Query 042280
Match_columns 301
No_of_seqs 150 out of 908
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 07:41:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042280.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042280hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1o70_A Fasciclin I, FAS I, FCN 100.0 3E-37 1E-41 290.0 10.6 229 19-284 46-317 (324)
2 2vxp_A Transforming growth fac 99.9 7.6E-24 2.6E-28 174.5 8.6 120 146-275 3-132 (132)
3 1w7d_A Fasciclin-like protein; 99.9 1.2E-24 4.1E-29 180.5 3.3 122 146-278 4-137 (137)
4 1nyo_A Immunogenic protein MPT 99.9 1.4E-23 4.8E-28 179.2 6.3 124 144-278 27-163 (163)
5 1w7d_A Fasciclin-like protein; 99.7 2.2E-18 7.7E-23 142.5 6.1 88 19-115 35-136 (137)
6 1o70_A Fasciclin I, FAS I, FCN 99.7 5.6E-18 1.9E-22 158.7 5.1 123 154-279 22-159 (324)
7 2vxp_A Transforming growth fac 99.7 2.5E-17 8.4E-22 135.4 6.0 87 19-113 34-132 (132)
8 1nyo_A Immunogenic protein MPT 99.7 2.7E-17 9.3E-22 140.2 5.3 85 21-115 66-162 (163)
9 2raq_A Conserved protein MTH88 10.5 86 0.0029 23.6 1.0 15 261-275 70-84 (97)
10 2x3d_A SSO6206; unknown functi 9.8 94 0.0032 23.4 1.0 15 261-275 69-83 (96)
No 1
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=100.00 E-value=3e-37 Score=289.96 Aligned_cols=229 Identities=20% Similarity=0.240 Sum_probs=166.2
Q ss_pred CceEEEecCChhhhcCCCCC-------H-HHhhhcccCCccCccccCCCCCC--CcccccCCCceEEEEEeCC--CCeEE
Q 042280 19 PFLTIFSPSDSAFVSSGQPS-------L-SLLEFHFSPLSLPLYSLKKLPCN--SKIPTLSPSHSLVITSFPS--DCNVS 86 (301)
Q Consensus 19 ~~~TiFAPtd~Af~~~~~~~-------~-~lL~yHiv~g~~~~~~L~~~~~~--~~l~Tll~g~~l~vt~~~~--~~~v~ 86 (301)
+.+|||||+|+||.+..... + ++|+|||++|+++.++|.+...+ ..++|+..+..++++.+++ ++.++
T Consensus 46 ~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~ 125 (324)
T 1o70_A 46 TEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVIT 125 (324)
T ss_dssp SSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEE
T ss_pred CCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEE
Confidence 45799999999998753211 2 89999999999999998754211 1678886444477776632 35688
Q ss_pred Eee----EEEecCccc-cCCceEEEEeCCccCCCCCCCCCCCCCCCCCCCCCCccCCCchhhHHHHHHHHhhc-ChHHHH
Q 042280 87 LKG----VNLTHKPIY-NDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSK-GYSLMG 160 (301)
Q Consensus 87 in~----~~I~~~di~-~ng~~vVH~Id~vL~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gfs~f~ 160 (301)
+|| ++|+.+|+. +|| +||+||+||.|+.. ++.+.|+.. .|++|.
