BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042283
(82 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SR86|AGT23_ARATH Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial
OS=Arabidopsis thaliana GN=At3g08860 PE=2 SV=1
Length = 481
Score = 124 bits (312), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/84 (69%), Positives = 68/84 (80%), Gaps = 3/84 (3%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLR---KAETLDVMDKMKQMGVLIGKGGFYGNVFRI 57
+KY IGD RG G MLGVEFV D L+ KAETL +MD+MK+MGVL+GKGGFYGNVFRI
Sbjct: 397 NKYELIGDVRGRGLMLGVEFVKDRDLKTPAKAETLHLMDQMKEMGVLVGKGGFYGNVFRI 456
Query: 58 APPLCFTKEDANYLVDVMDCSMTK 81
PPLCFT DA++LVDVMD +M+K
Sbjct: 457 TPPLCFTLSDADFLVDVMDHAMSK 480
>sp|Q94AL9|AGT22_ARATH Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial
OS=Arabidopsis thaliana GN=AGT3 PE=2 SV=2
Length = 477
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 69/84 (82%), Gaps = 3/84 (3%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLRK---AETLDVMDKMKQMGVLIGKGGFYGNVFRI 57
+K+ IGD RG G MLGVE V+D +L+ AETL +MD+MK++GVLIGKGG++GNVFRI
Sbjct: 393 EKHEIIGDVRGRGLMLGVELVSDRKLKTPATAETLHIMDQMKELGVLIGKGGYFGNVFRI 452
Query: 58 APPLCFTKEDANYLVDVMDCSMTK 81
PPLCFTK+DA++LV+ MD SM+K
Sbjct: 453 TPPLCFTKDDADFLVEAMDYSMSK 476
>sp|Q940M2|AGT21_ARATH Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
OS=Arabidopsis thaliana GN=AGT2 PE=1 SV=1
Length = 476
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 65/83 (78%), Gaps = 3/83 (3%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLR---KAETLDVMDKMKQMGVLIGKGGFYGNVFRIA 58
++ IGD RG G M+G+E V+D + + KAET + ++++++G+L+GKGG +GNVFRI
Sbjct: 393 RHDIIGDVRGRGLMVGIELVSDRKDKTPAKAETSVLFEQLRELGILVGKGGLHGNVFRIK 452
Query: 59 PPLCFTKEDANYLVDVMDCSMTK 81
PP+CFTK+DA++LVD +D S+++
Sbjct: 453 PPMCFTKDDADFLVDALDYSISR 475
>sp|Q5E9S4|AT2L1_BOVIN Ethanolamine-phosphate phospho-lyase OS=Bos taurus GN=AGXT2L1 PE=2
SV=1
Length = 497
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRK---AETLDVMDKMKQMGVLIGKGGFYGNVFRIA 58
K+ IGD RG G +G++ V D Q R AE ++ KMK+ VL+ G + NV +I
Sbjct: 353 KHTLIGDIRGVGLFIGIDLVKDHQQRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIK 412
Query: 59 PPLCFTKEDANYLVDVMDCSMT 80
PP+CFT+EDA ++V+ +D +T
Sbjct: 413 PPMCFTEEDAKFMVEQLDGILT 434
>sp|Q17QF0|AGT2_BOVIN Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Bos taurus
GN=AGXT2 PE=2 SV=1
Length = 514
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLR----KAETLDVMDKMKQMGVLIGKGGFYGNVFR 56
D++ +GD RG G M+G+E V D + R + E + K MG+LIG+GG + FR
Sbjct: 423 DEFEIVGDVRGKGLMIGIEMVKDKESRQPLPREEVNQIHHDCKCMGLLIGRGGLFSQTFR 482
Query: 57 IAPPLCFTKEDANYLVDVMDCSMTK 81
IAP +C TK + ++ V+V ++ +
Sbjct: 483 IAPSMCITKPEVDFAVEVFRSALIQ 507
>sp|Q8BWU8|AT2L1_MOUSE Ethanolamine-phosphate phospho-lyase OS=Mus musculus GN=Agxt2l1
PE=2 SV=1
