BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042282
(296 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P24555|PTRB_ECOLI Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2
Length = 686
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 140/263 (53%), Gaps = 38/263 (14%)
Query: 70 YSCERKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDR 129
Y E +V+ DGV++P++++Y RK + + + L+ YG+YG +D + RLSLLDR
Sbjct: 414 YRSEHLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDR 473
Query: 130 GWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSA 189
G+V A VRGGG W++ G L K+N+ +D L+ GY A+G SA
Sbjct: 474 GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSA 533
Query: 190 GCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIR 249
G +L+G AIN P+LF I +VPF+D+ TMLD S+PLT ++EE+GNPQ +EY++
Sbjct: 534 GGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMK 593
Query: 250 SYSPYDNIPS--------------------------------------VILKTNTTGGHF 271
SYSPYDN+ + ++L T+ GH
Sbjct: 594 SYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653
Query: 272 GEGGRYSQCEETAYDYAFLMKIC 294
G+ GR+ E A +YAFL+ +
Sbjct: 654 GKSGRFKSYEGVAMEYAFLVALA 676
>sp|Q59536|PTRB_MORLA Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1
Length = 690
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 131/252 (51%), Gaps = 38/252 (15%)
Query: 82 GVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDRGWVVAFADVRGG 141
GVK+P+T +Y A + +L YG+YG D + RL LL++G V A VRGG
Sbjct: 428 GVKVPMTAVYLEGALDNGPAPLILYGYGSYGSNSDPRFDPYRLPLLEKGIVFVTAQVRGG 487
Query: 142 GGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGAAINMY 201
W++ G KRN+ D + K+L+++ Y K+ A G SAG LLVGA NM
Sbjct: 488 SEMGRGWYEDGKMQNKRNTFTDFIAAAKHLIDQNYTSPTKMAARGGSAGGLLVGAVANMA 547
Query: 202 PKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDNIP--- 258
+LF + VPF+D+ TMLD S+PLT L+++E+G+P+ Q + Y++SYSPYDN+
Sbjct: 548 GELFKVIVPAVPFVDVVTTMLDTSIPLTTLEWDEWGDPRKQEDYFYMKSYSPYDNVEAKD 607
Query: 259 -----------------------------------SVILKTNTTGGHFGEGGRYSQCEET 283
++++KTN GHFG+ GR++ +E
Sbjct: 608 YPHMYITTGINDPRVGYFEPAKWVARLRAVKTDNNTLVMKTNMGAGHFGKSGRFNHLKEA 667
Query: 284 AYDYAFLMKICG 295
A YAF++ G
Sbjct: 668 AESYAFILDKLG 679
>sp|Q32N48|PPCEL_XENLA Prolyl endopeptidase-like OS=Xenopus laevis GN=prepl PE=2 SV=1
Length = 707
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 52 DNNYQNSGLQGWKVLSRLYSCERKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAY 111
D N+ + G+ + L R E S DG +PLT+LY Q L+ YGAY
Sbjct: 409 DTNHSSDGIHQFHTL-------RLEAKSKDGTSVPLTLLYKDSEKQMRQRPLLIHVYGAY 461
Query: 112 GEVLDKGWCTDRLSLLDRGWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYL 171
G L+ + ++ L++ GW++A+ VRGGG +WH G K N + DL SC +L
Sbjct: 462 GMDLNMSFKVEKRMLVEEGWLLAYCHVRGGGELGCNWHSEGVLDKKLNGLEDLGSCISHL 521
Query: 172 VNEGYVCKDKLCAIGYSAGCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKL 231
GY SAG +L GA N P+LF A +L+ PFLD+ NTM++ SLPLT
Sbjct: 522 HGLGYSQPHYSAVEAASAGGVLAGALCNSAPRLFRAVVLEAPFLDVLNTMMNVSLPLTIE 581
Query: 232 DYEEFGNPQIQSQFE-YIRSYSPYDNI 257
+ EE+GNP ++ YI+SY PY NI
Sbjct: 582 EQEEWGNPLSDEKYHRYIKSYCPYQNI 608
>sp|Q5ZKL5|PPCEL_CHICK Prolyl endopeptidase-like OS=Gallus gallus GN=PREPL PE=2 SV=1
Length = 732