T Consensus 126 v~~g~~~a~v~~~di~~~NG--vIhvID~VL~pp~~----------------------------ti~~~l~~~~~fs~~~ 175 (324)
T 1o70_A 126 VEGGGVNATVIQADVAQTNG--YVHIIDHVLGVPYT----------------------------TVLGKLESDPMMSDTY 175 (324)
T ss_dssp EEETTEEEEEEEEEEECSSE--EEEEESSCTTSCCS----------------------------CHHHHHHHCGGGHHHH
T ss_pred EcCCceeEEEEeccccccCc--EEEEEchhhhhchh----------------------------hHHHHhhcCchHHHHH
Confidence 885 899999995 788 99999999998721 456777764 599998
Q ss_pred HHHH-HhhcccccCCCCCceEEEecCCHHHhhcc------------CCh-HHHhcccccccccC--cccccccCCCCC--
Q 042280 161 SFLE-LQLLGFSDRSGIAELTVFAPFDGVMMDYV------------GNV-SEYSSLLLRHTVPC--KISWSDLVGFDD-- 222 (301)
Q Consensus 161 ~~L~-~~l~~l~~~~~~~~~TvFAPtD~Af~~l~------------~~~-~~l~~iL~yHVvp~--~l~~~dL~~~~~-- 222 (301)
.++. +++.+..+. ..++||||||+|+||+++. .+. +.|+++|+|||+|+ .++.++|.....
T Consensus 176 ~~l~~~gl~~~L~~-~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~~~~ 254 (324)
T 1o70_A 176 KMGKFSHFNDQLNN-TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQES 254 (324)
T ss_dssp HHTTTTTTTGGGGC-SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHS
T ss_pred HHHHhhCHHHHhCC-CCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcceEcHHHHhhhccCC
Confidence 8873 334322211 2457999999999999872 122 37899999999998 677688864211
Q ss_pred C-CceeeccCCcEEEEEE--cCCCcccEEEC----cEEEeCCceeeeCCeEEEEEccccCCCCcchhhh
Q 042280 223 G-DALKTFLNGFKINVTR--SDGDDDLLMLN----GVVISSPNLYYSDWLVVHGIHEVLAVPATTKEAT 284 (301)
Q Consensus 223 g-~~l~Tll~g~~l~v~~--~~~~~~~i~VN----g~~I~~pDi~~~~~gVIHgId~VL~p~~~~~~~~ 284 (301)
+ ..++|+ . ..+.|+. .++ .++|| +++|+.+|+.+ .|||||+||+||.|++.....+
T Consensus 255 ~~~~~~Tl-~-~~l~v~~~~~~~---~v~v~~~~~~a~v~~~di~~-~NGvIHvID~VL~P~~~~~~~g 317 (324)
T 1o70_A 255 GSVILPTF-R-DSLSIRVEEEAG---RYVIIWNYKKINVYRPDVEC-TNGIIHVIDYPLLEEKDVVVAG 317 (324)
T ss_dssp SSEEEECS-S-SEEEEEEEEETT---EEEEEETTEEEEEEEEEEEE-TTEEEEEESSCSCCTTTTC---
T ss_pred Ceeeeecc-C-CcEEEEEEecCC---EEEEEecCceeEEEEccccc-CCCeEEEeceeecCCcccccCC
Confidence 1 137887 4 6777765 455 78887 79999999975 5799999999999988754433
No 2
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.89 E-value=7.6e-24 Score=174.50 Aligned_cols=120 Identities=21% Similarity=0.243 Sum_probs=96.5
Q ss_pred HHHHHHhhc-ChHHHHHHHH-HhhcccccCCCCCceEEEecCCHHHhhccC--------ChHHHhcccccccccCccccc
Q 042280 146 EASGVLRSK-GYSLMGSFLE-LQLLGFSDRSGIAELTVFAPFDGVMMDYVG--------NVSEYSSLLLRHTVPCKISWS 215 (301)
Q Consensus 146 ~~~~~L~~~-gfs~f~~~L~-~~l~~l~~~~~~~~~TvFAPtD~Af~~l~~--------~~~~l~~iL~yHVvp~~l~~~ 215 (301)
++.+.|+.. .|++|..++. +++.+..+ +.++||||||+|+||++++. +.+.|+++|+|||+|+.++.+
T Consensus 3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~--~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~ 80 (132)
T 2vxp_A 3 TVMDVLKGDNRFSMLVAAIQSAGLTETLN--REGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSG 80 (132)
T ss_dssp CHHHHHTTSTTCHHHHHHHHHHTCHHHHH--SSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCST
T ss_pred cHHHHHHcCCCHHHHHHHHHHcCcHHHHc--CCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehh
Confidence 577888864 5999999994 44433222 23579999999999999842 567788999999999998877
Q ss_pred ccCCCCCCCceeeccCCcEEEEEEcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccC
Q 042280 216 DLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLA 275 (301)
Q Consensus 216 dL~~~~~g~~l~Tll~g~~l~v~~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~ 275 (301)
++. .+..++|+ .|..|.|+..++ .++||+++|+.+|+.+ .|||||+||+||.