Length = 499
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRK---AETLDVMDKMKQMGVLIGKGGFYGNVFRIA 58
K+ IGD RG G +G++ V D + R AE ++ +MK GVL+ G + NV +I
Sbjct: 353 KHPLIGDIRGVGLFIGIDLVKDREKRTPATAEAQHIIYEMKGKGVLLSADGPHRNVLKIK 412
Query: 59 PPLCFTKEDANYLVDVMDCSMT 80
PP+CFT++DA +LVD +D +T
Sbjct: 413 PPMCFTEDDAKFLVDHLDGILT 434
>sp|Q5RFA3|AGT2_PONAB Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Pongo
abelii GN=AGXT2 PE=2 SV=1
Length = 514
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDS----QLRKAETLDVMDKMKQMGVLIGKGGFYGNVFR 56
D++ +GD RG G M+G+E V D L + E + + K MG+L+G+G + FR
Sbjct: 423 DEFEIVGDVRGKGLMIGIEMVQDKISRRPLPREEVNQIHEDCKHMGLLVGRGSIFSQTFR 482
Query: 57 IAPPLCFTKEDANYLVDVMDCSMTK 81
IAP +C TK + ++ V+V ++T+
Sbjct: 483 IAPSMCITKPEVDFAVEVFRSALTQ 507
>sp|Q9BYV1|AGT2_HUMAN Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo
sapiens GN=AGXT2 PE=1 SV=1
Length = 514
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDS----QLRKAETLDVMDKMKQMGVLIGKGGFYGNVFR 56
D++ +GD RG G M+G+E V D L + E + + K MG+L+G+G + FR
Sbjct: 423 DEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGRGSIFSQTFR 482
Query: 57 IAPPLCFTKEDANYLVDVMDCSMTK 81
IAP +C TK + ++ V+V ++T+
Sbjct: 483 IAPSMCITKPEVDFAVEVFRSALTQ 507
>sp|Q3UEG6|AGT2_MOUSE Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Mus
musculus GN=Agxt2 PE=2 SV=1
Length = 513
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTD----SQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFR 56
D++ +GD RG G M+G+E V D L K E + + K MG+L+G+GG + FR
Sbjct: 422 DEFDIVGDVRGKGLMVGIEMVQDKISRQPLPKTEVNQIHEDCKDMGLLVGRGGNFSQTFR 481
Query: 57 IAPPLCFTKEDANYLVDVMDCSMTK 81
I PP+C TK + ++ +V ++ +
Sbjct: 482 IVPPMCVTKMEVDFAYEVFRAALIQ 506
>sp|Q8TBG4|AT2L1_HUMAN Ethanolamine-phosphate phospho-lyase OS=Homo sapiens GN=AGXT2L1
PE=1 SV=1
Length = 499
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRK---AETLDVMDKMKQMGVLIGKGGFYGNVFRIA 58
K+ IGD RG G +G++ V D R AE ++ KMK+ VL+ G + NV +I
Sbjct: 353 KHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIK 412
Query: 59 PPLCFTKEDANYLVDVMDCSMT 80
PP+CFT+EDA ++VD +D +T
Sbjct: 413 PPMCFTEEDAKFMVDQLDRILT 434
>sp|Q64565|AGT2_RAT Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Rattus
norvegicus GN=Agxt2 PE=1 SV=2
Length = 512
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTD----SQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFR 56
D++ +GD RG G M+G+E V D L K E + + K MG+L+G+GG + FR
Sbjct: 421 DEFDIVGDVRGKGLMVGIEMVQDKISRQPLPKTEVNQIHEDCKDMGLLVGRGGNFSQTFR 480
Query: 57 IAPPLCFTKEDANYLVDVMDCSMTK 81
IAPP+ TK + ++ +V ++T+
Sbjct: 481 IAPPMRVTKLEVDFAFEVFRSALTQ 505
>sp|Q6DEB1|AT2L1_XENLA Ethanolamine-phosphate phospho-lyase OS=Xenopus laevis GN=agxt2l1
PE=2 SV=1
Length = 509
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRK---AETLDVMDKMKQMGVLIGKGGFYGNVFRIA 58
