Query 042283
Match_columns 82
No_of_seqs 188 out of 1102
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:44:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042283.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042283hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4atq_A 4-aminobutyrate transam 99.8 4E-21 1.4E-25 134.8 9.4 79 3-81 374-454 (456)
2 4e3q_A Pyruvate transaminase; 99.8 2.7E-19 9.2E-24 126.1 8.7 77 2-81 385-467 (473)
3 4a0g_A Adenosylmethionine-8-am 99.5 3.2E-14 1.1E-18 105.6 8.3 77 2-81 748-827 (831)
4 3i5t_A Aminotransferase; pyrid 99.4 2.9E-13 1E-17 94.6 8.3 76 2-80 371-452 (476)
5 3hmu_A Aminotransferase, class 99.4 2.9E-13 1E-17 94.5 8.1 76 2-80 368-450 (472)
6 4a6r_A Omega transaminase; tra 99.4 2.1E-12 7.2E-17 89.4 9.0 76 2-80 366-447 (459)
7 3gju_A Putative aminotransfera 99.4 2.4E-12 8.2E-17 89.1 9.2 79 2-81 371-455 (460)
8 3oks_A 4-aminobutyrate transam 99.4 3.7E-12 1.3E-16 88.1 9.5 80 2-81 369-450 (451)
9 4ffc_A 4-aminobutyrate aminotr 99.4 3.8E-12 1.3E-16 88.2 9.0 80 2-81 367-448 (453)
10 3tfu_A Adenosylmethionine-8-am 99.3 3.2E-12 1.1E-16 88.9 7.4 72 2-81 381-452 (457)
11 3n5m_A Adenosylmethionine-8-am 99.3 1.2E-11 4E-16 85.2 10.1 80 2-81 364-451 (452)
12 3dod_A Adenosylmethionine-8-am 99.2 3.4E-11 1.2E-15 83.0 7.7 76 2-80 360-441 (448)
13 4ao9_A Beta-phenylalanine amin 99.2 2.3E-11 7.8E-16 85.5 6.8 74 2-81 364-445 (454)
14 3dxv_A Alpha-amino-epsilon-cap 99.2 2.2E-10 7.6E-15 78.3 9.6 79 3-81 343-424 (439)
15 1z7d_A Ornithine aminotransfer 99.2 1.3E-10 4.6E-15 80.0 8.0 73 2-80 355-427 (433)
16 2oat_A Ornithine aminotransfer 99.1 2.2E-10 7.5E-15 79.1 8.6 74 3-81 365-438 (439)
17 3nx3_A Acoat, acetylornithine 99.1 3.1E-10 1.1E-14 76.5 8.3 72 3-81 323-394 (395)
18 3i4j_A Aminotransferase, class 99.1 1.8E-10 6.1E-15 78.6 7.2 79 2-81 339-427 (430)
19 1ohv_A 4-aminobutyrate aminotr 99.1 1.4E-10 4.7E-15 81.0 6.7 72 3-81 398-470 (472)
20 2cjg_A L-lysine-epsilon aminot 99.1 2E-10 6.7E-15 79.4 6.8 72 3-81 375-447 (449)
21 2pb2_A Acetylornithine/succiny 99.1 3.8E-10 1.3E-14 77.3 7.8 74 3-81 344-417 (420)
22 1zod_A DGD, 2,2-dialkylglycine 99.0 1.3E-09 4.5E-14 74.3 8.8 79 3-81 348-431 (433)
23 3a8u_X Omega-amino acid--pyruv 99.0 2.6E-09 9E-14 73.3 8.5 76 3-81 371-446 (449)
24 1s0a_A Adenosylmethionine-8-am 98.8 1.2E-08 4.2E-13 69.5 7.6 71 3-81 353-423 (429)
25 2eo5_A 419AA long hypothetical 98.8 7.3E-09 2.5E-13 70.7 5.9 69 6-81 349-417 (419)
26 1sff_A 4-aminobutyrate aminotr 98.8 4.2E-08 1.4E-12 66.4 9.1 78 3-80 342-422 (426)
27 4adb_A Succinylornithine trans 98.8 2.6E-08 8.8E-13 67.0 7.5 72 4-80 327-398 (406)
28 2ord_A Acoat, acetylornithine 98.7 5.9E-08 2E-12 65.3 8.3 72 3-81 325-396 (397)
29 2yky_A Beta-transaminase; tran 98.1 2.3E-09 7.8E-14 75.4 0.0 74 2-81 378-459 (465)
30 3k28_A Glutamate-1-semialdehyd 98.7 6.2E-08 2.1E-12 66.2 6.7 75 3-81 344-426 (429)
31 3l44_A Glutamate-1-semialdehyd 98.6 1.4E-07 4.8E-12 64.3 8.0 74 3-80 347-428 (434)
32 3ruy_A Ornithine aminotransfer 98.6 1.3E-07 4.3E-12 63.5 7.4 68 4-80 325-392 (392)
33 3fq8_A Glutamate-1-semialdehyd 98.6 2E-07 6.9E-12 63.4 7.5 75 3-81 344-426 (427)
34 4e77_A Glutamate-1-semialdehyd 98.6 2.3E-07 7.8E-12 63.3 7.4 75 3-81 345-428 (429)
35 2epj_A Glutamate-1-semialdehyd 98.5 3.3E-07 1.1E-11 62.5 6.9 73 4-80 349-429 (434)
36 2e7u_A Glutamate-1-semialdehyd 98.4 5.4E-07 1.8E-11 61.3 6.6 73 3-79 344-424 (424)
37 1vef_A Acetylornithine/acetyl- 98.3 2.2E-06 7.6E-11 57.5 7.6 67 5-80 328-395 (395)
38 2eh6_A Acoat, acetylornithine 98.2 3.7E-06 1.3E-10 55.8 6.6 63 8-79 313-375 (375)
39 3kki_A CAI-1 autoinducer synth 98.2 7.3E-06 2.5E-10 55.3 7.6 68 9-81 331-403 (409)
40 2cy8_A D-phgat, D-phenylglycin 98.2 6E-06 2.1E-10 56.6 7.1 72 3-80 348-433 (453)
41 3e9k_A Kynureninase; kynurenin 98.1 7.2E-06 2.5E-10 56.4 7.0 64 9-81 396-460 (465)
42 3tqx_A 2-amino-3-ketobutyrate 98.0 2.6E-05 9E-10 51.9 7.1 67 10-81 324-395 (399)
43 3l8a_A METC, putative aminotra 97.9 1.9E-05 6.4E-10 53.6 5.9 71 4-80 344-420 (421)
44 3kgw_A Alanine-glyoxylate amin 97.9 5E-05 1.7E-09 50.3 6.8 66 11-81 318-387 (393)
45 1m32_A 2-aminoethylphosphonate 97.9 8.7E-05 3E-09 48.6 7.8 67 12-81 297-364 (366)
46 2w8t_A SPT, serine palmitoyltr 97.8 4.8E-05 1.6E-09 51.9 6.7 64 12-80 345-413 (427)
47 3a2b_A Serine palmitoyltransfe 97.8 5.6E-05 1.9E-09 50.7 6.8 67 10-81 320-391 (398)
48 3f0h_A Aminotransferase; RER07 97.8 5.7E-05 1.9E-09 50.0 6.4 51 31-81 320-373 (376)
49 3piu_A 1-aminocyclopropane-1-c 97.8 0.00018 6.2E-09 48.9 8.9 72 9-81 353-431 (435)
50 1elu_A L-cysteine/L-cystine C- 97.8 8E-05 2.7E-09 49.4 6.7 63 10-78 326-388 (390)
51 1fc4_A 2-amino-3-ketobutyrate 97.8 9E-05 3.1E-09 49.6 6.8 67 10-81 325-396 (401)
52 3f9t_A TDC, L-tyrosine decarbo 97.7 8.9E-05 3.1E-09 49.0 6.6 49 31-80 348-396 (397)
53 2zyj_A Alpha-aminodipate amino 97.7 0.00014 4.7E-09 48.8 7.4 64 11-80 322-391 (397)
54 3zrp_A Serine-pyruvate aminotr 97.7 0.00021 7.3E-09 47.1 8.1 64 11-80 297-361 (384)
55 1iay_A ACC synthase 2, 1-amino 97.7 0.00024 8.3E-09 48.1 8.5 69 12-81 352-426 (428)
56 1v72_A Aldolase; PLP-dependent 97.7 8.8E-05 3E-09 48.6 6.0 49 33-81 304-352 (356)
57 4dq6_A Putative pyridoxal phos 97.7 0.00022 7.6E-09 47.3 7.5 71 4-80 315-391 (391)
58 3ez1_A Aminotransferase MOCR f 97.6 0.00024 8.1E-09 48.0 7.4 63 11-80 343-413 (423)
59 1kmj_A Selenocysteine lyase; p 97.6 0.00071 2.4E-08 44.9 9.5 63 12-80 331-403 (406)
60 3nnk_A Ureidoglycine-glyoxylat 97.6 0.00027 9.2E-09 47.2 7.4 66 11-81 320-389 (411)
61 2dr1_A PH1308 protein, 386AA l 97.6 0.00032 1.1E-08 46.4 7.6 64 12-80 312-377 (386)
62 3ffh_A Histidinol-phosphate am 97.6 0.00044 1.5E-08 45.6 8.2 66 4-79 296-363 (363)
63 1qz9_A Kynureninase; kynurenin 97.5 0.00033 1.1E-08 47.0 7.2 60 12-81 341-401 (416)
64 1jg8_A L-ALLO-threonine aldola 97.5 0.00021 7E-09 46.9 5.9 63 12-80 282-344 (347)
65 3g7q_A Valine-pyruvate aminotr 97.5 0.00023 7.8E-09 47.8 6.2 65 11-81 337-412 (417)
66 2oqx_A Tryptophanase; lyase, p 97.5 0.00022 7.7E-09 48.7 6.2 51 31-81 374-441 (467)
67 2zc0_A Alanine glyoxylate tran 97.5 0.00019 6.6E-09 48.0 5.6 64 11-80 332-402 (407)
68 3aow_A Putative uncharacterize 97.5 0.00033 1.1E-08 48.3 6.6 63 12-80 375-443 (448)
69 1iug_A Putative aspartate amin 97.5 0.00035 1.2E-08 45.6 6.4 64 12-80 281-346 (352)
70 1yiz_A Kynurenine aminotransfe 97.5 0.00054 1.9E-08 46.3 7.4 68 12-81 344-428 (429)
71 1ax4_A Tryptophanase; tryptoph 97.5 0.00016 5.6E-09 49.4 4.8 50 31-80 373-439 (467)
72 1vp4_A Aminotransferase, putat 97.4 0.00025 8.5E-09 48.1 5.6 65 10-80 346-416 (425)
73 3euc_A Histidinol-phosphate am 97.4 0.00091 3.1E-08 44.2 8.1 68 3-81 296-367 (367)
74 3if2_A Aminotransferase; YP_26 97.4 0.0006 2.1E-08 46.3 7.3 64 11-80 363-438 (444)
75 2vi8_A Serine hydroxymethyltra 97.4 0.00047 1.6E-08 46.0 6.7 67 11-81 308-386 (405)
76 3cq5_A Histidinol-phosphate am 97.4 0.0013 4.3E-08 43.7 8.6 62 9-81 306-367 (369)
77 1t3i_A Probable cysteine desul 97.4 0.00072 2.5E-08 45.1 7.4 64 11-80 338-411 (420)
78 2dkj_A Serine hydroxymethyltra 97.4 0.00029 9.9E-09 47.0 5.3 68 10-81 308-387 (407)
79 1w23_A Phosphoserine aminotran 97.4 0.00042 1.4E-08 45.5 6.0 64 13-81 296-359 (360)
80 3ppl_A Aspartate aminotransfer 97.4 0.00062 2.1E-08 46.1 6.9 61 13-80 350-418 (427)
81 3ftb_A Histidinol-phosphate am 97.4 0.0022 7.5E-08 42.1 9.4 69 3-80 286-359 (361)
82 1bs0_A Protein (8-amino-7-oxon 97.4 0.00023 7.9E-09 47.3 4.6 63 11-78 316-383 (384)
83 2dou_A Probable N-succinyldiam 97.4 0.00066 2.2E-08 45.1 6.7 62 12-80 311-376 (376)
84 3kax_A Aminotransferase, class 97.3 0.00096 3.3E-08 44.1 7.4 71 4-80 307-383 (383)
85 3ezs_A Aminotransferase ASPB; 97.3 0.0012 4.1E-08 43.6 7.6 63 9-81 305-374 (376)
86 2x5f_A Aspartate_tyrosine_phen 97.3 0.0005 1.7E-08 46.5 5.9 60 13-81 368-428 (430)
87 2ch1_A 3-hydroxykynurenine tra 97.3 0.00081 2.8E-08 44.7 6.8 64 12-80 314-381 (396)
88 2huf_A Alanine glyoxylate amin 97.3 0.00086 2.9E-08 44.5 6.6 63 13-80 315-381 (393)
89 3d6k_A Putative aminotransfera 97.3 0.0011 3.8E-08 44.9 7.2 62 12-80 347-416 (422)
90 3nra_A Aspartate aminotransfer 97.3 0.00074 2.5E-08 45.1 6.1 72 4-81 327-404 (407)
91 1cs1_A CGS, protein (cystathio 97.3 0.0012 4.1E-08 44.2 7.1 64 9-79 293-384 (386)
92 2yrr_A Aminotransferase, class 97.3 0.0011 3.6E-08 43.2 6.7 65 12-81 285-352 (353)
93 3get_A Histidinol-phosphate am 97.2 0.0018 6.3E-08 42.6 7.9 63 9-80 302-365 (365)
94 2fyf_A PSAT, phosphoserine ami 97.2 0.0018 6.2E-08 43.4 7.9 64 13-81 332-397 (398)
95 1pff_A Methionine gamma-lyase; 97.2 0.0011 3.7E-08 43.3 6.3 62 10-79 242-331 (331)
96 2z9v_A Aspartate aminotransfer 97.2 0.0013 4.6E-08 43.6 6.9 64 12-80 302-369 (392)
97 1svv_A Threonine aldolase; str 97.2 0.0005 1.7E-08 44.9 4.6 49 33-81 307-357 (359)
98 3gbx_A Serine hydroxymethyltra 97.1 0.0016 5.3E-08 43.6 6.8 66 12-81 318-395 (420)
99 2ez2_A Beta-tyrosinase, tyrosi 97.1 0.0015 5E-08 44.6 6.8 69 13-81 342-430 (456)
100 3ke3_A Putative serine-pyruvat 97.1 0.00033 1.1E-08 47.0 3.5 46 35-80 322-374 (379)
101 3dzz_A Putative pyridoxal 5'-p 97.1 0.0019 6.5E-08 42.7 7.0 63 13-81 321-388 (391)
102 2oga_A Transaminase; PLP-depen 97.1 0.0013 4.6E-08 44.2 6.3 51 31-81 320-395 (399)
103 1xi9_A Putative transaminase; 97.1 0.0011 3.8E-08 44.5 5.8 64 13-81 334-402 (406)
104 2gb3_A Aspartate aminotransfer 97.1 0.0017 5.7E-08 43.8 6.7 61 12-80 327-400 (409)
105 1d2f_A MALY protein; aminotran 97.1 0.0024 8.1E-08 42.6 7.3 72 4-81 311-388 (390)
106 3g0t_A Putative aminotransfera 97.1 0.0014 4.7E-08 44.2 6.2 64 11-81 369-436 (437)
107 3isl_A Purine catabolism prote 97.1 0.0016 5.5E-08 43.4 6.5 65 12-81 321-389 (416)
108 1mdo_A ARNB aminotransferase; 97.1 0.0022 7.6E-08 42.6 7.1 69 10-80 293-384 (393)
109 3ele_A Amino transferase; RER0 97.1 0.0025 8.4E-08 42.5 7.3 60 13-80 333-394 (398)
110 1lc5_A COBD, L-threonine-O-3-p 97.1 0.0031 1E-07 41.7 7.7 69 3-81 287-359 (364)
111 3h14_A Aminotransferase, class 97.1 0.0021 7.3E-08 42.8 6.9 63 13-81 313-381 (391)
112 2bwn_A 5-aminolevulinate synth 97.0 0.0015 5.2E-08 43.6 5.8 64 13-81 330-399 (401)
113 3ly1_A Putative histidinol-pho 97.0 0.0047 1.6E-07 40.4 8.0 62 9-81 288-351 (354)
114 3ecd_A Serine hydroxymethyltra 97.0 0.0013 4.5E-08 44.0 5.4 67 11-81 318-396 (425)
115 1c7n_A Cystalysin; transferase 97.0 0.0025 8.5E-08 42.5 6.7 71 4-80 315-391 (399)
116 3h7f_A Serine hydroxymethyltra 97.0 0.0012 4.1E-08 45.3 5.2 50 32-81 352-413 (447)
117 3fkd_A L-threonine-O-3-phospha 97.0 0.0091 3.1E-07 39.1 9.1 69 4-81 268-341 (350)
118 1bw0_A TAT, protein (tyrosine 97.0 0.0039 1.3E-07 41.8 7.4 76 4-81 333-412 (416)
119 4hvk_A Probable cysteine desul 97.0 0.0019 6.4E-08 42.3 5.7 50 31-80 301-371 (382)
120 1eg5_A Aminotransferase; PLP-d 96.9 0.0013 4.3E-08 43.3 4.9 64 12-81 291-375 (384)
121 2o1b_A Aminotransferase, class 96.9 0.0017 5.9E-08 43.7 5.6 62 13-81 336-402 (404)
122 2r2n_A Kynurenine/alpha-aminoa 96.9 0.003 1E-07 42.8 6.8 67 10-81 350-423 (425)
123 3fdb_A Beta C-S lyase, putativ 96.9 0.0015 5.2E-08 43.1 5.1 69 6-81 301-375 (377)
124 1vjo_A Alanine--glyoxylate ami 96.9 0.0028 9.5E-08 42.1 6.3 63 13-80 327-393 (393)
125 3uwc_A Nucleotide-sugar aminot 96.9 0.0024 8.3E-08 42.1 6.0 52 31-82 295-371 (374)
126 2x5d_A Probable aminotransfera 96.9 0.0042 1.4E-07 41.8 7.2 65 13-81 328-397 (412)
127 4eb5_A Probable cysteine desul 96.8 0.0026 9E-08 41.9 5.7 62 13-80 289-371 (382)
128 2z61_A Probable aspartate amin 96.8 0.0032 1.1E-07 41.6 5.8 59 13-80 306-369 (370)
129 3cai_A Possible aminotransfera 96.7 0.0034 1.2E-07 41.8 5.8 60 13-78 335-405 (406)
130 1wyu_B Glycine dehydrogenase s 96.7 0.0044 1.5E-07 42.9 6.3 51 31-81 387-440 (474)
131 3qgu_A LL-diaminopimelate amin 96.7 0.006 2E-07 41.4 6.9 61 13-81 374-439 (449)
132 3hdo_A Histidinol-phosphate am 96.7 0.0092 3.1E-07 39.3 7.5 63 9-80 289-353 (360)
133 1gd9_A Aspartate aminotransfer 96.6 0.006 2.1E-07 40.5 6.2 63 13-81 318-385 (389)
134 1fg7_A Histidinol phosphate am 96.6 0.0092 3.1E-07 39.5 7.0 59 9-78 293-354 (356)
135 1o4s_A Aspartate aminotransfer 96.6 0.0071 2.4E-07 40.4 6.4 60 13-81 326-388 (389)
136 3jtx_A Aminotransferase; NP_28 96.6 0.0081 2.8E-07 39.9 6.6 59 13-79 326-395 (396)
137 1v2d_A Glutamine aminotransfer 96.5 0.0054 1.9E-07 40.7 5.6 58 13-81 307-370 (381)
138 3dyd_A Tyrosine aminotransfera 96.5 0.0087 3E-07 40.6 6.6 75 4-80 344-422 (427)
139 3ffr_A Phosphoserine aminotran 96.5 0.009 3.1E-07 38.9 6.4 60 13-79 300-361 (362)
140 3mad_A Sphingosine-1-phosphate 96.5 0.0042 1.4E-07 43.3 4.9 49 31-80 418-467 (514)
141 3rq1_A Aminotransferase class 96.4 0.0054 1.8E-07 41.2 5.2 47 31-81 368-414 (418)
142 1j32_A Aspartate aminotransfer 96.4 0.0068 2.3E-07 40.2 5.7 49 31-81 335-386 (388)
143 3mc6_A Sphingosine-1-phosphate 96.4 0.0038 1.3E-07 43.1 4.3 49 30-80 387-435 (497)
144 3b1d_A Betac-S lyase; HET: PLP 95.4 0.00054 1.9E-08 45.8 0.0 71 4-80 315-391 (392)
145 2bkw_A Alanine-glyoxylate amin 96.3 0.0053 1.8E-07 40.4 4.3 62 12-81 315-383 (385)
146 3dr4_A Putative perosamine syn 96.3 0.0063 2.2E-07 40.5 4.7 67 10-79 302-390 (391)
147 2qma_A Diaminobutyrate-pyruvat 96.2 0.02 6.9E-07 39.7 7.2 69 13-81 424-495 (497)
148 1wyu_A Glycine dehydrogenase ( 96.2 0.015 5.1E-07 39.6 6.4 49 31-79 386-437 (438)
149 2o0r_A RV0858C (N-succinyldiam 96.1 0.011 3.9E-07 39.6 5.2 65 12-81 315-395 (411)
150 3asa_A LL-diaminopimelate amin 96.0 0.0065 2.2E-07 40.7 3.9 63 12-81 324-392 (400)
151 1gc0_A Methionine gamma-lyase; 96.0 0.034 1.2E-06 37.4 7.4 62 10-78 308-397 (398)
152 1u08_A Hypothetical aminotrans 96.0 0.019 6.4E-07 38.1 6.1 60 13-77 319-385 (386)
153 3op7_A Aminotransferase class 96.0 0.043 1.5E-06 36.1 7.7 71 4-81 296-370 (375)
154 2c0r_A PSAT, phosphoserine ami 95.9 0.021 7.2E-07 37.5 6.0 51 30-80 309-359 (362)
155 2rfv_A Methionine gamma-lyase; 95.9 0.0049 1.7E-07 41.4 2.9 65 10-78 307-396 (398)
156 3fvs_A Kynurenine--oxoglutarat 95.9 0.026 9.1E-07 37.7 6.5 49 31-81 363-421 (422)
157 2fnu_A Aminotransferase; prote 95.9 0.018 6.3E-07 37.7 5.5 66 11-80 281-370 (375)
158 2x3l_A ORN/Lys/Arg decarboxyla 95.8 0.0051 1.8E-07 42.4 2.7 47 31-80 305-351 (446)
159 3qhx_A Cystathionine gamma-syn 95.8 0.0063 2.2E-07 41.1 3.0 66 9-80 307-392 (392)
160 3n0l_A Serine hydroxymethyltra 95.7 0.03 1E-06 37.3 6.1 51 31-81 326-388 (417)
161 1ibj_A CBL, cystathionine beta 95.7 0.0058 2E-07 42.6 2.5 64 9-81 373-461 (464)
162 1uu1_A Histidinol-phosphate am 95.5 0.033 1.1E-06 36.3 5.7 56 11-78 279-334 (335)
163 1e5e_A MGL, methionine gamma-l 95.5 0.036 1.2E-06 37.5 6.0 61 9-80 305-393 (404)
164 3b46_A Aminotransferase BNA3; 95.5 0.034 1.2E-06 37.9 5.9 66 10-77 357-442 (447)
165 3lvm_A Cysteine desulfurase; s 95.5 0.045 1.5E-06 36.5 6.3 29 52-80 369-397 (423)
166 3vax_A Putative uncharacterize 95.5 0.0041 1.4E-07 41.3 1.2 62 13-81 316-399 (400)
167 3e77_A Phosphoserine aminotran 95.5 0.035 1.2E-06 37.9 5.8 68 13-81 307-374 (377)
168 2e7j_A SEP-tRNA:Cys-tRNA synth 95.3 0.0041 1.4E-07 40.8 0.8 62 12-81 299-369 (371)
169 3qm2_A Phosphoserine aminotran 95.2 0.049 1.7E-06 37.2 5.9 49 32-80 335-383 (386)
170 1b5p_A Protein (aspartate amin 95.2 0.034 1.2E-06 37.0 4.8 49 31-81 334-384 (385)
171 3m5u_A Phosphoserine aminotran 94.9 0.069 2.4E-06 36.2 5.9 49 32-80 310-358 (361)
172 3t18_A Aminotransferase class 94.9 0.036 1.2E-06 37.1 4.5 43 31-80 366-408 (413)
173 2jis_A Cysteine sulfinic acid 94.8 0.062 2.1E-06 37.5 5.7 49 33-81 462-514 (515)
174 3ndn_A O-succinylhomoserine su 94.7 0.013 4.5E-07 40.1 2.0 72 7-80 320-414 (414)
175 1c4k_A Protein (ornithine deca 94.7 0.078 2.7E-06 39.2 6.1 49 30-80 516-564 (730)
176 3p1t_A Putative histidinol-pho 94.7 0.093 3.2E-06 33.9 6.0 47 32-81 288-336 (337)
177 3bwn_A AT1G70560, L-tryptophan 94.7 0.067 2.3E-06 35.9 5.4 60 12-81 324-386 (391)
178 3ei9_A LL-diaminopimelate amin 94.7 0.12 4.2E-06 34.7 6.6 59 12-78 361-424 (432)
179 2c81_A Glutamine-2-deoxy-scyll 94.6 0.095 3.3E-06 35.2 6.0 29 53-81 384-413 (418)
180 2okj_A Glutamate decarboxylase 94.6 0.089 3.1E-06 36.5 6.0 51 31-81 447-501 (504)
181 3e2y_A Kynurenine-oxoglutarate 94.4 0.17 5.8E-06 33.5 6.8 66 10-77 327-408 (410)
182 2ctz_A O-acetyl-L-homoserine s 94.2 0.011 3.9E-07 40.2 0.7 63 10-80 334-421 (421)
183 2cb1_A O-acetyl homoserine sul 94.2 0.26 9E-06 33.2 7.5 59 10-77 325-411 (412)
184 3pj0_A LMO0305 protein; struct 94.2 0.047 1.6E-06 35.7 3.7 49 31-79 304-359 (359)
185 3a9z_A Selenocysteine lyase; P 93.7 0.083 2.8E-06 35.5 4.2 29 52-80 398-426 (432)
186 3nmy_A Xometc, cystathionine g 93.6 0.039 1.3E-06 37.6 2.5 26 10-39 310-335 (400)
187 3hbx_A GAD 1, glutamate decarb 93.6 0.2 6.7E-06 35.0 6.1 50 31-80 388-442 (502)
188 1rv3_A Serine hydroxymethyltra 93.6 0.12 4.1E-06 35.9 4.9 50 31-80 369-429 (483)
189 2hox_A ALLIIN lyase 1; cystein 93.5 0.22 7.7E-06 33.9 6.1 61 13-82 361-425 (427)
190 2po3_A 4-dehydrase; external a 93.4 0.2 6.8E-06 33.7 5.7 64 14-80 297-384 (424)
191 2q7w_A Aspartate aminotransfer 93.3 0.045 1.6E-06 36.2 2.4 40 33-79 357-396 (396)
192 3lws_A Aromatic amino acid bet 93.0 0.17 5.7E-06 33.0 4.7 66 12-80 286-357 (357)
193 3frk_A QDTB; aminotransferase, 93.0 0.14 4.8E-06 33.7 4.4 50 31-80 292-366 (373)
194 1ajs_A Aspartate aminotransfer 92.9 0.067 2.3E-06 35.7 2.8 42 33-81 369-410 (412)
195 3cog_A Cystathionine gamma-lya 92.9 0.48 1.6E-05 32.0 7.0 65 9-80 308-400 (403)
196 2zy4_A L-aspartate beta-decarb 92.9 0.35 1.2E-05 34.3 6.5 47 33-80 471-520 (546)
197 2dgk_A GAD-beta, GADB, glutama 92.7 0.37 1.3E-05 32.8 6.3 50 31-80 378-432 (452)
198 2ay1_A Aroat, aromatic amino a 92.7 0.076 2.6E-06 35.2 2.8 39 33-78 354-392 (394)
199 1b9h_A AHBA synthase, protein 92.2 0.41 1.4E-05 31.6 5.9 68 11-81 288-387 (388)
200 3fsl_A Aromatic-amino-acid ami 92.1 0.12 4.2E-06 34.1 3.2 40 33-79 358-397 (397)
201 3acz_A Methionine gamma-lyase; 91.4 0.93 3.2E-05 30.3 6.9 60 10-81 301-388 (389)
202 2z67_A O-phosphoseryl-tRNA(SEC 91.3 0.53 1.8E-05 32.2 5.8 49 31-79 394-455 (456)
203 4f4e_A Aromatic-amino-acid ami 91.3 0.18 6.1E-06 33.9 3.4 41 33-80 380-420 (420)
204 3bb8_A CDP-4-keto-6-deoxy-D-gl 91.3 0.31 1.1E-05 33.0 4.6 51 31-81 359-435 (437)
205 3tcm_A Alanine aminotransferas 91.0 0.27 9.1E-06 34.2 4.1 44 35-80 444-492 (500)
206 1o69_A Aminotransferase; struc 90.7 0.61 2.1E-05 31.0 5.5 51 30-80 313-385 (394)
207 2aeu_A Hypothetical protein MJ 90.1 0.2 6.8E-06 33.5 2.7 48 34-81 318-370 (374)
208 3f6t_A Aspartate aminotransfer 90.1 0.82 2.8E-05 32.1 6.0 48 33-81 473-524 (533)
209 2a7v_A Serine hydroxymethyltra 89.4 0.73 2.5E-05 32.5 5.2 50 31-80 379-439 (490)
210 2vyc_A Biodegradative arginine 89.0 0.46 1.6E-05 35.2 4.1 47 31-79 556-602 (755)
211 1yaa_A Aspartate aminotransfer 89.0 0.21 7.1E-06 33.3 2.1 41 33-80 369-409 (412)
212 3ihj_A Alanine aminotransferas 88.8 0.89 3E-05 31.6 5.3 44 35-80 443-491 (498)
213 4e1o_A HDC, histidine decarbox 86.4 1.8 6.2E-05 29.8 5.7 51 30-80 423-476 (481)
214 3k40_A Aromatic-L-amino-acid d 86.2 1.5 5.3E-05 30.2 5.3 51 30-80 416-469 (475)
215 1js3_A DDC;, DOPA decarboxylas 83.9 2.7 9.2E-05 28.8 5.6 51 30-80 419-472 (486)
216 3ri6_A O-acetylhomoserine sulf 83.6 0.42 1.4E-05 32.9 1.4 20 61-80 411-430 (430)
217 3vp6_A Glutamate decarboxylase 83.0 3.4 0.00012 28.8 5.9 49 31-79 450-502 (511)
218 1qgn_A Protein (cystathionine 83.0 0.8 2.7E-05 31.7 2.7 66 8-81 354-444 (445)
219 2fqm_A Phosphoprotein, P prote 80.8 2.9 9.8E-05 22.1 3.7 30 51-80 16-45 (75)
220 1ayg_A Cytochrome C-552; elect 78.6 2.2 7.6E-05 21.9 3.0 21 57-77 58-78 (80)
221 4h51_A Aspartate aminotransfer 78.4 4.7 0.00016 27.7 5.3 40 35-81 377-416 (420)
222 1cch_A Cytochrome C551; electr 77.7 2.3 7.8E-05 21.7 2.8 21 57-77 60-80 (82)
223 2exv_A Cytochrome C-551; alpha 77.6 1.9 6.3E-05 22.1 2.4 20 57-76 60-79 (82)
224 1n8p_A Cystathionine gamma-lya 76.7 4.5 0.00016 27.0 4.7 28 52-79 365-392 (393)
225 3fxd_A Protein ICMQ; helix bun 76.3 2.5 8.4E-05 21.4 2.5 19 63-81 5-23 (57)
226 4eu1_A Mitochondrial aspartate 73.3 3.3 0.00011 27.4 3.4 40 34-80 369-409 (409)
227 1gks_A Cytochrome C551; haloph 72.9 2.3 7.9E-05 21.8 2.0 21 57-77 54-76 (78)
228 3b8x_A WBDK, pyridoxamine 5-ph 72.8 8.7 0.0003 25.2 5.3 45 31-75 318-389 (390)
229 3nyt_A Aminotransferase WBPE; 72.0 3.8 0.00013 26.8 3.3 47 31-77 291-359 (367)
230 1gdv_A Cytochrome C6; RED ALGA 71.3 4.4 0.00015 20.6 3.0 22 57-78 57-80 (85)
231 3dr0_A Cytochrome C6; photosyn 69.9 4.8 0.00017 20.7 3.0 22 57-78 64-87 (93)
232 1a56_A C-551, ferricytochrome 69.8 3.3 0.00011 21.2 2.2 22 56-77 57-79 (81)
233 7aat_A Aspartate aminotransfer 69.6 4 0.00014 26.8 3.1 40 34-80 362-401 (401)
234 3ph2_B Cytochrome C6; photosyn 69.5 5.1 0.00017 20.4 3.0 21 57-77 58-80 (86)
235 2d0s_A Cytochrome C, cytochrom 69.1 4.4 0.00015 20.6 2.6 20 57-76 56-76 (79)
236 2zxy_A Cytochrome C552, cytoch 67.6 3 0.0001 21.3 1.8 21 56-76 59-84 (87)
237 3n75_A LDC, lysine decarboxyla 67.2 15 0.00051 27.2 5.9 46 31-78 511-556 (715)
238 2zon_G Cytochrome C551; nitrit 66.8 5.5 0.00019 20.5 2.8 21 57-77 61-84 (87)
239 3ju7_A Putative PLP-dependent 66.7 6.2 0.00021 26.2 3.6 51 31-81 301-374 (377)
240 3cu4_A Cytochrome C family pro 66.6 5.6 0.00019 20.4 2.8 21 57-77 59-82 (85)
241 1c6r_A Cytochrome C6; electron 65.0 7 0.00024 20.1 3.0 22 57-78 60-83 (89)
242 1cyi_A Cytochrome C6, cytochro 64.8 7.1 0.00024 20.1 3.0 22 57-78 59-82 (90)
243 3meb_A Aspartate aminotransfer 64.4 7.8 0.00027 26.2 3.8 41 34-80 401-442 (448)
244 1ls9_A Cytochrome C6; omega lo 63.9 7.5 0.00026 20.1 3.0 22 57-78 62-85 (91)
245 2l4d_A SCO1/SENC family protei 63.9 6.7 0.00023 21.0 2.8 21 57-77 75-95 (110)
246 1f1f_A Cytochrome C6; heme, pr 63.8 7.6 0.00026 19.9 3.0 22 57-78 61-84 (89)
247 3t8r_A Staphylococcus aureus C 63.6 19 0.00066 20.8 5.2 45 29-73 43-87 (143)
248 3lwf_A LIN1550 protein, putati 63.1 19 0.00065 21.5 5.0 44 29-72 59-102 (159)
249 1cc5_A Cytochrome C5; electron 62.8 7.5 0.00026 20.2 2.8 20 57-76 58-81 (83)
250 3dmi_A Cytochrome C6; electron 61.4 9 0.00031 19.5 3.0 22 57-78 59-82 (88)
251 2k6x_A Sigma-A, RNA polymerase 60.4 2.7 9.1E-05 21.9 0.7 42 31-77 11-54 (72)
252 1dlw_A Hemoglobin; oxygen stor 58.9 8.9 0.00031 21.2 2.8 25 57-81 67-91 (116)
253 2y75_A HTH-type transcriptiona 58.8 22 0.00074 19.9 5.2 44 29-72 41-84 (129)
254 1kx2_A Mono-heme C-type cytoch 58.3 7.2 0.00024 20.0 2.2 20 57-76 55-78 (81)
255 1c75_A Cytochrome C-553; heme, 57.4 9.2 0.00031 18.9 2.5 20 57-76 49-68 (71)
256 1wve_C 4-cresol dehydrogenase 56.5 12 0.00042 19.0 3.0 21 57-77 49-72 (80)
257 2bmm_A Thermostable hemoglobin 56.2 10 0.00036 21.2 2.8 25 57-81 72-96 (123)
258 3aq9_A Group 1 truncated hemog 56.0 11 0.00036 21.1 2.8 30 52-81 66-96 (121)
259 3oq2_A Crispr-associated prote 55.8 24 0.00083 19.5 5.1 43 29-80 25-67 (103)
260 1uw4_A UPF3X; nonsense mediate 55.6 13 0.00045 20.3 3.0 19 54-73 5-23 (91)
261 2h36_X ORF14, hypothetical pro 55.6 3.3 0.00011 23.9 0.5 36 31-73 23-58 (112)
262 1f1c_A Cytochrome C549; dimeri 54.2 10 0.00036 20.9 2.6 21 57-77 98-119 (129)
263 1g2c_B Fusion protein (F); mem 53.5 17 0.00059 17.2 2.8 22 59-80 3-24 (43)
264 1xd7_A YWNA; structural genomi 53.4 23 0.00079 20.4 4.1 44 29-73 38-81 (145)
265 2xyk_A 2-ON-2 hemoglobin; oxyg 52.7 13 0.00043 21.4 2.8 26 56-81 78-103 (133)
266 3a9f_A Cytochrome C; alpha hel 52.1 14 0.00047 20.2 2.8 23 55-77 68-90 (92)
267 1ux8_A YJBI protein; oxygen st 51.8 13 0.00046 21.2 2.8 24 58-81 76-99 (132)
268 2bkm_A Truncated hemoglobin fr 51.7 13 0.00046 20.9 2.8 24 58-81 75-98 (128)
269 1vgj_A Hypothetical protein PH 51.7 34 0.0012 20.0 5.7 64 14-80 3-66 (184)
270 2gkm_A TRHBN, hemoglobin-like 51.4 14 0.00046 21.3 2.8 31 51-81 73-104 (136)
271 3o0r_C Nitric oxide reductase 50.8 15 0.00052 20.8 3.0 21 57-77 111-131 (146)
272 1c52_A Cytochrome-C552; electr 50.8 18 0.00062 20.3 3.3 23 56-78 67-90 (131)
273 3cp5_A Cytochrome C; electron 50.6 15 0.00051 20.1 2.8 21 57-77 99-119 (124)
274 1c53_A Cytochrome C553; electr 50.2 7.2 0.00025 19.8 1.3 21 56-76 55-77 (79)
275 3aq2_A 6B protein; miRNA machi 49.8 27 0.00093 21.9 4.0 42 33-74 73-114 (207)
276 3hl2_A O-phosphoseryl-tRNA(SEC 49.6 23 0.00079 25.4 4.1 29 52-80 431-459 (501)
277 2qrw_A Hemoglobin-like protein 49.2 18 0.00063 20.3 3.1 23 57-79 74-96 (128)
278 3k69_A Putative transcription 48.2 18 0.00062 21.5 3.1 45 29-73 43-87 (162)
279 1ylf_A RRF2 family protein; st 48.0 38 0.0013 19.5 4.5 43 29-72 45-87 (149)
280 2ce0_A Cytochrome C6; chloropl 47.8 19 0.00064 18.9 2.9 17 62-78 78-94 (105)
281 3u02_A Putative transcription- 47.4 37 0.0013 22.1 4.6 48 29-80 20-81 (252)
282 3dp5_A OMCF, cytochrome C fami 46.6 16 0.00056 19.4 2.5 22 57-78 73-97 (99)
283 1cno_A Cytochrome C552; electr 45.8 8.9 0.0003 19.8 1.3 21 57-77 59-81 (87)
284 3lyh_A Cobalamin (vitamin B12) 45.4 36 0.0012 18.9 4.0 29 53-81 95-123 (126)
285 1w2l_A Cytochrome oxidase subu 44.0 19 0.00063 18.7 2.4 20 57-76 75-96 (99)
286 2zzs_A Cytochrome C554; C-type 43.2 10 0.00035 20.1 1.3 21 57-77 79-101 (103)
287 1ow1_A Smart/HDAC1 associated 41.9 32 0.0011 21.6 3.5 49 32-80 128-182 (195)
288 3pm7_A Uncharacterized protein 41.7 15 0.00051 19.8 1.7 22 59-80 53-74 (80)
289 2xws_A Sirohydrochlorin cobalt 41.4 17 0.00059 20.3 2.1 28 53-80 100-127 (133)
290 3tvk_A DGC, diguanylate cyclas 41.2 48 0.0017 19.8 4.3 43 34-80 67-109 (179)
291 2kjw_A TS9, 30S ribosomal prot 40.6 45 0.0016 18.3 3.7 28 53-81 47-74 (96)
292 3ign_A Diguanylate cyclase; gg 40.1 51 0.0017 18.7 4.3 37 40-81 79-116 (177)
293 2xwp_A Sirohydrochlorin cobalt 39.5 25 0.00087 22.4 2.9 28 53-80 105-132 (264)
294 3k7y_A Aspartate aminotransfer 38.5 24 0.00082 23.8 2.8 39 36-81 366-404 (405)
295 1wih_A Mitochondrial ribosome 38.3 41 0.0014 18.1 3.2 33 30-63 46-79 (84)
296 4f87_A Plycb; lysin, bacteriop 37.9 4.7 0.00016 20.6 -0.6 19 57-75 52-70 (72)
297 2c1d_B SOXX; sulfur oxidation, 36.7 30 0.001 19.4 2.7 15 62-76 119-133 (137)
298 3bc8_A O-phosphoseryl-tRNA(SEC 36.4 58 0.002 22.8 4.5 30 51-80 412-441 (450)
299 3hva_A Protein FIMX; ggdef dig 36.0 60 0.0021 18.3 6.6 43 33-80 77-120 (177)
300 2hj1_A Hypothetical protein; s 35.9 21 0.0007 19.8 1.8 21 50-70 75-95 (97)
301 2ksc_A Cyanoglobin; hemeprotei 35.5 21 0.00073 19.9 1.9 35 47-81 57-96 (123)
302 3ayh_A DNA-directed RNA polyme 35.4 9.4 0.00032 22.4 0.3 15 64-78 120-134 (136)
303 2dt9_A Aspartokinase; protein- 35.4 29 0.00098 20.4 2.5 48 29-80 110-157 (167)
304 3ohe_A Histidine triad (HIT) p 34.6 37 0.0013 19.5 2.9 23 59-81 113-135 (137)
305 1dly_A Hemoglobin; oxygen stor 34.4 35 0.0012 20.4 2.8 31 51-81 103-136 (164)
306 3hvw_A Diguanylate-cyclase (DG 34.2 49 0.0017 19.0 3.4 40 36-80 66-105 (176)
307 1w5c_T Cytochrome C-550; photo 34.0 31 0.0011 20.1 2.5 21 57-77 126-147 (163)
308 2l08_A Regulator of nonsense t 33.9 7.8 0.00027 21.7 -0.2 17 54-71 13-29 (97)
309 3eye_A PTS system N-acetylgala 33.7 80 0.0027 19.1 4.7 42 36-77 95-141 (168)
310 1zyi_A Methylosome subunit pic 33.6 51 0.0017 20.1 3.5 21 55-78 119-139 (171)
311 3ff5_A PEX14P, peroxisomal bio 33.4 30 0.001 17.2 2.0 12 62-73 41-52 (54)
312 2p10_A MLL9387 protein; putati 33.0 1.1E+02 0.0037 20.3 6.2 33 32-64 153-196 (286)
313 2xvy_A Chelatase, putative; me 32.9 52 0.0018 20.7 3.6 28 53-80 113-140 (269)
314 2c35_A Human RPB4, DNA-directe 32.7 26 0.0009 20.9 2.0 22 57-78 124-147 (152)
315 2rdq_A 1-deoxypentalenic acid 32.4 77 0.0026 19.9 4.4 35 33-80 23-57 (288)
316 1mz4_A Cytochrome C550; PSII a 32.0 36 0.0012 19.0 2.5 21 57-77 100-121 (137)
317 2l2l_B Methyl-CPG-binding doma 31.8 42 0.0014 15.3 2.7 15 59-73 3-17 (36)
318 2cu1_A Mitogen-activated prote 31.4 33 0.0011 19.3 2.1 17 62-78 58-74 (103)
319 4b0t_A PUP--protein ligase; pu 31.2 1.5E+02 0.005 21.3 6.3 49 30-78 421-476 (493)
320 2ig3_A Group III truncated hae 31.0 26 0.0009 20.0 1.8 40 42-81 56-96 (127)
321 3lfj_A Manxb, phosphotransfera 31.0 95 0.0033 19.1 5.0 42 36-77 111-157 (187)
322 3m91_B Prokaryotic ubiquitin-l 30.9 45 0.0015 15.8 2.3 17 64-80 12-28 (44)
323 3cmq_A Phenylalanyl-tRNA synth 30.8 26 0.00089 24.2 2.0 22 60-81 386-407 (415)
324 2ook_A Hypothetical protein; s 30.7 47 0.0016 18.7 2.9 30 52-81 19-48 (127)
325 2opw_A Phyhd1 protein; double- 30.5 1E+02 0.0035 19.3 4.7 36 33-81 7-42 (291)
326 3r6f_A HIT family protein; str 30.0 60 0.0021 18.3 3.3 19 62-80 116-134 (135)
327 4ayb_F DNA-directed RNA polyme 29.8 13 0.00043 21.1 0.3 52 29-80 50-112 (113)
328 2jrh_A Mitogen-activated prote 29.8 40 0.0014 18.6 2.3 19 62-80 54-72 (94)
329 1iuh_A 2'-5' RNA ligase; riken 29.7 50 0.0017 19.8 3.0 28 52-79 37-64 (198)
330 1tjn_A Sirohydrochlorin cobalt 29.6 34 0.0012 20.0 2.2 27 54-80 122-148 (156)
331 3i24_A HIT family hydrolase; s 29.5 62 0.0021 18.9 3.3 22 60-81 114-135 (149)
332 3ksv_A Uncharacterized protein 29.3 61 0.0021 18.8 3.3 22 60-81 127-148 (149)
333 3acd_A Hypoxanthine-guanine ph 28.8 49 0.0017 20.0 2.8 21 60-80 11-31 (181)
334 1s69_A Cyanoglobin, hemoglobin 28.6 32 0.0011 19.1 1.9 30 52-81 63-97 (124)
335 2q3l_A Uncharacterized protein 28.4 47 0.0016 18.7 2.6 30 52-81 19-48 (126)
336 3lqv_P Splicing factor 3B subu 28.3 15 0.00052 17.1 0.3 10 63-72 23-32 (39)
337 3p3v_A PTS system, N-acetylgal 28.0 1E+02 0.0035 18.5 4.7 41 36-76 92-137 (163)
338 2fq6_A Cystathionine beta-lyas 27.7 49 0.0017 22.3 2.9 27 52-78 388-414 (415)
339 3zzp_A TS9, ribosomal protein 27.2 57 0.0019 17.1 2.6 64 12-81 4-74 (77)
340 2re1_A Aspartokinase, alpha an 27.1 37 0.0013 20.0 2.0 48 29-80 118-165 (167)
341 2gc4_D Cytochrome C-L; electro 26.5 60 0.002 18.4 2.8 21 57-77 100-122 (147)
342 4go7_X Aspartokinase; transfer 26.5 89 0.003 19.3 3.8 49 28-80 129-177 (200)
343 3s1t_A Aspartokinase; ACT doma 26.2 77 0.0026 19.0 3.4 49 28-80 110-158 (181)
344 3iyd_F RNA polymerase sigma fa 26.0 14 0.00049 26.7 0.0 42 31-77 9-50 (613)
345 4h62_V Mediator of RNA polymer 25.8 49 0.0017 14.1 3.0 13 63-75 9-21 (31)
346 3cuq_A Vacuolar-sorting protei 25.8 1.2E+02 0.0042 19.4 4.4 35 30-64 184-218 (234)
347 2c60_A Human mitogen-activated 25.7 46 0.0016 18.9 2.1 18 63-80 82-99 (111)
348 3u5c_Z RP45, S31, YS23, 40S ri 25.7 61 0.0021 18.4 2.6 28 29-56 74-101 (108)
349 3p9n_A Possible methyltransfer 25.7 86 0.0029 18.1 3.5 30 51-80 113-144 (189)
350 1b7y_B Phers, protein (phenyla 25.2 58 0.002 24.5 3.1 28 55-82 747-775 (785)
351 1u5t_A Appears to BE functiona 25.1 1.2E+02 0.0041 19.4 4.2 36 29-64 196-231 (233)
352 3kfu_G Glutamyl-tRNA(Gln) amid 25.0 78 0.0027 17.0 3.0 20 61-80 20-39 (92)
353 2lxi_A RNA-binding protein 10; 25.0 59 0.002 16.8 2.4 18 59-76 9-26 (91)
354 3h0l_C Glutamyl-tRNA(Gln) amid 24.9 78 0.0027 17.0 3.0 20 61-80 16-35 (94)
355 1ov9_A VICH protein; dimer, he 24.7 51 0.0018 15.9 1.9 19 63-81 20-38 (50)
356 1xw3_A Sulfiredoxin; retroredu 24.7 70 0.0024 18.0 2.8 24 53-77 21-44 (110)
357 2wuj_A Septum site-determining 24.3 50 0.0017 16.2 1.9 19 62-80 19-37 (57)
358 2xzm_8 RPS25E,; ribosome, tran 24.1 79 0.0027 18.8 3.0 23 29-51 78-100 (143)
359 2pg9_A Phosphomevalonate kinas 24.0 1.3E+02 0.0046 19.6 4.5 43 31-77 276-320 (337)
360 1wol_A ST0689, 122AA long cons 23.6 78 0.0027 17.4 2.9 23 58-80 93-115 (122)
361 2npt_B Mitogen-activated prote 23.6 55 0.0019 18.3 2.1 18 62-79 70-87 (100)
362 1r6n_A HPV11 E2 TAD, HPV11 reg 23.1 46 0.0016 21.2 1.9 33 34-73 48-80 (211)
363 3icl_A EAL/ggdef domain protei 23.1 1.1E+02 0.0037 17.1 3.9 41 37-80 67-107 (171)
364 2w84_A Peroxisomal membrane pr 23.0 56 0.0019 17.1 2.0 14 62-75 46-59 (70)
365 3lb5_A HIT-like protein involv 23.0 68 0.0023 18.9 2.7 21 59-79 141-161 (161)
366 2a1x_A Phytanoyl-COA dioxygena 23.0 1.4E+02 0.0048 19.0 4.4 35 33-80 26-60 (308)
367 2nnu_A Regulatory protein E2; 23.0 53 0.0018 20.8 2.2 33 34-73 46-78 (205)
368 3mm5_B Sulfite reductase, diss 22.7 71 0.0024 21.5 3.0 38 41-78 38-77 (366)
369 3ip4_C Aspartyl/glutamyl-tRNA( 22.4 92 0.0031 17.0 3.0 20 61-80 18-37 (100)
370 3ugs_B Undecaprenyl pyrophosph 22.4 81 0.0028 20.1 3.0 45 29-80 37-83 (225)
371 3h0g_D DNA-directed RNA polyme 22.3 37 0.0013 19.8 1.3 23 56-78 106-130 (135)
372 2l3a_A Uncharacterized protein 22.1 33 0.0011 18.6 0.9 23 57-79 53-75 (82)
373 2dtj_A Aspartokinase; protein- 22.0 1.3E+02 0.0045 17.7 3.9 49 28-80 109-157 (178)
374 3pco_B Phenylalanyl-tRNA synth 21.9 64 0.0022 24.3 2.8 28 55-82 760-788 (795)
375 1tue_B Regulatory protein E2; 21.8 57 0.002 20.8 2.2 33 34-73 49-81 (218)
376 2jex_A Regulatory protein E2; 21.8 48 0.0017 21.0 1.8 33 34-73 42-74 (209)
377 2cz4_A Hypothetical protein TT 21.6 65 0.0022 18.2 2.3 48 30-79 36-97 (119)
378 3hou_D DNA-directed RNA polyme 21.6 61 0.0021 20.7 2.3 24 55-78 192-217 (221)
379 3emr_A ECTD; double stranded b 21.5 1.5E+02 0.0053 19.1 4.4 36 32-80 37-72 (310)
380 1iqt_A AUF1, heterogeneous nuc 21.5 80 0.0027 15.1 2.4 17 60-76 8-24 (75)
381 2f7l_A 455AA long hypothetical 21.4 1.9E+02 0.0065 19.8 5.0 38 43-82 418-455 (455)
382 1ufb_A TT1696 protein; structu 21.3 92 0.0032 17.1 2.9 23 58-80 99-121 (127)
383 2fho_A Spliceosomal protein SF 21.2 19 0.00064 17.5 -0.1 10 63-72 22-31 (47)
384 2cz9_A Probable galactokinase; 21.1 1.7E+02 0.0059 18.7 4.7 44 31-79 283-329 (350)
385 1h6z_A Pyruvate phosphate diki 20.8 96 0.0033 23.9 3.6 26 54-79 725-750 (913)
386 2g9w_A Conserved hypothetical 20.6 88 0.003 17.5 2.7 29 29-59 43-71 (138)
387 1e29_A Cytochrome C549; electr 20.4 82 0.0028 17.7 2.6 20 58-77 101-121 (135)
388 3pyw_A S-layer protein SAP; SL 20.4 1.3E+02 0.0045 18.0 3.7 42 32-79 137-178 (203)
389 3i4s_A Histidine triad protein 20.4 1.1E+02 0.0036 17.9 3.1 21 60-80 119-139 (149)
390 1nz8_A Transcription antitermi 20.2 81 0.0028 17.5 2.5 16 60-75 100-115 (119)
391 1w25_A Stalked-cell differenti 20.1 2E+02 0.0069 19.1 5.1 37 40-80 359-395 (459)
392 2d0w_A Cytochrome CL; electron 20.1 92 0.0032 18.2 2.8 21 57-77 102-124 (170)
393 4g06_A Uncharacterized protein 20.0 77 0.0026 17.0 2.2 21 57-77 58-78 (79)
394 1vd2_A Protein kinase C, IOTA 20.0 71 0.0024 17.3 2.1 58 13-77 15-76 (89)
395 1rxq_A YFIT; nickel-binding, h 20.0 83 0.0029 17.9 2.6 22 57-78 13-34 (178)
No 1
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.85 E-value=4e-21 Score=134.82 Aligned_cols=79 Identities=32% Similarity=0.453 Sum_probs=69.7
Q ss_pred CCceeeecccceEEEEEeeeCCCCc--hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLR--KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~--~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
||.|++|||+|||+||||+++.... .+.+.++.+.|+++|+++.++|..+|+|||+|||+||++|+|+++++|+++|+
T Consensus 374 ~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~ 453 (456)
T 4atq_A 374 GSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIK 453 (456)
T ss_dssp --CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 5789999999999999998754322 56788899999999999999988899999999999999999999999999997
Q ss_pred c
Q 042283 81 K 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 454 a 454 (456)
T 4atq_A 454 A 454 (456)
T ss_dssp H
T ss_pred h
Confidence 4
No 2
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.79 E-value=2.7e-19 Score=126.07 Aligned_cols=77 Identities=22% Similarity=0.436 Sum_probs=67.7
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc------hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR------KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~------~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l 75 (82)
++|.|++|||+|||+|||++.+..+. ...+.++.+.|+++||++++. +|+|+|+|||+||++|+|++++++
T Consensus 385 ~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---g~~i~l~PPL~it~~eid~~~~~l 461 (473)
T 4e3q_A 385 ERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL---GQSVVLCPPFILTEAQMDEMFDKL 461 (473)
T ss_dssp TSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE---TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred cCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec---CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 56889999999999999998765543 245778999999999999986 589999999999999999999999
Q ss_pred HHhHhc
Q 042283 76 DCSMTK 81 (82)
Q Consensus 76 ~~~l~~ 81 (82)
+++|++
T Consensus 462 ~~al~~ 467 (473)
T 4e3q_A 462 EKALDK 467 (473)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 3
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.52 E-value=3.2e-14 Score=105.64 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=63.9
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc---hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR---KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~---~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
++|.|.+|||.|+|+++|++.+.... ...+..+.+.|+++||++++. +++|||+||+++|++|||+++++|+++
T Consensus 748 ~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~---g~~lrl~pp~~~t~e~id~~~~~l~~~ 824 (831)
