493
Query: 60 ILING 64
L+NG
Sbjct: 494 ALLNG 498
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A E M G+ P+ T N ++ G+C R + A ELL M SKGC D S+
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 61 LI 62
++
Sbjct: 353 IM 354
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A ++M Q+G+ P+ N +M C D AR + M KG + + F++SI
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 61 LING 64
LI+G
Sbjct: 525 LIDG 528
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G +P+ T +L++GFC ++R D A E+ M S K D ++ LI+G
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDG 669
>gi|125579821|gb|EAZ20967.1| hypothetical protein OsJ_36620 [Oryza sativa Japonica Group]
Length = 408
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + E M +GV PD +CNA++ G+C A + +M GC D F+++
Sbjct: 201 LGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 260
Query: 61 LING 64
+I+G
Sbjct: 261 VISG 264
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + E M +R V PD + N L+ G C A+ +L M K + D F ++
Sbjct: 131 VSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYAT 190
Query: 61 LING 64
LI+G
Sbjct: 191 LIDG 194
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I+R +NP+ + L+ GFC+ A +LLV M +G D + LI+G
Sbjct: 72 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHG 124
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ A + E M+++ V PD L+DGF ++ AR++ M KG D S +
Sbjct: 166 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNA 225
Query: 61 LING 64
+I G
Sbjct: 226 MIKG 229
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L E M++ G PD T +++GFC D A LL +M S GCK + S++I
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411
Query: 61 LING 64
++ G
Sbjct: 412 VLKG 415
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
AN + M G+ P+ N ++ G C ADR+++A ELL M K C D + +IL++
Sbjct: 285 ANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVD 344
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MIQ+G P+ T N +++ C ++A ELL M GC D S+S +I
Sbjct: 424 DAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVI 483
Query: 63 NG 64
+G
Sbjct: 484 DG 485
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L M Q+ D T N L+D FC DR ELL M GC D +++ +
Sbjct: 318 EKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 377
Query: 62 ING 64
ING
Sbjct: 378 ING 380
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M G P+T + ++ G C +R+ A EL+ M +GC + + +
Sbjct: 387 IDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNT 446
Query: 61 LIN 63
+IN
Sbjct: 447 IIN 449
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E M G+ PD T N++++G C A + E M KGC+ +A +++I
Sbjct: 471 LDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 530
Query: 61 LI 62
LI
Sbjct: 531 LI 532
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E N E MI +G P+ T N L++ FC ++ + A ++V M G DA S + LI
Sbjct: 508 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLI 567
Query: 63 NG 64
+G
Sbjct: 568 HG 569
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+G+ M Q G+ PD + N L+ GFC D A L + KG A + +I
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600
Query: 61 LINGGSARI 69
LI S+++
Sbjct: 601 LIGAYSSKL 609
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E M V PD T N LM G C + A + L M ++GC D F+++
Sbjct: 262 LEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNT 320
Query: 61 LING 64
+I+G
Sbjct: 321 IIDG 324
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
I +G PD T N L+DG+C + D A +L+ M + G D +++ ++NG
Sbjct: 447 IVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ +G PD T N ++DG+C + A ELL KG D ++ LING
Sbjct: 306 MMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLING 359
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + M+ GV PD T + FCL R A LL S+ +GC ++ +
Sbjct: 123 DQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTV 182
Query: 62 ING 64
+ G
Sbjct: 183 VRG 185
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
MI +G PD T L+DG C A DRA L M SKG
Sbjct: 621 MISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKG 660
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A GL + MI++G P+ T LM+G C + A+++L M +GCK + +
Sbjct: 236 LGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGV 295
Query: 61 LIN 63
L+N
Sbjct: 296 LMN 298
>gi|115482834|ref|NP_001065010.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|31432949|gb|AAP54520.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|62733610|gb|AAX95727.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639619|dbj|BAF26924.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|125575336|gb|EAZ16620.1| hypothetical protein OsJ_32092 [Oryza sativa Japonica Group]
Length = 507
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + M+ RG P+ T N+++ G C+ FD+A LL M S+GC + +S L
Sbjct: 409 DEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFTVYSTL 468
Query: 62 IN 63
++
Sbjct: 469 VS 470
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L + M+++G P+ ++ ++ FC ++ D A + V M GC+ D +++
Sbjct: 296 MTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTA 355
Query: 61 LING 64
LI+G
Sbjct: 356 LISG 359
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + M + G PD N L+ + +A + A +LL M KGC+ +A S++I+I
Sbjct: 263 EAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMI 322
Query: 63 NG 64
Sbjct: 323 QA 324
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG P T L++ C + F +A E+L M +KGC + +++++I
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 253
Query: 63 NG 64
NG
Sbjct: 254 NG 255
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M + G + T NAL++GFC+ R D A EL SM CK + +++
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTT 493
Query: 61 LING 64
L+ G
Sbjct: 494 LLTG 497
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + E M G +T+ CN +++ C R D A + L +MGS GC D S++
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391
Query: 61 LING 64
++ G
Sbjct: 392 VLKG 395
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M +G P+ T N +++G C R D ARE L + S G + D S++ ++ G A R
Sbjct: 237 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 296
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L E M++ G P+ T N L+DG + A ELL + S G D ++S
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598
Query: 61 LI 62
+I
Sbjct: 599 II 600
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
EL P+T T L+ G C A+R D A ELL M K C + + ++L++
Sbjct: 477 ELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 531
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M+Q+ P+ T N L+ FC D A EL+ M GC + +++
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 563
Query: 61 LING 64
L++G
Sbjct: 564 LLDG 567
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A M G +PDT + ++ G C A+R++ A+ELL M K C + + +