K+ IGD RG G +GV+ V D R AE ++ K+K+ +L+ G Y NV +
Sbjct: 354 KHPLIGDIRGVGLFVGVDLVKDRLFRTPATAEAQHIIYKLKEKRILLSADGPYRNVLKFK 413
Query: 59 PPLCFTKEDANYLVDVMDCSMT 80
PP+CF KEDA +VD +D +T
Sbjct: 414 PPMCFNKEDAKLVVDEIDQCLT 435
>sp|Q7SY54|AT2L1_DANRE Ethanolamine-phosphate phospho-lyase OS=Danio rerio GN=agxt2l1 PE=2
SV=1
Length = 492
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRK---AETLDVMDKMKQMGVLIGKGGFYGNVFRIA 58
++ +GD RG G +G+E V + R AE +V+ ++K+ +L+ G + NV +
Sbjct: 355 RHPLVGDVRGRGLFVGLELVRNQSKRTPATAEAQEVIYRLKEQRILLSADGPHRNVLKFK 414
Query: 59 PPLCFTKEDANYLVDVMDCSMT 80
PP+CF++EDA + V+ +D +T
Sbjct: 415 PPMCFSREDAEFAVEKIDQILT 436
>sp|P33189|YHXA_BACSU Uncharacterized aminotransferase YhxA OS=Bacillus subtilis (strain
168) GN=yhxA PE=3 SV=4
Length = 450
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRK----AETLDVMDKMKQMGVLIGKGG----FYGN 53
++ +GD RG G ++G+E V D ++ A+ V+ K+ G++IGK G Y N
Sbjct: 362 EHPAVGDVRGKGLLIGIELVKDKLTKEPADAAKVNQVVAACKEKGLIIGKNGDTVAGYNN 421
Query: 54 VFRIAPPLCFTKEDANYLV 72
V ++APP C T+ED +++V
Sbjct: 422 VIQLAPPFCLTEEDLSFIV 440
>sp|Q9VU95|AGT2L_DROME Alanine--glyoxylate aminotransferase 2-like OS=Drosophila
melanogaster GN=CG8745 PE=2 SV=2
Length = 494
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLR---KAETLDVMDKMKQMG-VLIGKGGFYGNVFRI 57
++ IGD RG G +G+E V D + R K V+++MKQ+ VL+ G NV ++
Sbjct: 366 EFECIGDVRGAGLFVGIELVQDRKERIPDKKAAHWVVNRMKQLHRVLVSSDGPNDNVIKL 425
Query: 58 APPLCFTKEDAN-YLVDVMDC 77
PP+CF +E+A+ +L+ +C
Sbjct: 426 KPPMCFNRENADEFLLGFREC 446
>sp|Q8R1K4|AT2L2_MOUSE 5-phosphohydroxy-L-lysine phospho-lyase OS=Mus musculus GN=Agxt2l2
PE=2 SV=1
Length = 467
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRKAETLD---VMDKMKQMGVLIGKGGFYGNVFRIA 58
K+ IGD RG G +GV+ + D LR T + ++ ++K+ +L+ G N+ +
Sbjct: 353 KHPIIGDVRGTGLFIGVDLIKDETLRTPATEEAEYLVSRLKENYILLSIDGPGKNILKFK 412
Query: 59 PPLCFTKEDANYLVDVMDCSMT 80
PP+CF ++A ++V +D +T
Sbjct: 413 PPMCFNVDNAQHVVAKLDDILT 434
>sp|Q8IUZ5|AT2L2_HUMAN 5-phosphohydroxy-L-lysine phospho-lyase OS=Homo sapiens GN=AGXT2L2
PE=1 SV=1
Length = 450
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRKAETLD---VMDKMKQMGVLIGKGGFYGNVFRIA 58
K+ +GD RG G +GV+ + D R T + ++ ++K+ VL+ G N+ +
Sbjct: 353 KHPIVGDVRGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFK 412
Query: 59 PPLCFTKEDANYLVDVMDCSMT 80
PP+CF+ ++A +V +D +T
Sbjct: 413 PPMCFSLDNARQVVAKLDAILT 434
>sp|P30268|Y2045_BACPE Uncharacterized aminotransferase BpOF4_10225 OS=Bacillus
pseudofirmus (strain OF4) GN=BpOF4_10225 PE=3 SV=2
Length = 445
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLRK---AETLDVMDKMKQMGVLIGKGGFYGNVFRI 57
+KY IG R G M+G+E + D Q +K A L ++D Q GVL G G V R+
Sbjct: 352 EKYEMIGSIRSVGLMIGIEII-DPQTKKPDGAAVLRILDLALQEGVLFYLCGNEGEVIRM 410
Query: 58 APPLCFTKEDANYLVDVMDCSMTK 81