T 4a0g_A 748 SHSAVQRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL---GNVIYLMCGPCTSPEICRRLLTKLYKR 824 (831)
T ss_dssp HSTTEEEEEEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCB---TTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred hCCCceeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 46889999999999999998653211 235678899999999999986 599999999999999999999999999
Q ss_pred Hhc
Q 042283 79 MTK 81 (82)
Q Consensus 79 l~~ 81 (82)
+++
T Consensus 825 l~~ 827 (831)
T 4a0g_A 825 LGE 827 (831)
T ss_dssp HTT
T ss_pred HHH
Confidence 864
No 4
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.45 E-value=2.9e-13 Score=94.56 Aligned_cols=76 Identities=22% Similarity=0.411 Sum_probs=63.5
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc------hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR------KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~------~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l 75 (82)
++|.++++||.|+|+++++.++..+. ...+..+.+.|+++|++++++ ++++||+|||++|++|+++++++|
T Consensus 371 ~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---g~~iRi~p~l~~t~e~i~~~l~~l 447 (476)
T 3i5t_A 371 DLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL---GDLCVISPPLIISRAQIDEMVAIM 447 (476)
T ss_dssp TSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE---TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred cCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec---CCEEEEECCCCCCHHHHHHHHHHH
Confidence 46889999999999999997653221 114667889999999999986 389999999999999999999999
Q ss_pred HHhHh
Q 042283 76 DCSMT 80 (82)
Q Consensus 76 ~~~l~ 80 (82)
+++++
T Consensus 448 ~~~l~ 452 (476)
T 3i5t_A 448 RQAIT 452 (476)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99885
No 5
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.44 E-value=2.9e-13 Score=94.54 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=64.3
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc-------hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR-------KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDV 74 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~-------~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~ 74 (82)
++|.+.++||.|+|+++++..+..+. ...+..+.+.|+++|+++++++ ++|||+|||++|++|+++++++
T Consensus 368 ~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---~~iRi~p~~~~t~e~i~~~l~~ 444 (472)
T 3hmu_A 368 DHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG---DRMIISPPLVITPAEIDEMFVR 444 (472)
T ss_dssp GSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET---TEEEECCCTTCCHHHHHHHHHH
T ss_pred cCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC---CEEEEECCCCCCHHHHHHHHHH
Confidence 36789999999999999997542211 1346778899999999999874 9999999999999999999999
Q ss_pred HHHhHh
Q 042283 75 MDCSMT 80 (82)
Q Consensus 75 l~~~l~ 80 (82)
|+++++
T Consensus 445 l~~~l~ 450 (472)
T 3hmu_A 445 IRKSLD 450 (472)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 6
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.38 E-value=2.1e-12 Score=89.35 Aligned_cols=76 Identities=18% Similarity=0.351 Sum_probs=64.9
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc------hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR------KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~------~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l 75 (82)
++|.+.++|+.|+|+++++..+..+. ...+..+.+.|+++|+++++++ +++||+||+++|++|+++++++|
T Consensus 366 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---~~iRi~~~~~~t~e~i~~~l~~l 442 (459)
T 4a6r_A 366 RFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG---DHIVSAPPLVMTRAEVDEMLAVA 442 (459)
T ss_dssp TCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET---TEEEECCCTTCCHHHHHHHHHHH
T ss_pred cCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC---CEEEEECCCCCCHHHHHHHHHHH
Confidence 46789999999999999997543221 2346778899999999999874 89999999999999999999999
Q ss_pred HHhHh
Q 042283 76 DCSMT 80 (82)
Q Consensus 76 ~~~l~ 80 (82)
+++++
T Consensus 443 ~~~l~ 447 (459)
T 4a6r_A 443 ERCLE 447 (459)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99885
No 7
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.38 E-value=2.4e-12 Score=89.09 Aligned_cols=79 Identities=29% Similarity=0.482 Sum_probs=66.3
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc------hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR------KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~------~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l 75 (82)
++|.+.++|+.|+|+++++..+..+. ...+..+.+.|+++|+++++++ .++++||+||+++|++|+++++++|
T Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~iRi~~~~~~t~e~i~~~l~~l 449 (460)
T 3gju_A 371 GHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP-QGDILGFAPPLCLTREQADIVVSKT 449 (460)
T ss_dssp TSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS-SSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred cCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC-CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 56789999999999999997543221 1246678999999999999875 4599999999999999999999999
Q ss_pred HHhHhc
Q 042283 76 DCSMTK 81 (82)
Q Consensus 76 ~~~l~~ 81 (82)
++++++
T Consensus 450 ~~~l~~ 455 (460)
T 3gju_A 450 ADAVKS 455 (460)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998863
No 8
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.37 E-value=3.7e-12 Score=88.15 Aligned_cols=80 Identities=30% Similarity=0.441 Sum_probs=67.4
Q ss_pred CCCceeeecccceEEEEEeeeCCC--CchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQ--LRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~--~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
++|.+.++||.|+|+++++.+... .....+..+.+.|+++|+++.+++..++.+||+||+++|++|+++++++|++++
T Consensus 369 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 369 EDDRIGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp HCTTEEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hCCCeEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 367789999999999999975211 113456788999999999999987667999999999999999999999999998
Q ss_pred hc
Q 042283 80 TK 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 449 ~~ 450 (451)
T 3oks_A 449 RG 450 (451)
T ss_dssp HC
T ss_pred hh
Confidence 64
No 9
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.36 E-value=3.8e-12 Score=88.19 Aligned_cols=80 Identities=29% Similarity=0.425 Sum_probs=67.2
Q ss_pred CCCceeeecccceEEEEEeeeCCC--CchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQ--LRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~--~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
++|.+.++||.|+|+++++.+... .....+..+.+.|+++|+++.+++..++.+||+||+++|++|+++++++|++++
T Consensus 367 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 446 (453)
T 4ffc_A 367 EVDIIGEVRGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDII 446 (453)
T ss_dssp HCSSEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hCCCeEEEEeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 367789999999999999975211 113456788999999999999987667999999999999999999999999998
Q ss_pred hc
Q 042283 80 TK 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 447 ~~ 448 (453)
T 4ffc_A 447 RA 448 (453)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 10
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.33 E-value=3.2e-12 Score=88.90 Aligned_cols=72 Identities=15% Similarity=0.088 Sum_probs=62.7
Q ss_pred CCCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++|.+.++|+.|+|+++++..+. .+..+.+.|+++|+++++. ++.+||+||+++|++|+++++++|++++++
T Consensus 381 ~~~~v~~vr~~G~~~~i~l~~~~-----~~~~~~~~l~~~Gv~v~~~---~~~lRi~p~~~~t~eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 381 ALPAVTDVRVCGAIGVIECDRPV-----DLAVATPAALDRGVWLRPF---RNLVYAMPPYICTPAEITQITSAMVEVARL 452 (457)
T ss_dssp GSTTEEEEEECSSCEEEEESSCC-----CHHHHHHHHHHTTEECCCB---TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeeeecCCeEEEEEECCcc-----cHHHHHHHHHHCCeEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 36778999999999999996532 2567889999999999986 589999999999999999999999999864
No 11
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.33 E-value=1.2e-11 Score=85.17 Aligned_cols=80 Identities=29% Similarity=0.711 Sum_probs=66.6
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc----hHHHHHHHHHHHHcCceeeecCC----CCCEEEEecCcccCHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR----KAETLDVMDKMKQMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~----~~~~~~v~~~~~~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
++|.+.++|+.|+|+++++..+..+. ...+..+.+.++++|+++.+++. .++.|||.||+++|++|++++++
T Consensus 364 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~ 443 (452)
T 3n5m_A 364 EHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIG 443 (452)
T ss_dssp TCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHH
T ss_pred cCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHH
Confidence 56788999999999999997543322 23456788999999999998752 26899999999999999999999
Q ss_pred HHHHhHhc
Q 042283 74 VMDCSMTK 81 (82)
Q Consensus 74 ~l~~~l~~ 81 (82)
+|++++++
T Consensus 444 ~l~~~l~~ 451 (452)
T 3n5m_A 444 TLKTAMER 451 (452)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99999875
No 12
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.22 E-value=3.4e-11 Score=82.97 Aligned_cols=76 Identities=30% Similarity=0.498 Sum_probs=63.7
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc----h--HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR----K--AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~----~--~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l 75 (82)
++|.+.++|+.|+|+++++.++..+. . ..+..+.+.|+++|+++.+. ++.+||+||+++|++|+++++++|
T Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~~~iRi~~~~~~t~e~i~~~l~~l 436 (448)
T 3dod_A 360 ALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPL---GDVIAFLPPLASTAEELSEMVAIM 436 (448)
T ss_dssp TSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE---TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred cCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEecc---CCEEEEECCCCCCHHHHHHHHHHH
Confidence 56788999999999999997543221 1 12567889999999999886 489999999999999999999999
Q ss_pred HHhHh
Q 042283 76 DCSMT 80 (82)
Q Consensus 76 ~~~l~ 80 (82)
+++++
T Consensus 437 ~~~l~ 441 (448)
T 3dod_A 437 KQAIH 441 (448)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99885
No 13
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.22 E-value=2.3e-11 Score=85.47 Aligned_cols=74 Identities=14% Similarity=0.129 Sum_probs=58.9
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc--------hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR--------KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~--------~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
+|+.+.+|||.|+|++++|++++... ......+...|+++||++.+.+ ++.|++.+|++|||++++
T Consensus 364 ~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~------~~~~s~~~T~~dId~~l~ 437 (454)
T 4ao9_A 364 NEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG------FVVLSLPLTDADIDRYVA 437 (454)
T ss_dssp HHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC------EEECCTTCCHHHHHHHHH
T ss_pred hCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC------CEEEeCCCCHHHHHHHHH
Confidence 46788999999999999997643221 2345678888999999998752 245777899999999999
Q ss_pred HHHHhHhc
Q 042283 74 VMDCSMTK 81 (82)
Q Consensus 74 ~l~~~l~~ 81 (82)
+++++|.+
T Consensus 438 al~~~l~~ 445 (454)
T 4ao9_A 438 AIGSFIGG 445 (454)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999864
No 14
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.17 E-value=2.2e-10 Score=78.33 Aligned_cols=79 Identities=35% Similarity=0.600 Sum_probs=66.4
Q ss_pred CCceeeecccceEEEEEeeeCCCCc---hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLR---KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~---~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
+|.+..+++.|+|+++++.++.... ...+..+.+.++++|+++.+++..++.+||+||++.|++|+++++++|++++
T Consensus 343 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 422 (439)
T 3dxv_A 343 HPLIGDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAF 422 (439)
T ss_dssp CTTEEEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 5678899999999999997543221 3356778899999999999987666999999999999999999999999998
Q ss_pred hc
Q 042283 80 TK 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 423 ~~ 424 (439)
T 3dxv_A 423 SE 424 (439)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 15
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.15 E-value=1.3e-10 Score=79.97 Aligned_cols=73 Identities=26% Similarity=0.510 Sum_probs=61.8
Q ss_pred CCCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
++|.+.++|+.|+|+++++..+. ..+..+.+.|+++|+++.+++ .+.+|++||+++|++|+++++++|+++++
T Consensus 355 ~~~~~~~~~~~g~~~~i~~~~~~----~~~~~~~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 355 DSKIVRDVRGKGLLCAIEFKNEL----VNVLDICLKLKENGLITRDVH--DKTIRLTPPLCITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp TCTTEEEEEEETTEEEEEECTTT----CCHHHHHHHHHHTTEECCEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred hCCCeEEEEeeeeEEEEEEccCh----hHHHHHHHHHHHCCeEEecCC--CCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 46777889999999999996431 125578889999999999863 68999999999999999999999999875
No 16
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.14 E-value=2.2e-10 Score=79.08 Aligned_cols=74 Identities=16% Similarity=0.390 Sum_probs=61.9
Q ss_pred CCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++.+.++|+.|+|+++++..+.. ..+..+.+.++++|+++.+.+ ++++||+||+++|++|+++++++|++++++
T Consensus 365 ~~~~~~~~~~g~~~~v~l~~~~~---~~~~~l~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 365 SDVVTAVRGKGLLNAIVIKETKD---WDAWKVCLRLRDNGLLAKPTH--GDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp TTTEEEEEEETTEEEEEECCCSS---CCHHHHHHHHHHTTEECCBSS--SSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEeeeeEEEEEEecCcc---HHHHHHHHHHHHCCeEEecCC--CCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 46677899999999999964310 124578889999999998863 689999999999999999999999999864
No 17
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.12 E-value=3.1e-10 Score=76.49 Aligned_cols=72 Identities=22% Similarity=0.427 Sum_probs=62.7
Q ss_pred CCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+|.+.++++.|+|+++++.... .+..+.+.+.++|+++++++ .+.+||+||++.|++|+++++++|++++++
T Consensus 323 ~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~l~~~Gi~v~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 323 FDFCKKRKGLGFMQGLSLDKSV-----KVAKVIQKCQENALLLISCG--ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp CTTEEEEEEETTEEEEEECTTS-----CHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEeEEEEEEEEeCCcc-----hHHHHHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 5678899999999999996532 35678888999999999875 789999999999999999999999999864
No 18
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.11 E-value=1.8e-10 Score=78.62 Aligned_cols=79 Identities=18% Similarity=0.307 Sum_probs=59.2
Q ss_pred CCCceeeecccceEEEEEeeeCCCCc-----hHHHHHHHHHHHHcCceeeec-----CCCCCEEEEecCcccCHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQLR-----KAETLDVMDKMKQMGVLIGKG-----GFYGNVFRIAPPLCFTKEDANYL 71 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~~~-----~~~~~~v~~~~~~~Gll~~~~-----g~~~~~i~~~PPL~i~~~eid~~ 71 (82)
++|.+..+++.|+|+++++.+. .+. ...+..+.+.|+++|++++++ +..++.+||+||++.|++|++++
T Consensus 339 ~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~ 417 (430)
T 3i4j_A 339 RFPQMMQVRGTGLLLGVVLGDL-ATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGL 417 (430)
T ss_dssp HCTTEEEEEEETTEEEEEEC-------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHH
T ss_pred hCCCeEEEEEEEEEEEEEeccc-cccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHH
Confidence 3577889999999999999632 111 112467889999999999986 22478999999999999999999
Q ss_pred HHHHHHhHhc
Q 042283 72 VDVMDCSMTK 81 (82)
Q Consensus 72 ~~~l~~~l~~ 81 (82)
+++|++++++
T Consensus 418 l~~l~~~l~~ 427 (430)
T 3i4j_A 418 LALLAGALED 427 (430)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999863
No 19
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.11 E-value=1.4e-10 Score=80.95 Aligned_cols=72 Identities=19% Similarity=0.414 Sum_probs=61.4
Q ss_pred CC-ceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 3 YG-TIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 3 ~~-~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+| .+.++|+.|+|+++++... .....+.+.|+++|+++.+++ .++|||+||+++|++||++++++|++++++
T Consensus 398 ~~~~v~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~~~Gv~~~~~g--~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 398 YPQFISRVRGRGTFCSFDTPDE-----SIRNKLISIARNKGVMLGGCG--DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp CTTTCEEEEEETTEEEEECSSH-----HHHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEeecCCceEEEEEeCCh-----hHHHHHHHHHHHCCeEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 56 4788999999999988531 245678899999999999864 589999999999999999999999999864
No 20
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.10 E-value=2e-10 Score=79.44 Aligned_cols=72 Identities=19% Similarity=0.415 Sum_probs=61.3
Q ss_pred CCc-eeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 3 YGT-IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 3 ~~~-v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+|. +..+|+.|+|+++++... .....+.+.|+++|+++.+++ .+++||+||+++|++|+++++++|++++++
T Consensus 375 ~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~~~Gv~v~~~g--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 375 FPAVVLDPRGRGLMCAFSLPTT-----ADRDELIRQLWQRAVIVLPAG--ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp STTTSEEEEEETTEEEEECSSH-----HHHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeEeeccEEEEEEECCh-----HHHHHHHHHHHHCCeEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 565 788999999999988531 235678889999999999875 689999999999999999999999998863
No 21
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.08 E-value=3.8e-10 Score=77.28 Aligned_cols=74 Identities=23% Similarity=0.436 Sum_probs=61.4
Q ss_pred CCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+|.+.++|+.|+|+++++..+.. .....+.+.++++|+++.+++ .+.+||+||+++|++|+++++++|++++++
T Consensus 344 ~~~~~~~~~~g~~~~v~~~~~~~---~~~~~l~~~l~~~Gi~v~~~~--~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 344 FDIFSDIRGMGLLIGAELKPKYK---GRARDFLYAGAEAGVMVLNAG--ADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp HCCEEEEEEETTEEEEEECGGGT---TCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecceEEEEEECCCch---HHHHHHHHHHHHCCCEEEeCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 46677899999999999964210 125578889999999999874 689999999999999999999999998753
No 22
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.03 E-value=1.3e-09 Score=74.25 Aligned_cols=79 Identities=28% Similarity=0.577 Sum_probs=63.6
Q ss_pred CCceeeecccceEEEEEeeeCCCCc---hHHHHHHHHHHHHcCceeeecCCCC--CEEEEecCcccCHHHHHHHHHHHHH
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLR---KAETLDVMDKMKQMGVLIGKGGFYG--NVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~---~~~~~~v~~~~~~~Gll~~~~g~~~--~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
+|.+..+++.|+|+++++..+..+. ......+.+.++++|+++.+++..+ +.+||+||++.|++|+++++++|++
T Consensus 348 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~ 427 (433)
T 1zod_A 348 FDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ 427 (433)
T ss_dssp CTTEEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 5667889999999999997532110 1235678888999999998875444 8999999999999999999999999
Q ss_pred hHhc
Q 042283 78 SMTK 81 (82)
Q Consensus 78 ~l~~ 81 (82)
++++
T Consensus 428 ~l~~ 431 (433)
T 1zod_A 428 AIER 431 (433)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8853
No 23
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=98.98 E-value=2.6e-09 Score=73.28 Aligned_cols=76 Identities=14% Similarity=0.259 Sum_probs=60.8
Q ss_pred CCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+|.+.++|+.|+|+.+++..+..........+.+.++++||+++++ ++.+||+||+++|++|+++++++|++++++
T Consensus 371 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---g~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 371 AKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG---GDTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp STTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEE---TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecC---CCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 5667788999999999996532111001235888889999999986 389999999999999999999999998863
No 24
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=98.83 E-value=1.2e-08 Score=69.49 Aligned_cols=71 Identities=17% Similarity=0.208 Sum_probs=59.0
Q ss_pred CCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+|.+..+++.|+|+.+++.... ....+.+.+.++|++++++ ++.+||+||++.|++|+++++++|++++++
T Consensus 353 ~~~~~~~~~~g~~~~~~~~~~~-----~~~~l~~~l~~~Gi~v~~~---~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 353 AEMVADVRVLGAIGVVETTHPV-----NMAALQKFFVEQGVWIRPF---GKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp CTTEEEEEEETTEEEEEESSCB-----CHHHHHHHHHHTTEECCCB---TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred CCCEEEEEEeeEEEEEEECCcc-----cHHHHHHHHHHCCCEEecc---CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 4667778999999999985321 2456788888999999875 489999999999999999999999998753
No 25
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=98.81 E-value=7.3e-09 Score=70.68 Aligned_cols=69 Identities=25% Similarity=0.490 Sum_probs=57.5
Q ss_pred eeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 6 IGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 6 v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+..+++.|+|+.+++..+ ...+. +.+.++++|+++++++ .+.+||+||++.|++|+++++++|++++++
T Consensus 349 ~~~~~~~g~~~~i~~~~~----~~~~~-~~~~l~~~Gv~v~~~~--~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 349 ADDVRGIGLAWGLEYNEK----KVRDR-IIGESFKRGLLLLPAG--RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp SSEEEEETTEEEEECSCH----HHHHH-HHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hhheEeeeEEEEEEEecC----ccHHH-HHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 457899999999998421 11345 8888999999999875 689999999999999999999999998853
No 26
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=98.79 E-value=4.2e-08 Score=66.40 Aligned_cols=78 Identities=24% Similarity=0.434 Sum_probs=62.3
Q ss_pred CCceeeecccceEEEEEeeeCCCC---chHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQL---RKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~---~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
+|.+..+++.|+|+.+++...... .......+.+.+.++|+++.+++...+.+||+|++..+++|+++++++|++++
T Consensus 342 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 421 (426)
T 1sff_A 342 HPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCF 421 (426)
T ss_dssp CTTEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 556677889999999999632110 12345678888999999999875446899999999999999999999999987
Q ss_pred h
Q 042283 80 T 80 (82)
Q Consensus 80 ~ 80 (82)
+
T Consensus 422 ~ 422 (426)
T 1sff_A 422 D 422 (426)
T ss_dssp H
T ss_pred H
Confidence 5
No 27
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=98.77 E-value=2.6e-08 Score=66.98 Aligned_cols=72 Identities=25% Similarity=0.489 Sum_probs=60.7
Q ss_pred CceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 4 GTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 4 ~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+.+.++++.|+++++++..+.. .....+.+.+.++|+++.+++ .+.+|+.|++..|++|+++++++|+++++
T Consensus 327 ~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 327 GLFSEVRGLGLLIGCVLNADYA---GQAKQISQEAAKAGVMVLIAG--GNVVRFAPALNVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp CCEEEEEEETTEEEEEECTTTT---TCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEEEEEEEEeCCcH---HHHHHHHHHHHHCCcEEeecC--CCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4567889999999999965321 135678899999999999874 78999999999999999999999999885
No 28
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=98.73 E-value=5.9e-08 Score=65.33 Aligned_cols=72 Identities=25% Similarity=0.507 Sum_probs=59.6
Q ss_pred CCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++.+..+++.|.++.+++..+. ....+.+.+.++|+++.+++ .+.+||+||+..+++|+++++++|++++++
T Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~-----~~~~l~~~l~~~gi~v~~~~--~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 325 YDVVADVRGMGLMIGIQFREEV-----SNREVATKCFENKLLVVPAG--NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp CTTEEEEEEETTEEEEEECTTS-----CHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEEEeEEEEEEECChH-----HHHHHHHHHHHCCCEEccCC--CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 4555667889999999885321 25578888999999999864 689999999999999999999999998864
No 29
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.12 E-value=2.3e-09 Score=75.41 Aligned_cols=74 Identities=9% Similarity=0.088 Sum_probs=57.3
Q ss_pred CCCceeeecccceEEEEEeeeCCC-----C---chHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 2 KYGTIGDARGWGFMLGVEFVTDSQ-----L---RKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 2 ~~~~v~~vRg~Glm~gie~~~~~~-----~---~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
+++.+.++||.|+|++++|.++.. . ..+....+.+.|+++||++.+++. . . ||+++|++|+|++++
T Consensus 378 ~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~-~-~----~s~~~t~edid~~l~ 451 (465)
T 2yky_A 378 ENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGM-Y-A----LSLEIADAGRDAFAE 451 (465)
Confidence 356678899999999999975110 0 012356788999999999998752 2 2 999999999999999
Q ss_pred HHHHhHhc
Q 042283 74 VMDCSMTK 81 (82)
Q Consensus 74 ~l~~~l~~ 81 (82)
++++++++
T Consensus 452 ~l~~~l~~ 459 (465)
T 2yky_A 452 ALADFIGE 459 (465)
Confidence 99998864
No 30
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.66 E-value=6.2e-08 Score=66.17 Aligned_cols=75 Identities=15% Similarity=0.174 Sum_probs=59.7
Q ss_pred CCceeeecccceEEEEEeeeCCCC--------chHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHH
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQL--------RKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDV 74 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~--------~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~ 74 (82)
++.+.++|+.|+|+++++..+..+ ....+..+.+.++++|+++++++ .+.+|+ ++++|++|+++++++
T Consensus 344 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~r~--~~~~t~e~i~~~l~~ 419 (429)
T 3k28_A 344 HGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ--FEGLFL--STVHSDADIEATIAA 419 (429)
T ss_dssp TTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST--TSCBCC--CTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeeccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCC--CCCEEE--ECCCCHHHHHHHHHH
Confidence 567789999999999999754321 12345678899999999999864 455665 789999999999999
Q ss_pred HHHhHhc
Q 042283 75 MDCSMTK 81 (82)
Q Consensus 75 l~~~l~~ 81 (82)
|++++++
T Consensus 420 l~~~l~~ 426 (429)
T 3k28_A 420 AEIAMSK 426 (429)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999864
No 31
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.63 E-value=1.4e-07 Score=64.32 Aligned_cols=74 Identities=18% Similarity=0.090 Sum_probs=58.2
Q ss_pred CCceeeecccceEEEEEeeeCCCC--------chHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHH
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQL--------RKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDV 74 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~--------~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~ 74 (82)
++.+.++|+.|+|+++++.+.... ....+..+.+.|+++|+++++++ .+.+|+ ++++|++|+++++++
T Consensus 347 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~rl--~~~~t~e~i~~~l~~ 422 (434)
T 3l44_A 347 HNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK--YEAWFL--TTEHTKEDIEYTIEA 422 (434)
T ss_dssp TTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST--TCCEEC--CTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC--CCcEEE--ecccCHHHHHHHHHH
Confidence 456778999999999999643211 12345678889999999999874 456776 689999999999999
Q ss_pred HHHhHh
Q 042283 75 MDCSMT 80 (82)
Q Consensus 75 l~~~l~ 80 (82)
|+++++
T Consensus 423 l~~~l~ 428 (434)
T 3l44_A 423 VGRAFA 428 (434)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999885
No 32
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.62 E-value=1.3e-07 Score=63.52 Aligned_cols=68 Identities=28% Similarity=0.536 Sum_probs=58.2
Q ss_pred CceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 4 GTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 4 ~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+.+..+++.|.|+.+++.. .+..+.+.+.++|+++.+++ .+.+|++||+..|++|+++++++|+++++
T Consensus 325 ~~~~~~~~~g~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 392 (392)
T 3ruy_A 325 PMITEVRGKGLFIGIELNE-------PARPYCEQLKAAGLLCKETH--ENVIRIAPPLVISEEDLEWAFQKIKAVLS 392 (392)
T ss_dssp TTEEEEEEETTEEEEEESS-------CSHHHHHHHHTTTEECCCBT--TTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CCceEEEeeeeEEEEEEcc-------hHHHHHHHHHHCCcEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHhC
Confidence 5577889999999999743 13467888999999999864 68999999999999999999999999874
No 33
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.58 E-value=2e-07 Score=63.42 Aligned_cols=75 Identities=16% Similarity=0.119 Sum_probs=58.7
Q ss_pred CCceeeecccceEEEEEeeeCCCC--------chHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHH
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQL--------RKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDV 74 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~--------~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~ 74 (82)
++.+..+++.|+|+++++..+... ....+..+.+.++++|+++++++. -++.++++.|++|+++++++
T Consensus 344 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~ 419 (427)
T 3fq8_A 344 TGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAA 419 (427)
T ss_dssp TTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHH
T ss_pred CCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHH
Confidence 345567899999999999653221 123456788999999999998642 26788999999999999999
Q ss_pred HHHhHhc
Q 042283 75 MDCSMTK 81 (82)
Q Consensus 75 l~~~l~~ 81 (82)
|++++++
T Consensus 420 l~~~l~~ 426 (427)
T 3fq8_A 420 ARTVMSA 426 (427)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999864
No 34
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.56 E-value=2.3e-07 Score=63.28 Aligned_cols=75 Identities=16% Similarity=0.074 Sum_probs=58.6
Q ss_pred CCceeeecccceEEEEEeeeCCC-Cc--------hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQ-LR--------KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~-~~--------~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
++.+.++||.|+|+++++..+.. .+ ...+..+.+.|+++|+++++++ ... +.+++++|++|++++++
T Consensus 345 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~--~~~~~~~t~e~i~~~l~ 420 (429)
T 4e77_A 345 ENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA--FEA--GFMSLAHSNEDIQKTVN 420 (429)
T ss_dssp TTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST--TSC--EECCTTCCHHHHHHHHH
T ss_pred CCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecC--CCC--EEEeccCCHHHHHHHHH
Confidence 46677899999999999975421 11 2345678899999999999874 233 45689999999999999
Q ss_pred HHHHhHhc
Q 042283 74 VMDCSMTK 81 (82)
Q Consensus 74 ~l~~~l~~ 81 (82)
+|++++++
T Consensus 421 ~l~~~l~~ 428 (429)
T 4e77_A 421 AARRCFAK 428 (429)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99999875
No 35
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=98.50 E-value=3.3e-07 Score=62.55 Aligned_cols=73 Identities=15% Similarity=0.096 Sum_probs=56.0
Q ss_pred CceeeecccceEEEEEeeeCCCC--------chHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHH
Q 042283 4 GTIGDARGWGFMLGVEFVTDSQL--------RKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 4 ~~v~~vRg~Glm~gie~~~~~~~--------~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l 75 (82)
+.+.++|+.|+|+++++..+... .......+.+.|+++|+++.+++ .. ++.||+++|++|+++++++|
T Consensus 349 ~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~--~~~~~~~~t~e~i~~~l~~l 424 (434)
T 2epj_A 349 GLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSN--LE--AVFTGLPHQGEALEIAVEGL 424 (434)
T ss_dssp TCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSST--TS--CEECCTTCSHHHHHHHHHHH
T ss_pred CCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccC--CC--cEEEeccCCHHHHHHHHHHH
Confidence 44567899999999999642100 01245678899999999998864 22 35688999999999999999
Q ss_pred HHhHh
Q 042283 76 DCSMT 80 (82)
Q Consensus 76 ~~~l~ 80 (82)
+++++
T Consensus 425 ~~~l~ 429 (434)
T 2epj_A 425 RSSLK 429 (434)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 36
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.43 E-value=5.4e-07 Score=61.34 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=55.3
Q ss_pred CCceeeecccceEEEEEeeeCCCC--------chHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHH
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQL--------RKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDV 74 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~--------~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~ 74 (82)
++.+.++|+.|+|+++++...... ....+..+.+.++++||++.+++. . ++.||+++|++|+++++++
T Consensus 344 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~--~~~~~~~~t~~~i~~~l~~ 419 (424)
T 2e7u_A 344 KGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF--E--AAFLSVAHREEDVEKTLEA 419 (424)
T ss_dssp TTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS--S--CEECCTTCCHHHHHHHHHH
T ss_pred CCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC--C--ceEeeccCCHHHHHHHHHH
Confidence 455567899999999999642100 123456788899999999998642 2 3567899999999999999
Q ss_pred HHHhH
Q 042283 75 MDCSM 79 (82)
Q Consensus 75 l~~~l 79 (82)
|+++|
T Consensus 420 l~~~l 424 (424)
T 2e7u_A 420 LRKAL 424 (424)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99874
No 37
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=98.33 E-value=2.2e-06 Score=57.45 Aligned_cols=67 Identities=28% Similarity=0.547 Sum_probs=55.5
Q ss_pred ceeeecccceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 5 TIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 5 ~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+..+++.|.|+.+++..+ ...+.+.+. ++|+++.+.+ .+.+|++|++..|++|+++++++|+++++
T Consensus 328 ~~~~~~~~g~~~~~~~~~~-------~~~l~~~l~~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 395 (395)
T 1vef_A 328 KIREVRGMGLMVGLELKEK-------AAPYIARLEKEHRVLALQAG--PTVIRFLPPLVIEKEDLERVVEAVRAVLA 395 (395)
T ss_dssp TEEEEEEETTEEEEEESSC-------SHHHHHHHHHHHCEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEEEEEEEEEEcCh-------HHHHHHHHHHHCCeEEecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHhC
Confidence 3456778899999988532 346778888 8999999863 68999999999999999999999998874
No 38
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=98.21 E-value=3.7e-06 Score=55.83 Aligned_cols=63 Identities=32% Similarity=0.540 Sum_probs=52.3
Q ss_pred eecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 8 DARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 8 ~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
.+++.|.+..+++..+ ...+.+.+.++|+++.+++ .+.+|++||+..+++|+++++++|++++
T Consensus 313 ~~~~~g~~~~~~~~~~-------~~~~~~~l~~~gi~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 313 KVKGRGLMLGLELERE-------CKDYVLKALEKGLLINCTA--GKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp EEEEETTEEEEECSSC-------CHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred CceEEEEEEEEEEcCc-------HHHHHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 4567899999988532 3467788889999998863 6899999999999999999999998864
No 39
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=98.18 E-value=7.3e-06 Score=55.32 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=54.4
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC-----CCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG-----FYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g-----~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+.+.|.++.+++... ..+..+.+.+.++|+++.+.. ...+.+||+|++..|++|+++++++|+++++.