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 79 SHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDRGWVVAFADV 138
S D +P+T+ ++ + + L+ YGAYG L+ + ++L L++ GW++A+ V
Sbjct: 466 SKDETLVPITVFHNVNSKELHRKPLLVHVYGAYGIDLNMSFKEEKLMLIEEGWILAYCHV 525
Query: 139 RGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGAAI 198
RGGG WHK G K +HDL +C L G+ SAG +L GA
Sbjct: 526 RGGGELGLRWHKDGCQQNKLKGLHDLKACIMLLHELGFSQPKYTALTAVSAGGVLAGAIC 585
Query: 199 NMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQ-FEYIRSYSPYDNI 257
N P+L A +L+ PF+D+ NTM+ LPL+ + EE+GNP + +YI++Y PY NI
Sbjct: 586 NSDPELIRAVVLQAPFVDVLNTMMKTHLPLSIEEQEEWGNPLADEKCMKYIKNYCPYHNI 645
Query: 258 -----PSVIL 262
PSV +
Sbjct: 646 KPQCYPSVFI 655
>sp|Q5RAK4|PPCEL_PONAB Prolyl endopeptidase-like OS=Pongo abelii GN=PREPL PE=2 SV=2
Length = 727
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
Query: 74 RKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDRGWVV 133
R E S DG +P+T+ + + + L+Q YGAYG L + +R L+D GW++
Sbjct: 445 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVQVYGAYGIDLKMNFRPERRVLVDDGWIL 504
Query: 134 AFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLL 193
A+ VRGGG WH G K N + DL +C K L +G+ +SAG +L
Sbjct: 505 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 564
Query: 194 VGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFE-YIRSYS 252
GA N P+L A L+ PFLD+ NTM+D +LPLT + EE+GNP + + YI+ Y
Sbjct: 565 AGALCNSNPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKHYC 624
Query: 253 PYDNI 257
PY NI
Sbjct: 625 PYQNI 629
>sp|P55656|Y4SO_RHISN Uncharacterized peptidase y4sO OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01580 PE=3 SV=1
Length = 705
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 119/273 (43%), Gaps = 48/273 (17%)
Query: 69 LYSCERKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYG-EVLDK--GW---CTD 122
LY + DGV++P++I+ R + LL YG YG + L GW T
Sbjct: 431 LYEARVVMAKAEDGVEVPISIVARRDRG--EDGPVLLNVYGCYGAQSLPAFFGWPSSMTA 488
Query: 123 RLSLLDRGWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKL 182
RLSLLDRG VRGGG +WH+ + KR + DL + + LV + +D +
Sbjct: 489 RLSLLDRGVAFGIVHVRGGGELGRAWHEAATRDQKRLTHTDLIAAAECLVEHRFASRDGI 548
Query: 183 CAIGYSAGCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQ 242
G SAG V AA + P LF A + +VP DI +T LD +LP + E+G+P +
Sbjct: 549 VIEGRSAGGGTVLAAAVLRPDLFRAVLAEVPLADIIDTELDFTLPYALRETAEYGDPHLA 608
Query: 243 SQFEYIRSYSPYDNI----------------------------------------PSVIL 262
+ ++Y+RSY PY N+ P +I
Sbjct: 609 NDYQYLRSYDPYYNLTPDRRYPPTYIDAALHDSQVLYYQPARYVAQRRSKAVDRDPDLIF 668
Query: 263 KTNTTGGHFGEGGRYSQCEETAYDYAFLMKICG 295
+T GGH G EE A+ A+++ G
Sbjct: 669 RTRMIGGHMGVSHGPGVAEEAAFRMAWILHRLG 701
>sp|A5LFV8|PPCEL_MACFA Prolyl endopeptidase-like OS=Macaca fascicularis GN=PREPL PE=2 SV=1
Length = 727
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 103/193 (53%), Gaps = 6/193 (3%)
Query: 74 RKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDRGWVV 133
R E S DG +P+T+ + + + L+ YGAYG L + +R L+D GW++
Sbjct: 445 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLIHVYGAYGMDLKMNFRPERRVLVDDGWIL 504
Query: 134 AFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLL 193
A+ VRGGG WH G K N + DL +C K L +G+ +SAG +L