PPL TKE + +D++ ++ K
Sbjct: 411 IPPLSVTKEQIDDGLDMLQRALVK 434
>sp|P91408|AGT2L_CAEEL Alanine--glyoxylate aminotransferase 2-like OS=Caenorhabditis
elegans GN=T01B11.2 PE=2 SV=1
Length = 467
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLR----KAETLDVMDKMKQMGVLIGKGGFYGNVFRI 57
K+ IGD RG G G++ V D R K ++ K G+L+ G + N+ +I
Sbjct: 381 KHECIGDIRGVGLFWGIDLVKDRNTREPDQKLAIATILALRKSYGILLNADGPHTNILKI 440
Query: 58 APPLCFTKEDANYLVDVMDCSMT 80
PPLCF + + V +D +T
Sbjct: 441 KPPLCFNENNILETVTALDQVLT 463
>sp|O27392|ARGD_METTH Acetylornithine aminotransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=argD PE=3 SV=1
Length = 390
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTK 65
+ D RG G M+G+E E V+D ++MGVLI G V RI PPL K
Sbjct: 323 VRDIRGVGLMIGIEI-------DGECAGVVDAAREMGVLINCTA--GKVIRIVPPLVIKK 373
Query: 66 EDANYLVDVM 75
E+ + VDV+
Sbjct: 374 EEIDAAVDVL 383
>sp|Q58696|BIOA_METJA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=bioA PE=3
SV=2
Length = 461
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFY---GNVFRIAPPLC 62
+GD RG GFM+G+E V D + ++ + L+ KG + GNV + PPL
Sbjct: 380 VGDVRGRGFMVGIELVKDKETKEPYPYGYKAGYRVAEKLLEKGIYMRPIGNVIILVPPLS 439
Query: 63 FTKEDANYLVDVM 75
T+++ YL D +
Sbjct: 440 ITEKEIIYLCDAL 452
>sp|Q9US34|YFZ7_SCHPO Uncharacterized aminotransferase C1039.07c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1039.07c PE=3
SV=1
Length = 448
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLRKAETL---DVMDKMKQMGV------LIGKGGFY 51
DK+ I D RG G + G+E + + K + DK ++G+ L G GG
Sbjct: 354 DKHPLIVDVRGLGLLQGIEIASCTDPSKPSDFLGTVIGDKCLELGMNCNIVHLRGIGG-- 411
Query: 52 GNVFRIAPPLCFTKEDANYLVDVMDCSMT 80
VFRIAPPL T E+ + +++ D ++T
Sbjct: 412 --VFRIAPPLTVTDEEIHKAIEIFDSALT 438
>sp|Q9APM5|TPA_BILWA Taurine--pyruvate aminotransferase OS=Bilophila wadsworthia GN=tpa
PE=1 SV=1
Length = 456
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKM----KQMGVLIGKGGF----YGN 53
K+ IGD RG G G+E V D ++ V + M KQ GVLIGK + N
Sbjct: 362 KHPIIGDVRGKGLFAGIEIVKDRATKEPIAEAVANAMVGAAKQAGVLIGKTSRSFREFNN 421
Query: 54 VFRIAPPLCFTKEDANYLVDVMDCSMT 80
+ P L T+ D + +V +D + T
Sbjct: 422 TLTLCPALIATEADIDEIVAGIDKAFT 448
>sp|P16932|DGDA_BURCE 2,2-dialkylglycine decarboxylase OS=Burkholderia cepacia GN=dgdA
PE=1 SV=3
Length = 433
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLRKAE-------TLDVMDKMKQMGVLIGKGGFYGN 53
+++ IGD RG G +LGVE V D + ++ T + M+ M ++ G G
Sbjct: 346 ERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPG--MGG 403
Query: 54 VFRIAPPLCFTKED 67
VFRIAPPL ++++
Sbjct: 404 VFRIAPPLTVSEDE 417
>sp|P22256|GABT_ECOLI 4-aminobutyrate aminotransferase GabT OS=Escherichia coli (strain
K12) GN=gabT PE=1 SV=1
Length = 426
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLRKAE---TLDVMDKMKQMGVLIGKGGFYGNVFRI 57
+K+ IGD RG G M+ +E D K + T +++ + + G+++ G Y NV RI
