Query 042284
Match_columns 430
No_of_seqs 494 out of 2948
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 07:45:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2goy_A Adenosine phosphosulfat 100.0 2.5E-58 8.4E-63 439.8 19.0 238 45-287 26-265 (275)
2 2oq2_A Phosphoadenosine phosph 100.0 2.4E-55 8.1E-60 416.1 20.1 224 46-282 14-249 (261)
3 2o8v_A Phosphoadenosine phosph 100.0 5.3E-54 1.8E-58 405.0 19.6 226 44-285 16-246 (252)
4 3fwk_A FMN adenylyltransferase 100.0 3.8E-47 1.3E-51 359.7 10.4 204 18-257 5-236 (308)
5 1zun_A Sulfate adenylyltransfe 100.0 8E-41 2.7E-45 324.9 16.9 201 59-268 33-307 (325)
6 2wsi_A FAD synthetase; transfe 100.0 2.8E-41 9.7E-46 325.8 8.5 220 19-272 2-251 (306)
7 1sur_A PAPS reductase; assimil 100.0 2.8E-39 9.4E-44 297.8 19.6 195 45-252 16-215 (215)
8 3zzx_A Thioredoxin; oxidoreduc 99.9 3.6E-21 1.2E-25 156.2 13.5 103 320-430 2-105 (105)
9 3h79_A Thioredoxin-like protei 99.8 3.7E-20 1.3E-24 155.1 15.4 108 317-429 14-126 (127)
10 2av4_A Thioredoxin-like protei 99.8 4.6E-20 1.6E-24 157.7 11.7 106 319-429 22-137 (160)
11 2qsi_A Putative hydrogenase ex 99.8 3.3E-20 1.1E-24 156.1 10.2 105 318-429 15-121 (137)
12 2qgv_A Hydrogenase-1 operon pr 99.8 2.5E-20 8.5E-25 157.4 7.0 103 319-429 18-123 (140)
13 3gnj_A Thioredoxin domain prot 99.8 5.4E-19 1.8E-23 143.7 13.8 105 318-429 4-108 (111)
14 3ga4_A Dolichyl-diphosphooligo 99.8 6.2E-19 2.1E-23 155.5 14.2 108 317-428 17-150 (178)
15 2dml_A Protein disulfide-isome 99.8 7.9E-19 2.7E-23 147.2 14.1 112 312-429 10-122 (130)
16 3tco_A Thioredoxin (TRXA-1); d 99.8 9.6E-19 3.3E-23 141.5 13.4 104 318-429 4-107 (109)
17 2dj1_A Protein disulfide-isome 99.8 1.1E-18 3.6E-23 148.4 13.7 104 318-429 17-122 (140)
18 2trx_A Thioredoxin; electron t 99.8 1.7E-18 5.7E-23 140.2 13.5 105 318-429 2-106 (108)
19 3die_A Thioredoxin, TRX; elect 99.8 1.7E-18 5.8E-23 139.4 13.1 103 318-429 3-105 (106)
20 3hxs_A Thioredoxin, TRXP; elec 99.8 1.3E-18 4.5E-23 148.1 13.0 109 316-429 20-137 (141)
21 2i4a_A Thioredoxin; acidophIle 99.8 2.8E-18 9.6E-23 138.4 14.0 106 318-430 2-107 (107)
22 1nsw_A Thioredoxin, TRX; therm 99.8 1.7E-18 5.8E-23 139.4 12.2 102 320-429 2-103 (105)
23 1x5d_A Protein disulfide-isome 99.8 2.1E-18 7.1E-23 145.1 13.1 105 318-429 7-115 (133)
24 3uvt_A Thioredoxin domain-cont 99.8 2.9E-18 1E-22 139.2 13.3 104 318-429 5-110 (111)
25 2voc_A Thioredoxin; electron t 99.8 1.8E-18 6.1E-23 141.5 12.1 102 319-429 2-103 (112)
26 1x5e_A Thioredoxin domain cont 99.8 3E-18 1E-22 143.1 13.4 102 318-429 7-108 (126)
27 1r26_A Thioredoxin; redox-acti 99.8 3.5E-18 1.2E-22 143.0 13.8 103 317-429 18-121 (125)
28 2yzu_A Thioredoxin; redox prot 99.8 3.4E-18 1.2E-22 138.1 13.4 103 319-429 2-104 (109)
29 3qfa_C Thioredoxin; protein-pr 99.8 1.5E-18 5.2E-23 143.0 11.0 104 318-429 12-115 (116)
30 3p2a_A Thioredoxin 2, putative 99.8 4.7E-18 1.6E-22 146.1 14.5 104 318-429 38-141 (148)
31 1t00_A Thioredoxin, TRX; redox 99.8 4.9E-18 1.7E-22 138.4 13.8 106 317-429 4-109 (112)
32 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.8E-18 6.2E-23 147.5 11.7 106 317-429 5-110 (140)
33 2ppt_A Thioredoxin-2; thiredox 99.8 3.5E-18 1.2E-22 148.5 13.5 104 318-429 47-150 (155)
34 1w4v_A Thioredoxin, mitochondr 99.8 4.1E-18 1.4E-22 141.0 12.9 106 317-429 12-117 (119)
35 2l5l_A Thioredoxin; structural 99.8 4.6E-18 1.6E-22 144.2 13.3 106 318-429 9-124 (136)
36 1dby_A Chloroplast thioredoxin 99.8 4.7E-18 1.6E-22 137.3 12.6 104 319-429 2-105 (107)
37 3f3q_A Thioredoxin-1; His TAG, 99.8 6.1E-18 2.1E-22 137.7 13.3 101 319-429 8-108 (109)
38 3d6i_A Monothiol glutaredoxin- 99.8 5.3E-18 1.8E-22 138.3 13.0 106 319-429 1-107 (112)
39 2o8v_B Thioredoxin 1; disulfid 99.8 3.3E-18 1.1E-22 143.7 11.9 106 317-429 21-126 (128)
40 2pu9_C TRX-F, thioredoxin F-ty 99.8 6.7E-18 2.3E-22 137.6 13.3 104 318-429 5-109 (111)
41 1thx_A Thioredoxin, thioredoxi 99.8 9E-18 3.1E-22 137.2 13.6 105 318-429 7-111 (115)
42 1fb6_A Thioredoxin M; electron 99.8 8.1E-18 2.8E-22 135.2 12.8 103 320-429 2-104 (105)
43 3aps_A DNAJ homolog subfamily 99.8 4.9E-18 1.7E-22 140.7 11.8 106 318-429 3-111 (122)
44 2e0q_A Thioredoxin; electron t 99.8 8.2E-18 2.8E-22 134.5 12.7 101 320-429 1-101 (104)
45 1gh2_A Thioredoxin-like protei 99.8 1.2E-17 4.1E-22 135.2 13.5 102 320-429 3-105 (107)
46 4euy_A Uncharacterized protein 99.7 9.7E-19 3.3E-23 141.3 6.7 97 324-429 7-103 (105)
47 3evi_A Phosducin-like protein 99.7 4.2E-18 1.4E-22 140.9 10.3 104 318-429 3-112 (118)
48 1mek_A Protein disulfide isome 99.7 2.8E-18 9.5E-23 141.1 9.0 106 318-429 7-115 (120)
49 1ep7_A Thioredoxin CH1, H-type 99.7 1.1E-17 3.9E-22 136.2 12.2 105 319-429 3-109 (112)
50 3idv_A Protein disulfide-isome 99.7 1.3E-17 4.4E-22 154.8 14.0 106 316-429 13-120 (241)
51 1syr_A Thioredoxin; SGPP, stru 99.7 1.2E-17 4.3E-22 136.4 12.1 102 318-429 9-110 (112)
52 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.4E-17 4.6E-22 137.6 12.5 105 318-429 12-116 (121)
53 2dj3_A Protein disulfide-isome 99.7 1.9E-18 6.6E-23 145.4 7.3 108 318-429 7-116 (133)
54 3qou_A Protein YBBN; thioredox 99.7 9.4E-18 3.2E-22 160.3 12.4 107 317-429 6-112 (287)
55 1faa_A Thioredoxin F; electron 99.7 2.2E-17 7.4E-22 137.3 12.9 105 318-430 18-123 (124)
56 1xwb_A Thioredoxin; dimerizati 99.7 2.9E-17 1E-21 132.1 12.8 103 320-429 2-105 (106)
57 3ed3_A Protein disulfide-isome 99.7 3.5E-17 1.2E-21 157.5 15.6 108 316-429 15-140 (298)
58 3m9j_A Thioredoxin; oxidoreduc 99.7 3.1E-17 1.1E-21 131.8 12.8 101 321-429 3-104 (105)
59 3gix_A Thioredoxin-like protei 99.7 1.7E-17 5.7E-22 143.2 11.7 103 323-429 9-119 (149)
60 2vim_A Thioredoxin, TRX; thior 99.7 5.3E-17 1.8E-21 130.1 13.4 102 320-429 1-103 (104)
61 1xfl_A Thioredoxin H1; AT3G510 99.7 4.3E-17 1.5E-21 136.0 13.3 105 318-429 16-122 (124)
62 3apq_A DNAJ homolog subfamily 99.7 4.5E-17 1.5E-21 148.6 14.4 104 318-429 97-200 (210)
63 2djj_A PDI, protein disulfide- 99.7 1.3E-17 4.5E-22 137.8 9.8 105 317-429 6-115 (121)
64 2oe3_A Thioredoxin-3; electron 99.7 2.2E-17 7.6E-22 135.6 11.1 101 319-429 13-114 (114)
65 2xc2_A Thioredoxinn; oxidoredu 99.7 4.4E-17 1.5E-21 134.1 12.9 102 319-429 14-116 (117)
66 1oaz_A Thioredoxin 1; immune s 99.7 5.6E-18 1.9E-22 141.2 7.0 105 318-429 3-121 (123)
67 3us3_A Calsequestrin-1; calciu 99.7 4.7E-17 1.6E-21 161.2 14.7 106 316-429 11-122 (367)
68 2dj0_A Thioredoxin-related tra 99.7 2.5E-18 8.5E-23 146.0 4.6 104 318-426 7-116 (137)
69 2vlu_A Thioredoxin, thioredoxi 99.7 6.5E-17 2.2E-21 133.9 12.8 105 318-429 13-118 (122)
70 1v98_A Thioredoxin; oxidoreduc 99.7 4.9E-17 1.7E-21 138.4 12.3 104 318-429 33-136 (140)
71 2r2j_A Thioredoxin domain-cont 99.7 3E-17 1E-21 163.5 12.7 106 318-429 5-115 (382)
72 3ul3_B Thioredoxin, thioredoxi 99.7 1.4E-17 4.9E-22 139.5 8.7 88 336-428 40-127 (128)
73 2wz9_A Glutaredoxin-3; protein 99.7 6.3E-17 2.1E-21 140.1 13.0 104 318-429 12-116 (153)
74 3dxb_A Thioredoxin N-terminall 99.7 4.9E-17 1.7E-21 149.7 13.0 105 318-429 12-116 (222)
75 2b5e_A Protein disulfide-isome 99.7 9.8E-17 3.4E-21 165.5 16.6 107 317-429 13-120 (504)
76 2l6c_A Thioredoxin; oxidoreduc 99.7 3.2E-17 1.1E-21 133.6 10.1 101 319-429 4-104 (110)
77 1qgv_A Spliceosomal protein U5 99.7 6.4E-17 2.2E-21 138.4 11.9 101 324-429 10-119 (142)
78 2j23_A Thioredoxin; immune pro 99.7 3.8E-17 1.3E-21 135.5 10.1 104 318-429 15-119 (121)
79 1zma_A Bacterocin transport ac 99.7 3.2E-17 1.1E-21 135.2 8.6 102 318-428 12-118 (118)
80 3cxg_A Putative thioredoxin; m 99.7 2E-17 7E-22 139.8 7.4 106 316-429 18-127 (133)
81 1sji_A Calsequestrin 2, calseq 99.7 5.4E-17 1.9E-21 159.7 11.5 104 317-429 10-120 (350)
82 3d22_A TRXH4, thioredoxin H-ty 99.7 1.3E-16 4.6E-21 135.3 12.3 105 318-429 24-130 (139)
83 2dbc_A PDCL2, unnamed protein 99.7 1.2E-16 4E-21 135.5 11.8 104 318-429 10-119 (135)
84 1ti3_A Thioredoxin H, PTTRXH1; 99.7 9.1E-17 3.1E-21 130.8 10.8 105 318-429 4-110 (113)
85 3q6o_A Sulfhydryl oxidase 1; p 99.7 2.3E-16 7.9E-21 147.2 14.8 106 318-429 12-125 (244)
86 2f51_A Thioredoxin; electron t 99.7 1.9E-16 6.4E-21 130.8 12.7 103 318-429 3-111 (118)
87 3idv_A Protein disulfide-isome 99.7 6.6E-17 2.3E-21 149.9 10.9 104 318-429 130-235 (241)
88 3emx_A Thioredoxin; structural 99.7 3E-17 1E-21 139.0 7.8 101 317-429 15-124 (135)
89 2l57_A Uncharacterized protein 99.7 6.6E-17 2.3E-21 134.8 9.4 106 319-429 5-115 (126)
90 2vm1_A Thioredoxin, thioredoxi 99.7 2.4E-16 8.2E-21 129.4 12.4 105 318-429 6-112 (118)
91 3f8u_A Protein disulfide-isome 99.7 1.5E-16 5.2E-21 163.1 13.0 106 319-429 2-107 (481)
92 2es7_A Q8ZP25_salty, putative 99.7 3.4E-17 1.2E-21 140.1 6.7 102 319-429 18-123 (142)
93 2c0g_A ERP29 homolog, windbeut 99.7 8.2E-16 2.8E-20 143.2 14.6 103 316-429 14-130 (248)
94 3uem_A Protein disulfide-isome 99.6 1.2E-15 4.1E-20 150.5 14.1 111 312-429 243-355 (361)
95 3fk8_A Disulphide isomerase; A 99.6 1.6E-15 5.5E-20 127.6 11.0 100 326-429 16-131 (133)
96 2qc7_A ERP31, ERP28, endoplasm 99.6 3.6E-15 1.2E-19 138.3 14.2 102 318-429 5-117 (240)
97 2yj7_A LPBCA thioredoxin; oxid 99.4 3E-17 1E-21 131.7 0.0 104 319-429 2-105 (106)
98 1a8l_A Protein disulfide oxido 99.6 2.1E-15 7.1E-20 138.6 11.9 103 320-429 118-224 (226)
99 1wou_A Thioredoxin -related pr 99.6 1.2E-15 4.2E-20 126.9 9.4 103 319-428 6-122 (123)
100 2djk_A PDI, protein disulfide- 99.6 2.1E-15 7.2E-20 127.3 10.9 102 318-429 6-113 (133)
101 2trc_P Phosducin, MEKA, PP33; 99.6 4.8E-16 1.6E-20 142.5 7.3 105 318-429 99-211 (217)
102 2kuc_A Putative disulphide-iso 99.6 1.5E-15 5.2E-20 127.0 9.7 106 320-429 8-119 (130)
103 3t58_A Sulfhydryl oxidase 1; o 99.6 5.1E-15 1.8E-19 152.4 15.3 112 313-429 6-125 (519)
104 2fwh_A Thiol:disulfide interch 99.6 2.7E-15 9.1E-20 126.7 10.9 101 324-429 18-126 (134)
105 3iv4_A Putative oxidoreductase 99.6 1.8E-15 6.1E-20 122.2 9.2 99 319-426 7-111 (112)
106 1a0r_P Phosducin, MEKA, PP33; 99.6 2.2E-15 7.6E-20 140.1 9.3 106 318-429 112-224 (245)
107 2ywm_A Glutaredoxin-like prote 99.6 1.9E-15 6.4E-20 139.4 8.7 141 275-429 64-218 (229)
108 3f8u_A Protein disulfide-isome 99.6 9.9E-15 3.4E-19 149.5 14.8 108 316-429 350-459 (481)
109 3apo_A DNAJ homolog subfamily 99.6 3.9E-15 1.3E-19 161.5 11.5 104 318-429 116-219 (780)
110 1wmj_A Thioredoxin H-type; str 99.6 4.5E-16 1.5E-20 130.1 1.6 105 318-429 14-120 (130)
111 1fo5_A Thioredoxin; disulfide 99.6 5.3E-15 1.8E-19 113.9 7.2 82 339-429 3-84 (85)
112 3qcp_A QSOX from trypanosoma b 99.6 1.2E-15 4E-20 153.7 4.4 95 317-414 22-124 (470)
113 1nho_A Probable thioredoxin; b 99.5 5.6E-15 1.9E-19 113.8 6.7 81 340-429 3-83 (85)
114 2b5e_A Protein disulfide-isome 99.5 3.3E-14 1.1E-18 146.5 14.2 106 317-429 357-465 (504)
115 3f9u_A Putative exported cytoc 99.5 1.6E-14 5.6E-19 127.0 9.6 105 320-429 28-164 (172)
116 3apo_A DNAJ homolog subfamily 99.5 5.4E-14 1.8E-18 152.5 12.4 140 284-429 506-654 (780)
117 3dml_A Putative uncharacterize 99.5 2.3E-14 7.8E-19 117.2 5.8 87 337-429 17-108 (116)
118 2ju5_A Thioredoxin disulfide i 99.5 1.7E-13 5.8E-18 118.5 11.1 99 326-429 34-150 (154)
119 2lst_A Thioredoxin; structural 99.2 3.6E-15 1.2E-19 124.8 0.0 90 336-429 17-114 (130)
120 1z6n_A Hypothetical protein PA 99.5 5.3E-14 1.8E-18 123.4 6.6 82 320-407 38-122 (167)
121 2ywb_A GMP synthase [glutamine 99.4 2E-13 6.9E-18 140.2 11.1 177 65-247 200-383 (503)
122 2hls_A Protein disulfide oxido 99.4 4.4E-13 1.5E-17 124.9 12.1 96 324-429 126-224 (243)
123 1sen_A Thioredoxin-like protei 99.4 6.2E-14 2.1E-18 122.7 5.8 97 326-429 37-146 (164)
124 3kp8_A Vkorc1/thioredoxin doma 99.4 3.9E-14 1.3E-18 114.7 4.2 74 338-427 12-91 (106)
125 3raz_A Thioredoxin-related pro 99.4 6.8E-13 2.3E-17 113.8 12.3 91 337-429 23-138 (151)
126 1lu4_A Soluble secreted antige 99.4 4.6E-13 1.6E-17 112.1 10.7 87 337-429 23-134 (136)
127 2b5x_A YKUV protein, TRXY; thi 99.4 1.4E-12 4.7E-17 110.7 13.7 102 321-429 15-143 (148)
128 2dpl_A GMP synthetase, GMP syn 99.4 5.8E-13 2E-17 128.3 12.1 163 74-245 21-188 (308)
129 1wy5_A TILS, hypothetical UPF0 99.4 1.3E-12 4.6E-17 126.4 14.7 154 74-239 25-190 (317)
130 3ph9_A Anterior gradient prote 99.4 6.6E-14 2.3E-18 120.6 4.6 68 336-407 42-113 (151)
131 3ira_A Conserved protein; meth 99.4 2E-13 6.9E-18 120.0 7.6 78 323-406 27-116 (173)
132 3or5_A Thiol:disulfide interch 99.4 1E-12 3.5E-17 114.0 12.0 90 337-429 33-149 (165)
133 1ilo_A Conserved hypothetical 99.4 4.3E-13 1.5E-17 101.2 8.5 74 341-426 2-76 (77)
134 1a8l_A Protein disulfide oxido 99.4 3.6E-13 1.2E-17 123.5 9.6 99 325-428 9-110 (226)
135 3erw_A Sporulation thiol-disul 99.4 8.6E-13 2.9E-17 111.6 10.3 88 337-427 33-145 (145)
136 1zzo_A RV1677; thioredoxin fol 99.4 1E-12 3.4E-17 109.8 10.3 87 337-429 24-133 (136)
137 2f9s_A Thiol-disulfide oxidore 99.4 1.7E-12 6E-17 111.0 11.9 91 337-429 25-136 (151)
138 2ywm_A Glutaredoxin-like prote 99.4 1E-12 3.4E-17 121.0 10.6 98 326-429 9-113 (229)
139 2h30_A Thioredoxin, peptide me 99.4 5.2E-13 1.8E-17 115.8 8.2 105 319-429 22-154 (164)
140 2lja_A Putative thiol-disulfid 99.4 2.4E-12 8.3E-17 110.1 10.5 89 337-429 29-141 (152)
141 3lor_A Thiol-disulfide isomera 99.4 3.6E-12 1.2E-16 110.0 11.6 90 337-429 29-153 (160)
142 3eyt_A Uncharacterized protein 99.4 4E-12 1.4E-16 109.6 11.4 90 337-429 27-150 (158)
143 4evm_A Thioredoxin family prot 99.4 4.6E-12 1.6E-16 105.6 11.4 90 337-430 21-138 (138)
144 3hcz_A Possible thiol-disulfid 99.3 2.4E-12 8.1E-17 109.3 8.5 89 337-428 30-143 (148)
145 2l5o_A Putative thioredoxin; s 99.3 6.1E-12 2.1E-16 107.7 11.1 90 337-429 27-139 (153)
146 2fgx_A Putative thioredoxin; N 99.3 2.3E-12 7.9E-17 103.8 7.8 78 339-426 29-106 (107)
147 3eur_A Uncharacterized protein 99.3 5E-12 1.7E-16 107.2 10.1 86 337-428 30-142 (142)
148 3hdc_A Thioredoxin family prot 99.3 8.2E-12 2.8E-16 107.9 11.4 91 337-429 40-150 (158)
149 3ewl_A Uncharacterized conserv 99.3 6.3E-12 2.2E-16 106.3 10.3 87 337-429 26-139 (142)
150 3fkf_A Thiol-disulfide oxidore 99.3 7.7E-12 2.6E-16 106.1 10.9 88 337-429 32-144 (148)
151 2lrn_A Thiol:disulfide interch 99.3 7.6E-12 2.6E-16 107.3 10.8 88 337-429 28-139 (152)
152 3gl3_A Putative thiol:disulfid 99.3 1.1E-11 3.8E-16 105.9 11.7 91 337-429 27-140 (152)
153 1ttz_A Conserved hypothetical 99.3 3.4E-12 1.2E-16 99.2 6.9 73 342-429 3-75 (87)
154 3lwa_A Secreted thiol-disulfid 99.3 1.8E-11 6.1E-16 108.5 11.7 90 337-429 58-179 (183)
155 2lrt_A Uncharacterized protein 99.3 2.2E-11 7.6E-16 104.7 11.8 86 337-425 34-142 (152)
156 3ia1_A THIO-disulfide isomeras 99.3 1.5E-11 5.1E-16 105.4 10.6 85 339-429 31-142 (154)
157 3k32_A Uncharacterized protein 99.3 4.4E-12 1.5E-16 114.9 7.0 144 74-237 7-156 (203)
158 3bl5_A Queuosine biosynthesis 99.3 8.8E-12 3E-16 114.0 8.6 176 74-255 4-200 (219)
159 3kcm_A Thioredoxin family prot 99.3 2.5E-11 8.6E-16 103.9 10.7 92 337-429 27-141 (154)
160 3uem_A Protein disulfide-isome 99.2 2.9E-11 1E-15 118.9 11.8 106 318-429 117-228 (361)
161 3ha9_A Uncharacterized thiored 99.2 4.1E-11 1.4E-15 104.1 11.1 87 337-429 36-162 (165)
162 1i5g_A Tryparedoxin II; electr 99.2 2.9E-11 1E-15 102.5 9.9 69 337-406 27-121 (144)
163 1kng_A Thiol:disulfide interch 99.2 1.9E-11 6.6E-16 104.8 8.8 88 337-429 41-150 (156)
164 4fo5_A Thioredoxin-like protei 99.2 2.5E-11 8.6E-16 102.9 9.3 88 337-429 31-143 (143)
165 3fw2_A Thiol-disulfide oxidore 99.2 8.5E-11 2.9E-15 100.4 12.5 88 337-429 32-146 (150)
166 2b1k_A Thiol:disulfide interch 99.2 2.8E-11 9.7E-16 105.4 9.1 86 337-429 50-158 (168)
167 1o8x_A Tryparedoxin, TRYX, TXN 99.2 6.2E-11 2.1E-15 100.8 10.5 69 337-406 27-121 (146)
168 3a2k_A TRNA(Ile)-lysidine synt 99.2 8.7E-11 3E-15 119.5 13.1 149 74-239 19-188 (464)
169 1kor_A Argininosuccinate synth 99.2 3.1E-11 1.1E-15 119.8 9.1 149 75-239 2-166 (400)
170 2dlx_A UBX domain-containing p 99.2 1E-10 3.4E-15 100.7 11.1 100 326-429 29-134 (153)
171 1o73_A Tryparedoxin; electron 99.2 6.5E-11 2.2E-15 100.2 9.8 69 337-406 27-121 (144)
172 1ni5_A Putative cell cycle pro 99.2 9.3E-11 3.2E-15 118.2 12.4 157 65-239 6-177 (433)
173 2ywi_A Hypothetical conserved 99.2 7.8E-11 2.7E-15 105.3 10.6 90 337-429 44-172 (196)
174 3s9f_A Tryparedoxin; thioredox 99.2 1E-10 3.6E-15 102.0 10.9 67 337-404 47-137 (165)
175 2hyx_A Protein DIPZ; thioredox 99.2 9.9E-11 3.4E-15 114.6 11.3 90 337-429 81-197 (352)
176 3kh7_A Thiol:disulfide interch 99.2 9.5E-11 3.2E-15 103.4 10.0 87 337-429 57-165 (176)
177 2pg3_A Queuosine biosynthesis 99.1 2.7E-10 9.4E-15 105.1 11.6 160 74-237 3-181 (232)
178 2cvb_A Probable thiol-disulfid 99.1 1.6E-10 5.5E-15 102.7 9.3 88 337-429 32-157 (188)
179 1jfu_A Thiol:disulfide interch 99.1 5.2E-10 1.8E-14 99.1 12.1 92 337-429 59-178 (186)
180 2hls_A Protein disulfide oxido 99.1 2.3E-10 7.9E-15 106.4 10.1 93 326-428 15-114 (243)
181 3u5r_E Uncharacterized protein 99.1 2.9E-10 1E-14 103.8 10.4 91 337-429 57-185 (218)
182 2ls5_A Uncharacterized protein 98.7 9.5E-12 3.3E-16 107.4 0.0 88 337-429 32-146 (159)
183 2hma_A Probable tRNA (5-methyl 99.1 4.2E-10 1.4E-14 111.1 11.7 161 73-237 9-193 (376)
184 3kp9_A Vkorc1/thioredoxin doma 99.1 2.4E-11 8.4E-16 115.2 2.3 71 341-427 200-276 (291)
185 2lus_A Thioredoxion; CR-Trp16, 98.7 1.2E-11 4.1E-16 104.5 0.0 69 337-406 24-120 (143)
186 3drn_A Peroxiredoxin, bacterio 99.0 1.2E-09 4E-14 94.7 11.5 91 337-429 27-147 (161)
187 1wjk_A C330018D20RIK protein; 99.0 3.8E-10 1.3E-14 90.0 7.6 79 337-429 14-94 (100)
188 1hyu_A AHPF, alkyl hydroperoxi 99.0 9E-10 3.1E-14 113.8 11.3 96 321-428 102-197 (521)
189 2rli_A SCO2 protein homolog, m 99.0 1.6E-09 5.4E-14 94.3 10.5 91 337-429 25-162 (171)
190 2ggt_A SCO1 protein homolog, m 99.0 1.4E-09 4.8E-14 93.9 9.8 91 337-429 22-159 (164)
191 1xng_A NH(3)-dependent NAD(+) 99.0 1.4E-09 4.8E-14 102.6 9.8 155 63-237 14-175 (268)
192 2vup_A Glutathione peroxidase- 99.0 2E-09 6.8E-14 96.0 10.1 92 337-429 47-183 (190)
193 3fiu_A NH(3)-dependent NAD(+) 99.0 2.1E-09 7.2E-14 100.1 10.4 157 63-236 18-184 (249)
194 2k8s_A Thioredoxin; dimer, str 99.0 1.3E-10 4.4E-15 88.6 1.4 61 341-406 3-64 (80)
195 3dwv_A Glutathione peroxidase- 99.0 2E-09 6.7E-14 95.8 9.4 92 337-429 45-181 (187)
196 2der_A TRNA-specific 2-thiouri 98.9 1.6E-09 5.6E-14 106.9 9.4 159 73-237 17-201 (380)
197 2bmx_A Alkyl hydroperoxidase C 98.9 1.9E-09 6.4E-14 96.6 9.0 92 337-429 44-168 (195)
198 1xvw_A Hypothetical protein RV 98.9 2.3E-09 8E-14 92.3 9.3 91 338-430 35-159 (160)
199 3tqi_A GMP synthase [glutamine 98.9 1E-09 3.5E-14 113.2 8.0 167 74-246 231-406 (527)
200 3cmi_A Peroxiredoxin HYR1; thi 98.9 1.6E-09 5.6E-14 94.7 8.0 91 337-429 31-166 (171)
201 2v1m_A Glutathione peroxidase; 98.9 3.2E-09 1.1E-13 92.1 9.7 91 337-429 30-165 (169)
202 2e18_A NH(3)-dependent NAD(+) 98.9 1.9E-09 6.6E-14 101.0 8.8 146 74-241 23-176 (257)
203 2p5q_A Glutathione peroxidase 98.9 2.2E-09 7.4E-14 93.3 8.4 91 337-429 31-166 (170)
204 1we0_A Alkyl hydroperoxide red 98.9 1.6E-09 5.3E-14 96.3 7.4 92 337-429 30-155 (187)
205 1zof_A Alkyl hydroperoxide-red 98.9 1.2E-09 4.2E-14 97.9 6.8 92 337-429 32-159 (198)
206 1ego_A Glutaredoxin; electron 98.9 3.2E-09 1.1E-13 81.3 8.0 75 341-428 2-81 (85)
207 2k6v_A Putative cytochrome C o 98.9 1.1E-09 3.8E-14 95.3 6.0 90 337-429 34-171 (172)
208 2e7p_A Glutaredoxin; thioredox 98.9 7.2E-10 2.5E-14 90.4 4.5 82 337-429 18-106 (116)
209 2p31_A CL683, glutathione pero 98.9 1.8E-09 6.2E-14 95.4 6.9 91 337-429 48-179 (181)
210 3p52_A NH(3)-dependent NAD(+) 98.9 4.3E-09 1.5E-13 97.9 9.6 155 62-236 14-175 (249)
211 2f8a_A Glutathione peroxidase 98.9 5.6E-09 1.9E-13 94.6 9.0 44 337-380 46-89 (208)
212 1qmv_A Human thioredoxin perox 98.8 9.6E-09 3.3E-13 92.0 10.0 92 337-429 33-161 (197)
213 2obi_A PHGPX, GPX-4, phospholi 98.8 6.4E-09 2.2E-13 91.9 8.7 91 337-429 46-182 (183)
214 1gpm_A GMP synthetase, XMP ami 98.8 1.2E-08 4.2E-13 105.1 10.0 165 74-245 228-403 (525)
215 2gs3_A PHGPX, GPX-4, phospholi 98.8 1.2E-08 3.9E-13 90.5 8.5 91 337-429 48-184 (185)
216 1uul_A Tryparedoxin peroxidase 98.8 1.5E-08 5.2E-13 91.1 9.3 92 337-429 35-163 (202)
217 4f9z_D Endoplasmic reticulum r 98.8 8.7E-08 3E-12 87.8 14.3 106 318-429 113-223 (227)
218 1zye_A Thioredoxin-dependent p 98.8 1.7E-08 5.8E-13 92.3 9.2 92 337-429 55-183 (220)
219 2h01_A 2-Cys peroxiredoxin; th 98.8 1.1E-08 3.8E-13 91.2 7.6 92 337-429 30-157 (192)
220 3kij_A Probable glutathione pe 98.8 1.3E-08 4.3E-13 89.8 7.6 45 337-381 37-81 (180)
221 2i81_A 2-Cys peroxiredoxin; st 98.8 2.3E-08 7.8E-13 90.9 9.2 92 337-429 51-178 (213)
222 3ztl_A Thioredoxin peroxidase; 98.7 3.5E-08 1.2E-12 90.3 9.8 92 337-429 68-196 (222)
223 2c5s_A THII, probable thiamine 98.7 2.7E-08 9.2E-13 99.5 9.6 144 75-236 189-344 (413)
224 3gkn_A Bacterioferritin comigr 98.7 6.3E-08 2.2E-12 83.5 10.8 92 337-429 34-160 (163)
225 2jsy_A Probable thiol peroxida 98.7 1E-07 3.5E-12 82.6 11.0 90 337-429 43-165 (167)
226 3gyk_A 27KDA outer membrane pr 98.7 6.6E-08 2.3E-12 84.6 9.2 82 337-429 21-171 (175)
227 1k92_A Argininosuccinate synth 98.7 2.4E-08 8.1E-13 99.9 6.6 160 74-250 11-195 (455)
228 1eej_A Thiol:disulfide interch 98.6 5.1E-08 1.8E-12 88.8 7.3 81 337-429 85-209 (216)
229 2b7k_A SCO1 protein; metalloch 98.6 1.7E-07 5.7E-12 84.1 10.1 90 337-428 40-176 (200)
230 2nz2_A Argininosuccinate synth 98.6 8.7E-08 3E-12 95.3 8.9 148 74-238 6-173 (413)
231 1xzo_A BSSCO, hypothetical pro 98.6 1.3E-07 4.4E-12 82.3 8.9 92 337-429 32-170 (174)
232 1t3b_A Thiol:disulfide interch 98.6 1E-07 3.5E-12 86.4 8.2 82 337-430 85-210 (211)
233 1xvq_A Thiol peroxidase; thior 98.6 9.6E-08 3.3E-12 83.8 7.1 72 337-412 43-145 (175)
234 3hd5_A Thiol:disulfide interch 98.5 3.3E-07 1.1E-11 81.7 9.6 43 337-380 24-66 (195)
235 1r7h_A NRDH-redoxin; thioredox 98.5 2.6E-07 8.7E-12 68.6 7.3 69 342-427 3-74 (75)
236 1h75_A Glutaredoxin-like prote 98.5 1.6E-07 5.6E-12 71.0 6.3 71 342-428 3-75 (81)
237 2a4v_A Peroxiredoxin DOT5; yea 98.5 5.3E-07 1.8E-11 77.5 10.0 66 338-406 35-128 (159)
238 2c0d_A Thioredoxin peroxidase 98.5 3.1E-07 1E-11 83.9 8.9 92 337-429 55-182 (221)
239 3ixr_A Bacterioferritin comigr 98.5 7.1E-07 2.4E-11 78.5 10.6 92 337-429 50-176 (179)
240 3uow_A GMP synthetase; structu 98.5 8.4E-07 2.9E-11 91.8 12.7 167 73-245 255-434 (556)
241 2i3y_A Epididymal secretory gl 98.5 6.2E-07 2.1E-11 81.5 9.9 43 337-380 55-97 (215)
242 3a2v_A Probable peroxiredoxin; 98.5 3.3E-07 1.1E-11 85.2 8.1 92 337-429 32-160 (249)
243 2l4c_A Endoplasmic reticulum r 98.4 2.2E-06 7.7E-11 70.7 12.0 97 319-429 22-122 (124)
244 2pn8_A Peroxiredoxin-4; thiore 98.4 9.2E-07 3.1E-11 80.1 10.1 92 337-429 47-175 (211)
245 1n8j_A AHPC, alkyl hydroperoxi 98.4 8E-07 2.7E-11 78.7 9.2 92 337-429 29-154 (186)
246 2r37_A Glutathione peroxidase 98.4 1.1E-06 3.7E-11 79.4 10.1 43 337-380 37-79 (207)
247 3h93_A Thiol:disulfide interch 98.4 5E-07 1.7E-11 80.3 7.7 42 337-379 24-65 (192)
248 4g2e_A Peroxiredoxin; redox pr 98.4 2.7E-07 9.2E-12 79.5 5.6 93 337-430 29-157 (157)
249 1v58_A Thiol:disulfide interch 98.4 6.7E-07 2.3E-11 82.8 8.1 85 337-429 96-231 (241)
250 1vl2_A Argininosuccinate synth 98.3 1.3E-06 4.4E-11 86.4 9.7 152 70-238 11-182 (421)
251 3me7_A Putative uncharacterize 98.3 2E-06 6.9E-11 74.9 9.6 92 337-429 27-160 (170)
252 3us3_A Calsequestrin-1; calciu 98.3 1.5E-06 5E-11 85.6 9.5 140 275-429 74-225 (367)
253 3qpm_A Peroxiredoxin; oxidored 98.3 1.7E-06 5.8E-11 80.0 9.2 92 337-429 76-204 (240)
254 4f9z_D Endoplasmic reticulum r 98.3 1.6E-06 5.5E-11 79.3 8.8 97 318-428 9-109 (227)
255 2vxo_A GMP synthase [glutamine 98.3 2.4E-06 8.1E-11 90.5 10.2 166 74-243 241-440 (697)
256 1psq_A Probable thiol peroxida 98.3 4.2E-06 1.5E-10 72.1 10.0 90 337-429 41-163 (163)
257 4gqc_A Thiol peroxidase, perox 98.3 3.2E-07 1.1E-11 79.7 2.8 92 337-429 32-158 (164)
258 1sji_A Calsequestrin 2, calseq 98.2 3.1E-06 1.1E-10 82.6 9.6 190 218-429 13-223 (350)
259 1kte_A Thioltransferase; redox 98.2 9.1E-07 3.1E-11 70.4 3.9 58 342-406 14-77 (105)
260 1nm3_A Protein HI0572; hybrid, 98.2 6.6E-06 2.2E-10 75.8 9.8 90 337-428 32-164 (241)
261 2hze_A Glutaredoxin-1; thiored 98.1 1.6E-06 5.5E-11 70.3 4.7 60 340-406 19-84 (114)
262 3tjj_A Peroxiredoxin-4; thiore 98.1 3.5E-06 1.2E-10 78.6 7.2 92 337-429 90-218 (254)
263 3uma_A Hypothetical peroxiredo 98.1 7.8E-06 2.7E-10 72.3 8.8 91 337-428 55-183 (184)
264 3p7x_A Probable thiol peroxida 98.1 8.9E-06 3E-10 70.3 8.9 89 337-429 45-166 (166)
265 1q98_A Thiol peroxidase, TPX; 98.1 4.9E-06 1.7E-10 71.9 6.9 73 337-412 42-146 (165)
266 1prx_A HORF6; peroxiredoxin, h 98.1 2.5E-05 8.6E-10 71.3 11.6 89 340-429 34-167 (224)
267 1tp9_A Peroxiredoxin, PRX D (t 98.1 8.2E-06 2.8E-10 70.3 7.8 69 337-406 34-138 (162)
268 2wfc_A Peroxiredoxin 5, PRDX5; 98.1 8.8E-06 3E-10 70.7 7.8 70 337-407 30-135 (167)
269 2yzh_A Probable thiol peroxida 98.0 1.3E-05 4.5E-10 69.5 8.6 91 337-429 46-170 (171)
270 3n05_A NH(3)-dependent NAD(+) 98.0 6.7E-06 2.3E-10 86.0 7.6 153 63-234 315-473 (590)
271 2v2g_A Peroxiredoxin 6; oxidor 98.0 2.7E-05 9.1E-10 71.5 10.6 91 338-429 29-163 (233)
272 2ec4_A FAS-associated factor 1 98.0 5.3E-05 1.8E-09 66.5 11.9 102 325-428 37-165 (178)
273 1un2_A DSBA, thiol-disulfide i 98.0 2.1E-06 7.2E-11 76.9 2.7 44 338-382 113-159 (197)
274 2klx_A Glutaredoxin; thioredox 98.0 9.6E-06 3.3E-10 62.4 6.2 55 341-406 7-64 (89)
275 3q4g_A NH(3)-dependent NAD(+) 98.0 1.5E-05 5.2E-10 74.9 8.3 156 63-236 29-211 (279)
276 3bj5_A Protein disulfide-isome 98.0 8.3E-05 2.8E-09 63.1 12.1 106 318-429 14-125 (147)
277 2znm_A Thiol:disulfide interch 98.0 1.4E-05 4.7E-10 70.9 7.3 42 337-379 21-62 (195)
278 3mng_A Peroxiredoxin-5, mitoch 98.0 2E-05 6.8E-10 68.9 8.1 91 337-428 42-172 (173)
279 3dpi_A NAD+ synthetase; ssgcid 97.9 2.4E-05 8.3E-10 73.6 8.9 158 63-236 35-211 (285)
280 3zrd_A Thiol peroxidase; oxido 97.9 1.5E-05 5E-10 71.4 7.1 68 337-407 77-176 (200)
281 2lqo_A Putative glutaredoxin R 97.9 3.2E-05 1.1E-09 60.1 8.1 73 341-429 5-82 (92)
282 1kqp_A NAD+ synthase, NH(3)-de 97.9 2.3E-05 7.9E-10 73.6 8.7 154 62-236 26-199 (271)
283 2cq9_A GLRX2 protein, glutared 97.9 1.3E-05 4.3E-10 66.7 5.9 67 325-406 17-89 (130)
284 2yan_A Glutaredoxin-3; oxidore 97.9 1.9E-05 6.3E-10 63.0 6.6 65 326-406 8-81 (105)
285 3c1r_A Glutaredoxin-1; oxidize 97.9 5.8E-06 2E-10 67.5 3.4 69 326-406 16-91 (118)
286 3ic4_A Glutaredoxin (GRX-1); s 97.9 1.3E-05 4.5E-10 61.9 5.2 70 342-427 14-91 (92)
287 2ht9_A Glutaredoxin-2; thiored 97.9 1.4E-05 4.9E-10 67.8 5.8 66 326-406 40-111 (146)
288 3qmx_A Glutaredoxin A, glutare 97.9 2.5E-05 8.6E-10 61.6 6.8 59 338-406 14-76 (99)
289 1xcc_A 1-Cys peroxiredoxin; un 97.9 2.5E-05 8.7E-10 71.0 7.7 89 340-429 34-164 (220)