Sbjct: 505 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 564
Query: 194 VGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFE-YIRSYS 252
GA N P+L A L+ PFLD+ NTM+D +LPLT + EE+GNP + + YI+ Y
Sbjct: 565 AGALCNCNPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 624
Query: 253 PYDNI-----PSV 260
PY NI PSV
Sbjct: 625 PYQNIKPQHYPSV 637
>sp|Q4J6C6|PPCEL_HUMAN Prolyl endopeptidase-like OS=Homo sapiens GN=PREPL PE=1 SV=1
Length = 727
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 74 RKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDRGWVV 133
R E S DG +P+T+ + + + L+ YGAYG L + +R L+D GW++
Sbjct: 445 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL 504
Query: 134 AFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLL 193
A+ VRGGG WH G K N + DL +C K L +G+ +SAG +L
Sbjct: 505 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 564
Query: 194 VGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFE-YIRSYS 252
GA N P+L A L+ PFLD+ NTM+D +LPLT + EE+GNP + + YI+ Y
Sbjct: 565 AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 624
Query: 253 PYDNI 257
PY NI
Sbjct: 625 PYQNI 629
>sp|Q8C167|PPCEL_MOUSE Prolyl endopeptidase-like OS=Mus musculus GN=Prepl PE=2 SV=1
Length = 725
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
Query: 74 RKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDRGWVV 133
R E S DG +P+T+ + + + L+ YGAYG L + ++ L+D GW++
Sbjct: 443 RIEAKSKDGKLVPMTVFHKTDSEDLQRKPLLVHVYGAYGMDLKMNFRPEKRVLVDDGWIL 502
Query: 134 AFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLL 193
A+ VRGGG WH G K N + DL +C K L ++G+ +SAG +L
Sbjct: 503 AYCHVRGGGELGLQWHADGRLTKKLNGLADLVACIKTLHSQGFSQPSLTTLSAFSAGGVL 562
Query: 194 VGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFE-YIRSYS 252
VGA N P+L A L+ PFLD+ NTMLD +LPLT + EE+GNP + + YI+ Y
Sbjct: 563 VGALCNSKPELLRAVTLEAPFLDVLNTMLDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 622
Query: 253 PYDNI 257
P NI
Sbjct: 623 PCQNI 627
>sp|Q5HZA6|PPCEL_RAT Prolyl endopeptidase-like OS=Rattus norvegicus GN=Prepl PE=2 SV=2
Length = 726
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
Query: 74 RKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDRGWVV 133
R E S DG +P+T+ + + + L+ YGAYG L + +R L+D GW++
Sbjct: 444 RIEAKSKDGKLVPMTVFHKTDSEDLQRKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL 503
Query: 134 AFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLL 193
A+ VRGGG WH G K N + DL +C K L ++G+ +SAG +L
Sbjct: 504 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHSQGFSQPSLTTLSAFSAGGVL 563
Query: 194 VGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFE-YIRSYS 252
VGA N P+L A L+ PFLD+ NTM+D +LPLT + EE+GNP + + YI+ Y
Sbjct: 564 VGALCNSKPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 623
Query: 253 PYDNI 257
P N+
Sbjct: 624 PCQNM 628
>sp|P55627|Y4QF_RHISN Uncharacterized peptidase y4qF OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01920 PE=3 SV=1
Length = 754
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 79 SHDGVKIPLTILYSRKAWLRDQSSG---LLQAYGAYGEVLDKGWC------TDRLSLLDR 129
+ DGV++P++++ R D++S LL YG YG + T RLSLLDR
Sbjct: 472 AEDGVQVPISLVARR-----DRTSPGPVLLSVYGCYGIPRLPSFLAWPSSMTARLSLLDR 526