Sbjct: 340 EKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRI 399
Query: 58 APPLCFTKEDA 68
PL T EDA
Sbjct: 400 LVPL--TIEDA 408
>sp|P40829|GABT_MYCLE 4-aminobutyrate aminotransferase OS=Mycobacterium leprae (strain
TN) GN=gabT PE=3 SV=1
Length = 446
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETL--DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCF 63
IGD RG G M+ VE V L V GV+I G +GN+ R+ PPL
Sbjct: 368 IGDVRGRGAMIAVELVKSGTAEPDPELTEKVATAAHATGVIILTCGMFGNIIRLLPPLTI 427
Query: 64 TKE 66
+ E
Sbjct: 428 SDE 430
>sp|O34662|YODT_BACSU Uncharacterized aminotransferase YodT OS=Bacillus subtilis (strain
168) GN=yodT PE=3 SV=1
Length = 444
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 4 GTIGDARGWGFMLGVEFVTDSQLRK------AETLDVMDKMKQMGVLI--GKGGF---YG 52
G IG+ RG G +LG+EFV D + +K A T ++ + K+ G+++ K G G
Sbjct: 348 GIIGEVRGKGLLLGIEFVADQKTKKVFPPEQAITQLIVSEAKKRGLIVYPSKAGIDSGEG 407
Query: 53 NVFRIAPPLCFTKEDANYLVDV 74
+ IAPP + + L+ +
Sbjct: 408 DAVIIAPPFTISDGEMEELISI 429
>sp|Q9Z3R2|RHBA_RHIME Diaminobutyrate--2-oxoglutarate aminotransferase OS=Rhizobium
meliloti (strain 1021) GN=rhbA PE=3 SV=1
Length = 470
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAE---------TLDVMDKMKQMGVLIGKGGFYGNVFR 56
IG+ RG G MLGVE V L A + +M + G+++ GG +G+V R
Sbjct: 380 IGEVRGEGLMLGVEVVDPEGLPDALGHPPHGQEIARMIQHEMFRAGIILETGGRFGSVLR 439
Query: 57 IAPPLCFT 64
+ PPL +
Sbjct: 440 LLPPLVIS 447
>sp|Q9M8M7|ARGD_ARATH Acetylornithine aminotransferase, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=WIN1 PE=1 SV=1
Length = 457
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTK 65
+ + RG G ++GVE + ++D + G+LI G GNV RI PPL ++
Sbjct: 388 VKEVRGEGLIIGVELDVPAS-------SLVDACRDSGLLILTAG-KGNVVRIVPPLVISE 439
Query: 66 EDANYLVDVMDCSMT 80
E+ V++M ++T
Sbjct: 440 EEIERAVEIMSQNLT 454
>sp|P59316|ARGD_CHLTE Acetylornithine aminotransferase OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=argD PE=3 SV=1
Length = 400
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPP 60
+K+ I + R +G M+GV +++ E L + GVL+ NV R+ PP
Sbjct: 325 EKHAQILEIRQYGLMIGVTVHREAKYYVEEAL-------KRGVLVNATS--NNVIRLLPP 375
Query: 61 LCFTKEDANYLVDVMDCSMTKK 82
L +KE+A +D +D T++
Sbjct: 376 LSISKEEAQLCLDTLDAIFTEE 397
>sp|P53555|BIOK_BACSU L-Lysine-8-amino-7-oxononanoate aminotransferase OS=Bacillus
subtilis (strain 168) GN=bioK PE=1 SV=1
Length = 448
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLD------VMDKMKQMGVLIGKGGFYGNVFRIAP 59
+GD R GFM G E V + ++ D V KM+++G+L G+V P
Sbjct: 364 VGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRP---LGDVIAFLP 420
Query: 60 PLCFTKEDANYLVDVM 75
PL T E+ + +V +M
Sbjct: 421 PLASTAEELSEMVAIM 436
>sp|P63504|GABT_MYCTU 4-aminobutyrate aminotransferase OS=Mycobacterium tuberculosis
GN=gabT PE=3 SV=1
Length = 449