T Consensus 81 ~l~---~~~~~~tl-~G~~l~v~~~~~---~v~vn~a~v~~~di~a-~NGvIHvID~VLl 132 (132)
T 2vxp_A 81 GIG---ALVRLKSL-QGDKLEVSLKNN---VVSVNKEPVAEPDIMA-TNGVVHVITNVLQ 132 (132)
T ss_dssp TCS---SCEEEEBT-TSSEEEEEEETT---EEEESSCBEEEEEEEE-TTEEEEEESSCC-
T ss_pred hcc---CCceEecC-CCCEEEEEEeCC---EEEEeccEEEEcceec-CCEEEEEECcEeC
Confidence 764 46678886 788999999887 8999999999999975 5799999999984
No 3
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.89 E-value=1.2e-24 Score=180.46 Aligned_cols=122 Identities=29% Similarity=0.348 Sum_probs=96.4
Q ss_pred HHHHHHhh-cChHHHHHHHH-HhhcccccCCCCCceEEEecCCHHHhhccC----------ChHHHhcccccccccCccc
Q 042280 146 EASGVLRS-KGYSLMGSFLE-LQLLGFSDRSGIAELTVFAPFDGVMMDYVG----------NVSEYSSLLLRHTVPCKIS 213 (301)
Q Consensus 146 ~~~~~L~~-~gfs~f~~~L~-~~l~~l~~~~~~~~~TvFAPtD~Af~~l~~----------~~~~l~~iL~yHVvp~~l~ 213 (301)
++.+.|+. .+|++|..++. +++.+..+ +.+++|||||+|+||++++. +.+.|+++|+|||+|++++
T Consensus 4 ~i~~~l~~~~~~s~f~~~l~~agl~~~L~--~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~ 81 (137)
T 1w7d_A 4 DIVETATGAGSFTTLLTAAEAAGLVDTLK--GDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVM 81 (137)
T ss_dssp TTGGGGGSCSSSTTTTHHHHHTTTHHHHT--SSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCC
T ss_pred CHHHHHHhCCCHHHHHHHHHHcCCHHHHc--CCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEc
Confidence 45667764 45999999884 34432222 23579999999999999853 3466889999999999998
Q ss_pred ccccCCCCCCCceeeccCCcEEEEEEcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccCCCC
Q 042280 214 WSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPA 278 (301)
Q Consensus 214 ~~dL~~~~~g~~l~Tll~g~~l~v~~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~p~~ 278 (301)
.++|. .+..++|+ .|..|.|+..+| ++|||++|+.+|+.+ .|||||+||+||.|++
T Consensus 82 ~~~l~---~~~~~~tl-~G~~l~v~~~~g----v~vn~a~v~~~di~~-~NGvIHvID~VL~P~s 137 (137)
T 1w7d_A 82 SSDLT---EGMTAETV-EGGALTVTLEGG----PKVNGVSISQPDVDA-SNGVIHVIDGVLMPGA 137 (137)
T ss_dssp TTTSC---SSEEEECT-TSCEEEEECTTS----CEETTEECSBCCCBC-SSSEEEBCSSCCSSCC
T ss_pred HHHhc---CCCeeecc-CCceEEEEecCC----EEEeCcEEEECCeec-CCeEEEEECeeeCCCC
Confidence 88876 46678886 788999987643 999999999999975 5789999999999874
No 4
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.88 E-value=1.4e-23 Score=179.16 Aligned_cols=124 Identities=23% Similarity=0.229 Sum_probs=100.1
Q ss_pred HHHHHHHHhhc-ChHHHHHHHHHh---hccccc-CCCCCceEEEecCCHHHhhccC--------ChHHHhcccccccccC
Q 042280 144 FEEASGVLRSK-GYSLMGSFLELQ---LLGFSD-RSGIAELTVFAPFDGVMMDYVG--------NVSEYSSLLLRHTVPC 210 (301)
Q Consensus 144 ~~~~~~~L~~~-gfs~f~~~L~~~---l~~l~~-~~~~~~~TvFAPtD~Af~~l~~--------~~~~l~~iL~yHVvp~ 210 (301)
-+++.+.|+.. .|++|..+|... .+++.+ ..+.+ ||||||+|+||+++.. +.+.|+++|+|||+|+
T Consensus 27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g 105 (163)