Query: 130 GWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSA 189
VRGGG WH + KR + DL S + L+ G+ +D + G S
Sbjct: 527 EVAFGIVHVRGGGELGRPWHDAATRDQKRITHTDLISATEGLIERGFATRDGVVIEGKSG 586
Query: 190 GCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIR 249
G V A P LF A + +VP DI +T LD ++P T + E+G+PQ ++ Y+R
Sbjct: 587 GGGTVLATAVFRPNLFRAVVAEVPLADIIDTQLDSTMPYTLKETAEYGDPQDAYEYRYLR 646
Query: 250 SYSPYDNI 257
SY PY N+
Sbjct: 647 SYDPYYNL 654
>sp|P27028|PPCE_FLAME Prolyl endopeptidase OS=Flavobacterium meningosepticum GN=f1pep1
PE=1 SV=1
Length = 705
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 70 YSCERKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDR 129
Y E+ S DG KIP+ I Y + ++ +L +YG + L + ++
Sbjct: 438 YVSEQVFYTSSDGTKIPMMISYKKGLKKDGKNPTILYSYGGFNISLQPAFSVVNAIWMEN 497
Query: 130 GWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSA 189
G + A ++RGGG WH G+ + K+N +D + G+YL GY K+ + G S
Sbjct: 498 GGIYAVPNIRGGGEYGKKWHDAGTKMQKKNVFNDFIAAGEYLQKNGYTSKEYMALSGRSN 557
Query: 190 GCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIR 249
G LLVGA + M P L A V LD+ + DY + + FEY++
Sbjct: 558 GGLLVGATMTMRPDLAKVAFPGVGVLDMLRYNKFTAGAGWAYDYGTAEDS--KEMFEYLK 615
Query: 250 SYSPYDNIPS 259
SYSP N+ +
Sbjct: 616 SYSPVHNVKA 625
>sp|P81171|Y174_RICPR Uncharacterized peptidase RP174 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP174 PE=3 SV=2
Length = 722
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 67 SRLYSCERKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLS- 125
S Y E+KE S DGVKIP I+Y + ++ LL+AYG + +V++ + + R+
Sbjct: 453 SENYVLEQKEATSFDGVKIPYFIVYKKGIKFDGKNPTLLEAYGGF-QVINSPYFS-RIKN 510
Query: 126 --LLDRGWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLC 183
+ G V A++RGGG WHK G+ ++ + +D + + L+ + + L
Sbjct: 511 EVWVKNGGVSVLANIRGGGEFGPEWHKAAQGIKRQTAFNDFFAVSEELIKQNITSPEYLG 570
Query: 184 AIGYSAGCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEF------- 236
G S G LLV A+ P+LF A +VP LD+ + Y+EF
Sbjct: 571 IKGGSNGGLLVSVAMTQRPELFGAIACEVPILDM-------------IRYKEFGAGNSWV 617
Query: 237 ---GNPQIQSQFEYIRSYSPYDNI------PSVIL 262
G+P+I + +I+ Y+P +N+ P+V++
Sbjct: 618 TEYGDPEIPNDLLHIKKYAPLENLSLTQKYPTVLI 652
>sp|Q06903|PPCE_AERHY Prolyl endopeptidase OS=Aeromonas hydrophila PE=1 SV=2
Length = 690
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 70 YSCERKEVVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDR 129
Y E++ S DG ++PL I Y + L + +L YG + L + + LD
Sbjct: 420 YVSEQRFYRSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDL 479
Query: 130 GWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSA 189
G V A A++RGGG +WH G+ + K+N D + +YL EGY D+L G S
Sbjct: 480 GGVYAVANLRGGGEYGQAWHLAGTRMNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSN 539
Query: 190 GCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIR 249
G LLVGA + P L A V LD+ + DY + ++ F+Y++
Sbjct: 540 GGLLVGAVMTQRPDLMRVACQAVGVLDMLRYHTFTAGAGWAYDYGTSADS--EAMFDYLK 597
Query: 250 SYSPYDNI------PSVILKT 264
YSP ++ PS ++ T
Sbjct: 598 GYSPLHSVRAGVSYPSTLVTT 618
>sp|P27195|PPCF_ELIMR Prolyl endopeptidase OS=Elizabethkingia miricola PE=1 SV=1
Length = 705
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Query: 70 YSCERKEVVSHDGVKIPLTILYSRKAWLRD-QSSGLLQAYGAYGEVLDKGWCTDRLSLLD 128