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 6 IGDARGWGFMLGVEFVTD--SQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCF 63
IGD RG G M+ VE V ++ T + GV+I G +GN+ R+ PPL
Sbjct: 371 IGDVRGRGAMIAVELVKSGTTEPDAGLTERLATAAHAAGVIILTCGMFGNIIRLLPPLTI 430
Query: 64 TKE 66
E
Sbjct: 431 GDE 433
>sp|P63505|GABT_MYCBO 4-aminobutyrate aminotransferase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=gabT PE=3 SV=1
Length = 449
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 6 IGDARGWGFMLGVEFVTD--SQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCF 63
IGD RG G M+ VE V ++ T + GV+I G +GN+ R+ PPL
Sbjct: 371 IGDVRGRGAMIAVELVKSGTTEPDAGLTERLATAAHAAGVIILTCGMFGNIIRLLPPLTI 430
Query: 64 TKE 66
E
Sbjct: 431 GDE 433
>sp|Q58131|ARGD_METJA Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=argD PE=3 SV=1
Length = 398
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 1 DKYGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPP 60
+KY I + RG G M+G E + D++ KM + G LI V R PP
Sbjct: 324 EKYNFIKEVRGLGLMIGAELEFNGA-------DIVKKMLEKGFLINCTS--DTVLRFLPP 374
Query: 61 LCFTKEDANYLVDVMDCSMTK 81
L KE + L++ +D T+
Sbjct: 375 LIVEKEHIDALINALDEVFTE 395
>sp|C5D6R2|OAT_GEOSW Ornithine aminotransferase OS=Geobacillus sp. (strain WCH70)
GN=rocD PE=3 SV=1
Length = 398
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTK 65
I + RG G +GVE T ++ +K+KQ G+L + + V R APPL TK
Sbjct: 331 IKEVRGRGLFIGVELHTSAR-------PYCEKLKQEGLLCKET--HDTVIRFAPPLVITK 381
Query: 66 EDANYLVD 73
E+ ++ ++
Sbjct: 382 EELDWAIE 389
>sp|Q53196|Y4UB_RHISN Uncharacterized aminotransferase y4uB OS=Rhizobium sp. (strain
NGR234) GN=NGR_a01380 PE=3 SV=1
Length = 467
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGV----------LIGKGGFYGNVF 55
+G+ RG G M +EFV D + +K D + ++G LI + +G++
Sbjct: 375 VGEVRGVGLMGAIEFVGDRENKKR-----FDPLLKVGARVSKAARDRGLIARAMPHGDIL 429
Query: 56 RIAPPLCFTKEDANYLV 72
APPL TKE+ + +V
Sbjct: 430 GFAPPLVTTKEEVDEIV 446
>sp|Q8CSG1|ARGD_STAES Acetylornithine aminotransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=argD PE=3 SV=2
Length = 375
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 8 DARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKED 67
+ RG G M+G+E D V+ + K+MG++I G NV R+ PPL TK+
Sbjct: 313 EVRGVGLMVGIEVTNDPS-------QVVREAKRMGLIILTAG--KNVIRLLPPLTITKKQ 363
Query: 68 ANYLVDVM 75
++++
Sbjct: 364 LEKGIEIL 371
>sp|Q5HP24|ARGD_STAEQ Acetylornithine aminotransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=argD PE=3 SV=1
Length = 375
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 8 DARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKED 67
+ RG G M+G+E D V+ + K+MG++I G NV R+ PPL TK+
Sbjct: 313 EVRGVGLMVGIEVTNDPS-------QVVREAKRMGLIILTAG--KNVIRLLPPLTITKKQ 363
Query: 68 ANYLVDVM 75
++++
Sbjct: 364 LEKGIEIL 371