T 1nyo_A 27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG 105 (163)
T ss_dssp HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEES
T ss_pred CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECC
Confidence 45788888855 599999998711 123322 23345 9999999999998842 3467889999999999
Q ss_pred cccccccCCCCCCCceeeccCCcEEEEEEcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccCCCC
Q 042280 211 KISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPA 278 (301)
Q Consensus 211 ~l~~~dL~~~~~g~~l~Tll~g~~l~v~~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~p~~ 278 (301)
+++.++|. | .++|+ .|+.|.|+..++ .++||+++|+.+|+.. .|||||+||+||.|++
T Consensus 106 ~~~~~~l~----g-~~~Tl-~G~~l~v~~~~~---~v~vn~a~V~~~di~a-~NGvIHvID~VL~P~~ 163 (163)
T 1nyo_A 106 QTSPANVV----G-TRQTL-QGASVTVTGQGN---SLKVGNADVVCGGVST-ANATVYMIDSVLMPPA 163 (163)
T ss_dssp CCCTTTSC----E-EEECT-TSSEEEEEECSS---CEEETTEECSSBCCCC-SSEEEBCBSSCCCCCC
T ss_pred EEcHHHhC----C-ccccC-CCCEEEEEEECC---EEEEeccEEEECceEc-CCEEEEEECcEeCCCC
Confidence 99999885 3 58886 789999999887 8999999999999975 5799999999999874
No 5
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.73 E-value=2.2e-18 Score=142.54 Aligned_cols=88 Identities=25% Similarity=0.416 Sum_probs=74.1
Q ss_pred CceEEEecCChhhhcCCCC---------C---H-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeE
Q 042280 19 PFLTIFSPSDSAFVSSGQP---------S---L-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNV 85 (301)
Q Consensus 19 ~~~TiFAPtd~Af~~~~~~---------~---~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v 85 (301)
+.+|||||+|+||.+++.. . + ++|+||+++|+++.++|.+ +..++|+ .|+.|.|+.. ++ +
T Consensus 35 ~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~~l~~---~~~~~tl-~G~~l~v~~~--~g-v 107 (137)
T 1w7d_A 35 GPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLTE---GMTAETV-EGGALTVTLE--GG-P 107 (137)
T ss_dssp SCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTTTSCS---SEEEECT-TSCEEEEECT--TS-C
T ss_pred CCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHHHhcC---CCeeecc-CCceEEEEec--CC-E
Confidence 4579999999999987532 1 2 7999999999999999875 5567776 6889999875 45 9
Q ss_pred EEeeEEEecCccc-cCCceEEEEeCCccCCC
Q 042280 86 SLKGVNLTHKPIY-NDGLLVIYGINEFFNPG 115 (301)
Q Consensus 86 ~in~~~I~~~di~-~ng~~vVH~Id~vL~P~ 115 (301)
++|+++|+.+|+. .|| +||+||+||.|+
T Consensus 108 ~vn~a~v~~~di~~~NG--vIHvID~VL~P~ 136 (137)
T 1w7d_A 108 KVNGVSISQPDVDASNG--VIHVIDGVLMPG 136 (137)
T ss_dssp EETTEECSBCCCBCSSS--EEEBCSSCCSSC
T ss_pred EEeCcEEEECCeecCCe--EEEEECeeeCCC
Confidence 9999999999995 788 999999999996
No 6
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.70 E-value=5.6e-18 Score=158.68 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=89.0