T Consensus 331 ~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 331 IRSESQIIGLETGDE-----RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp CCCSSSEEEEEEESH-----HHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEeCCH-----HHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 446788999988532 245678889999999987532 13579999999999999999999999999863
No 40
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=98.17 E-value=6e-06 Score=56.65 Aligned_cols=72 Identities=17% Similarity=-0.002 Sum_probs=53.8
Q ss_pred CCceeeecccceEEEEEeee-----CC------C---CchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHH
Q 042283 3 YGTIGDARGWGFMLGVEFVT-----DS------Q---LRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDA 68 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~-----~~------~---~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~ei 68 (82)
++.+.++++.|+|+.+++.. +. . ........+.+.++++||++.+. +. +.+|++.|++|+
T Consensus 348 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~----~~--~~l~~~~t~~~i 421 (453)
T 2cy8_A 348 KGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR----GS--VFLSAQHEREHV 421 (453)
T ss_dssp TTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT----TE--EECCTTCCHHHH
T ss_pred CCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC----CC--EEeeccCCHHHH
Confidence 45556789999999999964 10 0 01123567888999999999643 23 446799999999
Q ss_pred HHHHHHHHHhHh
Q 042283 69 NYLVDVMDCSMT 80 (82)
Q Consensus 69 d~~~~~l~~~l~ 80 (82)
++++++|+++++
T Consensus 422 ~~~l~~l~~~l~ 433 (453)
T 2cy8_A 422 EHLVTTFDRVLD 433 (453)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 41
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=98.14 E-value=7.2e-06 Score=56.41 Aligned_cols=64 Identities=23% Similarity=0.393 Sum_probs=52.5
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEec-CcccCHHHHHHHHHHHHHhHhc
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAP-PLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~~ 81 (82)
.+++|.++.+++..+ ...+.+.+.++|++++.. .+++|||+| |+..|++|+++++++|++++++
T Consensus 396 ~~~~g~~~~~~~~~~-------~~~l~~~L~~~Gi~v~~~--~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 396 VEERGCQLTITFSVP-------NKDVFQELEKRGVVCDKR--NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp GGGBCSCEEEEECCT-------TCCHHHHHHTTTEECEEE--TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred HhhcccEEEEEecCC-------HHHHHHHHHHCCEEEecC--CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 456788888888521 235778889999998864 368999999 9999999999999999999864
No 42
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=97.98 E-value=2.6e-05 Score=51.94 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=53.7
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+..|.+..+++... .....+.+.+.++|+++.+... ..+.+|+++++..|++|+++++++|++++++
T Consensus 324 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 324 PGNHPIIPVMLGDA-----QLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp CCSSSEEEEEEECH-----HHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCH-----HHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 56788888887532 2466788999999999986421 2368999999999999999999999999864
No 43
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=97.94 E-value=1.9e-05 Score=53.65 Aligned_cols=71 Identities=13% Similarity=0.096 Sum_probs=53.2
Q ss_pred CceeeecccceEEE-EEeeeCCCCchHHHHHHHHHHHH-cCceeeecC----CCCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 4 GTIGDARGWGFMLG-VEFVTDSQLRKAETLDVMDKMKQ-MGVLIGKGG----FYGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 4 ~~v~~vRg~Glm~g-ie~~~~~~~~~~~~~~v~~~~~~-~Gll~~~~g----~~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|.+..+++.|.|.+ +++..... ....+.+.+++ +|+++.++. ...+.+||.|+ .+++++++++++|++
T Consensus 344 ~~i~~~~~~~~~~~~v~~~~~~~----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~ 417 (421)
T 3l8a_A 344 TKIKVMEPEGTYLVWLDFSAYAI----AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIIS 417 (421)
T ss_dssp CSCEEECCSBSSEEEEECGGGTC----CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred CCceEeCCCeeEEEEEeccccCC----CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHH
Confidence 55777888888888 88854211 13467777874 699998743 23589999999 599999999999999
Q ss_pred hHh
Q 042283 78 SMT 80 (82)
Q Consensus 78 ~l~ 80 (82)
+++
T Consensus 418 ~l~ 420 (421)
T 3l8a_A 418 VFG 420 (421)
T ss_dssp HC-
T ss_pred HHh
Confidence 875
No 44
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=97.86 E-value=5e-05 Score=50.31 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=50.8
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecC--CCCCEEEEec-CcccCHHHHHHHHHHHHHhHhc
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGG--FYGNVFRIAP-PLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g--~~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~~ 81 (82)
..+.+..+++.... ...++.+.+.++ |++++++. ..++.+|+.| ++++|++|+++++++|++++++
T Consensus 318 ~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 318 RLPTITTVTVPAGY-----NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp BCSSEEEEECCTTB-----CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCCCC-----CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 34677777774221 355788888887 99998642 2468999999 9999999999999999999853
No 45
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=97.85 E-value=8.7e-05 Score=48.60 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=52.1
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC-CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF-YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~-~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.|++..+++.+..+ .....+.+.+.++|+++.++.. ..+.+|+.++...+++|+++++++|++++++
T Consensus 297 ~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 297 SPIITAFYSPEDPQ---YRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp CSSEEEEECCCCTT---CCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred CceEEEEEcCccCC---CCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 57788888753101 1255788889999999987532 3679999999999999999999999998764
No 46
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=97.84 E-value=4.8e-05 Score=51.85 Aligned_cols=64 Identities=6% Similarity=0.008 Sum_probs=51.5
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.|+.+++.+ ......+.+.+.++|+++.++.. ..+.+|++++...|++|+++++++|+++++
T Consensus 345 ~~~~~~~~~~~-----~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~ 413 (427)
T 2w8t_A 345 DSAIVAVMLED-----QEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGR 413 (427)
T ss_dssp CSSEEEEEESS-----HHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECC-----HHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 67788888742 12466788999999999987532 136899999999999999999999999875
No 47
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.84 E-value=5.6e-05 Score=50.65 Aligned_cols=67 Identities=12% Similarity=0.067 Sum_probs=53.2
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+..|.++.+++.. ......+.+.+.++|+++.++.. ..+.+|+.++..++++|+++++++|++++++
T Consensus 320 ~~~g~~~~~~~~~-----~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 320 ATESPILPIFIRS-----NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp SCCSSEEEEECCC-----HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCC-----HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 4558888888742 12456788899999999988632 2478999999999999999999999998753
No 48
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=97.81 E-value=5.7e-05 Score=50.01 Aligned_cols=51 Identities=25% Similarity=0.409 Sum_probs=43.6
Q ss_pred HHHHHHHHHHc-CceeeecC--CCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQM-GVLIGKGG--FYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~-Gll~~~~g--~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.++ |++++++. ..++.+|+.|++.+|++|+++++++|++++++
T Consensus 320 ~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 320 AYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 56788889888 99998752 24689999999999999999999999999864
No 49
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=97.80 E-value=0.00018 Score=48.88 Aligned_cols=72 Identities=10% Similarity=0.071 Sum_probs=52.7
Q ss_pred ecccc-eEEEEEeeeCCCCc-hHHHHHHHHHHHHc-CceeeecC----CCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 9 ARGWG-FMLGVEFVTDSQLR-KAETLDVMDKMKQM-GVLIGKGG----FYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 9 vRg~G-lm~gie~~~~~~~~-~~~~~~v~~~~~~~-Gll~~~~g----~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+++.| +++.+++....... ......+.+.++++ |+++.++. ...+.+||.++.+ |++++++++++|++++++
T Consensus 353 ~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 353 LNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp CCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHH
Confidence 34444 89888886422111 22355788888876 99998743 2368999999887 999999999999998863
No 50
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=97.77 E-value=8e-05 Score=49.36 Aligned_cols=63 Identities=8% Similarity=0.030 Sum_probs=50.5
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
++.|.|..+++..+. ....+.+.+.++|++++++. ..+.+|+++++..+++|+++++++|+++
T Consensus 326 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~~~-~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 326 APQAGLVSFTVDSPL-----GHRAIVQKLEEQRIYLRTIA-DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp CCSSSEEEEEECSSS-----CHHHHHHHHHHTTEECEEET-TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred cccccEEEEEcCCCC-----CHHHHHHHHHHCCEEEEecC-CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 567888888884221 24568888889999998863 3589999999999999999999998754
No 51
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=97.76 E-value=9e-05 Score=49.58 Aligned_cols=67 Identities=9% Similarity=0.007 Sum_probs=53.2
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.+.|.+..+++... .....+.+.+.++|+++.++.. ..+.+|+.+++..+++|+++++++|++++++
T Consensus 325 ~~~~~~~~~~~~~~-----~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 325 GADHAIIPVMLGDA-----VVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp CSSSSEEEEEEECH-----HHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCh-----HHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 35788888888421 2456788899999999987532 1358999999999999999999999998753
No 52
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=97.75 E-value=8.9e-05 Score=48.97 Aligned_cols=49 Identities=12% Similarity=0.274 Sum_probs=42.8
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.+.++|+++.++. .++.+|+.+++..|++|+++++++|+++++
T Consensus 348 ~~~~~~~l~~~gi~v~~~~-~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 348 YKEVCKKLRDRGIYVSVCN-CVKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHHHHHHHHTTCBCEECS-SSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhCCeEEeccC-CCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 4578889999999998864 468999999999999999999999999875
No 53
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=97.73 E-value=0.00014 Score=48.77 Aligned_cols=64 Identities=14% Similarity=0.127 Sum_probs=50.5
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC------CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF------YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..|+++.+++..+. ....+.+.+.++|+++.++.. ..+.+|+.++.. +++|+++++++|+++++
T Consensus 322 ~~g~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~ 391 (397)
T 2zyj_A 322 KGGMFVWMELPKGL-----SAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRLGRALK 391 (397)
T ss_dssp SBSSEEEEECSTTC-----CHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEEcCCCC-----CHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHH
Confidence 45888888885321 245788889999999987531 357999999985 99999999999999875
No 54
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=97.72 E-value=0.00021 Score=47.11 Aligned_cols=64 Identities=20% Similarity=0.155 Sum_probs=50.3
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC-CCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG-FYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g-~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..|.++.+.+.. . ....+.+.+.++|+.+++.. ...+.+|+.++...|++|+++++++|+++++
T Consensus 297 ~~~~~~~~~~~~-~-----~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 361 (384)
T 3zrp_A 297 YSNTVTGVILKV-A-----DPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLR 361 (384)
T ss_dssp BCSSEEEEECSS-S-----CHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred cCccEEEEECCC-C-----CHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 346777777743 1 35678889999999998753 1128899999999999999999999999885
No 55
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=97.71 E-value=0.00024 Score=48.08 Aligned_cols=69 Identities=6% Similarity=0.041 Sum_probs=51.5
Q ss_pred cceEEEEEeeeCCCCc-hHHHHHHHHHHHHc-CceeeecCCC----CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLR-KAETLDVMDKMKQM-GVLIGKGGFY----GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~-~~~~~~v~~~~~~~-Gll~~~~g~~----~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.|+|..+++....... ......+.+.++++ |++++++... .+.+|+.++ ..+++++++++++|++++++
T Consensus 352 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 352 AGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp SSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred eeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 5888888885321111 12345788888876 9999886422 468999999 68999999999999999864
No 56
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=97.71 E-value=8.8e-05 Score=48.58 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=40.6
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.+.+.+.++|+++.++....+.+|++|++..|++|+++++++|++++++
T Consensus 304 ~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 304 AMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp HHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 6788888999999864322689999999999999999999999998754
No 57
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=97.66 E-value=0.00022 Score=47.29 Aligned_cols=71 Identities=13% Similarity=0.057 Sum_probs=51.1
Q ss_pred CceeeecccceEEE-EEeeeCCCCchHHHHHHHHHHHHc-CceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 4 GTIGDARGWGFMLG-VEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 4 ~~v~~vRg~Glm~g-ie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|.+.-++..|.+.. +++.... .....+.+.+.++ |++++++.. ..+.+|++++ .+++++++++++|++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~ 388 (391)
T 4dq6_A 315 PKLKVRKPEGTYLLWVDFSALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKN 388 (391)
T ss_dssp TTSEECCCSBSSEEEEECGGGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred CCCEecCCCccEEEEEEhhhcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 44455556665555 7775311 1355788889888 999987532 2489999988 699999999999999
Q ss_pred hHh
Q 042283 78 SMT 80 (82)
Q Consensus 78 ~l~ 80 (82)
+++
T Consensus 389 ~l~ 391 (391)
T 4dq6_A 389 AIN 391 (391)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
No 58
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=97.63 E-value=0.00024 Score=47.98 Aligned_cols=63 Identities=16% Similarity=0.242 Sum_probs=50.2
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC--------CCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG--------FYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g--------~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..|+++.+++... ....+.+.+.++|+++.++| ...+.+||+++.. +++++++++++|.++++
T Consensus 343 ~~g~~~~~~~~~~------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~ 413 (423)
T 3ez1_A 343 KGGYFISLDTAEP------VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIR 413 (423)
T ss_dssp SBSSCEEEEESSS------CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEECCCC------cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHH
Confidence 3578888888532 24567788999999998843 1358999999877 99999999999999875
No 59
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=97.61 E-value=0.00071 Score=44.89 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=49.4
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC----------CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF----------YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~----------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.|..+.+. +. ....+.+.+.++|+++.++.. ..+.+|+.++...|++|+++++++|+++++
T Consensus 331 ~~~~~~~~~~-~~-----~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~ 403 (406)
T 1kmj_A 331 RLGVIAFNLG-KH-----HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR 403 (406)
T ss_dssp CCSEEEEEET-TC-----CHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEC-CC-----CHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 6778888763 11 244677888999999886421 148999999999999999999999999875
No 60
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=97.61 E-value=0.00027 Score=47.16 Aligned_cols=66 Identities=18% Similarity=0.190 Sum_probs=50.2
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecC--CCCCEEEEec-CcccCHHHHHHHHHHHHHhHhc
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGG--FYGNVFRIAP-PLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g--~~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~~ 81 (82)
..+.+..+.+.... ....+.+.++++ |+.+++.. ..++.+|+.+ +++.|++|+++++++|++++++
T Consensus 320 ~~~~~~~~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 320 KMNNVLGVVIPQGI-----NGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp BCSSEEEEECCTTC-----CHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ccccEEEEECCCCC-----CHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence 35677777763221 245788888876 99998642 2467999999 9999999999999999998863
No 61
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=97.60 E-value=0.00032 Score=46.38 Aligned_cols=64 Identities=19% Similarity=0.141 Sum_probs=50.9
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.+..+++.... ....+.+.+.++|+.+.++.. ..+.+|+.++...|++|+++++++|+++++
T Consensus 312 ~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 377 (386)
T 2dr1_A 312 SPTITAVLTPPGI-----KGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVIN 377 (386)
T ss_dssp CSSEEEEECCTTC-----CHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCC-----CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 5778888774221 255788889999999987531 357999999999999999999999999875
No 62
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=97.59 E-value=0.00044 Score=45.61 Aligned_cols=66 Identities=12% Similarity=0.216 Sum_probs=50.8
Q ss_pred CceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 4 GTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 4 ~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
+.+.-++..|.++.+++.. ....+.+.+.++|+++.++.. .++.+|++++ +++|+++++++|++++
T Consensus 296 ~g~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 296 EKVKLYPANGNFVLIDLGI-------EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEKLL 363 (363)
T ss_dssp TTCEECCCCSSEEEEECSS-------CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHHHC
T ss_pred CCceECCCCCeEEEEECCC-------CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHHhC
Confidence 3344456778888887743 245688889999999988532 2689999987 9999999999998864
No 63
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=97.55 E-value=0.00033 Score=46.99 Aligned_cols=60 Identities=15% Similarity=0.140 Sum_probs=47.9
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecC-cccCHHHHHHHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPP-LCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PP-L~i~~~eid~~~~~l~~~l~~ 81 (82)
.|.+..+++.+ ...+.+.+.++|+++... ..+.+|+.++ +.+|++|+++++++|++++++
T Consensus 341 ~~~~~~~~~~~--------~~~l~~~l~~~gi~~~~~--~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 341 RGSHVSFEHPE--------GYAVIQALIDRGVIGDYR--EPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp BCSEEEEECTT--------HHHHHHHHHTTTEECEEE--TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEecCC--------HHHHHHHHHhCCcEeccC--CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 45667776631 456888899999988754 3689999998 899999999999999998753
No 64
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=97.53 E-value=0.00021 Score=46.88 Aligned_cols=63 Identities=10% Similarity=0.121 Sum_probs=48.8
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.|+.+++.... .....+.+.+.++|+.+++.+ .+.+|+.+++.++++|+++++++|+++++
T Consensus 282 ~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~~~--~~~iRl~~~~~~~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 282 KTNMVILRTDNLK----VNAHGFIEALRNSGVLANAVS--DTEIRLVTHKDVSRNDIEEALNIFEKLFR 344 (347)
T ss_dssp CSSEEEEECTTSS----SCHHHHHHHHHHHTEECEEEE--TTEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEccccc----CCHHHHHHHHHHCCCEEecCC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 3556667763211 124578888889999998764 57899999999999999999999999875
No 65
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=97.53 E-value=0.00023 Score=47.76 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=49.4
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCC-----------CCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFY-----------GNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~-----------~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
..|++..+++.... .....+.+.+.++|+++.++... .+.+||+++. +++++++++++|.+++
T Consensus 337 ~~g~~~~~~~~~~~----~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l 410 (417)
T 3g7q_A 337 EGAIFLWLWFKDLP----ITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEI 410 (417)
T ss_dssp CBSSEEEEECTTCS----SCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcCCCC----CCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 45888888875311 12456788889999999875321 4689999996 9999999999999988
Q ss_pred hc
Q 042283 80 TK 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 411 ~~ 412 (417)
T 3g7q_A 411 ER 412 (417)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 66
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=97.53 E-value=0.00022 Score=48.69 Aligned_cols=51 Identities=12% Similarity=0.281 Sum_probs=42.4
Q ss_pred HHHHHHHH-HHcCceeeecCC---------------CCCEEEEecCcc-cCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKM-KQMGVLIGKGGF---------------YGNVFRIAPPLC-FTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~-~~~Gll~~~~g~---------------~~~~i~~~PPL~-i~~~eid~~~~~l~~~l~~ 81 (82)
+..+.+.+ .++|+.+.+++. ..+.+||+||+. +|++|+++++++|++++++
T Consensus 374 ~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 374 AQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp HHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 56678888 889999987442 127999999999 9999999999999998853
No 67
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=97.50 E-value=0.00019 Score=48.04 Aligned_cols=64 Identities=13% Similarity=0.113 Sum_probs=49.8
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecCC------CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGGF------YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g~------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..|++..+++..+. ....+.+.+.++ |+++.++.. ..+.+|++++.. |++|+++++++|+++++
T Consensus 332 ~~~~~~~~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~ 402 (407)
T 2zc0_A 332 IAGMFVMFFLPEGA-----DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYK 402 (407)
T ss_dssp SBSSEEEEECSTTC-----CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEcCCCC-----CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHH
Confidence 45788888874321 245688888888 999987531 257999999988 99999999999999875
No 68
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=97.48 E-value=0.00033 Score=48.25 Aligned_cols=63 Identities=11% Similarity=0.161 Sum_probs=49.2
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC------CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF------YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
-|++..+++.... ....+.+.+.++|+++.++.. ..+.+|++++. .+++++++++++|.++++
T Consensus 375 ~g~~~~v~~~~~~-----~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 375 GGMFIWVTLPDGI-----DSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp BSSEEEEECSTTC-----CHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEcCCCC-----CHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 4788888884321 245788889999999987531 35789999987 499999999999999875
No 69
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.47 E-value=0.00035 Score=45.60 Aligned_cols=64 Identities=16% Similarity=0.146 Sum_probs=50.0
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.+..+++.... ....+.+.+.++|+.+.++.. ..+.+|+.++...|++|+++++++|+++++
T Consensus 281 ~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 346 (352)
T 1iug_A 281 SPAVAAFYLPEGV-----PYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLE 346 (352)
T ss_dssp CTTCEEEECCTTC-----CHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCC-----CHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHH
Confidence 4667777764211 245788889999999987531 357999999999999999999999999875
No 70
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=97.45 E-value=0.00054 Score=46.29 Aligned_cols=68 Identities=7% Similarity=0.053 Sum_probs=48.8
Q ss_pred cceEEEEEeeeCCCC------c-hHHHHHHHHHHH-HcCceeeecCCC---------CCEEEEecCcccCHHHHHHHHHH
Q 042283 12 WGFMLGVEFVTDSQL------R-KAETLDVMDKMK-QMGVLIGKGGFY---------GNVFRIAPPLCFTKEDANYLVDV 74 (82)
Q Consensus 12 ~Glm~gie~~~~~~~------~-~~~~~~v~~~~~-~~Gll~~~~g~~---------~~~i~~~PPL~i~~~eid~~~~~ 74 (82)
.|+++.+++...... . ......+.+.+. ++|+++.++... .+.+||+++. +++++++++++
T Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~ 421 (429)
T 1yiz_A 344 GGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK--KDENLQKAAEI 421 (429)
T ss_dssp BSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS--CHHHHHHHHHH
T ss_pred cceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC--CHHHHHHHHHH
Confidence 488888988542100 0 013456777776 799999875311 5799999993 99999999999
Q ss_pred HHHhHhc
Q 042283 75 MDCSMTK 81 (82)
Q Consensus 75 l~~~l~~ 81 (82)
|+++++.
T Consensus 422 l~~~l~~ 428 (429)
T 1yiz_A 422 LRKWKGS 428 (429)
T ss_dssp HHHHSCC
T ss_pred HHHhccC
Confidence 9998764
No 71
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=97.45 E-value=0.00016 Score=49.37 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.8
Q ss_pred HHHHHHHH-HHcCceeeecCC---------------CCCEEEEecC-cccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKM-KQMGVLIGKGGF---------------YGNVFRIAPP-LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~-~~~Gll~~~~g~---------------~~~~i~~~PP-L~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.+ .++|+.+.++|. ..+.+||+|| +++|++|+++++++|+++++
T Consensus 373 ~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 439 (467)
T 1ax4_A 373 AQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE 439 (467)
T ss_dssp HHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 45788888 889999987321 1279999999 77999999999999998875
No 72
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.45 E-value=0.00025 Score=48.13 Aligned_cols=65 Identities=12% Similarity=0.088 Sum_probs=49.5
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC------CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF------YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.|++..+++.... ....+.+.+.++|+++.++.. ..+.+|+.++.. +++++++++++|+++++
T Consensus 346 ~~~g~~~~~~~~~~~-----~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~ 416 (425)
T 1vp4_A 346 SEGGLFIWLTLPEGF-----DTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVL 416 (425)
T ss_dssp CSBSSEEEEECCTTC-----CTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEEcCCCC-----CHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHH
Confidence 345888888885321 123577788888999987532 257899999985 99999999999999875
No 73
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=97.43 E-value=0.00091 Score=44.16 Aligned_cols=68 Identities=16% Similarity=0.203 Sum_probs=51.7
Q ss_pred CCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
+|.+.-....|.+..+++. ....+.+.+.++|++++++.. ..+.+|++.. +++|+++++++|+++
T Consensus 296 ~~g~~~~~~~~~~~~~~~~--------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~ 364 (367)
T 3euc_A 296 HGGVTVFPSAANFLLARVP--------DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAAS 364 (367)
T ss_dssp STTCEECCCSSSEEEEECS--------CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CCCcEECCCCCeEEEEECC--------CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHH
Confidence 3445545667888888774 134677888999999987542 3589999965 999999999999998
Q ss_pred Hhc
Q 042283 79 MTK 81 (82)
Q Consensus 79 l~~ 81 (82)
+++
T Consensus 365 l~~ 367 (367)
T 3euc_A 365 LQD 367 (367)
T ss_dssp TCC
T ss_pred hcC
Confidence 753
No 74
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=97.43 E-value=0.0006 Score=46.27 Aligned_cols=64 Identities=17% Similarity=0.231 Sum_probs=49.1
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCC------------CCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFY------------GNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~------------~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
..|++..+++.... .....+.+.+.++|+++.++... .+.+||+++. +++++++++++|.++
T Consensus 363 ~~g~~~~~~~~~~~----~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~ 436 (444)
T 3if2_A 363 EGAIFLWLWFKDLP----ISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIGEV 436 (444)
T ss_dssp CBSSEEEEEETTCS----SCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHHHH
T ss_pred CccEEEEEEcCCCC----CCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHHHH
Confidence 45888888885311 12456788889999999875321 1689999998 999999999999988
Q ss_pred Hh
Q 042283 79 MT 80 (82)
Q Consensus 79 l~ 80 (82)
+.
T Consensus 437 ~~ 438 (444)
T 3if2_A 437 VR 438 (444)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 75
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=97.42 E-value=0.00047 Score=45.96 Aligned_cols=67 Identities=13% Similarity=0.227 Sum_probs=50.7
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC--------CCCCEEEEecCc----ccCHHHHHHHHHHHHHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG--------FYGNVFRIAPPL----CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g--------~~~~~i~~~PPL----~i~~~eid~~~~~l~~~ 78 (82)
+.|.+..+++.... .....+.+.+.++|++++++. ...+.+|++++. .++++|+++++++|+++
T Consensus 308 ~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 383 (405)
T 2vi8_A 308 TDNHLLLVDLRPQQ----LTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLV 383 (405)
T ss_dssp CSSSEEEEECGGGT----CCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEccCCC----CCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHH
Confidence 45788888885311 024567788889999998742 124689999998 68999999999999999
Q ss_pred Hhc
Q 042283 79 MTK 81 (82)
Q Consensus 79 l~~ 81 (82)
+++
T Consensus 384 ~~~ 386 (405)
T 2vi8_A 384 LKN 386 (405)
T ss_dssp HTC
T ss_pred Hhc
Confidence 864
No 76
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=97.41 E-value=0.0013 Score=43.70 Aligned_cols=62 Identities=13% Similarity=0.089 Sum_probs=49.2
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++..|.+..+++.. ....+.+.+.++|+++.+++ ..+.+|+.++ +++|+++++++|+++++.
T Consensus 306 ~~~~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~-~~~~iRis~~---~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 306 VPSESNFVFFGDFS-------DQHAAWQAFLDRGVLIRDVG-IAGHLRTTIG---VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp ECCSSSEEEEECCS-------SHHHHHHHHHHTTEECBCCS-CTTEEEEECC---CHHHHHHHHHHHHHHHTT
T ss_pred CCCCCeEEEEECCC-------CHHHHHHHHHHCCEEEEECC-CCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 45667888887741 24567788889999998863 3589999998 899999999999998864
No 77
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=97.40 E-value=0.00072 Score=45.13 Aligned_cols=64 Identities=16% Similarity=0.180 Sum_probs=50.0
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC----------CCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG----------FYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g----------~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+.|.|..+.+.. . ....+.+.+.++|+.+.++. ...+.+|+.++...+++|+++++++|+++++
T Consensus 338 ~~~~~~~~~~~~-~-----~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~ 411 (420)
T 1t3i_A 338 DRAALASFNVAG-L-----HASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIR 411 (420)
T ss_dssp CBCSEEEEEETT-B-----CHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEEECC-C-----CHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 358888887631 1 24467788899999998751 0157899999999999999999999998875
No 78
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=97.38 E-value=0.00029 Score=47.03 Aligned_cols=68 Identities=15% Similarity=0.314 Sum_probs=51.6
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--------CCCEEEEecCcc----cCHHHHHHHHHHHHH
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--------YGNVFRIAPPLC----FTKEDANYLVDVMDC 77 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--------~~~~i~~~PPL~----i~~~eid~~~~~l~~ 77 (82)
++.|.+..+++.... .....+.+.+.++|+++.++.. ..+.+|++++.. .|++|+++++++|++
T Consensus 308 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 383 (407)
T 2dkj_A 308 GTDNHLFLVDLRPKG----LTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR 383 (407)
T ss_dssp SCSSSEEEEECGGGT----CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred CCCceEEEEECcccC----CCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence 457888888885311 0245677888899999987521 256899999875 899999999999999
Q ss_pred hHhc
Q 042283 78 SMTK 81 (82)
Q Consensus 78 ~l~~ 81 (82)
++++
T Consensus 384 ~~~~ 387 (407)
T 2dkj_A 384 ALLE 387 (407)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8753
No 79
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=97.38 E-value=0.00042 Score=45.51 Aligned_cols=64 Identities=11% Similarity=-0.040 Sum_probs=49.8
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|.+..+++.. .....++.+.+.++|+.+.++....+.+|+.+....+++++++++++|++++++
T Consensus 296 ~~~~~~~~~~-----~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 296 LMNVTFNLRN-----EELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp SSEEEEECSS-----HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCC-----CccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 5577777632 123556788888999998775334578999999999999999999999998764
No 80
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=97.38 E-value=0.00062 Score=46.12 Aligned_cols=61 Identities=20% Similarity=0.359 Sum_probs=48.7
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC--------CCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG--------FYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g--------~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
|++..+++... ....+.+.+.++||++.+++ ...+.+||+++.. +++++++++++|.++++
T Consensus 350 g~~~~~~~~~~------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 350 GYFISLDVVPG------TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVL 418 (427)
T ss_dssp SSCEEEECSTT------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHH
T ss_pred cEEEEEECCcc------hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHH
Confidence 78888887532 24567788899999998832 1468999999877 99999999999999875
No 81
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=97.37 E-value=0.0022 Score=42.05 Aligned_cols=69 Identities=9% Similarity=0.032 Sum_probs=52.1
Q ss_pred CCcee-eecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 3 YGTIG-DARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 3 ~~~v~-~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
+|.+. ..++.|.++.+++... ....+.+.+.++|+++.++.. ..+.+|++++ ++++++++++++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~ 356 (361)
T 3ftb_A 286 IGFIKRVFSPHANFVLCRLENI------SGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKG 356 (361)
T ss_dssp SSSEEEEECCSSSEEEEEESSS------CHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred CCCCceecCCCCeEEEEEcCCC------CHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHH
Confidence 45555 6677888888888531 245788889999999987532 2589999987 88888888888887
Q ss_pred hHh
Q 042283 78 SMT 80 (82)
Q Consensus 78 ~l~ 80 (82)
..+
T Consensus 357 ~~~ 359 (361)
T 3ftb_A 357 VEN 359 (361)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 82
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=97.37 E-value=0.00023 Score=47.32 Aligned_cols=63 Identities=13% Similarity=0.167 Sum_probs=49.1
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
+.|.|..+++.. ......+.+.+.++|+++.++.. ..+.+|+.++..+|++|+++++++|+++
T Consensus 316 ~~~~~~~~~~~~-----~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 316 SCSAIQPLIVGD-----NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CCSSBCCEEEES-----HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCC-----HHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 557777777742 12456788899999999987532 1378999999999999999999999874
No 83
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=97.35 E-value=0.00066 Score=45.06 Aligned_cols=62 Identities=15% Similarity=0.050 Sum_probs=47.1
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|++..+++.... ....+.+.+.++|+++.++.. ..+.+|+.++. +++++++++++|+++++
T Consensus 311 ~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~i~~~l~~l~~~l~ 376 (376)
T 2dou_A 311 ATMYLWGRLPEGV-----DDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR--PLEELLEAAKRIREALD 376 (376)
T ss_dssp BSSEEEEECCTTC-----CHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHTC-
T ss_pred eeEEEEEECCCCC-----CHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHhC
Confidence 4777888875321 245688889999999987532 25799999985 89999999999998763
No 84
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=97.34 E-value=0.00096 Score=44.07 Aligned_cols=71 Identities=7% Similarity=0.044 Sum_probs=49.7
Q ss_pred CceeeecccceEEE-EEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 4 GTIGDARGWGFMLG-VEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 4 ~~v~~vRg~Glm~g-ie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|.+.-++..|.+.. +++.... .....+.+.++ ++|++++++.. ..+.+|+.+. .+++++++++++|++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~ 380 (383)
T 3kax_A 307 PTLSVMKPEGSFLLWIDCSALN----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRLRH 380 (383)
T ss_dssp TTCEECCCSBSSEEEEECGGGC----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHHHH
T ss_pred CCceEecCCceEEEEEEccccC----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 34444555555554 7775321 12557888887 68999987431 2489999987 499999999999999
Q ss_pred hHh
Q 042283 78 SMT 80 (82)
Q Consensus 78 ~l~ 80 (82)
+++
T Consensus 381 ~l~ 383 (383)
T 3kax_A 381 TFS 383 (383)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
No 85
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=97.32 E-value=0.0012 Score=43.64 Aligned_cols=63 Identities=8% Similarity=0.072 Sum_probs=49.5
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHH-cCceeeecC------CCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQ-MGVLIGKGG------FYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~-~Gll~~~~g------~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
..+.|++..+++. ....+.+.+.+ +|+++.++. ...+.+|+.++. |++++++++++|++++++
T Consensus 305 ~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 305 IYPYSFYVYLPVQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY--DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp CCSBSSEEEEECS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS--CHHHHHHHHHHHHHHHCC
T ss_pred CCCcceEEEEECC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 4566888888774 13467788887 899998742 245899999884 999999999999999864
No 86
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=97.32 E-value=0.0005 Score=46.53 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=48.0
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHH-cCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQ-MGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~-~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++..+++. +. ....+.+.+.+ +|+++.++ ..+.+|++++.+ +++++++++++|++++++
T Consensus 368 g~~~~~~~~-~~-----~~~~~~~~l~~~~gi~v~~g--~~~~iRis~~~~-~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 368 GYFMAIKVH-DV-----DPEALRKHLIDKYSIGVIAL--NATDIRIAFSCV-EKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp SSEEEEEES-SS-----CHHHHHHHHHHHHCEECEEC--SSSEEEEEGGGS-CGGGHHHHHHHHHHHHHH
T ss_pred eEEEEeCCC-CC-----CHHHHHHHHHHhCCEEEecC--CCCeEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 677888885 21 24567888887 99999986 367899999974 999999999999998853
No 87
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=97.31 E-value=0.00081 Score=44.70 Aligned_cols=64 Identities=13% Similarity=0.172 Sum_probs=48.0
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecC--CCCCEEEEec-CcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGG--FYGNVFRIAP-PLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g--~~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.+..+++.... ....+.+.+.++ |++++++. ...+.+|+.+ +++.+++|+++++++|+++++
T Consensus 314 ~~~~~~~~~~~~~-----~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 314 LPTVTGIMIPKGV-----DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp CTTEEEEECCTTC-----CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCC-----CHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHH
Confidence 3456677663211 245688888875 99998642 1368999999 899999999999999999875
No 88
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=97.28 E-value=0.00086 Score=44.52 Aligned_cols=63 Identities=19% Similarity=0.153 Sum_probs=47.4
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecCC--CCCEEEEec-CcccCHHHHHHHHHHHHHhHh
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGGF--YGNVFRIAP-PLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g~--~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~ 80 (82)
+.+..+++.... ....+.+.+.++ |++++++.. ..+.+|+.+ +++.+++++++++++|+++++
T Consensus 315 ~~~~~~~~~~~~-----~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~ 381 (393)
T 2huf_A 315 STVTTIKVPQGV-----DWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVA 381 (393)
T ss_dssp TTEEEEECCTTC-----CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCC-----CHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHH
Confidence 557777763211 245677888764 999986421 358999999 889999999999999999875
No 89
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=97.28 E-value=0.0011 Score=44.95 Aligned_cols=62 Identities=19% Similarity=0.337 Sum_probs=48.7
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--------CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--------YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|+++.+++... ....+.+.+.++||++.+++. ..+.+||+++. .+++++++++++|+++++
T Consensus 347 ~g~~~~~~~~~~------~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 347 GGYFISVDVVPG------TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVL 416 (422)
T ss_dssp BSSCEEEEESTT------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHH
T ss_pred cceEEEEECCCC------CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHH
Confidence 477788887432 134577788899999988432 24789999999 999999999999999875
No 90
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=97.26 E-value=0.00074 Score=45.05 Aligned_cols=72 Identities=11% Similarity=0.051 Sum_probs=50.1
Q ss_pred Cceeeeccc-ceEEEEEeeeCCCCchHHHHHHHHHHHH-cCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 4 GTIGDARGW-GFMLGVEFVTDSQLRKAETLDVMDKMKQ-MGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 4 ~~v~~vRg~-Glm~gie~~~~~~~~~~~~~~v~~~~~~-~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|.+.-++.. |++..+++.... .....+.+.+++ +|+++.++.. ..+.+|++++. +++++++++++|++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~ 400 (407)
T 3nra_A 327 EGVFARTPQAGSYLFPRLPKLA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVT 400 (407)
T ss_dssp TTCBCCCCSBSSEECCBCCCBS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHH
T ss_pred CCceeccCCeeEEEEEeCCCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHH
Confidence 334333444 477777664311 134567777865 6999987532 35899999985 99999999999999
Q ss_pred hHhc
Q 042283 78 SMTK 81 (82)
Q Consensus 78 ~l~~ 81 (82)
++++
T Consensus 401 ~~~~ 404 (407)
T 3nra_A 401 LVER 404 (407)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8863
No 91
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=97.25 E-value=0.0012 Score=44.21 Aligned_cols=64 Identities=16% Similarity=0.199 Sum_probs=48.5
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeec--C--------------------------CCCCEEEEecC
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKG--G--------------------------FYGNVFRIAPP 60 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~--g--------------------------~~~~~i~~~PP 60 (82)
.||.|.|+++++... ...+.+.+.++|++++.. | ...+.+|++|+
T Consensus 293 ~~~~~~~~~~~~~~~-------~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~ 365 (386)
T 1cs1_A 293 QKGFGAMLSFELDGD-------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG 365 (386)
T ss_dssp CSSCCSEEEEEESSC-------HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECC
T ss_pred cCCCceEEEEEECCC-------HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEc
Confidence 478899999998531 335667778899988741 1 12589999999
Q ss_pred cccCHHHHHHHHHHHHHhH
Q 042283 61 LCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 61 L~i~~~eid~~~~~l~~~l 79 (82)
+--++++++.+.++++++.
T Consensus 366 ~~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 366 IEDGEDLIADLENGFRAAN 384 (386)
T ss_dssp SSCHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHhh
Confidence 9888888888888887764
No 92
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=97.25 E-value=0.0011 Score=43.17 Aligned_cols=65 Identities=15% Similarity=0.132 Sum_probs=49.6
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC--CCCCEEEEecCcccCHHHHH-HHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG--FYGNVFRIAPPLCFTKEDAN-YLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g--~~~~~i~~~PPL~i~~~eid-~~~~~l~~~l~~ 81 (82)
.+.+..+++.... ....+.+.+.++|+.+.++. ...+.+|+.++...+++|++ +++++|++++++
T Consensus 285 ~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 285 LPTVLVVRPPEGV-----DADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp CTTEEEEECCTTC-----CHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEECCCCC-----CHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 4666677763211 24578888999999998743 13578999999899999999 999999998864
No 93
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=97.25 E-value=0.0018 Score=42.63 Aligned_cols=63 Identities=17% Similarity=0.224 Sum_probs=48.8
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCC-CCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFY-GNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~-~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
....|.+..+++... ....+.+.+.++|+++.++... .+.+|++.. +++|+++++++|+++++
T Consensus 302 ~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~~~l~ 365 (365)
T 3get_A 302 IDSYTNFITYFFDEK------NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTEFDKILR 365 (365)
T ss_dssp CCCSSSEEEEECSSS------CHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred CCCCCeEEEEECCCC------CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHHHHHHhC
Confidence 456677877777432 2457888899999999886422 589999976 89999999999998873
No 94
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=97.23 E-value=0.0018 Score=43.43 Aligned_cols=64 Identities=17% Similarity=0.208 Sum_probs=49.3
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+.+..+++.... ....+.+.+.++|+.++++.. .++.+|+++....|++|+++++++|++++++
T Consensus 332 ~~~~~~~~~~~~-----~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 332 QVVGTIDFVDDV-----DAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp SSEEEEEECTTS-----CHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCCC-----CHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 557777773211 245788889999999876311 2478999999999999999999999998864
No 95
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=97.20 E-value=0.0011 Score=43.26 Aligned_cols=62 Identities=11% Similarity=0.110 Sum_probs=47.6
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC----------------------------CCCCEEEEecCc
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG----------------------------FYGNVFRIAPPL 61 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g----------------------------~~~~~i~~~PPL 61 (82)
++.|.|.++++. + ...+.+.+.++|++++... ...+.+|+++++
T Consensus 242 ~~~~~~~~~~~~-~-------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~ 313 (331)
T 1pff_A 242 KMFGSMIAFDVD-G-------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGC 313 (331)
T ss_dssp SSCCSEEEEECS-S-------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCS
T ss_pred CCCceEEEEEEC-C-------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEec
Confidence 678899999885 1 2356677888999775431 125899999999
Q ss_pred ccCHHHHHHHHHHHHHhH
Q 042283 62 CFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~l 79 (82)
..++++++.+.+++++++
T Consensus 314 ~~t~~~i~~l~~~l~~~~ 331 (331)
T 1pff_A 314 ENVQDIIDDLKQALDLVL 331 (331)
T ss_dssp SCHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 999999999999998653
No 96
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=97.20 E-value=0.0013 Score=43.56 Aligned_cols=64 Identities=14% Similarity=0.081 Sum_probs=48.3
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecC--CCCCEEEEec-CcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGG--FYGNVFRIAP-PLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g--~~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.+..+++.... ....+.+.+.++ |+.+.++. ...+.+|+.| ++..|++|+++++++|+++++
T Consensus 302 ~~~~~~~~~~~~~-----~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 302 SPTTTAVRTPDGV-----DEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp CTTEEEEECCTTC-----CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCC-----CHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHH
Confidence 4667777763211 245688888887 99998753 2368999997 558999999999999999875
No 97
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=97.18 E-value=0.0005 Score=44.91 Aligned_cols=49 Identities=6% Similarity=0.114 Sum_probs=38.4
Q ss_pred HHHHHHHHc-CceeeecC-CCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 33 DVMDKMKQM-GVLIGKGG-FYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 33 ~v~~~~~~~-Gll~~~~g-~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.+.+.+.++ |+++.... ...+.+|++|++..+++|+++++++|++++++
T Consensus 307 ~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 307 TMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp HHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 677888888 99885421 13568999999999999999999999998753
No 98
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=97.15 E-value=0.0016 Score=43.56 Aligned_cols=66 Identities=14% Similarity=0.223 Sum_probs=47.2
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeec------C--CCCCEEEEecCcc----cCHHHHHHHHHHHHHhH
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKG------G--FYGNVFRIAPPLC----FTKEDANYLVDVMDCSM 79 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~------g--~~~~~i~~~PPL~----i~~~eid~~~~~l~~~l 79 (82)
.+.+..+++.... .....+.+.+.++|+++.+. + ...+.+||.||++ +++++++++++++++++
T Consensus 318 ~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l 393 (420)
T 3gbx_A 318 ENHLFLLDLVDKN----LTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVL 393 (420)
T ss_dssp SSSEEEEECGGGT----CCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCC----CCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHH
Confidence 4556666664321 12456777788899999872 1 1245699999987 56999999999999998
Q ss_pred hc
Q 042283 80 TK 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 394 ~~ 395 (420)
T 3gbx_A 394 DN 395 (420)
T ss_dssp HT
T ss_pred hC
Confidence 64
No 99
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=97.14 E-value=0.0015 Score=44.57 Aligned_cols=69 Identities=12% Similarity=0.097 Sum_probs=47.0
Q ss_pred ceEEEEEeee--CCCCchHH-HHHHHHHH-HHcCceeeecCC---------------CCCEEEEecCcc-cCHHHHHHHH
Q 042283 13 GFMLGVEFVT--DSQLRKAE-TLDVMDKM-KQMGVLIGKGGF---------------YGNVFRIAPPLC-FTKEDANYLV 72 (82)
Q Consensus 13 Glm~gie~~~--~~~~~~~~-~~~v~~~~-~~~Gll~~~~g~---------------~~~~i~~~PPL~-i~~~eid~~~ 72 (82)
|.++.+++.. +.....+. ...+.+.+ .++|+.+.+++. ..+.+||++|+. +|++|+++++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~ 421 (456)
T 2ez2_A 342 GHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVA 421 (456)
T ss_dssp SSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHH
T ss_pred ceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHH
Confidence 5666666532 11111223 45557777 578998655331 137899999998 8999999999
Q ss_pred HHHHHhHhc
Q 042283 73 DVMDCSMTK 81 (82)
Q Consensus 73 ~~l~~~l~~ 81 (82)
++|++++++
T Consensus 422 ~~l~~~l~~ 430 (456)
T 2ez2_A 422 DGIIKLYQH 430 (456)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999998753
No 100
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=97.14 E-value=0.00033 Score=46.99 Aligned_cols=46 Identities=15% Similarity=0.075 Sum_probs=39.0
Q ss_pred HHHHHHcCceeeecCC-------CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 35 MDKMKQMGVLIGKGGF-------YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 35 ~~~~~~~Gll~~~~g~-------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.+.++|+++.+... .++++|++|+...|++||++++++|+++++
T Consensus 322 ~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~ 374 (379)
T 3ke3_A 322 GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALD 374 (379)
T ss_dssp SHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHH
Confidence 5678899999876421 168999999999999999999999999875
No 101
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=97.12 E-value=0.0019 Score=42.73 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=46.0
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++.-+++.... .....+.+.++ ++|+++.++.. ..+.+|+.+. .+++++++++++|.+++++
T Consensus 321 ~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 321 SYLAWVDISALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp SSEEEEECGGGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEehhhcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 444446664321 13557888886 89999987532 2378999988 5999999999999999864
No 102
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=97.11 E-value=0.0013 Score=44.16 Aligned_cols=51 Identities=8% Similarity=0.009 Sum_probs=41.8
Q ss_pred HHHHHHHHHHcCceeeecCCC-------------------------CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQMGVLIGKGGFY-------------------------GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~-------------------------~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.++|+++++.... .+.+|+.++..+|++|+++++++|++++++
T Consensus 320 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 320 RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 457888899999998763210 168999999999999999999999998864
No 103
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=97.11 E-value=0.0011 Score=44.52 Aligned_cols=64 Identities=14% Similarity=0.072 Sum_probs=46.6
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCCC----CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGFY----GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~~----~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++..+++....+ ....++.+.++ ++|+++.++... .+.+|++++ .+++++++++++|.+++++
T Consensus 334 ~~~~~~~~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 334 AFYIFPKIEVGPW---KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp SSEECCEECSCSC---SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCccCC---CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 6666666642100 12456778887 899999875321 578999998 8999999999999998863
No 104
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.10 E-value=0.0017 Score=43.75 Aligned_cols=61 Identities=15% Similarity=0.063 Sum_probs=46.6
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHc------CceeeecCC-------CCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQM------GVLIGKGGF-------YGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~------Gll~~~~g~-------~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
.|++..+++. +. ....+.+.+.++ |+++.++.. ..+.+|+.++ .+++++++++++|+++
T Consensus 327 ~~~~~~~~~~-~~-----~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~ 398 (409)
T 2gb3_A 327 GAFYITAELP-VE-----DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEG 398 (409)
T ss_dssp BSSEEEEECS-SS-----CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred eeEEEEEEeC-CC-----CHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHH
Confidence 3677777774 11 245678888877 999987521 2579999999 8999999999999998
Q ss_pred Hh
Q 042283 79 MT 80 (82)
Q Consensus 79 l~ 80 (82)
++
T Consensus 399 l~ 400 (409)
T 2gb3_A 399 LK 400 (409)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 105
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=97.10 E-value=0.0024 Score=42.55 Aligned_cols=72 Identities=8% Similarity=-0.035 Sum_probs=50.7
Q ss_pred Cceeeecccc-eEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 4 GTIGDARGWG-FMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 4 ~~v~~vRg~G-lm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|.+.-+++.| ++..+++..... ....+.+.+. ++|+++.++.. ..+.+|++++. ++++++++++++.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 384 (390)
T 1d2f_A 311 PELNWQIPQSTYLAWLDLRPLNI----DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLIN 384 (390)
T ss_dssp SSCCCCCCSBCSEEEEECGGGCC----CHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred CCCEEecCCccEEEEEEccccCC----CHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 4344455554 555677743200 2456888888 68999987532 25799999997 58999999999999
Q ss_pred hHhc
Q 042283 78 SMTK 81 (82)
Q Consensus 78 ~l~~ 81 (82)
++++
T Consensus 385 ~l~~ 388 (390)
T 1d2f_A 385 AIRA 388 (390)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8864
No 106
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=97.09 E-value=0.0014 Score=44.24 Aligned_cols=64 Identities=14% Similarity=0.172 Sum_probs=49.2
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCC----CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFY----GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~----~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
..|++..+++. .. ....+.+.+.++|+++.+.... .+.+|++++.+ +++++++++++|.+++++
T Consensus 369 ~~~~~~~~~~~-~~-----~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~-~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 369 ADGFYFTVGYK-GM-----DSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLL-PESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CSSSEEEEEET-TC-----CHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSS-CGGGHHHHHHHHHHHHHH
T ss_pred ceeEEEEEecC-CC-----CHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 45777777774 21 3557888899999999875321 17899999955 999999999999998753
No 107
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=97.09 E-value=0.0016 Score=43.43 Aligned_cols=65 Identities=14% Similarity=0.209 Sum_probs=47.6
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecC--CCCCEEEEecCcccCHHH-HHHHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGG--FYGNVFRIAPPLCFTKED-ANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g--~~~~~i~~~PPL~i~~~e-id~~~~~l~~~l~~ 81 (82)
.|.+..+.+.++. ....+.+.+.++ |+.+.++. ..++.+|+.++...+++| +++++++|++++++
T Consensus 321 ~~~~~~~~~~~~~-----~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 321 MPVVTCVEIPGGI-----DGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp CTTEEEEECCTTC-----CHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC-----CHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 3677777774221 255788888876 99988642 246899999976666666 99999999998763
No 108
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=97.09 E-value=0.0022 Score=42.57 Aligned_cols=69 Identities=9% Similarity=-0.039 Sum_probs=49.9
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCC-----------------------CCEEEEecCcccCHH
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFY-----------------------GNVFRIAPPLCFTKE 66 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~-----------------------~~~i~~~PPL~i~~~ 66 (82)
++.+.+..+++..+.. ......+.+.+.++|+.+++.... .+.+|+.+...+|++
T Consensus 293 ~~~~~~~~v~~~~~~~--~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~ 370 (393)
T 1mdo_A 293 IHAWHLFIIRVDEARC--GITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTES 370 (393)
T ss_dssp ECCCSCEEEECCHHHH--SSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHH
T ss_pred CceeEEEEEEeccccc--ccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHH
Confidence 4556677787752000 012557888899999988763211 247999999999999
Q ss_pred HHHHHHHHHHHhHh
Q 042283 67 DANYLVDVMDCSMT 80 (82)
Q Consensus 67 eid~~~~~l~~~l~ 80 (82)
|++.++++|++++.