>sp|P56744|DAT_ACIBA Diaminobutyrate--2-oxoglutarate aminotransferase OS=Acinetobacter
baumannii GN=dat PE=1 SV=1
Length = 445
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 17/79 (21%)
Query: 2 KYGTIGDARGWGFMLGVEFV-------------TDSQLRKAETLDVMDKMKQMGVLIGKG 48
++ IG+ RG G M+GVE V DSQL A + +L+ KG
Sbjct: 349 EFPCIGNVRGRGLMIGVEIVDERKPADRIGSHPADSQLAAA----IQTACFNNNLLLEKG 404
Query: 49 GFYGNVFRIAPPLCFTKED 67
G G V R+ PL T+E+
Sbjct: 405 GRNGTVIRLLCPLIITQEE 423
>sp|C0ZBR4|OAT_BREBN Ornithine aminotransferase OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=rocD PE=3 SV=1
Length = 399
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTK 65
I + RG G +G+E T ++ +K+K++G+L + + R APPL +K
Sbjct: 331 IKEIRGRGLFIGLELTTAAR-------PYCEKLKELGLLCKET--HETTIRFAPPLVISK 381
Query: 66 EDANYLVD 73
ED ++ +D
Sbjct: 382 EDLDWAID 389
>sp|Q75AW1|ARGD_ASHGO Acetylornithine aminotransferase, mitochondrial OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=ARG8 PE=3 SV=1
Length = 423
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPL 61
KY I + RG G ++GVEF D D++ K ++ G+LI G N RI P L
Sbjct: 349 KYPFIREIRGDGLLIGVEFTVDVS-------DIISKSRERGLLITAAG--PNTLRIIPAL 399
Query: 62 CFTKEDANYLVDVMD 76
++ +++++
Sbjct: 400 TIEEDTIRQGLEILE 414
>sp|Q7RT90|OAT_PLAYO Ornithine aminotransferase OS=Plasmodium yoelii yoelii GN=OAT PE=1
SV=1
Length = 414
Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMD---KMKQMGVLIGKGGFYGNVFRIAPPLC 62
+ D RG G + +EF K E ++V+D K+K+ G++ + R+ PPLC
Sbjct: 340 VRDVRGKGLLCAIEF-------KNELVNVLDICLKLKENGLITRD--VHDKTIRLTPPLC 390
Query: 63 FTKEDANYLVDVM 75
TKE + +++
Sbjct: 391 ITKEQLDECTEII 403
>sp|Q4XWV5|OAT_PLACH Ornithine aminotransferase OS=Plasmodium chabaudi GN=OAT PE=3 SV=1
Length = 414
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMD---KMKQMGVLIGKGGFYGNVFRIAPPLC 62
I D RG G + +EF K E ++V+D K+K+ G++ + R+ PPLC
Sbjct: 340 IRDIRGKGLLCAIEF-------KNELVNVLDICLKLKENGLITRD--VHDKTIRLTPPLC 390
Query: 63 FTKEDANYLVDVM 75
TKE + +++
Sbjct: 391 ITKEQLDECTEII 403
>sp|Q8TUE8|ARGD_METAC Acetylornithine aminotransferase OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=argD
PE=3 SV=2
Length = 395
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 8 DARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKED 67
+ RG G M+GVE K +D ++ GVL+ +V R+ PPL TKE
Sbjct: 334 EVRGKGLMIGVEI-------KYPCGKFVDFAREQGVLVNCTS--DSVLRLVPPLVITKEQ 384
Query: 68 ANYLVDVMD 76
+ +VDV++
Sbjct: 385 IDTVVDVLE 393
>sp|Q4A0N2|OAT1_STAS1 Ornithine aminotransferase 1 OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocD1
PE=3 SV=1
Length = 394
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTK 65
I + RG G +G+E +Q D ++M GVL + GN+ RIAPPL K
Sbjct: 328 IVEVRGRGLFIGIELNVAAQ-------DYCEQMINKGVLCKET--QGNIIRIAPPLVIDK 378
Query: 66 EDANYLVDVM 75
++ + ++ V+
Sbjct: 379 DEIDEVIRVI 388