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426
Query: 61 LI 62
I
Sbjct: 427 FI 428
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + G PDT + ++ G C A R++ EL M K C + + +
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 321
Query: 61 LI 62
L+
Sbjct: 322 LV 323
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + + P+ T +L+D C +RA LL M G + D +S++I
Sbjct: 592 VDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTI 651
Query: 61 LING 64
L++G
Sbjct: 652 LLDG 655
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L E M + + PD T +L+DG C +RA L M +G + D +S++I
Sbjct: 359 VDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418
Query: 61 LING 64
L++
Sbjct: 419 LLDA 422
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M ++G+ PD + L+D C R + A+E + KG + ++++
Sbjct: 394 LERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNV 453
Query: 61 LING 64
+ING
Sbjct: 454 MING 457
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + ++ +G + + T N +++G C AD F A +L M KGC DA +
Sbjct: 429 LENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKT 488
Query: 61 LI 62
+I
Sbjct: 489 II 490
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + +M + + PD T LMDG+ L + A+ + SM G + ++I
Sbjct: 522 LKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTI 581
Query: 61 LING 64
+I+G
Sbjct: 582 MIDG 585
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L MI +G++P+ T NAL+ GFC+ A LL M K D + +
Sbjct: 219 LGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNT 278
Query: 61 LING 64
LI+
Sbjct: 279 LIDA 282
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A + +M++ + PD T N+L+DG+ ++ A+ + SM G + +++
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTT 348
Query: 61 LING 64
+I+G
Sbjct: 349 MIDG 352
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q GV P+ T ++DG C D A L M K D +++ LI+G
Sbjct: 334 MAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDG 387
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M + G+ PD + L+DG C + R + A+E+ + KG + ++
Sbjct: 627 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTA 686
Query: 61 LIN 63
+IN
Sbjct: 687 MIN 689
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + ++ +G + + A+++ C A FD A +L M KGC DA + I
Sbjct: 662 LEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDI 721
Query: 61 LI 62
+I
Sbjct: 722 II 723
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA+ L + M G P+ +AL+DGFC + + A+E+ V M +G + +++S
Sbjct: 625 VEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSS 684
Query: 61 LIN 63
LIN
Sbjct: 685 LIN 687
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DG C A+R + A ELL +M GC+ + + LI+G
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDG 653
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+EA L M + G P+ T A++DGF + ++ EL M SKGC + ++ +L
Sbjct: 731 EEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVL 790
Query: 62 IN 63
IN
Sbjct: 791 IN 792
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+AN L E+M+ G P+ T AL+DG C A + D+A ++ M
Sbjct: 541 DANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G++PD + NAL++GFC R A L M ++G D ++ ++I G
Sbjct: 421 MVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGG 474
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + M + G PD T N ++ FC D A++LL M G + D +S++
Sbjct: 236 IDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQ 295
Query: 61 LING 64
L+ G
Sbjct: 296 LLKG 299
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+ ++M V T NAL+ GFC A R D+A+ + M GC+ D ++++ +N
Sbjct: 207 IIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLN 263
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVS-MGSKGCKQDAFSHSILING 64
MI +G +PD C A++ G C + D A EL++ M S K ++ LI+G
Sbjct: 175 MIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISG 229
>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
Length = 484
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + ++M++ + D NA+ DGFC R D A E+L +M + CK +++
Sbjct: 199 LEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNC 258
Query: 61 LING 64
+ING
Sbjct: 259 IING 262
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFC-LADRFDRARELLVSMGSKGCKQDAFSHS 59
+DEA + + MIQR P T N +++G C +R + A L M C +A ++
Sbjct: 234 VDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYG 293
Query: 60 ILINGGS 66
+I G S
Sbjct: 294 TMILGLS 300
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M R V P+ T N ++ G C RFD A ++ M C + + +
Sbjct: 377 VDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKV 436
Query: 61 LING 64
+ G
Sbjct: 437 MTMG 440
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A + + MI+ G+ PD ST NA++ R+ +A +L M + CK D S+S L
Sbjct: 483 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSL 542
Query: 62 ING 64
++
Sbjct: 543 LHA 545
>gi|383156806|gb|AFG60696.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156807|gb|AFG60697.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156808|gb|AFG60698.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156809|gb|AFG60699.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156810|gb|AFG60700.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156811|gb|AFG60701.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156812|gb|AFG60702.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156813|gb|AFG60703.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156814|gb|AFG60704.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156815|gb|AFG60705.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156816|gb|AFG60706.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
gi|383156817|gb|AFG60707.1| Pinus taeda anonymous locus 0_17143_02 genomic sequence
Length = 101
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L M+ G D N+L+DG C D ARE+ V M KG D F+++ LI
Sbjct: 8 EAAVLVNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQVLMVEKGVGPDVFTYTSLI 67
Query: 63 NG 64
G
Sbjct: 68 QG 69
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + LM+++GV PD T +L+ G C A D+A L+ M +KG ++ +++
Sbjct: 41 LDFAREMQVLMVEKGVGPDVFTYTSLIQGLCDAGLLDQALGLMEEMKAKGIAPNSVTYTT 100
Query: 61 L 61
L
Sbjct: 101 L 101
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,021,297,974
Number of Sequences: 23463169
Number of extensions: 30126993
Number of successful extensions: 88761
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2986
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 65859
Number of HSP's gapped (non-prelim): 22913
length of query: 71
length of database: 8,064,228,071
effective HSP length: 43
effective length of query: 28
effective length of database: 7,055,311,804
effective search space: 197548730512
effective search space used: 197548730512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)