T Consensus 371 ~i~~~~~~l~~~~~ 384 (393)
T 1mdo_A 371 DFDRVITALHQIAG 384 (393)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 109
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=97.09 E-value=0.0025 Score=42.50 Aligned_cols=60 Identities=18% Similarity=0.136 Sum_probs=46.0
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
|++..+++... ....+.+.+.++|+++.++.. ..+.+|+... .+++++++++++|.++++
T Consensus 333 ~~~~~~~~~~~------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 333 AFYMFVKALED------DSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp SSEEEEECSSS------CHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCC------CHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 56566766321 245677888999999988532 2579999985 699999999999999885
No 110
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=97.08 E-value=0.0031 Score=41.68 Aligned_cols=69 Identities=13% Similarity=0.138 Sum_probs=49.3
Q ss_pred CCceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 3 YGTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 3 ~~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
+|.+.-++..|.++.+++..+ ...+.+.+.++|+++.++.. ..+.+|++. .+++|++++++++++.
T Consensus 287 ~~~~~~~~~~g~~~~~~~~~~-------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~ 356 (364)
T 1lc5_A 287 LPLLTVYPGRANYLLLRCERE-------DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAI---RSAAQNERLLAALRNV 356 (364)
T ss_dssp STTEEECCCSSSEEEEEESCT-------TCCHHHHHHTTTEECEECTTSTTCCTTEEEEEC---CCHHHHHHHHHHHHHH
T ss_pred CCCCEECCCCCeEEEEECCCc-------HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEe---CCHHHHHHHHHHHHHH
Confidence 344554567788888877432 22477788899999988542 257999994 4799999999999988
Q ss_pred Hhc
Q 042283 79 MTK 81 (82)
Q Consensus 79 l~~ 81 (82)
+++
T Consensus 357 ~~~ 359 (364)
T 1lc5_A 357 LTG 359 (364)
T ss_dssp C--
T ss_pred hhc
Confidence 753
No 111
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=97.07 E-value=0.0021 Score=42.79 Aligned_cols=63 Identities=13% Similarity=0.137 Sum_probs=46.6
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++..+++.... ..+..+.+.++++ |+++.++.. ..+.+|++++. +++++++++++|++++++
T Consensus 313 ~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 313 AFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp TTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 477777774311 1245677887775 999987532 25689999988 899999999999998864
No 112
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=97.01 E-value=0.0015 Score=43.63 Aligned_cols=64 Identities=20% Similarity=0.231 Sum_probs=46.9
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|.+..+++.. ......+.+.++ ++|+++.++.. ..+.+|+++++..|++|+++++++|++++++
T Consensus 330 ~~~~~~~~~~-----~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 330 SHIVPVVIGD-----PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp SSCEEEECCC-----HHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred CCeEEEEeCC-----hHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 3466676632 123557888886 78999987531 1258999999999999999999999998753
No 113
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=97.01 E-value=0.0047 Score=40.42 Aligned_cols=62 Identities=26% Similarity=0.246 Sum_probs=47.9
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC--CCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG--FYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g--~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+++.|.++.+++.. ....+.+.+.++|+++. +. ...+.+|++.. +++|+++++++|++++++
T Consensus 288 ~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~-g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 288 LPSEGNFVFHQLVV-------PLKDYQTHMADAGVLIG-RAFPPADNWCRISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp CCCCSSEEEEECSS-------CHHHHHHHHHHTTEECC-CCCTTCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred CCCCceEEEEECCC-------CHHHHHHHHHHCCEEEe-ecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 45678888887743 24568888899999987 21 13689999954 899999999999999864
No 114
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=97.00 E-value=0.0013 Score=44.00 Aligned_cols=67 Identities=13% Similarity=0.138 Sum_probs=48.1
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC--------CCCCEEEEecCcccC----HHHHHHHHHHHHHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG--------FYGNVFRIAPPLCFT----KEDANYLVDVMDCS 78 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g--------~~~~~i~~~PPL~i~----~~eid~~~~~l~~~ 78 (82)
+.+.+..+++.... .....+.+.+.++|+++.+.. ...+.+|+.||...+ ++++++++++|+++
T Consensus 318 ~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~ 393 (425)
T 3ecd_A 318 TDNHLLLVDLRPKG----LKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEV 393 (425)
T ss_dssp CSSSEEEEECGGGT----CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCC----CCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence 35667777764321 124567778888999998321 123689999988776 99999999999998
Q ss_pred Hhc
Q 042283 79 MTK 81 (82)
Q Consensus 79 l~~ 81 (82)
+++
T Consensus 394 l~~ 396 (425)
T 3ecd_A 394 FEA 396 (425)
T ss_dssp HHH
T ss_pred Hhc
Confidence 853
No 115
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=97.00 E-value=0.0025 Score=42.48 Aligned_cols=71 Identities=10% Similarity=-0.002 Sum_probs=49.7
Q ss_pred CceeeecccceE-EEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 4 GTIGDARGWGFM-LGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 4 ~~v~~vRg~Glm-~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|.+..+++.|.+ ..+++.... .....+.+.++ ++|+++.++.. ..+.+|++++.. +++++++++++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~--~~~l~~~l~~l~~ 388 (399)
T 1c7n_A 315 PEIKAPLIEGTYLQWIDFRALK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP--SSVIQESLERLNK 388 (399)
T ss_dssp TTSBCCCCSBSSEEEEECGGGC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHHHH
T ss_pred CCCeEecCCceEEEEEEcccCC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC--HHHHHHHHHHHHH
Confidence 444445565544 457775311 02456788887 68999987532 257999999975 8999999999999
Q ss_pred hHh
Q 042283 78 SMT 80 (82)
Q Consensus 78 ~l~ 80 (82)
+++
T Consensus 389 ~l~ 391 (399)
T 1c7n_A 389 ALK 391 (399)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 116
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=96.99 E-value=0.0012 Score=45.31 Aligned_cols=50 Identities=14% Similarity=0.330 Sum_probs=36.2
Q ss_pred HHHHHHHHHcCceee----ec----CCCCCEEEEecCcc----cCHHHHHHHHHHHHHhHhc
Q 042283 32 LDVMDKMKQMGVLIG----KG----GFYGNVFRIAPPLC----FTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 32 ~~v~~~~~~~Gll~~----~~----g~~~~~i~~~PPL~----i~~~eid~~~~~l~~~l~~ 81 (82)
..+.+.+.++|+++. +. ...++.+|+.||.+ ++++|+++++++|++++++
T Consensus 352 ~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 352 QAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp HHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 345566667799987 22 12356789988877 7899999999999999864
No 117
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=96.95 E-value=0.0091 Score=39.11 Aligned_cols=69 Identities=9% Similarity=0.115 Sum_probs=51.3
Q ss_pred CceeeecccceEEEEEeeeCCCCchHHHHHHHHHHHH-cCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 4 GTIGDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQ-MGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 4 ~~v~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~-~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
|.+.-....|.++.+++... ....+.+.+.+ +|+++.++.. ..+.+|++.. +++|+++++++|++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~ 338 (350)
T 3fkd_A 268 DGVEVHPSGTTFFLLRLKKG------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETF 338 (350)
T ss_dssp TTEEECCCSSSEEEEEESSS------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CCcEECCCCCcEEEEECCCC------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHH
Confidence 44444556778877777532 25578888888 9999987532 2679999965 889999999999988
Q ss_pred Hhc
Q 042283 79 MTK 81 (82)
Q Consensus 79 l~~ 81 (82)
+++
T Consensus 339 ~~~ 341 (350)
T 3fkd_A 339 LEK 341 (350)
T ss_dssp HTC
T ss_pred HHH
Confidence 764
No 118
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=96.95 E-value=0.0039 Score=41.81 Aligned_cols=76 Identities=9% Similarity=0.016 Sum_probs=50.1
Q ss_pred Cceeeecc-cceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 4 GTIGDARG-WGFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 4 ~~v~~vRg-~Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
|.+.-++. .|+++.+++....-........+.+.++ ++|+++.++.. ..+.+|+++ ..+++++++++++|.+++
T Consensus 333 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~--~~~~e~l~~~l~~l~~~l 410 (416)
T 1bw0_A 333 IGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT--TRPVEVYREAVERIKAFC 410 (416)
T ss_dssp TTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC--CSCHHHHHHHHHHHHHHH
T ss_pred CCCcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHH
Confidence 44443433 3777777774210000012456777774 89999987532 257899999 478999999999999988
Q ss_pred hc
Q 042283 80 TK 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 411 ~~ 412 (416)
T 1bw0_A 411 QR 412 (416)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 119
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=96.95 E-value=0.0019 Score=42.33 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcCceeeecCCC---------------------CCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKGGFY---------------------GNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~---------------------~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.+.++|+.++++... .+.+|+.+....|++|+++++++|+++++
T Consensus 301 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~ 371 (382)
T 4hvk_A 301 GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 456788899999998864210 47899999999999999999999999875
No 120
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=96.95 E-value=0.0013 Score=43.35 Aligned_cols=64 Identities=14% Similarity=0.200 Sum_probs=47.1
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC---C------------------CCCEEEEecCcccCHHHHHH
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG---F------------------YGNVFRIAPPLCFTKEDANY 70 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g---~------------------~~~~i~~~PPL~i~~~eid~ 70 (82)
.+.+..+.+.. . ....+.+.+.++|+++.+.. . ..+.+|+.+....|++|+++
T Consensus 291 ~~~~~~~~~~~-~-----~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~ 364 (384)
T 1eg5_A 291 LPNTLSVSFPN-I-----RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDY 364 (384)
T ss_dssp CTTEEEEECTT-C-----CHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHH
T ss_pred CCCEEEEEeCC-C-----CHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHH
Confidence 35566666531 1 24567888889999998731 1 13689999999999999999
Q ss_pred HHHHHHHhHhc
Q 042283 71 LVDVMDCSMTK 81 (82)
Q Consensus 71 ~~~~l~~~l~~ 81 (82)
++++|++++++
T Consensus 365 ~~~~l~~~~~~ 375 (384)
T 1eg5_A 365 FLKKIEEILSF 375 (384)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998853
No 121
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=96.94 E-value=0.0017 Score=43.74 Aligned_cols=62 Identities=11% Similarity=0.062 Sum_probs=46.8
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++..+++.... ....+.+.++ ++|+++.++.. ..+.+|+.++. +++++++++++|.+++++
T Consensus 336 g~~~~~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 336 GIYVWLETPPGY-----DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp SSEEEEECCTTC-----CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred ceEEEEeCCCCC-----CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 677778874221 2446777777 57999987532 25799999996 789999999999998864
No 122
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=96.94 E-value=0.003 Score=42.83 Aligned_cols=67 Identities=16% Similarity=0.145 Sum_probs=48.9
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC-------CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF-------YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~-------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...|++..+++..... ....+.+.+.++|+++.++.. ..+.+|+.+.. .+++++++++++|.+++++
T Consensus 350 p~~g~~~~~~~~~~~~----~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 350 PAAGMFLWIKVKGIND----VKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp CSBSSEEEEEETTCSC----CHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEeCCCCC----HHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence 3568888888853211 112256778899999987532 14789999884 5999999999999998864
No 123
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=96.92 E-value=0.0015 Score=43.09 Aligned_cols=69 Identities=10% Similarity=0.109 Sum_probs=46.4
Q ss_pred eeeecccc-eEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 6 IGDARGWG-FMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 6 v~~vRg~G-lm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
+.-++..| ++..+++..... ...+...++++ |+++.++.. ..+.+|++++. +++++++++++|++++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~--~~e~i~~~l~~l~~~l 373 (377)
T 3fdb_A 301 AKITPMQATYLMWIDFRDTTI-----EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT--SREVLEEAIDRMAKAV 373 (377)
T ss_dssp CEECCCSBCSEEEEECTTSCC-----CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred ceEecCCeeEEEEEECcccCC-----CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC--CHHHHHHHHHHHHHHH
Confidence 33334444 444577743211 12456666665 999987532 25899999884 8999999999999998
Q ss_pred hc
Q 042283 80 TK 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 374 ~~ 375 (377)
T 3fdb_A 374 SH 375 (377)
T ss_dssp TT
T ss_pred hh
Confidence 75
No 124
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=96.90 E-value=0.0028 Score=42.11 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=46.5
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecCC--CCCEEEEec-CcccCHHHHHHHHHHHHHhHh
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGGF--YGNVFRIAP-PLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g~--~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~ 80 (82)
+.+..+.+.... ....+.+.+.++ |+.+.++.. ..+.+|++| +++.+++++++++++|+++++
T Consensus 327 ~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 327 PTLTTVCIPDGV-----DGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp SSEEEEECCTTC-----CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred CcEEEEEcCCCC-----CHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 345566652211 245688888887 999987531 368999995 788899999999999999874
No 125
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=96.90 E-value=0.0024 Score=42.11 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCceeeecCC-------------------------CCCEEEEecCcccCHHHHHHHHHHHHHhHhcC
Q 042283 31 TLDVMDKMKQMGVLIGKGGF-------------------------YGNVFRIAPPLCFTKEDANYLVDVMDCSMTKK 82 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~-------------------------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~~ 82 (82)
...+.+.+.++|+.+++... ..+.+|+.+...+|++|+++++++|+++++++
T Consensus 295 ~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 295 RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 45788889999998876420 01789999999999999999999999998753
No 126
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=96.90 E-value=0.0042 Score=41.77 Aligned_cols=65 Identities=12% Similarity=0.060 Sum_probs=47.1
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHH-cCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQ-MGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~-~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++..+++..... ......+.+.+++ +|+++.++.. ..+.+|++++. ++++++++++++.+++++
T Consensus 328 g~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 328 SMYVWAKIPEPYA--HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp SSEEEEECCTTTG--GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEcCCccC--CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 7777788742110 0024567777765 7999987532 25799999997 899999999999998853
No 127
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=96.83 E-value=0.0026 Score=41.85 Aligned_cols=62 Identities=16% Similarity=0.169 Sum_probs=47.2
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC---------------------CCCEEEEecCcccCHHHHHHH
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF---------------------YGNVFRIAPPLCFTKEDANYL 71 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~---------------------~~~~i~~~PPL~i~~~eid~~ 71 (82)
|.+..+.+. +. ....+.+.+.++|+.+.+... ..+.+|+.+....|++|++++
T Consensus 289 ~~~~~~~~~-~~-----~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~ 362 (382)
T 4eb5_A 289 PNNVNVRFS-YI-----EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRL 362 (382)
T ss_dssp TTEEEEEET-TS-----CHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHH
T ss_pred CCEEEEEeC-Cc-----CHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHH
Confidence 556666663 11 245678888899999876421 147999999999999999999
Q ss_pred HHHHHHhHh
Q 042283 72 VDVMDCSMT 80 (82)
Q Consensus 72 ~~~l~~~l~ 80 (82)
+++|+++++
T Consensus 363 ~~~l~~~~~ 371 (382)
T 4eb5_A 363 LEVLPGVIE 371 (382)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 128
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=96.79 E-value=0.0032 Score=41.61 Aligned_cols=59 Identities=12% Similarity=0.004 Sum_probs=45.2
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
|++..+++.. ....+.+.+. ++|+++.++.. ..+.+|+.++ .+++++++++++|+++++
T Consensus 306 ~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 306 AYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp TTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred ceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 6666666632 1456778887 78999987531 2578999999 599999999999999885
No 129
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=96.74 E-value=0.0034 Score=41.83 Aligned_cols=60 Identities=12% Similarity=0.088 Sum_probs=45.2
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC-----------CCCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG-----------FYGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g-----------~~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
+.+..+++.. . ....+.+.+.++|++++++. ...+.+|+.++...|++|+++++++|+++
T Consensus 335 ~~~~~~~~~~-~-----~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 335 IPVVSFAVHK-V-----PADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp CSEEEEEETT-B-----CHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred CCEEEEEECC-c-----CHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 4467776631 1 24567888889999998752 12478999999999999999999998753
No 130
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=96.72 E-value=0.0044 Score=42.93 Aligned_cols=51 Identities=18% Similarity=0.242 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCceeeecCC---CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQMGVLIGKGGF---YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~---~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.++|+.+..... ..+.+||+|+...|++|+++++++|++++++
T Consensus 387 ~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 387 ALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 56788889999998632211 2578999999999999999999999988753
No 131
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=96.71 E-value=0.006 Score=41.43 Aligned_cols=61 Identities=15% Similarity=0.103 Sum_probs=45.1
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHc-CceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQM-GVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~-Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|+++-+++. .. ....+.+.++++ ||++.++.. ..+.+||+ +..+++++++++++|++++++
T Consensus 374 ~~~~~~~~~-~~-----~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 374 APYIWVGFP-GK-----PSWDVFAEILERCNIVTTPGSGYGPAGEGFVRAS--AFGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp SSEEEEECT-TS-----CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHC-
T ss_pred eeEEEEECC-CC-----CHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 667767664 21 245677777765 999987531 25899999 777999999999999999864
No 132
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=96.69 E-value=0.0092 Score=39.30 Aligned_cols=63 Identities=16% Similarity=0.042 Sum_probs=47.9
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+..|.++.+++... ....+.+.+.++|+++++++. ..+.+|++.. +++|+|++++++++..+
T Consensus 289 ~~~~~~~~~~~~~~~------~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 289 IPSQGNYLFATPPDR------DGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp CCCSSSEEEEECTTC------CHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred cCCCccEEEEECCCC------CHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence 456677777765321 245778889999999987642 3478999966 99999999999998764
No 133
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=96.60 E-value=0.006 Score=40.47 Aligned_cols=63 Identities=14% Similarity=0.108 Sum_probs=46.4
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++..+++.... .....+.+.+. ++|+++.++.. ..+.+|+.++. +++++++++++|.+++++
T Consensus 318 ~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 318 AFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT--AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp TTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 666666663211 12456888887 89999987532 25789999885 999999999999999864
No 134
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=96.59 E-value=0.0092 Score=39.49 Aligned_cols=59 Identities=14% Similarity=0.235 Sum_probs=45.1
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC---CCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF---YGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~---~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
..+.|.++.+++. ....+.+.+.++|+++++++. ..+.+|++++ +++|+++++++|++.
T Consensus 293 ~~~~~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 293 FDSETNYILARFK--------ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREESQRVIDALRAE 354 (356)
T ss_dssp CCCSSSEEEEEET--------THHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHHHHHHTC
T ss_pred CCCCCeEEEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 3556788877774 134678888899999998542 1368999987 799999999999764
No 135
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=96.57 E-value=0.0071 Score=40.37 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=46.1
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++..+++. . ....+.+.++ ++|+++.++.. .++.+|++++. ++++++++++.+.+++++
T Consensus 326 ~~~~~~~~~--~-----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 326 AFYLFFKVR--G-----DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT--SIERLTEALDRIEDFLNS 388 (389)
T ss_dssp SSEEEEECS--S-----CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS--CHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEeCC--C-----CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 666666663 1 2456788887 89999987532 14699999994 999999999999999875
No 136
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=96.57 E-value=0.0081 Score=39.88 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=44.6
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----------CCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----------YGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----------~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
|++..+++... ....+.+.++ ++|+++.++.. ..+.+|+++.. +++++++++++|.+++
T Consensus 326 ~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 326 SFYIWLKVPDG------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVATCVKAAEDIVSLY 395 (396)
T ss_dssp SSEEEEECTTS------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred eEEEEEECCCC------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 78888887531 2446677775 57999987431 35799999876 9999999999999876
No 137
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=96.53 E-value=0.0054 Score=40.65 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=43.5
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC------CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF------YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
|++..+++... . +...+.++|+++.++.. ..+.+|+.++. +++++++++++|++++++
T Consensus 307 ~~~~~~~~~~~--------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 307 TYFLMAELPGW--------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRVVNS 370 (381)
T ss_dssp SSEEEEECTTC--------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC--
T ss_pred ceEEEEecChH--------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 67777776321 1 56677899999987531 25799999987 999999999999998764
No 138
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=96.51 E-value=0.0087 Score=40.60 Aligned_cols=75 Identities=9% Similarity=0.045 Sum_probs=49.2
Q ss_pred Cceeeec-ccceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 4 GTIGDAR-GWGFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 4 ~~v~~vR-g~Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
|.+.-++ ..|++..+++....-........+++.++ ++||++.++.. ..+.+|+. +..+++++++++++|.+++
T Consensus 344 ~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis--~~~~~e~i~~~l~~l~~~l 421 (427)
T 3dyd_A 344 PGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVV--ITVPEVMMLEACSRIQEFC 421 (427)
T ss_dssp TTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEE--SCSCHHHHHHHHHHHHHHH
T ss_pred CCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEE--ECCCHHHHHHHHHHHHHHH
Confidence 4444333 34666666774211000012456677775 89999987531 36899999 5589999999999999988
Q ss_pred h
Q 042283 80 T 80 (82)
Q Consensus 80 ~ 80 (82)
+
T Consensus 422 ~ 422 (427)
T 3dyd_A 422 E 422 (427)
T ss_dssp H
T ss_pred H
Confidence 5
No 139
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=96.50 E-value=0.009 Score=38.90 Aligned_cols=60 Identities=13% Similarity=0.095 Sum_probs=46.5
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC--CCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG--FYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g--~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
+.+..+.+.. ....+.+.+.++|+.+.++. ..++.+|+.+....+++++++++++|++.+
T Consensus 300 ~~~~~~~~~~-------~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 300 MTTIVANTTM-------LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp SSEEEEEESS-------CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CceEEEecCC-------CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 4455555532 25578889999999998631 246899999999999999999999998865
No 140
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=96.48 E-value=0.0042 Score=43.28 Aligned_cols=49 Identities=12% Similarity=0.097 Sum_probs=40.5
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecC-cccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPP-LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PP-L~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.+.++|+++... ..++.+|+++. +..+++++++++++|+++++
T Consensus 418 ~~~l~~~L~~~Gi~v~g~-~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~ 467 (514)
T 3mad_A 418 IYQVMEEMAGRGWRLNGL-HRPPAFHVALTLRHTEPGVVDRFLADLQDAVA 467 (514)
T ss_dssp HHHHHHHHHTTTCBCEEE-TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEeccC-CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 567888999999988433 34788999987 77888999999999999875
No 141
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=96.45 E-value=0.0054 Score=41.23 Aligned_cols=47 Identities=17% Similarity=0.139 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
..++.+.+.++|+++.++ ++.+||+-. .++++++++++++|++++++
T Consensus 368 ~~~~~~~l~~~gi~v~~g---~~~iRis~~-~~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 368 ANAICEELKKEHIYVIAL---ANGIRIAAC-GIPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp HHHHHHHHHHTTEECEEC---SSEEEEEGG-GSCHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEecC---CCCeEEEEe-cCCHHHHHHHHHHHHHHHHH
Confidence 456778889999999986 578999933 47999999999999999863
No 142
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=96.45 E-value=0.0068 Score=40.20 Aligned_cols=49 Identities=10% Similarity=0.108 Sum_probs=39.3
Q ss_pred HHHHHHHHHH-cCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQ-MGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~-~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.+ +|+++.++.. ..+.+|++++ .+++++++++++|.+++++
T Consensus 335 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 335 SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp HHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 4567888876 7999987532 2578999987 5999999999999998753
No 143
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.0038 Score=43.15 Aligned_cols=49 Identities=8% Similarity=0.147 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 30 ETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+..+.+.+.++|+.+.... ..+.+|+.++ .+|+++++++++.|+++++
T Consensus 387 ~~~~l~~~L~~~Gi~v~~~~-~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~ 435 (497)
T 3mc6_A 387 NIHELSDRLSKKGWHFNALQ-KPVALHMAFT-RLSAHVVDEICDILRTTVQ 435 (497)
T ss_dssp THHHHHHHHHTTTCBCEECC-SSCCEEEECC-TTTTCTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEEecCC-CCCeEEEEEe-CCCHHHHHHHHHHHHHHHH
Confidence 35678999999999887653 4567899999 8899999999999999875
No 144
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=95.39 E-value=0.00054 Score=45.85 Aligned_cols=71 Identities=13% Similarity=0.145 Sum_probs=48.6
Q ss_pred CceeeecccceEEE-EEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 4 GTIGDARGWGFMLG-VEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 4 ~~v~~vRg~Glm~g-ie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|.+..++..|.|.. +++.... .....+.+.++ ++|+++.++.. ..+.+|+. +..+++++++++++|++
T Consensus 315 ~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~e~i~~~l~~l~~ 388 (392)
T 3b1d_A 315 PRLKVMKPQGTYLIWLDFSDYG----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLN--IAAPKSLVEEICKRIVC 388 (392)
Confidence 44455566666665 6764311 12346778886 78999987532 24679988 44578999999999999
Q ss_pred hHh
Q 042283 78 SMT 80 (82)
Q Consensus 78 ~l~ 80 (82)
+++
T Consensus 389 ~l~ 391 (392)
T 3b1d_A 389 CLP 391 (392)
Confidence 875
No 145
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=96.27 E-value=0.0053 Score=40.43 Aligned_cols=62 Identities=18% Similarity=0.111 Sum_probs=46.2
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC---CCCEEEEe-cC---cccCHHHHHHHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF---YGNVFRIA-PP---LCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~---~~~~i~~~-PP---L~i~~~eid~~~~~l~~~l~~ 81 (82)
.|.+..+++.. ...+.+.+.++|+.+.++.. ..+.+|++ .+ +..|++|+++++++|++++++
T Consensus 315 ~~~~~~~~~~~--------~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 315 AHGLTAVYVAD--------PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp CSSCEEEECSC--------HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CCceEEEecCC--------HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 45666666621 45678888899999987431 25789998 33 468999999999999998764
No 146
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=96.26 E-value=0.0063 Score=40.53 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=48.4
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC----------------------CCCEEEEecCcccCHHH
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF----------------------YGNVFRIAPPLCFTKED 67 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~----------------------~~~~i~~~PPL~i~~~e 67 (82)
+..+.+..+.+....+ .....+.+.+.++|+.+++... ..+++++.+...+|++|
T Consensus 302 ~~~~~~~~i~~~~~~~---~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~ed 378 (391)
T 3dr4_A 302 RHVFWMYTVRLGEGLS---TTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEAD 378 (391)
T ss_dssp CCCCSSEEEEECSSCS---SCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHH
T ss_pred cceeEEEEEEECCccc---hhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHH
Confidence 3445556676643111 1356788999999999886420 13689999999999999
Q ss_pred HHHHHHHHHHhH
Q 042283 68 ANYLVDVMDCSM 79 (82)
Q Consensus 68 id~~~~~l~~~l 79 (82)
+|.++++|++++
T Consensus 379 i~~~~~~l~~~l 390 (391)
T 3dr4_A 379 IDRVIAALDQVL 390 (391)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 147
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=96.22 E-value=0.02 Score=39.68 Aligned_cols=69 Identities=7% Similarity=0.001 Sum_probs=48.3
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC--CCCEEEEec-CcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF--YGNVFRIAP-PLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~--~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~~ 81 (82)
+.+..+.+.............+.+.+.++|+++.+... ....+|+++ +...|++|++++++.|++++++
T Consensus 424 ~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 424 LSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp SSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 34777777532211123445677888999998764211 235899987 8899999999999999998753
No 148
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=96.21 E-value=0.015 Score=39.62 Aligned_cols=49 Identities=14% Similarity=0.040 Sum_probs=40.2
Q ss_pred HHHHHHHHHHcCcee--eecC-CCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 31 TLDVMDKMKQMGVLI--GKGG-FYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~--~~~g-~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
...+.+.+.++|+.+ .+.. ...+.+|+++....|++|+++++++|++++
T Consensus 386 ~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 386 PEAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 567888899999988 3321 126799999999999999999999998865
No 149
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=96.05 E-value=0.011 Score=39.59 Aligned_cols=65 Identities=6% Similarity=0.058 Sum_probs=45.4
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC---------------CCCEEEEecCcccCHHHHHHHHHHH
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF---------------YGNVFRIAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~---------------~~~~i~~~PPL~i~~~eid~~~~~l 75 (82)
.|++..+++..... .....+.+.+. ++|+++.++.. ..+.+||++.. +++++++++++|
T Consensus 315 ~g~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~~~~l 389 (411)
T 2o0r_A 315 GTYFLCADPRPLGY---DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK--RDDTLDEAIRRL 389 (411)
T ss_dssp BSSEEEEECGGGTC---CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS--CHHHHHHHHHHH
T ss_pred eeEEEEEecCCCCC---CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 47788888853110 02446777776 68999987521 24679999863 899999999999
Q ss_pred HHhHhc
Q 042283 76 DCSMTK 81 (82)
Q Consensus 76 ~~~l~~ 81 (82)
.+++++
T Consensus 390 ~~~~~~ 395 (411)
T 2o0r_A 390 SVLAER 395 (411)
T ss_dssp GGGGC-
T ss_pred HHHHhc
Confidence 988753
No 150
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=96.04 E-value=0.0065 Score=40.73 Aligned_cols=63 Identities=14% Similarity=0.030 Sum_probs=41.8
Q ss_pred cceEEEEE-eeeCCCCchHHHHHHHHHHHH-cCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 12 WGFMLGVE-FVTDSQLRKAETLDVMDKMKQ-MGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie-~~~~~~~~~~~~~~v~~~~~~-~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.|++..++ +.... ....+...+++ +|+++.++.. ..+.+|++ +..+++++++++++|++++++
T Consensus 324 ~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 324 HAPYLWVKPTQANI-----SDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFS--SLGKREDILAACERLQMAPAL 392 (400)
T ss_dssp SSSEEEEECCCTTC-----CTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEE--CCSCHHHHHHHHHHHHC----
T ss_pred CceEEEEeccCCCC-----CHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEE--eeCCHHHHHHHHHHHHHHHHh
Confidence 37777787 53211 12246666664 5999987532 25789999 788999999999999988864
No 151
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=96.03 E-value=0.034 Score=37.38 Aligned_cols=62 Identities=13% Similarity=0.032 Sum_probs=45.0
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeec--C--------------------------CCCCEEEEecCc
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKG--G--------------------------FYGNVFRIAPPL 61 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~--g--------------------------~~~~~i~~~PPL 61 (82)
++.|.|+++++.. ....+.+.+.+.|+..+.. | ...+.||+++++
T Consensus 308 ~~~~~~~~~~l~~-------~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~ 380 (398)
T 1gc0_A 308 SQPGGMIAFELKG-------GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGL 380 (398)
T ss_dssp -CCTTEEEEEETT-------HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCS
T ss_pred CCCceEEEEEECC-------CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCc
Confidence 5789999998842 1224555666778776541 1 114899999999
Q ss_pred ccCHHHHHHHHHHHHHh
Q 042283 62 CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~ 78 (82)
..++++++.+.++|+++
T Consensus 381 ~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 381 EDIDDLLADVQQALKAS 397 (398)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhc
Confidence 99999999999998875
No 152
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=96.02 E-value=0.019 Score=38.08 Aligned_cols=60 Identities=10% Similarity=0.094 Sum_probs=42.6
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC------CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF------YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~------~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|+++.+++..... .....+.+.+. ++|+++.++.. ..+.+|++++. +++++++++++|++
T Consensus 319 g~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 319 TYFLLVDYSAVST---LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK--KESTLLAAAERLRQ 385 (386)
T ss_dssp SSEEEEECTTTCC---SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS--CHHHHHHHHHHHTT
T ss_pred eEEEEEecCCCCC---CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC--CHHHHHHHHHHHhh
Confidence 7788888743200 02446777776 68999987531 35789999983 89999999998864
No 153
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=95.99 E-value=0.043 Score=36.13 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=46.5
Q ss_pred Cceeeeccc-ceEEEEEeeeCCCCchHHHHHHHHHH-HHcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 4 GTIGDARGW-GFMLGVEFVTDSQLRKAETLDVMDKM-KQMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 4 ~~v~~vRg~-Glm~gie~~~~~~~~~~~~~~v~~~~-~~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
|.+..++.. |.+.-+.+..+. ....+...+ .++|+++.++.. ..+.+|+. +..+++++++++++|++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~--~~~~~~~i~~~l~~l~~~l 368 (375)
T 3op7_A 296 PLVSYIRPAVVSTSFVKIAVDM-----PMEDFCLQLLQEHGVLLVPGNRFERDGYVRLG--FACEQETLIKGLEKLSQFL 368 (375)
T ss_dssp TTEEECCCSSSSCEEEEECCSS-----CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEC--CCSCHHHHHHHHHHHHHHH
T ss_pred CCceEecCCCeEEEeEEcCCCC-----CHHHHHHHHHHhCCEEEeChhhhCCCCeEEEE--ecCCHHHHHHHHHHHHHHH
Confidence 444444444 344444453221 245566666 588999987642 25889998 4566799999999999998
Q ss_pred hc
Q 042283 80 TK 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 369 ~~ 370 (375)
T 3op7_A 369 RR 370 (375)
T ss_dssp GG
T ss_pred HH
Confidence 63
No 154
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=95.94 E-value=0.021 Score=37.51 Aligned_cols=51 Identities=18% Similarity=0.046 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 30 ETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
....+.+.+.++|+.+.+.....+.+|++.-...+++|++++++.|++.++
T Consensus 309 ~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 309 LEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKR 359 (362)
T ss_dssp HHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 356788888999998765422346799998888899999999999998775
No 155
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=95.93 E-value=0.0049 Score=41.41 Aligned_cols=65 Identities=11% Similarity=0.075 Sum_probs=44.5
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC-------------------------CCCCEEEEecCcccC
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG-------------------------FYGNVFRIAPPLCFT 64 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g-------------------------~~~~~i~~~PPL~i~ 64 (82)
++.|.|..+++... ...+..+.+.+...|+.+.+++ ...+.+||++++..+
T Consensus 307 ~~~g~~~~~~~~~~----~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~ 382 (398)
T 2rfv_A 307 SLPGGIISFEIAGG----LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDP 382 (398)
T ss_dssp SSCCSEEEEEETTH----HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCH
T ss_pred CCCceEEEEEEcCC----HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCH
Confidence 56899999988531 1233445554444555544321 125899999999999
Q ss_pred HHHHHHHHHHHHHh
Q 042283 65 KEDANYLVDVMDCS 78 (82)
Q Consensus 65 ~~eid~~~~~l~~~ 78 (82)
+++++.+.++++++
T Consensus 383 ~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 383 EDIINDLEHAIRKA 396 (398)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 156
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=95.93 E-value=0.026 Score=37.73 Aligned_cols=49 Identities=6% Similarity=0.006 Sum_probs=37.5
Q ss_pred HHHHHHHHH-HcCceeeecCC---------CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMK-QMGVLIGKGGF---------YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~-~~Gll~~~~g~---------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
..++...++ ++||++.++.. ..+.+||+... +++++++++++|++++++
T Consensus 363 ~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 363 DRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC--CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHhh
Confidence 445666654 57999987432 25899998554 999999999999999864
No 157
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=95.88 E-value=0.018 Score=37.72 Aligned_cols=66 Identities=6% Similarity=0.031 Sum_probs=47.1
Q ss_pred ccceEEEEEeeeCCCCchH-HHHHHHHHHHHcCceeeec-CC----------------------CCCEEEEecCcccCHH
Q 042283 11 GWGFMLGVEFVTDSQLRKA-ETLDVMDKMKQMGVLIGKG-GF----------------------YGNVFRIAPPLCFTKE 66 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~-~~~~v~~~~~~~Gll~~~~-g~----------------------~~~~i~~~PPL~i~~~ 66 (82)
+.+.+..+.+.... . ....+.+.+.++|+.++.. .+ ..+.+|+.++...|++
T Consensus 281 ~~~~~~~~~~~~~~----~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~ 356 (375)
T 2fnu_A 281 SSNHLYPILMHQKF----FTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLE 356 (375)
T ss_dssp CCCSCEEEEECGGG----GGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHH
T ss_pred cceEEEEEEeCccc----cchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHH
Confidence 34455566664210 1 3567888889999988721 00 0168999999999999
Q ss_pred HHHHHHHHHHHhHh
Q 042283 67 DANYLVDVMDCSMT 80 (82)
Q Consensus 67 eid~~~~~l~~~l~ 80 (82)
|+++++++|+++++
T Consensus 357 ~i~~~~~~l~~~~~ 370 (375)
T 2fnu_A 357 SVQNIAHSVLKTFE 370 (375)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 158
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=95.81 E-value=0.0051 Score=42.41 Aligned_cols=47 Identities=6% Similarity=0.018 Sum_probs=40.2
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+..+.+.+.++|+.+..++ .+.+|+++++..|++++ +++++|+++++
T Consensus 305 ~~~l~~~L~~~GI~v~~~g--~~~iRi~~~~~~t~e~i-~l~~aL~~~~~ 351 (446)
T 2x3l_A 305 GHDIQNWFMNAHIYLELAD--DYQALAILPLWHHDDTY-LFDSLLRKIED 351 (446)
T ss_dssp HHHHHHHHHHTTEEESEEC--SSCEEEECCCCCTTCCC-CHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEecC--CCEEEEEeecCCCHHHH-HHHHHHHHHHH
Confidence 4578888999999987443 47899999999999999 99999998875
No 159
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=95.78 E-value=0.0063 Score=41.14 Aligned_cols=66 Identities=20% Similarity=0.243 Sum_probs=40.4
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEec-----------------Ccc---cCHHHH
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAP-----------------PLC---FTKEDA 68 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~P-----------------PL~---i~~~ei 68 (82)
.||.|.|++|++..+ ...+..+...+...|+.+..++ ..++...| +++ ++.++.
T Consensus 307 ~~g~g~~~~~~l~~~----~~~~~~~~~~l~~~~~~~s~G~--~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~ 380 (392)
T 3qhx_A 307 MRGFGGMVSVRMRAG----RTAAEQLCAKTNIFILAESLGS--VESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDV 380 (392)
T ss_dssp CSSCCSEEEEEETTC----HHHHHHHHHHCSSSEECSCCCC--SSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCH
T ss_pred CCCCceEEEEEeCCc----HHHHHHHHHhCCCceECCCCCC--CCceeeCcccccccccCHHHcCCCCCeEEEEeccCCH
Confidence 389999999999642 1345667766666665544332 22232222 222 667788
Q ss_pred HHHHHHHHHhHh
Q 042283 69 NYLVDVMDCSMT 80 (82)
Q Consensus 69 d~~~~~l~~~l~ 80 (82)
+++++.++++|+
T Consensus 381 ~~~i~~l~~al~ 392 (392)
T 3qhx_A 381 ADLLDDLKQALG 392 (392)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 888888888763
No 160
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=95.70 E-value=0.03 Score=37.26 Aligned_cols=51 Identities=14% Similarity=0.252 Sum_probs=39.6
Q ss_pred HHHHHHHHHHcCceeeecC--------CCCCEEEEecCcc----cCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQMGVLIGKGG--------FYGNVFRIAPPLC----FTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g--------~~~~~i~~~PPL~----i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.++|+++++.. ...+.+|+.++.. ++++|+++++++|++++++
T Consensus 326 ~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 326 GKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp HHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 4567778889999988542 1236799988855 6799999999999999864
No 161
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=95.67 E-value=0.0058 Score=42.62 Aligned_cols=64 Identities=19% Similarity=0.318 Sum_probs=45.7
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC-------------------------CCCCEEEEecCccc
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG-------------------------FYGNVFRIAPPLCF 63 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g-------------------------~~~~~i~~~PPL~i 63 (82)
.+|.|.|+.+++. + .+....+.+.+...|+.++.++ ...+.+|+++++
T Consensus 373 ~~g~g~~~~~~l~-~----~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~-- 445 (464)
T 1ibj_A 373 AKGAGSVFSFITG-S----VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI-- 445 (464)
T ss_dssp CSCCCSEEEEECS-C----HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--
T ss_pred CCCCceEEEEEEC-C----HHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--
Confidence 4577889999983 1 1234457777666676655432 124689999998
Q ss_pred CHHHHHHHHHHHHHhHhc
Q 042283 64 TKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 64 ~~~eid~~~~~l~~~l~~ 81 (82)
+|++++++.|++++++
T Consensus 446 --edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 446 --EDVDDLISDLDIAFKT 461 (464)
T ss_dssp --SCHHHHHHHHHHHHHS
T ss_pred --CCHHHHHHHHHHHHhh
Confidence 8999999999999864
No 162
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=95.54 E-value=0.033 Score=36.29 Aligned_cols=56 Identities=13% Similarity=0.179 Sum_probs=41.9
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
..|.++.+++.. .....+.+.+.++|+++.+. .+.+|+++. +++|+++++++|+++
T Consensus 279 ~~~~~~~~~~~~------~~~~~~~~~l~~~gi~v~~~---~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 279 SRGNFVFVFMEK------EEKERLLEHLRTKNVAVRSF---REGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp CCSSEEEEECCT------HHHHHHHHHHHHHTEEEEEE---TTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCC------CCHHHHHHHHHHCCEEEEEC---CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 346676676632 13456788888999999883 579999974 578899999998765
No 163
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=95.54 E-value=0.036 Score=37.54 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=42.6
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeec--C--------------------------CCCCEEEEecC
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKG--G--------------------------FYGNVFRIAPP 60 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~--g--------------------------~~~~~i~~~PP 60 (82)
.||.|.|+++++.. ....+.+.+.+.|++.... | ...+.+|+++.