>sp|P73133|ARGD_SYNY3 Acetylornithine aminotransferase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=argD PE=3 SV=1
Length = 429
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 1 DKYGTI-GDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAP 59
++Y T+ + RGWG + G+E +S L E ++ + G+L+ G V R P
Sbjct: 351 NQYPTLFTEVRGWGLINGLEISAESSLTSVE---IVKAAMEQGLLLAPAG--PKVLRFVP 405
Query: 60 PLCFTKEDANYLVDVM 75
PL T+ + V+++
Sbjct: 406 PLVVTEAEIAQAVEIL 421
>sp|Q8PX16|ARGD_METMA Acetylornithine aminotransferase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=argD PE=3 SV=1
Length = 395
Score = 36.2 bits (82), Expect = 0.066, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTK 65
I + RG G M+GVE K +D ++ GVL+ +V R+ PPL TK
Sbjct: 332 IVEVRGKGLMIGVEI-------KYPCGKFVDFAREHGVLVNCTS--DSVLRLVPPLVITK 382
Query: 66 EDANYLVDVMD 76
E + +VDV++
Sbjct: 383 EQIDSVVDVLE 393
>sp|Q59928|ARGD_STRMU Acetylornithine aminotransferase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=argD PE=3 SV=2
Length = 379
Score = 35.8 bits (81), Expect = 0.090, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 5 TIGDARGWGFMLGVEFVTD-SQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCF 63
T+ RG G+M+G+E D QL KA + G+++ G NV R+ PPL
Sbjct: 310 TVTQVRGLGYMIGIETTADLGQLVKA--------TRDRGLIVLTAG--TNVIRLLPPLTL 359
Query: 64 TKED 67
TK++
Sbjct: 360 TKDE 363
>sp|Q74CT9|BIOA_GEOSL Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM
12127 / PCA) GN=bioA PE=3 SV=1
Length = 453
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLI-----GKGGFY---GNVFRI 57
+GD R G + VE V D T + D +++GV + G F GNV I
Sbjct: 371 VGDVRQCGMIAAVELVRDRA-----TKEPFDWEERVGVRVCLEARTHGVFLRPLGNVIVI 425
Query: 58 APPLCFTKEDANYLVDVMDCSM 79
PPL T E+ ++LVD ++ S+
Sbjct: 426 FPPLAITAEEIDFLVDGLEKSI 447
>sp|Q8NYM5|OAT1_STAAW Ornithine aminotransferase 1 OS=Staphylococcus aureus (strain MW2)
GN=rocD1 PE=3 SV=1
Length = 394
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 2 KYGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPL 61
K+ +I + RG G +G+E TD+ +D++ Q G+L + + R++PPL
Sbjct: 324 KHPSIKEIRGRGLFIGIELNTDAA-------PFVDQLIQRGILCKDT--HRTIIRLSPPL 374
Query: 62 CFTKEDANYLV 72
KE+ + +V
Sbjct: 375 VIDKEEIHQIV 385
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.142 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,650,949
Number of Sequences: 539616
Number of extensions: 1057161
Number of successful extensions: 2611
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 2536
Number of HSP's gapped (non-prelim): 130
length of query: 82
length of database: 191,569,459
effective HSP length: 53
effective length of query: 29
effective length of database: 162,969,811
effective search space: 4726124519
effective search space used: 4726124519
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)