BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042276
(71 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MIQR ++P+ T N+L++GFC+ DR D A+++ M SK C D +++ LI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 63 NG 64
NG
Sbjct: 388 NG 389
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + LM+ + PD T N L++GFC A + EL M +G + +++
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 61 LING 64
LI+G
Sbjct: 421 LIHG 424
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PDT T L+ G ++ A L+ M KGC+ D ++
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 61 LINGGSAR 68
+ING R
Sbjct: 211 VINGLCKR 218
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T N+L++GFC +R A L+ M G + D + + L++G
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + PD T N + +G C A + + +L S+ KG K D +++
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 61 LING 64
+I+G
Sbjct: 526 MISG 529
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV+P+ T N L+DG C + ++A + + + D ++++I+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 62 ING 64
G
Sbjct: 492 SEG 494
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M+ +G PD T A+++G C D A LL M + D +S +I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 63 N 63
+
Sbjct: 248 D 248
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+GV PD N ++ GFC + A L + M G D+ +++ LI
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L M + + D + ++D C D A L M +KG + D F++S L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 62 IN 63
I+
Sbjct: 282 IS 283
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MIQRG++PDT T +L+DGFC ++ D+A +L M SKGC + + +ILI
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 63 NG 64
NG
Sbjct: 395 NG 396
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN + +LM+ +G P+ T N L++G+C A+ D EL M +G D +++
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 61 LING 64
LI G
Sbjct: 428 LIQG 431
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RGV DT T N L+ GFC + + A+EL M S+ + D S+ I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 61 LING 64
L++G
Sbjct: 463 LLDG 466
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G PDT T + L++G CL R A EL+ M G K + + L+NG
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
L + M++ G P+ T ++ C + + A ELL M + K DA +SI+I+G
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M +G D L+ GFC A R+D +LL M + D + S
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 61 LIN 63
LI+
Sbjct: 323 LID 325
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M+ R V PD + L+DG C ++A E+ + + D ++I
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 61 LING 64
+I+G
Sbjct: 498 IIHG 501
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+ EA L + M++ G P T NAL++G CL + A L+ M G + + ++
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +GV PD T N ++ G C A L M G + +++I
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 61 LI 62
LI
Sbjct: 568 LI 569
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L + M+QRG+ P+T T N+L+DGFC +R + A +++ M SKGC D + +ILI
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 63 NG 64
NG
Sbjct: 411 NG 412
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA + +LMI +G +PD T N L++G+C A+R D EL M +G + +++
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 61 LING 64
L+ G
Sbjct: 444 LVQG 447
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RGV +T T N L+ GFC + + + A++L M S+ + D S+ I
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 61 LING 64
L++G
Sbjct: 479 LLDG 482
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT N L++G CL R A EL+ M G K + + L+NG
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G P+ T +++ C + + A ELL M + K DA +SI
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 61 LING 64
+I+G
Sbjct: 269 IIDG 272
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M +G D T N L+ GFC A R+D +LL M + + + S+
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 61 LIN 63
LI+
Sbjct: 339 LID 341
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M+ R V PD + L+DG C ++A E+ + + D + I
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 61 LING 64
+I+G
Sbjct: 514 IIHG 517
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E MIQR ++PDT T N L++GFC+ +R D A+++ M SK C + +++ LI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 63 NG 64
NG
Sbjct: 406 NG 407
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ D ++
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 61 LINGGSAR 68
++NG R
Sbjct: 229 VVNGLCKR 236
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M+ + P+ T N L++GFC R + EL M +G + +++
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 61 LING 64
+I G
Sbjct: 439 IIQG 442
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++G+C + R A L+ M G K D F+ + LI+G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L M+++ +NP+ T NAL+D F + A +L M + D ++++LI
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 63 NG 64
NG
Sbjct: 371 NG 372
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG PD T +++G C D A LL M + K + + +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 63 NG 64
+
Sbjct: 266 DS 267
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ +T T ++ GF A D A+ + M S D ++SIL++G
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T N+L++GFC+ DR D+A+++ M SK C D +++ LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 63 NG 64
G
Sbjct: 408 KG 409
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M+ + PD T N L+ GFC + R + EL M +G D +++
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 61 LING 64
LI G
Sbjct: 441 LIQG 444
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI++ +NP+ T NAL+D F +F A +L M + D F+++ L+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 63 NG 64
NG
Sbjct: 373 NG 374
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ + ++ +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 61 LINGGSAR 68
++NG R
Sbjct: 231 VVNGLCKR 238
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A E+ M K D + ++ +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 62 ING 64
I G
Sbjct: 512 IEG 514
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T ++L++G+C R A L+ M G + D + + LI+G
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG P+ T +++G C D A LL M + + D + +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 63 N 63
+
Sbjct: 268 D 268
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M + + D +++G C A + D +L S+ KG K + +++
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 61 LING 64
+I+G
Sbjct: 546 MISG 549
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M +G+ P+ T ++L+ C R+ A +LL M K + + +
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 61 LING 64
LI+
Sbjct: 336 LIDA 339
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L MI RG+ PDT T N+L+DGFC + A ++ M SKGC+ D ++SILI
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 63 N 63
N
Sbjct: 393 N 393
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM+ +G PD T + L++ +C A R D L + SKG + +++
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 61 LING 64
L+ G
Sbjct: 426 LVLG 429
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+G+ P+T T N L+ GFC + + + A+EL M S+G ++ IL++G
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +GV PD T N ++ G C A L M GC D F+++I
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 61 LIN---GGSARI 69
LI GGS I
Sbjct: 566 LIRAHLGGSGLI 577
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ + MI R + PD T +AL+D F + A+EL M ++G D +++ L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 62 ING 64
I+G
Sbjct: 357 IDG 359
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G PDT T + L++GFCL R A L+ M + D + S LING
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ PD T + L++G CL R A L+ M G + D ++
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 61 LIN 63
++N
Sbjct: 216 VLN 218
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N ++ G C A + D A L S+ KG K D +++++I G