T Consensus 305 ~~~~g~~~~~~~~~-------~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g 377 (404)
T 1e5e_A 305 MRMYGSMITFILKS-------GFEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG 377 (404)
T ss_dssp CSSCCSEEEEEETT-------HHHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECC
T ss_pred CCCCceEEEEEeCC-------CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeC
Confidence 46789999998742 1223445566778865542 1 11478999999
Q ss_pred cccCHHHHHHHHHHHHHhHh
Q 042283 61 LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 61 L~i~~~eid~~~~~l~~~l~ 80 (82)
+ ++++++++.|+++++
T Consensus 378 ~----e~~~~li~~l~~al~ 393 (404)
T 1e5e_A 378 I----EDADELIADFKQGLD 393 (404)
T ss_dssp S----SCHHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHHHH
Confidence 9 889999998888775
No 164
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=95.54 E-value=0.034 Score=37.93 Aligned_cols=66 Identities=14% Similarity=0.135 Sum_probs=45.5
Q ss_pred cccceEEEEEeeeCCCCc----------hHHHHHHHHHHH-HcCceeeecCCC---------CCEEEEecCcccCHHHHH
Q 042283 10 RGWGFMLGVEFVTDSQLR----------KAETLDVMDKMK-QMGVLIGKGGFY---------GNVFRIAPPLCFTKEDAN 69 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~----------~~~~~~v~~~~~-~~Gll~~~~g~~---------~~~i~~~PPL~i~~~eid 69 (82)
..-|+++.+++....... ......+.+.+. ++||++.++... .+.+||+++. ++++++
T Consensus 357 ~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~--~~e~l~ 434 (447)
T 3b46_A 357 PEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK--DDAYLE 434 (447)
T ss_dssp CSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS--CHHHHH
T ss_pred CCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC--CHHHHH
Confidence 345888888884310000 013456777776 589999875311 5899999984 899999
Q ss_pred HHHHHHHH
Q 042283 70 YLVDVMDC 77 (82)
Q Consensus 70 ~~~~~l~~ 77 (82)
+++++|.+
T Consensus 435 ~~~~~l~~ 442 (447)
T 3b46_A 435 NAVERLKL 442 (447)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHH
Confidence 99999977
No 165
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=95.50 E-value=0.045 Score=36.53 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=26.9
Q ss_pred CCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 52 GNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 52 ~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.+|+.+++..|++|+++++++|+++++
T Consensus 369 ~~~iRi~~~~~~t~e~i~~~~~~l~~~~~ 397 (423)
T 3lvm_A 369 HSSIRFSLGRFTTEEEIDYTIELVRKSIG 397 (423)
T ss_dssp HTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 38899999999999999999999999875
No 166
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=95.49 E-value=0.0041 Score=41.29 Aligned_cols=62 Identities=16% Similarity=0.128 Sum_probs=26.8
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC-----------------CC----CCEEEEec-CcccCHHHHHH
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG-----------------FY----GNVFRIAP-PLCFTKEDANY 70 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g-----------------~~----~~~i~~~P-PL~i~~~eid~ 70 (82)
+.++.+.+.. . ....+.+.+. +|+.+++.. .. .+.+||.+ +...|++|+++
T Consensus 316 ~~~~~~~~~~-~-----~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~ 388 (400)
T 3vax_A 316 PHILNLSFED-V-----DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEE 388 (400)
T ss_dssp TTEEEEECTT-C-----CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC---------
T ss_pred CCEEEEEeCC-C-----CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHH
Confidence 4566665532 1 2456777788 888776521 00 38999999 99999999999
Q ss_pred HHHHHHHhHhc
Q 042283 71 LVDVMDCSMTK 81 (82)
Q Consensus 71 ~~~~l~~~l~~ 81 (82)
++++|++++++
T Consensus 389 ~~~~l~~~~~~ 399 (400)
T 3vax_A 389 LARGVAKLKPS 399 (400)
T ss_dssp -----------
T ss_pred HHHHHHHHhcc
Confidence 99999998764
No 167
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=95.47 E-value=0.035 Score=37.93 Aligned_cols=68 Identities=18% Similarity=0.053 Sum_probs=47.5
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+...+|.+..-. ...+....+...+.++|+.+++.-.....+|++.-...|++|+|.+++.|++.+++
T Consensus 307 ~~ivsf~~~~~~-~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 307 KMNIPFRIGNAK-GDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp SSEEEEEESSTT-CCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCC-CchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 344666654211 00123346777788999988764333467999999999999999999999998753
No 168
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=95.35 E-value=0.0041 Score=40.82 Aligned_cols=62 Identities=11% Similarity=0.145 Sum_probs=47.2
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeec-------CCCCCEEE-EecCcc-cCHHHHHHHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKG-------GFYGNVFR-IAPPLC-FTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-------g~~~~~i~-~~PPL~-i~~~eid~~~~~l~~~l~~ 81 (82)
.|.+..+++. ....+.+.+.++|+.+.+. +...+.+| +.++.. .|++|+++++++|++++++
T Consensus 299 ~~~~~~~~~~--------~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 299 NHDLMFFHAE--------VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp CSSEEEEECH--------HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEECC--------CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 4667777663 2456778888899988661 11257899 999988 9999999999999998863
No 169
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=95.25 E-value=0.049 Score=37.24 Aligned_cols=49 Identities=16% Similarity=-0.018 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 32 LDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 32 ~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..+...+.++|+.++..-.....+|++.-...|++|+|.+++.|++..+
T Consensus 335 ~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~~ 383 (386)
T 3qm2_A 335 KVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFER 383 (386)
T ss_dssp HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 4677778889998875422235699999999999999999999998765
No 170
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=95.16 E-value=0.034 Score=37.01 Aligned_cols=49 Identities=10% Similarity=0.194 Sum_probs=38.1
Q ss_pred HHHHHHHHHHcCceeeecCCC--CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQMGVLIGKGGFY--GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~--~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.++|+.+.++... .+.+|++-. .++++++++++++.+++++
T Consensus 334 ~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 334 EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERFARVLGR 384 (385)
T ss_dssp HHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGGC--
T ss_pred HHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHhh
Confidence 456788888999999875322 478999955 7999999999999988754
No 171
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=94.94 E-value=0.069 Score=36.18 Aligned_cols=49 Identities=12% Similarity=0.019 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 32 LDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 32 ~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..+...+.++|+.++..-.....+|+++-...|++|+|.+++.|++..+
T Consensus 310 ~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 310 PLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 3577788889998865422235699999999999999999999998765
No 172
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=94.93 E-value=0.036 Score=37.10 Aligned_cols=43 Identities=9% Similarity=0.119 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.+.++||++.++ ++.+|++++. .+++++ +++|.++++
T Consensus 366 ~~~~~~~l~~~gv~v~~g---~~~iRis~~~-~~~~~~---l~~l~~~l~ 408 (413)
T 3t18_A 366 AFDIVKDLEKENIFTIPS---AKGIRVAICG-VGEEKI---PKLVQRLAF 408 (413)
T ss_dssp HHHHHHHHHHTTEECEEC---SSEEEECTTT-SCGGGH---HHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEecC---CCceEEEEee-CCHHHH---HHHHHHHHH
Confidence 456777888999999985 6889999984 455554 666666553
No 173
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=94.85 E-value=0.062 Score=37.48 Aligned_cols=49 Identities=20% Similarity=0.323 Sum_probs=38.2
Q ss_pred HHHHHHHHcCceeeec---CCCCCEEEEec-CcccCHHHHHHHHHHHHHhHhc
Q 042283 33 DVMDKMKQMGVLIGKG---GFYGNVFRIAP-PLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~---g~~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~~ 81 (82)
.+.+.+.+.|.+.... ....+.+|+++ +...|++|++++++.|++++++
T Consensus 462 ~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 462 VLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 4677888899765321 11246899999 8999999999999999998764
No 174
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=94.73 E-value=0.013 Score=40.13 Aligned_cols=72 Identities=18% Similarity=0.334 Sum_probs=42.9
Q ss_pred eeecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecC-----------------------ccc
Q 042283 7 GDARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPP-----------------------LCF 63 (82)
Q Consensus 7 ~~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PP-----------------------L~i 63 (82)
++.||.|.|++|++........+.+.++++.+...++.+..++ ..++...|+ |.+
T Consensus 320 ~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~--~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsv 397 (414)
T 3ndn_A 320 RQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGD--AKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISV 397 (414)
T ss_dssp HHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSC--SSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEEC
T ss_pred HhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCC--CCceeeCccccccccCCHHHHHhcCCCCCeEEEEe
Confidence 3568999999999953200001345667777765554443322 233333332 235
Q ss_pred CHHHHHHHHHHHHHhHh
Q 042283 64 TKEDANYLVDVMDCSMT 80 (82)
Q Consensus 64 ~~~eid~~~~~l~~~l~ 80 (82)
..|+.+.+++.|+++|+
T Consensus 398 G~e~~~dli~dl~~al~ 414 (414)
T 3ndn_A 398 GLEDTDDLIADIDRALS 414 (414)
T ss_dssp CSSCHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHhhC
Confidence 66788999999998874
No 175
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=94.73 E-value=0.078 Score=39.24 Aligned_cols=49 Identities=14% Similarity=0.053 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 30 ETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+..+.+.+.++|+++..++ .+.++++..+-.|+++++.++++|.+..+
T Consensus 516 ~~~~l~~~L~e~GI~v~~~~--~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~ 564 (730)
T 1c4k_A 516 PATIVANYLRDHGIIPEKSD--LNSILFLMTPAETPAKMNNLITQLLQLQR 564 (730)
T ss_dssp CHHHHHHHHHHTTCCCSEEC--SSEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcEEEECC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 45678888999999998764 67899999999999999999999987653
No 176
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=94.72 E-value=0.093 Score=33.86 Aligned_cols=47 Identities=15% Similarity=0.235 Sum_probs=37.0
Q ss_pred HHHHHHHHHcCceeeecCC--CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 32 LDVMDKMKQMGVLIGKGGF--YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 32 ~~v~~~~~~~Gll~~~~g~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
..+.+.+.++|+++.++.. ..+.+|++.. +++|+++++++|++.+++
T Consensus 288 ~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~~~ 336 (337)
T 3p1t_A 288 ERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSDH 336 (337)
T ss_dssp HHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhhc
Confidence 3566778899999988542 2579999965 899999999999987653
No 177
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=94.70 E-value=0.067 Score=35.93 Aligned_cols=60 Identities=8% Similarity=0.079 Sum_probs=42.1
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCC---CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFY---GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~---~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.|++.-+++.+. ..+...+.++||.+.++... .+.+||+.. .+++++++++++|.+++++
T Consensus 324 ~g~~~~~~~~~~--------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 324 YPAFAWLGTKEE--------TDLVSELRRHKVMSRAGERCGSDKKHVRVSML--SREDVFNVFLERLANMKLI 386 (391)
T ss_dssp CCSEEEEEESSS--------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--SCHHHHHHHHHHHHSCC--
T ss_pred cceEEEecCCcH--------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 355666666421 13556677899999885322 568999977 3899999999999988764
No 178
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=94.67 E-value=0.12 Score=34.72 Aligned_cols=59 Identities=14% Similarity=0.069 Sum_probs=41.9
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHH-cCceeeecCC----CCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQ-MGVLIGKGGF----YGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~-~Gll~~~~g~----~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
.|.++-+++. +. ....+...+++ +||++.++.. ..+.+|++ +..+++++++++++|++-
T Consensus 361 ~~~~~~~~~~-~~-----~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~l~~~l~rl~~~ 424 (432)
T 3ei9_A 361 NAPYVWVHFP-NQ-----SSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS--AFGHRENILEACRRFKQL 424 (432)
T ss_dssp SSSEEEEECT-TS-----CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHH
T ss_pred cceEEEEECC-CC-----CHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE--ecCCHHHHHHHHHHHHHH
Confidence 4666666664 11 24456666665 5999987421 25789999 678999999999999875
No 179
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=94.62 E-value=0.095 Score=35.18 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=26.5
Q ss_pred CEEEEecCccc-CHHHHHHHHHHHHHhHhc
Q 042283 53 NVFRIAPPLCF-TKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 53 ~~i~~~PPL~i-~~~eid~~~~~l~~~l~~ 81 (82)
++||+.+...+ |++|++.++++|++++++
T Consensus 384 ~~lrl~~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 384 QSIVIHHAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp HEEEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence 48999999999 999999999999998754
No 180
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=94.61 E-value=0.089 Score=36.49 Aligned_cols=51 Identities=18% Similarity=0.250 Sum_probs=38.3
Q ss_pred HHHHHHHHHHcCcee-eecCCC--CCEEEEecC-cccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQMGVLI-GKGGFY--GNVFRIAPP-LCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~-~~~g~~--~~~i~~~PP-L~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.++|.+. .+.... .+.+|+++. ...|++|++++++.|++++++
T Consensus 447 ~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 447 APKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp HHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 456888899999643 322111 258999995 889999999999999988754
No 181
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=94.43 E-value=0.17 Score=33.54 Aligned_cols=66 Identities=6% Similarity=0.056 Sum_probs=43.7
Q ss_pred cccceEEEEEeeeCCCC-c-----hHHHHHHHHHH-HHcCceeeecCCC---------CCEEEEecCcccCHHHHHHHHH
Q 042283 10 RGWGFMLGVEFVTDSQL-R-----KAETLDVMDKM-KQMGVLIGKGGFY---------GNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~-~-----~~~~~~v~~~~-~~~Gll~~~~g~~---------~~~i~~~PPL~i~~~eid~~~~ 73 (82)
...|++..+++...... . ......++..+ .++||++.++... .+.+||+ +..++++++++++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis--~~~~~e~l~~~l~ 404 (410)
T 3e2y_A 327 PDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFC--FIKKDSTLDAAEE 404 (410)
T ss_dssp CSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEE--CCCCHHHHHHHHH
T ss_pred CCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEE--EcCCHHHHHHHHH
Confidence 45678888887542110 0 01123555544 5789999875422 4789999 5669999999999
Q ss_pred HHHH
Q 042283 74 VMDC 77 (82)
Q Consensus 74 ~l~~ 77 (82)
+|++
T Consensus 405 ~l~~ 408 (410)
T 3e2y_A 405 IFRA 408 (410)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9875
No 182
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=94.24 E-value=0.011 Score=40.23 Aligned_cols=63 Identities=14% Similarity=0.184 Sum_probs=38.6
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeec-------------------------CCCCCEEEEecCcccC
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKG-------------------------GFYGNVFRIAPPLCFT 64 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-------------------------g~~~~~i~~~PPL~i~ 64 (82)
||.|.|++|++..+ .+.+..+...+...++.++.+ |...+.||++ ++
T Consensus 334 ~~~g~ivsf~l~~~----~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS----~g 405 (421)
T 2ctz_A 334 GKPGAVLTFGLKGG----YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLS----VG 405 (421)
T ss_dssp TCCCSEEEEEETTH----HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEE----CC
T ss_pred CCCceEEEEEeCCC----HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEE----eC
Confidence 78999999999632 123444555443333322221 1113566665 45
Q ss_pred HHHHHHHHHHHHHhHh
Q 042283 65 KEDANYLVDVMDCSMT 80 (82)
Q Consensus 65 ~~eid~~~~~l~~~l~ 80 (82)
.+|+|++++.|+++|+
T Consensus 406 ~e~~~~li~~l~~al~ 421 (421)
T 2ctz_A 406 LEHVEDLKAELKEALA 421 (421)
T ss_dssp SSCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHhC
Confidence 6799999999999874
No 183
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=94.23 E-value=0.26 Score=33.19 Aligned_cols=59 Identities=10% Similarity=0.098 Sum_probs=42.0
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecC----------------------------CCCCEEEEecCc
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGG----------------------------FYGNVFRIAPPL 61 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g----------------------------~~~~~i~~~PPL 61 (82)
+|.|.+++|++ .+ ...+.+.+.+.|+.+ ... ...+.||++..+
T Consensus 325 ~~~~~iv~~~~-~~-------~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~ 395 (412)
T 2cb1_A 325 ASGGPILTLDL-GD-------LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGL 395 (412)
T ss_dssp SSSCSEEEEEC-SS-------HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCS
T ss_pred CCCceEEEEEe-CC-------HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 57899999999 42 224455566678876 320 015789999888
Q ss_pred ccCHHHHHHHHHHHHH
Q 042283 62 CFTKEDANYLVDVMDC 77 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~ 77 (82)
--++++++.+.++|++
T Consensus 396 ~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 396 EDPLDLLALFEEALEA 411 (412)
T ss_dssp SCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8888888888888764
No 184
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=94.23 E-value=0.047 Score=35.68 Aligned_cols=49 Identities=8% Similarity=-0.012 Sum_probs=37.8
Q ss_pred HHHHHHHHHHcCceeeecCC----CCCEEEE---ecCcccCHHHHHHHHHHHHHhH
Q 042283 31 TLDVMDKMKQMGVLIGKGGF----YGNVFRI---APPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~----~~~~i~~---~PPL~i~~~eid~~~~~l~~~l 79 (82)
...+.+.+.++|++++++.. ..+.+|+ .+.+..+.++++++++.|.+++
T Consensus 304 ~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~l 359 (359)
T 3pj0_A 304 GAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL 359 (359)
T ss_dssp HHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 56788899999999987521 1245676 4567789999999999998864
No 185
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=93.74 E-value=0.083 Score=35.46 Aligned_cols=29 Identities=14% Similarity=0.259 Sum_probs=26.7
Q ss_pred CCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 52 GNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 52 ~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.+|++++...|++|+++++++|+++++
T Consensus 398 ~~~iRis~~~~~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 398 RNAVRLSVGRSTTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp TTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 37999999999999999999999999875
No 186
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=93.63 E-value=0.039 Score=37.61 Aligned_cols=26 Identities=12% Similarity=0.218 Sum_probs=17.2
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHH
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMK 39 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~ 39 (82)
||.|+|++|++..+ .+.+.++.+.+.
T Consensus 310 ~g~G~~~~~~l~~~----~~~~~~~~~~l~ 335 (400)
T 3nmy_A 310 SGFGGIVSIVLKGG----FDAAKRFCEKTE 335 (400)
T ss_dssp SSCCSEEEEEETTH----HHHHHHHHHHCS
T ss_pred CCCCceEEEEeCCc----HHHHHHHHHcCC
Confidence 99999999999532 123445555543
No 187
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=93.60 E-value=0.2 Score=35.02 Aligned_cols=50 Identities=18% Similarity=0.223 Sum_probs=40.3
Q ss_pred HHHHHHHHHHcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.+.++|+++..+.. ....+|++.-...|++|++.+++.|+++++
T Consensus 388 ~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 388 EFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp HHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 34788899999998754321 235899999999999999999999999875
No 188
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=93.55 E-value=0.12 Score=35.91 Aligned_cols=50 Identities=8% Similarity=0.145 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCceee----ecC---CCCCEEEEecCcccC----HHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIG----KGG---FYGNVFRIAPPLCFT----KEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~----~~g---~~~~~i~~~PPL~i~----~~eid~~~~~l~~~l~ 80 (82)
...+.+.+.+.|+.+. +.. ...+.+||..|...| ++|++++++.|.+++.
T Consensus 369 ~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~ 429 (483)
T 1rv3_A 369 GGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIE 429 (483)
T ss_dssp HHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 4456677788999988 421 124689999997766 9999999999998875
No 189
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=93.47 E-value=0.22 Score=33.92 Aligned_cols=61 Identities=11% Similarity=-0.073 Sum_probs=43.8
Q ss_pred ceEEEEEeeeCCCCchHHHHHHHHHHH-HcCceeeecCC---CCCEEEEecCcccCHHHHHHHHHHHHHhHhcC
Q 042283 13 GFMLGVEFVTDSQLRKAETLDVMDKMK-QMGVLIGKGGF---YGNVFRIAPPLCFTKEDANYLVDVMDCSMTKK 82 (82)
Q Consensus 13 Glm~gie~~~~~~~~~~~~~~v~~~~~-~~Gll~~~~g~---~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~~ 82 (82)
|++.-+++..+ ...+++.++ ++||+++++.. ..+.+|++..- +++++++++++|.++++++
T Consensus 361 g~f~~~~~~~~-------~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~--~~e~l~~~l~~l~~~~~~~ 425 (427)
T 2hox_A 361 PSYAWVKCEWE-------EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK--TQDDFDQLMYYLKDMVKAK 425 (427)
T ss_dssp CSEEEEEECSG-------GGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS--CHHHHHHHHHHHHHHHTCC
T ss_pred ceEEEEECCCc-------HHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC--CHHHHHHHHHHHHHHHhhc
Confidence 66666777421 123555554 78999988532 25689999873 8999999999999998653
No 190
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=93.44 E-value=0.2 Score=33.72 Aligned_cols=64 Identities=17% Similarity=0.110 Sum_probs=42.5
Q ss_pred eEEEEEeeeCC-CCchHHHHHHHHHHHHcCceeeec-CCC---------------CC-------EEEEecCcccCHHHHH
Q 042283 14 FMLGVEFVTDS-QLRKAETLDVMDKMKQMGVLIGKG-GFY---------------GN-------VFRIAPPLCFTKEDAN 69 (82)
Q Consensus 14 lm~gie~~~~~-~~~~~~~~~v~~~~~~~Gll~~~~-g~~---------------~~-------~i~~~PPL~i~~~eid 69 (82)
.++.+++.... + .....+.+.+.++|+.+++. ... ++ .+++.....+|++|++
T Consensus 297 ~~~~i~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~ 373 (424)
T 2po3_A 297 QYVIVEIDEATTG---IHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIR 373 (424)
T ss_dssp CCEEEEECHHHHS---SCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHH
T ss_pred EEEEEEECCccch---hhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHH
Confidence 56667664200 0 02456788889999998762 100 01 2555555999999999
Q ss_pred HHHHHHHHhHh
Q 042283 70 YLVDVMDCSMT 80 (82)
Q Consensus 70 ~~~~~l~~~l~ 80 (82)
+++++|.++++
T Consensus 374 ~~~~~L~~~~~ 384 (424)
T 2po3_A 374 RVADLLRLCAT 384 (424)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998874
No 191
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=93.32 E-value=0.045 Score=36.21 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=32.4
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
.+...+.++|+++.++ +|+.++.+ |++++++++++|++++
T Consensus 357 ~~~~~l~~~gv~v~~~------~Ris~~~~-~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 357 QVLRLREEFGVYAVAS------GRVNVAGM-TPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHHHCEECCTT------CEEEGGGC-CTTTHHHHHHHHHHHC
T ss_pred HHHHHHHhcCeeecCC------ceEEEeec-CHHHHHHHHHHHHhcC
Confidence 4556677899998752 69999864 9999999999998864
No 192
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=92.95 E-value=0.17 Score=33.02 Aligned_cols=66 Identities=6% Similarity=-0.097 Sum_probs=43.7
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCC---CCCEEEEe---cCcccCHHHHHHHHHHHHHhHh
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGF---YGNVFRIA---PPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~---~~~~i~~~---PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.++-+++.... ......+.+.+.++|+++++... ....+|+. +.+..+++++++++++|.++++
T Consensus 286 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al~ 357 (357)
T 3lws_A 286 VSNMFHLHFDGQA---ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAFS 357 (357)
T ss_dssp SSSEEEEEEESCH---HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC-
T ss_pred cceEEEEEecCCh---HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhcC
Confidence 3555556664321 11256778889999999987521 12256664 3467899999999999998863
No 193
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=92.95 E-value=0.14 Score=33.69 Aligned_cols=50 Identities=10% Similarity=0.078 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCceeeecCC---C----------------------CCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKGGF---Y----------------------GNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~---~----------------------~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.+.++|+.+++... + ..++|+......|++|+|.+++++++...
T Consensus 292 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 292 RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 55788899999998874310 0 06899998899999999999999988754
No 194
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=92.93 E-value=0.067 Score=35.70 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=32.9
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.+...+.++|+++.++ +|+.... ++++|+++++++|++++++
T Consensus 369 ~~~~~l~~~gv~v~~~------~Ris~~~-~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 369 QVEYLINQKHIYLLPS------GRINMCG-LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp HHHHHHHTTCEECCTT------SEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEecCC------cEEEeee-CCHHHHHHHHHHHHHHHHh
Confidence 4455566899999763 5888773 5999999999999998863
No 195
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=92.91 E-value=0.48 Score=32.03 Aligned_cols=65 Identities=11% Similarity=0.043 Sum_probs=44.7
Q ss_pred ecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeec----------------------------CCCCCEEEEecC
Q 042283 9 ARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKG----------------------------GFYGNVFRIAPP 60 (82)
Q Consensus 9 vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~----------------------------g~~~~~i~~~PP 60 (82)
.+|.|-|+.+++... ...+.+.+.+.|++.+.. |...+.||++..
T Consensus 308 ~~~~g~~~~~~l~~~-------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg 380 (403)
T 3cog_A 308 CTGCTGMVTFYIKGT-------LQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVG 380 (403)
T ss_dssp CSCCCSEEEEEESSC-------HHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECC
T ss_pred CCCCceEEEEEecCC-------HHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeC
Confidence 457799999987421 123445556678765431 112578999999
Q ss_pred cccCHHHHHHHHHHHHHhHh
Q 042283 61 LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 61 L~i~~~eid~~~~~l~~~l~ 80 (82)
+--++++++.+.++|+++++
T Consensus 381 ~e~~~d~i~~l~~al~~~~~ 400 (403)
T 3cog_A 381 LEDEEDLLEDLDQALKAAHP 400 (403)
T ss_dssp SSCHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHhhc
Confidence 98888888888888877654
No 196
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=92.87 E-value=0.35 Score=34.30 Aligned_cols=47 Identities=6% Similarity=-0.024 Sum_probs=38.0
Q ss_pred HHHHHHHHcCceeeecCC---CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 33 DVMDKMKQMGVLIGKGGF---YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~---~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.+.+.++||.+.++.. ..+.+|++.. ..+++++++++++|+++++
T Consensus 471 ~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~ 520 (546)
T 2zy4_A 471 MLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMAD 520 (546)
T ss_dssp HHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHH
Confidence 466778899999998632 2468999987 5789999999999998875
No 197
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=92.74 E-value=0.37 Score=32.81 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=38.3
Q ss_pred HHHHHHHHHHcCceeeecC-----CCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKGG-----FYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g-----~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.+.++|++++.+. ...+.+|++.--..|++|+|.+++.|+++++
T Consensus 378 ~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 378 LYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp HHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 3578888999999765321 1244899998777789999999999998764
No 198
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=92.71 E-value=0.076 Score=35.15 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=32.2
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
.+...+.++|+++.++ +|++++ .++++|+++++++|+++
T Consensus 354 ~~~~~l~~~gi~v~~~------~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 354 QVKRIKEEFGIYMVGD------SRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp HHHHHHHHHCEECCTT------CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEecCC------CeEEee-cCCHhhHHHHHHHHHHc
Confidence 4666777899998753 589988 58999999999999876
No 199
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=92.23 E-value=0.41 Score=31.55 Aligned_cols=68 Identities=4% Similarity=0.052 Sum_probs=46.8
Q ss_pred ccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCC-------------------------------CCEEEEec
Q 042283 11 GWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFY-------------------------------GNVFRIAP 59 (82)
Q Consensus 11 g~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~-------------------------------~~~i~~~P 59 (82)
..|.+..+.+.... ......+.+.+.++|+.++.+... .+.|+|.-
T Consensus 288 ~~~~~~~~~~~~~~---~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 364 (388)
T 1b9h_A 288 NSHYMAMFRIPGLT---EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHH 364 (388)
T ss_dssp CCCSEEEEECTTCC---HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEG
T ss_pred cceEEEEEEeCCcC---cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecC
Confidence 34677777774210 123567888899999998764210 12467766
Q ss_pred Cccc-CHHHHHHHHHHHHHhHhc
Q 042283 60 PLCF-TKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 60 PL~i-~~~eid~~~~~l~~~l~~ 81 (82)
--.+ |++|+|.++++|.+++++
T Consensus 365 ~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 365 RVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhh
Confidence 6677 999999999999998763
No 200
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=92.05 E-value=0.12 Score=34.08 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=31.1
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
.+...+.++|+++.++ . |+... .++++++++++++|++++
T Consensus 358 ~~~~~l~~~gi~v~~g----~--Ris~~-~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 358 QVDRLREEFGVYLIAS----G--RMCVA-GLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HHHHHHHTTCEECCTT----C--EEEGG-GCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHhCCEEECCC----C--eEEEE-ecCHhhHHHHHHHHHhhC
Confidence 4566777899999874 2 77764 568888999999998864
No 201
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=91.36 E-value=0.93 Score=30.28 Aligned_cols=60 Identities=13% Similarity=0.168 Sum_probs=40.0
Q ss_pred cccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeec--C--------------------------CCCCEEEEecCc
Q 042283 10 RGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKG--G--------------------------FYGNVFRIAPPL 61 (82)
Q Consensus 10 Rg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~--g--------------------------~~~~~i~~~PPL 61 (82)
+|.|.|+++++.. ...+.+.+.+.|++.+.. | ...+.||++..+
T Consensus 301 ~g~g~~~~~~l~~--------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~ 372 (389)
T 3acz_A 301 TGYGSTFLFEMKS--------FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGI 372 (389)
T ss_dssp SSCCSEEEEEESS--------HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCS
T ss_pred CCCCeEEEEEECC--------HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEecc
Confidence 6789999999842 123445566778877652 1 114789988776
Q ss_pred ccCHHHHHHHHHHHHHhHhc
Q 042283 62 CFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~l~~ 81 (82)
- +.+++++.++++|++
T Consensus 373 ~----~~~~li~~l~~al~~ 388 (389)
T 3acz_A 373 E----NVDDIIADLKQALEL 388 (389)
T ss_dssp S----CHHHHHHHHHHHHTC
T ss_pred C----CHHHHHHHHHHHHhh
Confidence 5 667777777777653
No 202
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=91.34 E-value=0.53 Score=32.24 Aligned_cols=49 Identities=10% Similarity=0.125 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCce-eeec------------CCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 31 TLDVMDKMKQMGVL-IGKG------------GFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 31 ~~~v~~~~~~~Gll-~~~~------------g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
...+.+.+.++|+. ++.. ....+.+|++..+..|++|+|+++++|++++
T Consensus 394 ~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 394 PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 34677788888852 2221 1124689999999999999999999998765
No 203
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=91.31 E-value=0.18 Score=33.89 Aligned_cols=41 Identities=12% Similarity=0.286 Sum_probs=32.3
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+...+.++|+++.+.+ |+.+. .++++++++++++|+++++
T Consensus 380 ~~~~~l~~~gI~v~~~~------Ris~~-~~~~~~i~~~~~~l~~~l~ 420 (420)
T 4f4e_A 380 QVDRLREEFGIYAVSTG------RICVA-ALNTRNLDVVANAIAAVLK 420 (420)
T ss_dssp HHHHHHHHHCEECCTTS------EEEGG-GCCTTTHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCEEecCCC------eEEEe-cCCHHHHHHHHHHHHHHhC
Confidence 45667778999998742 77764 5688999999999999873
No 204
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=91.30 E-value=0.31 Score=32.97 Aligned_cols=51 Identities=14% Similarity=0.123 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCceeeecCC--------C------------------CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQMGVLIGKGGF--------Y------------------GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~--------~------------------~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.++|+.++.+.. . .+.|++.-...+|++|+|.++++|.+++..
T Consensus 359 ~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~~ 435 (437)
T 3bb8_A 359 RIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFGL 435 (437)
T ss_dssp HHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHcc
Confidence 45788889999999876421 0 114888777888999999999999988753
No 205
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=91.00 E-value=0.27 Score=34.24 Aligned_cols=44 Identities=9% Similarity=0.075 Sum_probs=34.4
Q ss_pred HHHHHHcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 35 MDKMKQMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 35 ~~~~~~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.+.++||++.++.. ..+.+|++.. .+++++++++++|.++++
T Consensus 444 ~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~ 492 (500)
T 3tcm_A 444 LRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHE 492 (500)
T ss_dssp HHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHH
Confidence 3556678999987532 2357999977 899999999999998875
No 206
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=90.67 E-value=0.61 Score=31.03 Aligned_cols=51 Identities=8% Similarity=0.018 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHcCceeeecCCC-------------C---------CEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 30 ETLDVMDKMKQMGVLIGKGGFY-------------G---------NVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~~~~g~~-------------~---------~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
....+.+.+.++|+.+++.... + +.+++....-.|++|+|.++++|++++.
T Consensus 313 ~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 313 KISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp HHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 3567888899999998864200 0 2233333444899999999999999875
No 207
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=90.12 E-value=0.2 Score=33.45 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=34.6
Q ss_pred HH-HHHHHcCceeeecCC---CCCEEEEecC-cccCHHHHHHHHHHHHHhHhc
Q 042283 34 VM-DKMKQMGVLIGKGGF---YGNVFRIAPP-LCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 34 v~-~~~~~~Gll~~~~g~---~~~~i~~~PP-L~i~~~eid~~~~~l~~~l~~ 81 (82)
++ ..+.++||++.++.. ..+.+||.++ ...++.+++++.+++++++++
T Consensus 318 ~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~ 370 (374)
T 2aeu_A 318 IGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKM 370 (374)
T ss_dssp HHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHH
Confidence 44 445578999987532 2458999986 456666799999999988753
No 208
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=90.09 E-value=0.82 Score=32.12 Aligned_cols=48 Identities=17% Similarity=0.186 Sum_probs=34.9
Q ss_pred HHHHH-HHHcCceeeecC---CCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 33 DVMDK-MKQMGVLIGKGG---FYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 33 ~v~~~-~~~~Gll~~~~g---~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.++.. +.++||.+.++. ...+.+|++-. .++++++++++++|.+++++
T Consensus 473 ~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a-~~~~e~i~~~i~~L~~~l~~ 524 (533)
T 3f6t_A 473 DFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA-NLPTEDYALIGKQVLELLKE 524 (533)
T ss_dssp HHHHHHHHHTTSSSCTTEEECSSTTEEEEESS-SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCcccCCCCCEEEEEEe-eCCHHHHHHHHHHHHHHHHH
Confidence 34444 457899987642 23578999853 26899999999999998753
No 209
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=89.38 E-value=0.73 Score=32.48 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=37.6
Q ss_pred HHHHHHHHHHcCceeeec-------CCCCCEEEEecC-c---ccCHHHHHHHHHHHHHhHh
Q 042283 31 TLDVMDKMKQMGVLIGKG-------GFYGNVFRIAPP-L---CFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~-------g~~~~~i~~~PP-L---~i~~~eid~~~~~l~~~l~ 80 (82)
+..+.+.+.+.|+.+... ...+..||+.-| + -++++|++++.+.+.+++.
T Consensus 379 ~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 379 GARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 456777888899998742 123578999544 3 3799999999999998875
No 210
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=89.04 E-value=0.46 Score=35.20 Aligned_cols=47 Identities=11% Similarity=0.014 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
+..+.+.+.++|+.+..++ .+.++++..+-.|+++++.++++|.+..
T Consensus 556 ~~~l~~~L~~~gI~~e~~~--~~~v~~~~~~g~t~~~~~~l~~al~~~~ 602 (755)
T 2vyc_A 556 AALVTAWLGRHGIVPTRTT--DFQIMFLFSMGVTRGKWGTLVNTLCSFK 602 (755)
T ss_dssp HHHHHHHHHTTTCCCSEEC--SSEEEEECCTTCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEeecC--CCeEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 4677788888999987764 6889999999889999999999988764
No 211
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=88.96 E-value=0.21 Score=33.31 Aligned_cols=41 Identities=12% Similarity=0.091 Sum_probs=32.5
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+...+.++|+++.+ .+|+.++. ++++++++++++|+++++
T Consensus 369 ~~~~~l~~~gi~v~~------~~Ris~~~-~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 369 MVKRLEETHAVYLVA------SGRASIAG-LNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp HHHHHHHHHCEECCT------TSEEEGGG-CCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEecc------CcEEEEcc-CCHhHHHHHHHHHHHHHH
Confidence 454455578999875 37999884 599999999999999875
No 212
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=88.80 E-value=0.89 Score=31.64 Aligned_cols=44 Identities=14% Similarity=0.098 Sum_probs=34.2
Q ss_pred HHHHHHcCceeeecCC-----CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 35 MDKMKQMGVLIGKGGF-----YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 35 ~~~~~~~Gll~~~~g~-----~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.+.++||.+.++.. ..+.+|+.- ..+++++++++++|.++++
T Consensus 443 ~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~--~~~~e~l~~~i~~L~~~~~ 491 (498)
T 3ihj_A 443 MKLLEETGICVVPGSGFGQREGTYHFRMTI--LPPVEKLKTVLQKVKDFHI 491 (498)
T ss_dssp HHHHHHHCBCCEEGGGTCCCTTCCBEEEEC--CSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEeCcccCCCCCCCEEEEEe--CCCHHHHHHHHHHHHHHHH
Confidence 4556678999987432 235899987 3799999999999998875
No 213
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=86.36 E-value=1.8 Score=29.85 Aligned_cols=51 Identities=16% Similarity=0.110 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCce-eeecC-CCCCEEEEecC-cccCHHHHHHHHHHHHHhHh
Q 042283 30 ETLDVMDKMKQMGVL-IGKGG-FYGNVFRIAPP-LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll-~~~~g-~~~~~i~~~PP-L~i~~~eid~~~~~l~~~l~ 80 (82)
....+.+.+.++|.+ +.+.. .....+|++.. ...|+++|++++++|+++++
T Consensus 423 ~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 476 (481)
T 4e1o_A 423 LTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAAT 476 (481)
T ss_dssp HHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 466788888888854 33321 12357999855 56799999999999998765
No 214
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=86.20 E-value=1.5 Score=30.24 Aligned_cols=51 Identities=12% Similarity=0.055 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHcCceeee-cC-CCCCEEEEecC-cccCHHHHHHHHHHHHHhHh
Q 042283 30 ETLDVMDKMKQMGVLIGK-GG-FYGNVFRIAPP-LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~~~-~g-~~~~~i~~~PP-L~i~~~eid~~~~~l~~~l~ 80 (82)
...++.+.+.++|.+... .. .....+|++.- ...|+++|+++++.|+++++
T Consensus 416 ~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 469 (475)
T 3k40_A 416 RNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAAD 469 (475)
T ss_dssp HHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 456788888888865422 11 12468999865 55799999999999998764
No 215
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=83.85 E-value=2.7 Score=28.77 Aligned_cols=51 Identities=6% Similarity=-0.091 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHcCceeeecC--CCCCEEEEec-CcccCHHHHHHHHHHHHHhHh
Q 042283 30 ETLDVMDKMKQMGVLIGKGG--FYGNVFRIAP-PLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~~~~g--~~~~~i~~~P-PL~i~~~eid~~~~~l~~~l~ 80 (82)
....+.+.+.++|.+....+ ...+.+|++- ....|+++++++++.|+++++
T Consensus 419 ~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 472 (486)
T 1js3_A 419 LNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAA 472 (486)
T ss_dssp HHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 35678888888886543221 1246899884 445689999999999988764
No 216
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=83.59 E-value=0.42 Score=32.92 Aligned_cols=20 Identities=15% Similarity=0.106 Sum_probs=15.7
Q ss_pred cccCHHHHHHHHHHHHHhHh
Q 042283 61 LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 61 L~i~~~eid~~~~~l~~~l~ 80 (82)
|.+.-|+.+.+++.|+++|+
T Consensus 411 lsvG~E~~~dl~~dl~~al~ 430 (430)
T 3ri6_A 411 LSVGIEEIEDLKEDILQALC 430 (430)
T ss_dssp EECCSSCHHHHHHHHHHHHC
T ss_pred EEeccCCHHHHHHHHHHhhC
Confidence 34666788999999998874
No 217
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=83.05 E-value=3.4 Score=28.83 Aligned_cols=49 Identities=18% Similarity=0.223 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCceeeec---CCCCCEEEEec-CcccCHHHHHHHHHHHHHhH
Q 042283 31 TLDVMDKMKQMGVLIGKG---GFYGNVFRIAP-PLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~---g~~~~~i~~~P-PL~i~~~eid~~~~~l~~~l 79 (82)
...+.+.+.++|.+.... +...+.+|+.. ....+++||+.+++.+++.-
T Consensus 450 ~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~ 502 (511)
T 3vp6_A 450 APKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLG 502 (511)
T ss_dssp HHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 446888899999654331 11124699998 67889999999999998764
No 218
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=82.99 E-value=0.8 Score=31.71 Aligned_cols=66 Identities=20% Similarity=0.152 Sum_probs=40.9
Q ss_pred eecccceEEEEEeeeCCCCchHHHHHHHHHHHHcCceeee-------------------------cCCCCCEEEEecCcc
Q 042283 8 DARGWGFMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGK-------------------------GGFYGNVFRIAPPLC 62 (82)
Q Consensus 8 ~vRg~Glm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~-------------------------~g~~~~~i~~~PPL~ 62 (82)
+.+|.|.|++|++..+ .+.+..+...+...++-+.. .|...+.|||+.-
T Consensus 354 ~~~g~g~ivsf~l~~~----~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG-- 427 (445)
T 1qgn_A 354 QMTGFGGAVSFEVDGD----LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG-- 427 (445)
T ss_dssp HCSCCCSEEEEEESSC----HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--
T ss_pred hccCCCcEEEEEECCC----HHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--
Confidence 4478899999999632 12344555554322221111 1122468888744
Q ss_pred cCHHHHHHHHHHHHHhHhc
Q 042283 63 FTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 63 i~~~eid~~~~~l~~~l~~ 81 (82)
.||+|.+++.|+++++.
T Consensus 428 --~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 428 --VEDFDDLKADILQALDS 444 (445)
T ss_dssp --SSCHHHHHHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHHHhh
Confidence 67899999999999863
No 219
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=80.76 E-value=2.9 Score=22.12 Aligned_cols=30 Identities=13% Similarity=0.252 Sum_probs=25.8
Q ss_pred CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 51 YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 51 ~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.++++.||-.+|.++-++-...++.+++
T Consensus 16 ~~KsL~Lf~P~gLt~~Q~~QW~~TIeav~q 45 (75)
T 2fqm_A 16 HGKTLRLTLPEGLSGEQKSQWMLTIKAVVQ 45 (75)
T ss_dssp TEEEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCccHHHHHHHHHHHHHHHh
Confidence 478999999999999999988888877653
No 220
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=78.61 E-value=2.2 Score=21.85 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=17.7
Q ss_pred EecCcccCHHHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~ 77 (82)
.+||+.+|++|++.+++-|..
T Consensus 58 ~Mp~~~Lsd~ei~~l~~yl~~ 78 (80)
T 1ayg_A 58 PMPPQNVTDAEAKQLAQWILS 78 (80)
T ss_dssp CBCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHh
Confidence 489999999999999887653
No 221
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=78.39 E-value=4.7 Score=27.68 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=29.9
Q ss_pred HHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 35 MDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 35 ~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++.+.++||++.+.| ||.-. .+++++|+.+.++|.+++++
T Consensus 377 v~~L~e~~Vy~~~~g------Ris~A-gl~~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 377 CEYCQNHNIFITVSG------RANMA-GLTHETALMLAQTINDAVRN 416 (420)
T ss_dssp HHHHHHTTEECCTTC------EEEGG-GCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHhCCEEEcCCC------EEEec-cCCHHHHHHHHHHHHHHHHH
Confidence 466788998876532 55533 47999999999999999864
No 222
>1cch_A Cytochrome C551; electron transport; HET: HEM; NMR {Pseudomonas stutzeri} SCOP: a.3.1.1 PDB: 1fi3_A* 2i8f_A* 1cor_A*
Probab=77.68 E-value=2.3 Score=21.69 Aligned_cols=21 Identities=29% Similarity=0.324 Sum_probs=17.9
Q ss_pred EecCcccCHHHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~ 77 (82)
.+||+.+|++|++.+++-|..
T Consensus 60 ~Mp~~~ls~~ei~~l~~yl~~ 80 (82)
T 1cch_A 60 PMPPNPVTEEEAKILAEWVLS 80 (82)
T ss_dssp CCCCCSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHh
Confidence 589999999999999887653
No 223
>2exv_A Cytochrome C-551; alpha helix, heme C, electron transport; HET: HEC; 1.86A {Pseudomonas aeruginosa} PDB: 2pac_A* 351c_A* 451c_A* 1dvv_A*
Probab=77.57 E-value=1.9 Score=22.10 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=17.2
Q ss_pred EecCcccCHHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVMD 76 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~ 76 (82)
.+||+.+|++|++.+++-|.