290 4hde_A SCO1/SENC family lipopr 97.9 0.00011 3.6E-09 63.9 11.3 92 337-429 31-168 (170)
291 2rem_A Disulfide oxidoreductas 97.8 0.00012 4E-09 64.6 11.4 42 337-379 24-65 (193)
292 1z6m_A Conserved hypothetical 97.8 6.5E-05 2.2E-09 65.3 9.5 42 337-379 26-69 (175)
293 3gv1_A Disulfide interchange p 97.8 2.6E-05 8.9E-10 66.3 6.5 80 337-429 13-137 (147)
294 1wxi_A NH(3)-dependent NAD(+) 97.8 7.8E-05 2.7E-09 70.1 10.4 154 62-236 27-202 (275)
295 2pwj_A Mitochondrial peroxired 97.8 1.8E-05 6.3E-10 68.9 5.4 43 339-381 45-89 (171)
296 4dvc_A Thiol:disulfide interch 97.8 7E-05 2.4E-09 65.3 9.2 40 337-377 20-59 (184)
297 3nzn_A Glutaredoxin; structura 97.8 8E-05 2.7E-09 59.0 8.1 74 339-426 21-101 (103)
298 2h8l_A Protein disulfide-isome 97.8 0.00015 5.1E-09 67.2 11.0 97 318-428 6-110 (252)
299 3ec3_A Protein disulfide-isome 97.7 0.00015 5.2E-09 67.1 10.4 99 318-429 6-113 (250)
300 1fov_A Glutaredoxin 3, GRX3; a 97.7 5.7E-05 2E-09 56.7 5.9 68 342-427 3-73 (82)
301 2r2j_A Thioredoxin domain-cont 97.7 0.00026 9E-09 69.7 12.0 104 318-429 219-327 (382)
302 2khp_A Glutaredoxin; thioredox 97.7 6.7E-05 2.3E-09 57.8 5.9 55 341-406 7-65 (92)
303 3rhb_A ATGRXC5, glutaredoxin-C 97.6 5.1E-05 1.8E-09 61.1 5.3 55 342-406 21-82 (113)
304 3rjz_A N-type ATP pyrophosphat 97.6 0.00011 3.9E-09 67.1 7.7 126 75-235 6-140 (237)
305 1vbk_A Hypothetical protein PH 97.5 0.00016 5.5E-09 69.0 7.9 118 75-235 181-307 (307)
306 3msz_A Glutaredoxin 1; alpha-b 97.5 0.00031 1.1E-08 53.3 7.7 74 340-429 4-85 (89)
307 3hz8_A Thiol:disulfide interch 97.4 0.00016 5.5E-09 64.2 5.7 43 337-380 23-65 (193)
308 3l9s_A Thiol:disulfide interch 97.3 0.00032 1.1E-08 62.1 6.6 41 338-379 21-64 (191)
309 1wik_A Thioredoxin-like protei 97.3 0.00044 1.5E-08 55.2 6.6 66 326-406 6-79 (109)
310 3ctg_A Glutaredoxin-2; reduced 97.3 0.00022 7.5E-09 59.0 4.9 70 325-406 27-103 (129)
311 3h8q_A Thioredoxin reductase 3 97.3 0.00028 9.6E-09 56.9 5.4 66 326-406 8-79 (114)
312 3sdb_A Glutamine-dependent NAD 97.3 0.00043 1.5E-08 73.2 8.1 69 64-132 351-428 (680)
313 2h8l_A Protein disulfide-isome 97.3 0.0012 4.2E-08 60.9 10.1 103 318-429 114-228 (252)
314 3keb_A Probable thiol peroxida 97.3 0.00092 3.2E-08 60.6 9.0 87 337-429 47-174 (224)
315 3sbc_A Peroxiredoxin TSA1; alp 97.3 0.00099 3.4E-08 60.0 9.0 93 337-430 51-180 (216)
316 3ilv_A Glutamine-dependent NAD 97.2 0.0012 4.1E-08 69.4 10.5 153 69-236 298-505 (634)
317 3ed3_A Protein disulfide-isome 97.1 0.0011 3.7E-08 63.0 8.6 135 284-427 88-263 (298)
318 3ec3_A Protein disulfide-isome 97.1 0.0055 1.9E-07 56.4 12.8 103 318-429 116-226 (250)
319 3l9v_A Putative thiol-disulfid 97.1 0.00025 8.6E-09 62.7 3.0 42 338-380 14-58 (189)
320 2wci_A Glutaredoxin-4; redox-a 96.8 0.0008 2.7E-08 56.1 3.6 67 326-406 26-99 (135)
321 3gha_A Disulfide bond formatio 96.7 0.0081 2.8E-07 53.5 10.0 43 337-379 28-72 (202)
322 4f82_A Thioredoxin reductase; 96.7 0.0039 1.3E-07 54.3 7.3 77 327-407 40-151 (176)
323 3feu_A Putative lipoprotein; a 96.7 0.0011 3.7E-08 58.3 3.8 39 338-379 22-60 (185)
324 3l4n_A Monothiol glutaredoxin- 96.6 0.002 6.8E-08 53.0 4.5 71 326-406 5-79 (127)
325 4eo3_A Bacterioferritin comigr 96.5 0.012 4E-07 56.5 10.0 88 337-429 23-137 (322)
326 3f4s_A Alpha-DSBA1, putative u 96.3 0.015 5E-07 52.8 9.4 42 337-378 38-81 (226)
327 3tue_A Tryparedoxin peroxidase 96.3 0.013 4.6E-07 52.7 8.6 93 337-430 55-184 (219)
328 3zyw_A Glutaredoxin-3; metal b 96.2 0.0078 2.7E-07 48.1 6.1 59 337-406 14-80 (111)
329 3ipz_A Monothiol glutaredoxin- 96.2 0.0078 2.7E-07 47.9 6.0 59 337-406 16-82 (109)
330 1nm3_A Protein HI0572; hybrid, 96.0 0.015 5E-07 53.1 7.8 58 339-406 169-228 (241)
331 1jgt_A Beta-lactam synthetase; 96.0 0.0058 2E-07 62.5 5.4 117 63-186 228-353 (513)
332 2axo_A Hypothetical protein AT 96.0 0.059 2E-06 49.9 11.5 79 339-428 43-140 (270)
333 1ct9_A Asparagine synthetase B 95.9 0.025 8.5E-07 58.3 9.7 106 74-186 227-353 (553)
334 1aba_A Glutaredoxin; electron 95.9 0.015 5.1E-07 44.0 6.1 55 342-406 2-74 (87)
335 1q15_A CARA; CMPR, (2S,5S)-5-c 95.8 0.0079 2.7E-07 61.3 5.3 107 74-187 239-351 (503)
336 3q6o_A Sulfhydryl oxidase 1; p 95.7 0.073 2.5E-06 48.4 11.2 97 321-429 141-238 (244)
337 4f4h_A Glutamine dependent NAD 95.7 0.054 1.8E-06 55.9 11.2 67 66-132 292-362 (565)
338 3gx8_A Monothiol glutaredoxin- 95.7 0.023 7.8E-07 46.1 6.8 59 338-406 15-83 (121)
339 2ct6_A SH3 domain-binding glut 95.7 0.021 7.1E-07 45.5 6.3 55 341-406 9-81 (111)
340 1t1v_A SH3BGRL3, SH3 domain-bi 95.6 0.02 6.7E-07 43.9 5.8 54 342-406 4-69 (93)
341 2wem_A Glutaredoxin-related pr 94.8 0.042 1.4E-06 44.3 5.7 65 327-406 12-85 (118)
342 3c7m_A Thiol:disulfide interch 94.2 0.078 2.7E-06 46.1 6.4 41 338-379 17-58 (195)
343 3t58_A Sulfhydryl oxidase 1; o 94.2 0.13 4.6E-06 52.4 8.9 97 320-428 140-237 (519)
344 1xiy_A Peroxiredoxin, pfaop; a 93.3 0.15 5.3E-06 44.3 6.6 91 337-428 42-179 (182)
345 3kzq_A Putative uncharacterize 92.5 1.4 4.7E-05 38.6 11.9 30 340-369 3-32 (208)
346 1t4y_A Adaptive-response senso 91.8 2.9 9.9E-05 32.4 11.1 82 341-427 13-95 (105)
347 1u6t_A SH3 domain-binding glut 91.3 0.37 1.3E-05 38.8 5.9 57 341-400 1-69 (121)
348 2wul_A Glutaredoxin related pr 90.4 0.39 1.3E-05 38.5 5.3 66 326-406 11-85 (118)
349 3gn3_A Putative protein-disulf 89.1 0.6 2.1E-05 40.4 5.9 41 337-378 13-54 (182)
350 2kok_A Arsenate reductase; bru 88.9 1.1 3.9E-05 35.7 7.0 33 342-381 7-39 (120)
351 3bci_A Disulfide bond protein 88.1 1 3.5E-05 38.7 6.7 41 337-377 10-52 (186)
352 2xhf_A Peroxiredoxin 5; oxidor 87.9 0.33 1.1E-05 41.7 3.3 44 337-380 41-86 (171)
353 2jad_A Yellow fluorescent prot 87.9 0.24 8.4E-06 47.7 2.7 60 342-406 263-327 (362)
354 2in3_A Hypothetical protein; D 87.3 0.68 2.3E-05 40.8 5.2 43 384-429 166-208 (216)
355 3gmf_A Protein-disulfide isome 86.2 1.5 5.2E-05 38.6 6.8 43 337-379 14-58 (205)
356 3tdg_A DSBG, putative uncharac 85.6 0.63 2.2E-05 43.0 4.1 30 337-366 146-175 (273)
357 2x8g_A Thioredoxin glutathione 81.5 1.3 4.6E-05 45.6 5.0 66 326-406 9-80 (598)
358 2g2q_A Glutaredoxin-2; thiored 80.8 2.7 9.3E-05 33.2 5.3 84 339-429 2-114 (124)
359 1z3e_A Regulatory protein SPX; 75.4 3.3 0.00011 33.6 4.7 34 342-382 3-36 (132)
360 3bci_A Disulfide bond protein 72.8 3.2 0.00011 35.4 4.2 38 384-429 139-176 (186)
361 3ktb_A Arsenical resistance op 72.5 7.7 0.00026 30.2 5.8 50 370-426 42-101 (106)
362 3feu_A Putative lipoprotein; a 72.3 3.5 0.00012 35.4 4.3 41 384-429 142-182 (185)
363 3l78_A Regulatory protein SPX; 69.7 5.4 0.00019 31.7 4.6 34 342-382 2-35 (120)
364 1rw1_A Conserved hypothetical 67.8 4.2 0.00014 32.0 3.5 34 342-382 2-35 (114)
365 3kgk_A Arsenical resistance op 65.3 7.7 0.00026 30.4 4.4 51 370-427 39-99 (110)
366 3fz4_A Putative arsenate reduc 65.0 8.8 0.0003 30.5 4.9 34 342-382 5-38 (120)
367 1wwj_A Circadian clock protein 64.5 2.4 8.2E-05 32.9 1.4 61 339-401 7-67 (105)
368 3c7m_A Thiol:disulfide interch 64.1 3.3 0.00011 35.4 2.4 41 384-429 152-192 (195)
369 3gn3_A Putative protein-disulf 64.1 5.6 0.00019 34.1 3.8 36 385-426 145-181 (182)
370 3hz8_A Thiol:disulfide interch 60.2 12 0.00043 32.0 5.5 38 384-429 144-181 (193)
371 3l9v_A Putative thiol-disulfid 54.2 12 0.00042 31.9 4.3 20 384-406 135-154 (189)
372 3gmf_A Protein-disulfide isome 53.1 11 0.00037 33.0 3.8 34 389-429 162-195 (205)
373 3gl5_A Putative DSBA oxidoredu 53.1 16 0.00054 32.7 5.1 39 384-429 173-211 (239)
374 2in3_A Hypothetical protein; D 52.8 25 0.00086 30.2 6.3 38 339-377 7-44 (216)
375 1hyu_A AHPF, alkyl hydroperoxi 51.0 37 0.0013 34.0 8.0 77 337-428 17-93 (521)
376 3gkx_A Putative ARSC family re 49.0 11 0.00039 29.8 3.0 34 342-382 6-39 (120)
377 2imf_A HCCA isomerase, 2-hydro 47.3 14 0.00048 31.8 3.7 38 384-429 157-194 (203)
378 2d8c_A Phosphatidylcholine:cer 44.7 11 0.00039 28.7 2.2 21 215-235 14-34 (97)
379 1un2_A DSBA, thiol-disulfide i 44.4 13 0.00044 32.2 2.9 20 384-406 40-59 (197)
380 1s3c_A Arsenate reductase; ARS 43.6 14 0.00047 30.3 2.7 78 342-427 4-86 (141)
381 2gle_A Neurabin-1; SAM domain, 42.7 6.5 0.00022 28.2 0.6 21 216-236 2-22 (74)
382 3rdw_A Putative arsenate reduc 42.1 13 0.00043 29.6 2.2 34 342-382 7-40 (121)
383 2lic_A Vitellogenin; lipid tra 40.5 6.9 0.00024 22.6 0.3 20 14-33 15-34 (35)
384 3f0i_A Arsenate reductase; str 40.3 17 0.00058 28.7 2.7 33 342-381 6-38 (119)
385 3fz5_A Possible 2-hydroxychrom 36.8 24 0.00081 30.4 3.4 37 384-428 163-199 (202)
386 3bs7_A Protein aveugle; sterIl 36.5 12 0.00041 27.0 1.2 18 216-233 1-18 (78)
387 3bq7_A Diacylglycerol kinase d 34.4 19 0.00065 26.2 2.0 22 215-236 4-25 (81)
388 3rpp_A Glutathione S-transfera 33.2 38 0.0013 30.0 4.2 41 384-428 172-212 (234)
389 3lyk_A Stringent starvation pr 33.0 1.4E+02 0.0048 25.2 7.9 59 340-406 5-63 (216)
390 1kw4_A Polyhomeotic; SAM domai 33.0 19 0.00066 26.9 1.8 20 216-235 12-32 (89)
391 3tx2_A Probable 6-phosphogluco 31.8 1.2E+02 0.0041 27.1 7.4 46 62-108 28-79 (251)
392 2yci_X 5-methyltetrahydrofolat 31.3 1.5E+02 0.005 27.0 7.9 74 61-134 87-171 (271)
393 1r4w_A Glutathione S-transfera 30.3 44 0.0015 29.1 4.2 41 384-428 172-212 (226)
394 2imf_A HCCA isomerase, 2-hydro 28.4 77 0.0026 26.9 5.3 35 341-376 2-36 (203)
395 3l4e_A Uncharacterized peptida 27.7 1.3E+02 0.0045 25.9 6.7 105 76-181 5-119 (206)
396 4dej_A Glutathione S-transfera 27.5 1.9E+02 0.0064 24.9 7.9 61 338-406 9-70 (231)
397 1v85_A Similar to ring finger 26.5 28 0.00095 26.0 1.7 24 212-235 11-34 (91)
398 2e8o_A SAM domain and HD domai 26.3 31 0.0011 26.4 2.0 22 215-236 24-45 (103)
399 3oc6_A 6-phosphogluconolactona 24.3 1.8E+02 0.006 25.9 7.1 45 62-107 28-78 (248)
400 2r4v_A XAP121, chloride intrac 22.8 2.5E+02 0.0086 24.3 7.9 67 346-428 26-92 (247)
401 3tnj_A Universal stress protei 22.8 2.7E+02 0.0091 21.5 9.8 33 74-106 7-44 (150)
402 2a2p_A Selenoprotein M, SELM p 22.3 93 0.0032 24.9 4.1 34 395-428 55-88 (129)
403 3ndn_A O-succinylhomoserine su 22.2 3.8E+02 0.013 25.4 9.6 71 61-133 82-153 (414)
404 1f6y_A 5-methyltetrahydrofolat 20.4 2.3E+02 0.0079 25.4 7.1 73 62-134 79-162 (262)
405 3bs5_A Protein aveugle; sterIl 20.3 35 0.0012 26.4 1.2 23 213-235 18-42 (106)
406 3bs5_B Connector enhancer of k 20.2 48 0.0016 23.8 1.9 19 216-234 2-20 (80)
407 3loq_A Universal stress protei 20.2 4.5E+02 0.015 23.1 10.5 56 74-129 171-231 (294)
408 2ahe_A Chloride intracellular 20.0 4.1E+02 0.014 23.4 8.8 67 346-428 31-97 (267)
No 1
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.5e-58 Score=439.84 Aligned_cols=238 Identities=53% Similarity=1.016 Sum_probs=199.7
Q ss_pred ChhhHHHHHHhccCCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 042284 45 DHEDYEKLARGMESASPLEIMDKAFQKFGNDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKH 123 (430)
Q Consensus 45 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~ 123 (430)
+..++..+|++++.++++++|+++++.|+++++|+|| ||||+|| +|+.+.++++.|+|+|||.+||||++|+++++++
T Consensus 26 ~~~~~~~~~~~~~~~~a~~~l~~a~~~~g~~i~Va~S-GkDS~vLL~Ll~~~~~~i~vv~iDtg~~~~et~~~v~~~~~~ 104 (275)
T 2goy_A 26 QPFDLPALASSLADKSPQDILKAAFEHFGDELWISFS-GAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVREH 104 (275)
T ss_dssp --CCHHHHHHHHTTSCHHHHHHHHHHHHSTTEEEECC-SSTTHHHHHHHHHHCTTCCEEEECCSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCHHHHHHHHHHHcCCCEEEEee-cHHHHHHHHHHHHhCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4556889999999999999999999999777999999 9999776 8999999999999999999999999999999999
Q ss_pred hCCcEEEEccCchHHHHHHHhcCCCCCCccchhhhhhhhchHHHHHHHhcCceEEEeeeccCC-cccccCCCeeeecCCC
Q 042284 124 YGIRIEYTFPNAVEVQALVRTKGLFSFYEDGHQECCRIRKVRPLKRALKGLRAWITGQRKDQS-PGTRAEIPVVQIDTSF 202 (430)
Q Consensus 124 ~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es-~~~R~~~~~~~~d~~~ 202 (430)
||++++++.|+...+.+...+.|.+.++..+.++||.++|++|++++++++++|++|+|++|+ . .|+.+++++.+..+
T Consensus 105 ~gi~l~v~~~~~~~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~r~l~~~~~~itG~r~dds~~-~R~~~~~~~~d~~~ 183 (275)
T 2goy_A 105 YGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSPG-TRSQVAVLEIDGAF 183 (275)
T ss_dssp HTCCCEEECCCHHHHHHHHHHHCSCHHHHHCTHHHHHHHTHHHHHHHHHTCSEEECCCCGGGTTS-CSCCCCSEEECTTT
T ss_pred HCCeEEEEeCCccCHHHHHHHhCCCCccccCHHHHHHHHHHHHHHHHHHhcCchhcCchhhhhhh-hhhhCccccccccc
Confidence 999999999986555666677777666666678999999999999999999999999999999 5 89999999887533
Q ss_pred CcccCCCCCeEEEecccccchHHHHHHHHHcCCCCccccccCCcccCCcCCCCCCCCCCccccCCCcCCCCCcccccCCC
Q 042284 203 EGIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHN 282 (430)
Q Consensus 203 ~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp~~pLY~~Gy~siGC~~Ct~~~~~~~~~r~grw~~~~~~~~e~g~~~ 282 (430)
.. ..++.++++||++|+++|||.|++++||||||||++||+||||++||+++.+|+++|+|||||++..|+|||||.
T Consensus 184 ~~---~~~g~~~i~PL~~wt~~dV~~Yi~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~R~gRw~w~~~~k~ecGlh~ 260 (275)
T 2goy_A 184 ST---PEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHA 260 (275)
T ss_dssp CC---SSSCCEEECTTTTCCHHHHHHHHHHTTCCCCGGGGGTCSSCCCGGGBCCCCTTCCGGGGBSTTC-----------
T ss_pred cc---CCCCeEEEechHhCCHHHHHHHHHHhCCCCChHHHcCCCCCCCccCCCCCCCCCccccCccccCCCCCccCCCCc
Confidence 20 124689999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCccc
Q 042284 283 GNIKQ 287 (430)
Q Consensus 283 ~~i~~ 287 (430)
.+++.
T Consensus 261 ~~~~~ 265 (275)
T 2goy_A 261 GNLIS 265 (275)
T ss_dssp -----
T ss_pred Ccchh
Confidence 76654
No 2
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-55 Score=416.11 Aligned_cols=224 Identities=27% Similarity=0.427 Sum_probs=195.1
Q ss_pred hhhHHHHHHhccCC-CHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHhcCC---CcEEEEecCCCCCHHHHHHHHHH
Q 042284 46 HEDYEKLARGMESA-SPLEIMDKAFQKFGNDIAIAFSGAEDVVLI-EYAKLTGR---PFRVFSLDTGRLNPETHQFFDTV 120 (430)
Q Consensus 46 ~~~~~~l~~~l~~~-~~~~~i~~~~~~~~~~i~vs~SGGKDS~vl-~l~~~~~~---~i~vi~~DTg~~fpet~~~~~~~ 120 (430)
..+++.+|.+++.+ +|+++|+|+++.|+ +++|+|||||||+|| ||+.+..+ +++++|+|||.+||||++|++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~v~va~SGGkDS~vLL~ll~~~~~~~~~i~vv~iDtg~~~~et~~~v~~~ 92 (261)
T 2oq2_A 14 QEQLDHWNEQLIKLETPQEIIAWSIVTFP-HLFQTTAFGLTGLVTIDMLSKLSEKYYMPELLFIDTLHHFPQTLTLKNEI 92 (261)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHCS-SEEEECCCCHHHHHHHHHHHHHTTTSCCCEEEEECCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCHHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhCccCCCeeEEEecCCCCCHHHHHHHHHH
Confidence 44678999999999 99999999999997 499999999999776 89988876 89999999999999999999999
Q ss_pred HHHhCC----cEEEEccCch-HHHHHHHhcCCCCCCccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCC
Q 042284 121 EKHYGI----RIEYTFPNAV-EVQALVRTKGLFSFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEI 193 (430)
Q Consensus 121 ~~~~gl----~i~~~~p~~~-~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~ 193 (430)
+++||+ +++++.|+.. ...++....|.. ++..++.+||.++|++||+++++ ++++|++|+|++|+. .|+.+
T Consensus 93 ~~~~gl~~~~~l~v~~~~~~~~~~~~~~~~G~~-~~~~~~~~cc~~~K~~pl~~~l~~~g~~~~~tG~R~dds~-~R~~~ 170 (261)
T 2oq2_A 93 EKKYYQPKNQTIHVYKPDGCESEADFASKYGDF-LWEKDDDKYDYLAKVEPAHRAYKELHISAVFTGRRKSQGS-ARSQL 170 (261)
T ss_dssp HHHHTGGGTCCCEEECSTTCSSHHHHHHHHCTT-HHHHCHHHHHHHHTHHHHHHHHHHTTCSEEECCCCGGGCG-GGGGC
T ss_pred HHHhCCCCCCCeEEEecCCccCHHHHHHHhCCC-ccccChHHHHHHHhHHHHHHHHHHcCCCEEEEeccccchH-HHccC
Confidence 999999 9999998741 234455556643 23445689999999999999999 557999999999996 99999
Q ss_pred CeeeecCCCCcccCCCCCeEEEecccccchHHHHHHHHHcCCCCccccccCCcccCCcCCCCCCCCCCccccCCCcCCCC
Q 042284 194 PVVQIDTSFEGIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDA 273 (430)
Q Consensus 194 ~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp~~pLY~~Gy~siGC~~Ct~~~~~~~~~r~grw~~~~~ 273 (430)
+.+++++ +++.++++||++|+++|||.|++.+||||||||++||+||||++||.++.+|+++|+||| ++.
T Consensus 171 ~~~~~~~--------~~~~~ki~PL~~wt~~dV~~Yi~~~~lp~~pLy~~Gy~siGC~~ct~~~~~~~~eR~gRw--~~~ 240 (261)
T 2oq2_A 171 SIIEIDE--------LNGILKINPLINWTFEQVKQYIDANNVPYNELLDLGYRSIGDYHSTQPVKEGEDERAGRW--KGK 240 (261)
T ss_dssp CSEEEET--------TTTEEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCBGGGCCCCCTTSCTTTTTC-----
T ss_pred CceeecC--------CCCeEEEechHhCCHHHHHHHHHHcCCCCCchhhCCCCCCCCcCCCCcCCCCCCcccccc--CCC
Confidence 9988774 246899999999999999999999999999999999999999999999999999999997 677
Q ss_pred CcccccCCC
Q 042284 274 KAKECGLHN 282 (430)
Q Consensus 274 ~~~e~g~~~ 282 (430)
.|+|||||.
T Consensus 241 ~k~ecGlh~ 249 (261)
T 2oq2_A 241 AKTECGIHE 249 (261)
T ss_dssp --CCCTTTC
T ss_pred CCcccCCCC
Confidence 899999995
No 3
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=100.00 E-value=5.3e-54 Score=404.97 Aligned_cols=226 Identities=25% Similarity=0.389 Sum_probs=184.9
Q ss_pred CChhhHHHHHHhccCCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 042284 44 NDHEDYEKLARGMESASPLEIMDKAFQKFGNDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEK 122 (430)
Q Consensus 44 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~ 122 (430)
+...+++.+|.+++.++|+++|+|+++.|+++++|+|||||||+|| +|+.+..+++.++|+|||.+||||++|++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~v~va~SGG~DS~vLL~ll~~~~~~v~vv~idtg~~~~et~~~~~~~~~ 95 (252)
T 2o8v_A 16 DRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTD 95 (252)
T ss_dssp HHHHHTHHHHHHHTTSCHHHHHHHHHTTSCSCEEEECCCSTTHHHHHHHHHHHSTTCEEEECCCSCBCHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHhcCCCHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHHHHHHHHH
Confidence 3455678899999999999999999999987799999999999776 899998899999999999999999999999999
Q ss_pred HhCCcEEEEccCchHHHHHHHhcCCCCCCc--cchhhhhhhhchHHHHHHHhcCc--eEEEeeeccCCcccccCCCeeee
Q 042284 123 HYGIRIEYTFPNAVEVQALVRTKGLFSFYE--DGHQECCRIRKVRPLKRALKGLR--AWITGQRKDQSPGTRAEIPVVQI 198 (430)
Q Consensus 123 ~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~--~~~~~cc~~~K~~pl~~~~~~~~--~~i~G~R~~Es~~~R~~~~~~~~ 198 (430)
+||++++++.|+.. ...+....| ..+.. ..+.+||.++|+.||++++++.. +|++|+|++|+. .|+.++.++.
T Consensus 96 ~~gi~~~v~~~~~~-~~~~~~~~g-~~~~~~~~~~~~cc~~~K~~pl~~~l~~~~~~~~~tG~r~dds~-~R~~l~~~~~ 172 (252)
T 2o8v_A 96 KLKLNLKVYRATES-AAWQEARYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAI 172 (252)
T ss_dssp HTTCEEEECCCSSC-HHHHHHHTC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTCSEEEECCCSTTTT-CCTTSCSEEE
T ss_pred HhCCceEEEcCCCC-HHHHHHHcC-CccccCCchHHHHHHHHHHHHHHHHHHhcCCcEEEEeccccccc-ccccCceeec
Confidence 99999999988864 444555566 33322 13478999999999999999664 699999999997 9999988753
Q ss_pred cCCCCcccCCCCCeEEEecccccchHHHHHHHHHcCCCCccccccCCcccCCcCCCCCCCCCCccccCCCcCCCCCcccc
Q 042284 199 DTSFEGIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKEC 278 (430)
Q Consensus 199 d~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp~~pLY~~Gy~siGC~~Ct~~~~~~~~~r~grw~~~~~~~~e~ 278 (430)
. ++..+++||++|+++|||.|++++||||||||++||+||||++||+++.+|+++|+||| .+ .|+||
T Consensus 173 ~----------~~~~~i~PL~~wt~~dV~~y~~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~r~gRw--~~-~k~ec 239 (252)
T 2o8v_A 173 Q----------RGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRF--FG-LKREC 239 (252)
T ss_dssp S----------SSSEEECGGGSCCHHHHHHHHHHTTCCCCTTTTTTCSSCCBCTTTCC-----------------CCSCC
T ss_pred C----------CCeEEEechhhCCHHHHHHHHHHcCCCCChHHhCCCCCCCCcCcCCcCCCCCCcccccc--CC-CCccC
Confidence 2 25789999999999999999999999999999999999999999999999999999997 55 89999
Q ss_pred cCCCCCc
Q 042284 279 GLHNGNI 285 (430)
Q Consensus 279 g~~~~~i 285 (430)
|||..+.
T Consensus 240 glh~~~~ 246 (252)
T 2o8v_A 240 GLHEGLE 246 (252)
T ss_dssp CSCCC--
T ss_pred CCCCCcc
Confidence 9997544
No 4
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=100.00 E-value=3.8e-47 Score=359.66 Aligned_cols=204 Identities=16% Similarity=0.264 Sum_probs=172.8
Q ss_pred CccccceeEEEecCCCCccceeecCC-CChhhHHHHHHhccCCCHH-HHHHHHHHHcC---CcEEEEechhHHHHHH-HH
Q 042284 18 GSISSSFAVCYYGPHHKGVEGRIEST-NDHEDYEKLARGMESASPL-EIMDKAFQKFG---NDIAIAFSGAEDVVLI-EY 91 (430)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~-~~i~~~~~~~~---~~i~vs~SGGKDS~vl-~l 91 (430)
-|++++.+.| |+.++.++... .....+..++.+++.. + ++|++++++|+ ++++|||||||||+|| ||
T Consensus 5 ~~l~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~q~qir~S--~~~iLrea~~~f~~~~~~ialSfSGGKDStVLLhL 77 (308)
T 3fwk_A 5 MRLGDAAELC-----YNLTSSYLQIAAESDSIIAQTQRAINTT--KSILINETFPKWSPLNGEISFSYNGGKDCQVLLLL 77 (308)
T ss_dssp CCHHHHHHHH-----HHHHHHHHTCCCCTTSHHHHHHHHHHHH--HHHHHHHTTTTSCSSSSSEEEECCSSHHHHHHHHH
T ss_pred cCHHHHHHHH-----HHHHHHHHcccCChHHHHHHHHHHHHHH--HHHHHHHHHHHcccccCCEEEEecCChhHHHHHHH
Confidence 3688899999 88898888553 3433688888888754 6 59999999997 5799999999999776 88
Q ss_pred HHhc----------------------CCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHHHHHhcCCCC
Q 042284 92 AKLT----------------------GRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRTKGLFS 149 (430)
Q Consensus 92 ~~~~----------------------~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~ 149 (430)
+.++ .++++|||+|||++||||++|++++.++||++++++.|+...
T Consensus 78 ~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipvifiDTG~~FpET~ef~d~~~~~ygL~L~v~~p~~~~------------ 145 (308)
T 3fwk_A 78 YLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPTVFIDHDDTFKTLENFIEETSLRYSLSLYESDRDKCE------------ 145 (308)
T ss_dssp HHHHHHHHHTCCE-----------------EEEECCCTTCCHHHHHHHHHHHHHTTEEEEECCTTSCC------------
T ss_pred HHHHhhhhcccccccccccccccccCCCCccEEEEeCCCCCHHHHHHHHHHHHHhCCcEEEeCCCCCH------------
Confidence 7664 157999999999999999999999999999999999886421
Q ss_pred CCccchhhhhhhhchHHHHHHHhcCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEecccccchHHHHHH
Q 042284 150 FYEDGHQECCRIRKVRPLKRALKGLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQDIWNF 229 (430)
Q Consensus 150 ~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~y 229 (430)
...++||.++|++| ++++||+|+||+| + .|++++.++.+. .+|++.+|++||++||+.|||.|
T Consensus 146 ---~~~~~cc~~~K~~P------~~~AwitG~RR~e-~-~Ra~l~~~e~~d------~~w~~~iKVnPL~dWT~~DVW~Y 208 (308)
T 3fwk_A 146 ---TMAEAFETFLQVFP------ETKAIVIGIRHTD-P-FGEHLKPIQKTD------ANWPDFYRLQPLLHWNLANIWSF 208 (308)
T ss_dssp ---CHHHHHHHHHHHCT------TCCEEECCCCTTS-T-TCTTCCSEEECC------TTSCSCEEECTTTTCCHHHHHHH
T ss_pred ---HHHHHHHHHHHhCC------CCCEEEEEeecCC-c-ccCCCCeeeccC------CCCCCeEEEechhhCCHHHHHHH
Confidence 02358999999999 6899999999996 4 899999887643 24578999999999999999999
Q ss_pred HHHcCCCCccccccCCcccCCcCCCCCC
Q 042284 230 LRAMNIPINSLHSQGYISIGCEPCTRPV 257 (430)
Q Consensus 230 i~~~~lp~~pLY~~Gy~siGC~~Ct~~~ 257 (430)
|+.++|||||||++||+||||++||+|.
T Consensus 209 I~~~~LPynpLYd~GY~SIGC~~CT~pn 236 (308)
T 3fwk_A 209 LLYSNEPICELYRYGFTSLGNVEETLPN 236 (308)
T ss_dssp HHHHTCCCCGGGGGTCSSCCCTTTBCCC
T ss_pred HHHcCCCCCcHHhcCCCCCCCCccCCCC
Confidence 9999999999999999999999999975
No 5
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=100.00 E-value=8e-41 Score=324.86 Aligned_cols=201 Identities=27% Similarity=0.432 Sum_probs=137.6
Q ss_pred CCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHhc----CCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEcc
Q 042284 59 ASPLEIMDKAFQKFGNDIAIAFSGAEDVVLI-EYAKLT----GRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFP 133 (430)
Q Consensus 59 ~~~~~~i~~~~~~~~~~i~vs~SGGKDS~vl-~l~~~~----~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p 133 (430)
++++++|+++++.|++ ++|+|||||||+|| +|+.++ +++++++|+|||.+||||++|+++++++||++++++.+
T Consensus 33 ~~a~~ilr~~~~~~~~-ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vDtg~~~~et~~~v~~~~~~~gi~l~v~~~ 111 (325)
T 1zun_A 33 AESIHIIREVAAEFDN-PVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLDLITHIN 111 (325)
T ss_dssp HHHHHHHHHHHHHCSS-EEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHHHHHTTTCCEEEECC
T ss_pred HHHHHHHHHHHHhCCC-EEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4679999999999974 99999999999776 888776 56899999999999999999999999999999999987
Q ss_pred CchHHHHHHHhcCCCCCCccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeee-------cCCCC-
Q 042284 134 NAVEVQALVRTKGLFSFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQI-------DTSFE- 203 (430)
Q Consensus 134 ~~~~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~-------d~~~~- 203 (430)
+.. ...|.+.+ ..+.++||.++|+.||+++++ ++++|++|+|+||+. .|+.+++++. ++...
T Consensus 112 ~~~------~~~G~~~~-~~~~~~cc~~~K~~pL~~~l~e~g~~~i~tG~R~Des~-~Ra~~~~~~~r~~~~~~d~~~~r 183 (325)
T 1zun_A 112 PDG------VAQGINPF-THGSAKHTDIMKTEGLKQALDKHGFDAAFGGARRDEEK-SRAKERVYSFRDSKHRWDPKNQR 183 (325)
T ss_dssp ---------------------CCHHHHHHTHHHHHHHHHHHTCSEEECCCCTTSSG-GGGGCCSEEEECTTCCBCGGGCC
T ss_pred chH------HhcCCCcc-ccChHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhh-hhhcccceeccccccccCccccC
Confidence 643 12343333 235678999999999999998 678999999999997 9999888762 22110
Q ss_pred ----cc---cCCCCCeEEEecccccchHHHHHHHHHcCCCCcccc-------------------ccC-------------
Q 042284 204 ----GI---DGGKGSLVKWNPLANVKGQDIWNFLRAMNIPINSLH-------------------SQG------------- 244 (430)
Q Consensus 204 ----~~---~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp~~pLY-------------------~~G------------- 244 (430)
.. ....++.++++||++|++.|||.|++.++||||||| ++|
T Consensus 184 p~l~~~~n~~~~~g~~~~i~PLl~wt~~dIw~Yi~~~~lp~~~LY~~~~r~~~~r~g~~~~~~~~~g~~~~~~~~~~~~~ 263 (325)
T 1zun_A 184 PELWNVYNGNVNKGESIRVFPLSNWTELDIWQYIYLEGIPIVPLYFAAERDVIEKNGTLIMIDDERILEHLTDEEKSRIV 263 (325)
T ss_dssp CCCSSCCCCCCCTTCEEEECTTTTCCHHHHHHHHHHHTCCCCSCCSCC--------------------------------
T ss_pred cchhhhccccccCCCeEEEEchhhCCHHHHHHHHHHhCCCcchhhhcccccccccCCceeccchhhcccccCCCcccccc
Confidence 00 000124789999999999999999999999999999 699
Q ss_pred -----CcccCCcCCCCCCCCCC---------------ccccCCC
Q 042284 245 -----YISIGCEPCTRPVLPGQ---------------HEREGRW 268 (430)
Q Consensus 245 -----y~siGC~~Ct~~~~~~~---------------~~r~grw 268 (430)
|+||||++||.++.++. .||.|||
T Consensus 264 ~~~~ry~siGc~~cT~~v~~~~~~~~~~~~~~~~~~~~er~~R~ 307 (325)
T 1zun_A 264 KKKVRFRTLGCYPLTGAVESEATSLTDIIQEMLLTRTSERQGRV 307 (325)
T ss_dssp --------------------------------------------
T ss_pred ccccccCCcCCcccCCccCCCCccHHHHHHHHHhcCCCcccccc
Confidence 99999999999998763 4899996
No 6
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-41 Score=325.84 Aligned_cols=220 Identities=16% Similarity=0.267 Sum_probs=162.4
Q ss_pred ccccceeEEEecCCCCccceeecCCCChhhHHHHHHhccCCCHHH-HHHHHHHHcC---CcEEEEechhHHHHHH-HHHH
Q 042284 19 SISSSFAVCYYGPHHKGVEGRIESTNDHEDYEKLARGMESASPLE-IMDKAFQKFG---NDIAIAFSGAEDVVLI-EYAK 93 (430)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~i~~~~~~~~---~~i~vs~SGGKDS~vl-~l~~ 93 (430)
+|+++++.| +..+...+...........+.+++... ++ +|++++++|+ ++++|||||||||+|| ||+.