Y E+ S DG KIP+ I ++K +D ++ +L +YG + L + ++
Sbjct: 438 YVSEQVFYTSADGTKIPMMIS-NKKGLKKDGKNPTILYSYGGFNISLQPAFSVVNAIWME 496
Query: 129 RGWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYS 188
G + A ++RGGG WH G+ K+N +D + G+YL GY KD + G S
Sbjct: 497 NGGIYAVPNIRGGGEYGKKWHDAGTKQQKKNVFNDFIAAGEYLQKNGYTSKDYMALSGRS 556
Query: 189 AGCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYI 248
G LLVGA + M P L A V LD+ + DY + + FEY+
Sbjct: 557 NGGLLVGATMTMRPDLAKVAFPGVGVLDMLRYNKFTAGAGWAYDYGTAEDS--KEMFEYL 614
Query: 249 RSYSPYDNI 257
+SYSP N+
Sbjct: 615 KSYSPVHNV 623
>sp|Q9QUR6|PPCE_MOUSE Prolyl endopeptidase OS=Mus musculus GN=Prep PE=2 SV=1
Length = 710
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 79 SHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDR-GWVVAFAD 137
S DG KIP+ I++ + L L YG + + + RL + G V+A A+
Sbjct: 444 SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVAN 503
Query: 138 VRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGAA 197
+RGGG +WHK G K+N D +YL+ EGY +L G S G LLV A
Sbjct: 504 IRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAAC 563
Query: 198 INMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDNI 257
N P LF I +V +D+ + ++G + FE++ YSP N+
Sbjct: 564 ANQRPDLFGCVIAQVGVMDMLKFH---KFTIGHAWTTDYGCSDTKQHFEWLLKYSPLHNV 620
Query: 258 ----------PSVILKT 264
PS++L T
Sbjct: 621 KLPEADDIQYPSMLLLT 637
>sp|O70196|PPCE_RAT Prolyl endopeptidase OS=Rattus norvegicus GN=Prep PE=1 SV=1
Length = 710
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 79 SHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDR-GWVVAFAD 137
S DG KIP+ I++ + L L YG + + + RL + G V+A A+
Sbjct: 444 SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVAN 503
Query: 138 VRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGAA 197
+RGGG +WHK G K+N D +YL+ EGY +L G S G LLV A
Sbjct: 504 IRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTTSKRLTINGGSNGGLLVAAC 563
Query: 198 INMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDNI 257
N P LF I +V +D+ + ++G + FE++ YSP N+
Sbjct: 564 ANQRPDLFGCVIAQVGVMDMLKFH---KFTIGHAWTTDYGCSDSKQHFEWLLKYSPLHNV 620
Query: 258 ----------PSVILKT 264
PS++L T
Sbjct: 621 KLPEADDIQYPSMLLLT 637
>sp|P48147|PPCE_HUMAN Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 SV=2
Length = 710
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 79 SHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDR-GWVVAFAD 137
S DG KIP+ I++ + L L YG + + + RL + G ++A A+
Sbjct: 444 SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVAN 503
Query: 138 VRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGAA 197
+RGGG +WHK G K+N D +YL+ EGY +L G S G LLV A
Sbjct: 504 IRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAAC 563
Query: 198 INMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDNI 257
N P LF I +V +D+ + ++G + FE++ YSP N+
Sbjct: 564 ANQRPDLFGCVIAQVGVMDMLKFH---KYTIGHAWTTDYGCSDSKQHFEWLVKYSPLHNV 620
Query: 258 ----------PSVILKT 264
PS++L T
Sbjct: 621 KLPEADDIQYPSMLLLT 637
>sp|P23687|PPCE_PIG Prolyl endopeptidase OS=Sus scrofa GN=PREP PE=1 SV=1
Length = 710
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 79 SHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDR-GWVVAFAD 137