Q ss_pred cChHHHHHHHH-Hh--hcccccCCCCCceEEEecCCHHHhhcc-----CChHHHhcccccccccCcccccccCCCCCC--
Q 042280 154 KGYSLMGSFLE-LQ--LLGFSDRSGIAELTVFAPFDGVMMDYV-----GNVSEYSSLLLRHTVPCKISWSDLVGFDDG-- 223 (301)
Q Consensus 154 ~gfs~f~~~L~-~~--l~~l~~~~~~~~~TvFAPtD~Af~~l~-----~~~~~l~~iL~yHVvp~~l~~~dL~~~~~g-- 223 (301)
..|++|..+|. +. +.+..+ +.++||||||+|+||+++. .+.+.|+++|+|||+|+++..++|.....+
T Consensus 22 ~~~s~~~~~l~~ag~~l~~~L~--~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~ 99 (324)
T 1o70_A 22 GALRKFYEVIMDNGGAVLDDIN--SLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLI 99 (324)
T ss_dssp HHHHHHHHHHHHTCSHHHHHHH--TCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSC
T ss_pred CcHHHHHHHHHHHhHHHHHHHc--CCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCc
Confidence 34999988884 33 432212 2457999999999998752 356788999999999999998888753311
Q ss_pred CceeeccCCcEEEEEEcCC-CcccEEECc----EEEeCCceeeeCCeEEEEEccccCCCCc
Q 042280 224 DALKTFLNGFKINVTRSDG-DDDLLMLNG----VVISSPNLYYSDWLVVHGIHEVLAVPAT 279 (301)
Q Consensus 224 ~~l~Tll~g~~l~v~~~~~-~~~~i~VNg----~~I~~pDi~~~~~gVIHgId~VL~p~~~ 279 (301)
..++|+.++..+.+...++ ....+++|| ++|+.+|+.. +|||||+||+||.||..
T Consensus 100 ~~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~-~NGvIhvID~VL~pp~~ 159 (324)
T 1o70_A 100 AQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVPYT 159 (324)
T ss_dssp CCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSCCS
T ss_pred eEEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEeccccc-cCcEEEEEchhhhhchh
Confidence 1688974443355554321 123588985 8999999975 57999999999999874
No 7
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.68 E-value=2.5e-17 Score=135.42 Aligned_cols=87 Identities=20% Similarity=0.310 Sum_probs=71.3
Q ss_pred CceEEEecCChhhhcCCCC-------C---H-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeEEE
Q 042280 19 PFLTIFSPSDSAFVSSGQP-------S---L-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSL 87 (301)
Q Consensus 19 ~~~TiFAPtd~Af~~~~~~-------~---~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v~i 87 (301)
+.+|||||+|+||.+++.. . + ++|+||++++.+..++|.. +..++|+ .|..|.|+.. ++.+++
T Consensus 34 ~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l~~---~~~~~tl-~G~~l~v~~~--~~~v~v 107 (132)
T 2vxp_A 34 GVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGIGA---LVRLKSL-QGDKLEVSLK--NNVVSV 107 (132)
T ss_dssp CCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTCSS---CEEEEBT-TSSEEEEEEE--TTEEEE
T ss_pred CCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhccC---CceEecC-CCCEEEEEEe--CCEEEE
Confidence 3579999999999987521 1 2 7999999999998888763 4567786 6889999886 457999
Q ss_pred eeEEEecCccc-cCCceEEEEeCCccC
Q 042280 88 KGVNLTHKPIY-NDGLLVIYGINEFFN 113 (301)
Q Consensus 88 n~~~I~~~di~-~ng~~vVH~Id~vL~ 113 (301)
|+++|+.+|+. +|| |||+||+||.