T Consensus 2 ~~~~~c~~c-----~~~~~~~~~~~~~~~l~~~~~e~i~~~--~~~il~~~~~~~~~~~~~i~vafSGGKDS~VLL~L~~ 74 (306)
T 2wsi_A 2 QLSKAAEMC-----YEITNSYLHIDQKSQIIASTQEAIRLT--RKYLLSEIFVRWSPLNGEISFSYNGGKDCQVLLLLYL 74 (306)
T ss_dssp CHHHHHHHH-----HHHHHHHHTCCCSCHHHHHHHHHHHHH--HHHHHHTTTTTSCSSSSSEEEECCSCHHHHHHHHHHH
T ss_pred CHHHHHHHH-----HHHHHHHHHhCchHHHHHHHHHHHHHH--HHHHHHHHHHHcccccCCEEEEecCCHHHHHHHHHHH
Confidence 567777888 434444443332222244444445432 55 8888899887 5799999999999776 7776
Q ss_pred hc----------------------CCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHHHHHhcCCCCCC
Q 042284 94 LT----------------------GRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRTKGLFSFY 151 (430)
Q Consensus 94 ~~----------------------~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~~ 151 (430)
++ .++++++|+|||.+||||++|+++++++||++++++.++... . ..+
T Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet~~fv~~~~~~ygl~l~v~~~~~~~------~---~~l- 144 (306)
T 2wsi_A 75 SCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTLENFVLETSERYCLSLYESQRQSGA------S---VNM- 144 (306)
T ss_dssp HHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHHHHHHHHHHHHTTEEEEECCC--------------CCH-
T ss_pred HHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc------c---ccH-
Confidence 64 467999999999999999999999999999999888776320 0 000
Q ss_pred ccchhhhhhhhchHHHHHHHhcCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEecccccchHHHHHHHH
Q 042284 152 EDGHQECCRIRKVRPLKRALKGLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQDIWNFLR 231 (430)
Q Consensus 152 ~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~ 231 (430)
...+...+|+.| ..+++++|+|++|+. .|+...+...+ .+|+++++++||++|++.|||.||+
T Consensus 145 ---~~~~~~~~k~~p------~~~aii~G~Rrdds~-~r~l~~~~~~d-------~~~p~~~ri~PL~dWt~~DVw~Yi~ 207 (306)
T 2wsi_A 145 ---ADAFRDFIKIYP------ETEAIVIGIRHTDPF-GEALKPIQRTD-------SNWPDFMRLQPLLHWDLTNIWSFLL 207 (306)
T ss_dssp ---HHHHHHHHHHCT------TCCEEECCCCCCSSS-CCCCCSEEECC-------TTSCSCEEECTTTTCCHHHHHHHHH
T ss_pred ---HHHHHHHHhhCC------CCcEEEEEEeccccc-ccccCceeccC-------CCCCCcEEEeChHHCCHHHHHHHHH
Confidence 111223345544 567999999999996 77665543333 2456789999999999999999999
Q ss_pred HcCCCCccccccCCcccCCcCCCCCCCC---CCccccCCCcCCC
Q 042284 232 AMNIPINSLHSQGYISIGCEPCTRPVLP---GQHEREGRWWWED 272 (430)
Q Consensus 232 ~~~lp~~pLY~~Gy~siGC~~Ct~~~~~---~~~~r~grw~~~~ 272 (430)
.++|||||||++||+||||++||+|... +++.+.+||||+-
T Consensus 208 ~~~lpy~pLYd~GY~SiGc~~cT~pnp~l~~~~~~~~~~~~we~ 251 (306)
T 2wsi_A 208 YSNEPICGLYGKGFTSIGGINNSLPNPHLRKDSNNPALHFEWEI 251 (306)
T ss_dssp HHCCCBCHHHHTTCSSCCCTTTBCSCGGGBGGGCCCCCSCHHHH
T ss_pred HcCCCCChhHhcCCCcCCcccCCCcCHHHhcccccccccccccc
Confidence 9999999999999999999999997642 4456789999983
No 7
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=100.00 E-value=2.8e-39 Score=297.82 Aligned_cols=195 Identities=22% Similarity=0.348 Sum_probs=169.2
Q ss_pred ChhhHHHHHHhccCCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 042284 45 DHEDYEKLARGMESASPLEIMDKAFQKFGNDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKH 123 (430)
Q Consensus 45 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~ 123 (430)
+..+++.++.+++.++++++|+++++.|+++++|+|||||||++| +|+.+...++.++|+|||.++|++++|+++++++
T Consensus 16 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~v~Va~SGGkDS~vLL~ll~~~~~~v~~v~vd~g~~~~e~~~~v~~~~~~ 95 (215)
T 1sur_A 16 RILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDK 95 (215)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHCCSEEEEECCCCTTHHHHHHHHHHHSTTCEEEEEECSCBCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhccCCHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Confidence 456788999999999999999999999987899999999999776 8888888899999999999999999999999999
Q ss_pred hCCcEEEEccCchHHHHHHHhcCCCCCCc--cchhhhhhhhchHHHHHHHhcCc--eEEEeeeccCCcccccCCCeeeec
Q 042284 124 YGIRIEYTFPNAVEVQALVRTKGLFSFYE--DGHQECCRIRKVRPLKRALKGLR--AWITGQRKDQSPGTRAEIPVVQID 199 (430)
Q Consensus 124 ~gl~i~~~~p~~~~~~~~~~~~g~~~~~~--~~~~~cc~~~K~~pl~~~~~~~~--~~i~G~R~~Es~~~R~~~~~~~~d 199 (430)
||++++++.++.. +.......| ..+.. ...++||..+|+.|+.+++++.. +|++|+|++|+. .|..++.++..
T Consensus 96 ~gi~~~v~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~i~~G~r~dd~~-~r~~~~~~~~~ 172 (215)
T 1sur_A 96 LKLNLKVYRATES-AAWQEARYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAIQ 172 (215)
T ss_dssp TTCEEEEEECSSC-HHHHHHHHC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTEEEEECCCCTTSSS-TTTTCCSEEEE
T ss_pred hCCcEEEEeCCCC-HHHHHHhcC-CCCCCCccHHHHHHHHHHHHHHHHHHHhcCCceEEEEeehhhhh-hhcCCCccccC
Confidence 9999999988764 334444555 22222 13468999999999999998664 799999999996 89888876532
Q ss_pred CCCCcccCCCCCeEEEecccccchHHHHHHHHHcCCCCccccccCCcccCCcC
Q 042284 200 TSFEGIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIPINSLHSQGYISIGCEP 252 (430)
Q Consensus 200 ~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp~~pLY~~Gy~siGC~~ 252 (430)
++..+++||++|+++|||.|++++||||||||++||+|+||+|
T Consensus 173 ----------~~~~~i~PLl~~t~~dI~~y~~~~~lp~~~lY~~Gy~siGC~p 215 (215)
T 1sur_A 173 ----------RGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTH 215 (215)
T ss_dssp ----------TTEEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSCCCBCC
T ss_pred ----------CCEEEEechHhCCHHHHHHHHHHhCCCCChHHhCCCCCCCCCC
Confidence 2478899999999999999999999999999999999999986
No 8
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.86 E-value=3.6e-21 Score=156.22 Aligned_cols=103 Identities=20% Similarity=0.367 Sum_probs=88.9
Q ss_pred ceEcc-cchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 320 LVSFR-RTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 320 v~~lt-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
|.+++ .++|++.+. ...+++++|+|||+||++|+.+.|.++++++.+++ +.|++||++++ ++++ ++|+|.++||
T Consensus 2 V~~i~~~~~f~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~-~~l~-~~~~V~~~PT 76 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLN-EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDEC-EDIA-QDNQIACMPT 76 (105)
T ss_dssp CEECCSHHHHHHHHH-HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTC-HHHH-HHTTCCBSSE
T ss_pred eEEeCCHHHHHHHHH-hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccC-HHHH-HHcCCCeecE
Confidence 45554 478999876 34578999999999999999999999999999876 99999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHhC
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNALR 430 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~~ 430 (430)
+++|++|+. ...+.| .+.++|.++|++.|
T Consensus 77 ~~~~~~G~~-v~~~~G--~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 77 FLFMKNGQK-LDSLSG--ANYDKLLELVEKNK 105 (105)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHHC
T ss_pred EEEEECCEE-EEEEeC--cCHHHHHHHHHhcC
Confidence 999999984 344445 58999999999864
No 9
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.84 E-value=3.7e-20 Score=155.12 Aligned_cols=108 Identities=14% Similarity=0.380 Sum_probs=96.0
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC----CCeEEEEEEcCCCchHHHHHhCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG----MGVKVGKFRADGDHKEFAKQKLQ 392 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~Vd~~~~~~~l~~~~~~ 392 (430)
++.|.+|++++|++.+. +.+++++|+|||+||++|+.+.|.|+++++.+.. .++.|+.||++++ ++++ ++|+
T Consensus 14 ~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~ 89 (127)
T 3h79_A 14 PSRVVELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY-PDVI-ERMR 89 (127)
T ss_dssp CCCCEECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC-HHHH-HHTT
T ss_pred CCceEECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc-HhHH-HhcC
Confidence 36799999999999874 4589999999999999999999999999988742 3699999999999 9999 9999
Q ss_pred CCCCCEEEEEeCCCcc-eeecCCCCCCHHHHHHHHHHh
Q 042284 393 LVSFPTILFFPKHSAK-PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 V~~~Ptl~~~~~g~~~-~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|.++||+++|++|+.. ...|.| .++.++|.+||+++
T Consensus 90 v~~~Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSGFPTMRYYTRIDKQEPFEYSG-QRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSSSEEEEECSSCSSSCEECCS-CCCHHHHHHHHHHH
T ss_pred CccCCEEEEEeCCCCCCceEecC-CccHHHHHHHHHhc
Confidence 9999999999998753 367887 69999999999875
No 10
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.82 E-value=4.6e-20 Score=157.67 Aligned_cols=106 Identities=11% Similarity=0.125 Sum_probs=90.2
Q ss_pred CceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 319 KLVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 319 ~v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
-|..|+. ++|++.+. .+.+++|||+|||+||++|+.+.|.|+++++++++ ++.|++||+|++ ++++ ++|+|.++|
T Consensus 22 mv~~l~t~~~f~~~v~-~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~-~e~a-~~y~V~siP 97 (160)
T 2av4_A 22 MLQHLNSGWAVDQAIV-NEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV-PDFN-TMYELYDPV 97 (160)
T ss_dssp CCEECCSHHHHHHHHH-HCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TTTTCCSSE
T ss_pred hhhccCCHHHHHHHHH-hcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCCCCCC
Confidence 3667765 88988763 24678999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcce-e-------ecCCCCCC-HHHHHHHHHHh
Q 042284 398 TILFFPKHSAKP-V-------KYPSEKRD-VDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~-~-------~~~gg~~~-~~~l~~~i~~~ 429 (430)
|+++|++|+... . +..| ... .++|.++|+++
T Consensus 98 T~~fFk~G~~v~vd~Gtgd~~k~vG-a~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 98 SVMFFYRNKHMMIDLGTGNNNKINW-PMNNKQEFIDIVETI 137 (160)
T ss_dssp EEEEEETTEEEEEECSSSCCSCBCS-CCCCHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecCCCCcCeEEe-ecCCHHHHHHHHHHH
Confidence 999999998421 2 4555 555 89999998864
No 11
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.82 E-value=3.3e-20 Score=156.08 Aligned_cols=105 Identities=9% Similarity=0.156 Sum_probs=91.4
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCC--HhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWC--HFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC--~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
.....+|+++|++.+. +.++++||+|||+|| ++|+.+.|++++++++|.+ ++.|++||+|++ ++++ .+|+|++
T Consensus 15 ~g~~~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~-~~la-~~ygV~s 89 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAE-RGLM-ARFGVAV 89 (137)
T ss_dssp --CEEECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGH-HHHH-HHHTCCS
T ss_pred cCCcccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCCcc
Confidence 4566899999999885 344599999999999 9999999999999999987 899999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. +....|..+.++|.++|+++
T Consensus 90 iPTlilFkdG~~--v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 90 CPSLAVVQPERT--LGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp SSEEEEEECCEE--EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEE--EEEEeCCCCHHHHHHHHHHH
Confidence 999999999994 44433478899999999864
No 12
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.81 E-value=2.5e-20 Score=157.39 Aligned_cols=103 Identities=10% Similarity=0.079 Sum_probs=92.3
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCC--CHhHHHHHHHHHHHHHHHcCCC-eEEEEEEcCCCchHHHHHhCCCCC
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPW--CHFCQAMEGSYIELAEQLEGMG-VKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~w--C~~C~~~~p~~~~la~~~~~~~-v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
.+..+++++|++.+. .+++|||+|||+| |++|+.+.|++++++++|.+ + +.|++||+|++ ++++ .+|+|++
T Consensus 18 g~~~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g-~~v~~~KVdvDe~-~~lA-~~ygV~s 91 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD-YTWQVAIADLEQS-EAIG-DRFGAFR 91 (140)
T ss_dssp TCEECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT-SCCEEEECCHHHH-HHHH-HHHTCCS
T ss_pred CCccCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC-CeEEEEEEECCCC-HHHH-HHcCCcc
Confidence 567899999999885 7789999999999 99999999999999999988 7 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. +....|..+.++|.++|+++
T Consensus 92 IPTlilFk~G~~--v~~~~G~~~k~~l~~~i~~~ 123 (140)
T 2qgv_A 92 FPATLVFTGGNY--RGVLNGIHPWAELINLMRGL 123 (140)
T ss_dssp SSEEEEEETTEE--EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEE--EEEEecCCCHHHHHHHHHHH
Confidence 999999999994 44333478899999999864
No 13
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.80 E-value=5.4e-19 Score=143.71 Aligned_cols=105 Identities=19% Similarity=0.299 Sum_probs=94.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..|.+++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 78 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIY--DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEE-KTLF-QRFSLKGVP 78 (111)
T ss_dssp CCSEECCHHHHHHHHT--TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSSC
T ss_pred CcceecCHHHHHHHHH--hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcC-hhHH-HhcCCCcCC
Confidence 4689999999999873 3689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 79 t~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 79 QILYFKDGEY-KGKMAG-DVEDDEVEQMIADV 108 (111)
T ss_dssp EEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEec-cCCHHHHHHHHHHH
Confidence 9999998874 445656 68999999999875
No 14
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.80 E-value=6.2e-19 Score=155.48 Aligned_cols=108 Identities=12% Similarity=0.243 Sum_probs=92.7
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeC-------CCCHhHHHHHHHHHHHHHHHc-----CCCeEEEEEEcCCCch
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYA-------PWCHFCQAMEGSYIELAEQLE-----GMGVKVGKFRADGDHK 384 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya-------~wC~~C~~~~p~~~~la~~~~-----~~~v~~~~Vd~~~~~~ 384 (430)
++.|++||++||++++. .+.+.+|||+||| +||++|+.+.|+|+++++.+. + ++.|++||++++ +
T Consensus 17 ~~~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~-~v~f~kvD~d~~-~ 93 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS-LNLFFTVDVNEV-P 93 (178)
T ss_dssp TTSEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEEETTTC-H
T ss_pred cCCCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC-CEEEEEEECccC-H
Confidence 45799999999999774 2346789999999 499999999999999999997 5 799999999999 9
Q ss_pred HHHHHhCCCCCCCEEEEEeCCCcce-----------eec--C-CCCCCHHHHHHHHHH
Q 042284 385 EFAKQKLQLVSFPTILFFPKHSAKP-----------VKY--P-SEKRDVDSLMAFVNA 428 (430)
Q Consensus 385 ~l~~~~~~V~~~Ptl~~~~~g~~~~-----------~~~--~-gg~~~~~~l~~~i~~ 428 (430)
+++ ++|+|+++||+++|++|+... ..| . +..++++.|.+||.+
T Consensus 94 ~la-~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 94 QLV-KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp HHH-HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHH
T ss_pred HHH-HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHH
Confidence 999 999999999999999997533 334 1 225899999999975
No 15
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=7.9e-19 Score=147.23 Aligned_cols=112 Identities=26% Similarity=0.536 Sum_probs=97.9
Q ss_pred CCCCCC-CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHh
Q 042284 312 SDLFNS-QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQK 390 (430)
Q Consensus 312 ~~~~~~-~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~ 390 (430)
..++.. +.|.+++.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ .+.|+.||++++ ++++ ++
T Consensus 10 ~~l~~~~~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~ 84 (130)
T 2dml_A 10 SGLYSSSDDVIELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKH-QSLG-GQ 84 (130)
T ss_dssp CCSSCTTSSSEECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HH
T ss_pred ccccCCCCCcEECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCC-HHHH-HH
Confidence 344443 6799999999999653 4688999999999999999999999999999987 699999999999 9999 99
Q ss_pred CCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 391 LQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 391 ~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+|.++||+++|++|+.....+.| ..+.++|.+||.+.
T Consensus 85 ~~v~~~Pt~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 85 YGVQGFPTIKIFGANKNKPEDYQG-GRTGEAIVDAALSA 122 (130)
T ss_dssp HTCCSSSEEEEESSCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCCeEEEeec-CCCHHHHHHHHHHH
Confidence 999999999999988865667777 68999999998763
No 16
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.79 E-value=9.6e-19 Score=141.51 Aligned_cols=104 Identities=23% Similarity=0.421 Sum_probs=94.6
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.|..++.++|++++. ++++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~P 77 (109)
T 3tco_A 4 DVTLVLTEENFDEVIR---NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDEN-QKIA-DKYSVLNIP 77 (109)
T ss_dssp CCCEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CeEEEecHHHHHHHHh---cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccC-HHHH-HhcCcccCC
Confidence 5789999999999886 689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|.+|+. ...+.| ..+.++|.++|+++
T Consensus 78 t~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 78 TTLIFVNGQL-VDSLVG-AVDEDTLESTVNKY 107 (109)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEcCCcE-EEeeec-cCCHHHHHHHHHHH
Confidence 9999988874 445656 68999999999876
No 17
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.1e-18 Score=148.38 Aligned_cols=104 Identities=25% Similarity=0.506 Sum_probs=95.0
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCC--CeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGM--GVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~--~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
..|..++.++|++++. .++++||+||++||++|+.+.|.|+++++.+++. ++.|+.||++++ .+++ ++|+|.+
T Consensus 17 ~~v~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~ 91 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA-SMLA-SKFDVSG 91 (140)
T ss_dssp TTEEECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC-HHHH-HHTTCCS
T ss_pred CCCEEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc-HHHH-HHCCCCc
Confidence 6799999999999875 6899999999999999999999999999999873 499999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+ ...+.| ..+.++|.+||+++
T Consensus 92 ~Pt~~~~~~G~--~~~~~g-~~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 92 YPTIKILKKGQ--AVDYDG-SRTQEEIVAKVREV 122 (140)
T ss_dssp SSEEEEEETTE--EEECCS-CCCHHHHHHHHHHH
T ss_pred cCeEEEEECCc--EEEcCC-CCCHHHHHHHHHHh
Confidence 99999998887 677777 68999999999875
No 18
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.78 E-value=1.7e-18 Score=140.17 Aligned_cols=105 Identities=20% Similarity=0.393 Sum_probs=92.9
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.|++++.++|++.+ .+.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~f~~~~--~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (108)
T 2trx_A 2 DKIIHLTDDSFDTDV--LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 76 (108)
T ss_dssp TTEEECCTTTHHHHT--TTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-TTHH-HHTTCCSSS
T ss_pred CcceecchhhHHHHH--HhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCcccC
Confidence 468999999999765 34789999999999999999999999999999987 699999999999 8999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 77 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 106 (108)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCEE-EEEEec-CCCHHHHHHHHHHh
Confidence 9999988873 344555 68999999999875
No 19
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.78 E-value=1.7e-18 Score=139.41 Aligned_cols=103 Identities=19% Similarity=0.302 Sum_probs=93.2
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..+.+++.++|++.+ .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 75 (106)
T 3die_A 3 MAIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEG-KADILKLDVDEN-PSTA-AKYEVMSIP 75 (106)
T ss_dssp CCCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred cceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEECCcC-HHHH-HhCCCcccC
Confidence 468999999999976 689999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 3die_A 76 TLIVFKDGQP-VDKVVG-FQPKENLAEVLDKH 105 (106)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEEeCCeE-EEEEeC-CCCHHHHHHHHHHh
Confidence 9999998874 445556 68999999999875
No 20
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.78 E-value=1.3e-18 Score=148.08 Aligned_cols=109 Identities=20% Similarity=0.401 Sum_probs=93.9
Q ss_pred CCCCceEcccchHHHHHHhcC---------CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHH
Q 042284 316 NSQKLVSFRRTGIENLARLQN---------REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEF 386 (430)
Q Consensus 316 ~~~~v~~lt~~~f~~~i~~~~---------~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l 386 (430)
.++.|+.++.++|+..+...+ .++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ +++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~ 97 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKE-PEL 97 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCC-HHH
Confidence 446899999999999875322 479999999999999999999999999999987 799999999999 999
Q ss_pred HHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 387 AKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 387 ~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+ ++|+|.++||+++|+.++. ...+.| ..+.++|.++|+++
T Consensus 98 ~-~~~~v~~~Pt~~~~~~~g~-~~~~~G-~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 98 A-RDFGIQSIPTIWFVPMKGE-PQVNMG-ALSKEQLKGYIDKV 137 (141)
T ss_dssp H-HHTTCCSSSEEEEECSSSC-CEEEES-CCCHHHHHHHHHHT
T ss_pred H-HHcCCCCcCEEEEEeCCCC-EEEEeC-CCCHHHHHHHHHHH
Confidence 9 9999999999999965554 446666 68999999999876
No 21
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.78 E-value=2.8e-18 Score=138.36 Aligned_cols=106 Identities=19% Similarity=0.327 Sum_probs=93.8
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.|+++++++|++.+ .+.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDV--LKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDN-PETP-NAYQVRSIP 76 (107)
T ss_dssp CCEEECCTTTHHHHT--TTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTC-CHHH-HHTTCCSSS
T ss_pred CceeecchhhhhHHH--HhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCC-HHHH-HhcCCCccC
Confidence 468999999999865 34789999999999999999999999999999987 799999999999 8999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHhC
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNALR 430 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~~ 430 (430)
|+++|++|+. ...+.| ..+.++|.++|+++.
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 77 TLMLVRDGKV-IDKKVG-ALPKSQLKAWVESAQ 107 (107)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHTC
T ss_pred EEEEEeCCEE-EEEecC-CCCHHHHHHHHHhcC
Confidence 9999988874 344555 689999999998763
No 22
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.78 E-value=1.7e-18 Score=139.37 Aligned_cols=102 Identities=21% Similarity=0.394 Sum_probs=90.7
Q ss_pred ceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEE
Q 042284 320 LVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTI 399 (430)
Q Consensus 320 v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl 399 (430)
|+++++++|++++. .+++++|+||++||++|+.+.|.++++++.+++ ++.++.||++++ ++++ ++|+|.++||+
T Consensus 2 v~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 75 (105)
T 1nsw_A 2 TMTLTDANFQQAIQ---GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDEN-PETT-SQFGIMSIPTL 75 (105)
T ss_dssp CEEECTTTHHHHHS---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceeccHHhHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCC-HHHH-HHcCCccccEE
Confidence 78899999997664 778999999999999999999999999999987 699999999999 9999 99999999999
Q ss_pred EEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 400 LFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 400 ~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 ~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 76 ILFKGGRP-VKQLIG-YQPKEQLEAQLADV 103 (105)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHTTTT
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHHH
Confidence 99988873 344555 68899999998765
No 23
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.1e-18 Score=145.06 Aligned_cols=105 Identities=26% Similarity=0.574 Sum_probs=93.8
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHc----CCCeEEEEEEcCCCchHHHHHhCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLE----GMGVKVGKFRADGDHKEFAKQKLQL 393 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~----~~~v~~~~Vd~~~~~~~l~~~~~~V 393 (430)
..|..++.++|++.+. +.++++||+||++||++|+.+.|.|+++++.++ + ++.|+.||++++ ++++ ++|+|
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v 81 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVL--DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG-KVKLAAVDATVN-QVLA-SRYGI 81 (133)
T ss_dssp CSCEECCTTHHHHHTT--TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT-SEEEEEEETTTC-CHHH-HHHTC
T ss_pred CcCEEcCHhhHHHHHh--cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC-cEEEEEEECCCC-HHHH-HhCCC
Confidence 5699999999999763 468899999999999999999999999999997 5 799999999999 8999 99999
Q ss_pred CCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 82 ~~~Pt~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 82 RGFPTIKIFQKGES-PVDYDG-GRTRSDIVSRALDL 115 (133)
T ss_dssp CSSSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred CeeCeEEEEeCCCc-eEEecC-CCCHHHHHHHHHHH
Confidence 99999999999773 566766 68999999999864
No 24
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.77 E-value=2.9e-18 Score=139.20 Aligned_cols=104 Identities=24% Similarity=0.507 Sum_probs=93.0
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC--CCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG--MGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
+.|..+++++|++.+. +++++|+||++||++|+.+.|.++++++.+.. .++.|+.||++++ ++++ ++|+|.+
T Consensus 5 ~~v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~v~~ 78 (111)
T 3uvt_A 5 STVLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE-RNIC-SKYSVRG 78 (111)
T ss_dssp CCSEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc-HhHH-HhcCCCc
Confidence 5799999999999885 67999999999999999999999999988763 2699999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. ...+.| ..+.++|.+||++.
T Consensus 79 ~Pt~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 79 YPTLLLFRGGKK-VSEHSG-GRDLDSLHRFVLSQ 110 (111)
T ss_dssp SSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred ccEEEEEeCCcE-EEeccC-CcCHHHHHHHHHhc
Confidence 999999998874 456666 68999999999874
No 25
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.77 E-value=1.8e-18 Score=141.49 Aligned_cols=102 Identities=22% Similarity=0.320 Sum_probs=91.8
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
.|++++.++|++.+ .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 74 (112)
T 2voc_A 2 AIVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDEN-QETA-GKYGVMSIPT 74 (112)
T ss_dssp CCEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTC-CSHH-HHTTCCSBSE
T ss_pred CeEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCCcccE
Confidence 47889999999976 688999999999999999999999999999987 799999999999 8999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| ..+.++|.+||++.
T Consensus 75 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 75 LLVLKDGEV-VETSVG-FKPKEALQELVNKH 103 (112)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999988873 445656 68999999999865
No 26
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3e-18 Score=143.08 Aligned_cols=102 Identities=21% Similarity=0.456 Sum_probs=91.1
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.|+++++++|+++++ +.++|+|||+||++|+.+.|.|+++++.+++.++.|+.||++++ ++++ ++|+|.++|
T Consensus 7 ~~v~~l~~~~f~~~~~-----~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~P 79 (126)
T 1x5e_A 7 GNVRVITDENWRELLE-----GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ-PGLS-GRFIINALP 79 (126)
T ss_dssp CSEEECCTTTHHHHTS-----SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccEEecHHHHHHHhC-----CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC-HHHH-HHcCCcccC
Confidence 5799999999998763 24999999999999999999999999998754699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+ ...+.| ..+.++|.+||+++
T Consensus 80 t~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 80 TIYHCKDGE--FRRYQG-PRTKKDFINFISDK 108 (126)
T ss_dssp EEEEEETTE--EEECCS-CCCHHHHHHHHHTC
T ss_pred EEEEEeCCe--EEEeec-CCCHHHHHHHHHHH
Confidence 999998887 567777 68999999999864
No 27
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.77 E-value=3.5e-18 Score=143.00 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=91.0
Q ss_pred CCCceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 317 SQKLVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 317 ~~~v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
...|.++++ ++|++++. .++++||+|||+||++|+.+.|.|+++++.++ ++.|+.||++++ ++++ ++|+|.+
T Consensus 18 ~~mv~~l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~-~~l~-~~~~v~~ 90 (125)
T 1r26_A 18 YPSVVDVYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNN-SEIV-SKCRVLQ 90 (125)
T ss_dssp CSCCEEECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTC-HHHH-HHTTCCS
T ss_pred ccceEECCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCC-HHHH-HHcCCCc
Confidence 345899999 99999885 88999999999999999999999999999985 499999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 91 ~Pt~~i~~~G~~-~~~~~G--~~~~~l~~~l~~~ 121 (125)
T 1r26_A 91 LPTFIIARSGKM-LGHVIG--ANPGMLRQKLRDI 121 (125)
T ss_dssp SSEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 999999998873 344555 5889999999875
No 28
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.77 E-value=3.4e-18 Score=138.10 Aligned_cols=103 Identities=18% Similarity=0.344 Sum_probs=92.5
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
.|++++.++|+++++ .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (109)
T 2yzu_A 2 KPIEVTDQNFDETLG---QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDEN-PKTA-MRYRVMSIPT 75 (109)
T ss_dssp CCEECCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred cceEccHhHHHHHhc---CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCC-HhHH-HhCCCCcCCE
Confidence 588999999998775 688999999999999999999999999999987 699999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 76 VILFKDGQP-VEVLVG-AQPKRNYQAKIEKH 104 (109)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCcE-eeeEeC-CCCHHHHHHHHHHH
Confidence 999988873 344556 68899999999875
No 29
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.77 E-value=1.5e-18 Score=143.03 Aligned_cols=104 Identities=18% Similarity=0.274 Sum_probs=91.0
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.+...+.++|++++.. ..+++++|+|||+||++|+.+.|.|+++++.+++ +.|+.||++++ ++++ ++|+|.++|
T Consensus 12 ~~~~~~t~~~f~~~l~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~-~~l~-~~~~v~~~P 86 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDA-AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SECEVKSMP 86 (116)
T ss_dssp CCBCCCCHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred cccCCCCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCcccc
Confidence 35666788999998852 3689999999999999999999999999999876 99999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 87 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 87 TFQFFKKGQK-VGEFSG-A-NKEKLEATINEL 115 (116)
T ss_dssp EEEEESSSSE-EEEEES-C-CHHHHHHHHHHH
T ss_pred EEEEEeCCeE-EEEEcC-C-CHHHHHHHHHHh
Confidence 9999988874 445556 5 999999999876
No 30
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.77 E-value=4.7e-18 Score=146.12 Aligned_cols=104 Identities=16% Similarity=0.396 Sum_probs=94.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..++.++.++|++++. .+++++|+||++||++|+.+.|.|+++++.+.+ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 38 ~~v~~l~~~~~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v~~~P 111 (148)
T 3p2a_A 38 GEVINATAETLDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAE-PALS-TRFRIRSIP 111 (148)
T ss_dssp CCCEECCTTTHHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CCceecCHHHHHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCC-HHHH-HHCCCCccC
Confidence 5799999999999874 889999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 112 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 112 TIMLYRNGKM-IDMLNG-AVPKAPFDNWLDEQ 141 (148)
T ss_dssp EEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred EEEEEECCeE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999998874 445666 68999999999865
No 31
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.77 E-value=4.9e-18 Score=138.41 Aligned_cols=106 Identities=16% Similarity=0.312 Sum_probs=93.0
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
+..|..++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++
T Consensus 4 ~~~v~~l~~~~~~~~~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~ 78 (112)
T 1t00_A 4 AGTLKHVTDDSFEQDVL--KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDEN-PGTA-AKYGVMSI 78 (112)
T ss_dssp SCCCEEECTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceEEecchhhHHHHHh--hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCC-HHHH-HhCCCCcc
Confidence 34689999999988553 4689999999999999999999999999999977 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 79 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 79 PTLNVYQGGEV-AKTIVG-AKPKAAIVRDLEDF 109 (112)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHTHHH
T ss_pred cEEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 99999988874 344555 68899999999875
No 32
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.77 E-value=1.8e-18 Score=147.47 Aligned_cols=106 Identities=19% Similarity=0.339 Sum_probs=93.9
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
...|.++++++|++.+ .+.++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ ++++ ++|+|.++
T Consensus 5 ~~~v~~l~~~~f~~~~--~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 79 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQV--EDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATN-PWTA-EKYGVQGT 79 (140)
T ss_dssp TTTEEEECHHHHHHHT--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTC-HHHH-HHHTCCEE
T ss_pred CcceEEcchHhHHHHH--HhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcC-HhHH-HHCCCCcC
Confidence 3579999999999644 24789999999999999999999999999999988 799999999999 9999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 80 PTFKFFCHGRP-VWEQVG-QIYPSILKNAVRDM 110 (140)
T ss_dssp SEEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred CEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99999998874 445666 68999999999864
No 33
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.77 E-value=3.5e-18 Score=148.46 Aligned_cols=104 Identities=21% Similarity=0.447 Sum_probs=93.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..+++++.++|++.+ +.++++||+||++||++|+.+.|.|+++++.+++ ++.|++||++++ ++++ ++|+|.++|
T Consensus 47 ~~~~~l~~~~f~~~~---~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~-~~l~-~~~~i~~~P 120 (155)
T 2ppt_A 47 GKVAGIDPAILARAE---RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAH-PAVA-GRHRIQGIP 120 (155)
T ss_dssp SSEEECCHHHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTS-THHH-HHTTCCSSS
T ss_pred CCCccCCHHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCcc-HHHH-HHcCCCcCC
Confidence 468899999999977 3789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 121 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 121 AFILFHKGRE-LARAAG-ARPASELVGFVRGK 150 (155)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCeE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999998874 344555 68999999999875
No 34
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.76 E-value=4.1e-18 Score=140.96 Aligned_cols=106 Identities=22% Similarity=0.376 Sum_probs=93.6
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
.+.+..+++++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ ++++ ++|+|.++
T Consensus 12 ~~~~~~~~~~~f~~~v~--~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~ 86 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVV--NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDH-TDLA-IEYEVSAV 86 (119)
T ss_dssp CSEEECCSHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTT-HHHH-HHTTCCSS
T ss_pred ceEEEecChhhHHHHHH--cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCC-HHHH-HHcCCCcc
Confidence 35799999999999653 4688999999999999999999999999999977 799999999999 9999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 87 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 87 PTVLAMKNGDV-VDKFVG-IKDEDQLEAFLKKL 117 (119)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred cEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99999988873 345555 67999999999875
No 35
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.76 E-value=4.6e-18 Score=144.16 Aligned_cols=106 Identities=20% Similarity=0.374 Sum_probs=93.0
Q ss_pred CCceEcccchHHHHHHhc---------CCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHH
Q 042284 318 QKLVSFRRTGIENLARLQ---------NREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK 388 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~---------~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~ 388 (430)
..|+++++++|++.+... +.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ ++++
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~- 85 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKE-QELA- 85 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCC-HHHH-
Confidence 569999999999976421 1568999999999999999999999999999987 699999999999 9999
Q ss_pred HhCCCCCCCEEEEE-eCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 389 QKLQLVSFPTILFF-PKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~~~Ptl~~~-~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|+|.++||+++| ++|+ ...+.| ..+.++|.++|+++
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGK--PEMAQG-AMPKASFKKAIDEF 124 (136)
T ss_dssp HHTTCCSSCEEEEECSSSC--CEEEES-CCCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCCc--EEEEeC-CCCHHHHHHHHHHH
Confidence 99999999999999 6676 446666 68999999999875
No 36
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.76 E-value=4.7e-18 Score=137.28 Aligned_cols=104 Identities=19% Similarity=0.315 Sum_probs=92.1
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
.|.++++++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.++.||++.+ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (107)
T 1dby_A 2 EAGAVNDDTFKNVVL--ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDES-PNVA-SEYGIRSIPT 76 (107)
T ss_dssp CCEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHHTCCSSCE
T ss_pred ccEeccHHHHHHHHh--cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCC-HHHH-HHCCCCcCCE
Confidence 478899999999653 4689999999999999999999999999999987 699999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 77 IMVFKGGKK-CETIIG-AVPKATIVQTVEKY 105 (107)
T ss_dssp EEEESSSSE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999988874 344555 68899999999876
No 37
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.76 E-value=6.1e-18 Score=137.74 Aligned_cols=101 Identities=18% Similarity=0.275 Sum_probs=88.3
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
.....+.++|++++. ++++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++ ++++ ++|+|.++||
T Consensus 8 ~~~~~~~~~f~~~~~---~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~-~~l~-~~~~v~~~Pt 80 (109)
T 3f3q_A 8 VTQFKTASEFDSAIA---QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDEL-GDVA-QKNEVSAMPT 80 (109)
T ss_dssp CEECCSHHHHHHHTT---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ccCCCCHHHHHHHHh---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCCccCE
Confidence 345557789998775 799999999999999999999999999999976 99999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| . +.++|.++|+++
T Consensus 81 ~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 81 LLLFKNGKE-VAKVVG-A-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEEECCEE-EEEEeC-C-CHHHHHHHHHhh
Confidence 999998873 445555 3 789999999876
No 38
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.76 E-value=5.3e-18 Score=138.33 Aligned_cols=106 Identities=10% Similarity=0.266 Sum_probs=87.0
Q ss_pred CceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 319 KLVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 319 ~v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
.|.++++ ++|++++.....+++++|+||++||++|+.+.|.++++++.++..++.|+.||++++ ++++ ++|+|.++|
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~~P 78 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN-SEIS-ELFEISAVP 78 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC-HHHH-HHcCCCccc
Confidence 3678887 999998862234899999999999999999999999999986433699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 79 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 79 YFIIIHKGTI-LKELSG-A-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEEETTEE-EEEECS-C-CHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEecC-C-CHHHHHHHHHHH
Confidence 9999988873 445555 3 566799998865
No 39
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.76 E-value=3.3e-18 Score=143.65 Aligned_cols=106 Identities=20% Similarity=0.362 Sum_probs=93.5
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
+..|++++.++|++.+ .+.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++
T Consensus 21 ~~~v~~l~~~~f~~~~--~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 95 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDV--LKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGI 95 (128)
T ss_dssp CCCSEEECTTTHHHHT--TTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC-CTTS-GGGTCCSS
T ss_pred ccccEecChhhHHHHH--HhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCcc
Confidence 3569999999999865 35789999999999999999999999999999987 699999999999 8999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 96 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 96 PTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 126 (128)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CEEEEEeCCEE-EEEEcC-CCCHHHHHHHHHHh
Confidence 99999988873 344555 68999999999875
No 40
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.76 E-value=6.7e-18 Score=137.59 Aligned_cols=104 Identities=20% Similarity=0.357 Sum_probs=90.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC-CCchHHHHHhCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD-GDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~-~~~~~l~~~~~~V~~~ 396 (430)
+.|..++.++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++ .+ ++++ ++|+|.++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~-~~~~-~~~~v~~~ 79 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRVV 79 (111)
T ss_dssp TSEEEECTTTHHHHHT-TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSBS
T ss_pred CccEEechHHHHHHHH-hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcch-HHHH-HHcCCCee
Confidence 5799999999999875 22588999999999999999999999999999875 999999998 56 8999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 80 PTFKILKENSV-VGEVTG-A-KYDKLLEAIQAA 109 (111)
T ss_dssp SEEEEESSSSE-EEEEES-S-CHHHHHHHHHHH
T ss_pred eEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHh
Confidence 99999988874 344555 3 589999999875
No 41
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.76 E-value=9e-18 Score=137.20 Aligned_cols=105 Identities=19% Similarity=0.320 Sum_probs=93.2
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.|.+++.++|++.+ .+.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 7 ~~v~~l~~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~P 81 (115)
T 1thx_A 7 KGVITITDAEFESEV--LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPN-PTTV-KKYKVEGVP 81 (115)
T ss_dssp CSEEECCGGGHHHHT--TTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTC-HHHH-HHTTCCSSS
T ss_pred CceEEeeccchhhHh--hcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCC-HHHH-HHcCCCcee
Confidence 469999999999865 35789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 82 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 82 ALRLVKGEQI-LDSTEG-VISKDKLLSFLDTH 111 (115)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEcCCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999988873 344556 68999999999875
No 42
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.75 E-value=8.1e-18 Score=135.16 Aligned_cols=103 Identities=21% Similarity=0.390 Sum_probs=91.3
Q ss_pred ceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEE
Q 042284 320 LVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTI 399 (430)
Q Consensus 320 v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl 399 (430)
|..++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.++.||++++ ++++ ++|+|.++||+
T Consensus 2 v~~~~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVL--ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA-PGIA-TQYNIRSIPTV 76 (105)
T ss_dssp CEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceechhhhHHHHHh--cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch-HHHH-HhCCCCcccEE
Confidence 67899999999664 4688999999999999999999999999999987 699999999999 9999 99999999999
Q ss_pred EEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 400 LFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 400 ~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 77 LFFKNGER-KESIIG-AVPKSTLTDSIEKY 104 (105)
T ss_dssp EEEETTEE-EEEEEE-CCCHHHHHHHHHHH
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHhh
Confidence 99998874 344555 68899999999875
No 43
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.75 E-value=4.9e-18 Score=140.74 Aligned_cols=106 Identities=21% Similarity=0.449 Sum_probs=91.4
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.|.+++.++|++.+ .+.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~f~~~~--~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~P 77 (122)
T 3aps_A 3 QASIDLTPQTFNEKV--LQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAY-PQTC-QKAGIKAYP 77 (122)
T ss_dssp CCSEECCHHHHHHHT--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred cchhcCCHHHHHHHH--hcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCC-HHHH-HHcCCCccc
Confidence 468999999997643 24789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| +..+.++|.++|+++
T Consensus 78 t~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 78 SVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp EEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHH
T ss_pred eEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHH
Confidence 9999988775 334444 137899999999864
No 44
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.75 E-value=8.2e-18 Score=134.51 Aligned_cols=101 Identities=19% Similarity=0.392 Sum_probs=90.6
Q ss_pred ceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEE
Q 042284 320 LVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTI 399 (430)
Q Consensus 320 v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl 399 (430)
|++++.++|++.+. .+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++ ++++ ++|+|.++||+
T Consensus 1 V~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 73 (104)
T 2e0q_A 1 VIHLDSKNFDSFLA---SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDEN-PDIA-ARYGVMSLPTV 73 (104)
T ss_dssp CEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSCEE
T ss_pred CeecCHHHHHHHHh---cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCC-HHHH-HhCCccccCEE
Confidence 57889999999885 788999999999999999999999999999976 99999999999 9999 99999999999
Q ss_pred EEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 400 LFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 400 ~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 74 ~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 74 IFFKDGEP-VDEIIG-AVPREEIEIRIKNL 101 (104)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEECCeE-hhhccC-CCCHHHHHHHHHHH
Confidence 99988873 345556 68999999999875
No 45
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.75 E-value=1.2e-17 Score=135.15 Aligned_cols=102 Identities=10% Similarity=0.097 Sum_probs=86.7
Q ss_pred ceEc-ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 320 LVSF-RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 320 v~~l-t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
|.++ +.++|++.+.. +.+++++|+||++||++|+.+.|.++++++.++ ++.|+.||++++ ++++ ++|+|.++||
T Consensus 3 v~~i~~~~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~-~~~~-~~~~v~~~Pt 77 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQC-QGTA-ATNNISATPT 77 (107)
T ss_dssp EEEECSGGGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSSSE
T ss_pred eEEecCHHHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccC-HHHH-HhcCCCcccE
Confidence 5556 56899998742 368999999999999999999999999999994 599999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 78 FQFFRNKVR-IDQYQG--ADAVGLEEKIKQH 105 (107)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEECCeE-EEEEeC--CCHHHHHHHHHHh
Confidence 999998874 344555 4556799999875
No 46
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.75 E-value=9.7e-19 Score=141.29 Aligned_cols=97 Identities=13% Similarity=0.172 Sum_probs=74.2
Q ss_pred ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEe
Q 042284 324 RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFP 403 (430)
Q Consensus 324 t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~ 403 (430)
+.++|+++++ .+++++|+|||+||++|+.+.|.++++++.++ ++.|+.||++++ ++++ ++|+|.++||+++|+
T Consensus 7 ~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~-~~l~-~~~~v~~~Pt~~~~~ 79 (105)
T 4euy_A 7 TIEELATYIE---EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDM-QEIA-GRYAVFTGPTVLLFY 79 (105)
T ss_dssp ---CCSSSTT---CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC-----------CCCCEEEEEE
T ss_pred CHHHHHHHHh---cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCC-HHHH-HhcCCCCCCEEEEEe
Confidence 3466666553 78999999999999999999999999999985 599999999999 9999 999999999999999
Q ss_pred CCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 404 KHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 404 ~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|+. ...+.| ..+.++|.++|+++
T Consensus 80 ~G~~-~~~~~g-~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NGKE-ILRESR-FISLENLERTIQLF 103 (105)
T ss_dssp TTEE-EEEEES-SCCHHHHHHHHHTT
T ss_pred CCeE-EEEEeC-CcCHHHHHHHHHHh
Confidence 8873 344555 68999999999875
No 47
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.75 E-value=4.2e-18 Score=140.85 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=85.7
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..|.+++.++|.+.+...+.+++|+|+|||+||++|+.+.|.+++++++|++ +.|++||+++. + ++|+|.++|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~----~-~~~~v~~~P 75 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSC----I-QHYHDNCLP 75 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGT----S-TTCCGGGCS
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHh----H-HHCCCCCCC
Confidence 3588999999999775222345999999999999999999999999999975 99999999865 4 799999999
Q ss_pred EEEEEeCCCcceeecCC------CCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPS------EKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~g------g~~~~~~l~~~i~~~ 429 (430)
|+++|++|+.. ..+.| ...+.++|..+|.+.