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M+ RGV P T L+DG C ++A E+ M ++I
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 61 LING 64
+I+G
Sbjct: 496 IIHG 499
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A L M +G+ D T ++L+ G C ++D ++L M + D + S L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 62 IN 63
I+
Sbjct: 322 ID 323
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L ELM++ GV P+ T N L++G+CLA + D A +LL M S G K + ++S LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 63 NG 64
NG
Sbjct: 554 NG 555
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA L M+ G+ P+T T + L++G+C R + A L M S G D +++I
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 61 LING 64
++ G
Sbjct: 587 ILQG 590
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A M+ RG+ PD T N+++ C A D+A E+L +M G D +++ +
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 62 ING 64
++G
Sbjct: 273 LHG 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M++ GV PD T N+++ G+C + + A L M S G + D ++S+
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 61 LIN 63
L++
Sbjct: 307 LMD 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG-CKQDAFSHSIL 61
E MI G++P N+L+ G C ++++RA EL++ M +G C F +SI+
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA G + M GV PD T + LMD C R AR++ SM +G K + ++ L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 63 NGGSAR 68
G + +
Sbjct: 344 QGYATK 349
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L + M GV+PD T N ++ G R A+EL V + G + + +++I
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 61 LING 64
+++G
Sbjct: 622 ILHG 625
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 32/60 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E +GL +LM++ G++PD + L+ + + D+A + M +G +A ++ +I
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSK---GCKQDAFSHSILING 64
M + G P+ + N L+ G C +R A ELL M G D S++ +ING
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 6 GLAEL--MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVS-MGSKGCKQDAFSHSILI 62
G A L +I++G D L+ G C R A ++++ M GC + FS++IL+
Sbjct: 106 GFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILL 165
Query: 63 NG 64
G
Sbjct: 166 KG 167
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA E MI+R ++PD T + L+ G C+ R D A E+ M SKGC D ++SI
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 61 LING 64
LING
Sbjct: 332 LING 335
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+ +G PD T + L++G+C + + + +L M +G ++ +++I
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 61 LING 64
LI G
Sbjct: 367 LIQG 370
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M + G+ PD T N+L+ G C + R+ A ++ M + D F+ +
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 61 LING 64
LI+
Sbjct: 262 LIDA 265
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M+ GV+P+ T N L+ G C + ++A +L M G D +++I
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 61 LING 64
+I G
Sbjct: 437 IIRG 440
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G P+ N ++DG C + + D A +LL M G D +++ LI+G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRGV +T T L+ G+C A + + A E+ M G + ++++L++G
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI+ G P T +L++GFC DR A + M G K + ++ +I+G
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI RG+ PDT T +L+DGFC + D+A +++ M SKGC + + +ILI
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 63 NG 64
NG
Sbjct: 411 NG 412
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+AN + +LM+ +G +P+ T N L++G+C A+R D EL M +G D +++
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 61 LING 64
LI G
Sbjct: 444 LIQG 447
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M RGV DT T N L+ GFC + + A+EL M S+ + ++ I
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 61 LING 64
L++G
Sbjct: 479 LLDG 482
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PD T N L++G CL+ + A L+ M GC+ +A ++
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 61 LIN 63
++N
Sbjct: 234 VLN 236
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ G P+T T + L++G CL R A EL+ M G K D + + L+NG
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 202
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+ L MI+R +NP+ T + L+D F + A EL M +G D +++ L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 62 ING 64
I+G
Sbjct: 375 IDG 377
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++ G P+ T +++ C + + A ELL M + K DA +SI+I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 63 NG 64
+G
Sbjct: 271 DG 272
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L M +G+ + T N L+ GFC A R+D +LL M + + + S+
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 61 LIN 63
LI+
Sbjct: 339 LID 341
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + M+ R V P+ T L+DG C ++A E+ + + D ++I
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 61 LING 64
+I+G
Sbjct: 514 IIHG 517
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + +GV P T N ++ G C A L M G D ++++I
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 61 LI 62
LI
Sbjct: 584 LI 585
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +R + D + ++DG C D A L M KG + +++ILI G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T N+L++GFC+ DR D+A+++ M SK C D +++ LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 63 NG 64
G
Sbjct: 333 KG 334
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + E M+ + PD T N L+ GFC + R + EL M +G D +++
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 61 LING 64
LI G
Sbjct: 366 LIQG 369
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI++ +NP+ T NAL+D F +F A +L M + D F+++ LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 63 NG 64
NG
Sbjct: 298 NG 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ + ++ +
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 61 LINGGSAR 68
++NG R
Sbjct: 156 VVNGLCKR 163
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A E+ M K D + ++ +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 62 ING 64
I G
Sbjct: 437 IEG 439
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T ++L++G+C R A L+ M G + D + + LI+G
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG P+ T +++G C D A LL M + + D + +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 63 N 63
+
Sbjct: 193 D 193
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M + + D +++G C A + D +L S+ KG K + +++
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 61 LING 64
+I+G
Sbjct: 471 MISG 474
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L + M +G+ P+ T ++L+ C R+ A +LL M K + + +
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 61 LING 64
LI+
Sbjct: 261 LIDA 264
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++ ++PD T ++L++G CL DR D A ++ M SKGC D S++ LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 63 NG 64
NG
Sbjct: 338 NG 339
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEAN + +LM+ +G D + N L++GFC A R + +L M +G + +++
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 61 LING 64
LI G
Sbjct: 371 LIQG 374
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PD NA++D C R + A + + KG + + +++
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 61 LING 64
L+NG
Sbjct: 231 LVNG 234
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M QRG+ +T T N L+ GF A D+A+E M G D ++++IL+ G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
MI++ + P+ T +AL+D F + A+EL M D ++S LING
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T +L++GFC +R A L+ M G K D +++ +I+
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++G+ P+ T AL++G C + R+ A LL M K + ++S L++
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A M G++PD T N L+ G C ++A + M + D +++
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 61 LING 64
+I G
Sbjct: 441 VIRG 444
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + +++ LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 63 NG 64
NG
Sbjct: 408 NG 409