T Consensus 60 ~Mp~~~ls~~ei~~l~~yl~ 79 (82)
T 2exv_A 60 PMPPNAVSDDEAQTLAKWVL 79 (82)
T ss_dssp CBCCCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHH
Confidence 58999999999999887664
No 224
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=76.72 E-value=4.5 Score=27.03 Aligned_cols=28 Identities=11% Similarity=0.097 Sum_probs=24.1
Q ss_pred CCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 52 GNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 52 ~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
.+.|||+.-+--++++++.+.++|+++.
T Consensus 365 ~~~iRlS~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 365 DDLVRISVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 4799999999999999999999888753
No 225
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=76.31 E-value=2.5 Score=21.44 Aligned_cols=19 Identities=11% Similarity=0.366 Sum_probs=16.8
Q ss_pred cCHHHHHHHHHHHHHhHhc
Q 042283 63 FTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 63 i~~~eid~~~~~l~~~l~~ 81 (82)
.|+++.+.++.+|+++++.
T Consensus 5 lt~eq~~aILkaLdeaIe~ 23 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEK 23 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHc
Confidence 6899999999999999863
No 226
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=73.31 E-value=3.3 Score=27.40 Aligned_cols=40 Identities=8% Similarity=0.229 Sum_probs=28.5
Q ss_pred HHHHHH-HcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 34 VMDKMK-QMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 34 v~~~~~-~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
....++ ++|+.+.++ . |+... ..+++|+++++++|+++++
T Consensus 369 ~~~~ll~~~gv~v~p~----~--Ri~~~-~~~~~~i~~~~~~l~~~l~ 409 (409)
T 4eu1_A 369 QVELLRSEYHIYMTLN----G--RAAVS-GLNSTNVEYVSQAIHNVTK 409 (409)
T ss_dssp HHHHHHHHHCEECCTT----C--EEEGG-GCCTTTHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCEEEcCC----C--EEEEE-ecCHhhHHHHHHHHHHHhC
Confidence 344444 679998864 2 45443 5688889999999998863
No 227
>1gks_A Cytochrome C551; halophilic purple phototrophic bacterium, electron transport; HET: HEM; NMR {Halorhodospira halophila} SCOP: a.3.1.1
Probab=72.87 E-value=2.3 Score=21.84 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=17.3
Q ss_pred EecCc--ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL--CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~ 77 (82)
.+||+ .+|++|+..+++-+..
T Consensus 54 ~Mp~~~~~Lsd~ei~~l~~yi~~ 76 (78)
T 1gks_A 54 AMPAYDGRADREDLVKAIEYMLS 76 (78)
T ss_dssp TBCCCBTTBCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHh
Confidence 58887 6999999999887654
No 228
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=72.76 E-value=8.7 Score=25.17 Aligned_cols=45 Identities=13% Similarity=0.192 Sum_probs=34.1
Q ss_pred HHHHHHHHHHcCceeeec--CC---C-C---------------------CEEEEecCcccCHHHHHHHHHHH
Q 042283 31 TLDVMDKMKQMGVLIGKG--GF---Y-G---------------------NVFRIAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~--g~---~-~---------------------~~i~~~PPL~i~~~eid~~~~~l 75 (82)
...+.+.+.++|+.++.. ++ . + +.|+|.-....|++|+|.++++|
T Consensus 318 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 318 RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 456888888999988752 10 1 0 25888888899999999999876
No 229
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=71.96 E-value=3.8 Score=26.75 Aligned_cols=47 Identities=11% Similarity=0.045 Sum_probs=34.1
Q ss_pred HHHHHHHHHHcCceeeecCC----------------------CCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 31 TLDVMDKMKQMGVLIGKGGF----------------------YGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~----------------------~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
...+.+.+.++|+.++.... ..+.|++.----+|++|++.+++.+.+
T Consensus 291 ~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 291 RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 45788889999998875321 023566655667899999999998865
No 230
>1gdv_A Cytochrome C6; RED ALGA, electron transport; HET: HEM; 1.57A {Porphyra yezoensis} SCOP: a.3.1.1 PDB: 2zbo_A*
Probab=71.26 E-value=4.4 Score=20.58 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=18.3
Q ss_pred EecCc--ccCHHHHHHHHHHHHHh
Q 042283 57 IAPPL--CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~~ 78 (82)
.+||+ .+|++|++.+++-|...
T Consensus 57 ~Mp~~~~~ls~~ei~~l~~yl~~~ 80 (85)
T 1gdv_A 57 AMPAFGGRLVDEDIEDAANYVLSQ 80 (85)
T ss_dssp TBCCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 57888 79999999999877653
No 231
>3dr0_A Cytochrome C6; photosynthesis, cyanobacteria, electron transfer electron transport, heme, iron, metal-binding, thylakoid; HET: HEM; 1.23A {Synechococcus SP}
Probab=69.92 E-value=4.8 Score=20.70 Aligned_cols=22 Identities=9% Similarity=0.185 Sum_probs=18.4
Q ss_pred EecCc--ccCHHHHHHHHHHHHHh
Q 042283 57 IAPPL--CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~~ 78 (82)
.+||+ .+|++|++.++.-|...
T Consensus 64 ~Mp~~~~~ls~~ei~~l~~yl~~l 87 (93)
T 3dr0_A 64 AMPAFGGRLSDADIANVAAYIADQ 87 (93)
T ss_dssp TBCCCBTTBCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 68888 79999999999877653
No 232
>1a56_A C-551, ferricytochrome C-552; hemoprotein, prokaryotic electron transport; HET: HEC; NMR {Nitrosomonas europaea} SCOP: a.3.1.1 PDB: 1a8c_A*
Probab=69.77 E-value=3.3 Score=21.15 Aligned_cols=22 Identities=27% Similarity=0.255 Sum_probs=18.0
Q ss_pred EEecCc-ccCHHHHHHHHHHHHH
Q 042283 56 RIAPPL-CFTKEDANYLVDVMDC 77 (82)
Q Consensus 56 ~~~PPL-~i~~~eid~~~~~l~~ 77 (82)
..+||+ .+|++|++.+++-|..
T Consensus 57 ~~Mp~~~~Ls~~ei~~l~~yl~~ 79 (81)
T 1a56_A 57 IPMPPNVNVSDADAKALADWILT 79 (81)
T ss_dssp CCBCSCCSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHh
Confidence 468998 8999999999887653
No 233
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=69.56 E-value=4 Score=26.82 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=27.8
Q ss_pred HHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 34 VMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 34 v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+...+.++|+.+.++ +|+.-. .++++++++++++|.++++
T Consensus 362 ~~~ll~~~gi~v~~~------~Ris~~-~~~~~~i~~~~~~l~~~~~ 401 (401)
T 7aat_A 362 VERLTKEFSIYMTKD------GRISVA-GVASSNVGYLAHAIHQVTK 401 (401)
T ss_dssp HHHHHHHHCEECCTT------CEEEGG-GCCTTTHHHHHHHHHHHHC
T ss_pred HHHHHHhCCEeccCC------CeEEec-cCChhhHHHHHHHHHHHhC
Confidence 334446789988642 455554 3566779999999998863
No 234
>3ph2_B Cytochrome C6; photosynthesis, cytochrome F, photosys thylakoid; HET: HEM; 1.40A {Phormidium laminosum} SCOP: a.3.1.1 PDB: 2v08_A* 1c6s_A*
Probab=69.54 E-value=5.1 Score=20.39 Aligned_cols=21 Identities=10% Similarity=0.045 Sum_probs=17.7
Q ss_pred EecCc--ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL--CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~ 77 (82)
.+||+ .+|++|++.++.-|..
T Consensus 58 ~Mp~~~~~ls~~ei~~l~~yl~~ 80 (86)
T 3ph2_B 58 GMPAFKGRLTDDQIAAVAAYVLD 80 (86)
T ss_dssp TBCCCTTTSCHHHHHHHHHHHHH
T ss_pred CCCCcccCCCHHHHHHHHHHHHH
Confidence 68888 7999999999887754
No 235
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=69.13 E-value=4.4 Score=20.57 Aligned_cols=20 Identities=20% Similarity=0.220 Sum_probs=16.5
Q ss_pred EecCc-ccCHHHHHHHHHHHH
Q 042283 57 IAPPL-CFTKEDANYLVDVMD 76 (82)
Q Consensus 57 ~~PPL-~i~~~eid~~~~~l~ 76 (82)
.+||+ .+|++|++.+++-|.
T Consensus 56 ~Mp~~~~Ls~~ei~~l~~yl~ 76 (79)
T 2d0s_A 56 PMPPHPQVAEADIEKIVRWVL 76 (79)
T ss_dssp CBCCCTTSCHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHHH
Confidence 48888 899999999887654
No 236
>2zxy_A Cytochrome C552, cytochrome C555; heme protein, oxygen binding, transport protein; HET: HEC; 1.15A {Aquifex aeolicus}
Probab=67.64 E-value=3 Score=21.34 Aligned_cols=21 Identities=19% Similarity=0.281 Sum_probs=17.5
Q ss_pred EEecCc-----ccCHHHHHHHHHHHH
Q 042283 56 RIAPPL-----CFTKEDANYLVDVMD 76 (82)
Q Consensus 56 ~~~PPL-----~i~~~eid~~~~~l~ 76 (82)
..+||+ .+|++|++.+++-|.
T Consensus 59 ~~Mp~~~~~~~~ls~~ei~~l~~yl~ 84 (87)
T 2zxy_A 59 AIMKPQLTMLKGLSDAELKALADFIL 84 (87)
T ss_dssp HHHGGGGGGGGGCCHHHHHHHHHHHH
T ss_pred CCCCCccccccCCCHHHHHHHHHHHH
Confidence 368998 899999999987664
No 237
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=67.16 E-value=15 Score=27.24 Aligned_cols=46 Identities=15% Similarity=0.135 Sum_probs=37.5
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
+..+.+.+.++|+.+..+. .+.+.++-++-.|+++++.++++|.+.
T Consensus 511 g~~~~~~L~~~~I~~E~~d--~~~vl~l~s~g~~~~~~~~L~~aL~~~ 556 (715)
T 3n75_A 511 ASIVAKYLDEHGIVVEKTG--PYNLLFLFSIGIDKTKALSLLRALTDF 556 (715)
T ss_dssp HHHHHHHHHHTTCCCSEEE--TTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEecC--CCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5577788888999988764 677878888888999999999888753
No 238
>2zon_G Cytochrome C551; nitrite, electron transfer, denitrification, oxidoreductase/electron transport complex; HET: HEM; 1.70A {Achromobacter xylosoxidans}
Probab=66.77 E-value=5.5 Score=20.53 Aligned_cols=21 Identities=19% Similarity=0.108 Sum_probs=17.8
Q ss_pred EecCc---ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL---CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL---~i~~~eid~~~~~l~~ 77 (82)
.+||+ .+|++|++.+++-|..
T Consensus 61 ~Mp~~~~~~ls~~ei~~l~~yl~~ 84 (87)
T 2zon_G 61 AMPPRGGTAADEATLRAAVAYMMD 84 (87)
T ss_dssp TBCGGGGCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
Confidence 68998 7999999999887754
No 239
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=66.71 E-value=6.2 Score=26.23 Aligned_cols=51 Identities=12% Similarity=0.005 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCceeeecCC-----------------------CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 31 TLDVMDKMKQMGVLIGKGGF-----------------------YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~-----------------------~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.+.++|+.++..-. ..++|+|-----+|++|++.+++++.+++..
T Consensus 301 ~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 301 NKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp HHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 56788999999998764210 0124444444467999999999999888754
No 240
>3cu4_A Cytochrome C family protein; monoheme cytochrome, electron transport; HET: HEM; 1.30A {Geobacter sulfurreducens}
Probab=66.61 E-value=5.6 Score=20.39 Aligned_cols=21 Identities=14% Similarity=0.107 Sum_probs=17.4
Q ss_pred EecCc---ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL---CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL---~i~~~eid~~~~~l~~ 77 (82)
.+||+ .+|++|++.+++-|..
T Consensus 59 ~Mp~~~~~~ls~~ei~~l~~yi~~ 82 (85)
T 3cu4_A 59 GMPAFGEAMIPPADALKIGEYVVA 82 (85)
T ss_dssp TSCCCCTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
Confidence 38998 7999999999887654
No 241
>1c6r_A Cytochrome C6; electron transport protein, reduced state, photosynthesis; HET: HEM; 1.90A {Scenedesmus obliquus} SCOP: a.3.1.1 PDB: 1c6o_A* 1a2s_A* 1ced_A* 1ctj_A*
Probab=64.99 E-value=7 Score=20.05 Aligned_cols=22 Identities=5% Similarity=0.095 Sum_probs=18.2
Q ss_pred EecCc--ccCHHHHHHHHHHHHHh
Q 042283 57 IAPPL--CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~~ 78 (82)
.+||+ .+|++|+..+++-|...
T Consensus 60 ~Mp~~~~~ls~~ei~~l~~yl~~~ 83 (89)
T 1c6r_A 60 AMPAWSGTLDDDEIAAVAAYVYDQ 83 (89)
T ss_dssp TBCCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHH
Confidence 58888 69999999999877654
No 242
>1cyi_A Cytochrome C6, cytochrome C553; photosynthesis, electron transport protein (cytochrome); HET: HEM; 1.90A {Chlamydomonas reinhardtii} SCOP: a.3.1.1 PDB: 1cyj_A*
Probab=64.80 E-value=7.1 Score=20.13 Aligned_cols=22 Identities=9% Similarity=0.157 Sum_probs=18.2
Q ss_pred EecCc--ccCHHHHHHHHHHHHHh
Q 042283 57 IAPPL--CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~~ 78 (82)
.+||+ .+|++|+..+++-|...
T Consensus 59 ~Mp~~~~~ls~~ei~~l~~yl~~~ 82 (90)
T 1cyi_A 59 AMPAWADRLSEEEIQAVAEYVFKQ 82 (90)
T ss_dssp TBCCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCCcccccCCHHHHHHHHHHHHhc
Confidence 58887 69999999999877654
No 243
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=64.35 E-value=7.8 Score=26.22 Aligned_cols=41 Identities=20% Similarity=0.453 Sum_probs=29.7
Q ss_pred HHHHH-HHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 34 VMDKM-KQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 34 v~~~~-~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
++..+ .++|+.+.++. + ||+-. .++++++++++++|.++++
T Consensus 401 ~~~~ll~~~gV~v~~G~--g---Ris~a-~~~~~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 401 HVDYLKEKWSIYLVKAG--G---RMSMC-GLTESNCDYVAEAIHDAVT 442 (448)
T ss_dssp HHHHHHHHHCEEECSGG--G---EEEGG-GCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCCC--c---EEEEe-cCCHHHHHHHHHHHHHHHH
Confidence 34444 56899998732 2 66653 4588889999999999886
No 244
>1ls9_A Cytochrome C6; omega loop, antiparallel beta-sheet, protoporphyrin IX containing Fe, heme, HAEM, electron transport; HET: HEM; 1.30A {Cladophora glomerata} SCOP: a.3.1.1
Probab=63.92 E-value=7.5 Score=20.12 Aligned_cols=22 Identities=9% Similarity=0.149 Sum_probs=18.3
Q ss_pred EecCc--ccCHHHHHHHHHHHHHh
Q 042283 57 IAPPL--CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~~ 78 (82)
.+||+ .+|++|++.++.-|...
T Consensus 62 ~Mp~~~~~ls~~ei~~l~~yl~~~ 85 (91)
T 1ls9_A 62 AMPAWADRLDEDDIEAVSNYVYDQ 85 (91)
T ss_dssp TBCCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCcchhhhCCHHHHHHHHHHHHHh
Confidence 58888 69999999999877654
No 245
>2l4d_A SCO1/SENC family protein/cytochrome C; electron transfer, electron transport; HET: HEC; NMR {Pseudomonas putida}
Probab=63.87 E-value=6.7 Score=20.96 Aligned_cols=21 Identities=10% Similarity=0.282 Sum_probs=18.0
Q ss_pred EecCcccCHHHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~ 77 (82)
.+|++-+|++|+..+++-|..
T Consensus 75 ~Mp~~~Ls~~ei~~l~~yl~~ 95 (110)
T 2l4d_A 75 AMPNMRLGDAEVSALISYLEE 95 (110)
T ss_dssp CCCCCCCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHH
Confidence 688888999999999887764
No 246
>1f1f_A Cytochrome C6; heme, protein structure, cyanobacteria, photosynthesis, electron transport; HET: HEM; 2.70A {Arthrospira maxima} SCOP: a.3.1.1 PDB: 1kib_A*
Probab=63.83 E-value=7.6 Score=19.86 Aligned_cols=22 Identities=5% Similarity=-0.010 Sum_probs=18.2
Q ss_pred EecCcc--cCHHHHHHHHHHHHHh
Q 042283 57 IAPPLC--FTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL~--i~~~eid~~~~~l~~~ 78 (82)
.+||+- +|++|++.+++-|...
T Consensus 61 ~Mp~~~~~ls~~ei~~l~~yl~~~ 84 (89)
T 1f1f_A 61 AMPGFNGRLSPLQIEDVAAYVVDQ 84 (89)
T ss_dssp TBCCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCCccccCCCHHHHHHHHHHHHHH
Confidence 588886 9999999999877653
No 247
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=63.61 E-value=19 Score=20.85 Aligned_cols=45 Identities=13% Similarity=0.150 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
....++...+.+.|++...-|..|...--.||=-||-.|+-+.++
T Consensus 43 ~~l~kil~~L~~aGlv~s~rG~~GGy~Lar~p~~Itl~dV~~ave 87 (143)
T 3t8r_A 43 LYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDIIRLLE 87 (143)
T ss_dssp HHHHHHHHHHHHTTSEEECSSSSSEEEESSCGGGCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCEEEecCCCCCCeeecCCcccCCHHHHHHHhC
Confidence 456778888899999876655445555456676777665555443
No 248
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=63.14 E-value=19 Score=21.47 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHH
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLV 72 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~ 72 (82)
....++...+.+.|++...-|..|...--.||=-||=.||-+.+
T Consensus 59 ~~l~kil~~L~~aGlv~s~rG~~GGy~Lar~p~eItL~dVi~av 102 (159)
T 3lwf_A 59 HYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTL 102 (159)
T ss_dssp HHHHHHHHHHHHTTSEEEECSTTCEEEECSCTTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHCCeEEEecCCCCceEecCCHHHCCHHHHHHHH
Confidence 45567888888899988766655555555677777766665544
No 249
>1cc5_A Cytochrome C5; electron transport (heme protein); HET: HEM; 2.50A {Azotobacter vinelandii} SCOP: a.3.1.1
Probab=62.81 E-value=7.5 Score=20.22 Aligned_cols=20 Identities=15% Similarity=0.293 Sum_probs=16.1
Q ss_pred EecCc----ccCHHHHHHHHHHHH
Q 042283 57 IAPPL----CFTKEDANYLVDVMD 76 (82)
Q Consensus 57 ~~PPL----~i~~~eid~~~~~l~ 76 (82)
.+||+ .+|++|+..+++-+.
T Consensus 58 ~MP~~~~~~~Lsd~ei~~v~~yi~ 81 (83)
T 1cc5_A 58 AMPPKGTCADCSDDELKAAIGKMS 81 (83)
T ss_dssp TBCSSSSCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHH
Confidence 48997 699999998887553
No 250
>3dmi_A Cytochrome C6; electron transport, transit peptide; HET: HEM; 1.50A {Phaeodactylum tricornutum} SCOP: a.3.1.1
Probab=61.41 E-value=9 Score=19.52 Aligned_cols=22 Identities=14% Similarity=0.229 Sum_probs=18.0
Q ss_pred EecCcc--cCHHHHHHHHHHHHHh
Q 042283 57 IAPPLC--FTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL~--i~~~eid~~~~~l~~~ 78 (82)
.+||+. +|++|+..++.-|...
T Consensus 59 ~Mp~~~~~ls~~ei~~l~~yl~~~ 82 (88)
T 3dmi_A 59 AMPAFGGRLSDEEIANVAAYVLAS 82 (88)
T ss_dssp TBCCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHH
Confidence 588886 9999999998877653
No 251
>2k6x_A Sigma-A, RNA polymerase sigma factor RPOD; DNA-binding, transcription, transcription regulation; NMR {Thermotoga maritima}
Probab=60.37 E-value=2.7 Score=21.94 Aligned_cols=42 Identities=12% Similarity=0.165 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcc--cCHHHHHHHHHHHHH
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLC--FTKEDANYLVDVMDC 77 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~--i~~~eid~~~~~l~~ 77 (82)
...+++...++|.+.. ......+|+-. ++.++++.+++.|.+
T Consensus 11 ~k~Li~~gK~~G~lTy-----~EI~d~l~~~~~~ld~e~id~i~~~L~~ 54 (72)
T 2k6x_A 11 IKKLISLGKKKGYITY-----EDIDKAFPPDFEGFDTNLIERIHEELEK 54 (72)
T ss_dssp HHHHHHHHHHHSSCBH-----HHHHHHCSCSCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHcCCccH-----HHHHHhCccccccCCHHHHHHHHHHHHH
Confidence 4557777788897663 23444677766 899999999998875
No 252
>1dlw_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.54A {Paramecium caudatum} SCOP: a.1.1.1 PDB: 1uvy_A*
Probab=58.88 E-value=8.9 Score=21.24 Aligned_cols=25 Identities=4% Similarity=0.175 Sum_probs=21.4
Q ss_pred EecCcccCHHHHHHHHHHHHHhHhc
Q 042283 57 IAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
-.=|+.|++++.+..++.+.+++++
T Consensus 67 ~H~~~~I~~~~f~~wl~~~~~al~~ 91 (116)
T 1dlw_A 67 VHANMGVSNAQFTTVIGHLRSALTG 91 (116)
T ss_dssp HHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCcCHHHHHHHHHHHHHHHHH
Confidence 4556889999999999999999864
No 253
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=58.80 E-value=22 Score=19.88 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHH
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLV 72 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~ 72 (82)
....++...+.+.|++....|..+....-.||--||-.|+-+.+
T Consensus 41 ~~v~~il~~L~~~Glv~~~~g~~ggy~L~~~~~~itl~di~~~~ 84 (129)
T 2y75_A 41 HYLEQLVSPLRNAGLVKSIRGAYGGYVLGSEPDAITAGDIIRVL 84 (129)
T ss_dssp HHHHHHHHHHHHTTSEEEC----CCEEESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHHHCCceEecCCCCCceEeCCCHHHCcHHHHHHHH
Confidence 45677888999999977654433444444566677755544433
No 254
>1kx2_A Mono-heme C-type cytochrome SCYA; HAEM protein, ferrocytochrome, electron transport, GRAM negative, bacteria; HET: HEC; NMR {Shewanella putrefaciens} SCOP: a.3.1.1 PDB: 1kx7_A*
Probab=58.27 E-value=7.2 Score=20.01 Aligned_cols=20 Identities=30% Similarity=0.376 Sum_probs=16.1
Q ss_pred EecCc----ccCHHHHHHHHHHHH
Q 042283 57 IAPPL----CFTKEDANYLVDVMD 76 (82)
Q Consensus 57 ~~PPL----~i~~~eid~~~~~l~ 76 (82)
.+||+ .+|++|++.+++-+.
T Consensus 55 ~Mp~~~~~~~Lsd~ei~~l~~Yi~ 78 (81)
T 1kx2_A 55 AMPPGGMCTDCTDEDYKAAIEFMS 78 (81)
T ss_dssp TSCGGGGCSSCCHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHH
Confidence 58887 789999998887553
No 255
>1c75_A Cytochrome C-553; heme, bacillus pasteurii, AB initio, ATOM resolution, electron transport; HET: HEM; 0.97A {Sporosarcina pasteurii} SCOP: a.3.1.1 PDB: 1b7v_A* 1k3g_A* 1k3h_A* 1n9c_A*
Probab=57.38 E-value=9.2 Score=18.90 Aligned_cols=20 Identities=10% Similarity=-0.042 Sum_probs=16.3
Q ss_pred EecCcccCHHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVMD 76 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~ 76 (82)
.+||-.+|++|++.+++-|.
T Consensus 49 ~Mp~~~ls~~ei~~l~~yl~ 68 (71)
T 1c75_A 49 GMPGGIAKGAEAEAVAAWLA 68 (71)
T ss_dssp TBCSCSSCHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHH
Confidence 37887899999999887664
No 256
>1wve_C 4-cresol dehydrogenase [hydroxylating] cytochrome C subunit; flavocytochrome, electron-transfer, FAD, heme, oxidoreductase; HET: FAD HEM; 1.85A {Pseudomonas putida} SCOP: a.3.1.1 PDB: 1diq_C* 1dii_C*
Probab=56.54 E-value=12 Score=19.00 Aligned_cols=21 Identities=10% Similarity=0.273 Sum_probs=17.1
Q ss_pred EecCc---ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL---CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL---~i~~~eid~~~~~l~~ 77 (82)
.+|++ .+|++|++.+++-|..
T Consensus 49 ~Mp~~~~~~ls~~ei~~l~~yl~~ 72 (80)
T 1wve_C 49 AMPAFPASYVDDESLTQVAEYLSS 72 (80)
T ss_dssp TBCCCCTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCcccCCCHHHHHHHHHHHHH
Confidence 48887 5899999999887754
No 257
>2bmm_A Thermostable hemoglobin from thermobifida fusca; bacterial hemoglobin, thermostable protein, oxygen storage/transport; HET: HEM; 2.48A {Thermobifida fusca}
Probab=56.21 E-value=10 Score=21.19 Aligned_cols=25 Identities=12% Similarity=0.146 Sum_probs=21.0
Q ss_pred EecCcccCHHHHHHHHHHHHHhHhc
Q 042283 57 IAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
-.-|+.|++++.+..++.+.+++++
T Consensus 72 ~H~~~~I~~~~f~~wl~~~~~al~e 96 (123)
T 2bmm_A 72 RHFPYRIGAEERDRWLTHMRAAVDD 96 (123)
T ss_dssp HTTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3446899999999999999998864
No 258
>3aq9_A Group 1 truncated hemoglobin; 2/2 fold hemoglobin, nitric oxide detoxification, oxygen BIN; HET: HEM; 1.74A {Tetrahymena pyriformis} PDB: 3aq5_A* 3aq6_A* 3aq8_A* 3aq7_A*
Probab=55.96 E-value=11 Score=21.12 Aligned_cols=30 Identities=3% Similarity=0.196 Sum_probs=23.3
Q ss_pred CCEE-EEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 52 GNVF-RIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 52 ~~~i-~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++.+ .-.=|+.|++++.+..++.+.+++++
T Consensus 66 g~~m~~~H~~~~I~~~~f~~wl~~~~~al~~ 96 (121)
T 3aq9_A 66 GKNMTEAHKGMNLQNLHFDAIIENLAATLKE 96 (121)
T ss_dssp SCCHHHHTTTSCBCHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHhcCCCcCHHHHHHHHHHHHHHHHH
Confidence 3434 34456889999999999999999864
No 259
>3oq2_A Crispr-associated protein CAS2; ferredoxin fold, immune system; HET: TRS CIT; 1.35A {Desulfovibrio vulgaris}
Probab=55.81 E-value=24 Score=19.52 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
....++.+.|.+.|..+. .++. .. .+|++++.++...|.+.++
T Consensus 25 kr~~kv~k~l~~yG~rvQ-----~SVF-e~---~lt~~~~~~L~~~L~~~id 67 (103)
T 3oq2_A 25 RRLRRIAKACQDYGQRVQ-----YSVF-EC---VVDPAQWAKLKHRLLSEMD 67 (103)
T ss_dssp HHHHHHHHHHGGGEEEEE-----TTEE-EE---EECHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhCccce-----EEEE-EE---EcCHHHHHHHHHHHHHhcC
Confidence 466789999999995554 2343 33 3699999999999998874
No 260
>1uw4_A UPF3X; nonsense mediated mRNA decay protein, RNA-binding protein, N domain, MIF4G domain; 1.95A {Homo sapiens} SCOP: d.58.7.4
Probab=55.62 E-value=13 Score=20.33 Aligned_cols=19 Identities=37% Similarity=0.527 Sum_probs=13.9
Q ss_pred EEEEecCcccCHHHHHHHHH
Q 042283 54 VFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 54 ~i~~~PPL~i~~~eid~~~~ 73 (82)
+||-+|| .+|++|+.+.++
T Consensus 5 VIRrLPP-~LteeeF~~~l~ 23 (91)
T 1uw4_A 5 VIRRLPP-TLTKEQLQEHLQ 23 (91)
T ss_dssp EEEEECT-TCCHHHHHHHHC
T ss_pred EEeCCCC-CCCHHHHHHHhc
Confidence 6888888 568888776653
No 261
>2h36_X ORF14, hypothetical protein SIFV0014; archaea, virus, unknown function; 2.95A {Sulfolobus islandicus filamentous viruorganism_taxid}
Probab=55.62 E-value=3.3 Score=23.87 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=26.9
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
...++...++.. +-. =.++|.+|+.+|++|..+++.
T Consensus 23 Lk~ild~FFed~-i~E------l~L~Fk~~leitE~ef~ELi~ 58 (112)
T 2h36_X 23 LDDALDFLFMEK-VSE------FKIKFKDPLKVTEEEYRELLG 58 (112)
T ss_dssp HHHHHHHHTSTT-CCE------EEEEEEEEEEEEHHHHHHTTC
T ss_pred HHHHHHHHHHHH-HHH------hheecCCceEecHHHHHHHHc
Confidence 456777777773 222 358999999999999988763
No 262
>1f1c_A Cytochrome C549; dimeric cytochrome, electron transport; HET: HEM; 2.30A {Arthrospira maxima} SCOP: a.3.1.1
Probab=54.18 E-value=10 Score=20.88 Aligned_cols=21 Identities=14% Similarity=0.235 Sum_probs=17.7
Q ss_pred EecCc-ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL-CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL-~i~~~eid~~~~~l~~ 77 (82)
.+|++ .+|++|+..+++-|..
T Consensus 98 ~Mp~~~~Ls~~ei~~l~~Yl~~ 119 (129)
T 1f1c_A 98 IFPKMRNISEDDLYNVAGYILL 119 (129)
T ss_dssp TCGGGSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHH
Confidence 58888 8999999999887654
No 263
>1g2c_B Fusion protein (F); membrane fusion, pneumovirus, HRSV, viral protein; 2.30A {Human respiratory syncytial virus} SCOP: h.3.2.1
Probab=53.50 E-value=17 Score=17.19 Aligned_cols=22 Identities=14% Similarity=0.382 Sum_probs=16.2
Q ss_pred cCcccCHHHHHHHHHHHHHhHh
Q 042283 59 PPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 59 PPL~i~~~eid~~~~~l~~~l~ 80 (82)
-||.+.+++.+..++-+.+.++
T Consensus 3 dPl~FP~DqFdvai~qV~esI~ 24 (43)
T 1g2c_B 3 DPLVFPSDEFDASISQVNEKIN 24 (43)
T ss_dssp -CCCCCHHHHHHHHHHHHHHHH
T ss_pred CcccCchHHHHHHHHHHHHHHH
Confidence 4899999998888776665543
No 264
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=53.39 E-value=23 Score=20.40 Aligned_cols=44 Identities=11% Similarity=0.115 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
....++...+.+.|++...-| .|...--.||=-||=.||-+.++
T Consensus 38 ~~l~kIl~~L~~aGlv~s~rG-~GGy~Lar~p~~Itl~dVi~ave 81 (145)
T 1xd7_A 38 VVVRRMISLLKKADILTSRAG-VPGASLKKDPADISLLEVYRAVQ 81 (145)
T ss_dssp HHHHHHHHHHHHTTSEECCSS-SSSCEESSCGGGCBHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCceEeecC-CCCceecCCHHHCCHHHHHHHHc
Confidence 456677888888888776656 55555566777777665555443
No 265
>2xyk_A 2-ON-2 hemoglobin; oxygen storage-transport complex; HET: HEM; 2.10A {Agrobacterium tumefaciens}
Probab=52.69 E-value=13 Score=21.44 Aligned_cols=26 Identities=8% Similarity=-0.058 Sum_probs=21.5
Q ss_pred EEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 56 RIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 56 ~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.-.=|+.|++++.|..++.+.+++++
T Consensus 78 ~~H~~~~I~~~~fd~Wl~~~~~al~e 103 (133)
T 2xyk_A 78 RRHFVAPIGPAERDEWLLCFRRAMDE 103 (133)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCcCHHHHHHHHHHHHHHHHH
Confidence 34456889999999999999998864
No 266
>3a9f_A Cytochrome C; alpha helix, mono heme, electron transport; HET: HEC P33 PGE PG4; 1.30A {Chlorobaculum tepidum}
Probab=52.08 E-value=14 Score=20.21 Aligned_cols=23 Identities=13% Similarity=0.049 Sum_probs=19.0
Q ss_pred EEEecCcccCHHHHHHHHHHHHH
Q 042283 55 FRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 55 i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
+.-+|+..||++|...+++-|.+
T Consensus 68 M~~mpg~~Is~eda~~Iv~YLa~ 90 (92)
T 3a9f_A 68 MQGFPGSGISDDDAKTIGIWLHE 90 (92)
T ss_dssp HHHSTTCCCCHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCHHHHHHHHHHHHH
Confidence 34568999999999999987764
No 267
>1ux8_A YJBI protein; oxygen storage/transport, truncated hemoglobin, oxygen transport; HET: HEM; 2.15A {Bacillus subtilis} SCOP: a.1.1.1
Probab=51.76 E-value=13 Score=21.17 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=20.5
Q ss_pred ecCcccCHHHHHHHHHHHHHhHhc
Q 042283 58 APPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 58 ~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.=|+.|++++.+..++.+.++|++
T Consensus 76 H~~~~I~~~~fd~wl~~~~~al~e 99 (132)
T 1ux8_A 76 HLPFPITNERADAWLSCMKDAMDH 99 (132)
T ss_dssp HTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHH
Confidence 346789999999999999998864
No 268
>2bkm_A Truncated hemoglobin from geobacillus stearothermophilus; hypothetical protein, oxygen transport, transport, oxygen storage; HET: HEM; 1.5A {Geobacillus stearothermophilus}
Probab=51.71 E-value=13 Score=20.93 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.5
Q ss_pred ecCcccCHHHHHHHHHHHHHhHhc
Q 042283 58 APPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 58 ~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.=|+.|++++.+..++.+.+++++
T Consensus 75 H~~~~I~~~~fd~wl~~~~~al~e 98 (128)
T 2bkm_A 75 HLRFEITPKRAEAWLACMRAAMDE 98 (128)
T ss_dssp HTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHH
Confidence 336789999999999999999864
No 269
>1vgj_A Hypothetical protein PH0099; alpha+beta, LIGT-like, structural genomics, ligase; 1.94A {Pyrococcus horikoshii} PDB: 1vdx_A 2fyh_A
Probab=51.66 E-value=34 Score=19.99 Aligned_cols=64 Identities=8% Similarity=-0.016 Sum_probs=35.9
Q ss_pred eEEEEEeeeCCCCchHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 14 FMLGVEFVTDSQLRKAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 14 lm~gie~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+++|+.+.++- .+....+.+.+.+.+.-.+......=+|.+..+--+++++++++.+.++++++
T Consensus 3 ~Fial~~p~~~---~~~l~~~~~~l~~~~~~~~~v~~~~lHiTL~flg~~~~~~~~~l~~~l~~~~~ 66 (184)
T 1vgj_A 3 AFIAIDVNESV---RDSLVRAQDYIGSKEAKIKFVERENLHITLKFLGEITEEQAEEIKNILKKIAE 66 (184)
T ss_dssp EEEEEECCHHH---HHHHHHHHHHHCSSSEEEEECCGGGCEEEEEEEESCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCHHH---HHHHHHHHHHHhhcCCCcEecCccccEEEEEeecCCCHHHHHHHHHHHHHHHc
Confidence 56777664310 12233344444443322332211223677766667899999999999988753
No 270
>2gkm_A TRHBN, hemoglobin-like protein HBN, flavohemoglobin; truncated hemoglobin, mutant, oxygen storage/transport complex; HET: HEM; 1.73A {Mycobacterium tuberculosis} PDB: 1idr_A* 1rte_A* 1s56_A* 1s61_A* 2gl3_A* 2gln_A* 2gkn_A*
Probab=51.40 E-value=14 Score=21.26 Aligned_cols=31 Identities=10% Similarity=0.097 Sum_probs=24.0
Q ss_pred CCCEE-EEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 51 YGNVF-RIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 51 ~~~~i-~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.++.+ .-.=|+.|++++.+..++.+.+++++
T Consensus 73 ~g~~m~~~H~~~~I~~~~fd~wl~~l~~al~e 104 (136)
T 2gkm_A 73 TGAPMKQVHQGRGITMHHFSLVAGHLADALTA 104 (136)
T ss_dssp CSCCHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 34444 24557899999999999999999864
No 271
>3o0r_C Nitric oxide reductase subunit C; oxidoreductase, electron transport, heme, iron, membrane, CY membrane; HET: HEM HEC; 2.70A {Pseudomonas aeruginosa}
Probab=50.84 E-value=15 Score=20.84 Aligned_cols=21 Identities=10% Similarity=0.320 Sum_probs=18.1
Q ss_pred EecCcccCHHHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~ 77 (82)
.+|++.+|++|++.+++-|..
T Consensus 111 ~Mp~~~Ls~~ei~~l~ayl~~ 131 (146)
T 3o0r_C 111 AMPQFHLSEGQVDDLAEFLKW 131 (146)
T ss_dssp CCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHH
Confidence 488888999999999988764
No 272
>1c52_A Cytochrome-C552; electron transport protein, MAD, thermostability; HET: HEM; 1.28A {Thermus thermophilus} SCOP: a.3.1.1 PDB: 1qyz_A* 1r0q_A* 2fwl_A* 1foc_A* 1dt1_A*
Probab=50.76 E-value=18 Score=20.26 Aligned_cols=23 Identities=4% Similarity=0.205 Sum_probs=19.3
Q ss_pred EEecCc-ccCHHHHHHHHHHHHHh
Q 042283 56 RIAPPL-CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 56 ~~~PPL-~i~~~eid~~~~~l~~~ 78 (82)
..||++ .+|++|+..+++-|...
T Consensus 67 ~~MP~~~~Lsd~ei~~l~~Yl~~~ 90 (131)
T 1c52_A 67 GVMSSFAQLKDEEIAAVLNHIATA 90 (131)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHT
T ss_pred CCCCCcccCCHHHHHHHHHHHHHH
Confidence 578998 79999999999887654
No 273
>3cp5_A Cytochrome C; electron transfer protein, electron transport; HET: HEC; 1.24A {Rhodothermus marinus}
Probab=50.61 E-value=15 Score=20.10 Aligned_cols=21 Identities=10% Similarity=0.327 Sum_probs=17.7
Q ss_pred EecCcccCHHHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~ 77 (82)
.+|+..+|++|+..+++-|..
T Consensus 99 ~Mp~~~Ls~~ei~~l~~Yl~~ 119 (124)
T 3cp5_A 99 MMTDMALSEEQARAILEYLRQ 119 (124)
T ss_dssp CCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
Confidence 578889999999998887754
No 274
>1c53_A Cytochrome C553; electron transport; HET: HEM; 1.80A {Desulfovibrio vulgaris str} SCOP: a.3.1.1 PDB: 1dvh_A* 1dwl_B* 1e08_E* 2dvh_A*
Probab=50.17 E-value=7.2 Score=19.78 Aligned_cols=21 Identities=19% Similarity=0.404 Sum_probs=17.0
Q ss_pred EEecCc--ccCHHHHHHHHHHHH
Q 042283 56 RIAPPL--CFTKEDANYLVDVMD 76 (82)
Q Consensus 56 ~~~PPL--~i~~~eid~~~~~l~ 76 (82)
..+||+ .+|++|++.+++-|.
T Consensus 55 ~~Mp~~~~~Ls~~ei~~l~~Yl~ 77 (79)
T 1c53_A 55 AVMTNLVKRYSDEEMKAMADYMS 77 (79)
T ss_pred cchHHHHhhCCHHHHHHHHHHHH
Confidence 368887 699999999887665
No 275
>3aq2_A 6B protein; miRNA machineries, toxin, ADP-ribosylation fold; 1.65A {Agrobacterium vitis} PDB: 3aq3_A
Probab=49.77 E-value=27 Score=21.90 Aligned_cols=42 Identities=14% Similarity=0.197 Sum_probs=33.2
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHH
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDV 74 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~ 74 (82)
.+.+.|..+-+|...++..+-...-.||+.+.-+++...++.
T Consensus 73 ~~A~~C~~~R~LpsNSsN~g~~aTalPPwL~~~~~LN~ilq~ 114 (207)
T 3aq2_A 73 VTAQLCGLNRLLPSNSPAFGTVATAMPPWLLDPQEMNAILQQ 114 (207)
T ss_dssp HHHHHHHHHTEEECCBTTTBEEEESSCTTSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCCcceeeeccCcccCCHHHHHHHHHh
Confidence 566788888888776655567888899999999888877754
No 276
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=49.55 E-value=23 Score=25.40 Aligned_cols=29 Identities=10% Similarity=0.265 Sum_probs=25.4
Q ss_pred CCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 52 GNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 52 ~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
-.-+...-.+-++++|+|.+++.|++++.
T Consensus 431 ~~yl~~a~aiG~~~~~v~~~~~~l~~~~~ 459 (501)
T 3hl2_A 431 CAYLNAASAIGMKMQDVDLFIKRLDRCLK 459 (501)
T ss_dssp SCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 35677888899999999999999999985
No 277
>2qrw_A Hemoglobin-like protein HBO; truncated hemoglobin fold, alpha helix, heme, hydroxylation, iron, membrane, metal-binding; HET: HEM; 1.93A {Mycobacterium tuberculosis} PDB: 1ngk_A*
Probab=49.24 E-value=18 Score=20.34 Aligned_cols=23 Identities=9% Similarity=0.215 Sum_probs=20.5
Q ss_pred EecCcccCHHHHHHHHHHHHHhH
Q 042283 57 IAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~~l 79 (82)
-.-|+.|++++.+..++.+.++|
T Consensus 74 ~H~~~~I~~~~f~~wl~~~~~al 96 (128)
T 2qrw_A 74 RHAPFRISLIERDAFLRCMHTAV 96 (128)
T ss_dssp HHTTSCCCHHHHHHHHHHHHHHH
T ss_pred hhcCCCcCHHHHHHHHHHHHHHH
Confidence 44578999999999999999999
No 278
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=48.16 E-value=18 Score=21.51 Aligned_cols=45 Identities=16% Similarity=0.065 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
....++...+.+.|++...-|..|...--.||=-||-.||-+.++
T Consensus 43 ~~l~kil~~L~~aGlv~s~rG~~GGy~Lar~p~~Itl~dIi~ave 87 (162)
T 3k69_A 43 VMIRNILSVLHKHGYLTGTVGKNGGYQLDLALADMNLGDLYDLTI 87 (162)
T ss_dssp GGTHHHHHHHHHTTSSEEECSTTCEEECCSCGGGSBHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCCEEeecCCCCCeEecCChhhCcHHHHHHHHc
Confidence 345688899999999876666545555556787888777766654
No 279
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=47.97 E-value=38 Score=19.53 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHH
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLV 72 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~ 72 (82)
....++...+.+.|++...-| .|...--.||=-||-.|+-+.+
T Consensus 45 ~~l~kil~~L~~~Glv~s~rG-~GGy~L~~~p~~Itl~dVi~a~ 87 (149)
T 1ylf_A 45 VVIRKIMSYLKQAGFVYVNRG-PGGAGLLKDLHEITLLDVYHAV 87 (149)
T ss_dssp HHHHHHHHHHHHTTSEEEC----CCEEESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHHHCCcEEEccC-CCceEeCCChhhCcHHHHHHHH
Confidence 345677788888888765545 4555555566666655554444
No 280
>2ce0_A Cytochrome C6; chloroplast, electron transport, heme, iron, thylakoid, photosynthesis, metal-binding, electron transfer; HET: HEC; 1.24A {Arabidopsis thaliana} PDB: 2ce1_A* 2dge_A* 2v07_A*
Probab=47.81 E-value=19 Score=18.93 Aligned_cols=17 Identities=12% Similarity=0.296 Sum_probs=14.3
Q ss_pred ccCHHHHHHHHHHHHHh
Q 042283 62 CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~ 78 (82)
.+|++|+..+++-|...
T Consensus 78 ~ls~~ei~~l~~yl~~~ 94 (105)
T 2ce0_A 78 RLQDEEIKLLAEFVKFQ 94 (105)
T ss_dssp CBCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 69999999999877653
No 281
>3u02_A Putative transcription-associated protein TFIIS; structural genomics, PSI-biology; HET: TPO MSE CIT MES; 2.40A {Pyrococcus furiosus dsm 3638}
Probab=47.40 E-value=37 Score=22.06 Aligned_cols=48 Identities=8% Similarity=0.169 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEec--Cc------------ccCHHHHHHHHHHHHHhHh
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAP--PL------------CFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~P--PL------------~i~~~eid~~~~~l~~~l~ 80 (82)
..+..+.+.+.+.|..+. ....+|+-| |+ -+.+++.+++++...+.+.