T Consensus 76 T~~~fk~G~~v-~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 76 TIFVYKNGQIE-AKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEEEETTEEE-EEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEEEECCEEE-EEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 99999999852 22222 246899999999763
No 48
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.75 E-value=2.8e-18 Score=141.13 Aligned_cols=106 Identities=24% Similarity=0.573 Sum_probs=94.5
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC--CCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG--MGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
+.|.+++.++|++.+. .+++++|+||++||++|+.+.|.++++++.+++ .++.|+.||++++ ++++ ++|+|.+
T Consensus 7 ~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~ 81 (120)
T 1mek_A 7 DHVLVLRKSNFAEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE-SDLA-QQYGVRG 81 (120)
T ss_dssp TTEEECCTTTHHHHHH---HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC-CSSH-HHHTCCS
T ss_pred CCcEEechhhHHHHHc---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC-HHHH-HHCCCCc
Confidence 5799999999999876 688999999999999999999999999999874 2699999999998 8999 9999999
Q ss_pred CCEEEEEeCCCcc-eeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAK-PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~-~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+.. ...+.| ..+.++|.+||+++
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~g-~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 82 YPTIKFFRNGDTASPKEYTA-GREADDIVNWLKKR 115 (120)
T ss_dssp SSEEEEEESSCSSSCEECCC-CSSHHHHHHHHHTT
T ss_pred ccEEEEEeCCCcCCcccccC-ccCHHHHHHHHHhc
Confidence 9999999988742 256766 68999999999875
No 49
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.74 E-value=1.1e-17 Score=136.16 Aligned_cols=105 Identities=16% Similarity=0.295 Sum_probs=90.2
Q ss_pred CceEc-ccchHHHHHHh-cCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 319 KLVSF-RRTGIENLARL-QNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 319 ~v~~l-t~~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
.|..+ +.++|++.+.. ...+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ ++++ ++|+|.++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~ 79 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAV-AAVA-EAAGITAM 79 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTT-HHHH-HHHTCCBS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCch-HHHH-HHcCCCcc
Confidence 57778 56899998862 11278999999999999999999999999999986 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 80 PTFHVYKDGVK-ADDLVG-A-SQDKLKALVAKH 109 (112)
T ss_dssp SEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred cEEEEEECCeE-EEEEcC-C-CHHHHHHHHHHH
Confidence 99999998874 345556 4 899999999875
No 50
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.74 E-value=1.3e-17 Score=154.78 Aligned_cols=106 Identities=24% Similarity=0.517 Sum_probs=96.1
Q ss_pred CCCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCC--CeEEEEEEcCCCchHHHHHhCCC
Q 042284 316 NSQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGM--GVKVGKFRADGDHKEFAKQKLQL 393 (430)
Q Consensus 316 ~~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~--~v~~~~Vd~~~~~~~l~~~~~~V 393 (430)
.++.|+.|++++|++++. ++++++|+|||+||++|+.+.|.|+++++.+++. .+.|+.||++++ ++++ ++|+|
T Consensus 13 ~~~~v~~l~~~~~~~~~~---~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~v 87 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA-SVLA-SRFDV 87 (241)
T ss_dssp EETTEEEECTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTTC
T ss_pred cCCCcEEecccCHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC-HHHH-HhcCC
Confidence 346899999999999885 7899999999999999999999999999999873 399999999999 9999 99999
Q ss_pred CCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++||+++|++|+ .+.+.| .++.++|.+||+++
T Consensus 88 ~~~Pt~~~~~~g~--~~~~~g-~~~~~~l~~~i~~~ 120 (241)
T 3idv_A 88 SGYPTIKILKKGQ--AVDYEG-SRTQEEIVAKVREV 120 (241)
T ss_dssp CSSSEEEEEETTE--EEECCS-CSCHHHHHHHHHHH
T ss_pred CcCCEEEEEcCCC--cccccC-cccHHHHHHHHhhc
Confidence 9999999999988 567777 69999999999864
No 51
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.74 E-value=1.2e-17 Score=136.36 Aligned_cols=102 Identities=15% Similarity=0.282 Sum_probs=91.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+....++.++|+++++ .+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++ ++++ ++|+|.++|
T Consensus 9 ~~~~~~~~~~f~~~~~---~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~-~~~~-~~~~v~~~P 81 (112)
T 1syr_A 9 MVKIVTSQAEFDSIIS---QNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEV-SEVT-EKENITSMP 81 (112)
T ss_dssp CCEEECSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred eEEEECCHHHHHHHHc---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCC-HHHH-HHcCCCccc
Confidence 5678889999999886 789999999999999999999999999999875 99999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 82 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 82 TFKVYKNGSS-VDTLLG-A-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEEETTEE-EEEEES-C-CHHHHHHHHHTT
T ss_pred EEEEEECCcE-EEEEeC-C-CHHHHHHHHHHh
Confidence 9999998873 344555 5 899999999875
No 52
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.74 E-value=1.4e-17 Score=137.63 Aligned_cols=105 Identities=19% Similarity=0.376 Sum_probs=92.7
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..|..++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 12 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~P 86 (121)
T 2i1u_A 12 SATIKVTDASFATDVL--SSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN-PETA-RNFQVVSIP 86 (121)
T ss_dssp CCSEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred ccceecCHHHHHHHHH--hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhcCCCcCC
Confidence 5799999999998553 4688999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 87 t~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 87 TLILFKDGQP-VKRIVG-AKGKAALLRELSDV 116 (121)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHTCSC
T ss_pred EEEEEECCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999998873 445556 68899999998764
No 53
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=1.9e-18 Score=145.43 Aligned_cols=108 Identities=25% Similarity=0.551 Sum_probs=94.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC-CCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
..|..++.++|+..+. +.++++||+||++||++|+.+.|.|+++++.+++ .++.|+.||++++ +.++ ++|+|.++
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~~ 82 (133)
T 2dj3_A 7 GPVKVVVGKTFDAIVM--DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN-DITN-DQYKVEGF 82 (133)
T ss_dssp CSSEECCTTTCCCCCT--CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS-CCCC-SSCCCSSS
T ss_pred CceEEEcCCCHHHHhc--cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC-HHHH-hhcCCCcC
Confidence 5799999999998664 3588999999999999999999999999999974 2699999999999 8888 89999999
Q ss_pred CEEEEEeCCCcc-eeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAK-PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~-~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+.. .+.+.||..+.++|.+||+++
T Consensus 83 Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 83 PTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp SEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHH
T ss_pred CEEEEEeCCCcccceEecCCCcCHHHHHHHHHHh
Confidence 999999988753 346775568999999999875
No 54
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.74 E-value=9.4e-18 Score=160.27 Aligned_cols=107 Identities=16% Similarity=0.358 Sum_probs=94.7
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
.+.|+++|.++|++++. .+.+++|+|+||++||++|+.+.|.|+++++++++ ++.|++||++++ ++++ ++|+|.++
T Consensus 6 ~~~v~~~~~~~f~~~~~-~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~ 81 (287)
T 3qou_A 6 VENIVNINESNLQQVLE-QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE-QMIA-AQFGLRAI 81 (287)
T ss_dssp CTTEEECCTTTHHHHHT-TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC-HHHH-HTTTCCSS
T ss_pred CCccEECCHHHHHHHHH-hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC-HHHH-HHcCCCCC
Confidence 45799999999999774 33489999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| ..+.+.+.++|.++
T Consensus 82 Pt~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 82 PTVYLFQNGQP-VDGFQG-PQPEEAIRALLDXV 112 (287)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CeEEEEECCEE-EEEeeC-CCCHHHHHHHHHHH
Confidence 99999998873 445656 68899999998764
No 55
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.73 E-value=2.2e-17 Score=137.32 Aligned_cols=105 Identities=22% Similarity=0.404 Sum_probs=90.9
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC-CCchHHHHHhCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD-GDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~-~~~~~l~~~~~~V~~~ 396 (430)
..|..++.++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++ ++ ++++ ++|+|.++
T Consensus 18 ~~v~~l~~~~~~~~~~-~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~-~~~~-~~~~v~~~ 92 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRVV 92 (124)
T ss_dssp TSEEEECTTTHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSSS
T ss_pred CceEEecchhHHHHHH-hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcch-HHHH-HHcCCCee
Confidence 5689999999999876 24688999999999999999999999999999875 999999998 56 8999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHhC
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNALR 430 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~~ 430 (430)
||+++|++|+. ...+.| . ..++|.++|++++
T Consensus 93 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSV-VGEVTG-A-KYDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEE-EEEEES-S-CHHHHHHHHHHHT
T ss_pred eEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHhh
Confidence 99999998874 344555 3 4899999998863
No 56
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.73 E-value=2.9e-17 Score=132.07 Aligned_cols=103 Identities=17% Similarity=0.355 Sum_probs=89.7
Q ss_pred ceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 320 LVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 320 v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
|.++++ ++|++.+.. ..+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++||
T Consensus 2 v~~l~~~~~~~~~l~~-~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTK-ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDEC-EDIA-MEYNISSMPT 77 (106)
T ss_dssp EEECCSHHHHHHHHHH-HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ceecCCHHHHHHHHHh-cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccch-HHHH-HHcCCCcccE
Confidence 567888 899998752 3688999999999999999999999999999965 699999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~g--~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 78 FVFLKNGVK-VEEFAG--ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHT
T ss_pred EEEEcCCcE-EEEEcC--CCHHHHHHHHHHh
Confidence 999998873 344545 5889999999875
No 57
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.5e-17 Score=157.47 Aligned_cols=108 Identities=21% Similarity=0.490 Sum_probs=95.9
Q ss_pred CCCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC--CCchHHHHHhCCC
Q 042284 316 NSQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD--GDHKEFAKQKLQL 393 (430)
Q Consensus 316 ~~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~--~~~~~l~~~~~~V 393 (430)
....|++|+.++|++++. +.++++||+|||+||++|+.+.|.|+++++.+++ .+.|+.|||+ ++ +++| ++|+|
T Consensus 15 ~~~~vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~~~~-~~l~-~~~~I 89 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDLNKN-KALC-AKYDV 89 (298)
T ss_dssp SCTTCEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTSTTT-HHHH-HHTTC
T ss_pred CCCCeEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccCccC-HHHH-HhCCC
Confidence 336899999999999884 4688999999999999999999999999999987 6999999998 56 8999 99999
Q ss_pred CCCCEEEEEeCCCc----------------ceeecCCCCCCHHHHHHHHHHh
Q 042284 394 VSFPTILFFPKHSA----------------KPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~~Ptl~~~~~g~~----------------~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++||+++|++|+. ....|.| .++.+.|.+||.+.
T Consensus 90 ~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G-~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 90 NGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSG-ARTLAPIVDFSLSR 140 (298)
T ss_dssp CBSSEEEEEECCCC-------------CCCEEEECCS-CCSHHHHHHHHHTT
T ss_pred CccceEEEEECCceeecccccccccccccccceeecC-CcCHHHHHHHHHHh
Confidence 99999999999861 2577887 69999999999764
No 58
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.73 E-value=3.1e-17 Score=131.82 Aligned_cols=101 Identities=20% Similarity=0.355 Sum_probs=87.3
Q ss_pred eEc-ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEE
Q 042284 321 VSF-RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTI 399 (430)
Q Consensus 321 ~~l-t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl 399 (430)
.++ +.++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++ ++++ ++|+|.++||+
T Consensus 3 ~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~Pt~ 77 (105)
T 3m9j_A 3 KQIESKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SESEVKSMPTF 77 (105)
T ss_dssp EECCSHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTC-HHHH-HHTTCCBSSEE
T ss_pred EEcCCHHHHHHHHH-hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhh-HHHH-HHcCCCcCcEE
Confidence 344 4578888775 33689999999999999999999999999999976 99999999999 9999 99999999999
Q ss_pred EEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 400 LFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 400 ~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|++|+. ...+.| . +.++|.++|+++
T Consensus 78 ~~~~~g~~-~~~~~g-~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 78 QFFKKGQK-VGEFSG-A-NKEKLEATINEL 104 (105)
T ss_dssp EEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEECCeE-EEEEeC-C-CHHHHHHHHHHh
Confidence 99988874 445555 5 999999999875
No 59
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.73 E-value=1.7e-17 Score=143.24 Aligned_cols=103 Identities=9% Similarity=0.188 Sum_probs=87.2
Q ss_pred cccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEE
Q 042284 323 FRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFF 402 (430)
Q Consensus 323 lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~ 402 (430)
.+.++|++.+. .+.++++||+|||+||++|+.+.|.++++++++++ .+.|+.||++++ ++++ ++|+|.++||+++|
T Consensus 9 ~~~~~~~~~i~-~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~-~~~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~ 84 (149)
T 3gix_A 9 TSKKEVDQAIK-STAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK-MAAIYLVDVDQT-AVYT-QYFDISYIPSTVFF 84 (149)
T ss_dssp CSHHHHHHHHH-HCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT-TEEEEEEETTTC-CHHH-HHTTCCSSSEEEEE
T ss_pred CCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCcC-HHHH-HHcCCCccCeEEEE
Confidence 35688988774 24689999999999999999999999999999987 699999999999 9999 99999999999999
Q ss_pred eCCCcce--------eecCCCCCCHHHHHHHHHHh
Q 042284 403 PKHSAKP--------VKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 403 ~~g~~~~--------~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|+... ..+.|...+.++|.++|+++
T Consensus 85 ~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 85 FNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp ETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred ECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 9998420 23333257899999999865
No 60
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.73 E-value=5.3e-17 Score=130.10 Aligned_cols=102 Identities=19% Similarity=0.390 Sum_probs=87.9
Q ss_pred ceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 320 LVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 320 v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
|.++++ ++|++.+. ...+++++|+||++||++|+.+.|.++++++.++ ++.|+.||++++ ++++ ++|+|.++||
T Consensus 1 v~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (104)
T 2vim_A 1 MRVLATAADLEKLIN-ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQN-EEAA-AKYSVTAMPT 75 (104)
T ss_dssp CEECCSHHHHHHHHH-TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred CeecCCHHHHHHHHH-hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCC-HHHH-HHcCCccccE
Confidence 356666 88999875 2368899999999999999999999999999986 499999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 76 ~~~~~~g~~-~~~~~G--~~~~~l~~~l~~~ 103 (104)
T 2vim_A 76 FVFIKDGKE-VDRFSG--ANETKLRETITRH 103 (104)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEeCCcE-EEEEeC--CCHHHHHHHHHhh
Confidence 999998873 344445 5899999999876
No 61
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.72 E-value=4.3e-17 Score=135.97 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=90.1
Q ss_pred CCceEc-ccchHHHHHHhc-CCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSF-RRTGIENLARLQ-NREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~l-t~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
..|+++ +.++|++.+... ..+++++|+||++||++|+.+.|.|+++++.++ ++.|+.||++++ ++++ ++|+|.+
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~-~~l~-~~~~v~~ 91 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDEL-KSVA-SDWAIQA 91 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccC-HHHH-HHcCCCc
Confidence 468888 668999887632 258899999999999999999999999999987 499999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 92 ~Pt~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 92 MPTFMFLKEGKI-LDKVVG--AKKDELQSTIAKH 122 (124)
T ss_dssp SSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred cCEEEEEECCEE-EEEEeC--CCHHHHHHHHHHh
Confidence 999999998873 334445 4899999999875
No 62
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.72 E-value=4.5e-17 Score=148.59 Aligned_cols=104 Identities=22% Similarity=0.561 Sum_probs=94.7
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..|..++.++|+..+. .++++||+|||+||++|+.+.|.|+++++.+++ .+.|+.||++++ ++++ ++|+|.++|
T Consensus 97 ~~v~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 170 (210)
T 3apq_A 97 PEIITLERREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNSYP 170 (210)
T ss_dssp TTSEECCHHHHHHHHH---HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CceEEecHHHHHHHHc---cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc-HHHH-HHcCCCcCC
Confidence 5789999999999885 789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 171 t~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 200 (210)
T 3apq_A 171 SLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 200 (210)
T ss_dssp EEEEECTTSC-CEECCS-CCCHHHHHHHHHHH
T ss_pred eEEEEECCCc-eeEecC-CCCHHHHHHHHHHh
Confidence 9999988874 556666 68999999999864
No 63
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.72 E-value=1.3e-17 Score=137.84 Aligned_cols=105 Identities=26% Similarity=0.528 Sum_probs=90.6
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC----CCeEEEEEEcCCCchHHHHHhCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG----MGVKVGKFRADGDHKEFAKQKLQ 392 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~Vd~~~~~~~l~~~~~~ 392 (430)
++.|..++.++|++.+ .+.+++++|+|||+||++|+.+.|.|+++++.+++ .++.|+.||++++ + ++ + +
T Consensus 6 ~~~v~~l~~~~f~~~v--~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~-~~-~--~ 78 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIV--LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN-D-VP-D--E 78 (121)
T ss_dssp SCSSEECCTTTTTTSS--SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS-C-CS-S--C
T ss_pred CCCeEEecccCHHHHh--hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc-c-cc-c--c
Confidence 3579999999999865 24789999999999999999999999999999975 2699999999988 4 67 4 9
Q ss_pred CCCCCEEEEEeCCCcc-eeecCCCCCCHHHHHHHHHHh
Q 042284 393 LVSFPTILFFPKHSAK-PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 V~~~Ptl~~~~~g~~~-~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|.++||+++|++|+.. ...+.| .++.++|.+||+++
T Consensus 79 v~~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 IQGFPTIKLYPAGAKGQPVTYSG-SRTVEDLIKFIAEN 115 (121)
T ss_dssp CSSSSEEEEECSSCTTSCCCCCC-CSCHHHHHHHHHHT
T ss_pred cCcCCeEEEEeCcCCCCceEecC-CCCHHHHHHHHHhc
Confidence 9999999999988653 456666 68999999999875
No 64
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.72 E-value=2.2e-17 Score=135.64 Aligned_cols=101 Identities=21% Similarity=0.358 Sum_probs=86.0
Q ss_pred CceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 319 KLVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 319 ~v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
.+.++++ ++|+++++ .+++++|+||++||++|+.+.|.|+++++.+++ +.|+.||++++ ++++ ++|+|.++|
T Consensus 13 ~~~~~~~~~~~~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~-~~l~-~~~~v~~~P 85 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIK---QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES-PDIA-KECEVTAMP 85 (114)
T ss_dssp GSCBCCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred heeecCCHHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHCCCCccc
Confidence 4555554 66777665 789999999999999999999999999999876 99999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| .. .++|.++|+++
T Consensus 86 t~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 114 (114)
T 2oe3_A 86 TFVLGKDGQL-IGKIIG-AN-PTALEKGIKDL 114 (114)
T ss_dssp EEEEEETTEE-EEEEES-SC-HHHHHHHHHTC
T ss_pred EEEEEeCCeE-EEEEeC-CC-HHHHHHHHHhC
Confidence 9999988874 345556 45 89999999864
No 65
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.72 E-value=4.4e-17 Score=134.08 Aligned_cols=102 Identities=18% Similarity=0.376 Sum_probs=89.1
Q ss_pred CceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 319 KLVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 319 ~v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
.+.++++ ++|++.+. ...+++++|+||++||++|+.+.|.++++++.+ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 14 ~v~~l~~~~~~~~~l~-~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~-~~~~-~~~~v~~~P 87 (117)
T 2xc2_A 14 ELIELKQDGDLESLLE-QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKL-EETA-RKYNISAMP 87 (117)
T ss_dssp EEEECCSTTHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTS-HHHH-HHTTCCSSS
T ss_pred eeEEeCCHHHHHHHHH-hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCcc-HHHH-HHcCCCccc
Confidence 4888988 99999876 236889999999999999999999999999887 499999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| .+.++|.++|+++
T Consensus 88 t~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 88 TFIAIKNGEK-VGDVVG--ASIAKVEDMIKKF 116 (117)
T ss_dssp EEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred eEEEEeCCcE-EEEEeC--CCHHHHHHHHHHh
Confidence 9999998873 344545 5889999999875
No 66
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.72 E-value=5.6e-18 Score=141.25 Aligned_cols=105 Identities=20% Similarity=0.393 Sum_probs=87.1
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCH--------------hHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCH--------------FCQAMEGSYIELAEQLEGMGVKVGKFRADGDH 383 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~--------------~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~ 383 (430)
+.|++++.++|++.+ .+.+++++|+|||+||+ +|+.+.|.++++++.+++ ++.|++||++++
T Consensus 3 ~~v~~l~~~~f~~~~--~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~- 78 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDV--LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN- 78 (123)
T ss_dssp CSCEECCSTTHHHHT--TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC-
T ss_pred CccEecChhhHHHHH--HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC-
Confidence 468999999999755 35789999999999999 999999999999999987 699999999999
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++++ ++|+|.++||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 79 ~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 79 PGTA-PKYGIRGIPTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 121 (123)
T ss_dssp TTTG-GGGTCCBSSEEEEEESSSE-EEEEES-CCCHHHHHHHHTTT
T ss_pred HHHH-HHcCCCccCEEEEEECCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 8999 9999999999999988874 345556 68999999999875
No 67
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.72 E-value=4.7e-17 Score=161.22 Aligned_cols=106 Identities=18% Similarity=0.246 Sum_probs=93.9
Q ss_pred CCCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHH------HHHHHHHHHHcCCCeEEEEEEcCCCchHHHHH
Q 042284 316 NSQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAME------GSYIELAEQLEGMGVKVGKFRADGDHKEFAKQ 389 (430)
Q Consensus 316 ~~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~------p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~ 389 (430)
..+.|++|+.+||++++. .+++|||+||||||++|+... |.++++++.+++.++.|++|||+++ +++| +
T Consensus 11 ~~~~v~~lt~~~f~~~i~---~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~-~~l~-~ 85 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFK---KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD-AAVA-K 85 (367)
T ss_dssp CCCCCEECCTTTHHHHHH---HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT-HHHH-H
T ss_pred CCCccEECCHHHHHHHHh---hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc-HHHH-H
Confidence 346799999999999986 689999999999999974433 6899999999865699999999999 9999 9
Q ss_pred hCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 390 KLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 390 ~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|+|+++||+++|++|+ ...|.| .++.+.|.+||++.
T Consensus 86 ~~~V~~~PTl~~f~~G~--~~~y~G-~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 86 KLGLTEEDSIYVFKEDE--VIEYDG-EFSADTLVEFLLDV 122 (367)
T ss_dssp HHTCCSTTEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred HcCCCcCceEEEEECCc--EEEeCC-CCCHHHHHHHHHHh
Confidence 99999999999999987 678888 69999999999764
No 68
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=2.5e-18 Score=145.95 Aligned_cols=104 Identities=15% Similarity=0.430 Sum_probs=86.9
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCC---
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLV--- 394 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~--- 394 (430)
..|..++.++|++.+. .+.+++++|+|||+||++|+.+.|.|+++++++++.++.|+.||++++ ++++ ++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~~ 83 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY-TDVS-TRYKVSTSP 83 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC-HHHH-HHTTCCCCS
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC-HHHH-HHccCcccC
Confidence 4699999999999885 345569999999999999999999999999999855799999999999 9999 999999
Q ss_pred ---CCCEEEEEeCCCcceeecCCCCCCHHHHHHHH
Q 042284 395 ---SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFV 426 (430)
Q Consensus 395 ---~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i 426 (430)
++||+++|++|+. ...+.| ..+.++|.+||
T Consensus 84 ~~~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l 116 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKE-AMRRPQ-IDKKGRAVSWT 116 (137)
T ss_dssp SSSCSSEEEEESSSSE-EEEESC-BCSSSCBCCCC
T ss_pred CcCCCCEEEEEECCEE-EEEecC-cCchHHHHHHH
Confidence 9999999998874 334444 45555554443
No 69
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.71 E-value=6.5e-17 Score=133.89 Aligned_cols=105 Identities=18% Similarity=0.246 Sum_probs=90.6
Q ss_pred CCceEcccchHHHHHHh-cCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 318 QKLVSFRRTGIENLARL-QNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
+.+..++.++|++.+.. ...+++++|+||++||++|+.+.|.|+++++.+++ +.|+.||++++ ++++ ++|+|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~ 88 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDEL-KPIA-EQFSVEAM 88 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCC-HHHH-HHcCCCcc
Confidence 45777888999998762 12588999999999999999999999999999876 99999999999 9999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| .. .++|.++|+++
T Consensus 89 Pt~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEGDV-KDRVVG-AI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTEE-EEEEES-SC-HHHHHHHHHHH
T ss_pred cEEEEEeCCEE-EEEEeC-cC-HHHHHHHHHHH
Confidence 99999998874 345556 46 99999999875
No 70
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.71 E-value=4.9e-17 Score=138.36 Aligned_cols=104 Identities=21% Similarity=0.333 Sum_probs=77.9
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.|.+++.++|+..+. +.++ ++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++++ ++++ ++|+|.++|
T Consensus 33 ~~v~~l~~~~~~~~~~--~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 106 (140)
T 1v98_A 33 PWVVEADEKGFAQEVA--GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH-PGLA-ARYGVRSVP 106 (140)
T ss_dssp ------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccccCCHHHHHHHHH--cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC-HHHH-HHCCCCccC
Confidence 4688899999999765 2344 99999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 107 t~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 107 TLVLFRRGAP-VATWVG-ASPRRVLEERLRPY 136 (140)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCcE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999998874 344555 68899999999875
No 71
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.71 E-value=3e-17 Score=163.46 Aligned_cols=106 Identities=21% Similarity=0.465 Sum_probs=91.9
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC-----CCeEEEEEEcCCCchHHHHHhCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG-----MGVKVGKFRADGDHKEFAKQKLQ 392 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-----~~v~~~~Vd~~~~~~~l~~~~~~ 392 (430)
+.|+.|++++|+.++. .+++|||+||||||++|+.+.|.|+++++.++. .++.|++|||+++ +++| ++|+
T Consensus 5 ~~v~~l~~~~f~~~~~---~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~-~~l~-~~~~ 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILN---NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH-SDIA-QRYR 79 (382)
T ss_dssp ---CBCCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC-HHHH-HHTT
T ss_pred CceEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc-HHHH-HhcC
Confidence 4689999999999876 678999999999999999999999999999842 2599999999999 9999 9999
Q ss_pred CCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 393 LVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|.++||+++|++|+.....|.| .++.+.|.+||++.
T Consensus 80 v~~~Pt~~~f~~G~~~~~~~~G-~~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 80 ISKYPTLKLFRNGMMMKREYRG-QRSVKALADYIRQQ 115 (382)
T ss_dssp CCEESEEEEEETTEEEEEECCS-CCSHHHHHHHHHHH
T ss_pred CCcCCEEEEEeCCcEeeeeecC-cchHHHHHHHHHHh
Confidence 9999999999999842225777 69999999999864
No 72
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.71 E-value=1.4e-17 Score=139.52 Aligned_cols=88 Identities=17% Similarity=0.364 Sum_probs=79.9
Q ss_pred CCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCC
Q 042284 336 NREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSE 415 (430)
Q Consensus 336 ~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg 415 (430)
..+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++||+++|++|+. ...+.|
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G- 114 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKN-ESLA-RKFSVKSLPTIILLKNKTM-LARKDH- 114 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGC-HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCCcCEEEEEECCEE-EEEecC-
Confidence 3789999999999999999999999999999986 799999999999 9999 9999999999999988873 445555
Q ss_pred CCCHHHHHHHHHH
Q 042284 416 KRDVDSLMAFVNA 428 (430)
Q Consensus 416 ~~~~~~l~~~i~~ 428 (430)
..+.++|.++|++
T Consensus 115 ~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 115 FVSSNDLIALIKK 127 (128)
T ss_dssp CCCHHHHHHHHTT
T ss_pred CCCHHHHHHHHHh
Confidence 7999999999975
No 73
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.71 E-value=6.3e-17 Score=140.06 Aligned_cols=104 Identities=26% Similarity=0.408 Sum_probs=89.1
Q ss_pred CCceEcc-cchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 318 QKLVSFR-RTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~lt-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
..+..++ .++|+++++. ..++++||+||++||++|+.+.|.|+++++.++ ++.|+.||++++ ++++ ++|+|.++
T Consensus 12 ~~v~~l~~~~~~~~~~~~-~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~ 86 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRL-KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGV-PEVS-EKYEISSV 86 (153)
T ss_dssp CCSEEECSHHHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSS
T ss_pred CCeEEcCCHHHHHHHHHh-cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCC-HHHH-HHcCCCCC
Confidence 4688887 5899998862 238999999999999999999999999999985 499999999999 9999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 87 Pt~~~~~~G~~-~~~~~G--~~~~~l~~~i~~~ 116 (153)
T 2wz9_A 87 PTFLFFKNSQK-IDRLDG--AHAPELTKKVQRH 116 (153)
T ss_dssp SEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred CEEEEEECCEE-EEEEeC--CCHHHHHHHHHHH
Confidence 99999997773 334444 5788999999875
No 74
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.71 E-value=4.9e-17 Score=149.71 Aligned_cols=105 Identities=20% Similarity=0.393 Sum_probs=94.2
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..+..+|.++|++.+ .+.+++++|+|||+||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 12 ~~~~~lt~~~f~~~v--~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~P 86 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDV--LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 86 (222)
T ss_dssp CCCEECCTTTHHHHH--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-TTTG-GGGTCCSBS
T ss_pred CCceeCCHHHHHHHH--HhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCC-HHHH-HHcCCCcCC
Confidence 579999999999954 34789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 87 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 116 (222)
T 3dxb_A 87 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 116 (222)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEECCeE-EEEecc-ccChHHHHHHHHhh
Confidence 9999998874 445656 68999999999875
No 75
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.71 E-value=9.8e-17 Score=165.50 Aligned_cols=107 Identities=18% Similarity=0.489 Sum_probs=97.2
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
++.|++|+.++|++++. .+++++|+||||||++|+.+.|.|+++++.+++.++.|++|||+++ +++| ++|+|.++
T Consensus 13 ~~~v~~l~~~~f~~~~~---~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~ 87 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQ---SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN-QDLC-MEHNIPGF 87 (504)
T ss_dssp TSSCEECCTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CCCcEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HhcCCCcC
Confidence 36799999999999875 7899999999999999999999999999999874599999999999 9999 99999999
Q ss_pred CEEEEEeCCCcc-eeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAK-PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~-~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+.. ...|.| .++.+.|.+||.+.
T Consensus 88 Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 88 PSLKIFKNSDVNNSIDYEG-PRTAEAIVQFMIKQ 120 (504)
T ss_dssp SEEEEEETTCTTCEEECCS-CCSHHHHHHHHHHH
T ss_pred CEEEEEeCCccccceeecC-CCCHHHHHHHHHHh
Confidence 999999998843 667877 69999999999864
No 76
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.71 E-value=3.2e-17 Score=133.65 Aligned_cols=101 Identities=13% Similarity=0.229 Sum_probs=86.6
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
.+..++.++| +.+. .+++++|+||++||++|+.+.|.++++++.++ ++.|+.||++++ ++++ ++|+|.++||
T Consensus 4 ~~~~~~~~~f-~~~~---~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 75 (110)
T 2l6c_A 4 IRDITTEAGM-AHFE---GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEAR-PELM-KELGFERVPT 75 (110)
T ss_dssp CSBCGGGCSH-HHHT---TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGC-HHHH-HHTTCCSSCE
T ss_pred eeecCCHHHH-HHHH---cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCC-HHHH-HHcCCcccCE
Confidence 3556788999 5443 67899999999999999999999999998876 499999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| ..+.++|.++|++.
T Consensus 76 ~~~~~~G~~-v~~~~G-~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 76 LVFIRDGKV-AKVFSG-IMNPRELQALYASI 104 (110)
T ss_dssp EEEEESSSE-EEEEES-CCCHHHHHHHHHTC
T ss_pred EEEEECCEE-EEEEcC-CCCHHHHHHHHHHH
Confidence 999988884 445555 68999999999764
No 77
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.70 E-value=6.4e-17 Score=138.37 Aligned_cols=101 Identities=13% Similarity=0.193 Sum_probs=84.0
Q ss_pred ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEe
Q 042284 324 RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFP 403 (430)
Q Consensus 324 t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~ 403 (430)
+.++|++.+. ...+++++|+|||+||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++||+++|+
T Consensus 10 ~~~~~~~~v~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~~~-~~~~i~~~Pt~~~~~ 85 (142)
T 1qgv_A 10 NGWQVDQAIL-SEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV-PDFN-KMYELYDPCTVMFFF 85 (142)
T ss_dssp SHHHHHHHHH-TCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TSSCSCSSCEEEEEE
T ss_pred CHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC-HHHH-HHcCCCCCCEEEEEE
Confidence 4678887664 12589999999999999999999999999999976 699999999999 8999 999999999999999
Q ss_pred CCCccee--------ecCCCCC-CHHHHHHHHHHh
Q 042284 404 KHSAKPV--------KYPSEKR-DVDSLMAFVNAL 429 (430)
Q Consensus 404 ~g~~~~~--------~~~gg~~-~~~~l~~~i~~~ 429 (430)
+|+.... ...| .. +.++|.++|+++
T Consensus 86 ~G~~v~~~~g~~~~~~~~g-~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 86 RNKHIMIDLGTGNNNKINW-AMEDKQEMVDIIETV 119 (142)
T ss_dssp TTEEEEEECC------CCS-CCSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcceeee-ecCcHHHHHHHHHHH
Confidence 9884322 2334 34 488999998764
No 78
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.70 E-value=3.8e-17 Score=135.54 Aligned_cols=104 Identities=17% Similarity=0.318 Sum_probs=90.1
Q ss_pred CCceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 318 QKLVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
..+..+++ ++|++++. .+++++|+||++||++|+.+.|.++++++.+++.++.|+.||++++ ++++ ++|+|.++
T Consensus 15 ~~~~~i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~-~~~~-~~~~v~~~ 89 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ-SQIA-QEVGIRAM 89 (121)
T ss_dssp CCEEECCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC-HHHH-HHHTCCSS
T ss_pred cceEEcCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC-HHHH-HHcCCCcc
Confidence 56777766 88988774 7899999999999999999999999999888763499999999999 9999 99999999
Q ss_pred CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 90 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 90 PTFVFFKNGQK-IDTVVG-A-DPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred cEEEEEECCeE-EeeEcC-C-CHHHHHHHHHHh
Confidence 99999998874 344556 4 899999999876
No 79
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.70 E-value=3.2e-17 Score=135.16 Aligned_cols=102 Identities=9% Similarity=0.228 Sum_probs=83.4
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC-----chHHHHHhCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD-----HKEFAKQKLQ 392 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~-----~~~l~~~~~~ 392 (430)
..+..++.++|++.+. .+++++|+|||+||++|+.+.|.++++++.++. .+.+ +|++.. .++++ ++|+
T Consensus 12 ~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~--~~~~~~~~~~~~~~~~-~~~~ 84 (118)
T 1zma_A 12 KDLEVTTVVRAQEALD---KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYF--INSEEPSQLNDLQAFR-SRYG 84 (118)
T ss_dssp TTSEECCHHHHHHHHH---TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEE--EETTCGGGHHHHHHHH-HHHT
T ss_pred hhhhcCCHHHHHHHHh---CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEE--EECCCcCcHHHHHHHH-HHcC
Confidence 4578889999999876 678999999999999999999999999998865 4555 444432 15788 8999
Q ss_pred CCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 393 LVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 393 V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
|.++||+++|++|+. ...+.| ..+.++|.+||++
T Consensus 85 i~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~k 118 (118)
T 1zma_A 85 IPTVPGFVHITDGQI-NVRCDS-SMSAQEIKDFAGL 118 (118)
T ss_dssp CCSSCEEEEEETTEE-EEECCT-TCCHHHHHHHHTC
T ss_pred CCCCCeEEEEECCEE-EEEecC-CCCHHHHHHHhhC
Confidence 999999999998874 345555 7899999999863
No 80
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.69 E-value=2e-17 Score=139.77 Aligned_cols=106 Identities=9% Similarity=0.216 Sum_probs=88.3
Q ss_pred CCCCceEccc-chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCC
Q 042284 316 NSQKLVSFRR-TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLV 394 (430)
Q Consensus 316 ~~~~v~~lt~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~ 394 (430)
..+.++++++ ++|++++. ...++++||+|||+||++|+.+.|.|+++++.+ ++.|+.||++++ ++++ ++|+|.