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T N L++GFC A R D EL M +G + +++
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 61 LING 64
LI+G
Sbjct: 441 LIHG 444
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T NAL+D F + A +L M + D F++S LI
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 63 NG 64
NG
Sbjct: 373 NG 374
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ + ++ +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 61 LINGGSAR 68
++NG R
Sbjct: 231 VVNGLCKR 238
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV+P+ T N L+DG C + ++A + + + ++++I+
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 62 ING 64
I G
Sbjct: 512 IEG 514
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + P T N +++G C A + + +L S+ KG K D ++
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 61 LING 64
+I+G
Sbjct: 546 MISG 549
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T ++L++G+C R A L+ M G + D + + LI+G
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG P+ T +++G C D A LL M + + + +S +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 63 N 63
+
Sbjct: 268 D 268
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M QRG+ +T T L+ GF A D A+ + M S G + +++
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 61 LING 64
L++G
Sbjct: 476 LLDG 479
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + ++S LI
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 63 NG 64
G
Sbjct: 406 KG 407
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T + L+ GFC A R + EL M +G + +++
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 61 LING 64
LI+G
Sbjct: 439 LIHG 442
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ D ++
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 61 LINGGSAR 68
++NG R
Sbjct: 229 VVNGLCKR 236
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + A +L M + D F++S LI
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 63 NG 64
NG
Sbjct: 371 NG 372
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++G+C + R A L+ M G K D F+ + LI+G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M + + D N ++DG C D A L M +KG + D F++S
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 61 LIN 63
LI+
Sbjct: 299 LIS 301
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG PD T +++G C D A LL M + D ++ +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 63 NG 64
+G
Sbjct: 266 DG 267
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV+P+ T N L+DG C + +A + + + D ++++I+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 62 ING 64
I G
Sbjct: 510 IEG 512
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E + + + PD T N +++G C A + + EL ++ KG + +++ +I+G
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E L M QRG+ +T T L+ GF A D A+ + M S G + +++I
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 61 LING 64
L++G
Sbjct: 474 LLDG 477
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L M +G+ PD T ++L+ C R+ A LL M + + + S
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 61 LING 64
LI+
Sbjct: 334 LIDA 337
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
+GV+P+ N ++ GFC + A LL M G ++ +++ LI AR+R
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR---ARLR 585
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M +R V+PD T N+L++G C+ R D A+++L M +KGC D +++ LI
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 63 NG 64
NG
Sbjct: 322 NG 323
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LM+ +G PD T N L++GFC + R D +L M +G D +++
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 61 LING 64
+I G
Sbjct: 355 IIQG 358
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++GFC +R A +L+ M G + D ++ +I+G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L M QRG+ DT T N ++ G+ A R D A+E+ M S + + ++SI
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 386
Query: 61 LING 64
L+ G
Sbjct: 387 LLYG 390
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+ R + P+ T A++D F +F A +L M + D F+++ LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 63 NG 64
NG
Sbjct: 287 NG 288
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M + G PD N ++DG C + A EL M G + DA +++ L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 63 NG 64
G
Sbjct: 217 AG 218
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L E M + + D +T N ++ G C + A +L S+ KG K D S++
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 61 LING 64
+I+G
Sbjct: 457 MISG 460
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++R ++P T ++L++GFC+ DR D A+++ M SK C D +++ LI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 63 NG 64
G
Sbjct: 404 KG 405
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + E M+ + PD T N L+ GFC R + E+ M +G + +++I
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 61 LING 64
LI G
Sbjct: 437 LIQG 440
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M G P+T T N L+ G L ++ A L+ M +KGC+ D ++ +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 61 LING 64
++NG
Sbjct: 227 VVNG 230
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A L + M +G+ P+ T ++L+ C R+ A LL M + D F+ S
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 61 LING 64
LI+
Sbjct: 332 LIDA 335
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV P+ T N L+DG C + ++A + + + ++++I+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 62 ING 64
I G
Sbjct: 508 IEG 510
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + P T N +++G C A + + +L ++ KG K D +++
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 61 LING 64
+I+G
Sbjct: 542 MISG 545
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P+ T ++L++G+C + R A L+ M G + + + + LI+G
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L M Q + P N ++DG C D A L M +KG + + ++S L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 62 IN 63
I+
Sbjct: 298 IS 299
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ +G PD T +++G C D A LL M + ++ +I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 63 NG 64
+G
Sbjct: 264 DG 265
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + +++ LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 63 NG 64
G
Sbjct: 403 KG 404
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T N L+ GFC A R + EL M +G + +++
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 61 LING 64
LI G
Sbjct: 436 LIQG 439
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + A +L M + D F++S LI
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 63 NG 64
NG
Sbjct: 368 NG 369
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M P+T T N L+ G L ++ A L+ M ++GC+ D F++
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 61 LINGGSAR 68
++NG R
Sbjct: 226 VVNGLCKR 233
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + ++A + + + D ++++I+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 62 ING 64
I G
Sbjct: 507 IEG 509
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + + PD T N +++G C A + + +L S+ KG K + ++
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 61 LING 64
+I+G
Sbjct: 541 MISG 544
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ RG PD T +++G C D A LL M + D ++ +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 63 NG 64
+
Sbjct: 263 DA 264
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T ++L++G+C R A L+ M + + + + LI+G
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA LA ++ +G+ PD T N+L+ G CL A EL M SKGC+ D F++++
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 61 LING 64
LI+
Sbjct: 441 LIDS 444
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + MI G PD T N+L+ FC +A +++ +M S GC+ D ++
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 61 LING 64
LI+G
Sbjct: 581 LISG 584
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L E M +G PD T N L+D C + D A +L M GC + +++ LI+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 64 G 64
G
Sbjct: 479 G 479
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D N + E+ Q G PD T N L++G C A A E++ M +G D ++++ +