T Consensus 20 ~la~~i~~~L~~~g~~v~----~h~LvrLnP~iP~KTrgN~a~~l~~~v~~~~~~~l~~~a~~~v~ 81 (252)
T 3u02_A 20 YIGAILYREISKIAEPLD----FPRLIRLNPNVPYKTRGNGAVAMSFKIDEEKIKEVKTLVIRYVR 81 (252)
T ss_dssp HHHHHHHHHHTTTSEESS----SCEEEESCTTC-----CCEEEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccC----ceeEEEeCCCCCccCCCCcEEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 456677777777772111 245566666 44 2245777888877776654
No 282
>3dp5_A OMCF, cytochrome C family protein; C-type cytochrome, Fe SAD phasing, dissimilatory metal reduction, electron transport; HET: HEM; 1.86A {Geobacter sulfurreducens} SCOP: a.3.1.0
Probab=46.59 E-value=16 Score=19.45 Aligned_cols=22 Identities=18% Similarity=0.119 Sum_probs=17.9
Q ss_pred EecCcc---cCHHHHHHHHHHHHHh
Q 042283 57 IAPPLC---FTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL~---i~~~eid~~~~~l~~~ 78 (82)
.||++- +|++|+..++.-|.+.
T Consensus 73 ~MP~~~~~~Lsd~ei~~l~~Yi~~~ 97 (99)
T 3dp5_A 73 GMPAFGEAMIPPADALKIGEYVVAS 97 (99)
T ss_dssp TSCCCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 488884 8999999999877653
No 283
>1cno_A Cytochrome C552; electron transport, pseudomonas nautica, X RAY structure, multiwavelength anomalous dispersion, heme; HET: HEC; 2.20A {Marinobacter hydrocarbonoclasticus} SCOP: a.3.1.1
Probab=45.81 E-value=8.9 Score=19.75 Aligned_cols=21 Identities=10% Similarity=0.129 Sum_probs=17.2
Q ss_pred EecCc--ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL--CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~ 77 (82)
.+||+ .+|++|++.++.-|..
T Consensus 59 ~Mp~~~~~ls~~ei~~l~~yl~~ 81 (87)
T 1cno_A 59 VMQGQATALSDADIANLAAYYAS 81 (87)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHH
T ss_pred ccHHHHhhCCHHHHHHHHHHHHh
Confidence 57887 5999999999887754
No 284
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=45.40 E-value=36 Score=18.91 Aligned_cols=29 Identities=17% Similarity=0.214 Sum_probs=24.2
Q ss_pred CEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 53 NVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 53 ~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
-.+++.|||-.++.=++.+.+.+.+++.+
T Consensus 95 ~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 95 VTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp CEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 35778999999999899999999988853
No 285
>1w2l_A Cytochrome oxidase subunit II; cytochrome C domain, oxidoreductase; HET: HEM; 1.3A {Rhodothermus marinus}
Probab=43.95 E-value=19 Score=18.68 Aligned_cols=20 Identities=10% Similarity=0.444 Sum_probs=16.5
Q ss_pred EecCc--ccCHHHHHHHHHHHH
Q 042283 57 IAPPL--CFTKEDANYLVDVMD 76 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~ 76 (82)
.+||+ .+|++|+..++.-|.
T Consensus 75 ~Mp~~~~~ls~~ei~~l~~yl~ 96 (99)
T 1w2l_A 75 VMPASYASLSEREVAALIEFIK 96 (99)
T ss_dssp CCCGGGGGCCHHHHHHHHHHHH
T ss_pred cCccccccCCHHHHHHHHHHHH
Confidence 68887 499999999887664
No 286
>2zzs_A Cytochrome C554; C-type cytochrome, electron transport; HET: HEC; 1.80A {Vibrio parahaemolyticus}
Probab=43.23 E-value=10 Score=20.12 Aligned_cols=21 Identities=10% Similarity=0.183 Sum_probs=16.2
Q ss_pred EecCc--ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL--CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~ 77 (82)
.+||+ .+|++|++.+++-+..
T Consensus 79 ~Mp~~~~~ls~~ei~~l~~yl~~ 101 (103)
T 2zzs_A 79 VMQAQASLLSDDDIANLAAYYSS 101 (103)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHH
T ss_pred chHHHHhhCCHHHHHHHHHHHHh
Confidence 57777 6899999988876653
No 287
>1ow1_A Smart/HDAC1 associated repressor protein; beta-alpha-barrel, SPOC domain,, transcription; 1.80A {Homo sapiens} SCOP: b.131.1.3
Probab=41.90 E-value=32 Score=21.60 Aligned_cols=49 Identities=16% Similarity=0.231 Sum_probs=35.6
Q ss_pred HHHHHHHHH---cCceeeecC-C--CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 32 LDVMDKMKQ---MGVLIGKGG-F--YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 32 ~~v~~~~~~---~Gll~~~~g-~--~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..++..+.+ .|++..+.+ . ...+++++||--++.+.+.+..-.+.+.+.
T Consensus 128 ~~fV~YL~qKqAAGIisl~~~~s~~~~~vlhiFPPCeFs~~~L~~~AP~L~~~l~ 182 (195)
T 1ow1_A 128 AAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASIS 182 (195)
T ss_dssp HHTHHHHHHHTEEEEEEECCTTCCSCCEEEEEECSSHHHHHHHHHHCHHHHHHHT
T ss_pred HHHHHHHHhCccceEEecCCCCCCCcceEEEEcCCcHHHHHHHHHHChHHHhhhc
Confidence 345666664 488776532 1 246899999999999999998887766654
No 288
>3pm7_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.00A {Enterococcus faecalis}
Probab=41.72 E-value=15 Score=19.84 Aligned_cols=22 Identities=14% Similarity=0.218 Sum_probs=18.2
Q ss_pred cCcccCHHHHHHHHHHHHHhHh
Q 042283 59 PPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 59 PPL~i~~~eid~~~~~l~~~l~ 80 (82)
==+++|++|+..+.++|...|.
T Consensus 53 KGITLT~eE~~~Lk~~L~~~~~ 74 (80)
T 3pm7_A 53 KGITLTNEEFAELSKTIKSMLE 74 (80)
T ss_dssp EEEEECHHHHHHHHHHHHHTCC
T ss_pred CcceeCHHHHHHHHHHHHHHHH
Confidence 3378999999999999987664
No 289
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=41.38 E-value=17 Score=20.32 Aligned_cols=28 Identities=7% Similarity=-0.128 Sum_probs=22.8
Q ss_pred CEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 53 NVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 53 ~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
-.+++.|||-.++.-++.+.+.+.++++
T Consensus 100 ~~i~~~~pLg~~p~~~~~l~~ri~~a~~ 127 (133)
T 2xws_A 100 KKVVICEPIGEDYFVTYAILNSVFRIGR 127 (133)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHHCCC-
T ss_pred ceEEEcCCCCCCHHHHHHHHHHHHHhhc
Confidence 3577899999999999999988887764
No 290
>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli}
Probab=41.16 E-value=48 Score=19.80 Aligned_cols=43 Identities=12% Similarity=0.040 Sum_probs=26.4
Q ss_pred HHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 34 VMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 34 v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+.+.+.+.+++.|.+| ..-+.++| ..+.++.....+.+.+.+.
T Consensus 67 L~~~~~~~~~v~R~gG--DEF~ill~--~~~~~~~~~~~~~i~~~i~ 109 (179)
T 3tvk_A 67 LASWTRDYETVYRYGG--EEFIIIVK--AANDEEACRAGVRICQLVD 109 (179)
T ss_dssp HHHTSCTTSCEEECSS--SEEEEEEE--ESSHHHHHHHHHHHHHHHH
T ss_pred hHhcCCcccEEEEccC--CEEEEEcC--CCCHHHHHHHHHHHHHHHH
Confidence 3333445678888753 33444555 3578888877777776653
No 291
>2kjw_A TS9, 30S ribosomal protein S6; S6 permutant, solution structure, backbone dynamics, folding, ribonucleoprotein, RNA-binding, rRNA-binding; NMR {Thermus thermophilus}
Probab=40.61 E-value=45 Score=18.32 Aligned_cols=28 Identities=7% Similarity=0.190 Sum_probs=21.9
Q ss_pred CEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 53 NVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 53 ~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.++.+.-| .+++++++.+++.+.+.+.+
T Consensus 47 E~m~Il~P-~l~ee~~~~~ve~~~~iI~~ 74 (96)
T 2kjw_A 47 EVNIVLNP-NLDQSQLALEKEIIQRALEN 74 (96)
T ss_dssp EEEEECCS-SCCHHHHHHHHHHHHHHHHH
T ss_pred heeeeeCC-CCCHHHHHHHHHHHHHHHHh
Confidence 45555555 68999999999999988753
No 292
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=40.06 E-value=51 Score=18.71 Aligned_cols=37 Identities=24% Similarity=0.279 Sum_probs=24.7
Q ss_pred HcCceeeecCCCCCEE-EEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 40 QMGVLIGKGGFYGNVF-RIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 40 ~~Gll~~~~g~~~~~i-~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
+..++.+.. ++.+ .++|. .+.+++..+++.+.+.+..
T Consensus 79 ~~~~~~R~~---~d~F~ill~~--~~~~~~~~~~~~i~~~~~~ 116 (177)
T 3ign_A 79 QSDSAGRYG---GEEFGIILPE--TDAESARVICERIREAIEK 116 (177)
T ss_dssp TTSEEEECS---SSEEEEEEET--CCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEec---CCeEEEEeCC--CCHHHHHHHHHHHHHHHHh
Confidence 345666664 4554 45554 5888899888888887753
No 293
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=39.47 E-value=25 Score=22.35 Aligned_cols=28 Identities=18% Similarity=0.263 Sum_probs=23.8
Q ss_pred CEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 53 NVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 53 ~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..+++.+||-.+.++++.+.+++.+.+.
T Consensus 105 ~~i~~~~pl~~~~~~~~~l~~~l~~~~~ 132 (264)
T 2xwp_A 105 TRLTLGVPLLSSHNDYVQLMQALRQQMP 132 (264)
T ss_dssp SEEEEECCSSCSHHHHHHHHHHHHTTSC
T ss_pred CceEEecCCCCCHHHHHHHHHHHHHhcc
Confidence 3788999999999999999998877653
No 294
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=38.52 E-value=24 Score=23.80 Aligned_cols=39 Identities=26% Similarity=0.459 Sum_probs=28.0
Q ss_pred HHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 36 DKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 36 ~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
..+.++||.+.+.+ ||+-. .++++++++++++|.++++.
T Consensus 366 ~~L~~~gV~v~p~~------Ris~a-~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 366 EHLKTHHIYIINNG------RINVS-GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp TTTTTTTEECCTTS------EEEGG-GCCTTHHHHHHHHHHHHHHC
T ss_pred HHHHHCCEeecCCC------eEEEe-ccCHHHHHHHHHHHHHHHhh
Confidence 33467888887642 55421 36789999999999999864
No 295
>1wih_A Mitochondrial ribosome recycling factor; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.67.3.1
Probab=38.33 E-value=41 Score=18.14 Aligned_cols=33 Identities=15% Similarity=0.335 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHcCceeeecCCCCCEEEE-ecCccc
Q 042283 30 ETLDVMDKMKQMGVLIGKGGFYGNVFRI-APPLCF 63 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~~~~g~~~~~i~~-~PPL~i 63 (82)
....+.++.++.++=+.|. ..+++||+ .|||+-
T Consensus 46 ~~~~IekAI~~S~LglnP~-~dG~~Iri~iP~lTe 79 (84)
T 1wih_A 46 CTAAAIKAIRESGMNLNPE-VEGTLIRVPIPKVTS 79 (84)
T ss_dssp SHHHHHHHHHTTTCCCCCE-EETTEEEEECCCSSC
T ss_pred HHHHHHHHHHHCCCCCCcc-cCCCEEEEeCCCCCh
Confidence 4556667777666655554 35789996 577764
No 296
>4f87_A Plycb; lysin, bacteriophage, antimicrobial protein, viral protein; 1.40A {Streptococcus phage C1} PDB: 4f88_A
Probab=37.93 E-value=4.7 Score=20.56 Aligned_cols=19 Identities=26% Similarity=0.480 Sum_probs=14.5
Q ss_pred EecCcccCHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVM 75 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l 75 (82)
+.|..+||+.+++.+-.++
T Consensus 52 iipsinisksdveairkam 70 (72)
T 4f87_A 52 IIPSINISKSDVEAIRKAM 70 (72)
T ss_dssp TSCEEECCGGGHHHHHHHH
T ss_pred hCccccccHhHHHHHHHHh
Confidence 6788999999987665443
No 297
>2c1d_B SOXX; sulfur oxidation, cytochrome-C-type, oxidoreductase; HET: HEC; 1.92A {Paracoccus pantotrophus}
Probab=36.71 E-value=30 Score=19.40 Aligned_cols=15 Identities=7% Similarity=0.131 Sum_probs=13.0
Q ss_pred ccCHHHHHHHHHHHH
Q 042283 62 CFTKEDANYLVDVMD 76 (82)
Q Consensus 62 ~i~~~eid~~~~~l~ 76 (82)
.+|++|++.+++-|.
T Consensus 119 ~Ls~~ei~~l~aYl~ 133 (137)
T 2c1d_B 119 ILNAQQIEDVVAFLV 133 (137)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 799999999988765
No 298
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=36.37 E-value=58 Score=22.79 Aligned_cols=30 Identities=10% Similarity=0.218 Sum_probs=25.6
Q ss_pred CCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 51 YGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 51 ~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..+.|.+.-++-.+++|++.++++|++.+.
T Consensus 412 ~~~~i~~~~sig~~~~di~~l~~~L~~~~~ 441 (450)
T 3bc8_A 412 PCAYLNAAAAIGMKMQDVDLFIKRLDKCLN 441 (450)
T ss_dssp SSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 456788888889999999999999998753
No 299
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=36.02 E-value=60 Score=18.34 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=28.4
Q ss_pred HHHHHHHHcCceeeecCCCCCEE-EEecCcccCHHHHHHHHHHHHHhHh
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVF-RIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i-~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.+.+.+..++.+.. ++.+ .++|. .+.+++...++.+.+.+.
T Consensus 77 ~L~~~~~~~~~~~R~~---~d~F~ill~~--~~~~~~~~~~~~i~~~~~ 120 (177)
T 3hva_A 77 LMREQFGEEADLARFG---DSIFAALFKG--KTPEQAQAALQRLLKKVE 120 (177)
T ss_dssp HHHHHHGGGCEEEECS---SSEEEEEEET--CCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCceEEEec---CCeEEEEeCC--CCHHHHHHHHHHHHHHHH
Confidence 3444455567777765 4544 45554 588888888888887765
No 300
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=35.91 E-value=21 Score=19.75 Aligned_cols=21 Identities=19% Similarity=0.191 Sum_probs=11.9
Q ss_pred CCCCEEEEecCcccCHHHHHH
Q 042283 50 FYGNVFRIAPPLCFTKEDANY 70 (82)
Q Consensus 50 ~~~~~i~~~PPL~i~~~eid~ 70 (82)
..|+.|=+.||++++.+|+.+
T Consensus 75 ~dGDRVEIyrpl~~DPk~~Rr 95 (97)
T 2hj1_A 75 KEGDRIEIYRPLLADPKEIRR 95 (97)
T ss_dssp CTTCEEEECCCCC--------
T ss_pred CCCCEEEEEecccCCHHHHhh
Confidence 478999999999999988753
No 301
>2ksc_A Cyanoglobin; hemeprotein, 2/2 hemoglobin, GLBN, TRHBN, unknown function; HET: HEB; NMR {Synechococcus SP}
Probab=35.49 E-value=21 Score=19.95 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=25.6
Q ss_pred ecCCCCCEEE-EecCc----ccCHHHHHHHHHHHHHhHhc
Q 042283 47 KGGFYGNVFR-IAPPL----CFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 47 ~~g~~~~~i~-~~PPL----~i~~~eid~~~~~l~~~l~~ 81 (82)
++...++.++ -.-|+ .|++++.+..++.+.+++++
T Consensus 57 p~~Y~g~~m~~~H~~~~~~~~I~~~~fd~wl~~~~~al~e 96 (123)
T 2ksc_A 57 TDRFPGRSMRAAHQDLVENAGLTDVHFDAIAENLVLTLQE 96 (123)
T ss_dssp TTSCCSTHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHhhcccCCcCHHHHHHHHHHHHHHHHH
Confidence 3333355444 44568 89999999999999999864
No 302
>3ayh_A DNA-directed RNA polymerase III subunit RPC9; transcription; 2.19A {Schizosaccharomyces pombe}
Probab=35.41 E-value=9.4 Score=22.36 Aligned_cols=15 Identities=27% Similarity=0.395 Sum_probs=9.0
Q ss_pred CHHHHHHHHHHHHHh
Q 042283 64 TKEDANYLVDVMDCS 78 (82)
Q Consensus 64 ~~~eid~~~~~l~~~ 78 (82)
|++|++++++++.+.
T Consensus 120 see~ie~IL~~i~~~ 134 (136)
T 3ayh_A 120 KEEDIFKLVEKINTT 134 (136)
T ss_dssp TTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 455666666666554
No 303
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=35.38 E-value=29 Score=20.43 Aligned_cols=48 Identities=8% Similarity=-0.001 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..+.++.+.+.++|+-+........ ...+++.+++.++++.+|.+.+.
T Consensus 110 Gv~a~~f~aL~~~~InI~~is~Se~----~is~vv~~~d~~~Av~~Lh~~f~ 157 (167)
T 2dt9_A 110 EVPAKMFQAVASTGANIEMIATSEV----RISVIIPAEYAEAALRAVHQAFE 157 (167)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECSS----EEEEEEEGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHCCCCEEEEEccCC----EEEEEEeHHHHHHHHHHHHHHHc
Confidence 4678899999999986643322222 22367899999999999987753
No 304
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=34.59 E-value=37 Score=19.53 Aligned_cols=23 Identities=17% Similarity=0.372 Sum_probs=18.9
Q ss_pred cCcccCHHHHHHHHHHHHHhHhc
Q 042283 59 PPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 59 PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++-..+++|++++.+.|+++|.+
T Consensus 113 ~~~~~~~eel~~~~~~ir~~L~~ 135 (137)
T 3ohe_A 113 PPVPYTEEQQASVKAKLQPLLEQ 135 (137)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHh
Confidence 44567899999999999998863
No 305
>1dly_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.80A {Chlamydomonas eugametos} SCOP: a.1.1.1 PDB: 1uvx_A*
Probab=34.38 E-value=35 Score=20.44 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=24.2
Q ss_pred CCCEEE-EecCc--ccCHHHHHHHHHHHHHhHhc
Q 042283 51 YGNVFR-IAPPL--CFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 51 ~~~~i~-~~PPL--~i~~~eid~~~~~l~~~l~~ 81 (82)
.++.++ -.=|+ .|++++.|..++.+.+++++
T Consensus 103 ~g~~m~~~H~~l~~~I~~~~fd~Wl~~~~~aL~e 136 (164)
T 1dly_A 103 KGKDMRTAHKDLVPHLSDVHFQAVARHLSDTLTE 136 (164)
T ss_dssp CSCCHHHHHTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 344444 55578 89999999999999999864
No 306
>3hvw_A Diguanylate-cyclase (DGC); alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.70A {Pseudomonas aeruginosa}
Probab=34.20 E-value=49 Score=19.05 Aligned_cols=40 Identities=8% Similarity=-0.017 Sum_probs=25.7
Q ss_pred HHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 36 DKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 36 ~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+.+.+ .++.+..+ ..-+.+.|. .+.+++..+++.+.+.+.
T Consensus 66 ~~~~~-~~v~R~~~--deF~ill~~--~~~~~~~~~~~~l~~~~~ 105 (176)
T 3hvw_A 66 AELPD-FTLYKISP--TRFGLLLPR--QQQEETESVCLRLLRAFE 105 (176)
T ss_dssp HHCTT-SCEEEEET--TEEEEEEEG--GGGGGHHHHHHHHHHHTT
T ss_pred HHCCC-CeEEEecC--CEEEEEeCC--CCHHHHHHHHHHHHHHHh
Confidence 33345 77777753 333445554 577788888888887765
No 307
>1w5c_T Cytochrome C-550; photosynthesis, water oxidation, photosystem, membrane protein; HET: CL1 CLA PHO HEM HEC BCR; 3.2A {Thermosynechococcus elongatus} SCOP: i.5.1.1
Probab=33.97 E-value=31 Score=20.06 Aligned_cols=21 Identities=19% Similarity=0.243 Sum_probs=17.2
Q ss_pred EecCc-ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL-CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL-~i~~~eid~~~~~l~~ 77 (82)
.+|++ .+|++|++.+++-+..
T Consensus 126 ~Mp~~~~Lsd~ei~~laaYl~s 147 (163)
T 1w5c_T 126 IFPKMRNLTEKDLVAIAGHILV 147 (163)
T ss_dssp TSGGGTTCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHH
Confidence 58888 8999999998876653
No 308
>2l08_A Regulator of nonsense transcripts 3A; NESG, nonsense regulator, structural genomics, PSI-2, protei structure initiative; NMR {Homo sapiens}
Probab=33.95 E-value=7.8 Score=21.65 Aligned_cols=17 Identities=41% Similarity=0.517 Sum_probs=11.8
Q ss_pred EEEEecCcccCHHHHHHH
Q 042283 54 VFRIAPPLCFTKEDANYL 71 (82)
Q Consensus 54 ~i~~~PPL~i~~~eid~~ 71 (82)
+||-+|| .+|++++.+.
T Consensus 13 VIRrLPP-~Ltee~F~~~ 29 (97)
T 2l08_A 13 VIRRLPP-GLTKEQLEEQ 29 (97)
T ss_dssp EEECCCS-CSCHHHHTTT
T ss_pred EEeCCCC-CCCHHHHHHH
Confidence 6888888 5677776543
No 309
>3eye_A PTS system N-acetylgalactosamine-specific IIB component 1; structural genomics, phosphotransferase, PSI-2, protein structure initiative; 1.45A {Escherichia coli O157} SCOP: c.38.1.0
Probab=33.68 E-value=80 Score=19.08 Aligned_cols=42 Identities=17% Similarity=0.187 Sum_probs=28.8
Q ss_pred HHHHHcCc-----eeeecCCCCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 36 DKMKQMGV-----LIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 36 ~~~~~~Gl-----l~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
..+.+.|+ .+...+...+.-.+.+...++++|++.+-+..+.
T Consensus 95 ~~lve~Gv~i~~vNvG~m~~~~gk~~i~~~V~v~~ed~~~lk~L~~~ 141 (168)
T 3eye_A 95 RKLVEGGIDLKDVNVGNMHFSEGKKQISSKVYVDDQDLTDLRFIKQR 141 (168)
T ss_dssp HHHHHTTCCCCEEEECCBCCCTTCEEEETTEEECHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCEEEECCCcCCCCCEEEeccEeeCHHHHHHHHHHHHC
Confidence 34466664 3333334566788999999999999987666543
No 310
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=33.63 E-value=51 Score=20.13 Aligned_cols=21 Identities=24% Similarity=0.360 Sum_probs=18.1
Q ss_pred EEEecCcccCHHHHHHHHHHHHHh
Q 042283 55 FRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 55 i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
|||.|+ +...++.+++++.++
T Consensus 119 irlvP~---d~s~l~~if~Ams~C 139 (171)
T 1zyi_A 119 FRFVPS---DKSALEAMFTAMCEC 139 (171)
T ss_dssp EEEEES---CHHHHHHHHHHHHHH
T ss_pred EEEeCC---CccHHHHHHHHHHHH
Confidence 899998 578899999998876
No 311
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=33.42 E-value=30 Score=17.21 Aligned_cols=12 Identities=17% Similarity=0.293 Sum_probs=8.7
Q ss_pred ccCHHHHHHHHH
Q 042283 62 CFTKEDANYLVD 73 (82)
Q Consensus 62 ~i~~~eid~~~~ 73 (82)
-+|++||++++.
T Consensus 41 GLt~~EI~~Al~ 52 (54)
T 3ff5_A 41 GLTDEEIDLAFQ 52 (54)
T ss_dssp TCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 467888887765
No 312
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=32.96 E-value=1.1e+02 Score=20.34 Aligned_cols=33 Identities=6% Similarity=0.041 Sum_probs=24.9
Q ss_pred HHHHHHHHHcCceeeecC-----------CCCCEEEEecCcccC
Q 042283 32 LDVMDKMKQMGVLIGKGG-----------FYGNVFRIAPPLCFT 64 (82)
Q Consensus 32 ~~v~~~~~~~Gll~~~~g-----------~~~~~i~~~PPL~i~ 64 (82)
..+++.+.+.|++..+|- ...+.|.+.|||+..
T Consensus 153 ve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT~g 196 (286)
T 2p10_A 153 VEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTG 196 (286)
T ss_dssp HHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEEECSCC--
T ss_pred HHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEECCCCCCC
Confidence 356789999999987752 258999999998653
No 313
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=32.89 E-value=52 Score=20.74 Aligned_cols=28 Identities=21% Similarity=0.283 Sum_probs=24.9
Q ss_pred CEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 53 NVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 53 ~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..+++.|||--+++.++.+.+.+.+.+.
T Consensus 113 ~~i~~~~pl~~~p~~i~~la~~i~~~~~ 140 (269)
T 2xvy_A 113 TRVSVGLPLIGTTADAEAVAEALVASLP 140 (269)
T ss_dssp SEEEEECCSSCSHHHHHHHHHHHHHHSC
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHhch
Confidence 5689999999999999999999998864
No 314
>2c35_A Human RPB4, DNA-directed RNA polymerase II 16 kDa polypeptide; transcription, nucleotidyltransferase; 2.70A {Homo sapiens} SCOP: a.60.8.2
Probab=32.73 E-value=26 Score=20.87 Aligned_cols=22 Identities=23% Similarity=0.496 Sum_probs=18.4
Q ss_pred EecCc--ccCHHHHHHHHHHHHHh
Q 042283 57 IAPPL--CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL--~i~~~eid~~~~~l~~~ 78 (82)
+.|.+ .+++++++++++.+.+.
T Consensus 124 lipsl~~r~sdEeLe~ILd~l~k~ 147 (152)
T 2c35_A 124 LIPSLEGRFEDEELQQILDDIQTK 147 (152)
T ss_dssp HCGGGTTTSCHHHHHHHHHHHHHH
T ss_pred HHHhhccCCCHHHHHHHHHHHHHH
Confidence 66766 67999999999999874
No 315
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=32.36 E-value=77 Score=19.88 Aligned_cols=35 Identities=9% Similarity=0.154 Sum_probs=27.5
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+..+.+.++|.++... .+++++++++.+.+++.++
T Consensus 23 ~~~~~f~~dGyvvl~~-------------~l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 23 ALDSFYEEHGYLFLRN-------------VLDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHSEEEECS-------------CSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEeC-------------CCCHHHHHHHHHHHHHHHH
Confidence 4677788899887652 5789999999998887764
No 316
>1mz4_A Cytochrome C550; PSII associated cytochrome, electron transport; HET: HEM; 1.80A {Thermosynechococcus elongatus} SCOP: a.3.1.1 PDB: 1izl_V* 1s5l_V* 2axt_V* 3a0b_V* 3a0h_V* 3arc_V* 3bz1_V* 3bz2_V* 3kzi_V* 3prq_V* 3prr_V*
Probab=32.02 E-value=36 Score=19.03 Aligned_cols=21 Identities=19% Similarity=0.243 Sum_probs=17.0
Q ss_pred EecCc-ccCHHHHHHHHHHHHH
Q 042283 57 IAPPL-CFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL-~i~~~eid~~~~~l~~ 77 (82)
.||++ .+|++|+..++.-|..
T Consensus 100 ~MP~~~~Lsd~ei~alaaYl~~ 121 (137)
T 1mz4_A 100 IFPKMRNLTEKDLVAIAGHILV 121 (137)
T ss_dssp TSGGGTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHH
Confidence 58887 5999999999887654
No 317
>2l2l_B Methyl-CPG-binding domain protein 2; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=31.80 E-value=42 Score=15.27 Aligned_cols=15 Identities=20% Similarity=0.193 Sum_probs=11.1
Q ss_pred cCcccCHHHHHHHHH
Q 042283 59 PPLCFTKEDANYLVD 73 (82)
Q Consensus 59 PPL~i~~~eid~~~~ 73 (82)
.++++|+++|..=-+
T Consensus 3 ~~~~Vte~DIr~QE~ 17 (36)
T 2l2l_B 3 KAFIVTDEDIRKQEE 17 (36)
T ss_dssp TCCCCCHHHHHHHHH
T ss_pred ceeeeCHHHHHHHHH
Confidence 568899999875433
No 318
>2cu1_A Mitogen-activated protein kinase kinase kinase 2; PB1 domain, MAPK/ERK kinase kinase 2, MEK kinase 2, MEKK 2, signaling protein; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=31.38 E-value=33 Score=19.34 Aligned_cols=17 Identities=29% Similarity=0.409 Sum_probs=14.8
Q ss_pred ccCHHHHHHHHHHHHHh
Q 042283 62 CFTKEDANYLVDVMDCS 78 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~ 78 (82)
+-+++|+|++++.++.+
T Consensus 58 l~sQeDLDkaIellDrs 74 (103)
T 2cu1_A 58 LTTQDDLDKAVELLDRS 74 (103)
T ss_dssp CCSHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHccC
Confidence 45899999999999876
No 319
>4b0t_A PUP--protein ligase; pupylation, depupylation, prokaryotic ubiquitin-like protein, proteasome; HET: ADP; 2.16A {Corynebacterium glutamicum}
Probab=31.15 E-value=1.5e+02 Score=21.31 Aligned_cols=49 Identities=10% Similarity=0.153 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHcCce-------eeecCCCCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 30 ETLDVMDKMKQMGVL-------IGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll-------~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
.-.++++.+.+.+.- +.........|.+.-|+--++++++++++.++.+
T Consensus 421 lRG~~i~~~~~~~~~~s~dw~~l~l~~~~~~~v~l~DPf~~~~~~v~~Ll~~~~~~ 476 (493)
T 4b0t_A 421 LRGRILKAADTLGVPVTVDWMRHKVNRPEPQSVELGDPFSAVNSEVDQLIEYMTVH 476 (493)
T ss_dssp HHHHHHHHHHHHTCCEEECSSEEEECSSSCEEEECCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHhhCCCeEEeeEEEecCCCCceeeeCCCCCCcchHHHHHHHHHHHhh
Confidence 344677777766542 2222233457889999999999999999998765
No 320
>2ig3_A Group III truncated haemoglobin; truncated hemoglobin, 2-ON-2 globin, oxygen storage-transpor; HET: HEM; 2.15A {Campylobacter jejuni}
Probab=31.04 E-value=26 Score=20.03 Aligned_cols=40 Identities=23% Similarity=0.435 Sum_probs=29.0
Q ss_pred CceeeecCCCCCEEEEecCcc-cCHHHHHHHHHHHHHhHhc
Q 042283 42 GVLIGKGGFYGNVFRIAPPLC-FTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 42 Gll~~~~g~~~~~i~~~PPL~-i~~~eid~~~~~l~~~l~~ 81 (82)
+++..++.+.|+.+.-.=|+. |++++.+.-++.+.+++++
T Consensus 56 ~~lgGp~~Y~G~pm~~H~~l~~I~~~~fd~Wl~~~~~al~e 96 (127)
T 2ig3_A 56 GMLLGEGDYNGQPLKKHLDLPPFPQEFFEIWLKLFEESLNI 96 (127)
T ss_dssp HHHTSCSCCCSCHHHHHHSSCCCCTTHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCCCHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 344445544566555555688 9999999999999998864
No 321
>3lfj_A Manxb, phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component...; manxb PTS; 1.56A {Thermoanaerobacter tengcongensis}
Probab=30.97 E-value=95 Score=19.12 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=29.7
Q ss_pred HHHHHcCc-----eeeecCCCCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 36 DKMKQMGV-----LIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 36 ~~~~~~Gl-----l~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
..+.+.|+ .+...+...+...+.+...++++|++.+-+..+.
T Consensus 111 ~~lve~Gv~i~~vNvG~m~~~~gk~~i~~~V~v~~ed~~~lk~L~~~ 157 (187)
T 3lfj_A 111 KRVMDGGLPITTLNIGGVAKTPQRKGISQSVSLSEDEVKTLLELKTK 157 (187)
T ss_dssp HHHHHTTCCCSEEEEEEBCCCTTSEECSSSBEECHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCEEEECCCCCCCCCEEEeccEeeCHHHHHHHHHHHhc
Confidence 34456664 4444444566788999999999999988776554
No 322
>3m91_B Prokaryotic ubiquitin-like protein PUP; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis}
Probab=30.88 E-value=45 Score=15.83 Aligned_cols=17 Identities=24% Similarity=0.382 Sum_probs=13.3
Q ss_pred CHHHHHHHHHHHHHhHh
Q 042283 64 TKEDANYLVDVMDCSMT 80 (82)
Q Consensus 64 ~~~eid~~~~~l~~~l~ 80 (82)
..+++|.+++-|+.+|+
T Consensus 12 ~~~~~D~lLDeId~vLE 28 (44)
T 3m91_B 12 LTEETDDLLDEIDDVLE 28 (44)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHH
Confidence 35678888888888875
No 323
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A
Probab=30.81 E-value=26 Score=24.23 Aligned_cols=22 Identities=0% Similarity=0.116 Sum_probs=19.0
Q ss_pred CcccCHHHHHHHHHHHHHhHhc
Q 042283 60 PLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 60 PL~i~~~eid~~~~~l~~~l~~ 81 (82)
==++|++|++++.+.+.+++.+
T Consensus 386 ~rTLtd~ev~~~~~~i~~~l~~ 407 (415)
T 3cmq_A 386 ERTLSQREVRHIHQALQEAAVQ 407 (415)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 3689999999999999988864
No 324
>2ook_A Hypothetical protein; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: c.13.2.2
Probab=30.71 E-value=47 Score=18.70 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=25.3
Q ss_pred CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 52 GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 52 ~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++++.+..-=.+|.+|.+.++..+++.+++
T Consensus 19 ~~vl~v~~~G~lt~eD~~~l~~~i~~~l~~ 48 (127)
T 2ook_A 19 VFFVTLKAIGTLTHEDYLVITPMLEGALSQ 48 (127)
T ss_dssp EEEEEEEEEEEECHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEeeeECHHHHHHHHHHHHHHHhh
Confidence 567777777789999999999999998865
No 325
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=30.48 E-value=1e+02 Score=19.34 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=27.2
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
...+.+.++|.++... .+++++++++.+.+++.++.
T Consensus 7 e~~~~f~~dGyvvl~~-------------~l~~e~v~~l~~~~~~~~~~ 42 (291)
T 2opw_A 7 SQLQKFQQDGFLVLEG-------------FLSAEECVAMQQRIGEIVAE 42 (291)
T ss_dssp HHHHHHHHHSEEEETT-------------SSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEecC-------------CCCHHHHHHHHHHHHHHHhh
Confidence 4456677888877653 56899999999998887653
No 326
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=30.00 E-value=60 Score=18.33 Aligned_cols=19 Identities=5% Similarity=0.169 Sum_probs=16.5
Q ss_pred ccCHHHHHHHHHHHHHhHh
Q 042283 62 CFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~l~ 80 (82)
-.+.++++++.+.|+++|.
T Consensus 116 ~~~~~~l~~~~~~ir~~l~ 134 (135)
T 3r6f_A 116 SVSDKEYSEMVEEARLRVS 134 (135)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhc
Confidence 4588999999999999885
No 327
>4ayb_F DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_F 2y0s_F 2waq_F 4b1o_F 4b1p_U 2pmz_F 3hkz_F
Probab=29.80 E-value=13 Score=21.14 Aligned_cols=52 Identities=13% Similarity=0.143 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHcCcee-------eecCCCCCEEE-EecCc---ccCHHHHHHHHHHHHHhHh
Q 042283 29 AETLDVMDKMKQMGVLI-------GKGGFYGNVFR-IAPPL---CFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~-------~~~g~~~~~i~-~~PPL---~i~~~eid~~~~~l~~~l~ 80 (82)
+.+..+.+.+.+.|+-- .-|....+=+| +.|.+ ++++++++++++.+.+.+.
T Consensus 50 e~a~~l~e~L~~~~l~~~~~a~IanL~P~~~dElrali~s~e~~~~~deeL~~IL~~l~ky~~ 112 (113)
T 4ayb_F 50 ESAQKVVEELSSIISREDVRAVLASICPITPDEVRSILIMDSNRTYTSEDIQKIIDIIRKYIK 112 (113)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHCCCSSCCCCTTTTTTCCCCCCCTHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHcCCCCHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHhc
Confidence 45566777777766421 11223345566 66765 5899999999999988764
No 328
>2jrh_A Mitogen-activated protein kinase kinase kinase 3; kinase signaling domain, transferase; NMR {Homo sapiens} PDB: 2pph_A
Probab=29.78 E-value=40 Score=18.59 Aligned_cols=19 Identities=21% Similarity=0.366 Sum_probs=15.6
Q ss_pred ccCHHHHHHHHHHHHHhHh
Q 042283 62 CFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~l~ 80 (82)
.-+.+|+|++++.++.+-.
T Consensus 54 L~~Q~DLDkAvelLDrs~~ 72 (94)
T 2jrh_A 54 LKNQDDLDKAIDILDRSSS 72 (94)
T ss_dssp CCSHHHHHHHHHHHHHSTT
T ss_pred ccCHHHHHHHHHHhccCcc
Confidence 3589999999999998643
No 329
>1iuh_A 2'-5' RNA ligase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: d.61.1.2
Probab=29.72 E-value=50 Score=19.80 Aligned_cols=28 Identities=4% Similarity=-0.251 Sum_probs=22.8
Q ss_pred CCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 52 GNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 52 ~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
.-+|.+..+-.+++++++++.+.++++.
T Consensus 37 ~~HiTL~flgev~~~~~~~l~~~l~~~~ 64 (198)
T 1iuh_A 37 QLHLTLLFLGERPEEELPDYLALGHRLA 64 (198)
T ss_dssp GCEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcCCHHHHHHHHHHHHHHh
Confidence 4578888777889999999988888775
No 330
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=29.60 E-value=34 Score=19.99 Aligned_cols=27 Identities=7% Similarity=-0.143 Sum_probs=21.4
Q ss_pred EEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 54 VFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 54 ~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+++.|||-..+.-++.+.+.++++++
T Consensus 122 ~i~~~~pLG~~p~l~~~l~~ri~ea~~ 148 (156)
T 1tjn_A 122 KVVICEPIGEDYFVTYAILNSVFRIGR 148 (156)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHHCCC-
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 567889999888888888888877654
No 331
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=29.54 E-value=62 Score=18.94 Aligned_cols=22 Identities=14% Similarity=0.240 Sum_probs=18.3
Q ss_pred CcccCHHHHHHHHHHHHHhHhc
Q 042283 60 PLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 60 PL~i~~~eid~~~~~l~~~l~~ 81 (82)
+-..++++++++.+.|+++|.+
T Consensus 114 ~~~~~~eel~~~a~kIr~~L~~ 135 (149)
T 3i24_A 114 GVIRAQSSQTQLVDLLRDKLSN 135 (149)
T ss_dssp CCBCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHh
Confidence 3457899999999999999864
No 332
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=29.34 E-value=61 Score=18.81 Aligned_cols=22 Identities=5% Similarity=0.009 Sum_probs=18.3
Q ss_pred CcccCHHHHHHHHHHHHHhHhc
Q 042283 60 PLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 60 PL~i~~~eid~~~~~l~~~l~~ 81 (82)
+--.++++++++.+.|+++|+.
T Consensus 127 ~~~~~~~~l~~~~~~lr~~l~~ 148 (149)
T 3ksv_A 127 TVKVASDELAEDAKRYSEAIAK 148 (149)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHhh
Confidence 4456889999999999998864
No 333
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=28.76 E-value=49 Score=20.02 Aligned_cols=21 Identities=14% Similarity=0.264 Sum_probs=18.0
Q ss_pred CcccCHHHHHHHHHHHHHhHh
Q 042283 60 PLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 60 PL~i~~~eid~~~~~l~~~l~ 80 (82)
|..+|++||++.+..+..-+.
T Consensus 11 ~vlis~~~I~~~i~rlA~eI~ 31 (181)
T 3acd_A 11 PVQISAEAIKKRVEELGGEIA 31 (181)
T ss_dssp SCCBCHHHHHHHHHHHHHHHH
T ss_pred cEEeCHHHHHHHHHHHHHHHH
Confidence 578999999999999887664
No 334
>1s69_A Cyanoglobin, hemoglobin, HB; on 2 helical fold, heme, iron, cyanoba oxygen binding, hexacoordinate, truncated, oxygen storage-T complex; HET: FLC HEM; 1.68A {Synechocystis SP} SCOP: a.1.1.1 PDB: 1s6a_A* 1mwb_A* 1rtx_A* 2hz1_A* 2hz3_A* 2hz2_A*
Probab=28.60 E-value=32 Score=19.07 Aligned_cols=30 Identities=13% Similarity=0.236 Sum_probs=22.8
Q ss_pred CCEEE-EecCc----ccCHHHHHHHHHHHHHhHhc
Q 042283 52 GNVFR-IAPPL----CFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 52 ~~~i~-~~PPL----~i~~~eid~~~~~l~~~l~~ 81 (82)
++.++ -.=+| .|++++.+..++.+.+++++
T Consensus 63 g~~m~~~H~~l~~~~~I~~~~f~~wl~~l~~al~e 97 (124)
T 1s69_A 63 GRYMREAHKELVENHGLNGEHFDAVAEDLLATLKE 97 (124)
T ss_dssp SCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHhCcccCCCcCHHHHHHHHHHHHHHHHH
Confidence 44333 44468 89999999999999998864
No 335
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2
Probab=28.38 E-value=47 Score=18.71 Aligned_cols=30 Identities=10% Similarity=0.141 Sum_probs=24.5
Q ss_pred CCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 52 GNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 52 ~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
++++.+..-=.+|.+|.++++..+++.+++
T Consensus 19 ~~vl~v~~~G~lt~~d~~~l~~~l~~~l~~ 48 (126)
T 2q3l_A 19 DFYLAFKAVGKLTHEDYEQMTPLLESALAG 48 (126)
T ss_dssp EEEEEEEEEEEECHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEEEeeECHHHHHHHHHHHHHHHHh
Confidence 456777777788999999999999988764
No 336
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=28.33 E-value=15 Score=17.08 Aligned_cols=10 Identities=10% Similarity=0.401 Sum_probs=6.9
Q ss_pred cCHHHHHHHH
Q 042283 63 FTKEDANYLV 72 (82)
Q Consensus 63 i~~~eid~~~ 72 (82)
+|++|+|.++
T Consensus 23 ltDEeLD~mL 32 (39)
T 3lqv_P 23 LSDEELDAMF 32 (39)
T ss_dssp CCHHHHHHTC
T ss_pred CCHHHHHHhC
Confidence 4778887653
No 337
>3p3v_A PTS system, N-acetylgalactosamine-specific IIB CO; PTS IIB component, phosphotransferase, sugar transport, STRU genomics; HET: PGE; 1.65A {Streptococcus pyogenes serotype M1} SCOP: c.38.1.0
Probab=27.98 E-value=1e+02 Score=18.48 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=28.9
Q ss_pred HHHHHcCc-----eeeecCCCCCEEEEecCcccCHHHHHHHHHHHH
Q 042283 36 DKMKQMGV-----LIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMD 76 (82)
Q Consensus 36 ~~~~~~Gl-----l~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~ 76 (82)
..+.+.|+ .+...+...+...+.+...++++|++.+-+..+
T Consensus 92 ~~lv~~g~~i~~vNvG~m~~~~g~~~i~~~v~v~~ed~~~lk~L~~ 137 (163)
T 3p3v_A 92 KLLVEGGVPITEINIGNIHKTDDKVAITQFISLGETDKSAIRCLAH 137 (163)
T ss_dssp HHHHHTTCCCCEEEEEEBCCCTTSEESSSSBEECHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCEEEECCCcCCCCCEEEeccEeeCHHHHHHHHHHHH
Confidence 34456664 444444456778899999999999988766554
No 338
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=27.66 E-value=49 Score=22.33 Aligned_cols=27 Identities=15% Similarity=-0.010 Sum_probs=22.4
Q ss_pred CCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 52 GNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 52 ~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
++.|||+.-+--++++++.+.++|+++
T Consensus 388 ~~~iRlS~G~e~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 388 GTLIRLHIGLEDVDDLIADLDAGFARI 414 (415)
T ss_dssp SCEEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred CCEEEEEecCCCHHHHHHHHHHHHHhh
Confidence 579999999988888888888887653
No 339
>3zzp_A TS9, ribosomal protein S6; protein folding, RNA-binding; 0.96A {Thermus thermophilus}
Probab=27.25 E-value=57 Score=17.08 Aligned_cols=64 Identities=8% Similarity=0.097 Sum_probs=36.2
Q ss_pred cceEEEEEeeeCCCCchHHHHHHHHHHHH-cCcee----eecC-C-CCCEEEEecCcccCHHHHHHHHHHHHHhHhc
Q 042283 12 WGFMLGVEFVTDSQLRKAETLDVMDKMKQ-MGVLI----GKGG-F-YGNVFRIAPPLCFTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 12 ~Glm~gie~~~~~~~~~~~~~~v~~~~~~-~Gll~----~~~g-~-~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~ 81 (82)
.|...-+.|..++ +....+-+.+.= ..++- +.-. . ..-++.+.|- ++++++...++.+...+.+
T Consensus 4 ~G~Yvl~~~~a~~----~~i~Eler~~rine~VlR~l~vr~d~~r~YE~m~Il~P~--l~ee~~~~~vek~~~~i~~ 74 (77)
T 3zzp_A 4 QGYTTWYQVEMPE----DRVNDLARELRIRDNVRRVMVVASTTPGRYEVNIVLNPN--LDQSQLQNEKEIIQRALEN 74 (77)
T ss_dssp CTTEEEEEEECCH----HHHHHHHHHHHTSTTEEEEEEEECSSTTEEEEEEEECTT--CCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEeCH----hHHHHHHHHhCCCHHHHHHHHHhccCCCceEEEEEECCC--CCHHHHHHHHHHHHHHHHh
Confidence 4666666775432 345555555543 34432 2111 1 1123334443 6899999999999998864
No 340
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=27.14 E-value=37 Score=19.97 Aligned_cols=48 Identities=6% Similarity=0.047 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
....++.+.+.++|+-+.........+. +++.+++.++.+..|.+.+.