T Consensus 18 ~~~~v~~l~~~~~~~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~-~~l~-~~~~v~ 91 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFS-STQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIH-PKLN-DQHNIK 91 (133)
T ss_dssp TTEEEEECCCTTHHHHHHT-C-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTC-HHHH-HHTTCC
T ss_pred CCccEEEecChhHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccch-HHHH-HhcCCC
Confidence 3456888886 88988775 334689999999999999999999999998777 489999999999 9999 999999
Q ss_pred CCCEEEEEe--CCCcc-eeecCCCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFP--KHSAK-PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~--~g~~~-~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++||+++|+ +|+.. ...+.| . +.++|.++|+++
T Consensus 92 ~~Pt~~~~~~~~g~g~~~~~~~G-~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 92 ALPTFEFYFNLNNEWVLVHTVEG-A-NQNDIEKAFQKY 127 (133)
T ss_dssp SSSEEEEEEEETTEEEEEEEEES-C-CHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCeEEEEEEcC-C-CHHHHHHHHHHH
Confidence 999999996 77632 344555 4 899999999875
No 81
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.69 E-value=5.4e-17 Score=159.70 Aligned_cols=104 Identities=13% Similarity=0.192 Sum_probs=94.4
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHH-------HHHHHHHHcCCCeEEEEEEcCCCchHHHHH
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGS-------YIELAEQLEGMGVKVGKFRADGDHKEFAKQ 389 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~-------~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~ 389 (430)
++.|++|++++|++.+. .+++++|+||||||+ |+.+.|. |+++++.+++.++.|++|||+++ +++| +
T Consensus 10 ~~~v~~l~~~~f~~~i~---~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~-~~l~-~ 83 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLK---KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE-AKLA-K 83 (350)
T ss_dssp CCCCEEECHHHHHHHHT---TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT-HHHH-H
T ss_pred CCccEECCHHHHHHHHh---hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC-HHHH-H
Confidence 35799999999999875 689999999999999 9999888 99999999764699999999999 9999 9
Q ss_pred hCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 390 KLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 390 ~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|+|.++||+++|++|+ ...|.| .++.+.|.+||++.
T Consensus 84 ~~~v~~~Pt~~~~~~g~--~~~~~G-~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 84 KLGFDEEGSLYVLKGDR--TIEFDG-EFAADVLVEFLLDL 120 (350)
T ss_dssp HHTCCSTTEEEEEETTE--EEEECS-CCCHHHHHHHHHTT
T ss_pred hcCCCccceEEEEECCc--EEEecC-CCCHHHHHHHHHHh
Confidence 99999999999999998 678888 69999999999864
No 82
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.69 E-value=1.3e-16 Score=135.29 Aligned_cols=105 Identities=16% Similarity=0.222 Sum_probs=89.1
Q ss_pred CCceEcc-cchHHHHHHhc-CCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSFR-RTGIENLARLQ-NREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~lt-~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
..++.++ .++|++.+... ..+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++ ++++ ++|+|.+
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~--v~~~~v~~~~~-~~~~-~~~~v~~ 99 (139)
T 3d22_A 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPS--LMFLVIDVDEL-SDFS-ASWEIKA 99 (139)
T ss_dssp TTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTS-HHHH-HHTTCCE
T ss_pred CcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEeCccc-HHHH-HHcCCCc
Confidence 4566675 69999987532 2588999999999999999999999999999854 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 100 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 100 TPTFFFLRDGQQ-VDKLVG-A-NKPELHKKITAI 130 (139)
T ss_dssp ESEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred ccEEEEEcCCeE-EEEEeC-C-CHHHHHHHHHHH
Confidence 999999988873 344555 4 789999999865
No 83
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=1.2e-16 Score=135.46 Aligned_cols=104 Identities=14% Similarity=0.125 Sum_probs=86.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
..|.+++.++|++.+.....++++||+|||+||++|+.+.|.|+++++.+.+ +.|+.||++++ . ++|+|.++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~--v~~~~vd~~~~-~----~~~~i~~~P 82 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE--TKFVKAIVNSC-I----EHYHDNCLP 82 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS--EEEEEECCSSS-C----SSCCSSCCS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--cEEEEEEhhcC-c----ccCCCCCCC
Confidence 5688999999999876333457999999999999999999999999999864 99999999987 2 689999999
Q ss_pred EEEEEeCCCcceeecCCC------CCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSE------KRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg------~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...+.|. ..+.++|.++|++.
T Consensus 83 t~~~~~~G~~-v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 83 TIFVYKNGQI-EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEEESSSSC-SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9999998875 3333341 13789999999864
No 84
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.69 E-value=9.1e-17 Score=130.83 Aligned_cols=105 Identities=19% Similarity=0.292 Sum_probs=89.1
Q ss_pred CCceEc-ccchHHHHHHhc-CCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSF-RRTGIENLARLQ-NREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~l-t~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
+.++.+ +.++|++.+... ..+++++|+||++||++|+.+.|.++++++.++ ++.|+.||++++ ++++ ++|+|.+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~-~~~~-~~~~v~~ 79 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDEL-KAVA-EEWNVEA 79 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTC-HHHH-HHHHCSS
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcccc-HHHH-HhCCCCc
Confidence 457777 569999988743 258899999999999999999999999999987 499999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 80 ~Pt~~~~~~G~~-~~~~~g--~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 80 MPTFIFLKDGKL-VDKTVG--ADKDGLPTLVAKH 110 (113)
T ss_dssp TTEEEEEETTEE-EEEEEC--CCTTHHHHHHHHH
T ss_pred ccEEEEEeCCEE-EEEEec--CCHHHHHHHHHHh
Confidence 999999998873 333444 5788999999875
No 85
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.69 E-value=2.3e-16 Score=147.21 Aligned_cols=106 Identities=17% Similarity=0.427 Sum_probs=90.9
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC--CCeEEEEEEc--CCCchHHHHHhCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG--MGVKVGKFRA--DGDHKEFAKQKLQL 393 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Vd~--~~~~~~l~~~~~~V 393 (430)
..|.+|++++|++.+. +.+++++|+|||+||++|+.+.|.|+++++.+++ ..+.|+.||| +++ ++++ ++|+|
T Consensus 12 ~~v~~l~~~~f~~~i~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~-~~l~-~~~~v 87 (244)
T 3q6o_A 12 DPLTLLQADTVRGAVL--GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN-SAVC-RDFNI 87 (244)
T ss_dssp SSSEEECTTTHHHHHS--SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT-HHHH-HHTTC
T ss_pred CCceeCChhhHHHHHh--hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh-HHHH-HHcCC
Confidence 6799999999999774 4679999999999999999999999999999975 3699999999 556 8999 99999
Q ss_pred CCCCEEEEEeCCCcc----eeecCCCCCCHHHHHHHHHHh
Q 042284 394 VSFPTILFFPKHSAK----PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~~Ptl~~~~~g~~~----~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++||+++|++|+.. ...+ +| .+.+.|.++|.++
T Consensus 88 ~~~Pt~~~~~~g~~~~~g~~~~~-~g-~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 88 PGFPTVRFFXAFTXNGSGAVFPV-AG-ADVQTLRERLIDA 125 (244)
T ss_dssp CSSSEEEEECTTCCSSSCEECCC-TT-CCHHHHHHHHHHH
T ss_pred CccCEEEEEeCCCcCCCCeeEec-CC-CCHHHHHHHHHHH
Confidence 999999999986542 2333 33 6999999998764
No 86
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.69 E-value=1.9e-16 Score=130.84 Aligned_cols=103 Identities=21% Similarity=0.348 Sum_probs=86.0
Q ss_pred CCceEc--ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSF--RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~l--t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
+.|..+ +.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+ . ++.|+.||++++ ++++ ++|+|.+
T Consensus 3 ~~v~~~~g~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~-~~~~-~~~~i~~ 76 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIK--EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKN-GNAA-DAYGVSS 76 (118)
T ss_dssp CCSEEECSCHHHHHHHHH--HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEecCCHHHHHHHHH--hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCC-HHHH-HhcCCCC
Confidence 457777 5688885443 26889999999999999999999999999999 3 699999999999 9999 9999999
Q ss_pred CCEEEEEeC----CCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPK----HSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~----g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++ |+. ...+.| ...++|.+.|++.
T Consensus 77 ~Pt~~~~~~~~~~G~~-~~~~~G--~~~~~l~~~~~~~ 111 (118)
T 2f51_A 77 IPALFFVKKEGNEIKT-LDQFVG--ADVSRIKADIEKF 111 (118)
T ss_dssp SSEEEEEEEETTEEEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcceE-EEeecC--CCHHHHHHHHHHh
Confidence 999999987 653 344555 4567799998875
No 87
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.69 E-value=6.6e-17 Score=149.93 Aligned_cols=104 Identities=20% Similarity=0.518 Sum_probs=94.5
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCC--CeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGM--GVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~--~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
..+..++.++|++++. .+++++|+|||+||++|+.+.|.|+++++.+.+. .+.|+.||++++ ++++ ++|+|.+
T Consensus 130 ~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~ 204 (241)
T 3idv_A 130 EVTLVLTKENFDEVVN---DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE-TDLA-KRFDVSG 204 (241)
T ss_dssp CSSEECCTTTHHHHHH---HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTTCCS
T ss_pred ccceeccHHHHHHhhc---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC-HHHH-HHcCCcc
Confidence 4688999999999886 6789999999999999999999999999999762 499999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+ .+.|.| .++.++|.+||++.
T Consensus 205 ~Pt~~~~~~g~--~~~~~g-~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 205 YPTLKIFRKGR--PYDYNG-PREKYGIVDYMIEQ 235 (241)
T ss_dssp SSEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred cCEEEEEECCe--EEEecC-CCCHHHHHHHHHhh
Confidence 99999999987 566877 69999999999864
No 88
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.69 E-value=3e-17 Score=139.00 Aligned_cols=101 Identities=13% Similarity=0.202 Sum_probs=88.6
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc---------CCCchHHH
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA---------DGDHKEFA 387 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~---------~~~~~~l~ 387 (430)
+..++.++.++|++.++ . +++|+|||+||++|+.+.|.|+++++.++ +.|+.||+ +++ ++++
T Consensus 15 ~~~v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~-~~l~ 85 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAA-RLEM 85 (135)
T ss_dssp TTEEEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHH-HHHH
T ss_pred cCceeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhh-HHHH
Confidence 35789999999999885 3 99999999999999999999999998874 89999999 777 8999
Q ss_pred HHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 388 KQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 388 ~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|+|.++||+++|++|+. ...+.| ..+.+.+.++++++
T Consensus 86 -~~~~v~~~Pt~~~~~~G~~-v~~~~G-~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 86 -NKAGVEGTPTLVFYKEGRI-VDKLVG-ATPWSLKVEKAREI 124 (135)
T ss_dssp -HHHTCCSSSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred -HHcCCceeCeEEEEcCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999999999999998873 445555 78999999999875
No 89
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.69 E-value=6.6e-17 Score=134.82 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=85.7
Q ss_pred CceEcccchHH--HHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEE--cCCCchHHHHHhCCCC
Q 042284 319 KLVSFRRTGIE--NLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFR--ADGDHKEFAKQKLQLV 394 (430)
Q Consensus 319 ~v~~lt~~~f~--~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd--~~~~~~~l~~~~~~V~ 394 (430)
.+..++.++|+ +.+.....+++++|+||++||++|+.+.|.++++++.+++ ++.|+.|| ++++ ++++ ++|+|.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~-~~~~-~~~~v~ 81 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKN-IDLA-YKYDAN 81 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHH-HHHH-HHTTCC
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCch-HHHH-HHcCCc
Confidence 34455555555 0011234788999999999999999999999999999975 79999999 8888 8999 999999
Q ss_pred CCCEEEEEe-CCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFP-KHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~-~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++||+++|+ +|+. ...+.| ..+.++|.++|+++
T Consensus 82 ~~Pt~~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 82 IVPTTVFLDKEGNK-FYVHQG-LMRKNNIETILNSL 115 (126)
T ss_dssp SSSEEEEECTTCCE-EEEEES-CCCHHHHHHHHHHH
T ss_pred ceeEEEEECCCCCE-EEEecC-CCCHHHHHHHHHHH
Confidence 999999999 6663 445556 68999999999875
No 90
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.68 E-value=2.4e-16 Score=129.35 Aligned_cols=105 Identities=18% Similarity=0.297 Sum_probs=89.1
Q ss_pred CCceEc-ccchHHHHHHhc-CCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSF-RRTGIENLARLQ-NREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~l-t~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
..++.+ +.++|++.+... ..+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++ ++++ ++|+|.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPG--AIFLKVDVDEL-KDVA-EAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCC--cEEEEEEcccC-HHHH-HHcCCCc
Confidence 457777 568999987632 2478999999999999999999999999999874 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 82 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 82 MPTFLFIKDGEK-VDSVVG--GRKDDIHTKIVAL 112 (118)
T ss_dssp BSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CcEEEEEeCCeE-EEEecC--CCHHHHHHHHHHH
Confidence 999999998874 334444 4789999999865
No 91
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.68 E-value=1.5e-16 Score=163.07 Aligned_cols=106 Identities=18% Similarity=0.385 Sum_probs=95.4
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
.|++|++++|++++...+.+++++|+||||||++|+.+.|.|+++++.+++ .+.|++|||+++ +++| ++|+|.++||
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 78 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-IVPLAKVDCTAN-TNTC-NKYGVSGYPT 78 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCCEEEEETTTC-HHHH-HHTTCCEESE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC-ceEEEEEECCCC-HHHH-HhcCCCCCCE
Confidence 589999999999886222349999999999999999999999999999988 699999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...|.| .++.+.|.+||.+.
T Consensus 79 l~~~~~g~~-~~~~~G-~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 79 LKIFRDGEE-AGAYDG-PRTADGIVSHLKKQ 107 (481)
T ss_dssp EEEEETTEE-EEECCS-CSSHHHHHHHHHHH
T ss_pred EEEEeCCce-eeeecC-ccCHHHHHHHHHhh
Confidence 999999964 677877 69999999999864
No 92
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.68 E-value=3.4e-17 Score=140.06 Aligned_cols=102 Identities=11% Similarity=0.144 Sum_probs=76.8
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCC--CHhHHHHHHHHHHHHHHHcCCCeE--EEEEEcCCCchHHHHHhCCCC
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPW--CHFCQAMEGSYIELAEQLEGMGVK--VGKFRADGDHKEFAKQKLQLV 394 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~w--C~~C~~~~p~~~~la~~~~~~~v~--~~~Vd~~~~~~~l~~~~~~V~ 394 (430)
.+..+++++|++++. ..+.++|+|+++| |++|+.+.|.|+++++++ + ++. |++||++++ ++++ ++|+|.
T Consensus 18 ~~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~-~~la-~~~~V~ 90 (142)
T 2es7_A 18 GWQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQS-EAIG-DRFNVR 90 (142)
T ss_dssp TCEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHH-HHHH-HTTTCC
T ss_pred cCcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCC-HHHH-HhcCCC
Confidence 578899999999875 5667899999987 999999999999999999 5 688 999999999 9999 999999
Q ss_pred CCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 91 ~iPT~~~fk~G~~-v~~~~G-~~~~~~l~~~i~~~ 123 (142)
T 2es7_A 91 RFPATLVFTDGKL-RGALSG-IHPWAELLTLMRSI 123 (142)
T ss_dssp SSSEEEEESCC-----CEES-CCCHHHHHHHHHHH
T ss_pred cCCeEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999999988874 345555 68899999999864
No 93
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.66 E-value=8.2e-16 Score=143.18 Aligned_cols=103 Identities=16% Similarity=0.287 Sum_probs=90.2
Q ss_pred CCCCceEcccchHHHHHHhcCCCCcEEEEEe--CCCCHhHHHHHHHHHHHHHHHcC--CCeEEEEEEcCC-----CchHH
Q 042284 316 NSQKLVSFRRTGIENLARLQNREDPWLIVLY--APWCHFCQAMEGSYIELAEQLEG--MGVKVGKFRADG-----DHKEF 386 (430)
Q Consensus 316 ~~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fy--a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Vd~~~-----~~~~l 386 (430)
..+.|+.|+++||++++. .+++|||+|| ||||+ +.|.|+++++.+.+ .++.|++|||++ + +++
T Consensus 14 ~~~~v~~Lt~~nF~~vi~---~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n-~~l 85 (248)
T 2c0g_A 14 TCTGCVDLDELSFEKTVE---RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN-KAL 85 (248)
T ss_dssp -CTTCEECCTTTHHHHHT---TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT-HHH
T ss_pred CCCCcEECCHHHHHHHHh---cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccccc-HHH
Confidence 446799999999999764 7889999999 99999 99999999999853 379999999998 7 999
Q ss_pred HHHhCCCC--CCCEEEEEeCCC-cceeec--CCCCCCHHHHHHHHHHh
Q 042284 387 AKQKLQLV--SFPTILFFPKHS-AKPVKY--PSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 387 ~~~~~~V~--~~Ptl~~~~~g~-~~~~~~--~gg~~~~~~l~~~i~~~ 429 (430)
| ++|+|. ++||+++|+ |+ ..+..| .| .++.++|.+||++.
T Consensus 86 a-~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G-~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 86 G-DRYKVDDKNFPSIFLFK-GNADEYVQLPSHV-DVTLDNLKAFVSAN 130 (248)
T ss_dssp H-HHTTCCTTSCCEEEEES-SSSSSEEECCTTS-CCCHHHHHHHHHHH
T ss_pred H-HHhCCCcCCCCeEEEEe-CCcCcceeecccC-CCCHHHHHHHHHHh
Confidence 9 999999 999999999 87 346777 77 69999999999864
No 94
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.64 E-value=1.2e-15 Score=150.51 Aligned_cols=111 Identities=21% Similarity=0.518 Sum_probs=95.6
Q ss_pred CCCCCCCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCC-CeEEEEEEcCCCchHHHHHh
Q 042284 312 SDLFNSQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGM-GVKVGKFRADGDHKEFAKQK 390 (430)
Q Consensus 312 ~~~~~~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~-~v~~~~Vd~~~~~~~l~~~~ 390 (430)
+..+....|..++.++|++++. +.+++++|+||||||++|+.+.|.|+++++.+++. ++.++.||++.+ . + ++
T Consensus 243 p~~~~~~~v~~l~~~~f~~~~~--~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~-~--~-~~ 316 (361)
T 3uem_A 243 PEDWDKQPVKVLVGKNFEDVAF--DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN-E--V-EA 316 (361)
T ss_dssp CTTTTTSSSEEECTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC-B--C-SS
T ss_pred CcccccCCcEEeecCchhhhcc--cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc-c--h-hh
Confidence 3334456799999999999873 57899999999999999999999999999999873 699999999988 4 6 79
Q ss_pred CCCCCCCEEEEEeCC-CcceeecCCCCCCHHHHHHHHHHh
Q 042284 391 LQLVSFPTILFFPKH-SAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 391 ~~V~~~Ptl~~~~~g-~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+|.++||+++|++| +.....|.| .++.++|.+||++.
T Consensus 317 ~~v~~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 317 VKVHSFPTLKFFPASADRTVIDYNG-ERTLDGFKKFLESG 355 (361)
T ss_dssp CCCCSSSEEEEECSSSSCCCEECCS-CSSHHHHHHHHTTT
T ss_pred cCCcccCeEEEEECCCCcceeEecC-CCCHHHHHHHHHhc
Confidence 999999999999776 444788887 69999999999763
No 95
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.62 E-value=1.6e-15 Score=127.58 Aligned_cols=100 Identities=18% Similarity=0.297 Sum_probs=81.7
Q ss_pred chHHHHHHh-cCCCCcEEEEEeCCCCHhHHHHHHHHH--HHHHHHcCCCeEEEEEEc---CCCchHHHHHhCCC---CCC
Q 042284 326 TGIENLARL-QNREDPWLIVLYAPWCHFCQAMEGSYI--ELAEQLEGMGVKVGKFRA---DGDHKEFAKQKLQL---VSF 396 (430)
Q Consensus 326 ~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~~--~la~~~~~~~v~~~~Vd~---~~~~~~l~~~~~~V---~~~ 396 (430)
.+|++.+.. ...++++||+||++||++|+.+.|.|+ ++++.+++ ++.++.||+ +.+ ++++ ++|+| .++
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~-~~l~-~~~~v~~~~~~ 92 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRN-LELS-QAYGDPIQDGI 92 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSS-HHHH-HHTTCGGGGCS
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccch-HHHH-HHhCCccCCcc
Confidence 445554432 136899999999999999999999999 99999866 699999999 888 9999 99999 999
Q ss_pred CEEEEE-eCCCcceeecCCC------CCCHHHHHHHHHHh
Q 042284 397 PTILFF-PKHSAKPVKYPSE------KRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~-~~g~~~~~~~~gg------~~~~~~l~~~i~~~ 429 (430)
||+++| .+|+. ...+.|+ ..+.++|.+||+++
T Consensus 93 Pt~~~~d~~G~~-~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 93 PAVVVVNSDGKV-RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp SEEEEECTTSCE-EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred ceEEEECCCCCE-EEEecCCcccccccCCHHHHHHHHHHh
Confidence 999999 56663 3344331 46899999999886
No 96
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.62 E-value=3.6e-15 Score=138.35 Aligned_cols=102 Identities=16% Similarity=0.295 Sum_probs=90.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeC--CCCHhHHHHHHHHHHHHHHHcC-CCeEEEEEEcC-----CCchHHHHH
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYA--PWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRAD-----GDHKEFAKQ 389 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya--~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Vd~~-----~~~~~l~~~ 389 (430)
+.|+.|++++|++++. .+++|||+||| |||+ +.|.|+++++.+.+ .++.|++||++ .+ +++| +
T Consensus 5 ~~v~~Lt~~nF~~~i~---~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~-~~l~-~ 75 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIP---KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLN-MELS-E 75 (240)
T ss_dssp TTCEECCTTHHHHHGG---GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCS-HHHH-H
T ss_pred CCceECCHHHHHHHHc---CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhh-HHHH-H
Confidence 4689999999999775 67899999999 9999 99999999999974 37999999955 47 9999 9
Q ss_pred hCCCC--CCCEEEEEeCCC-cceeecCCCCCCHHHHHHHHHHh
Q 042284 390 KLQLV--SFPTILFFPKHS-AKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 390 ~~~V~--~~Ptl~~~~~g~-~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|+|. ++||+++|++|+ .....|.| .++.+.|.+||++.
T Consensus 76 ~~~V~~~~~PTl~~f~~G~~~~~~~y~G-~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 76 KYKLDKESYPVFYLFRDGDFENPVPYTG-AVKVGAIQRWLKGQ 117 (240)
T ss_dssp HTTCCGGGCSEEEEEETTCSSCCEECCS-CSCHHHHHHHHHHT
T ss_pred HcCCCCCCCCEEEEEeCCCcCcceeecC-CCCHHHHHHHHHHh
Confidence 99999 999999999998 34678887 69999999999864
No 97
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.42 E-value=3e-17 Score=131.68 Aligned_cols=104 Identities=24% Similarity=0.429 Sum_probs=90.1
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
.|.+++.++|++.+ .+.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++++ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~--~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (106)
T 2yj7_A 2 SVIEVTDENFEQEV--LKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN-PNTA-AQYGIRSIPT 76 (106)
Confidence 36788999998755 24788999999999999999999999999999986 699999999999 8999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 77 LLLFKNGQV-VDRLVG-AQPKEALKERIDKH 105 (106)
Confidence 999987773 345555 67889999999865
No 98
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.62 E-value=2.1e-15 Score=138.64 Aligned_cols=103 Identities=11% Similarity=0.146 Sum_probs=88.1
Q ss_pred ceEcccchHHHHHHhcCCCCcE-EEEEeCCCCHhHHHHHHHHHHHHHHHcC---CCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 320 LVSFRRTGIENLARLQNREDPW-LIVLYAPWCHFCQAMEGSYIELAEQLEG---MGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 320 v~~lt~~~f~~~i~~~~~~k~v-lV~Fya~wC~~C~~~~p~~~~la~~~~~---~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
+..+++++|+.+.. .++++ +|+|||+||++|+.+.|.|+++++.+++ .++.++.||++++ ++++ ++|+|.+
T Consensus 118 ~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~ 192 (226)
T 1a8l_A 118 ETNLMDETKQAIRN---IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY-PEWA-DQYNVMA 192 (226)
T ss_dssp CCCCCHHHHHHHTT---CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC-HHHH-HHTTCCS
T ss_pred CCCCCHHHHHHHHh---cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC-HHHH-HhCCCcc
Confidence 45677888888653 55666 9999999999999999999999999971 2699999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 193 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 193 VPKIVIQVNGED-RVEFEG-AYPEKMFLEKLLSA 224 (226)
T ss_dssp SCEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred cCeEEEEeCCce-eEEEcC-CCCHHHHHHHHHHh
Confidence 999999998874 455666 68999999999875
No 99
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.62 E-value=1.2e-15 Score=126.86 Aligned_cols=103 Identities=13% Similarity=0.211 Sum_probs=86.8
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCC-------CCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc-------CCCch
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAP-------WCHFCQAMEGSYIELAEQLEGMGVKVGKFRA-------DGDHK 384 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~-------wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~-------~~~~~ 384 (430)
.+...+.++|++.+.. ..+++++|+|||+ ||++|+.+.|.|+++++.+++ ++.|+.||+ +.+ +
T Consensus 6 ~v~~~~~~~~~~~~~~-~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~-~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQ-HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPN-N 82 (123)
T ss_dssp EEEEESHHHHHHHHHT-TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTT-C
T ss_pred eEEeccHHHHHHHHHH-hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchh-H
Confidence 3566778999998762 1489999999999 999999999999999999876 799999999 677 8
Q ss_pred HHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 385 EFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 385 ~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
+++ ++|+|.++||+++|++++. ...+.+ .+.+.|.+||++
T Consensus 83 ~~~-~~~~i~~~Pt~~~~~~~~~-~~g~~~--~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFR-KNLKVTAVPTLLKYGTPQK-LVESEC--LQANLVEMLFSE 122 (123)
T ss_dssp HHH-HHHCCCSSSEEEETTSSCE-EEGGGG--GCHHHHHHHHHC
T ss_pred HHH-HHCCCCeeCEEEEEcCCce-Eecccc--CCHHHHHHHHhc
Confidence 999 8999999999999988663 444444 678899999875
No 100
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.62 E-value=2.1e-15 Score=127.33 Aligned_cols=102 Identities=14% Similarity=0.208 Sum_probs=89.9
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC--
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS-- 395 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~-- 395 (430)
+.|.++|.++|++++. .+.+++|+|||+ |++|+.+.|.++++|++|++ ++.|++||.+++ +.++ ++|+|++
T Consensus 6 plv~~~t~~~f~~~~~---~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~-~~~a-~~~gi~~~~ 78 (133)
T 2djk_A 6 PLIGEIGPETYSDYMS---AGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAF-GAHA-GNLNLKTDK 78 (133)
T ss_dssp CCSEECCHHHHHHHHH---TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTT-GGGT-TTTTCCSSS
T ss_pred CceeccChHHHHHHhc---CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHh-HHHH-HHcCCCccc
Confidence 3488999999998865 778999999999 89999999999999999988 799999999999 8999 9999999
Q ss_pred CCEEEEEeC--CCcceeecC--CCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPK--HSAKPVKYP--SEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~--g~~~~~~~~--gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++ |+ ..... | ..+.++|.+||+++
T Consensus 79 iPtl~i~~~~~g~--~~~~~~~g-~~~~~~l~~fi~~~ 113 (133)
T 2djk_A 79 FPAFAIQEVAKNQ--KFPFDQEK-EITFEAIKAFVDDF 113 (133)
T ss_dssp SSEEEEECTTTCC--BCCCCSSS-CCCHHHHHHHHHHH
T ss_pred CCEEEEEecCcCc--ccCCCCcc-ccCHHHHHHHHHHH
Confidence 999999987 54 34443 5 78999999999864
No 101
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.61 E-value=4.8e-16 Score=142.48 Aligned_cols=105 Identities=16% Similarity=0.220 Sum_probs=89.1
Q ss_pred CCceEc-ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 318 QKLVSF-RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~l-t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
..|.++ +.++|.+++.....+++|||+||++||++|+.+.|.|+++++.++ .+.|++||++ + +.++ .+|+|.++
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~-~~l~-~~~~i~~~ 173 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-N-TGAG-DRFSSDVL 173 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-H-HTCS-TTSCGGGC
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-c-HHHH-HHCCCCCC
Confidence 468888 889999988644456899999999999999999999999999986 4999999999 6 8899 89999999
Q ss_pred CEEEEEeCCCcceeecCCCCCC-------HHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPSEKRD-------VDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~gg~~~-------~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| ..+ .++|..||.+.
T Consensus 174 PTl~~~~~G~~-v~~~~G-~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 174 PTLLVYKGGEL-ISNFIS-VAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SEEEEEETTEE-EEEETT-GGGGSCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeC-CcccCcccCCHHHHHHHHHHc
Confidence 99999998874 344544 333 58999999864
No 102
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=1.5e-15 Score=127.02 Aligned_cols=106 Identities=15% Similarity=0.282 Sum_probs=85.9
Q ss_pred ceEcccchHHHHHHhc-CCCCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcCC-CchHHHHHhCCCC
Q 042284 320 LVSFRRTGIENLARLQ-NREDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRADG-DHKEFAKQKLQLV 394 (430)
Q Consensus 320 v~~lt~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~~-~~~~l~~~~~~V~ 394 (430)
.+.++..+|++.+... ..++++||+||++||++|+.+.|.+ +++++.++. ++.++.||++. .+..++ ++|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~-~~~~v~ 85 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELR-KKYGVH 85 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHH-HHTTCC
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHH-HHcCCC
Confidence 4556788898876432 3578999999999999999999999 778777765 68999999984 227899 999999
Q ss_pred CCCEEEEE-eCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFF-PKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~-~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++||+++| ++|+. ...+.| ..+.++|.++|+++
T Consensus 86 ~~Pt~~~~d~~G~~-~~~~~G-~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 86 AYPTLLFINSSGEV-VYRLVG-AEDAPELLKKVKLG 119 (130)
T ss_dssp SSCEEEEECTTSCE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcE-EEEecC-CCCHHHHHHHHHHH
Confidence 99999999 46653 445556 68899999999875
No 103
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.61 E-value=5.1e-15 Score=152.41 Aligned_cols=112 Identities=16% Similarity=0.368 Sum_probs=93.8
Q ss_pred CCCCC-CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC--CCeEEEEEEcCC--CchHHH
Q 042284 313 DLFNS-QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG--MGVKVGKFRADG--DHKEFA 387 (430)
Q Consensus 313 ~~~~~-~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Vd~~~--~~~~l~ 387 (430)
.++.+ ..|.+++.++|+..+. +.+++++|+|||+||++|+.+.|.|+++++.+++ ..+.|+.|||+. + ++++
T Consensus 6 ~Ly~~~~~V~~Lt~~~f~~~v~--~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~-~~l~ 82 (519)
T 3t58_A 6 VLYSSSDPLTLLDADSVRPTVL--GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN-SAVC 82 (519)
T ss_dssp CSCCTTSSSEEECTTTHHHHHS--SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG-HHHH
T ss_pred ccCCCCCCcEECChHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc-HHHH
Confidence 34433 5799999999999763 4679999999999999999999999999999975 369999999964 6 8999
Q ss_pred HHhCCCCCCCEEEEEeCCCc---ceeecCCCCCCHHHHHHHHHHh
Q 042284 388 KQKLQLVSFPTILFFPKHSA---KPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 388 ~~~~~V~~~Ptl~~~~~g~~---~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|+|.++||+++|++|+. ....+.| ..+.++|.++|+++
T Consensus 83 -~~~~V~~~PTl~~f~~g~~~G~~~~~~~g-~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 83 -REFNIAGFPTVRFFQAFTKNGSGATLPGA-GANVQTLRMRLIDA 125 (519)
T ss_dssp -HHTTCCSBSEEEEECTTCCSCCCEEECCS-SCCHHHHHHHHHHH
T ss_pred -HHcCCcccCEEEEEcCcccCCCceeEecC-CCCHHHHHHHHHHH
Confidence 9999999999999996543 2344555 48999999999764
No 104
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.61 E-value=2.7e-15 Score=126.71 Aligned_cols=101 Identities=19% Similarity=0.384 Sum_probs=82.8
Q ss_pred ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcCCC---chHHHHHhCCCCCCC
Q 042284 324 RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRADGD---HKEFAKQKLQLVSFP 397 (430)
Q Consensus 324 t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~~~---~~~l~~~~~~V~~~P 397 (430)
+.++|+..+... .++++||+||++||++|+.+.|.+ +++++.+++ +.++.||++.+ +.+++ ++|+|.++|
T Consensus 18 ~~~~~~~~l~~~-~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~~~l~-~~~~v~~~P 93 (134)
T 2fwh_A 18 TVDELNQALVEA-KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALL-KHLNVLGLP 93 (134)
T ss_dssp SHHHHHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHH-HHTTCCSSS
T ss_pred CHHHHHHHHHHh-cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchHHHHH-HHcCCCCCC
Confidence 457777776522 388999999999999999999999 999998875 99999999532 27899 999999999
Q ss_pred EEEEE-eCCCcce-eecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFF-PKHSAKP-VKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~-~~g~~~~-~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++| ++|+... ..+.| ..+.++|.++|+++
T Consensus 94 t~~~~d~~G~~v~~~~~~G-~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTG-FMDAETFSAHLRDR 126 (134)
T ss_dssp EEEEECTTSCBCGGGCBCS-CCCHHHHHHHHHHC
T ss_pred EEEEECCCCCEeeeeeeee-ccCHHHHHHHHHhc
Confidence 99999 6666311 35666 78999999999876
No 105
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.61 E-value=1.8e-15 Score=122.21 Aligned_cols=99 Identities=9% Similarity=0.110 Sum_probs=82.5
Q ss_pred CceEc-ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchH----HHHHhCCC
Q 042284 319 KLVSF-RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE----FAKQKLQL 393 (430)
Q Consensus 319 ~v~~l-t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~----l~~~~~~V 393 (430)
....+ +.++|+++++ .+++++|+|+|+||++|+.+.|.|+++++. . ++.|++||++++ ++ ++ .+|+|
T Consensus 7 ~~~~i~s~e~f~~ii~---~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdVde~-r~~Sn~IA-~~~~V 78 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIE---ENKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIVQQE-RDLSDYIA-KKTNV 78 (112)
T ss_dssp CEEECCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEGGGG-HHHHHHHH-HHHTC
T ss_pred ceeecCCHHHHHHHHh---cCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEeecC-chhhHHHH-HHhCC
Confidence 45556 4478999887 589999999999999999999999999985 3 599999999998 66 78 99999
Q ss_pred C-CCCEEEEEeCCCcceeecCCCCCCHHHHHHHH
Q 042284 394 V-SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFV 426 (430)
Q Consensus 394 ~-~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i 426 (430)
+ ..||+++|++|+.+-..-.+ .++.+.|.+.+
T Consensus 79 ~h~sPq~il~k~G~~v~~~SH~-~I~~~~l~~~~ 111 (112)
T 3iv4_A 79 KHESPQAFYFVNGEMVWNRDHG-DINVSSLAQAE 111 (112)
T ss_dssp CCCSSEEEEEETTEEEEEEEGG-GCSHHHHHHHT
T ss_pred ccCCCeEEEEECCEEEEEeecc-ccCHHHHHHhh
Confidence 9 59999999999953333334 68999888765
No 106
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.59 E-value=2.2e-15 Score=140.11 Aligned_cols=106 Identities=17% Similarity=0.213 Sum_probs=88.0
Q ss_pred CCceEc-ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 318 QKLVSF-RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~l-t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
..|..+ +.++|.+.+...+.+++|||+|||+||++|+.+.|.|+++++.|++ +.|++||++. +.++ .+|+|.++
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~--~~l~-~~~~I~~~ 186 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASN--TGAG-DRFSSDVL 186 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHH--HCCT-TSSCTTTC
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCc--HHHH-HHCCCCCC
Confidence 468889 7899999886334588999999999999999999999999999976 9999999975 4688 89999999
Q ss_pred CEEEEEeCCCcceeecCC------CCCCHHHHHHHHHHh
Q 042284 397 PTILFFPKHSAKPVKYPS------EKRDVDSLMAFVNAL 429 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~g------g~~~~~~l~~~i~~~ 429 (430)
||+++|++|+. ...+.| ..++.+.|..||.+.
T Consensus 187 PTll~~~~G~~-v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 187 PTLLVYKGGEL-LSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SEEEEEETTEE-EEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeCCcccccccccHHHHHHHHHHc
Confidence 99999998874 223333 125788899999764
No 107
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.59 E-value=1.9e-15 Score=139.37 Aligned_cols=141 Identities=13% Similarity=0.188 Sum_probs=108.0
Q ss_pred cccccCCCC-----CcccccchhhhccCCCccccccCCCCCCCCCC--------CCCCceEcccchHHHHHHhcCCCCcE
Q 042284 275 AKECGLHNG-----NIKQEELSQHININGNGVAQHTNGSAPASDLF--------NSQKLVSFRRTGIENLARLQNREDPW 341 (430)
Q Consensus 275 ~~e~g~~~~-----~i~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~~~v~~lt~~~f~~~i~~~~~~k~v 341 (430)
+.+|.-|.. +|+.+||-.+|.+... ...+.|..+...+. .+..+..+++++|+.++. .++++
T Consensus 64 ~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~--~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~ 138 (229)
T 2ywm_A 64 IYSPFTHKEETEKYGVDRVPTIVIEGDKDY--GIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQV---VDIPI 138 (229)
T ss_dssp EECTTTCHHHHHHTTCCBSSEEEEESSSCC--CEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTT---CCSCE
T ss_pred EecCcccHHHHHHcCCCcCcEEEEECCCcc--cceecCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHh---cCCCe
Confidence 456655432 6889999888854322 23444544444321 124578889999998763 45555
Q ss_pred -EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHH
Q 042284 342 -LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVD 420 (430)
Q Consensus 342 -lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~ 420 (430)
+|+||++||++|+.+.|.++++++.++ ++.++.||++++ ++++ ++|+|.++||+++ +|+ ...+.| ..+.+
T Consensus 139 ~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~Pt~~~--~G~--~~~~~G-~~~~~ 209 (229)
T 2ywm_A 139 EIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASEN-QDLA-EQFQVVGVPKIVI--NKG--VAEFVG-AQPEN 209 (229)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGGC-HHHH-HHTTCCSSSEEEE--GGG--TEEEES-CCCHH
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCCC-HHHH-HHcCCcccCEEEE--CCE--EEEeeC-CCCHH
Confidence 889999999999999999999999984 599999999999 9999 9999999999988 676 455777 68999
Q ss_pred HHHHHHHHh
Q 042284 421 SLMAFVNAL 429 (430)
Q Consensus 421 ~l~~~i~~~ 429 (430)
+|.+||+++
T Consensus 210 ~l~~~l~~~ 218 (229)
T 2ywm_A 210 AFLGYIMAV 218 (229)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999764
No 108
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.59 E-value=9.9e-15 Score=149.53 Aligned_cols=108 Identities=26% Similarity=0.565 Sum_probs=95.9
Q ss_pred CCCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCC-CeEEEEEEcCCCchHHHHHhCCCC
Q 042284 316 NSQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGM-GVKVGKFRADGDHKEFAKQKLQLV 394 (430)
Q Consensus 316 ~~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~-~v~~~~Vd~~~~~~~l~~~~~~V~ 394 (430)
....|..++.++|++++. +.+++++|+|||+||++|+.+.|.|+++++.+++. ++.|+.||++.+ +++ ++|+|.