S DG KIP+ I++ + L L YG + + + RL + G V+A A+
Sbjct: 444 SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVAN 503
Query: 138 VRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGAA 197
+RGGG +WHK G K+N D +YL+ EGY +L G S G LLV
Sbjct: 504 IRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATC 563
Query: 198 INMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDNI 257
N P LF I +V +D+ + ++G + FE++ YSP N+
Sbjct: 564 ANQRPDLFGCVIAQVGVMDMLKFH---KYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNV 620
Query: 258 ----------PSVILKT 264
PS++L T
Sbjct: 621 KLPEADDIQYPSMLLLT 637
>sp|Q9XTA2|PPCE_BOVIN Prolyl endopeptidase OS=Bos taurus GN=PREP PE=2 SV=1
Length = 710
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 79 SHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDR-GWVVAFAD 137
S DG KIP+ I++ + L L YG + + + RL + G V+A A+
Sbjct: 444 SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVCRLIFVRHMGGVLAVAN 503
Query: 138 VRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGAA 197
+RGGG +WHK G K+N D +YL+ EGY +L G S G LLV
Sbjct: 504 IRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATC 563
Query: 198 INMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDNI 257
N P LF I +V +D+ + ++G + FE++ YSP N+
Sbjct: 564 ANQRPDLFGCVIAQVGVMDMLKFH---KYTIGHAWTTDYGCSDNKQHFEWLIKYSPLHNV 620
Query: 258 ----------PSVILKT 264
PS++L T
Sbjct: 621 KLPEADDIQYPSMLLLT 637
>sp|Q86AS5|PPCE_DICDI Prolyl endopeptidase OS=Dictyostelium discoideum GN=prep PE=1 SV=1
Length = 760
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 45 IDTQNCEDNNYQNSGLQGWKVLSRLYSCERKEVVS-HDGVKIPLTILYSRKAWLRDQSSG 103
+D++N E ++ ++G+K S Y C++ S D KIP+ I Y + D +SG
Sbjct: 465 MDSKNDELLLFKEPHIEGFK--SSDYECKQVFYESPKDKTKIPMFIAYKKTT---DITSG 519
Query: 104 ----LLQAYGAYGEVLDKGWCTDRLSLLDR-GWVVAFADVRGGGGGDSSWHKFGSGLYKR 158
+ YG + + + + L++ + A++RGGG +WH+ GS K+
Sbjct: 520 NAPTYMTGYGGFNISYTQSFSIRNIYFLNKFNGIFVIANIRGGGEYGKAWHEAGSKKNKQ 579
Query: 159 NSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGAAINMYPKLFCAAILKVPFLDIC 218
N D +YL+ E Y ++KL G S G LL+GA N P LF + V +D+
Sbjct: 580 NCFDDFIGAAEYLIKENYTNQNKLAVRGGSNGGLLMGAISNQRPDLFKCVVADVGVMDML 639
Query: 219 NTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDNIP 258
L DY NP F+ + YSP +N+P
Sbjct: 640 RFHLHTIGSNWVSDYGRSDNPD---DFDVLIKYSPLNNVP 676
>sp|P55577|Y4NA_RHISN Uncharacterized peptidase y4nA OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02410 PE=3 SV=1
Length = 726
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 34/215 (15%)
Query: 77 VVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYG--------AYGEVLDKGWCTDRLSLLD 128
S DG K+P ++ + L + +L AYG +Y VL K W L+
Sbjct: 471 ATSKDGTKVPYFLVARKDVKLDGTNPTILYAYGGFQIPMQPSYSAVLGKLW-------LE 523
Query: 129 RGWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYS 188
+G A A++RGGG WH G ++ D + + L+ + L +G S
Sbjct: 524 KGGAYALANIRGGGEFGPKWHDAGLKTNRQRVYDDFQAVAQDLIAKKVTSTPHLGIMGGS 583
Query: 189 AGCLLVGAAINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLD-----YEEFGNPQIQS 243
G LL+G + P L+ A +++VP LD+ N T++ E+G+P
Sbjct: 584 NGGLLMGVQMIQRPDLWNAVVIQVPLLDMVN--------FTRMSAGASWQAEYGSPDDPV 635
Query: 244 QFEYIRSYSPYDNI------PSVILKTNTTGGHFG 272