T Consensus 118 Gv~a~i~~aL~~~~InI~~istse~~is----~vv~~~d~~~av~~Lh~~f~ 165 (167)
T 2re1_A 118 GVAAKIFRTLAEEGINIQMISTSEIKVS----VLIDEKYMELATRVLHKAFN 165 (167)
T ss_dssp CHHHHHHHHHHHTTCCCCEEEECSSEEE----EEEEGGGHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHCCCcEEEEEcccCEEE----EEEeHHHHHHHHHHHHHHhc
Confidence 4678899999999986643222333333 45677889999998887653
No 341
>2gc4_D Cytochrome C-L; electron transfer, methylamine dehydrogenase, blue copper protein, oxidoreductase, electron transport; HET: TRQ HEM; 1.90A {Paracoccus denitrificans} SCOP: a.3.1.1 PDB: 2gc7_D* 2mta_C* 1mg2_D* 1mg3_D*
Probab=26.54 E-value=60 Score=18.41 Aligned_cols=21 Identities=10% Similarity=0.080 Sum_probs=17.1
Q ss_pred EecCcc--cCHHHHHHHHHHHHH
Q 042283 57 IAPPLC--FTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL~--i~~~eid~~~~~l~~ 77 (82)
.+||+. +|++|+..+++-|..
T Consensus 100 ~Mp~~~~~ls~~ei~~l~~Yl~~ 122 (147)
T 2gc4_D 100 QMGPMWGSLTLDEMLRTMAWVRH 122 (147)
T ss_dssp TCCCCTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHH
Confidence 578874 899999999887765
No 342
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=26.49 E-value=89 Score=19.31 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 28 KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 28 ~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+..++++.+.+.++|+.+....+.. ++++ +++.+++.++++.+|-+++.
T Consensus 129 ~GVaak~F~aLa~~~INI~mIstSE--i~IS--~vV~~~d~~~Av~aLH~~F~ 177 (200)
T 4go7_X 129 PGVTATFCEALAAVGVNIELISTSE--IRIS--VLCRDTELDKAVVALHEAFG 177 (200)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECS--SEEE--EEEEGGGHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHCCCCEEEEEccC--CEEE--EEEeHHHHHHHHHHHHHHhC
Confidence 4578899999999998765543222 3333 67899999999999998874
No 343
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=26.23 E-value=77 Score=19.02 Aligned_cols=49 Identities=10% Similarity=0.017 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 28 KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 28 ~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+..+.++.+.+.++|+-+.........|- +++.+++.++++.+|-+.+.
T Consensus 110 ~Gvaa~~f~aLa~~~InI~~IstSei~Is----~vV~~~d~~~Av~aLH~~f~ 158 (181)
T 3s1t_A 110 PGVTATFCEALAAVGVNIELISTSEIRIS----VLCRDTELDKAVVALHEAFG 158 (181)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEETTEEE----EEEEGGGHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHCCCcEEEEEcCCCEEE----EEEeHHHHHHHHHHHHHHHc
Confidence 45678899999999976544322233332 67899999999999988873
No 344
>3iyd_F RNA polymerase sigma factor RPOD; transcription, initiation, class I, activator, RNA polymeras holoenzyme, sigma70, open complex, CAP, CRP; HET: DNA CMP; 19.80A {Escherichia coli k-12}
Probab=26.00 E-value=14 Score=26.65 Aligned_cols=42 Identities=12% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 31 TLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
...++....++|.++. ..+--.+|+-.++.++|+.++..|.+
T Consensus 9 ~~~li~~~k~~g~lt~-----~ei~~~l~~~~~~~~~~~~~~~~l~~ 50 (613)
T 3iyd_F 9 LKLLVTRGKEQGYLTY-----AEVNDHLPEDIVDSDQIEDIIQMIND 50 (613)
T ss_dssp -----------------------------------------------
T ss_pred HHHHHHHhhhcCcccH-----HHHHHhCcccCCCHHHHHHHHHHHHH
Confidence 3456677778888765 46777889999999999988877653
No 345
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=25.81 E-value=49 Score=14.07 Aligned_cols=13 Identities=23% Similarity=0.388 Sum_probs=9.2
Q ss_pred cCHHHHHHHHHHH
Q 042283 63 FTKEDANYLVDVM 75 (82)
Q Consensus 63 i~~~eid~~~~~l 75 (82)
+++.+|+++++--
T Consensus 9 fdekqieelldnc 21 (31)
T 4h62_V 9 FDEKQIEELLDNC 21 (31)
T ss_dssp -CHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 4688888888753
No 346
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=25.76 E-value=1.2e+02 Score=19.37 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHcCceeeecCCCCCEEEEecCcccC
Q 042283 30 ETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFT 64 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~ 64 (82)
.+..+...+..+|++..-....+...++.|.+..+
T Consensus 184 Ra~~~L~~l~~~GllwvD~q~~ge~~Yw~P~lf~~ 218 (234)
T 3cuq_A 184 RARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTD 218 (234)
T ss_dssp HHHHHHHHHHHHTSCEEESSSSSSCEEECTTSSCC
T ss_pred HHHHHHHHHHhCCCEEEeCCCCCcceeecchhhcc
Confidence 45667778889999887654345778999988653
No 347
>2c60_A Human mitogen-activated protein kinase kinase kinase 3 isoform 2; MAP3K3, MAP/ERK kinase kinase 3, MAPKKK3, MEKK3, serine threonine phosphorylation; HET: MSE; 1.25A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_B
Probab=25.71 E-value=46 Score=18.88 Aligned_cols=18 Identities=22% Similarity=0.414 Sum_probs=15.1
Q ss_pred cCHHHHHHHHHHHHHhHh
Q 042283 63 FTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 63 i~~~eid~~~~~l~~~l~ 80 (82)
-+.+|+|++++.++.+-.
T Consensus 82 ~~Q~DLDkAvelLDrs~~ 99 (111)
T 2c60_A 82 KNQDDLDKAIDILDRSSS 99 (111)
T ss_dssp CSHHHHHHHHHHHHHCSS
T ss_pred ccHHHHHHHHHHhccCcc
Confidence 489999999999987643
No 348
>3u5c_Z RP45, S31, YS23, 40S ribosomal protein S25-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_V 3o30_Q 3o2z_Q 3u5g_Z
Probab=25.67 E-value=61 Score=18.39 Aligned_cols=28 Identities=4% Similarity=0.032 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEE
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFR 56 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~ 56 (82)
..+..+.+.+.++|+|...+..+...|+
T Consensus 74 SLAR~aLreL~~kGlIk~V~kh~~q~IY 101 (108)
T 3u5c_Z 74 SLARIALRHLEKEGIIKPISKHSKQAIY 101 (108)
T ss_dssp THHHHHHHHHSSSSSCEEEECCSSCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEecCCCEEEE
Confidence 3677889999999999888754444443
No 349
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=25.66 E-value=86 Score=18.09 Aligned_cols=30 Identities=10% Similarity=0.174 Sum_probs=24.9
Q ss_pred CCCEEEEecCcccCHHHHHHHHHHHHH--hHh
Q 042283 51 YGNVFRIAPPLCFTKEDANYLVDVMDC--SMT 80 (82)
Q Consensus 51 ~~~~i~~~PPL~i~~~eid~~~~~l~~--~l~ 80 (82)
.-+.|.+.||+....++.+.++..+.+ .|+
T Consensus 113 ~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~ 144 (189)
T 3p9n_A 113 PVDLVLADPPYNVDSADVDAILAALGTNGWTR 144 (189)
T ss_dssp CCSEEEECCCTTSCHHHHHHHHHHHHHSSSCC
T ss_pred CccEEEECCCCCcchhhHHHHHHHHHhcCccC
Confidence 457899999999888899999988877 554
No 350
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B*
Probab=25.21 E-value=58 Score=24.47 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=22.2
Q ss_pred EEEecC-cccCHHHHHHHHHHHHHhHhcC
Q 042283 55 FRIAPP-LCFTKEDANYLVDVMDCSMTKK 82 (82)
Q Consensus 55 i~~~PP-L~i~~~eid~~~~~l~~~l~~~ 82 (82)
+.|.++ =|+|++|++.+.+.+.+++.++
T Consensus 747 l~~r~~~rTLtd~ei~~~~~~i~~~l~~~ 775 (785)
T 1b7y_B 747 LRFRHPKRTLRDEEVEEAVSRVAEALRAR 775 (785)
T ss_dssp EEECCSSSCCCHHHHHHHHHHHHHHHHCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 334443 6999999999999999998764
No 351
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=25.14 E-value=1.2e+02 Score=19.39 Aligned_cols=36 Identities=14% Similarity=0.051 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccC
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFT 64 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~ 64 (82)
..+..+...+..+|++..-....+...++.|.+..+
T Consensus 196 ~Ra~~~L~~l~~~G~lwvD~q~~~e~~Yw~P~lf~~ 231 (233)
T 1u5t_A 196 VRSKSALDEMVANGLLWIDYQGGAEALYWDPSWITR 231 (233)
T ss_dssp HHHHHHHHHHHHTTSSEEECSSSSSCEEECGGGGGC
T ss_pred HHHHHHHHHHHHCCCEEEeCCCCCccceechhhhhc
Confidence 355677788899999887643334588999987653
No 352
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=25.02 E-value=78 Score=17.01 Aligned_cols=20 Identities=10% Similarity=0.258 Sum_probs=15.3
Q ss_pred cccCHHHHHHHHHHHHHhHh
Q 042283 61 LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 61 L~i~~~eid~~~~~l~~~l~ 80 (82)
|-+|++|++.+..-|.+.|.
T Consensus 20 L~l~eeE~~~~~~~l~~Il~ 39 (92)
T 3kfu_G 20 IRLSPEEEALLLQDLKRILD 39 (92)
T ss_dssp CCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 56788898888888777653
No 353
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=24.98 E-value=59 Score=16.78 Aligned_cols=18 Identities=17% Similarity=0.139 Sum_probs=14.3
Q ss_pred cCcccCHHHHHHHHHHHH
Q 042283 59 PPLCFTKEDANYLVDVMD 76 (82)
Q Consensus 59 PPL~i~~~eid~~~~~l~ 76 (82)
=|..+|+++|.+++....
T Consensus 9 Lp~~~te~~l~~~F~~~G 26 (91)
T 2lxi_A 9 LPQAATEDDIRGQLQSHG 26 (91)
T ss_dssp CCSSCCHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHhC
Confidence 367899999999887653
No 354
>3h0l_C Glutamyl-tRNA(Gln) amidotransferase subunit C; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_C 3h0r_C*
Probab=24.91 E-value=78 Score=17.02 Aligned_cols=20 Identities=10% Similarity=0.172 Sum_probs=15.8
Q ss_pred cccCHHHHHHHHHHHHHhHh
Q 042283 61 LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 61 L~i~~~eid~~~~~l~~~l~ 80 (82)
|-++++|++.+..-|.+.|.
T Consensus 16 L~l~eee~~~~~~~l~~Il~ 35 (94)
T 3h0l_C 16 LELKEEEIEVFQKQLSDILD 35 (94)
T ss_dssp CCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 56789999988888877664
No 355
>1ov9_A VICH protein; dimer, helix, coiled-coil, DNA binding protein; 2.30A {Vibrio cholerae} SCOP: a.155.1.1
Probab=24.68 E-value=51 Score=15.93 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=14.7
Q ss_pred cCHHHHHHHHHHHHHhHhc
Q 042283 63 FTKEDANYLVDVMDCSMTK 81 (82)
Q Consensus 63 i~~~eid~~~~~l~~~l~~ 81 (82)
.|-++++++.+.|..++++
T Consensus 20 lsle~Lee~~eKl~~Vv~E 38 (50)
T 1ov9_A 20 LTIEQLEEALDKLTTVVQE 38 (50)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 4567888888888888764
No 356
>1xw3_A Sulfiredoxin; retroreduction, sulfinic acid, peroxiredoxin, ATP, oxidoreductase; 1.65A {Homo sapiens} SCOP: d.268.1.4 PDB: 1xw4_X* 3cyi_A* 2rii_X 3hy2_X*
Probab=24.67 E-value=70 Score=18.04 Aligned_cols=24 Identities=21% Similarity=0.301 Sum_probs=19.1
Q ss_pred CEEEEecCcccCHHHHHHHHHHHHH
Q 042283 53 NVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 53 ~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
.+.+-.|| +++++.++++++.+++
T Consensus 21 ~I~~p~~~-~~d~~kv~eL~~SI~~ 44 (110)
T 1xw3_A 21 VLIRPLPS-VLDPAKVQSLVDTIRE 44 (110)
T ss_dssp GEECCSCC-CCCHHHHHHHHHHHHH
T ss_pred HccCCCCC-ccCHHHHHHHHHHHHh
Confidence 34445577 9999999999999886
No 357
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=24.34 E-value=50 Score=16.23 Aligned_cols=19 Identities=5% Similarity=0.205 Sum_probs=14.2
Q ss_pred ccCHHHHHHHHHHHHHhHh
Q 042283 62 CFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~l~ 80 (82)
-.+.+|+|.+++.+.+.+.
T Consensus 19 GY~~~EVD~FLd~v~~~~~ 37 (57)
T 2wuj_A 19 GYDEDEVNEFLAQVRKDYE 37 (57)
T ss_dssp EEEHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHH
Confidence 3567899999988776653
No 358
>2xzm_8 RPS25E,; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_8
Probab=24.08 E-value=79 Score=18.85 Aligned_cols=23 Identities=9% Similarity=-0.057 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHcCceeeecCCC
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFY 51 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~ 51 (82)
..+..+.+.|.++|+|...+..+
T Consensus 78 SLARkaLreL~~kGlIk~V~kh~ 100 (143)
T 2xzm_8 78 SLARQLMRTMADRKLVEKVAKNG 100 (143)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEET
T ss_pred HHHHHHHHHHHHCCCEEEEecCC
Confidence 46788999999999998877533
No 359
>2pg9_A Phosphomevalonate kinase; GHMP kinase superfamily, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A* 3gon_A*
Probab=24.03 E-value=1.3e+02 Score=19.58 Aligned_cols=43 Identities=5% Similarity=-0.014 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcCceeeecCCC--CCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 31 TLDVMDKMKQMGVLIGKGGFY--GNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 31 ~~~v~~~~~~~Gll~~~~g~~--~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
...+++.+.+.|.+...+|.. +.++-+.|. +++.+++.+.+++
T Consensus 276 l~~l~~~a~~~Ga~ak~sGaGgGg~vial~~~----~~~~~~~~~~l~~ 320 (337)
T 2pg9_A 276 LRQLKEASQDLQAVAKSSGAGGGDCGIALSFD----AQSTKTLKNRWAD 320 (337)
T ss_dssp HHHHHHTTTTSSEEEEECTTCSSSEEEEEECS----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEeCCCCccEEEEEECC----HHHHHHHHHHHHH
Confidence 345666777788776656543 334555553 5667777766654
No 360
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=23.64 E-value=78 Score=17.38 Aligned_cols=23 Identities=22% Similarity=0.262 Sum_probs=18.0
Q ss_pred ecCcccCHHHHHHHHHHHHHhHh
Q 042283 58 APPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 58 ~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.-.+|+++.+++++..++.++
T Consensus 93 ~p~~~~t~e~a~~~l~~a~~v~~ 115 (122)
T 1wol_A 93 APYEYYTERDADECINCAIRILN 115 (122)
T ss_dssp SGGGGCCHHHHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHHHHHH
Confidence 44458999999999988877654
No 361
>2npt_B Mitogen-activated protein kinase kinase kinase 2; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2
Probab=23.60 E-value=55 Score=18.26 Aligned_cols=18 Identities=28% Similarity=0.433 Sum_probs=15.1
Q ss_pred ccCHHHHHHHHHHHHHhH
Q 042283 62 CFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 62 ~i~~~eid~~~~~l~~~l 79 (82)
.-+.+|+|++++.++.+-
T Consensus 70 L~~Q~DLDkAvelLDrs~ 87 (100)
T 2npt_B 70 LTTQDDLDKAVELLDRSI 87 (100)
T ss_dssp CCCHHHHHHHHHHHHHCS
T ss_pred cccHHHHHHHHHHhccCc
Confidence 358999999999998764
No 362
>1r6n_A HPV11 E2 TAD, HPV11 regulatory protein E2, E2 protein; , transcription, replication, transcription, replication; HET: 434; 2.40A {Human papillomavirus type 11} SCOP: b.91.1.1 PDB: 1r6k_A
Probab=23.14 E-value=46 Score=21.16 Aligned_cols=33 Identities=24% Similarity=0.503 Sum_probs=25.0
Q ss_pred HHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 34 VMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 34 v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
+.-.++++|+.-.. +...|||.+|+....++|+
T Consensus 48 Lly~AR~~G~~~lG-------~q~VP~l~VSe~KAk~AIe 80 (211)
T 1r6n_A 48 LLHKAKQMGLSHIG-------LQVVPPLTVSETKGHNAIE 80 (211)
T ss_dssp HHHHHHHTTCCEET-------TEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcCeeC-------CeECCcHHHhHHHHHHHHH
Confidence 45677888876542 4578999999998877765
No 363
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=23.11 E-value=1.1e+02 Score=17.09 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=20.9
Q ss_pred HHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 37 KMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 37 ~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.+.+..++.+.. ++.+-+.-|-.-+.++...+.+.+.+.+.
T Consensus 67 ~~~~~~~~~R~~---~d~F~ill~~~~~~~~~~~~~~~l~~~~~ 107 (171)
T 3icl_A 67 AVRDGDTVARIG---GDKFTILLNGAKDTLNGALVAQKILDGLA 107 (171)
T ss_dssp HSCTTCEEEEET---TTEEEEEESSCTTSTTTHHHHHHHHHHHT
T ss_pred hcCCCCEEEEec---CCEEEEEecCCCChHHHHHHHHHHHHHhh
Confidence 333456777765 45554433333344445555555555543
No 364
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=23.04 E-value=56 Score=17.10 Aligned_cols=14 Identities=14% Similarity=0.178 Sum_probs=10.8
Q ss_pred ccCHHHHHHHHHHH
Q 042283 62 CFTKEDANYLVDVM 75 (82)
Q Consensus 62 ~i~~~eid~~~~~l 75 (82)
-+|++||++++...
T Consensus 46 GLt~eEI~~Al~ra 59 (70)
T 2w84_A 46 GLTDEEIDMAFQQS 59 (70)
T ss_dssp TCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHc
Confidence 46889999888764
No 365
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=23.02 E-value=68 Score=18.89 Aligned_cols=21 Identities=5% Similarity=-0.042 Sum_probs=15.2
Q ss_pred cCcccCHHHHHHHHHHHHHhH
Q 042283 59 PPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 59 PPL~i~~~eid~~~~~l~~~l 79 (82)
++-..++++++++.+.|+++|
T Consensus 141 ~~~~~~~~~l~~~~~~ir~~L 161 (161)
T 3lb5_A 141 NNIITPTEILEENAKKIRAAL 161 (161)
T ss_dssp ---CCCHHHHHHHHHHHHHHC
T ss_pred cccCCCHHHHHHHHHHHHHhC
Confidence 344578899999999998764
No 366
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=23.01 E-value=1.4e+02 Score=18.95 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=27.0
Q ss_pred HHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 33 DVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 33 ~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
...+.+.++|.++... .+++++++++.+.+++.++
T Consensus 26 e~~~~f~~dGyvvl~~-------------~l~~e~v~~l~~~~~~~~~ 60 (308)
T 2a1x_A 26 EQRKFYEENGFLVIKN-------------LVPDADIQRFRNEFEKICR 60 (308)
T ss_dssp THHHHHHHHSEEEETT-------------CSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEccC-------------CCCHHHHHHHHHHHHHHHh
Confidence 4556778889887642 5789999999999888764
No 367
>2nnu_A Regulatory protein E2; protein-peptide complex, helical peptide, three helix bundle, amphipathic helix, transcription; 1.59A {Human papillomavirus type 16} SCOP: b.91.1.1 PDB: 1dto_A
Probab=22.96 E-value=53 Score=20.77 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=25.0
Q ss_pred HHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 34 VMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 34 v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
+.-.++++|+.-.. +...|||.+|+....++|+
T Consensus 46 Lly~AR~~G~~~lG-------~q~VP~l~VSe~kAk~AIe 78 (205)
T 2nnu_A 46 IYYKAREMGFKHIN-------HQVVPTLAVSKNKALQAIE 78 (205)
T ss_dssp HHHHHHHTTCSEET-------TEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcCeeC-------CeECCcHHHhHHHHHHHHH
Confidence 45677888876542 4578999999998877765
No 368
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=22.66 E-value=71 Score=21.47 Aligned_cols=38 Identities=21% Similarity=0.134 Sum_probs=27.6
Q ss_pred cCceeeecC--CCCCEEEEecCcccCHHHHHHHHHHHHHh
Q 042283 41 MGVLIGKGG--FYGNVFRIAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 41 ~Gll~~~~g--~~~~~i~~~PPL~i~~~eid~~~~~l~~~ 78 (82)
-|++...+. ..--++|+.+|..+|.+++..+.++.++-
T Consensus 38 ~Gv~~~~~e~gd~~~~vRv~~p~~lt~~qlr~ladiA~ky 77 (366)
T 3mm5_B 38 PGVIKRVAESGDVIYVVRFGTPRLLSIYTVRELCDIADKY 77 (366)
T ss_dssp TTEEEEEETTSCEEEEEEECCCSEEEHHHHHHHHHHHHHH
T ss_pred CCEEEeeccCCCceEEEEECCccccCHHHHHHHHHHHHHh
Confidence 367766541 11237899999999999999998887763
No 369
>3ip4_C Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: a.137.12.1 PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=22.38 E-value=92 Score=16.96 Aligned_cols=20 Identities=10% Similarity=0.340 Sum_probs=15.2
Q ss_pred cccCHHHHHHHHHHHHHhHh
Q 042283 61 LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 61 L~i~~~eid~~~~~l~~~l~ 80 (82)
|-++++|++.+..-|.+.|.
T Consensus 18 L~l~eeE~~~~~~~l~~Il~ 37 (100)
T 3ip4_C 18 LQISPEETEEMANTLESILD 37 (100)
T ss_dssp CCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 56788888888887777653
No 370
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=22.35 E-value=81 Score=20.10 Aligned_cols=45 Identities=7% Similarity=0.127 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEecC--cccCHHHHHHHHHHHHHhHh
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAPP--LCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PP--L~i~~~eid~~~~~l~~~l~ 80 (82)
+....+++.|.+.||=... ++.+-. ..=+++|++.+++.+.+.|.
T Consensus 37 ~~~~~i~~~c~~lGI~~lT-------lYaFStENw~Rp~~EV~~Lm~L~~~~l~ 83 (225)
T 3ugs_B 37 KTMQKLMEVCMEENISNLS-------LFAFSTENWKRPKDEIDFIFELLDRCLD 83 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEE-------EEEEESGGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEE-------EEEEcccccCCCHHHHHHHHHHHHHHHH
Confidence 3456789999999984322 111111 22378999999999988774
No 371
>3h0g_D DNA-directed RNA polymerase II subunit RPB4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=22.27 E-value=37 Score=19.84 Aligned_cols=23 Identities=13% Similarity=0.339 Sum_probs=18.4
Q ss_pred EEecCcc--cCHHHHHHHHHHHHHh
Q 042283 56 RIAPPLC--FTKEDANYLVDVMDCS 78 (82)
Q Consensus 56 ~~~PPL~--i~~~eid~~~~~l~~~ 78 (82)
-+.|.|- +++++|+++++.+.+.
T Consensus 106 ~LIpsL~~r~~de~L~~IL~~l~~~ 130 (135)
T 3h0g_D 106 TLIPSLANKIDDQNLQGILDELSTL 130 (135)
T ss_dssp HHCGGGTTTSCSHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCHHHHHHHHHHHHHH
Confidence 3666665 7999999999998875
No 372
>2l3a_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; NMR {Streptococcus pneumoniae} PDB: 3obh_A*
Probab=22.06 E-value=33 Score=18.57 Aligned_cols=23 Identities=13% Similarity=0.364 Sum_probs=17.4
Q ss_pred EecCcccCHHHHHHHHHHHHHhH
Q 042283 57 IAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~~l 79 (82)
+.=-+++|++|+..+.++|.+-|
T Consensus 53 MGKGITLT~eE~~~L~~~L~~~~ 75 (82)
T 2l3a_A 53 MGKGITLSNEEFQTMVDAFKGNL 75 (82)
T ss_dssp CCCCEEECHHHHHHHHHHHHSSS
T ss_pred ccCcccccHHHHHHHHHHHHHHH
Confidence 33446899999999988887644
No 373
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=22.05 E-value=1.3e+02 Score=17.73 Aligned_cols=49 Identities=10% Similarity=0.103 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 28 KAETLDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 28 ~~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+..++++.+.+.++|+-+.........+- +++.+++.++++.+|.+.+.
T Consensus 109 ~Gv~arif~aLa~~~InI~~istSe~~Is----~vV~~~d~~~Av~~Lh~~F~ 157 (178)
T 2dtj_A 109 PGVTAEFMEALRDVNVNIELISTSEIRIS----VLIREDDLDAAARALHEQFQ 157 (178)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEETTEEE----EEEEGGGHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHCCCCEEEEEcCCCeEE----EEEeHHHHHHHHHHHHHHHc
Confidence 34678899999999986643222233332 45688999999999988774
No 374
>3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=21.93 E-value=64 Score=24.28 Aligned_cols=28 Identities=7% Similarity=0.076 Sum_probs=22.1
Q ss_pred EEEecC-cccCHHHHHHHHHHHHHhHhcC
Q 042283 55 FRIAPP-LCFTKEDANYLVDVMDCSMTKK 82 (82)
Q Consensus 55 i~~~PP-L~i~~~eid~~~~~l~~~l~~~ 82 (82)
+.|.++ =|+|++|++.+.+.+.+++.++
T Consensus 760 l~~r~~~rTLtdeev~~~~~ki~~~l~~~ 788 (795)
T 3pco_B 760 LILQDTSRTLEEEEIAATVAKCVEALKER 788 (795)
T ss_dssp EEECCSSCCCCHHHHHHHHHHHHHHTTTT
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 344444 7999999999999999888653
No 375
>1tue_B Regulatory protein E2; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: b.91.1.1
Probab=21.77 E-value=57 Score=20.82 Aligned_cols=33 Identities=12% Similarity=0.297 Sum_probs=25.0
Q ss_pred HHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 34 VMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 34 v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
+.-.++++|+.-.. +...|||.+|+....++|+
T Consensus 49 Lly~AR~~G~~~lG-------~q~VP~l~VSe~KAk~AIe 81 (218)
T 1tue_B 49 IFFAAREHGIQTLN-------HQVVPAYNISKSKAHKAIE 81 (218)
T ss_dssp HHHHHHHTTCSEET-------TEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcCeeC-------CeECCcHHHhHHHHHHHHH
Confidence 45677888876542 4578999999998887766
No 376
>2jex_A Regulatory protein E2; nuclear protein, DNA replication, phosphorylation, transcrip regulation, viral transcription factor; 2.35A {Bovine papillomavirus type 1} PDB: 2jeu_A
Probab=21.76 E-value=48 Score=21.01 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=25.0
Q ss_pred HHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHH
Q 042283 34 VMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVD 73 (82)
Q Consensus 34 v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~ 73 (82)
+.-.++++|+.-.. +...|||.+|++...++|+
T Consensus 42 Lly~AR~~G~~~lG-------~q~VP~l~VSe~kAk~AIe 74 (209)
T 2jex_A 42 LLYAARKKGVTVLG-------HCRVPHSVVCQERAKQAIE 74 (209)
T ss_dssp HHHHHHHTTCSEET-------TEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcCeeC-------CeECCcHHHhHHHHHHHHH
Confidence 45677888876542 4578999999998877765
No 377
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=21.64 E-value=65 Score=18.21 Aligned_cols=48 Identities=15% Similarity=0.187 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHcCcee---e---ecCCCC--------CEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 30 ETLDVMDKMKQMGVLI---G---KGGFYG--------NVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 30 ~~~~v~~~~~~~Gll~---~---~~g~~~--------~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
....+.+.+.+.|+-- . .+|.+. .-+++. .+.++++++.+++++.+++
T Consensus 36 k~e~V~~aL~~~Gi~G~TV~~V~G~G~q~~~t~~~~g~kv~Ie--iVv~de~ve~vv~~I~~~~ 97 (119)
T 2cz4_A 36 LEKRLVEEVKRLGAKGYTITPARGEGSRGIRSVDWEGQNIRLE--TIVSEEVALRILQRLQEEY 97 (119)
T ss_dssp GHHHHHHHHHHTTCCCCEEEEEBCTTCCCTTCSCSTTCEEEEE--EEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCcEEEcCCEEecCCCCccccccCCCEEEE--EEECHHHHHHHHHHHHHHh
Confidence 5677888888887622 1 122111 111111 5779999999999999554
No 378
>3hou_D DNA-directed RNA polymerase II subunit RPB4; RNA polymerase II, metal-binding, transcription bubble; HET: BRU; 3.20A {Saccharomyces cerevisiae} PDB: 1nt9_D 1y1w_D 1y1y_D 1y77_D* 2b63_D* 2b8k_D 2ja5_D* 2ja6_D* 2ja7_D* 2ja8_D* 2r7z_D 2r92_D 2r93_D 1y1v_D* 3fki_D 3h3v_E 2vum_D* 3hov_D* 3how_D* 3hox_D* ...
Probab=21.57 E-value=61 Score=20.74 Aligned_cols=24 Identities=8% Similarity=0.246 Sum_probs=19.6
Q ss_pred EEEecCcc--cCHHHHHHHHHHHHHh
Q 042283 55 FRIAPPLC--FTKEDANYLVDVMDCS 78 (82)
Q Consensus 55 i~~~PPL~--i~~~eid~~~~~l~~~ 78 (82)
--+.|.|- +++++++++++.|.+.
T Consensus 192 RALIPSL~~k~sDEeLqeILdeLsky 217 (221)
T 3hou_D 192 KTLIPSLNNKISDDELERILKELSNL 217 (221)
T ss_dssp HHHCTTCTTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccCCHHHHHHHHHHHHHh
Confidence 34777776 8999999999998864
No 379
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=21.46 E-value=1.5e+02 Score=19.14 Aligned_cols=36 Identities=14% Similarity=0.164 Sum_probs=27.9
Q ss_pred HHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 32 LDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 32 ~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
..-.+.+.++|.++... .+++++++++.+.+++.++
T Consensus 37 ~eqi~~f~~dGyvvi~~-------------~ls~eev~~lr~~i~~~~~ 72 (310)
T 3emr_A 37 KEQLDSYEKNGFLQIKN-------------FFSEDEVIDMQKAIFELQD 72 (310)
T ss_dssp HHHHHHHHHHSEEEETT-------------CSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEccC-------------CCCHHHHHHHHHHHHHHHh
Confidence 44567788889887653 5789999999999888765
No 380
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=21.46 E-value=80 Score=15.14 Aligned_cols=17 Identities=6% Similarity=-0.124 Sum_probs=13.5
Q ss_pred CcccCHHHHHHHHHHHH
Q 042283 60 PLCFTKEDANYLVDVMD 76 (82)
Q Consensus 60 PL~i~~~eid~~~~~l~ 76 (82)
|..+|+++|.+++....
T Consensus 8 p~~~t~~~l~~~F~~~G 24 (75)
T 1iqt_A 8 SPDTPEEKIREYFGGFG 24 (75)
T ss_dssp CSSCCHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHhcC
Confidence 66789999998887653
No 381
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=21.37 E-value=1.9e+02 Score=19.80 Aligned_cols=38 Identities=26% Similarity=0.314 Sum_probs=27.3
Q ss_pred ceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHhcC
Q 042283 43 VLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMTKK 82 (82)
Q Consensus 43 ll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~~~ 82 (82)
+++|++|+ ...+|+.== .-++++++++.+.+.+.+.+|
T Consensus 418 ~lvRpSgT-EP~irvy~E-a~~~~~~~~~~~~~~~~i~~~ 455 (455)
T 2f7l_A 418 FLVRKSGT-EPIIRIMAE-AKDENVANNLVNELKKIVEGK 455 (455)
T ss_dssp EEEEECSS-SSEEEEEEE-ESSHHHHHHHHHHHHHHHTTC
T ss_pred EEEeeCCC-CcEEEEEEE-ECCHHHHHHHHHHHHHHHhcC
Confidence 46777774 456666521 247899999999999988765
No 382
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=21.35 E-value=92 Score=17.11 Aligned_cols=23 Identities=13% Similarity=0.209 Sum_probs=18.1
Q ss_pred ecCcccCHHHHHHHHHHHHHhHh
Q 042283 58 APPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 58 ~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
.|.-.+|+++.+++++..+++++
T Consensus 99 ~p~~~~t~e~a~~~l~~a~~v~~ 121 (127)
T 1ufb_A 99 PAARHYTRLEAEEALDLAQKILA 121 (127)
T ss_dssp CGGGGCCHHHHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHHHHHH
Confidence 44458999999999998877764
No 383
>2fho_A Spliceosomal protein SF3B155; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.22 E-value=19 Score=17.47 Aligned_cols=10 Identities=10% Similarity=0.401 Sum_probs=7.4
Q ss_pred cCHHHHHHHH
Q 042283 63 FTKEDANYLV 72 (82)
Q Consensus 63 i~~~eid~~~ 72 (82)
+|+||+|.++
T Consensus 22 ltDEeLD~~L 31 (47)
T 2fho_A 22 LSDEELDAMF 31 (47)
T ss_dssp SCTTHHHHHS
T ss_pred CCHHHHHHhC
Confidence 5788888764
No 384
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A*
Probab=21.10 E-value=1.7e+02 Score=18.72 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=26.0
Q ss_pred HHHHHHHHHHcCce-eeecCCC--CCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 31 TLDVMDKMKQMGVL-IGKGGFY--GNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 31 ~~~v~~~~~~~Gll-~~~~g~~--~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
...+++.+.+.|.+ .+.+|.. +.++-+.|+ ++.+++.+.+.+.+
T Consensus 283 l~~l~~~~~~~Ga~ga~lsGaG~G~~v~~l~~~-----~~~~~~~~~l~~~~ 329 (350)
T 2cz9_A 283 LDFFVERALKLGAYGARLTGAGFGGSAIALVDK-----EDAETIGEEILREY 329 (350)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCSSSEEEEEEEG-----GGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCceEEEEEEch-----hhHHHHHHHHHHHH
Confidence 35677788888864 4445433 566777775 23455555555544
No 385
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=20.76 E-value=96 Score=23.92 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=22.6
Q ss_pred EEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 54 VFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 54 ~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
.++++=|++-|.+|+.++.+.++++.
T Consensus 725 ~~~IMiPmV~t~~E~~~~~~~i~~~~ 750 (913)
T 1h6z_A 725 IPEIMVPLVGKKEELSLIREEVVKTA 750 (913)
T ss_dssp CEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHHHHHHHHHH
Confidence 47889999999999999999887764
No 386
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=20.64 E-value=88 Score=17.48 Aligned_cols=29 Identities=14% Similarity=0.375 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHcCceeeecCCCCCEEEEec
Q 042283 29 AETLDVMDKMKQMGVLIGKGGFYGNVFRIAP 59 (82)
Q Consensus 29 ~~~~~v~~~~~~~Gll~~~~g~~~~~i~~~P 59 (82)
.....+++.+.+.|++.+... ++..++.|
T Consensus 43 ~Tvt~~l~rLe~kGlv~r~~~--~r~~~~~~ 71 (138)
T 2g9w_A 43 TTVMAVLQRLAKKNLVLQIRD--DRAHRYAP 71 (138)
T ss_dssp HHHHHHHHHHHHTTSEEEEC-----CCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEec--CCeEEEEe
Confidence 356778899999999988642 34444444
No 387
>1e29_A Cytochrome C549; electron transport, PSII associated cytochrome, low potential, BIS_histidinyl, PSII modulator; HET: HEC; 1.21A {Synechocystis SP} SCOP: a.3.1.1
Probab=20.44 E-value=82 Score=17.71 Aligned_cols=20 Identities=15% Similarity=0.179 Sum_probs=15.0
Q ss_pred ecCc-ccCHHHHHHHHHHHHH
Q 042283 58 APPL-CFTKEDANYLVDVMDC 77 (82)
Q Consensus 58 ~PPL-~i~~~eid~~~~~l~~ 77 (82)
+|.+ .+|++|++.++.-|..
T Consensus 101 mp~~~~Lsd~ei~~laaYl~~ 121 (135)
T 1e29_A 101 YPEMRNYTEDDIFDVAGYTLI 121 (135)
T ss_dssp CGGGTTCCHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHHHHHHh
Confidence 4444 5899999999887653
No 388
>3pyw_A S-layer protein SAP; SLH-domains, polysaccharide binding, GST-SLH, cell WALL, STR genomics, PSI-biology, protein structure initiative; 1.80A {Bacillus anthracis}
Probab=20.43 E-value=1.3e+02 Score=18.04 Aligned_cols=42 Identities=19% Similarity=0.393 Sum_probs=32.1
Q ss_pred HHHHHHHHHcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhH
Q 042283 32 LDVMDKMKQMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSM 79 (82)
Q Consensus 32 ~~v~~~~~~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l 79 (82)
..-+..+.+.|++... ++ .|.|==.+|++|+-.++..+.+.+
T Consensus 137 ~~~v~~~~~~Gi~~g~----~~--~f~P~~~iTRaE~A~~l~r~l~~~ 178 (203)
T 3pyw_A 137 KEKANILVELGISVGT----GD--QWEPKKTVTKAEAAQFIAKTDKQF 178 (203)
T ss_dssp HHHHHHHHHTTCSCCC----SS--CCCTTSBCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCEeCC----CC--CcCCCCCCcHHHHHHHHHHHHHHh
Confidence 3456678888987643 24 599999999999999988876654
No 389
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=20.43 E-value=1.1e+02 Score=17.93 Aligned_cols=21 Identities=10% Similarity=0.298 Sum_probs=17.8
Q ss_pred CcccCHHHHHHHHHHHHHhHh
Q 042283 60 PLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 60 PL~i~~~eid~~~~~l~~~l~ 80 (82)
+-..++++++++.+.|+++|.
T Consensus 119 ~~~~~~eel~~~a~~Ir~~L~ 139 (149)
T 3i4s_A 119 PLAHDATEVQNFISALRRKIW 139 (149)
T ss_dssp CCCCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHh
Confidence 456789999999999999875
No 390
>1nz8_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: d.58.42.1
Probab=20.23 E-value=81 Score=17.48 Aligned_cols=16 Identities=13% Similarity=0.461 Sum_probs=14.0
Q ss_pred CcccCHHHHHHHHHHH
Q 042283 60 PLCFTKEDANYLVDVM 75 (82)
Q Consensus 60 PL~i~~~eid~~~~~l 75 (82)
|..++++|++.++..+
T Consensus 100 P~pi~~~ev~~i~~~~ 115 (119)
T 1nz8_A 100 PVPLSPDEVRHILEVS 115 (119)
T ss_dssp SCBCCHHHHHHHHHHH
T ss_pred EeECCHHHHHHHHHHH
Confidence 7889999999998765
No 391
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=20.11 E-value=2e+02 Score=19.11 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=24.5
Q ss_pred HcCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHHhHh
Q 042283 40 QMGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDCSMT 80 (82)
Q Consensus 40 ~~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~~l~ 80 (82)
+..++.+.+| ..-+.++|. .+.++...+.+.+.+.+.
T Consensus 359 ~~d~~~R~gg--deF~il~~~--~~~~~~~~~~~~i~~~~~ 395 (459)
T 1w25_A 359 AIDLPCRYGG--EEFVVIMPD--TALADALRIAERIRMHVS 395 (459)
T ss_dssp TTSEEEECSS--SEEEEEETT--CCHHHHHHHHHHHHHHHH
T ss_pred CcCEEEEEcC--ceEEEEeCC--CCHHHHHHHHHHHHHHHH
Confidence 4567777653 344455665 477888888888877664
No 392
>2d0w_A Cytochrome CL; electron transfer, electron transport; HET: HEM; 1.98A {Hyphomicrobium denitrificans}
Probab=20.07 E-value=92 Score=18.22 Aligned_cols=21 Identities=10% Similarity=0.128 Sum_probs=16.9
Q ss_pred EecCcc--cCHHHHHHHHHHHHH
Q 042283 57 IAPPLC--FTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL~--i~~~eid~~~~~l~~ 77 (82)
.+||+- +|++|+..++.-|..
T Consensus 102 ~Mp~~~~~Ls~~ei~~l~aYl~s 124 (170)
T 2d0w_A 102 MMGPHGQDLELDNMLKLIAWIRH 124 (170)
T ss_dssp TCCCCTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHH
Confidence 578874 899999999887764
No 393
>4g06_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium (NESG); HET: DT; 2.90A {Streptococcus pneumoniae}
Probab=20.04 E-value=77 Score=16.96 Aligned_cols=21 Identities=14% Similarity=0.340 Sum_probs=15.7
Q ss_pred EecCcccCHHHHHHHHHHHHH
Q 042283 57 IAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~ 77 (82)
+.==+++|++|+..+.++|..
T Consensus 58 MgKGITLT~eE~~~L~~~L~~ 78 (79)
T 4g06_A 58 MGKGITLSNEEFQTMVDAFKG 78 (79)
T ss_dssp BCCCEEECHHHHHHHHHHHHH
T ss_pred ccCccccCHHHHHHHHHHHcc
Confidence 333478899999998888753
No 394
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=20.02 E-value=71 Score=17.31 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=30.2
Q ss_pred ceEEEEEeeeCCCCc-hHHHHHHHHHHHH---cCceeeecCCCCCEEEEecCcccCHHHHHHHHHHHHH
Q 042283 13 GFMLGVEFVTDSQLR-KAETLDVMDKMKQ---MGVLIGKGGFYGNVFRIAPPLCFTKEDANYLVDVMDC 77 (82)
Q Consensus 13 Glm~gie~~~~~~~~-~~~~~~v~~~~~~---~Gll~~~~g~~~~~i~~~PPL~i~~~eid~~~~~l~~ 77 (82)
|=...+.+..+ .. .+...++...|.- ..+.+..---.++ |.-+.|++|+++++...+.
T Consensus 15 gdi~~~~v~~~--i~~~~L~~kv~~~~~~~~~~~f~lky~DEeGD-----~itisSd~EL~eAl~l~~~ 76 (89)
T 1vd2_A 15 GDIMITHFEPS--ISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGD-----PCTVSSQLELEEAFRLYEL 76 (89)
T ss_dssp SCEEEEEECTT--CCHHHHHHHHHHHTTCCSSCCEEEEECCSSSC-----CEECCSHHHHHHHHHHHHH
T ss_pred CeEEEEECCCC--CCHHHHHHHHHHHhCCCCCCeEEEEEECCCCC-----cccccCHHHHHHHHHHHHc
Confidence 44555555332 22 3445556655541 2233332211233 3346799999999987654
No 395
>1rxq_A YFIT; nickel-binding, hydrolase, helix-bundle, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Bacillus subtilis} SCOP: a.213.1.1
Probab=20.01 E-value=83 Score=17.86 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=17.7
Q ss_pred EecCcccCHHHHHHHHHHHHHh
Q 042283 57 IAPPLCFTKEDANYLVDVMDCS 78 (82)
Q Consensus 57 ~~PPL~i~~~eid~~~~~l~~~ 78 (82)
|.+|-.+|.++++.+++.++..
T Consensus 13 ~~~~~~~~~~~~~~l~~~l~~~ 34 (178)
T 1rxq_A 13 YKPRESISKEQKDKWIQVLEEV 34 (178)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHH
Confidence 6688899999999888776654
Done!