T Consensus 350 ~~~~v~~~~~~~~~~~~~--~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~--~~~-~~~~v~ 424 (481)
T 3f8u_A 350 NDGPVKVVVAENFDEIVN--NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN--DVP-SPYEVR 424 (481)
T ss_dssp CCSSSEEECTTTHHHHHT--CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS--CCC-TTCCCC
T ss_pred CCCCeEEecccCHHHHhh--cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch--hhH-hhCCCc
Confidence 345789999999999874 45899999999999999999999999999999874 799999999987 788 899999
Q ss_pred CCCEEEEEeCCCcc-eeecCCCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSAK-PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~-~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++||+++|++|+.. ...+.| .++.++|.+||++.
T Consensus 425 ~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 425 GFPTIYFSPANKKLNPKKYEG-GRELSDFISYLQRE 459 (481)
T ss_dssp SSSEEEEECTTCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred ccCEEEEEeCCCeEeeeEeCC-CCCHHHHHHHHHHh
Confidence 99999999998863 677877 69999999999864
No 109
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.58 E-value=3.9e-15 Score=161.51 Aligned_cols=104 Identities=20% Similarity=0.489 Sum_probs=88.2
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
+.|+.|+.++|++.+. .+++++|+||||||++|+.+.|.|+++++.+.+ .+.|++|||+++ +++| ++|+|.++|
T Consensus 116 ~~v~~l~~~~f~~~i~---~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 189 (780)
T 3apo_A 116 PEIITLERREFDAAVN---SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNSYP 189 (780)
T ss_dssp TTEEECCHHHHHHHHT---SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-SSCC---------C
T ss_pred cceeeechHhHHhhhc---CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcC-ceEEEEEeCCCc-HHHH-HHcCCceee
Confidence 5799999999999885 789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|+++|++|+. ...|.| .++.+.|.+||.+.
T Consensus 190 t~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 219 (780)
T 3apo_A 190 SLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 219 (780)
T ss_dssp EEEEECTTSC-CEECCS-CSCHHHHHHHHHTT
T ss_pred eEEEEeCCcE-eeEecC-CCCHHHHHHHHHHh
Confidence 9999999985 567877 79999999999864
No 110
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.56 E-value=4.5e-16 Score=130.09 Aligned_cols=105 Identities=20% Similarity=0.303 Sum_probs=88.3
Q ss_pred CCceEc-ccchHHHHHHhc-CCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSF-RRTGIENLARLQ-NREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~l-t~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
..+..+ +.++|++.+... ..+++++|+||++||++|+.+.|.|+++++.+++ +.|+.||++++ ++++ ++|+|.+
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--v~~~~v~~~~~-~~~~-~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPG--AVFLKVDVDEL-KEVA-EKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTT--BCCEECCTTTS-GGGH-HHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC--CEEEEEeccch-HHHH-HHcCCCc
Confidence 467777 458999987632 3588999999999999999999999999999874 99999999999 8999 9999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 90 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 90 MPTFLFIKDGAE-ADKVVG--ARKDDLQNTIVKH 120 (130)
T ss_dssp SCCCCBCTTTTC-CBCCCT--TCTTTHHHHHHHH
T ss_pred cceEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 999999988873 334444 4778899998865
No 111
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.56 E-value=5.3e-15 Score=113.90 Aligned_cols=82 Identities=16% Similarity=0.291 Sum_probs=73.7
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCC
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRD 418 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~ 418 (430)
.+++|.||++||++|+.+.|.++++++++++ ++.|+.||++++ ++++ ++|+|.++||+++ +|+ . .+.| ..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMEN-PQKA-MEYGIMAVPTIVI--NGD--V-EFIG-APT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSS-CCTT-TSTTTCCSSEEEE--TTE--E-ECCS-SSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCC-HHHH-HHCCCcccCEEEE--CCE--E-eeec-CCC
Confidence 4689999999999999999999999999986 799999999999 8999 9999999999988 666 4 6666 578
Q ss_pred HHHHHHHHHHh
Q 042284 419 VDSLMAFVNAL 429 (430)
Q Consensus 419 ~~~l~~~i~~~ 429 (430)
.++|.++|+++
T Consensus 74 ~~~l~~~l~~~ 84 (85)
T 1fo5_A 74 KEALVEAIKKR 84 (85)
T ss_dssp SHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 112
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.56 E-value=1.2e-15 Score=153.67 Aligned_cols=95 Identities=14% Similarity=0.342 Sum_probs=80.6
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCC-------CeEEEEEEcCCCchHHHHH
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGM-------GVKVGKFRADGDHKEFAKQ 389 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~-------~v~~~~Vd~~~~~~~l~~~ 389 (430)
...|++++.++|++++. .+.+++|||+|||+||++|+.+.|.|+++++.+++. .+.|++||++++ ++++ +
T Consensus 22 ~~~V~~Lt~~~F~~~l~-~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~-~~la-~ 98 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHR-VAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE-VDLC-R 98 (470)
T ss_dssp CTTEEECSCSCGGGTCT-TGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC-HHHH-H
T ss_pred CCCcEECCHHHHHHHHH-hCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC-HHHH-H
Confidence 46899999999998764 234589999999999999999999999999999742 499999999999 9999 9
Q ss_pred hCCCCCCCEEEEEeCCCc-ceeecCC
Q 042284 390 KLQLVSFPTILFFPKHSA-KPVKYPS 414 (430)
Q Consensus 390 ~~~V~~~Ptl~~~~~g~~-~~~~~~g 414 (430)
+|+|.++||+++|++|+. ....|.|
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G 124 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECG 124 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCC
T ss_pred HcCCCccCeEEEEECCCceEEEEeeC
Confidence 999999999999976653 2344554
No 113
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.55 E-value=5.6e-15 Score=113.76 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=72.6
Q ss_pred cEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCH
Q 042284 340 PWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDV 419 (430)
Q Consensus 340 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~ 419 (430)
..+|+||++||++|+.+.|.++++++++++ ++.|+.||++++ ++++ ++|+|.++||+++ +|+ . .+.| ..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~~ 73 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVD-REKA-IEYGLMAVPAIAI--NGV--V-RFVG-APSR 73 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTC-GGGG-GGTCSSCSSEEEE--TTT--E-EEEC-SSCC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhCCceeeCEEEE--CCE--E-EEcc-CCCH
Confidence 468999999999999999999999999986 799999999999 8999 9999999999998 777 4 5556 5788
Q ss_pred HHHHHHHHHh
Q 042284 420 DSLMAFVNAL 429 (430)
Q Consensus 420 ~~l~~~i~~~ 429 (430)
++|.++|+++
T Consensus 74 ~~l~~~l~~~ 83 (85)
T 1nho_A 74 EELFEAINDE 83 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 114
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.54 E-value=3.3e-14 Score=146.54 Aligned_cols=106 Identities=23% Similarity=0.551 Sum_probs=91.2
Q ss_pred CCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHc-C-CCeEEEEEEcCCCchHHHHHhCCCC
Q 042284 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLE-G-MGVKVGKFRADGDHKEFAKQKLQLV 394 (430)
Q Consensus 317 ~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~-~-~~v~~~~Vd~~~~~~~l~~~~~~V~ 394 (430)
...|..|+.++|+.++. +.++++||+||||||++|+.+.|.|+++++.++ + .++.+++||++.+ .+. . |+|.
T Consensus 357 ~~~v~~l~~~~f~~~v~--~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~--~~~-~-~~v~ 430 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVN--DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEN--DVR-G-VVIE 430 (504)
T ss_dssp SCSEEEECTTTHHHHHH--CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGC--CCS-S-CCCS
T ss_pred cccceecccccHHHhhc--cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcc--ccc-c-CCce
Confidence 36799999999999874 468999999999999999999999999999987 2 3699999999987 344 4 9999
Q ss_pred CCCEEEEEeCCCc-ceeecCCCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSA-KPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~-~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++||+++|++|+. ....+.| .++.++|.+||++.
T Consensus 431 ~~Pt~~~~~~G~~~~~~~~~G-~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 431 GYPTIVLYPGGKKSESVVYQG-SRSLDSLFDFIKEN 465 (504)
T ss_dssp SSSEEEEECCTTSCCCCBCCS-CCCHHHHHHHHHHH
T ss_pred ecCeEEEEeCCceecceEecC-CCCHHHHHHHHHhc
Confidence 9999999988864 2566777 68999999999864
No 115
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.54 E-value=1.6e-14 Score=127.04 Aligned_cols=105 Identities=10% Similarity=0.127 Sum_probs=80.5
Q ss_pred ceEcccchHHHHHHh-cCCCCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcCCCchHH---------
Q 042284 320 LVSFRRTGIENLARL-QNREDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRADGDHKEF--------- 386 (430)
Q Consensus 320 v~~lt~~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~~~~~~l--------- 386 (430)
...++..+|++.+.. ..++++|||+|||+||++|+.+.+.+ .++.+.+++ ++.++.||++++ .++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~-~~~~~~~~~~~~ 105 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK-TPLTEPVKIMEN 105 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC-CEEEEEEEEEET
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc-cccchhhhhhhc
Confidence 445566778877642 23689999999999999999986555 667766665 699999999887 444
Q ss_pred -----------------HHHhCCCCCCCEEEEE-eCCCcceeecCCCCCC-HHHHHHHHHHh
Q 042284 387 -----------------AKQKLQLVSFPTILFF-PKHSAKPVKYPSEKRD-VDSLMAFVNAL 429 (430)
Q Consensus 387 -----------------~~~~~~V~~~Ptl~~~-~~g~~~~~~~~gg~~~-~~~l~~~i~~~ 429 (430)
+ ++|+|.++||+++| ++|+. ...+.| ..+ .++|.++|+++
T Consensus 106 ~~~~~~~~~~~~~~~~~~-~~~~v~~~Pt~~lid~~G~~-~~~~~G-~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 106 GTERTLRTVGDKWSYLQR-VKFGANAQPFYVLIDNEGNP-LNKSYA-YDEDISKYINFLQTG 164 (172)
T ss_dssp TEEEEEEEHHHHHHHHHH-HHHSCCCSSEEEEECTTSCB-SSCCBC-SCCCHHHHHHHHHHH
T ss_pred chhhhhhhhhhhhhHHHH-HHcCCCCcceEEEECCCCCE-EeeccC-CCCCHHHHHHHHHHH
Confidence 6 78999999999999 55653 444445 566 99999998764
No 116
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.50 E-value=5.4e-14 Score=152.52 Aligned_cols=140 Identities=21% Similarity=0.435 Sum_probs=114.1
Q ss_pred CcccccchhhhccCCCccccccCCCCCCCCCC------CCCCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHH
Q 042284 284 NIKQEELSQHININGNGVAQHTNGSAPASDLF------NSQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAME 357 (430)
Q Consensus 284 ~i~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~ 357 (430)
+++..|+..+|+.+.. ..+.|..+...+. ..+.|..|+.++|++++...+.++.++|.||+|||++|+.+.
T Consensus 506 ~v~~~Pt~~~~~~g~~---~~~~g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~ 582 (780)
T 3apo_A 506 NIQAYPTTVVFNQSSI---HEYEGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLM 582 (780)
T ss_dssp TCCSSSEEEEEETTEE---EEECSCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHH
T ss_pred CCCcCCeEEEEcCCce---eeecCcccHHHHHHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhh
Confidence 5677898888854322 4555655544432 236799999999999886433467899999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCc---ceeecCCCCCCHHHHHHHHHHh
Q 042284 358 GSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSA---KPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 358 p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~---~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|.|+++++.+++ ++.|+.|||+.+ ..+| ++|+|.++||+++|+.|.. ....|.|..++.++|.+||++.
T Consensus 583 p~~~~lA~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~ 654 (780)
T 3apo_A 583 PEWKRMARTLTG-LINVGSVDCGQY-HSFC-TQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGF 654 (780)
T ss_dssp HHHHHHHHHHTT-TSEEEEEETTTT-HHHH-HHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHhhC-CeEEEEEECcch-HHHH-HHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhh
Confidence 999999999998 799999999999 8999 9999999999999988764 2567776458999999999864
No 117
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.49 E-value=2.3e-14 Score=117.19 Aligned_cols=87 Identities=10% Similarity=0.186 Sum_probs=67.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC----CCeEEEEEEcCCCc-hHHHHHhCCCCCCCEEEEEeCCCcceee
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG----MGVKVGKFRADGDH-KEFAKQKLQLVSFPTILFFPKHSAKPVK 411 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~Vd~~~~~-~~l~~~~~~V~~~Ptl~~~~~g~~~~~~ 411 (430)
+.+.+||+|||+||++|+.|.+.+... ++. ..+.+.+||++.+. ++++ .+|+|.++||+++|++|+. ..+
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~---~~~~a~~~~~~l~~vdv~~~~~~~la-~~~~V~g~PT~i~f~~G~e-v~R 91 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQ---YPLTDEGRAAPVQRLQMRDPLPPGLE-LARPVTFTPTFVLMAGDVE-SGR 91 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTT---GGGSHHHHHSCEEEEETTSCCCTTCB-CSSCCCSSSEEEEEETTEE-EEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhh---HHHhhhcccceEEEEECCCCCchhHH-HHCCCCCCCEEEEEECCEE-Eee
Confidence 457899999999999999998754322 322 12778899998862 4788 8999999999999998884 345
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 042284 412 YPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 412 ~~gg~~~~~~l~~~i~~~ 429 (430)
..| ....+.|.++|+++
T Consensus 92 i~G-~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 92 LEG-YPGEDFFWPMLARL 108 (116)
T ss_dssp EEC-CCCHHHHHHHHHHH
T ss_pred ecC-CCCHHHHHHHHHHH
Confidence 555 79999999999865
No 118
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.48 E-value=1.7e-13 Score=118.53 Aligned_cols=99 Identities=11% Similarity=0.262 Sum_probs=77.5
Q ss_pred chHHHHHHhc-CCCCcEEEEEe-CCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcCCCc----------hHHHHHh
Q 042284 326 TGIENLARLQ-NREDPWLIVLY-APWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRADGDH----------KEFAKQK 390 (430)
Q Consensus 326 ~~f~~~i~~~-~~~k~vlV~Fy-a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~~~~----------~~l~~~~ 390 (430)
.++.+.+... ..+++++|+|| |+||++|+.+.|.+ .++.+.+.. ++.++.||++... .+++ ++
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~-~~ 111 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELK-AQ 111 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHH-HH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHH-HH
Confidence 3455544321 25899999999 99999999999999 788776644 6999999998751 3889 89
Q ss_pred CCCCCCCEEEEE-eCCCcceeecCCCCC--CHHHHHHHHHHh
Q 042284 391 LQLVSFPTILFF-PKHSAKPVKYPSEKR--DVDSLMAFVNAL 429 (430)
Q Consensus 391 ~~V~~~Ptl~~~-~~g~~~~~~~~gg~~--~~~~l~~~i~~~ 429 (430)
|+|.++||+++| ++|+. ...+ | .. +.++|.++|+++
T Consensus 112 ~~v~~~Pt~~~~d~~G~~-~~~~-G-~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 112 YKVTGFPELVFIDAEGKQ-LARM-G-FEPGGGAAYVSKVKSA 150 (154)
T ss_dssp TTCCSSSEEEEECTTCCE-EEEE-C-CCTTCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCCE-EEEe-c-CCCCCHHHHHHHHHHH
Confidence 999999999999 55653 4445 5 56 899999999875
No 119
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.21 E-value=3.6e-15 Score=124.82 Aligned_cols=90 Identities=16% Similarity=0.264 Sum_probs=74.6
Q ss_pred CCCCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcC--CCchHHHHHhCCCCCCCEEEEEe--CCCcc
Q 042284 336 NREDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRAD--GDHKEFAKQKLQLVSFPTILFFP--KHSAK 408 (430)
Q Consensus 336 ~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~--~~~~~l~~~~~~V~~~Ptl~~~~--~g~~~ 408 (430)
..++++||+|||+||++|+.+.|.+ +++++.+++ ++.++.||++ ++ .+++ ++|+|.++||+++|+ +|+..
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~~d~~~G~~~ 93 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEG-QELA-RRYRVPGTPTFVFLVPKAGAWE 93 (130)
Confidence 3688999999999999999999999 999988876 7999999995 45 7899 999999999999994 45520
Q ss_pred -eeecCCCCCCHHHHHHHHHHh
Q 042284 409 -PVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 409 -~~~~~gg~~~~~~l~~~i~~~ 429 (430)
...+.| ..+.++|.++|+++
T Consensus 94 ~~~~~~G-~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 94 EVGRLFG-SRPRAEFLKELRQV 114 (130)
Confidence 234555 67888999998765
No 120
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.46 E-value=5.3e-14 Score=123.43 Aligned_cols=82 Identities=13% Similarity=0.149 Sum_probs=67.9
Q ss_pred ceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCC---CCCC
Q 042284 320 LVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQ---LVSF 396 (430)
Q Consensus 320 v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~---V~~~ 396 (430)
.+.++++.++.+.. -.+++++|.|||+||++|+.+.|.++++++.++ ++.|+.||.+++ ++++ .+|. |.++
T Consensus 38 ~~~~~~~~~~~l~~--~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~-~~~~-~~~~~~~v~~i 111 (167)
T 1z6n_A 38 SNGLPSALTERLQR--IERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRA-EDDL-RQRLALERIAI 111 (167)
T ss_dssp HHCCCHHHHHHHHT--CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHH-HHHT-TTTTTCSSCCS
T ss_pred ccCCCHHHHHHHHH--hCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCC-HHHH-HHHHHcCCCCc
Confidence 34456555555432 246899999999999999999999999998876 499999999988 8888 8887 9999
Q ss_pred CEEEEEeCCCc
Q 042284 397 PTILFFPKHSA 407 (430)
Q Consensus 397 Ptl~~~~~g~~ 407 (430)
||+++|++|+.
T Consensus 112 Pt~i~~~~~G~ 122 (167)
T 1z6n_A 112 PLVLVLDEEFN 122 (167)
T ss_dssp SEEEEECTTCC
T ss_pred CeEEEECCCCC
Confidence 99999998754
No 121
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.45 E-value=2e-13 Score=140.24 Aligned_cols=177 Identities=11% Similarity=0.114 Sum_probs=114.2
Q ss_pred HHHHHHHcC-CcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHHHH
Q 042284 65 MDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQALV 142 (430)
Q Consensus 65 i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~~ 142 (430)
++++.+..+ ++++|++|||+||+++ +|+.+.+.++.++|+|+|...++..+.++++++++|++++++..... +...
T Consensus 200 i~~ir~~~~~~kvvvalSGGvDSsvla~ll~~~g~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~~~~-f~~~- 277 (503)
T 2ywb_A 200 LREVRERAGKDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKER-FLKA- 277 (503)
T ss_dssp HHHHHHHHTTSEEEEEECSSHHHHHHHHHHHHHTCEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEECHHH-HHHH-
T ss_pred HHhhhhhccCccEEEEecCCcchHHHHHHHHHcCCeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEECcHH-HHHh-
Confidence 333334444 6799999999999776 78888888889999999988888899999999999999988865432 2211
Q ss_pred HhcCCCCCCccchhhhhhhhchHHHHHHHh---cCceEEEeeeccCCcccccC--CCeeeecCCCCcccCCCCCeEEEec
Q 042284 143 RTKGLFSFYEDGHQECCRIRKVRPLKRALK---GLRAWITGQRKDQSPGTRAE--IPVVQIDTSFEGIDGGKGSLVKWNP 217 (430)
Q Consensus 143 ~~~g~~~~~~~~~~~cc~~~K~~pl~~~~~---~~~~~i~G~R~~Es~~~R~~--~~~~~~d~~~~~~~~~~~~~~~~~P 217 (430)
..|.. .+.. .+..|...+...+.+..+ +.+.+++|+..+|-...|.. ...+.......+.. ...+...++|
T Consensus 278 -l~g~~-~pe~-~r~~~~~~~~~~l~~~A~~~~g~~~la~G~~~~D~~Et~~~g~~~~iks~~~l~~l~-~~~~~~ii~P 353 (503)
T 2ywb_A 278 -LKGVE-DPEE-KRKIIGREFVAAFSQVARERGPFRFLAQGTLYPDVIESAGGHGAAKIKSHHNVGGLP-EDLEFELLEP 353 (503)
T ss_dssp -HTTCC-CHHH-HHHHHHHHHHHHHHHHHHHHCCCSEEECCCCHHHHHC-----------------CCC-SSCCCEEECT
T ss_pred -hcCCC-ChHH-HhhhhhHHHHHHHHHHHHhcCCCCEEEECCcCccchhhccCCccccccccccccccc-ccccCceEeh
Confidence 12221 1111 222233345677777665 67799999965432112220 00000000000000 0123568999
Q ss_pred ccccchHHHHHHHHHcCCCCccccccCCcc
Q 042284 218 LANVKGQDIWNFLRAMNIPINSLHSQGYIS 247 (430)
Q Consensus 218 i~dWt~~dVw~yi~~~~lp~~pLY~~Gy~s 247 (430)
|.+|+++||+.|.+++|||++.++++.|+.
T Consensus 354 L~~l~K~EVr~~a~~~glp~~i~~~~P~~~ 383 (503)
T 2ywb_A 354 FRLLFKDEVRELALLLGLPDTLRLRHPFPG 383 (503)
T ss_dssp TTTCCHHHHHHHHHHTTCCHHHHSCCCCCT
T ss_pred hhcCCHHHHHHHHHHcCCChhheecCCCCC
Confidence 999999999999999999999999887654
No 122
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.44 E-value=4.4e-13 Score=124.92 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=78.5
Q ss_pred ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHc--C-CCeEEEEEEcCCCchHHHHHhCCCCCCCEEE
Q 042284 324 RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLE--G-MGVKVGKFRADGDHKEFAKQKLQLVSFPTIL 400 (430)
Q Consensus 324 t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~--~-~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~ 400 (430)
++++++.+.+ ..++.+++.||||||++|+.+.|.|++++..++ + .++.+..||++.+ ++++ ++|+|.++||++
T Consensus 126 ~~~~~~~~~~--~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~V~~vPt~~ 201 (243)
T 2hls_A 126 EDATKEALKS--LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN-PDIA-DKYGVMSVPSIA 201 (243)
T ss_dssp CHHHHHHHHH--CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC-HHHH-HHTTCCSSSEEE
T ss_pred CHHHHHHHHH--cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC-HHHH-HHcCCeeeCeEE
Confidence 4455555433 235677999999999999999999999999983 1 3699999999999 9999 899999999998
Q ss_pred EEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 401 FFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 401 ~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+ +|+ . .+.| .++.++|.++|++.
T Consensus 202 i--~G~--~-~~~G-~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 202 I--NGY--L-VFVG-VPYEEDFLDYVKSA 224 (243)
T ss_dssp E--TTE--E-EEES-CCCHHHHHHHHHHH
T ss_pred E--CCE--E-EEeC-CCCHHHHHHHHHHH
Confidence 8 665 3 3666 68999999999864
No 123
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.44 E-value=6.2e-14 Score=122.68 Aligned_cols=97 Identities=18% Similarity=0.315 Sum_probs=74.1
Q ss_pred chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchH-HHHHhCCC--CCCCEEEEE
Q 042284 326 TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE-FAKQKLQL--VSFPTILFF 402 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~-l~~~~~~V--~~~Ptl~~~ 402 (430)
++|+.... .++++||+|||+||++|+.+.|.|+++++.+.. ++.|+.||++.+ ++ ++ ..|++ .++||+++|
T Consensus 37 ~~~~~~~~---~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~-~~~~~-~~~~~~~~~~Pt~~~~ 110 (164)
T 1sen_A 37 DGKKEAAA---SGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDE-EEPKD-EDFSPDGGYIPRILFL 110 (164)
T ss_dssp HHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGG-GSCSC-GGGCTTCSCSSEEEEE
T ss_pred HHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCC-chHHH-HHhcccCCcCCeEEEE
Confidence 45555443 689999999999999999999999998776654 467888888877 55 77 78888 669999999
Q ss_pred -eCCCcceeecCCC---------CCCHHHHHHHHHHh
Q 042284 403 -PKHSAKPVKYPSE---------KRDVDSLMAFVNAL 429 (430)
Q Consensus 403 -~~g~~~~~~~~gg---------~~~~~~l~~~i~~~ 429 (430)
.+|+. ...+.|. ..+.++|.++|+++
T Consensus 111 d~~G~~-~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 111 DPSGKV-HPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp CTTSCB-CTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred CCCCCE-EEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 56663 3333441 26889999988764
No 124
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.44 E-value=3.9e-14 Score=114.72 Aligned_cols=74 Identities=16% Similarity=0.277 Sum_probs=61.2
Q ss_pred CCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC------CCchHHHHHhCCCCCCCEEEEEeCCCcceee
Q 042284 338 EDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD------GDHKEFAKQKLQLVSFPTILFFPKHSAKPVK 411 (430)
Q Consensus 338 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~------~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~ 411 (430)
+++++|+|||+||++|+.+.|.|+++++.++ .||++ ++ ++++ ++|+|.++||+++ +|+ .
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~~~~-~~l~-~~~~V~~~PT~~i--~G~--~-- 76 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTWII--NGR--T-- 76 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTTSCC-CHHH-HHTTCCSSSEEEE--TTE--E--
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEecccccchh-HHHH-HHcCCeEeCEEEE--CCE--E--
Confidence 5678999999999999999999999986553 45665 45 8999 9999999999777 665 2
Q ss_pred cCCCCCCHHHHHHHHH
Q 042284 412 YPSEKRDVDSLMAFVN 427 (430)
Q Consensus 412 ~~gg~~~~~~l~~~i~ 427 (430)
+.| .++.++|.+|+.
T Consensus 77 ~~G-~~~~~~l~~~~~ 91 (106)
T 3kp8_A 77 YTG-VRSLEALAVASG 91 (106)
T ss_dssp EES-CCCHHHHHHHHT
T ss_pred ecC-CCCHHHHHHHhC
Confidence 556 689999999874
No 125
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.44 E-value=6.8e-13 Score=113.81 Aligned_cols=91 Identities=13% Similarity=0.193 Sum_probs=76.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC-----------------------chHHHHHhCC-
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD-----------------------HKEFAKQKLQ- 392 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~-----------------------~~~l~~~~~~- 392 (430)
+++++||+||++||++|+.+.|.++++++++++.++.|+.|+++.. ...++ +.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFM-KTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHH-HTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHH-HHhCC
Confidence 5789999999999999999999999999999766899999998732 14577 7899
Q ss_pred -CCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 393 -LVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 -V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|.++|++++++..+.....+.| ..+.++|.++|+++
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 138 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITG-EVNEKSLTDAVKLA 138 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCS-CCCHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 9999999999655544556666 68999999999876
No 126
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.44 E-value=4.6e-13 Score=112.07 Aligned_cols=87 Identities=21% Similarity=0.363 Sum_probs=75.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC----------------------CchHHHHHhCCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG----------------------DHKEFAKQKLQLV 394 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~----------------------~~~~l~~~~~~V~ 394 (430)
.+++++|.||++||++|+.+.|.+++++++++ ++.|+.|+++. + ..++ ++|+|.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD-GVIW-ARYNVP 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT-SHHH-HHTTCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc-hhHH-HhcCCC
Confidence 57899999999999999999999999999997 59999999987 4 6888 899999
Q ss_pred CCCEEEEEeCCCcceeecC---CCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSAKPVKYP---SEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~~~~~~---gg~~~~~~l~~~i~~~ 429 (430)
++|++++++.+++.. .+. | ..+.++|.++|+++
T Consensus 99 ~~P~~~lid~~G~i~-~~~~~~g-~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 99 WQPAFVFYRADGTST-FVNNPTA-AMSQDELSGRVAAL 134 (136)
T ss_dssp SSSEEEEECTTSCEE-EECCSSS-CCCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCcEE-EEEcCCC-ccCHHHHHHHHHHH
Confidence 999999995444333 565 5 68999999999876
No 127
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.44 E-value=1.4e-12 Score=110.68 Aligned_cols=102 Identities=16% Similarity=0.200 Sum_probs=81.5
Q ss_pred eEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC--------------------
Q 042284 321 VSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD-------------------- 380 (430)
Q Consensus 321 ~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~-------------------- 380 (430)
..++.+.+..... .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.|+++
T Consensus 15 ~~~~g~~~~~~~~---~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 90 (148)
T 2b5x_A 15 AWLNGEVTREQLI---GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-QLNVVAVHMPRSEDDLDPGKIKETAAEHDI 90 (148)
T ss_dssp EEESCCCCHHHHT---TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEECCCSTTTSSHHHHHHHHHHTTC
T ss_pred ccccCcccchhhc---CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEEcCCCccccCHHHHHHHHHHcCC
Confidence 4556666655332 678999999999999999999999999999988 4999999964
Q ss_pred -------CCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 381 -------GDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 381 -------~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.+ ..++ +.|+|.++|++++++.++.....+.| ..+.++|.++|+++
T Consensus 91 ~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 91 TQPIFVDSD-HALT-DAFENEYVPAYYVFDKTGQLRHFQAG-GSGMKMLEKRVNRV 143 (148)
T ss_dssp CSCEEECSS-CHHH-HHTCCCCSSEEEEECTTCBEEEEEES-CSTTHHHHHHHHHH
T ss_pred CcceEECCc-hhHH-HHhCCCCCCEEEEECCCCcEEEEecC-CCCHHHHHHHHHHH
Confidence 34 6889 89999999999999544433445555 57889999999875
No 128
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=99.43 E-value=5.8e-13 Score=128.29 Aligned_cols=163 Identities=17% Similarity=0.234 Sum_probs=99.0
Q ss_pred CcEEEEechhHHHHHH-HHHHhc-CCCcEEEEecCCCCCHHHHHHHHH-HHHHhCCcEEEEccCchHHHHHHHhcCCCCC
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLT-GRPFRVFSLDTGRLNPETHQFFDT-VEKHYGIRIEYTFPNAVEVQALVRTKGLFSF 150 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~-~~~i~vi~~DTg~~fpet~~~~~~-~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 150 (430)
++++|++|||+||+++ +++.+. +.++.++|+|+|...++..+.+.+ +++++|++++++..... +... ..+.. .
T Consensus 21 ~kvlvalSGGvDSsvla~ll~~~~g~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-f~~~--l~~~~-~ 96 (308)
T 2dpl_A 21 SKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVDAQDR-FFSA--LKGVT-D 96 (308)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCCCTTHHHHHHHHHTTTTCCEEEEEECHHH-HHHH--TTTCC-C
T ss_pred CCEEEEEeChHHHHHHHHHHHHhhCCCEEEEEEcCCCCChHHHHHHHHHHHHHcCCcEEEEECCHH-HHHh--hhCCC-C
Confidence 6799999999999776 777766 778999999999865444445555 66789999988765421 2211 12221 1
Q ss_pred CccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEecccccchHHHHH
Q 042284 151 YEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQDIWN 228 (430)
Q Consensus 151 ~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~ 228 (430)
+......||.. ....+.+..+ +.+.+++|+..+|-...+..+...... .+. ....+...++||.+|+++||+.
T Consensus 97 pe~~~~~~~~~-~~~~l~~~A~~~g~~~la~Gh~~dD~~Et~~~iks~~~~---~~l-~~~~~~~virPL~~l~K~EI~~ 171 (308)
T 2dpl_A 97 PEEKRKIIGRV-FIEVFEEVAKKIGAEYLIQGTIAPDWIESQGKIKSHHNV---GGL-PEKLNLKLIEPLRDLYKDEVRE 171 (308)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHTCSEEECCCCCC-------------------------CCCEEECTTTTCCHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHcCcCEEEECCCCccchhhccchhhhhcc---ccC-CccCCCeEEEEcccCCHHHHHH
Confidence 11112234443 3344554444 678999999987643222222211100 000 0012456899999999999999
Q ss_pred HHHHcCCCCccccccCC
Q 042284 229 FLRAMNIPINSLHSQGY 245 (430)
Q Consensus 229 yi~~~~lp~~pLY~~Gy 245 (430)
|.+.+|+|++..+++.|
T Consensus 172 ~a~~~glp~~i~~~~P~ 188 (308)
T 2dpl_A 172 LAKFLGLPEKIYNRMPF 188 (308)
T ss_dssp HHHHTTCCHHHHTCCCC
T ss_pred HHHHhCCCceeeecCCC
Confidence 99999999877666543
No 129
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=99.43 E-value=1.3e-12 Score=126.45 Aligned_cols=154 Identities=16% Similarity=0.151 Sum_probs=108.5
Q ss_pred CcEEEEechhHHHHHH-HHHHhc----CCC-cEEEEecCCCC--CHHHHHHHHHHHHHhCCcEEEEccCchHHHHHHHhc
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLT----GRP-FRVFSLDTGRL--NPETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRTK 145 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~----~~~-i~vi~~DTg~~--fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~ 145 (430)
++++|++|||+||++| +++.+. +.+ +.++|+|+|.. .++..++++++++++|++++++..+... +....
T Consensus 25 ~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~~v~~~~~~~---~~~~~ 101 (317)
T 1wy5_A 25 RRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRA---FAKEN 101 (317)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHH---HHHHT
T ss_pred CEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEEechh---hhccC
Confidence 5799999999999776 777664 467 88999999974 4788999999999999999888765432 22233
Q ss_pred CCCCCCccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecC--CCCcccCCCCCeEEEeccccc
Q 042284 146 GLFSFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDT--SFEGIDGGKGSLVKWNPLANV 221 (430)
Q Consensus 146 g~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~--~~~~~~~~~~~~~~~~Pi~dW 221 (430)
| .+...||...+...+.+... +++.+++|++++|.. ....+....... ...+.. . .....++||++|
T Consensus 102 ~------~~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~dD~~-Et~l~~l~rg~g~~gl~~~~-~-~~~~iirPLl~~ 172 (317)
T 1wy5_A 102 R------MSLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDLL-ETSLLFFTRGTGLDGLIGFL-P-KEEVIRRPLYYV 172 (317)
T ss_dssp T------CCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHHHHH-HHHHHHHHHCCCHHHHHCSC-S-EETTEECTTTTC
T ss_pred C------CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeCchhHHH-HHHHHHHHhCCCcccccCCC-C-CCCeEECCCccC
Confidence 3 24567888888888888776 667999999998753 211111000000 000000 0 001368999999
Q ss_pred chHHHHHHHHHcCCCCcc
Q 042284 222 KGQDIWNFLRAMNIPINS 239 (430)
Q Consensus 222 t~~dVw~yi~~~~lp~~p 239 (430)
+.+||+.|++.+|||+..
T Consensus 173 ~k~eI~~~~~~~gl~~~~ 190 (317)
T 1wy5_A 173 KRSEIEEYAKFKGLRWVE 190 (317)
T ss_dssp CHHHHHHHHHHTTCCCCC
T ss_pred CHHHHHHHHHHcCCCeeE
Confidence 999999999999999864
No 130
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.43 E-value=6.6e-14 Score=120.59 Aligned_cols=68 Identities=13% Similarity=0.204 Sum_probs=51.6
Q ss_pred CCCCcEEEEEeCCCCHhHHHHHHHHHHH---HHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEe-CCCc
Q 042284 336 NREDPWLIVLYAPWCHFCQAMEGSYIEL---AEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFP-KHSA 407 (430)
Q Consensus 336 ~~~k~vlV~Fya~wC~~C~~~~p~~~~l---a~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~-~g~~ 407 (430)
..+++|||+|||+||++|+.|.|.+.+. .+... ..|+.||+|.+..+++ .+++|.++||++||+ +|+.
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---~~fv~V~vD~e~~~~~-~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---NKFIMLNLMHETTDKN-LSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---HTCEEEEESSCCSCGG-GCTTCCCSSEEEEECTTSCB
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---cCeEEEEecCCchhhH-hhcCCCCCCEEEEECCCCCE
Confidence 3689999999999999999999998764 32222 2355555543325677 899999999999998 6663
No 131
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.42 E-value=2e-13 Score=120.04 Aligned_cols=78 Identities=13% Similarity=0.282 Sum_probs=66.3
Q ss_pred cccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHH-H--HHHHHHHcCCCeEEEEEEcCCCchHHHHHhC--------
Q 042284 323 FRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGS-Y--IELAEQLEGMGVKVGKFRADGDHKEFAKQKL-------- 391 (430)
Q Consensus 323 lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~-~--~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~-------- 391 (430)
..++.|+.... .+++|||+|||+||++|+.|.|. | .++++.+++ ++.+++||.++. +++. +.|
T Consensus 27 ~~~ea~~~A~~---~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~-~~l~-~~y~~~~q~~~ 100 (173)
T 3ira_A 27 WGEEAFEKARK---ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREER-PDID-NIYMTVCQIIL 100 (173)
T ss_dssp SSHHHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTC-HHHH-HHHHHHHHHHH
T ss_pred cCHHHHHHHHH---hCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCccc-CcHH-HHHHHHHHHHc
Confidence 44577777665 79999999999999999999993 3 677777765 699999999998 9998 788
Q ss_pred CCCCCCEEEEEe-CCC
Q 042284 392 QLVSFPTILFFP-KHS 406 (430)
Q Consensus 392 ~V~~~Ptl~~~~-~g~ 406 (430)
+|.++||+++|+ +|+
T Consensus 101 gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 101 GRGGWPLNIIMTPGKK 116 (173)
T ss_dssp SCCCSSEEEEECTTSC
T ss_pred CCCCCcceeeECCCCC
Confidence 999999999997 555
No 132
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.42 E-value=1e-12 Score=113.98 Aligned_cols=90 Identities=10% Similarity=0.248 Sum_probs=76.1
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhC-------------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKL------------------------- 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~------------------------- 391 (430)
.++++||+||++||++|+.+.|.++++++++++.++.|+.|+++.. ++.. ++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ-LPNV-KNYMKTQGIIYPVMMATPELIRAFNGYI 110 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC-HHHH-HHHHHHHTCCSCEEECCHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HHHHHHcCCCCceEecCHHHHHHHhhhh
Confidence 5789999999999999999999999999999886699999999987 6655 555
Q ss_pred --CCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 --QLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 --~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|.++|++++++..+.+...+.| ..+.++|.++|+++
T Consensus 111 ~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 111 DGGITGIPTSFVIDASGNVSGVIVG-PRSKADFDRIVKMA 149 (165)
T ss_dssp TTCSCSSSEEEEECTTSBEEEEECS-CCCHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 89999999999655443455656 68899999999865
No 133
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.42 E-value=4.3e-13 Score=101.21 Aligned_cols=74 Identities=15% Similarity=0.245 Sum_probs=63.9
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCC-CH
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKR-DV 419 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~-~~ 419 (430)
..|+||++||++|+.+.|.++++++.++. ++.++.|| + ++++ ++|+|.++||+++ +|+ .... | .. +.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~---~-~~~~-~~~~v~~~Pt~~~--~G~--~~~~-G-~~~~~ 69 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIK---E-MDQI-LEAGLTALPGLAV--DGE--LKIM-G-RVASK 69 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC---S-HHHH-HHHTCSSSSCEEE--TTE--EEEC-S-SCCCH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEec---C-HHHH-HHCCCCcCCEEEE--CCE--EEEc-C-CCCCH
Confidence 46899999999999999999999999986 69999998 5 8999 9999999999988 776 4444 5 56 89
Q ss_pred HHHHHHH
Q 042284 420 DSLMAFV 426 (430)
Q Consensus 420 ~~l~~~i 426 (430)
++|.++|
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998875
No 134
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.42 E-value=3.6e-13 Score=123.54 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=79.6
Q ss_pred cchHHHHHHhcCCCCcEEEEEeCC-CCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC--CchHHHHHhCCCCCCCEEEE
Q 042284 325 RTGIENLARLQNREDPWLIVLYAP-WCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG--DHKEFAKQKLQLVSFPTILF 401 (430)
Q Consensus 325 ~~~f~~~i~~~~~~k~vlV~Fya~-wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~--~~~~l~~~~~~V~~~Ptl~~ 401 (430)
.+++++++.....+..++|+||++ ||++|+.+.|.++++++. .+ ++.|+.||+++ + ++++ ++|+|.++||+++
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~ 84 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFDTPEG-KELA-KRYRIDRAPATTI 84 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETTSHHH-HHHH-HHTTCCSSSEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCCCccc-HHHH-HHcCCCcCceEEE
Confidence 355556552123456778999999 999999999999999865 33 69999999998 8 9999 9999999999999
Q ss_pred EeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 402 FPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 402 ~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
|++|+.....+.| ..+.+++.+|+..