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 62 ING 64
I+G
Sbjct: 337 ISG 339
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
+ ++M+Q G +PD T N+++ G C A E+L M ++ C + +++ LI+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + + M G T N L+DGFC A++ A E+ M G +++ +++
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 61 LING 64
LI+G
Sbjct: 511 LIDG 514
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + + MI R +P+T T N L+ C ++ + A EL + SKG D + +
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 61 LING 64
LI G
Sbjct: 406 LIQG 409
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA + + M GV+ ++ T N L+DG C + R + A +L+ M +G K D ++++ L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 63 N 63
Sbjct: 548 T 548
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M G PD T L+ G C A R + A +LL S+ KG +++
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 61 LING 64
+I G
Sbjct: 616 VIQG 619
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING--------GS 66
G+ PD ST N L+ C A + A +L M S G D + + ++ G G+
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 67 ARIRK 71
RIR+
Sbjct: 244 LRIRE 248
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R ++PD T ++L++GFC+ DR D A+ + M SK C + +++ LI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 63 NG 64
G
Sbjct: 404 KG 405
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + ELMI + P+ T N L+ GFC A R D EL M +G + +++
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 61 LING 64
LI+G
Sbjct: 437 LIHG 440
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T N+L++GFC +R A L+ M G + D+F+ + LI+G
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + A +L M + D F++S LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 63 NG 64
NG
Sbjct: 369 NG 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L M++ G PD+ T N L+ G +R A L+ M KGC+ D ++ I
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 61 LINGGSAR 68
++NG R
Sbjct: 227 VVNGLCKR 234
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E + + + PD T N +++G C A + + +L S+ KG K + +++ +++G
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV PD T + L+DG C + + A + + + D ++++I+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 62 ING 64
I G
Sbjct: 508 IEG 510
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 14 RGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+GV P+ T +M GFC + A L M +G D+ +++ LI
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A L + M +NPD T N LM G C +F+ AREL+ M +G K D S++
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 61 LINGGSAR 68
LI+G S +
Sbjct: 543 LISGYSKK 550
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA+ L E ++ +G+ PD N LMDG C DRA LL M D +++ L+
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 63 NG 64
G
Sbjct: 510 RG 511
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A G +M G+ P T N L+ GF L R + AR ++ M SKG + D +++
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 61 LIN 63
+++
Sbjct: 301 ILS 303
Score = 35.4 bits (80), Expect = 0.093, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+++G+ P T N L+ G + ++ + A L+ + KG D+ +++ILING
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA LM ++G P T TCN ++ +R + A M K + ++ +I
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 61 LIN 63
+IN
Sbjct: 231 MIN 233
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
M+ G NP T NAL+ G + A ELL M S+G
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN L + MI RG++P+ T N LMDG+C+ +R A +L M C D + +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 61 LING 64
LI G
Sbjct: 374 LIKG 377
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EAN + +LM++ +PD T +L+ G+C+ R D ++ ++ +G +A ++SI
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 61 LING 64
L+ G
Sbjct: 409 LVQG 412
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M++ G PD T N++++G C + A +LL M + K D F++S
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 61 LIN 63
+I+
Sbjct: 234 IID 236
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+++ G PDT+T N L+ G L + A L+ M GC+ D +++ ++NG
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 13 QRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+RG+ + T + L+ GFC + + A EL M S G D ++ IL++G
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + M+ GV PD T L+DG C + ++A E+ + ++ +I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 64 G 64
G
Sbjct: 482 G 482
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E MI+R ++P+ T ++L++GFC+ DR A+++L M K C + +++ LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 63 NG 64
NG
Sbjct: 401 NG 402
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA + ELMI++ P+ T N L++GFC A R D+ EL M +G + +++
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 61 LING 64
LI+G
Sbjct: 434 LIHG 437
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G PD T N+L++GFC +R A L+ M G K D + + LI+G
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + M++ G PDT T L+ G L ++ A L+ M +GC+ D ++
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 61 LINGGSAR 68
++NG R
Sbjct: 224 VVNGLCKR 231
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L MI+R +NP+ T +AL+D F + +A +L M + + F++S LI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 63 NG 64
NG
Sbjct: 366 NG 367
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + + M+ GV+P+ T N L+DG C + +A + + + D ++++I+
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 62 ING 64
I G
Sbjct: 505 IEG 507
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+QRG PD T A+++G C D A LL M + + + +S +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 63 N 63
+
Sbjct: 261 D 261
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L M QRG+ +T T L+ GF A D A+ + M S G + +++I
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 61 LING 64
L++G
Sbjct: 469 LLDG 472
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 3 EANGLAELMIQR-GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
EA L E MI + G++PD T N +++GFC A +RA+++L M GC + +++S L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 62 ING 64
+NG
Sbjct: 310 MNG 312
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + + M + G NP+ +ALM+GFC + A++ + G K D ++
Sbjct: 284 VERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT 343
Query: 61 LIN 63
L+N
Sbjct: 344 LMN 346
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + MIQ V+P+ T N++++G C+ R A++ M SKGC + +++
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 61 LING 64
LI+G
Sbjct: 322 LISG 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L LM++ G P+ N L+DG C + A ELL M KG D +++ L+
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 63 NG 64
G
Sbjct: 219 TG 220
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A +LM +G P+ T N L+ GFC D +L M +G D F+++
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 61 LING 64
LI+G
Sbjct: 357 LIHG 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + M G N D T N L+ G+C + A ++ M S+ D +H I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 61 LING 64
L++G
Sbjct: 392 LLHG 395
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++R +NPD T AL+D F D A+EL M + +++ +ING
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T +L+ GFCL +R A L++ M G + + ++ LI+G
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 24 NALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
N ++ G C AD+ ++A EL + +G K DA +++I+I G
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + M+ RG+ PD T N ++ G C DRA E++ ++ KGC+ D S++I
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 61 LI 62
L+
Sbjct: 304 LL 305
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L +LM ++G+ PD + + L+ FC R D A E L +M S GC D +++
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 61 LI 62
++
Sbjct: 409 VL 410
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M +P T N ++ GFC A R + A +L SM GC+ + ++++
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 548
Query: 61 LING 64
LI G