+ ++RS SPY N+ P +T+T G
Sbjct: 636 EGAFLRSISPYHNVKAGVAYPEPFFETSTKDDRVG 670
>sp|Q9YBQ2|APEH_AERPE Acylamino-acid-releasing enzyme OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=APE_1547.1 PE=1 SV=1
Length = 582
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 9/181 (4%)
Query: 77 VVSHDGVKIPLTILYSRKAWLRDQSSGLLQAYGAYGEVLDKGWCTDRLSLLDRGWVVAFA 136
V S DG ++P +L S +A + L+ G + E D W T SL G+ V
Sbjct: 338 VESFDGSRVPTYVLESGRAPTPGPTVVLVHG-GPFAEDSDS-WDTFAASLAAAGFHVVMP 395
Query: 137 DVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAIGYSAGCLLVGA 196
+ RG G W G + D+++ ++ G +L +GYS G +
Sbjct: 396 NYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLC 453
Query: 197 AINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDN 256
A+ M P LF A + +D M + L+ + F E +RS SP ++
Sbjct: 454 ALTMKPGLFKAGVAGASVVD-WEEMYE----LSDAAFRNFIEQLTGGSREIMRSRSPINH 508
Query: 257 I 257
+
Sbjct: 509 V 509
>sp|P34422|DPF6_CAEEL Dipeptidyl peptidase family member 6 OS=Caenorhabditis elegans
GN=dpf-6 PE=3 SV=2
Length = 740
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 36/84 (42%)
Query: 126 LLDRGWVVAFADVRGGGGGDSSWHKFGSGLYKRNSIHDLTSCGKYLVNEGYVCKDKLCAI 185
L +RG+ V + RG G G+G + R D+ ++ V++G + ++ +
Sbjct: 454 LTNRGYSVLQVNFRGSTGFGKRLTNAGNGEWGRKMHFDILDAVEFAVSKGIANRSEVAVM 513
Query: 186 GYSAGCLLVGAAINMYPKLFCAAI 209
G S G A+ P+ F +
Sbjct: 514 GGSYGGYETLVALTFTPQTFACGV 537
>sp|Q95KD5|DJC18_MACFA DnaJ homolog subfamily C member 18 OS=Macaca fascicularis
GN=DNAJC18 PE=2 SV=1
Length = 358
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 197 AINMYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDN 256
A+ +P CA F I N S P +L Y+E+G+ Q+ R Y+ Y +
Sbjct: 106 ALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPRARPYNYYRD 165
Query: 257 IPSVILKTNTT----GGHFGEGG 275
+ I + GGHF G
Sbjct: 166 FEADITPEELSNVFFGGHFPTGN 188
>sp|A2SPZ6|END4_METLZ Probable endonuclease 4 OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=nfo PE=3 SV=1
Length = 281
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 118 GWCTDRLSLLDRGWVVAFADVRGGGGGDSSWHK-FGSGLYKRNSIHDLTSCGK 169
GW D LDR V+ D++GG G H+ G G +IHD+ + K
Sbjct: 199 GWFNDEAGSLDRLKVIHLNDMKGGVGSHLDRHEHLGLGYLGEETIHDVLTFPK 251
>sp|Q9CZJ9|DJC18_MOUSE DnaJ homolog subfamily C member 18 OS=Mus musculus GN=Dnajc18 PE=2
SV=1
Length = 357
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 200 MYPKLFCAAILKVPFLDICNTMLDPSLPLTKLDYEEFGNPQIQSQFEYIRSYSPYDNIPS 259
+P CA F I N S P +L Y+E+G+ Q+ RSY Y + +
Sbjct: 109 FHPDKNCAPGATEAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTVPRARSYHYYKDFEA 168
Query: 260 VI----LKTNTTGGHFGEGG 275
I L GGHF G
Sbjct: 169 DISPEELFNVFFGGHFPSGN 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,359,300
Number of Sequences: 539616
Number of extensions: 5427101
Number of successful extensions: 10349
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 10296
Number of HSP's gapped (non-prelim): 36
length of query: 296
length of database: 191,569,459
effective HSP length: 117
effective length of query: 179
effective length of database: 128,434,387
effective search space: 22989755273
effective search space used: 22989755273
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)