T Consensus 85 ~~~g~~~~~~~~G-~~~~~~l~~~l~~ 110 (226)
T 1a8l_A 85 TQDGKDFGVRYFG-LPAGHEFAAFLED 110 (226)
T ss_dssp EETTBCCSEEEES-CCCTTHHHHHHHH
T ss_pred EcCCceeeEEEec-cCcHHHHHHHHHH
Confidence 9998754466766 5677788888765
No 135
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.41 E-value=8.6e-13 Score=111.58 Aligned_cols=88 Identities=10% Similarity=0.271 Sum_probs=74.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------------------------CchHHHHHhC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------------------------DHKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------------------------~~~~l~~~~~ 391 (430)
.++++||+||++||++|+.+.|.+++++++++..++.|+.|+++. + ..++ ++|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~ 110 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSK-GELM-KEY 110 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSS-SHHH-HHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCc-hhHH-Hhc
Confidence 578999999999999999999999999999985579999999964 4 6889 999
Q ss_pred CCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHH
Q 042284 392 QLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427 (430)
Q Consensus 392 ~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~ 427 (430)
+|.++|++++++..+++...+.| ..+.++|.++|+
T Consensus 111 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~ 145 (145)
T 3erw_A 111 HIITIPTSFLLNEKGEIEKTKIG-PMTAEQLKEWTE 145 (145)
T ss_dssp TCCEESEEEEECTTCCEEEEEES-CCCHHHHHHHHC
T ss_pred CcCccCeEEEEcCCCcEEEEEcC-CcCHHHHHHhhC
Confidence 99999999999544433455656 689999998874
No 136
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.40 E-value=1e-12 Score=109.78 Aligned_cols=87 Identities=21% Similarity=0.282 Sum_probs=74.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-----------------------CchHHHHHhCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-----------------------DHKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-----------------------~~~~l~~~~~~V 393 (430)
.+++++|+||++||++|+.+.|.++++++.++ ++.|+.|+++. + ..++ +.|+|
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i 99 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTD-GSVW-ANFGV 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTT-CHHH-HHTTC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCC-cHHH-HHcCC
Confidence 57899999999999999999999999999987 59999999854 3 6788 89999
Q ss_pred CCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++|++++++.++... .+.| ..+.++|.++|+++
T Consensus 100 ~~~P~~~~id~~g~i~-~~~g-~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 100 TQQPAYAFVDPHGNVD-VVRG-RMSQDELTRRVTAL 133 (136)
T ss_dssp CSSSEEEEECTTCCEE-EEES-CCCHHHHHHHHHHH
T ss_pred CCCceEEEECCCCCEE-EEec-CCCHHHHHHHHHHH
Confidence 9999999996444323 6666 68899999999875
No 137
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.40 E-value=1.7e-12 Score=111.04 Aligned_cols=91 Identities=9% Similarity=0.251 Sum_probs=76.4
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------chHHHHHhCCCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------HKEFAKQKLQLVS 395 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------~~~l~~~~~~V~~ 395 (430)
.++++||+||++||++|+.+.|.+.++++.+++.++.|+.|+++.. +..++ +.|+|.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVL-DAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHH-HHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHH-HhcCCCC
Confidence 5789999999999999999999999999999865699999999763 14788 8999999
Q ss_pred CCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|++++++..+.....+.| ..+.++|.++|+++
T Consensus 104 ~P~~~lid~~G~i~~~~~G-~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTG-TMTESMIHDYMNLI 136 (151)
T ss_dssp SCEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCcEEEEEeC-CCCHHHHHHHHHHH
Confidence 9999999544433445555 67999999999876
No 138
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.39 E-value=1e-12 Score=120.97 Aligned_cols=98 Identities=16% Similarity=0.274 Sum_probs=78.7
Q ss_pred chHHHHHHhcCCCCcEEEEEe-----CCCCHhHHHHHHHHHHHHHHH--cCCCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 326 TGIENLARLQNREDPWLIVLY-----APWCHFCQAMEGSYIELAEQL--EGMGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fy-----a~wC~~C~~~~p~~~~la~~~--~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
+.+++++. .+..++++|.|| +|||++|+.+.|.|+++++.+ .+ ++.|++|||+++ +++| ++|+|+++||
T Consensus 9 ~~l~~~~~-~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 84 (229)
T 2ywm_A 9 MQLKELAQ-KEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQD-KIKLDIYSPFTH-KEET-EKYGVDRVPT 84 (229)
T ss_dssp HHHHHHHH-HHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTT-TEEEEEECTTTC-HHHH-HHTTCCBSSE
T ss_pred HHHHHHHH-HhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCC-ceEEEEecCccc-HHHH-HHcCCCcCcE
Confidence 44555441 024567766666 899999999999999999888 44 799999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++|++|+ ....|.| .++.++|.+|+.++
T Consensus 85 l~~~~~~~-~~~~~~G-~~~~~~l~~~~~~~ 113 (229)
T 2ywm_A 85 IVIEGDKD-YGIRYIG-LPAGLEFTTLINGI 113 (229)
T ss_dssp EEEESSSC-CCEEEES-CCCTTHHHHHHHHH
T ss_pred EEEECCCc-ccceecC-CccHHHHHHHHHHH
Confidence 99998654 3677877 57888898888753
No 139
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.39 E-value=5.2e-13 Score=115.83 Aligned_cols=105 Identities=15% Similarity=0.266 Sum_probs=79.7
Q ss_pred CceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc-------------------
Q 042284 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA------------------- 379 (430)
Q Consensus 319 ~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~------------------- 379 (430)
.+..++.+.+... ...++++||+||++||++|+.+.|.+++++++++..++.|+.|++
T Consensus 22 ~l~~~~g~~~~~~---~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 22 TMKTADNRPASVY---LKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGL 98 (164)
T ss_dssp TCEETTSSBGGGG---CCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTS
T ss_pred ccCCCCCCEeeHH---HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhC
Confidence 4555666555542 236789999999999999999999999999987654577766654
Q ss_pred ---------CCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 380 ---------DGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 380 ---------~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+.+ .+++ ++|+|.++|++++++..++....+.| ..+.++|.++|+++
T Consensus 99 ~~~~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 99 NYPKLPVVTDNG-GTIA-QNLNISVYPSWALIGKDGDVQRIVKG-SINEAQALALIRNP 154 (164)
T ss_dssp CCTTSCEEECTT-CHHH-HHTTCCSSSEEEEECTTSCEEEEEES-CCCHHHHHHHHHCT
T ss_pred CCCcceEEEcCc-hHHH-HHcCCCccceEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 333 6788 89999999999999543333444555 68999999999865
No 140
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.36 E-value=2.4e-12 Score=110.08 Aligned_cols=89 Identities=17% Similarity=0.291 Sum_probs=75.8
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCch-----------------------HHHHHhCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHK-----------------------EFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~-----------------------~l~~~~~~V 393 (430)
.++++||.||++||++|+.+.|.++++.+.+++.++.|+.|+++.+ . .++ +.|+|
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v 106 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKN-KKAWENMVTKDQLKGIQLHMGTDRTFM-DAYLI 106 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSC-HHHHHHHHHHHTCCSEEEECSSCTHHH-HHTTC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCc-HHHHHHHHHhcCCCCceeecCcchhHH-HHcCc
Confidence 4789999999999999999999999999999876799999999876 3 688 89999
Q ss_pred CCCCEEEEEe-CCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 394 VSFPTILFFP-KHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~~Ptl~~~~-~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++|++++++ +|+ ....+.| ..+.++|.++|+++
T Consensus 107 ~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 107 NGIPRFILLDRDGK-IISANMT-RPSDPKTAEKFNEL 141 (152)
T ss_dssp CSSCCEEEECTTSC-EEESSCC-CTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCe-EEEccCC-CCCHHHHHHHHHHH
Confidence 9999999998 555 2333444 67889999999875
No 141
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.36 E-value=3.6e-12 Score=110.01 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=74.7
Q ss_pred CCCcEEEEEeCCCCHhHHH-HHHHHHHHHHHHcCCCeEEEEEEcC----------------------------CCchH--
Q 042284 337 REDPWLIVLYAPWCHFCQA-MEGSYIELAEQLEGMGVKVGKFRAD----------------------------GDHKE-- 385 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v~~~~Vd~~----------------------------~~~~~-- 385 (430)
.++++||+||++||++|+. +.|.++++++++++.++.|+.|+++ .. ..
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMP-REGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCc-cccc
Confidence 5789999999999999999 6999999999998767999999862 22 33
Q ss_pred ----HHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 386 ----FAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 386 ----l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++ ++|+|.++|++++++..++....+.| ..+.++|.++|+++
T Consensus 108 ~~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 153 (160)
T 3lor_A 108 RIPSTM-KKYRLEGTPSIILADRKGRIRQVQFG-QVDDFVLGLLLGSL 153 (160)
T ss_dssp SSCHHH-HHTTCCSSSEEEEECTTSBEEEEEES-CCCHHHHHHHHHHH
T ss_pred hhhhHH-HhcccCccceEEEECCCCcEEEEecC-cCCHHHHHHHHHHH
Confidence 88 89999999999999754444455556 68899999999875
No 142
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.36 E-value=4e-12 Score=109.57 Aligned_cols=90 Identities=14% Similarity=0.054 Sum_probs=74.5
Q ss_pred CCCcEEEEEeCCCCHhHHHH-HHHHHHHHHHHcCCCeEEEEEEcC----------------------------CCch---
Q 042284 337 REDPWLIVLYAPWCHFCQAM-EGSYIELAEQLEGMGVKVGKFRAD----------------------------GDHK--- 384 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~Vd~~----------------------------~~~~--- 384 (430)
.++++||+||++||++|+.+ .|.++++++++++.++.|+.|+++ .. .
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQP-GDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCc-cchh
Confidence 47899999999999999995 999999999998667999999863 12 2
Q ss_pred --HHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 385 --EFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 385 --~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++ +.|+|.++|++++++..+.+...+.| ..+.++|.++|+++
T Consensus 106 ~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 106 MPRTM-AAYQMRGTPSLLLIDKAGDLRAHHFG-DVSELLLGAEIATL 150 (158)
T ss_dssp SCHHH-HHTTCCSSSEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred hHHHH-HHcCCCCCCEEEEECCCCCEEEEEeC-CCCHHHHHHHHHHH
Confidence 588 89999999999999655543455555 68899999999875
No 143
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.35 E-value=4.6e-12 Score=105.60 Aligned_cols=90 Identities=19% Similarity=0.313 Sum_probs=74.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc----------------------------CCCchHHHH
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA----------------------------DGDHKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~----------------------------~~~~~~l~~ 388 (430)
.++++||+||++||++|+.+.|.+++++++++. ++.++.|++ +.+ ..++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~- 97 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPS-GKLL- 97 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTT-CHHH-
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcc-hHHH-
Confidence 578999999999999999999999999999765 799999954 223 5788
Q ss_pred HhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHhC
Q 042284 389 QKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNALR 430 (430)
Q Consensus 389 ~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~~ 430 (430)
++|+|.++|++++++..++....+.| ..+.++|.++|++++
T Consensus 98 ~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l~ 138 (138)
T 4evm_A 98 ETYGVRSYPTQAFIDKEGKLVKTHPG-FMEKDAILQTLKELA 138 (138)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEEES-CCCHHHHHHHHHHCC
T ss_pred HHcCcccCCeEEEECCCCcEEEeecC-CCcHHHHHHHHHhhC
Confidence 89999999999999544433455555 689999999999874
No 144
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.33 E-value=2.4e-12 Score=109.32 Aligned_cols=89 Identities=12% Similarity=0.219 Sum_probs=73.8
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchH-------------------------HHHHhC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE-------------------------FAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~-------------------------l~~~~~ 391 (430)
.++++||+||++||++|+.+.|.++++++.+++.++.|+.|+++.+ ++ ++ +.|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK-DEEWLKFIRSKKIGGWLNVRDSKNHTDFK-ITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS-SHHHHHHHHHHTCTTSEEEECTTCCCCHH-HHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC-HHHHHHHHHHcCCCCceEEeccccchhHH-Hhc
Confidence 5789999999999999999999999999999875699999999977 55 88 899
Q ss_pred CCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 392 QLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 392 ~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
+|.++|++++++..+.....+.| ..+.+++.+.+.+
T Consensus 108 ~i~~~P~~~lid~~G~i~~~~~g-~~~~~~~l~~l~~ 143 (148)
T 3hcz_A 108 DIYATPVLYVLDKNKVIIAKRIG-YENLDDFLVQYEK 143 (148)
T ss_dssp CCCSSCEEEEECTTCBEEEESCC-GGGHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCcEEEecCC-HHHHHHHHHHHHH
Confidence 99999999999554444455555 5667777666654
No 145
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.33 E-value=6.1e-12 Score=107.70 Aligned_cols=90 Identities=20% Similarity=0.269 Sum_probs=74.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc-----------------------CCCchHHHHHhCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA-----------------------DGDHKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~-----------------------~~~~~~l~~~~~~V 393 (430)
.++++||.||++||++|+.+.|.+.++++.+++.++.|+.|+. +.+ ..++ +.|+|
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i 104 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDAD-KAVG-QAFGT 104 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSS-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCch-HHHH-HHcCC
Confidence 5789999999999999999999999999999875688887764 334 6788 89999
Q ss_pred CCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++|++++++.++.....+.| ..+.++|.++|+++
T Consensus 105 ~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 105 QVYPTSVLIGKKGEILKTYVG-EPDFGKLYQEIDTA 139 (153)
T ss_dssp CSSSEEEEECSSSCCCEEEES-SCCHHHHHHHHHHH
T ss_pred CccCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 999999999544433455666 68999999999865
No 146
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.33 E-value=2.3e-12 Score=103.84 Aligned_cols=78 Identities=18% Similarity=0.264 Sum_probs=68.1
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCC
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRD 418 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~ 418 (430)
.+.|+.||++||++|+.+.|.+++++++++ +.|..||++++ ++++ .+|++. +|++++|.+|+ .+ ..| ..+
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---i~~~~vDId~d-~~l~-~~ygv~-VP~l~~~~dG~--~v-~~g-~~~ 98 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW---FELEVINIDGN-EHLT-RLYNDR-VPVLFAVNEDK--EL-CHY-FLD 98 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC---CCCEEEETTTC-HHHH-HHSTTS-CSEEEETTTTE--EE-ECS-SCC
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC---CeEEEEECCCC-HHHH-HHhCCC-CceEEEEECCE--EE-Eec-CCC
Confidence 367999999999999999999999998873 88999999998 9999 899997 99999999987 34 334 588
Q ss_pred HHHHHHHH
Q 042284 419 VDSLMAFV 426 (430)
Q Consensus 419 ~~~l~~~i 426 (430)
.++|.+||
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 89999887
No 147
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.33 E-value=5e-12 Score=107.16 Aligned_cols=86 Identities=15% Similarity=0.252 Sum_probs=70.6
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHH---HHHHHcCCCeEEEEEEcCCCchH------------------------HHHH
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIE---LAEQLEGMGVKVGKFRADGDHKE------------------------FAKQ 389 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~---la~~~~~~~v~~~~Vd~~~~~~~------------------------l~~~ 389 (430)
.++++||+|||+||++|+.+.|.+.+ +.+++++.++.++.|+.+.. .+ +. +
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 107 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEE-LDEWKKHRNDFAKEWTNGYDKELVIKNK-N 107 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSC-HHHHHHHGGGSCTTSEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCC-HHHHHHHHHhcccccccccCccchhhhh-h
Confidence 46899999999999999999999999 99999776899999999876 33 36 7
Q ss_pred hCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 390 KLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 390 ~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
.|+|.++|++++++..+.+. +.+ .+.++|.++|++
T Consensus 108 ~~~v~~~P~~~lid~~G~i~--~~~--~~~~~l~~~l~e 142 (142)
T 3eur_A 108 LYDLRAIPTLYLLDKNKTVL--LKD--ATLQKVEQYLAE 142 (142)
T ss_dssp CSCCTTCSEEEEECTTCBEE--EEE--ECHHHHHHHHHC
T ss_pred hcCCCcCCeEEEECCCCcEE--ecC--CCHHHHHHHHhC
Confidence 89999999999997665422 222 357899998864
No 148
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.32 E-value=8.2e-12 Score=107.89 Aligned_cols=91 Identities=14% Similarity=0.314 Sum_probs=75.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------------------CchHHHHHhCCCCCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------------------DHKEFAKQKLQLVSFP 397 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------------------~~~~l~~~~~~V~~~P 397 (430)
.++++||+||++||++|+.+.|.+.++++++++.++.|+.|+++. + ..++ +.|+|.++|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDAT-GQVQ-QRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTT-SHHH-HHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECch-HHHH-HHhCCCCcc
Confidence 578999999999999999999999999999986579999999987 4 7899 999999999
Q ss_pred EEEEEeCCCcceeecCCC-CCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPSE-KRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~gg-~~~~~~l~~~i~~~ 429 (430)
++++++..+.+...+.|. ..+.+++.+.+++.
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhh
Confidence 988886555444555552 45677788777654
No 149
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.32 E-value=6.3e-12 Score=106.28 Aligned_cols=87 Identities=20% Similarity=0.376 Sum_probs=70.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHH---HHHHHcCCCeEEEEEEcCCCchHH------------------------HHH
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIE---LAEQLEGMGVKVGKFRADGDHKEF------------------------AKQ 389 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~---la~~~~~~~v~~~~Vd~~~~~~~l------------------------~~~ 389 (430)
.++++||+||++||++|+.+.|.+.+ +.+.+++.++.++.|+++.. ++. + +
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 103 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDEN-REEWATKAVYMPQGWIVGWNKAGDIRTR-Q 103 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSC-HHHHHHHHTTSCTTCEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCC-HHHHHHHHHHcCCCcceeeCCccchhhH-H
Confidence 57899999999999999999999988 88888765799999999866 433 2 3
Q ss_pred hCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 390 KLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 390 ~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.|+|.++|++++++..+. +.+ + ..+.++|.++|+++
T Consensus 104 ~~~v~~~P~~~lid~~G~--i~~-~-~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKR--VIL-K-DTSMEQLIDYLATQ 139 (142)
T ss_dssp CSCCCSSSEEEEECTTCB--EEE-C-SCCHHHHHHHHHC-
T ss_pred HcCCCCCCeEEEECCCCC--EEe-c-CCCHHHHHHHHHHH
Confidence 899999999999965442 333 2 37899999999865
No 150
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.32 E-value=7.7e-12 Score=106.11 Aligned_cols=88 Identities=16% Similarity=0.279 Sum_probs=72.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHH-cCCCeEEEEEEcCCC------------------------chHHHHHhC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQL-EGMGVKVGKFRADGD------------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~-~~~~v~~~~Vd~~~~------------------------~~~l~~~~~ 391 (430)
.++++||+||++||++|+.+.|.+.++++++ ++.++.|+.|+++.. +..++ +.|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETA-KQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-HHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHH-Hhc
Confidence 5789999999999999999999999999999 665699999998874 14788 899
Q ss_pred CCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 QLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|.++|++++++.+++ .... . .+.++|.++|+++
T Consensus 111 ~v~~~P~~~lid~~G~-i~~~-~--~~~~~l~~~l~~l 144 (148)
T 3fkf_A 111 AILTLPTNILLSPTGK-ILAR-D--IQGEALTGKLKEL 144 (148)
T ss_dssp TCCSSSEEEEECTTSB-EEEE-S--CCHHHHHHHHHHH
T ss_pred CCCCcCEEEEECCCCe-EEEe-c--CCHHHHHHHHHHH
Confidence 9999999999954443 2322 2 2788899988875
No 151
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.32 E-value=7.6e-12 Score=107.30 Aligned_cols=88 Identities=16% Similarity=0.263 Sum_probs=70.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC------------------------chHHHHHhCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD------------------------HKEFAKQKLQ 392 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~------------------------~~~l~~~~~~ 392 (430)
.+++++|+||++||++|+.+.|.++++++++++.++.|+.|+++.. +..++ +.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVL-ESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHH-HHhC
Confidence 4789999999999999999999999999999876699999999872 16788 8999
Q ss_pred CCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 393 LVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|.++|++++++..++....+. +.++|.++|+++
T Consensus 107 v~~~P~~~lid~~G~i~~~~~----~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVAKEL----RGDDLYNTVEKF 139 (152)
T ss_dssp CCSSCEEEEECTTSEEEEECC----CTTHHHHHHHHH
T ss_pred CCcCCeEEEECCCCeEEEeeC----CHHHHHHHHHHH
Confidence 999999999954443233332 335677776654
No 152
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.32 E-value=1.1e-11 Score=105.93 Aligned_cols=91 Identities=13% Similarity=0.213 Sum_probs=74.9
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCch----------------------HHHHHhCCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHK----------------------EFAKQKLQLV 394 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~----------------------~l~~~~~~V~ 394 (430)
.++++||+||++||++|+.+.|.+.++++++++.++.++.|+++.+ . .++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 104 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK-TGDAMKFLAQVPAEFTVAFDPKGQTP-RLYGVK 104 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS-HHHHHHHHHHSCCCSEEEECTTCHHH-HHTTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC-HHHHHHHHHHcCCCCceeECCcchhH-HHcCCC
Confidence 5789999999999999999999999999999875699999999876 4 677 889999
Q ss_pred CCCEEEEEeCCCcceeecCCC-CCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSAKPVKYPSE-KRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~~~~~~gg-~~~~~~l~~~i~~~ 429 (430)
++|++++++..+++...+.|. ..+.++|.++|++.
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 105 GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHH
Confidence 999999995544434445442 24678999999875
No 153
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.30 E-value=3.4e-12 Score=99.21 Aligned_cols=73 Identities=18% Similarity=0.215 Sum_probs=61.7
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHH
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDS 421 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~ 421 (430)
++.||++||++|+.++|.+++++..+ +.+||++++ ++++ ++|++. +||+++ .+|+ .+. | ..+.++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~-~~l~-~~~g~~-vPtl~~-~~G~--~v~--g-~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDD-AALE-SAYGLR-VPVLRD-PMGR--ELD--W-PFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTC-HHHH-HHHTTT-CSEEEC-TTCC--EEE--S-CCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCC-HHHH-HHhCCC-cCeEEE-ECCE--EEe--C-CCCHHH
Confidence 68899999999999999998875332 688999999 9999 899998 999988 7777 343 4 589999
Q ss_pred HHHHHHHh
Q 042284 422 LMAFVNAL 429 (430)
Q Consensus 422 l~~~i~~~ 429 (430)
|.++|++.
T Consensus 68 L~~~l~~~ 75 (87)
T 1ttz_A 68 LRAWLDAA 75 (87)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99999864
No 154
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.29 E-value=1.8e-11 Score=108.45 Aligned_cols=90 Identities=14% Similarity=0.317 Sum_probs=72.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCe------EEEEEEcCC-CchHHHHHhC------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGV------KVGKFRADG-DHKEFAKQKL------------------ 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v------~~~~Vd~~~-~~~~l~~~~~------------------ 391 (430)
.++++||+||++||++|+.+.|.|+++++++++.++ .|+.|+++. . ++.. ++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~-~~~~-~~~~~~~~~~~~~~~d~~~~~ 135 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYS-RDIA-QDFVTDNGLDYPSIYDPPFMT 135 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCC-HHHH-HHHHHHTTCCSCEEECTTCGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCC-HHHH-HHHHHHcCCCccEEECCcchH
Confidence 578999999999999999999999999999987457 999999998 5 5555 443
Q ss_pred -------CCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 -------QLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 -------~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|.++|+++++...++....+.| ..+.++|.++|+++
T Consensus 136 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 136 AASLGGVPASVIPTTIVLDKQHRPAAVFLR-EVTSKDVLDVALPL 179 (183)
T ss_dssp GGGTTTCCTTCCSEEEEECTTSCEEEEECS-CCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 68999988887554443455666 68999999999875
No 155
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.28 E-value=2.2e-11 Score=104.68 Aligned_cols=86 Identities=14% Similarity=0.233 Sum_probs=70.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchH-----------------------HHHHhCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE-----------------------FAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~-----------------------l~~~~~~V 393 (430)
.++++||+||++||++|+...|.+.++++++++.++.++.|+++.. .+ +. +.|+|
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD-EHFWKTSADNLPWVCVRDANGAYSSYI-SLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC-HHHHHHHHTTCSSEEEECSSGGGCHHH-HHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC-HHHHHHHHhCCCceEEECCCCcchHHH-HHcCc
Confidence 4689999999999999999999999999999875699999999877 43 77 89999
Q ss_pred CCCCEEEEEeCCCcceeecCCCCCCHHHHHHH
Q 042284 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAF 425 (430)
Q Consensus 394 ~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~ 425 (430)
.++|++++++..+++...+.| ..+.++...-
T Consensus 112 ~~~P~~~lid~~G~i~~~~~g-~~~~e~~~~~ 142 (152)
T 2lrt_A 112 TNLPSVFLVNRNNELSARGEN-IKDLDEAIKK 142 (152)
T ss_dssp CSCSEEEEEETTTEEEEETTT-CSCHHHHHHH
T ss_pred ccCceEEEECCCCeEEEecCC-HHHHHHHHHH
Confidence 999999999755544555555 5666665443
No 156
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.28 E-value=1.5e-11 Score=105.44 Aligned_cols=85 Identities=20% Similarity=0.381 Sum_probs=72.5
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc---------------------------CCCchHHHHHhC
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA---------------------------DGDHKEFAKQKL 391 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~---------------------------~~~~~~l~~~~~ 391 (430)
+++||+||++||++|+.+.|.+.++++++ + +.|+.|++ +.. ..++ +.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~--v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~-~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-G--VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP-HEVA-ARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C--CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH-HHHH-TTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-C--CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch-HHHH-HHh
Confidence 89999999999999999999999999999 4 88999998 244 7788 899
Q ss_pred CCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 QLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|.++|++++++..++....+.| ..+.++|.++|+++
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 106 KVLGQPWTFVVDREGKVVALFAG-RAGREALLDALLLA 142 (154)
T ss_dssp SBCSSCEEEEECTTSEEEEEEES-BCCHHHHHHHHHHT
T ss_pred CCCcccEEEEECCCCCEEEEEcC-CCCHHHHHHHHHhc
Confidence 99999999999654443455555 68999999999876
No 157
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=4.4e-12 Score=114.85 Aligned_cols=144 Identities=14% Similarity=0.179 Sum_probs=100.1
Q ss_pred CcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHHH---HHhcCCCC
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQAL---VRTKGLFS 149 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~---~~~~g~~~ 149 (430)
++++|++|||+||+++ +++.+.+.++.++++|+|... ..++++++++++|++++++.......... ....+.
T Consensus 7 ~kv~v~~SGG~DS~~ll~ll~~~g~~v~~~~v~~~~~~--~~~~~~~~a~~lgi~~~~~~~~~~~~~~~~~~~~~~~~-- 82 (203)
T 3k32_A 7 MDVHVLFSGGKDSSLSAVILKKLGYNPHLITINFGVIP--SYKLAEETAKILGFKHKVITLDRKIVEKAADMIIEHKY-- 82 (203)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTTEEEEEEEEECSSSC--TTHHHHHHHHHHTCEEEEEECCTHHHHHHHHHHHHHSS--
T ss_pred CeEEEEEECcHHHHHHHHHHHHcCCCeEEEEEeCCCch--HHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCC--
Confidence 3599999999999776 777777778889999999765 56899999999999998876654322211 112221
Q ss_pred CCccchhhhhhhhchHHHHHHHhcCceEEEeeeccCCcc--cccCCCeeeecCCCCcccCCCCCeEEEecccccchHHHH
Q 042284 150 FYEDGHQECCRIRKVRPLKRALKGLRAWITGQRKDQSPG--TRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQDIW 227 (430)
Q Consensus 150 ~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es~~--~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~dVw 227 (430)
....| ..++...+.+..++++++++|.++||-.. .|..+..+... .+...++||+.|+++||+
T Consensus 83 ----~~~~c-~~~~~~~l~~~A~g~~~i~tGh~~dD~~et~~~~gl~~~~~~----------~~~~iirPLl~~~k~eI~ 147 (203)
T 3k32_A 83 ----PGPAI-QYVHKTVLEILADEYSILADGTRRDDRVPKLSYSEIQSLEMR----------KNIQYITPLMGFGYKTLR 147 (203)
T ss_dssp ----SHHHH-HHHHHHHHHHHTTTCSEEECCCCTTCCSSCCCHHHHHHHHHH----------HTCEEECGGGGCCHHHHH
T ss_pred ----CccHH-HHHHHHHHHHHhcCCCEEEECCCcccchhhcchhhccCcccc----------cCCeEEeccCCCCHHHHH
Confidence 12234 44566677766668899999999998631 12111111100 134567899999999999
Q ss_pred HHHHHcCCCC
Q 042284 228 NFLRAMNIPI 237 (430)
Q Consensus 228 ~yi~~~~lp~ 237 (430)
.|.+++ +++
T Consensus 148 ~~a~~~-l~~ 156 (203)
T 3k32_A 148 HLASEF-FIL 156 (203)
T ss_dssp HHHHHH-EEE
T ss_pred HHHHHh-CCc
Confidence 999988 544
No 158
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=99.26 E-value=8.8e-12 Score=113.96 Aligned_cols=176 Identities=13% Similarity=0.162 Sum_probs=102.1
Q ss_pred CcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCc-hHH------HHHHHh-
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNA-VEV------QALVRT- 144 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~-~~~------~~~~~~- 144 (430)
++++|++|||+||+++ +++.+.+.++.++++|.|....+..++++++++++|++++++.... ..+ ...+..
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~~~~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDMSLLNQLAPNALTRNDIEIE 83 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEECGGGGGGSTGGGC-------
T ss_pred CCEEEEccCcHHHHHHHHHHHHcCCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeChHHhhhccccccccccccc
Confidence 4699999999999776 7777777778889999997555668999999999999998775443 110 000100
Q ss_pred cCCCCCCccchhhhhhhhch-HHHHHHHh--cCceEEEeeeccCCcccccCCC----eeeecCCCCcccCCCCCeEEEec
Q 042284 145 KGLFSFYEDGHQECCRIRKV-RPLKRALK--GLRAWITGQRKDQSPGTRAEIP----VVQIDTSFEGIDGGKGSLVKWNP 217 (430)
Q Consensus 145 ~g~~~~~~~~~~~cc~~~K~-~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~----~~~~d~~~~~~~~~~~~~~~~~P 217 (430)
+..... ..+...|...+. .-+.+..+ +.+++++|...+|..+.|...+ .+..-... .. ..+...++|
T Consensus 84 ~~~~~~--~~~~~~~r~~~~~~~~~~~a~~~g~~~i~tG~~~dd~~~~~~~~~~~~~~l~~~~~~-~~---~~~~~ii~P 157 (219)
T 3bl5_A 84 VKDGEL--PSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNL-AM---EKPFVIHTP 157 (219)
T ss_dssp ---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC----CCGGGSHHHHHHHHHHHHH-HH---TSCCEEECT
T ss_pred ccccCC--CCceeechHHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCHHHHHHHHHHHHh-cc---CCCeEEEec
Confidence 000000 011112443333 33344443 6789999999998532221100 11100000 00 023567899
Q ss_pred ccccchHHHHHHHHHcCCC---Cccccc--cCCcccCCcCCCC
Q 042284 218 LANVKGQDIWNFLRAMNIP---INSLHS--QGYISIGCEPCTR 255 (430)
Q Consensus 218 i~dWt~~dVw~yi~~~~lp---~~pLY~--~Gy~siGC~~Ct~ 255 (430)
|++|++.||+.|.+.+||| +..-+. .|..+.+|-.|+.
T Consensus 158 L~~~~K~ei~~~a~~~glp~~~~~~t~sc~~~~~~~~CG~C~~ 200 (219)
T 3bl5_A 158 LMWLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECPA 200 (219)
T ss_dssp TTTCCHHHHHHHHHHTTCHHHHHHHCCCSTTSCCSSCCSCSHH
T ss_pred cccCCHHHHHHHHHHcCCCccchhheeeccCCCCCCCCCCCHH
Confidence 9999999999999999994 222222 2333377777753
No 159
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.26 E-value=2.5e-11 Score=103.92 Aligned_cols=92 Identities=17% Similarity=0.309 Sum_probs=74.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc----------------------hHHHHHhCCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH----------------------KEFAKQKLQLV 394 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~----------------------~~l~~~~~~V~ 394 (430)
.++++||+||++||++|+.+.|.+.++++.+++.++.|+.|+++.+. ..++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVG-KLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHH-HHhCCC
Confidence 57899999999999999999999999999998767999999988641 2377 889999
Q ss_pred CCCEEEEEeCCCcceeecCCC-CCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSAKPVKYPSE-KRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~~~~~~gg-~~~~~~l~~~i~~~ 429 (430)
++|+++++...++....+.|. ..+.+++.++|+++
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 106 GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC
T ss_pred CCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHH
Confidence 999888886554434445552 24678999999876
No 160
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.24 E-value=2.9e-11 Score=118.93 Aligned_cols=106 Identities=11% Similarity=0.204 Sum_probs=89.9
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC--CCchHHHHHhCCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD--GDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~--~~~~~l~~~~~~V~~ 395 (430)
+.|.+++.+++..+.. ...++++|+||++||++|+.+.|.|+++|+.+++ ++.|+.||++ ++ +.++ +.|+|.+
T Consensus 117 p~v~~~~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~-~i~f~~vd~~~~~~-~~~~-~~fgi~~ 191 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFIFIDSDHTDN-QRIL-EFFGLKK 191 (361)
T ss_dssp CSEEECSTTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT-TCEEEEECTTSGGG-HHHH-HHTTCCT
T ss_pred CcceecCcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccC-ceEEEEecCChHHH-HHHH-HHcCCCc
Confidence 4689999999999874 3455789999999999999999999999999998 7999999999 56 8999 9999988
Q ss_pred --CCEEEEEeCCCcceeecC--CCCCCHHHHHHHHHHh
Q 042284 396 --FPTILFFPKHSAKPVKYP--SEKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 --~Ptl~~~~~g~~~~~~~~--gg~~~~~~l~~~i~~~ 429 (430)
+|++++|..|+. ...|. ++..+.++|.+|++++
T Consensus 192 ~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l~~fi~~~ 228 (361)
T 3uem_A 192 EECPAVRLITLEEE-MTKYKPESEELTAERITEFCHRF 228 (361)
T ss_dssp TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHH
T ss_pred cCCccEEEEEcCCc-ccccCCCccccCHHHHHHHHHHH
Confidence 999999998653 34444 3479999999999864
No 161
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.24 E-value=4.1e-11 Score=104.09 Aligned_cols=87 Identities=17% Similarity=0.272 Sum_probs=73.1
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC------------------CCc---------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD------------------GDH--------------- 383 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~------------------~~~--------------- 383 (430)
.++++||+||++||++|+.+.|.+.+++++++ ++.|+.|+++ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 57899999999999999999999999999998 5999999998 330
Q ss_pred ------hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCC-CHHHHHHHHHHh
Q 042284 384 ------KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKR-DVDSLMAFVNAL 429 (430)
Q Consensus 384 ------~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~-~~~~l~~~i~~~ 429 (430)
..++ +.|+|.++|++++++..++ ... .| .. +.++|.++|+++
T Consensus 114 ~~~~d~~~~~-~~~~v~~~P~~~lid~~G~-i~~-~g-~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 114 IMVMDDGSLV-EKFNVRSIDYIVIMDKSSN-VLY-AG-TTPSLGELESVIKSV 162 (165)
T ss_dssp EEEECCSHHH-HHTTCCSSSEEEEEETTCC-EEE-EE-ESCCHHHHHHHHHHC
T ss_pred eEEeChHHHH-HHhCCCCceEEEEEcCCCc-EEE-eC-CCCCHHHHHHHHHHH
Confidence 2778 8999999999999965443 333 44 57 899999999876
No 162
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.23 E-value=2.9e-11 Score=102.53 Aligned_cols=69 Identities=14% Similarity=0.210 Sum_probs=60.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC-CCeEEEEEEcCCC-----------------------chHHHHHhCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRADGD-----------------------HKEFAKQKLQ 392 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Vd~~~~-----------------------~~~l~~~~~~ 392 (430)
.++++||+||++||++|+.+.|.++++++++++ .++.++.|+++.. +..++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLT-TGFD 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHH-HHcC
Confidence 578999999999999999999999999999984 4799999998863 14688 8999
Q ss_pred CCCCCEEEEEe--CCC
Q 042284 393 LVSFPTILFFP--KHS 406 (430)
Q Consensus 393 V~~~Ptl~~~~--~g~ 406 (430)
|.++|++++++ +|+
T Consensus 106 v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 106 VKSIPTLVGVEADSGN 121 (144)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCc
Confidence 99999999997 565
No 163
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.23 E-value=1.9e-11 Score=104.77 Aligned_cols=88 Identities=13% Similarity=0.198 Sum_probs=68.9
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC----------------------chHHHHHhCCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD----------------------HKEFAKQKLQLV 394 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~----------------------~~~l~~~~~~V~ 394 (430)
.+++++|+||++||++|+.+.|.+++++++ + ++.|+.|+++.. +..++ +.|+|.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS-IEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH-HHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH-HhcCcC
Confidence 478999999999999999999999998776 3 588998886532 15788 899999
Q ss_pred CCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|+++++..++.....+.| ..+.++|.++|+++
T Consensus 117 ~~P~~~~id~~G~i~~~~~g-~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 117 GVPETFVVGREGTIVYKLVG-PITPDNLRSVLLPQ 150 (156)
T ss_dssp SSCEEEEECTTSBEEEEEES-CCCHHHHHHTHHHH
T ss_pred ccCeEEEEcCCCCEEEEEeC-CCCHHHHHHHHHHH
Confidence 99987777544433444555 67888888888764
No 164
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.23 E-value=2.5e-11 Score=102.90 Aligned_cols=88 Identities=10% Similarity=0.068 Sum_probs=70.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc-------------------------hHHHHHhC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH-------------------------KEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~-------------------------~~l~~~~~ 391 (430)
.++++||+||++||++|+.+.|.+.+++++|++.++.|+.|+++.+. ..++ +.|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELY-KKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHH-HHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHH-HHc
Confidence 47899999999999999999999999999998667999999988541 2567 889
Q ss_pred CCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 QLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|.++|++++++..++ .+.. . ...+++.++|+++
T Consensus 110 ~v~~~P~~~lid~~G~-i~~~-~--~~~~~l~~~l~~i 143 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGV-IIAA-N--VTPEKLTEILKAI 143 (143)
T ss_dssp TGGGCCCEEEECTTSB-EEEE-S--CCHHHHHHHHTC-
T ss_pred CCCCCCcEEEECCCCE-EEEc-c--CCHHHHHHHHHhC
Confidence 9999999999975443 3332 2 3578888888653
No 165
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.23 E-value=8.5e-11 Score=100.44 Aligned_cols=88 Identities=13% Similarity=0.218 Sum_probs=71.4
Q ss_pred CCCcEEEEEeCCCCHh--HHHHHHHHHHHHHHH-cCCCeEEEEEEcCCCc------------------------hHHHHH
Q 042284 337 REDPWLIVLYAPWCHF--CQAMEGSYIELAEQL-EGMGVKVGKFRADGDH------------------------KEFAKQ 389 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~--C~~~~p~~~~la~~~-~~~~v~~~~Vd~~~~~------------------------~~l~~~ 389 (430)
.++++||+||++||++ |+.+.|.+.++.+++ ++.++.|+.|+++... ..++ +
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVA-K 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-H
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHH-H
Confidence 4789999999999999 999999999999999 6656999999998761 2788 8
Q ss_pred hCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 390 KLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 390 ~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.|+|.++|++++++..++ ..... .+.++|.+.|+++
T Consensus 111 ~~~v~~~P~~~lid~~G~-i~~~~---~~~~~l~~~l~~l 146 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGK-ILAKN---LRGEELKKKIENI 146 (150)
T ss_dssp HTTCCSSSEEEEECTTSB-EEEES---CCHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCE-EEEcc---CCHHHHHHHHHHH
Confidence 999999999999955443 33222 2677888877764
No 166
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.22 E-value=2.8e-11 Score=105.42 Aligned_cols=86 Identities=20% Similarity=0.363 Sum_probs=67.6
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc-----------------------CCCchHHHHHhCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA-----------------------DGDHKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~-----------------------~~~~~~l~~~~~~V 393 (430)
.++++||+||++||++|+.+.|.+++++++ ++.++.|++ +.+ ..++ ++|+|
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 123 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGD-GMLG-LDLGV 123 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcc-hHHH-HHcCc
Confidence 689999999999999999999999999875 377888874 444 6788 89999
Q ss_pred CCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++|+++++...+.....+.| ..+.++|.++|+++
T Consensus 124 ~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 124 YGAPETFLIDGNGIIRYRHAG-DLNPRVWEEEIKPL 158 (168)
T ss_dssp CSSSEEEEECTTSBEEEEEES-CCCHHHHHHTTHHH
T ss_pred cccCEEEEECCCCeEEEEEeC-CCCHHHHHHHHHHH
Confidence 999977777544433445555 67888888887754
No 167
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.21 E-value=6.2e-11 Score=100.83 Aligned_cols=69 Identities=14% Similarity=0.270 Sum_probs=60.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC-CCeEEEEEEcCCC-----------------------chHHHHHhCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRADGD-----------------------HKEFAKQKLQ 392 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Vd~~~~-----------------------~~~l~~~~~~ 392 (430)
.++++||+||++||++|+.+.|.++++++++++ .++.++.|+++.. +..++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLS-KHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHH-HHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHH-HHhC
Confidence 578999999999999999999999999999983 4799999998864 14688 8999
Q ss_pred CCCCCEEEEEe--CCC
Q 042284 393 LVSFPTILFFP--KHS 406 (430)
Q Consensus 393 V~~~Ptl~~~~--~g~ 406 (430)
|.++||+++++ +|+
T Consensus 106 v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 VESIPTLIGVDADSGD 121 (146)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCe
Confidence 99999999998 565
No 168
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=99.20 E-value=8.7e-11 Score=119.46 Aligned_cols=149 Identities=17% Similarity=0.164 Sum_probs=104.8
Q ss_pred CcEEEEechhHHHHHH-HHHHh----cCCCcEEEEecCCCC---CHHHHHHHHHHHHHhCCcEEEEccCchHHHHHHHhc
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKL----TGRPFRVFSLDTGRL---NPETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRTK 145 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~----~~~~i~vi~~DTg~~---fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~ 145 (430)
++++|++|||+||++| +++.+ .+.++.++|+|.|.. -.+..++++++++++|+++.++.-+... +....