Sbjct: 549 LIEG 552
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E+ L E M+++G NPD C L+ GF +A ++ + G + D F+++ LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 63 NG 64
NG
Sbjct: 166 NG 167
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
++++ PD NAL++GFC +R D A +L M SK D +++I+I +R
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A + + M + +PDT T N ++ C + D A ++L + S C+ +++I
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 61 LI 62
LI
Sbjct: 234 LI 235
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A E MI G PD N ++ C + D+A E+ +G GC ++ S++
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 61 LING 64
+ +
Sbjct: 444 MFSA 447
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G++PD T N+++ C D A ELLV M S +++I++ G
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E L M +P+ T + L+ C + + A LL M KG DA+S+ L
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 62 I 62
I
Sbjct: 375 I 375
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + ++ P T L++ L D A +L+ M S+G K D F+++
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 61 LING 64
+I G
Sbjct: 269 IIRG 272
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + +LM+ +G PD T N L+ GFC + R + +L M +G DAF+++
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 61 LING 64
LI+G
Sbjct: 365 LIHG 368
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + MI+R V P+ T N+L++GFC+ A+ + M SKGC D +++ LI
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 63 NG 64
G
Sbjct: 332 TG 333
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++ G P T +L++GFC +RF A L+ SM G + ++ +ING
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 193
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
EA L + M G P+ N +++G C + A E+ M KG + DA +++
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 61 LINGGS 66
LI+G S
Sbjct: 225 LISGLS 230
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + E + + ++ D T N ++ G C D+ A L S+ KG K DA ++
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 61 LING 64
+I+G
Sbjct: 470 MISG 473
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M++R ++P+ AL+D F AR L M + + F+++ LING
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A + M+ GV+PD T N L+D C + ++A ++ + D +++I
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 61 LING 64
+I G
Sbjct: 435 IIQG 438
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M G++PD+ T +L+ G C+AD D A L MG KG Q++ ++++
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 61 LINGGS 66
+I+G S
Sbjct: 580 MISGLS 585
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ + ++M Q+G D TCN + F R+D A++ L M G K S++
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 61 LIN 63
LI+
Sbjct: 475 LID 477
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L M +GV P+ T N ++ +C + AR+L +M + G D+++++
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 61 LING 64
LI+G
Sbjct: 545 LIHG 548
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA M++ GV T + L+D +C + A+ L V M SKG + +A +++++
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 62 I 62
I
Sbjct: 511 I 511
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A L + + ++G++P + T AL+DG C A L+ M SKG +
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 61 LING 64
LI+G
Sbjct: 405 LIDG 408
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
M A L M +GVN N L+DG+C D A + M KG + D F+
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ GV + +++G C +++++L+ KG K +A++++ +IN
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A L + M +RG+ D +L+ C RA L + KG ++++
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 61 LING 64
LI+G
Sbjct: 370 LIDG 373
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA MIQR VNP+ T N+L++G C+ D A+++L + SKG +A +++ LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 63 NG 64
NG
Sbjct: 332 NG 333
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +++ +G P+ T N L++G+C A R D ++L M G D F+++
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 61 LING 64
L G
Sbjct: 365 LYQG 368
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ + +M + GV+ DT T N L G+C A +F A ++L M S G D ++ +I
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 61 LING 64
L++G
Sbjct: 400 LLDG 403
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ GV+PD T N L+DG C + +A L + +++I+I G
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A + ++M+ GV+PD T N+L++G C +F+ E +M KGC + F+ +I
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 61 LI 62
L+
Sbjct: 537 LL 538
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A+GL ++MI +G PD T N L+ G+ + + A E+L M G D ++++
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 61 LING 64
L+NG
Sbjct: 502 LLNG 505
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA LA M ++G+ P+ T N L++G C A L+ M SKG D F+ +ILI
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 63 NGGSARIR 70
+G S +++
Sbjct: 469 HGYSTQLK 476
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+DEA GL E M + VNPD T L+DGFC D A L M
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D+A+ + M RG+ PD + M FC R A LL +M S+GC+ + ++ +
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 62 ING 64
+ G
Sbjct: 188 VGG 190
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + +I++G PD T N L+ G C +F A L M ++G + D+++++
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 61 LING 64
LI G
Sbjct: 327 LIAG 330
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
E L + +I+RGV P+ T N + G C D A ++ + +G K D +++ LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 63 NG 64
G
Sbjct: 294 YG 295
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ G+ PD+ T N L+ G+C A ++ G D F++ LI+G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGS 66
G PD T +L+DG C +RA L KG K + ++ LI G S
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + + Q+GVNP+ AL+DG+C A + D A +L M SK C ++ + +
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 61 LING 64
LI+G
Sbjct: 573 LIHG 576
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M + G+ P+ T L+D C +F++ARELL M KG + +++ LI
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 63 NGGSAR 68
NG R
Sbjct: 401 NGYCKR 406
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A G+ M++R V PD T N+L+DG C + FD A LL M +G D ++++ +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 63 N 63
+
Sbjct: 505 D 505
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EAN +++ G++PD T +L+ G+C D A ++ M KGC+++ +++
Sbjct: 234 VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 61 LING 64
LI+G
Sbjct: 294 LIHG 297
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L LM RG+ PD T +++D C + R + A +L S+ KG + ++ L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 62 ING 64
I+G
Sbjct: 539 IDG 541
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A + M+ G PD T + +C R A +++ M G D F++S L
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 62 ING 64
I G
Sbjct: 679 IKG 681
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + ELM R ++P+T T N L+ G+C ++ +A +L M + D +++
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 61 LING 64
LI+G
Sbjct: 468 LIDG 471
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 36/63 (57%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A L M+++G+ P+ T NAL++G+C + A +++ M S+ + +++ L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 62 ING 64
I G
Sbjct: 435 IKG 437
Score = 32.3 bits (72), Expect = 0.93, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA+ + E M+ + P++ T NAL+ G C + A L M G + + +I
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 61 LIN 63
LI+
Sbjct: 608 LIH 610
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE + M++ V P+ T N +++G+C + A + + + G D F+++
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 61 LINGGSAR 68
LI G R
Sbjct: 259 LIMGYCQR 266
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + M +G + L+ G C+A R D A +L V M C ++++
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 61 LING--GSAR 68
LI GS R