T Consensus 108 n~a~v~~~di~a~NG--vIHvID~VLl 132 (132)
T 2vxp_A 108 NKEPVAEPDIMATNG--VVHVITNVLQ 132 (132)
T ss_dssp SSCBEEEEEEEETTE--EEEEESSCC-
T ss_pred eccEEEEcceecCCE--EEEEECcEeC
Confidence 99999999995 788 9999999984
No 8
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.67 E-value=2.7e-17 Score=140.15 Aligned_cols=85 Identities=20% Similarity=0.334 Sum_probs=72.6
Q ss_pred eEEEecCChhhhcCCC---------CC-H-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeEEEee
Q 042280 21 LTIFSPSDSAFVSSGQ---------PS-L-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKG 89 (301)
Q Consensus 21 ~TiFAPtd~Af~~~~~---------~~-~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v~in~ 89 (301)
+|||||+|+||.++.. .. + ++|+|||++++++.++|. + .++|+ .|+.|+|+.. ++.+++|+
T Consensus 66 ~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g~~~~~~l~----g-~~~Tl-~G~~l~v~~~--~~~v~vn~ 137 (163)
T 1nyo_A 66 YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVV----G-TRQTL-QGASVTVTGQ--GNSLKVGN 137 (163)
T ss_dssp EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCCTTTSC----E-EEECT-TSSEEEEEEC--SSCEEETT
T ss_pred cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECCEEcHHHhC----C-ccccC-CCCEEEEEEE--CCEEEEec
Confidence 8999999999998742 12 3 799999999999999985 2 57887 6889999876 45699999
Q ss_pred EEEecCccc-cCCceEEEEeCCccCCC
Q 042280 90 VNLTHKPIY-NDGLLVIYGINEFFNPG 115 (301)
Q Consensus 90 ~~I~~~di~-~ng~~vVH~Id~vL~P~ 115 (301)
++|+.+|+. .|| |||+||+||.|+
T Consensus 138 a~V~~~di~a~NG--vIHvID~VL~P~ 162 (163)
T 1nyo_A 138 ADVVCGGVSTANA--TVYMIDSVLMPP 162 (163)
T ss_dssp EECSSBCCCCSSE--EEBCBSSCCCCC
T ss_pred cEEEECceEcCCE--EEEEECcEeCCC
Confidence 999999995 787 999999999996
No 9
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=10.47 E-value=86 Score=23.63 Aligned_cols=15 Identities=33% Similarity=0.257 Sum_probs=11.8
Q ss_pred eeCCeEEEEEccccC
Q 042280 261 YSDWLVVHGIHEVLA 275 (301)
Q Consensus 261 ~~~~gVIHgId~VL~ 275 (301)
...+|+||.||.|..
T Consensus 70 E~~Gg~IHSIDEVva 84 (97)
T 2raq_A 70 ESYGGSIHSVDEVVA 84 (97)
T ss_dssp HHTTCEEEEEEEEEE
T ss_pred HHcCCeEEeeeeeee
Confidence 456899999997753
No 10
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=9.80 E-value=94 Score=23.36 Aligned_cols=15 Identities=27% Similarity=0.414 Sum_probs=11.8
Q ss_pred eeCCeEEEEEccccC
Q 042280 261 YSDWLVVHGIHEVLA 275 (301)
Q Consensus 261 ~~~~gVIHgId~VL~ 275 (301)
...+|+||.||.|..
T Consensus 69 E~~Gg~IHSIDEVva 83 (96)
T 2x3d_A 69 EEEGCAIHSIDEVVS 83 (96)
T ss_dssp HHTTCEEEEEEEEEE
T ss_pred HHcCCeEEeeeeeee
Confidence 456899999998753
Done!