Sbjct: 329 LIKSLCGSER 338
>sp|Q1PFC5|PP130_ARATH Pentatricopeptide repeat-containing protein At1g77405
OS=Arabidopsis thaliana GN=At1g77405 PE=2 SV=1
Length = 458
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M EAN + M+ RG PD T N L+DG C +R RA EL M +KGC + +++
Sbjct: 264 MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNS 323
Query: 61 LI 62
I
Sbjct: 324 FI 325
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ + + + ++MIQ ++P+ T ++L+ G C+ +R D A ++L M SKGC + ++S
Sbjct: 279 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 338
Query: 61 LING 64
L NG
Sbjct: 339 LANG 342
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + +LMI +G P+ T + L +GF + R D +LL M +G + S +
Sbjct: 314 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 373
Query: 61 LING 64
LI G
Sbjct: 374 LIKG 377
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M++ G+ PD T ++L++GFCL++ A + M G K+D +ILI+
Sbjct: 149 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILID 201
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+ L + M QRGV +T +CN L+ G+ A + D A + M S G + S++I
Sbjct: 349 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 408
Query: 61 LING 64
++ G
Sbjct: 409 VLAG 412
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSAR 68
M RG++P+ T ++L+ G C + R A L M SK + + S LI+ + R
Sbjct: 219 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 276
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++PD TCN L++ FC + A L M G + D + S L+NG
Sbjct: 119 ISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNG 167
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++ A L + MI GV PDT TCN L+ GFC ++ + A EL + D +++I
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 61 LING 64
+I+G
Sbjct: 543 IIHG 546
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGS 48
EA L + M+ R + PDT T N+++ GFC +RFD A+ + M S
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M++ G+ P T N L++G CL R A L+ M KG D ++ ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 63 NG 64
NG
Sbjct: 269 NG 270
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DE L + +RG+ +T+T N L+ GFC D + A++L M S G D + +I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 61 LING 64
L+ G
Sbjct: 508 LLYG 511
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M+++G+ P+ T N ++DGFC R+ A+ LL M + D + + LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 63 NG 64
+
Sbjct: 374 SA 375
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFS 57
+ +AN L M G PD ST N L+ G A D++ EL+ M S G DAF+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L E++ ++ DT N ++ G C + D A +L S+ G + D ++++
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 61 LING 64
+I+G
Sbjct: 578 MISG 581
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
D+A + +LM +PD T N ++D +C A R D +LL + +G + +++
Sbjct: 417 FDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 61 LING 64
LI+G
Sbjct: 473 LIHG 476
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L + GV PD T N ++ GFC A L M G + D +++
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 61 LING 64
LI G
Sbjct: 613 LIRG 616
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKG 50
+ + G PD T N L+ G CL DR A L M G
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L M + + PD +A++D C A+ L M KG + F+++ +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 64 G 64
G
Sbjct: 340 G 340
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MI+R +NPD T NAL+ + A +L M + D +++ +I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 63 NG 64
G
Sbjct: 409 YG 410
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + +I RGV+PD + N LM G C RF A+ L M + DA+ ++
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 61 LING 64
LI+G
Sbjct: 491 LIDG 494
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G + ++G+ P+ + L+ +C + +D A +LL+ M +GCK D ++ ILI+
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Query: 64 G 64
G
Sbjct: 424 G 424
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + L +++GV D NA++ GFC + D A + M + D F++S +
Sbjct: 502 DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 62 ING 64
I+G
Sbjct: 562 IDG 564
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M+ R + PD L+DGF + FD AR++ KG K D H+ +I G
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ L M +RG PD T L+ G ++ D A + V + +G DA +++L
Sbjct: 397 DIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNML 456
Query: 62 ING 64
++G
Sbjct: 457 MSG 459
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA M + + PD T + ++DG+ A ++ M CK + +++
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 61 LING 64
LING
Sbjct: 596 LING 599
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PD CN+L+ + R AR++ M +G D +S IL+ G
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKG 214
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + G+ P+ T N++M G C + + DRA + LV M ++GCK + S++I
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 61 LING 64
LI G
Sbjct: 560 LIEG 563
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
A L + M RG PD T N L++G C R D A + L M S GC+ + +H+I++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ E M Q G P++ + N L+ GFC + DRA E L M S+GC D +++ ++
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E M+ RG PD T N ++ C + + A E+L + SKGC +++
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 61 LING 64
+I+G
Sbjct: 455 VIDG 458
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A + + M+QR PD T L++ C A +LL M +GC D ++++
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 61 LING 64
L+NG
Sbjct: 280 LVNG 283
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E E M+ G PD C L+ GFC + +A ++L + G D ++++
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 61 LING 64
+I+G
Sbjct: 178 MISG 181
>sp|Q9SJN2|PP187_ARATH Pentatricopeptide repeat-containing protein At2g36240
OS=Arabidopsis thaliana GN=At2g36240 PE=2 SV=1
Length = 497
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + M + PD T N L++G+C + +FD A +L M KGC+ + S +
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 61 LING 64
LI G
Sbjct: 269 LIRG 272
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
++A+G E M+ G+ PD+ T N L+ C +D A L + SKG + D ++ +L
Sbjct: 385 EKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 62 INGGSARIRK 71
++G + R+
Sbjct: 445 VSGFTKEGRR 454
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+AN L L +G PD +T + L+ GF R L+ M K D F+++ L+
Sbjct: 421 DANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Query: 63 NGGS 66
+G S
Sbjct: 481 DGLS 484
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++E +A MI+ G +TC L+DG C R D A L++ + +K F +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 61 LI 62
L+
Sbjct: 339 LV 340
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ N +++G+ + D+A MG + K D + +ILING
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILING 237
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A L M ++G P+ + N L+ GF + + + ++ M GC+ + IL
Sbjct: 245 DLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEIL 304
Query: 62 ING 64
++G
Sbjct: 305 VDG 307
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L M +G PD NALM G A + A LL M GC+ D SH+I
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 61 LING 64
++NG
Sbjct: 555 ILNG 558
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 9 ELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
E + G+ PD T N L+ F A F+ A ++ M KG + DA ++S +++
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 33.1 bits (74), Expect = 0.45, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EAN L M + G D ++ N +++GF RA E+ ++ G K D +++
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 61 LI 62
L+
Sbjct: 590 LL 591
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ E + + M V+P T + L+DG+C +R ++A LL M KG ++
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 61 LING-GSAR 68
LIN G A+
Sbjct: 450 LINALGKAK 458
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA G + M++ G+ PD N LM+ R + + MG C S++
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 61 LI 62
+I
Sbjct: 379 VI 380
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L ++M ++G P+ T A++DGF + + + ELL MGSKG + ++ +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 62 IN 63
I+
Sbjct: 821 ID 822
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
P+ T AL+DGFC + R + AR+LL +M +GC+ + + LI+G
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA L + M G P+ +AL+DG C + D A+E+ M G +++S
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 61 LIN 63
LI+
Sbjct: 715 LID 717
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
D A+ + M++ P+ ++DG C + D A +L+ M KGC+ + +++ +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 62 ING 64
I+G
Sbjct: 786 IDG 788
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G P+ T AL+ + A + A EL +M S+GC + ++S LI+G
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-GSK 49
AN L E M+ G P+ T +AL+DG C A + ++A ++ M GSK
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A L E M + G+ D T ++D FC A ++AR+ M GC + +++
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 61 LING 64
LI+
Sbjct: 559 LIHA 562
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 20 TSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ST N+L++ CLA++ + A +L M KG + S LI G
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 18 PDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
PDT L+ G C A F+ A + L M + C + ++S L+ G
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 346
>sp|Q8L6Y3|PP396_ARATH Pentatricopeptide repeat-containing protein At5g24830
OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1
Length = 593
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A G M++RGVNPD T N L+ C +FD A +L +M + G D S+ +
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 61 LING 64
+I G
Sbjct: 376 IIQG 379
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A+GL M + G +P+ + N L+ G C + D+A L +M G + + + +I
Sbjct: 172 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 61 LING 64
+++
Sbjct: 232 IVHA 235
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++PDT+T N L+ C A +L M +GC+ D +++ L+ G
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRG 519
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 7 LAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
L + M++RG PD T L+ G C R +A LL + + G D IL
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M Q+ V D+ N ++ G C + A + M +G D F+++ LI+
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L E MI +G+ P T + L+DG C R + A+ LLV M S G D ++S+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 61 LING 64
LI+G
Sbjct: 318 LIDG 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M +A+ + + M++ G+ P+ N L+ GFC + ++A+ELL M KG +A ++
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 61 LING 64
+I+G
Sbjct: 703 IIDG 706
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA M+ +G+ D T LM+G D+ D A E+ M KG D FS+ +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 63 NGGS 66
NG S
Sbjct: 635 NGFS 638
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M ++G+ PD N+L+ G A R D AR LV M G K +AF++ I+G
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Score = 36.2 bits (82), Expect = 0.053, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A L + M +G++P+ T ++DG+C + A L M KG D+F ++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 61 LING 64
L++G
Sbjct: 738 LVDG 741
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L + MI G+ P +L++G+C + ELLV M + +++
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 61 LING 64
++ G
Sbjct: 423 VVKG 426
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A + + MI G P+ L+ F RF A +L M +G D F ++
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 61 LINGGSARIR 70
LI G S R
Sbjct: 493 LIIGLSKAKR 502
Score = 28.9 bits (63), Expect = 10.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA L + M +G+ PD+ L+DG C + +RA + KGC +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNA 771
Query: 61 LIN 63
LIN
Sbjct: 772 LIN 774
>sp|Q9MAG8|PPR79_ARATH Putative pentatricopeptide repeat-containing protein At1g53330
OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1
Length = 471
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+E + + E M ++G PDT T N L++GFC+ + + A +L M KG K D S++++
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 62 INGGSARIRK 71
+ G RI+K
Sbjct: 335 L-GVFFRIKK 343
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
+ AN + + M+++G+ PD + N ++ F +++ A L M +GC D S+ I+
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 62 ING 64
+G
Sbjct: 370 FDG 372
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCK 52
+EA L E M +RG +PDT + + DG C +F+ A +L M KG K
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK 395
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 16 VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ D + + L+ A R + +L M KGCK D ++++LING
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING 302
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L MI+ + P+ T +L++GFC+ D AR++ M +KGC D +++ LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 63 NG 64
NG
Sbjct: 325 NG 326
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + LM +G PD +L++GFC + D A ++ M KG + +++
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 61 LING 64
LI G
Sbjct: 358 LIQG 361
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A+ L M +R + PD T NAL+D F +F A EL M + F+++ LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 63 NG 64
NG
Sbjct: 290 NG 291
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
M++ G PD T +L++GFCL +R + A ++ M G K D ++ +I+
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + M++ G+ PD ++D C + A L M + G + D ++
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 61 LING 64
L+NG
Sbjct: 218 LVNG 221
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
GV+ D TCN LM+ FC + + A L M G + D + + LING
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLING 151
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A L + M G+ PD +L++G C + R+ A LL M + K D + + LI+
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 64 G 64
Sbjct: 256 A 256
>sp|Q7X6A5|PPR81_ARATH Pentatricopeptide repeat-containing protein At1g55630
OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1
Length = 477
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A + + M ++G P+ T N+++ GFC+A +F A LL M S+GC + +S
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 61 LIN 63
L+N
Sbjct: 438 LVN 440
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 12 IQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
++ G PD ++ G+ ++A E+ M KG + F+++ +I G
Sbjct: 354 VKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRG 406
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EAN + + M G+NP+ T N L+DGFC + +A L + S+G +++I
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 61 LING 64
L++G
Sbjct: 379 LVSG 382
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A + + M +RG+ P T L+D F +D ++A +L +SM G D ++S+LI+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 64 G 64
G
Sbjct: 452 G 452
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A L M + G+ PD T + L+ GFC+ + + A L SM K C+ + ++
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 61 LING 64
+I G
Sbjct: 484 MILG 487
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+ + G +P+ L+DG C ++A++L MG G + ++++LING
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ +A L + RG++P T N L+ GFC A +++ M +G K +++I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 61 LIN 63
LI+
Sbjct: 414 LID 416
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RGV+ + T N L+ G C + + A +++ M S G + +++ LI+G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA+ L + M+++ P+ N ++ G+C RA +LL M K + S+
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 61 LI 62
+I
Sbjct: 519 MI 520
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD A E M G++P+ T +LM+G C +R D+A E+ M +KG K D ++
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 61 LINGGSAR 68
LI+G R
Sbjct: 660 LIDGFCKR 667
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA L M RG+ P+ + N +M G C D AR + ++ KG K + +++SIL
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 62 ING 64
I+G
Sbjct: 520 IDG 522
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MD+A + + M +GV D AL+DGFC + A L + +G ++
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 61 LING 64
LI+G
Sbjct: 695 LISG 698
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A+ L +++ G+NP N+L+ GF A +L M G + D +++
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 61 LING 64
LI+G
Sbjct: 730 LIDG 733
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M A L + M++ G+ D T L+DG A EL M + G D +++
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 61 LINGGSAR 68
++NG S +
Sbjct: 765 IVNGLSKK 772
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA E M +G+ P+ T ++LMDG C R +A EL M ++GC+ + +++
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 61 LING 64
LI G
Sbjct: 303 LITG 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
M +RG +PD+ T L+ G C R D A++L M K C +++ LING
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA L M+++ P T +L++G C + D A L M SKG + + F++S
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 61 LING 64
L++G
Sbjct: 268 LMDG 271
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L E+M+ RG P+ T L+ G C + A ELL M +G K DA + +I
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 63 NG 64
+G
Sbjct: 340 SG 341
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLAD-RFDRARELLVSMGSKGCKQDAFSHSILING 64
M + G+ P ++ N L+ C D D ++ + M +GC D++++ LI+G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISG 201
>sp|Q8LE47|PPR87_ARATH Pentatricopeptide repeat-containing protein At1g61870,
mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2
SV=2
Length = 408
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L + M+ G+ P+T T + L+ GFC D F+ A++L M ++GCK D+ + LI
Sbjct: 275 EAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLI 334
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DE + +M RGVN ST N + C + A+ LL M S G K + ++S L
Sbjct: 239 DEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHL 298
Query: 62 ING 64
I+G
Sbjct: 299 IHG 301
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
G+ PD T N ++ FC + + ++ M KG K ++ S ++I+G
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISG 231
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
M ++G+ P++S+ ++ GF D+ D ++L M +G +++I I
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRI 264
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+ EA+ + E MI+RGV P+ T L+DG C + A +LL M K + +A +++I
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 61 LIN 63
+IN
Sbjct: 358 IIN 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D L + +++RG +P T N L+ GFC + A E+ M +G + + ++++
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 61 LING 64
LI+G
Sbjct: 323 LIDG 326
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D+A L E M + PD + N ++DG A A LLV M G D F++S
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 61 LIN 63
LIN
Sbjct: 605 LIN 607
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM--GSKGCKQDAFSHSI 60
+A + ELM +R PD T N L+ G C D A +LL M S D S++
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 61 LING 64
LI+G
Sbjct: 430 LIHG 433
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
+A L M + + PD + N ++ GFC ++A EL M GC + ILI
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 63 NG 64
+
Sbjct: 220 DA 221
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
MDEA G + M G+ D +L+ GFC DR + L + +G A +++
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 61 LING 64
LI G
Sbjct: 288 LIRG 291
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1 MDEANGLAELMIQRG--VNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSH 58
+DEA+ L LM++ +PD + NAL+ G C +R +A ++ + K D +
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 59 SILIN 63
+IL+N
Sbjct: 463 NILLN 467
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 4 ANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
A G+ LM++RG + N L+ G C +A LL M D FS++ +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 64 G 64
G
Sbjct: 186 G 186
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+++A LA M G + T L+D FC A + D A L M G + D ++
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 61 LING 64
LI G
Sbjct: 253 LIRG 256
>sp|Q9LNC0|PPR16_ARATH Pentatricopeptide repeat-containing protein At1g06270
OS=Arabidopsis thaliana GN=At1g06270 PE=2 SV=1
Length = 343
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 15 GVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILIN 63
G +PDT TCN L+ C D+ D A +++ M + GC D S+ +IN
Sbjct: 166 GYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVIN 214
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+DEA + M+++G+ PDT T ++L+ GFC R A +L M G D F+++
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 61 LING 64
LIN
Sbjct: 526 LINA 529
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 3 EANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILI 62
EA L E M++ G+ PD T AL++ +C+ ++A +L M KG D ++S+LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 63 NGGSARIR 70
NG + + R
Sbjct: 563 NGLNKQSR 570
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
+D A L + M +G P+ T N L+DG+C + D +LL SM KG + + S+++
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 61 LING 64
+ING
Sbjct: 281 VING 284
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILINGGSARIR 70
M++ V+P+ T N L+ GFC A D A L M +KGC + +++ LI+ G ++R
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID-GYCKLR 254
Query: 71 K 71
K
Sbjct: 255 K 255
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M++A + E M ++G++PD + + ++ GFC + D A + M KG K D ++S
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 61 LING 64
LI G
Sbjct: 491 LIQG 494
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+EA + M G +P T NAL++G C+ + + A +L M KG D S+S
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 61 LING 64
+++G
Sbjct: 456 VLSG 459
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
M+ A + M RG+ P+ T L+DGF + A +L M G +++
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 61 LING 64
LING
Sbjct: 421 LING 424
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 11 MIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSILING 64
+I+ N + + +L+ GFC+ A ++ SM K K D +++I+I+G
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM-GSKGCKQDAFSHS 59
+++A L M+++GV PD T + L++G R A+ LL+ + + D H+
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 60 ILIN 63
++ N
Sbjct: 596 LIEN 599
>sp|Q9STK5|PP269_ARATH Pentatricopeptide repeat-containing protein At3g48250,
chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2
SV=1
Length = 621
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 2 DEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSIL 61
DEA + + M G PD T + L+ G C A R + AR +L M ++GC D + +IL
Sbjct: 387 DEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTIL 446
Query: 62 ING 64
I G
Sbjct: 447 IQG 449
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSMGSKGCKQDAFSHSI 60
++EA G+ + M +G PD T L+ G C + D+A +M KG D+ +
Sbjct: 421 LEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDV 480
Query: 61 LING 64
LI+G
Sbjct: 481 LIDG 484
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 1 MDEANGLAELMIQRGVNPDTSTCNALMDGFCLADRFDRARELLVSM 46
+D+A M+++G + D++ + L+DGF + ++F+ A L+ M
Sbjct: 456 LDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEM 501
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,616,276
Number of Sequences: 539616
Number of extensions: 742791
Number of successful extensions: 2825
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1487
Number of HSP's gapped (non-prelim): 1344
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)