T Consensus 19 ~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~~~~~~---~~~~~ 95 (464)
T 3a2k_A 19 AAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPA---FQRSA 95 (464)
T ss_dssp SBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEECCCHH---HHTTT
T ss_pred CEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEEechhh---hhhcc
Confidence 5799999999999776 66665 466788999999986 2467899999999999999887655432 22122
Q ss_pred CCCCCCccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCccc-------ccCC----CeeeecCCCCcccCCCCCe
Q 042284 146 GLFSFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGT-------RAEI----PVVQIDTSFEGIDGGKGSL 212 (430)
Q Consensus 146 g~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~-------R~~~----~~~~~d~~~~~~~~~~~~~ 212 (430)
+ .+....|...+...+.+... +++.+++|+.++|.. . |..- ..+.....+ ++.
T Consensus 96 ~------~~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~dD~a-Et~L~~l~rG~g~~gL~gm~~~~~~-------~~~ 161 (464)
T 3a2k_A 96 G------LGAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQV-ETILMRLVRGSTSKGYAGIPVKRPF-------HGG 161 (464)
T ss_dssp T------CCSHHHHHHHHHHHHHHHHHTTTCCEEECCCCHHHHH-HHHHHHHHHCCCSSSTTCSCSEEEC-------SSS
T ss_pred C------CCHHHHHHHHHHHHHHHHHHHcCcCEEEEeCChHHHH-HHHHHHHHcCCCcccccCCCccccC-------CCC
Confidence 2 13345566667777777776 567899999998753 2 1110 000000000 123
Q ss_pred EEEecccccchHHHHHHHHHcCCCCcc
Q 042284 213 VKWNPLANVKGQDIWNFLRAMNIPINS 239 (430)
Q Consensus 213 ~~~~Pi~dWt~~dVw~yi~~~~lp~~p 239 (430)
..++||++|+.+||..|.+.+|||+..
T Consensus 162 ~iiRPLl~~~k~eI~~ya~~~gl~~~~ 188 (464)
T 3a2k_A 162 YLIRPFLAVSRAEIEAYCRQMGLSPRC 188 (464)
T ss_dssp EEECGGGGSCHHHHHHHHHHTCCSSCS
T ss_pred EEECCCccCcHHHHHHHHHHcCCCeEE
Confidence 578999999999999999999999854
No 169
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=99.19 E-value=3.1e-11 Score=119.83 Aligned_cols=149 Identities=17% Similarity=0.223 Sum_probs=95.6
Q ss_pred cEEEEechhHHHHHH-HHHHhc-CCCcEEEEecCCCCCHHHHHHHHHHHHHhCC-cEEEEccCchHH----HHHHHhcCC
Q 042284 75 DIAIAFSGAEDVVLI-EYAKLT-GRPFRVFSLDTGRLNPETHQFFDTVEKHYGI-RIEYTFPNAVEV----QALVRTKGL 147 (430)
Q Consensus 75 ~i~vs~SGGKDS~vl-~l~~~~-~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl-~i~~~~p~~~~~----~~~~~~~g~ 147 (430)
+++|++|||+||+++ +++.+. +.++.++++|+|. ++..++++++++++|+ ++.++....... ...+.....
T Consensus 2 kVvva~SGG~DSsvll~ll~~~~g~~V~av~vd~g~--~~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~~~ 79 (400)
T 1kor_A 2 KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQ--GEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAV 79 (400)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSC--SSCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCC
T ss_pred cEEEEEeChHHHHHHHHHHHHhhCCcEEEEEEeCCC--HHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHhhHHHHHcCCc
Confidence 589999999999776 777776 8888999999997 6678999999999999 677664432111 112222111
Q ss_pred CC--CC--ccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEeccccc
Q 042284 148 FS--FY--EDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANV 221 (430)
Q Consensus 148 ~~--~~--~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dW 221 (430)
+. +. ....+.|.. ..+.++.+ +++++++|.+++.....|......... +..-.+.||.+|
T Consensus 80 ~e~~y~~g~~~~R~~~~----~~L~~~A~~~G~~~IatG~~~d~nDq~~f~~g~~~l~----------p~l~ii~PL~~~ 145 (400)
T 1kor_A 80 YEGYYLLGTSIARPLIA----KHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALK----------PDIKVIAPWREW 145 (400)
T ss_dssp BTTTBCCTTTTHHHHHH----HHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGGTC
T ss_pred cccccccCCccchHHHH----HHHHHHHHHcCCCEEEECCCCCcccHHHHHHHHHhcC----------CCCEEEEeeccc
Confidence 00 00 111233332 34444444 678999999986110022211111111 134458999999
Q ss_pred ---chHHHHHHHHHcCCCCcc
Q 042284 222 ---KGQDIWNFLRAMNIPINS 239 (430)
Q Consensus 222 ---t~~dVw~yi~~~~lp~~p 239 (430)
++.||+.|++++|||+..
T Consensus 146 ~~~tK~eI~~ya~~~gip~~~ 166 (400)
T 1kor_A 146 SFQGRKEMIAYAEAHGIPVPV 166 (400)
T ss_dssp CCCSHHHHHHHHHHTTCCCC-
T ss_pred ccCCHHHHHHHHHHcCCCccc
Confidence 999999999999999874
No 170
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.19 E-value=1e-10 Score=100.74 Aligned_cols=100 Identities=15% Similarity=0.197 Sum_probs=77.1
Q ss_pred chHHHHHHhc-CCCCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcCCC-chHHHHHhCCCCCCCEEE
Q 042284 326 TGIENLARLQ-NREDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRADGD-HKEFAKQKLQLVSFPTIL 400 (430)
Q Consensus 326 ~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~~~-~~~l~~~~~~V~~~Ptl~ 400 (430)
.+|++.+... ..+|++||+||++||..|+.|.... .++++.++. ++.++++|.+.. +..+. ++|+|.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~-~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYI-QFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHH-HHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHH-HHcCCCCCCEEE
Confidence 5677766432 3589999999999999999998765 677777755 699999999764 24678 899999999999
Q ss_pred EEeCC-CcceeecCCCCCCHHHHHHHHHHh
Q 042284 401 FFPKH-SAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 401 ~~~~g-~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|++.. +...... ++ .++++|.++|+++
T Consensus 107 fld~~~G~~l~~~-~g-~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 107 ILDPRTGQKLVEW-HQ-LDVSSFLDQVTGF 134 (153)
T ss_dssp EECTTTCCCCEEE-SS-CCHHHHHHHHHHH
T ss_pred EEeCCCCcEeeec-CC-CCHHHHHHHHHHH
Confidence 99763 3323334 44 8999999988764
No 171
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.19 E-value=6.5e-11 Score=100.21 Aligned_cols=69 Identities=17% Similarity=0.305 Sum_probs=60.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC-CCeEEEEEEcCCC-----------------------chHHHHHhCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRADGD-----------------------HKEFAKQKLQ 392 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Vd~~~~-----------------------~~~l~~~~~~ 392 (430)
.++++||+||++||++|+.+.|.++++++++++ .++.++.|+++.. +..++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELG-KTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHH-HHcC
Confidence 578999999999999999999999999999983 4799999998864 14678 8999
Q ss_pred CCCCCEEEEEe--CCC
Q 042284 393 LVSFPTILFFP--KHS 406 (430)
Q Consensus 393 V~~~Ptl~~~~--~g~ 406 (430)
|.++||+++++ +|+
T Consensus 106 v~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 106 VESIPTLITINADTGA 121 (144)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCe
Confidence 99999999998 565
No 172
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=99.19 E-value=9.3e-11 Score=118.16 Aligned_cols=157 Identities=15% Similarity=0.177 Sum_probs=105.6
Q ss_pred HHHHHHHcCCcEEEEechhHHHHHH-HHHHh-----cCCCcEEEEecCCCC--CHHHHHHHHHHHHHhCCcEEEEccCch
Q 042284 65 MDKAFQKFGNDIAIAFSGAEDVVLI-EYAKL-----TGRPFRVFSLDTGRL--NPETHQFFDTVEKHYGIRIEYTFPNAV 136 (430)
Q Consensus 65 i~~~~~~~~~~i~vs~SGGKDS~vl-~l~~~-----~~~~i~vi~~DTg~~--fpet~~~~~~~~~~~gl~i~~~~p~~~ 136 (430)
+...+.. +++++|++|||+||++| +++.+ .+.++.++|+|.|.. ..+..++++++++++|++++++.-+..
T Consensus 6 l~~~l~~-~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~~~~~ 84 (433)
T 1ni5_A 6 LNRQLLT-SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLA 84 (433)
T ss_dssp HHHHHTT-CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred HHHhcCC-CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEecCC
Confidence 3444444 45699999999999776 66665 345688899999975 346789999999999999988754431
Q ss_pred HHHHHHHhcCCCCCCccchhhhhhhhchHHHHHHHhcCceEEEeeeccCCccc------ccC-CCeeeecCCCCcccCCC
Q 042284 137 EVQALVRTKGLFSFYEDGHQECCRIRKVRPLKRALKGLRAWITGQRKDQSPGT------RAE-IPVVQIDTSFEGIDGGK 209 (430)
Q Consensus 137 ~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es~~~------R~~-~~~~~~d~~~~~~~~~~ 209 (430)
..| .+....|...+-..+.+...+.+.+++|+.++|...+ |.. ...+..-+.. . ..
T Consensus 85 -------~~~------~~~e~~aR~~Ry~~l~~~a~~~~~i~tgH~~dD~aEt~L~~l~RG~g~~gL~gm~~~---~-~~ 147 (433)
T 1ni5_A 85 -------QEG------LGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEV---S-EF 147 (433)
T ss_dssp -------CSS------STTTTHHHHHHHHHHHHTCCTTEEEECCCCHHHHHHHHHHHHTTTCCTTGGGCCCSE---E-EE
T ss_pred -------CCC------CCHHHHHHHHHHHHHHHHHhhCCeEEeeccchHHHHHHHHHHHcCCCcccccCCCCc---c-cc
Confidence 111 1233456666666676666677899999999885311 111 0000000000 0 00
Q ss_pred CCeEEEecccccchHHHHHHHHHcCCCCcc
Q 042284 210 GSLVKWNPLANVKGQDIWNFLRAMNIPINS 239 (430)
Q Consensus 210 ~~~~~~~Pi~dWt~~dVw~yi~~~~lp~~p 239 (430)
++...++||++|+.+||..|.+.+|||+..
T Consensus 148 ~~~~iiRPLl~~~k~eI~~y~~~~gl~~~~ 177 (433)
T 1ni5_A 148 AGTRLIRPLLARTRGELVQWARQYDLRWIE 177 (433)
T ss_dssp TTEEEECGGGSCCHHHHHHHHHHTTCCCBC
T ss_pred CCceEEccCccCCHHHHHHHHHHcCCCeEE
Confidence 135678999999999999999999999843
No 173
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.18 E-value=7.8e-11 Score=105.29 Aligned_cols=90 Identities=18% Similarity=0.279 Sum_probs=72.6
Q ss_pred CCC-cEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC-----------------------------CCchHH
Q 042284 337 RED-PWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD-----------------------------GDHKEF 386 (430)
Q Consensus 337 ~~k-~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~-----------------------------~~~~~l 386 (430)
.++ ++||+||++||++|+.+.|.++++.+++++.++.|+.|+++ .+ ..+
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~ 122 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDET-QEV 122 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-CHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCc-hHH
Confidence 355 59999999999999999999999999998756999999984 23 578
Q ss_pred HHHhCCCCCCCEEEEEeCCCcceee---------cCCCCCCHHHHHHHHHHh
Q 042284 387 AKQKLQLVSFPTILFFPKHSAKPVK---------YPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 387 ~~~~~~V~~~Ptl~~~~~g~~~~~~---------~~gg~~~~~~l~~~i~~~ 429 (430)
+ +.|+|.++|++++++..+.+... +.| ..+.++|.+.|+++
T Consensus 123 ~-~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g-~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 123 A-KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGI-PVTGESIRAALDAL 172 (196)
T ss_dssp H-HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCC-CCCCHHHHHHHHHH
T ss_pred H-HHhCCCCCCeEEEEcCCCeEEEccccCcccccccC-ccCHHHHHHHHHHH
Confidence 8 89999999999999654433333 233 56888999988865
No 174
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.18 E-value=1e-10 Score=101.99 Aligned_cols=67 Identities=16% Similarity=0.335 Sum_probs=59.9
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC-CCeEEEEEEcCCCc-----------------------hHHHHHhCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRADGDH-----------------------KEFAKQKLQ 392 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Vd~~~~~-----------------------~~l~~~~~~ 392 (430)
.++++||+||++||++|+.+.|.++++++++++ .++.|+.|+++... ..++ +.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALT-KKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHH-HHcC
Confidence 478999999999999999999999999999986 47999999988761 4678 8999
Q ss_pred CCCCCEEEEEeC
Q 042284 393 LVSFPTILFFPK 404 (430)
Q Consensus 393 V~~~Ptl~~~~~ 404 (430)
|.++|++++++.
T Consensus 126 v~~~Pt~~lid~ 137 (165)
T 3s9f_A 126 VESIPTLIGLNA 137 (165)
T ss_dssp CCSSSEEEEEET
T ss_pred CCCCCEEEEEeC
Confidence 999999999984
No 175
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.17 E-value=9.9e-11 Score=114.57 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=75.2
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC---------------------------CchHHHHH
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG---------------------------DHKEFAKQ 389 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~---------------------------~~~~l~~~ 389 (430)
.++++||+||++||++|+.+.|.++++++++++.++.|+.|+++. + ..++ +
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~-~~l~-~ 158 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNN-YATW-T 158 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTT-SHHH-H
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCc-HHHH-H
Confidence 478999999999999999999999999999987569999998753 2 5788 8
Q ss_pred hCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 390 KLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 390 ~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+|+|.++|++++++..+++...+.| ..+.++|.++|+++
T Consensus 159 ~ygV~~~Pt~~lID~~G~Iv~~~~G-~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDATGTVRHIKFG-EGDYNVTETLVRQL 197 (352)
T ss_dssp HTTCCEESEEEEECTTSBEEEEEES-BCCHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 9999999999999554444455555 67899999998865
No 176
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.16 E-value=9.5e-11 Score=103.36 Aligned_cols=87 Identities=21% Similarity=0.325 Sum_probs=68.6
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC----------------------chHHHHHhCCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD----------------------HKEFAKQKLQLV 394 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~----------------------~~~l~~~~~~V~ 394 (430)
.++++||+||++||++|+.+.|.+++++++ ++.|+.|++++. +..++ +.|+|.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLG-LDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHH-HHcCCC
Confidence 478999999999999999999999999876 388888885332 15677 889999
Q ss_pred CCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|++++++..+.+...+.| ..+.++|.++|+++
T Consensus 132 ~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRHKIVG-VVDQKVWREQLAPL 165 (176)
T ss_dssp SSCEEEEECTTCBEEEEEES-CCCHHHHHHHTHHH
T ss_pred CCCeEEEECCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 99998888655544455555 57888888877654
No 177
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=99.13 E-value=2.7e-10 Score=105.14 Aligned_cols=160 Identities=13% Similarity=0.075 Sum_probs=95.6
Q ss_pred CcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCc-EEEEccCc-hHHH-HHHHhcC--C
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIR-IEYTFPNA-VEVQ-ALVRTKG--L 147 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~-i~~~~p~~-~~~~-~~~~~~g--~ 147 (430)
++++|++|||+||+++ +++.+.+.++..+++|.|....+-.++++++++++|++ ++++.-+. ..+. ..+.... .
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~~~~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~~~~l~~~~~~~l~~~~~~v 82 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDSIPV 82 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEECTHHHHTSHHHHHHTTCCC
T ss_pred CCEEEEecCcHHHHHHHHHHHHcCCCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEeChhHHHHhhhhcccccccc
Confidence 3699999999999776 77777777788899999976667789999999999998 87775441 1111 1111111 1
Q ss_pred CC--CCcc-chhhhhhhhch--HHH-HHHHh--cCceEEEeeeccCCcccccCCC----eeeecCCCCcccCCCCCeEEE
Q 042284 148 FS--FYED-GHQECCRIRKV--RPL-KRALK--GLRAWITGQRKDQSPGTRAEIP----VVQIDTSFEGIDGGKGSLVKW 215 (430)
Q Consensus 148 ~~--~~~~-~~~~cc~~~K~--~pl-~~~~~--~~~~~i~G~R~~Es~~~R~~~~----~~~~d~~~~~~~~~~~~~~~~ 215 (430)
+. .... .+..|...++. ..+ ..+.. +.+.+++|..++|..+.+...+ .+..-..+. ...+...+
T Consensus 83 ~~~~~~~~~~~~~~~~~R~~~~~~la~~~A~~~g~~~I~~G~~~~D~~~~~~~r~~~~~~~~~~~~~~----~~~~~~i~ 158 (232)
T 2pg3_A 83 PDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLG----IARDIRFE 158 (232)
T ss_dssp CC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHHHH----HTSCCEEE
T ss_pred cccccccCCCCCCeEechHHHHHHHHHHHHHHcCcCEEEEccCccccCCCCCCCHHHHHHHHHHHHHh----CCCCeEEE
Confidence 10 0011 11122222221 112 22222 6789999999998531222110 000000000 00134568
Q ss_pred ecccccchHHHHHHHHHcCC-CC
Q 042284 216 NPLANVKGQDIWNFLRAMNI-PI 237 (430)
Q Consensus 216 ~Pi~dWt~~dVw~yi~~~~l-p~ 237 (430)
+||.+|++.||+.|.+++|+ |+
T Consensus 159 ~PL~~~~K~ei~~~a~~~gl~~~ 181 (232)
T 2pg3_A 159 TPLMWLNKAETWALADYYQQLDT 181 (232)
T ss_dssp CTTTTCCHHHHHHHHHHTTCHHH
T ss_pred EecCCCCHHHHHHHHHHcCCCcc
Confidence 99999999999999999999 64
No 178
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.12 E-value=1.6e-10 Score=102.65 Aligned_cols=88 Identities=22% Similarity=0.331 Sum_probs=70.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC-----------------------------CCchHHH
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD-----------------------------GDHKEFA 387 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~-----------------------------~~~~~l~ 387 (430)
.++++||+||++||++|+.+.|.++++++++++. +.|+.|+++ .+ ..++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET-QEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-SHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc-chHH
Confidence 4689999999999999999999999999999885 999999984 23 5788
Q ss_pred HHhCCCCCCCEEEEEeCCCcceeecCCC---------CCCHHHHHHHHHHh
Q 042284 388 KQKLQLVSFPTILFFPKHSAKPVKYPSE---------KRDVDSLMAFVNAL 429 (430)
Q Consensus 388 ~~~~~V~~~Ptl~~~~~g~~~~~~~~gg---------~~~~~~l~~~i~~~ 429 (430)
+.|+|.++|++++++..+. .... |. ..+.++|.+.|+++
T Consensus 110 -~~~~v~~~P~~~lid~~G~-i~~~-g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 110 -KAYRALRTPEVFLFDERRL-LRYH-GRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp -HHTTCCEESEEEEECTTCB-EEEE-ECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred -HHcCCCCCCeEEEECCCCc-EEEE-EecCCccccccccCHHHHHHHHHHH
Confidence 8999999999999955443 2222 21 23567888888765
No 179
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.11 E-value=5.2e-10 Score=99.09 Aligned_cols=92 Identities=21% Similarity=0.376 Sum_probs=71.8
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc----hHHHHHhCCCC------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH----KEFAKQKLQLV------------------ 394 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~----~~l~~~~~~V~------------------ 394 (430)
.++++||+||++||++|+.+.|.++++.+++++.++.++.|+++..+ ..+. +++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~ 137 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFL-KEANLTRLGYFNDQKAKVFQDLKA 137 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHH-HHTTCCTTCCEECTTCHHHHHHHT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHH-HHcCCCCCceEECCcchHHHHhcc
Confidence 57899999999999999999999999999998557999999988641 3556 667764
Q ss_pred -----CCCEEEEEeCCCcceeecCCC-CCCHHHHHHHHHHh
Q 042284 395 -----SFPTILFFPKHSAKPVKYPSE-KRDVDSLMAFVNAL 429 (430)
Q Consensus 395 -----~~Ptl~~~~~g~~~~~~~~gg-~~~~~~l~~~i~~~ 429 (430)
++|++++++..+++...+.|. ..+.++|.++|+++
T Consensus 138 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 138 IGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp TTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHH
Confidence 899999996554434455552 12478899988865
No 180
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.10 E-value=2.3e-10 Score=106.41 Aligned_cols=93 Identities=15% Similarity=0.319 Sum_probs=75.3
Q ss_pred chHHHHHHhcCCCCcEEEEEeCCC--CHhHHHHHHHHHHHHHHH---cCCC--eEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 326 TGIENLARLQNREDPWLIVLYAPW--CHFCQAMEGSYIELAEQL---EGMG--VKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya~w--C~~C~~~~p~~~~la~~~---~~~~--v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
+.|++++. +-+++++|.||++| |++|+.+.|.++++++.+ ++ + +.|+.+|++++ ++++ ++|+|.++||
T Consensus 15 ~ql~~~~~--~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~-~~~v~~~~vd~d~~-~~~~-~~~gv~~~Pt 89 (243)
T 2hls_A 15 RELRETLA--EMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNG-GKLLKLNVYYRESD-SDKF-SEFKVERVPT 89 (243)
T ss_dssp HHHHHHHT--TCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETT-EESEEEEEEETTTT-HHHH-HHTTCCSSSE
T ss_pred HHHHHHHH--hCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCC-CceeEEEEecCCcC-HHHH-HhcCCCcCCE
Confidence 45555553 34689999999999 999999999999999884 22 2 99999999999 9999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
+++| +| ...|.| ..+.+++..|+..
T Consensus 90 ~~i~-~g---~~~~~G-~~~~~~l~~fv~~ 114 (243)
T 2hls_A 90 VAFL-GG---EVRWTG-IPAGEEIRALVEV 114 (243)
T ss_dssp EEET-TT---TEEEES-CCCTTHHHHHHHH
T ss_pred EEEE-CC---ceeEcC-CCcHHHHHHHHHH
Confidence 9999 55 456656 4556677777654
No 181
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.10 E-value=2.9e-10 Score=103.85 Aligned_cols=91 Identities=14% Similarity=0.275 Sum_probs=71.2
Q ss_pred CCC-cEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC-----------------------------CCchHH
Q 042284 337 RED-PWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD-----------------------------GDHKEF 386 (430)
Q Consensus 337 ~~k-~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~-----------------------------~~~~~l 386 (430)
.++ ++||+||++||++|+.+.|.|+++++++++.++.|+.|+++ .+ ..+
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~-~~~ 135 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDAS-QSV 135 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTT-CHH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCc-cHH
Confidence 356 49999999999999999999999999998866999999994 33 678
Q ss_pred HHHhCCCCCCCEEEEEeCCCcceeec--------CCCCCCHHHHHHHHHHh
Q 042284 387 AKQKLQLVSFPTILFFPKHSAKPVKY--------PSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 387 ~~~~~~V~~~Ptl~~~~~g~~~~~~~--------~gg~~~~~~l~~~i~~~ 429 (430)
+ +.|+|.++|++++++..+++.... ..+..+.++|.+.|+++
T Consensus 136 ~-~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 136 A-KAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp H-HHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred H-HHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHH
Confidence 8 899999999999995544322211 01134578888888765
No 182
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=9.5e-12 Score=107.45 Aligned_cols=88 Identities=9% Similarity=0.101 Sum_probs=65.9
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHH-HHHHHc-CCCeEEEEEEcCCCchHHHHHhCC----------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIE-LAEQLE-GMGVKVGKFRADGDHKEFAKQKLQ---------------------- 392 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~-la~~~~-~~~v~~~~Vd~~~~~~~l~~~~~~---------------------- 392 (430)
.+++++|+||++||++|+.+.|.+.+ +.+.++ ..++.++.|+++.. ++.. ++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~-~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP-LEKV-LAFAKSTGVTYPLGLDPGADIFAKYA 109 (159)
Confidence 57899999999999999999999998 888887 44799999998866 4433 3333
Q ss_pred --CCCCCEEEEEe-CCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 393 --LVSFPTILFFP-KHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 --V~~~Ptl~~~~-~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+.++|++++++ +|+ ....+.| .+.+++.++|+++
T Consensus 110 ~~~~~~P~~~lid~~G~-i~~~~~g--~~~~~l~~~l~~l 146 (159)
T 2ls5_A 110 LRDAGITRNVLIDREGK-IVKLTRL--YNEEEFASLVQQI 146 (159)
Confidence 57799999994 555 2333333 5666777777665
No 183
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=99.09 E-value=4.2e-10 Score=111.09 Aligned_cols=161 Identities=11% Similarity=0.056 Sum_probs=105.5
Q ss_pred CCcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCC--------CHHHHHHHHHHHHHhCCcEEEEccCchHH----H
Q 042284 73 GNDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRL--------NPETHQFFDTVEKHYGIRIEYTFPNAVEV----Q 139 (430)
Q Consensus 73 ~~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~--------fpet~~~~~~~~~~~gl~i~~~~p~~~~~----~ 139 (430)
+.+++|++|||+||+++ +++.+.+.++..+|+|++.+ .++..+.++++++++|++++++....... .
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~~~~~~~~v~~ 88 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNFEKEYWDRVFE 88 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHH
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcCCcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEeChHHHHHHHHH
Confidence 35799999999999776 78888888899999999854 35778999999999999998876543211 1
Q ss_pred HHHHh--cCCCCCCccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCe-ee-ecCC----CCcc-cCC
Q 042284 140 ALVRT--KGLFSFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPV-VQ-IDTS----FEGI-DGG 208 (430)
Q Consensus 140 ~~~~~--~g~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~-~~-~d~~----~~~~-~~~ 208 (430)
.++.+ .|..+ .....|...+|...+.+... +++.++||+.+++.. .+..... +. .+.. |.-. ...
T Consensus 89 ~~l~~y~~G~tp---npc~~C~r~ik~~~l~~~A~~~G~d~IatGH~a~d~~-~~~~~~~l~rg~d~~kdqsyfL~~l~~ 164 (376)
T 2hma_A 89 YFLAEYRAGRTP---NPDVMCNKEIKFKAFLDYAITLGADYVATGHYARVAR-DEDGTVHMLRGVDNGKDQTYFLSQLSQ 164 (376)
T ss_dssp HHHHHHHTTCCC---CHHHHHHHHTTTTHHHHHHHTTTCSEEECCCSEEEEE-CSSSCEEEEECSSTTTCCGGGGTTCCH
T ss_pred HHHHHHhcCCCC---ChHHHHHHHHHHHHHHHHHHhCCCCEEEECcchhhhh-CCCchhhhhhccccccccchhccCCCh
Confidence 11222 22211 12234556678888887776 667999999887741 1111111 11 1110 0000 000
Q ss_pred CCCeEEEecccccchHHHHHHHHHcCCCC
Q 042284 209 KGSLVKWNPLANVKGQDIWNFLRAMNIPI 237 (430)
Q Consensus 209 ~~~~~~~~Pi~dWt~~dVw~yi~~~~lp~ 237 (430)
......+.||.++++.||..|.+++|||+
T Consensus 165 ~~l~~~i~PL~~~~K~eVr~~A~~~gl~~ 193 (376)
T 2hma_A 165 EQLQKTMFPLGHLEKPEVRRLAEEAGLST 193 (376)
T ss_dssp HHHTTEECTTTTCCHHHHHHHHHHTTCTT
T ss_pred hhcCcEEecCcCCCHHHHHHHHHHcCCCc
Confidence 00134789999999999999999999985
No 184
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.08 E-value=2.4e-11 Score=115.18 Aligned_cols=71 Identities=17% Similarity=0.294 Sum_probs=57.0
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC------CCchHHHHHhCCCCCCCEEEEEeCCCcceeecCC
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD------GDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPS 414 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~------~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~g 414 (430)
.+|+||||||++|++++|.|++++++++ .||++ ++ ++++ ++|+|+++||+++ +|+ . +.|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------~Vd~d~~d~~~~~-~~la-~~~gI~~vPT~~i--~G~--~--~~G 264 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTWII--NGR--T--YTG 264 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCSSCSSSCC-CHHH-HTTTCCSTTEEEE--TTE--E--EES
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC-------EEEEeecCchhhH-HHHH-HHcCCcccCeEEE--CCE--E--ecC
Confidence 4689999999999999999999986552 34444 25 8999 9999999999654 665 2 656
Q ss_pred CCCCHHHHHHHHH
Q 042284 415 EKRDVDSLMAFVN 427 (430)
Q Consensus 415 g~~~~~~l~~~i~ 427 (430)
.++.++|.+|++
T Consensus 265 -~~~~~~L~~~l~ 276 (291)
T 3kp9_A 265 -VRSLEALAVASG 276 (291)
T ss_dssp -CCCHHHHHHHTC
T ss_pred -CCCHHHHHHHHC
Confidence 799999999874
No 185
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.66 E-value=1.2e-11 Score=104.47 Aligned_cols=69 Identities=12% Similarity=0.287 Sum_probs=57.9
Q ss_pred CCC-cEEEEEeCCCCHhHHHHHHHHHHHHHHHcC--CCeEEEEEEcCCCc------------------------hHHHHH
Q 042284 337 RED-PWLIVLYAPWCHFCQAMEGSYIELAEQLEG--MGVKVGKFRADGDH------------------------KEFAKQ 389 (430)
Q Consensus 337 ~~k-~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Vd~~~~~------------------------~~l~~~ 389 (430)
.++ +++|+||++||++|+.+.|.+++++++++. .++.++.|+++... ..++ +
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 102 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVT-A 102 (143)
Confidence 456 999999999999999999999999999842 36888888877541 2678 8
Q ss_pred hCCCCCCCEEEEEe-CCC
Q 042284 390 KLQLVSFPTILFFP-KHS 406 (430)
Q Consensus 390 ~~~V~~~Ptl~~~~-~g~ 406 (430)
+|+|.++|++++++ +|+
T Consensus 103 ~~~v~~~P~~~lid~~G~ 120 (143)
T 2lus_A 103 KYGITGIPALVIVKKDGT 120 (143)
Confidence 99999999999997 565
No 186
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.05 E-value=1.2e-09 Score=94.69 Aligned_cols=91 Identities=12% Similarity=0.087 Sum_probs=70.7
Q ss_pred CCCc-EEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC---------------------CCchHHHHHhCCC
Q 042284 337 REDP-WLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD---------------------GDHKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~-vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~---------------------~~~~~l~~~~~~V 393 (430)
.++. ++|+|| ++||++|+...|.+.++++++++.++.++.|++| .. ..++ +.|+|
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 104 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPD-KKIR-ELYGA 104 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTT-SHHH-HHTTC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCc-HHHH-HHcCC
Confidence 4566 999999 9999999999999999999998767999999987 34 6788 89999
Q ss_pred CC----CCEEEEEeCCCcceeecCCC---CCCHHHHHHHHHHh
Q 042284 394 VS----FPTILFFPKHSAKPVKYPSE---KRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~----~Ptl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~ 429 (430)
.+ +|++++++..+++...+.|. ....+++.+.|+++
T Consensus 105 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 105 KGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp CCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred CCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 99 99999996554434444441 23455666666654
No 187
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.04 E-value=3.8e-10 Score=89.97 Aligned_cols=79 Identities=10% Similarity=0.193 Sum_probs=64.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC--CCchHHHHHhCCCCCCCEEEEEeCCCcceeecCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD--GDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPS 414 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~--~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~g 414 (430)
...+++++|+++||++|+.+.+.|++++ . ++.|..||++ ++ ++++ ++|+ .++|++ |.+|+ .... +
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~----~-~i~~~~vdi~~~~~-~el~-~~~g-~~vP~l--~~~g~--~~~~-~ 80 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYK----D-RFILQEVDITLPEN-STWY-ERYK-FDIPVF--HLNGQ--FLMM-H 80 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTS----S-SSEEEEEETTSSTT-HHHH-HHSS-SSCSEE--EESSS--EEEE-S
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhh----h-CCeEEEEECCCcch-HHHH-HHHC-CCCCEE--EECCE--EEEe-c
Confidence 4567899999999999999999998764 2 3899999998 77 8999 8999 999986 45777 3333 3
Q ss_pred CCCCHHHHHHHHHHh
Q 042284 415 EKRDVDSLMAFVNAL 429 (430)
Q Consensus 415 g~~~~~~l~~~i~~~ 429 (430)
..+.++|.++|+++
T Consensus 81 -g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 81 -RVNTSKLEKQLRKL 94 (100)
T ss_dssp -SCCHHHHHHHHHSS
T ss_pred -CCCHHHHHHHHHHH
Confidence 37899999999864
No 188
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.02 E-value=9e-10 Score=113.83 Aligned_cols=96 Identities=11% Similarity=0.130 Sum_probs=79.3
Q ss_pred eEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEE
Q 042284 321 VSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTIL 400 (430)
Q Consensus 321 ~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~ 400 (430)
..++++.++.+.. ...+..++.||++||++|+.+.|.+++++..++ ++.+.+||.+++ ++++ ++|+|.++||++
T Consensus 102 ~~~~~~~~~~i~~--~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~-~~~~-~~~~i~svPt~~ 175 (521)
T 1hyu_A 102 SKEAQSLLEQIRD--IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF-QNEI-TERNVMGVPAVF 175 (521)
T ss_dssp CCSCHHHHHHHHH--CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC-HHHH-HHTTCCSSSEEE
T ss_pred CCCCHHHHHHHHh--cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh-HHHH-HHhCCCccCEEE
Confidence 3456677777643 245677999999999999999999999998876 599999999999 9999 999999999997
Q ss_pred EEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 401 FFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 401 ~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
+ +|+ .+.. | ..+.++|.++|++
T Consensus 176 i--~g~--~~~~-G-~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 176 V--NGK--EFGQ-G-RMTLTEIVAKVDT 197 (521)
T ss_dssp E--TTE--EEEE-S-CCCHHHHHHHHCC
T ss_pred E--CCE--EEec-C-CCCHHHHHHHHhh
Confidence 7 776 3433 5 6889999999754
No 189
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.00 E-value=1.6e-09 Score=94.35 Aligned_cols=91 Identities=14% Similarity=0.140 Sum_probs=71.2
Q ss_pred CCCcEEEEEeCCCCHh-HHHHHHHHHHHHHHHcC----CCeEEEEEEcCCC--c-------------------------h
Q 042284 337 REDPWLIVLYAPWCHF-CQAMEGSYIELAEQLEG----MGVKVGKFRADGD--H-------------------------K 384 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~-C~~~~p~~~~la~~~~~----~~v~~~~Vd~~~~--~-------------------------~ 384 (430)
.++++||+||++||++ |+...|.++++.++++. .++.++.|++|.. . .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999952 3699999998731 0 1
Q ss_pred HHHHHhCCCCCCC---------------EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 385 EFAKQKLQLVSFP---------------TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 385 ~l~~~~~~V~~~P---------------tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++ +.|+|..+| ++++++..+.+...+.| ..+.++|.+.|+++
T Consensus 105 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 162 (171)
T 2rli_A 105 QAS-HSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR-SRSAEQISDSVRRH 162 (171)
T ss_dssp HHH-HHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEES-SCCHHHHHHHHHHH
T ss_pred HHH-HHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECC-CCCHHHHHHHHHHH
Confidence 577 789999888 77777544433444555 67899999888765
No 190
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.99 E-value=1.4e-09 Score=93.92 Aligned_cols=91 Identities=10% Similarity=0.121 Sum_probs=71.3
Q ss_pred CCCcEEEEEeCCCCHh-HHHHHHHHHHHHHHHcC----CCeEEEEEEcCCCc---------------------------h
Q 042284 337 REDPWLIVLYAPWCHF-CQAMEGSYIELAEQLEG----MGVKVGKFRADGDH---------------------------K 384 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~-C~~~~p~~~~la~~~~~----~~v~~~~Vd~~~~~---------------------------~ 384 (430)
.++++||+||++||++ |+...|.++++.+++++ .++.++.|++|... .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999864 36899999887520 1
Q ss_pred HHHHHhCCCCCCC---------------EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 385 EFAKQKLQLVSFP---------------TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 385 ~l~~~~~~V~~~P---------------tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.++ +.|+|..+| +++++...+.....+.| ..+.++|.+.|+++
T Consensus 102 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVA-RAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQ-NKRKGEIAASIATH 159 (164)
T ss_dssp HHH-HTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEET-TCCHHHHHHHHHHH
T ss_pred HHH-HhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence 377 899999999 77777544433444544 67889998888765
No 191
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=98.98 E-value=1.4e-09 Score=102.59 Aligned_cols=155 Identities=14% Similarity=0.112 Sum_probs=98.3
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHhcC-CCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHH
Q 042284 63 EIMDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLTG-RPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQ 139 (430)
Q Consensus 63 ~~i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~~-~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~ 139 (430)
+.|+..+...+ .+++|++|||+||+++ +++.+.. .++..++++++...++..++++++++.+|++++++.... .+.
T Consensus 14 ~~l~~~v~~~~~~~vvv~lSGGiDSsv~~~l~~~~~~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~i~~-~~~ 92 (268)
T 1xng_A 14 DFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAP-YDA 92 (268)
T ss_dssp HHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHH-HHH
T ss_pred HHHHHHHHHhCCCCEEEEccCcHHHHHHHHHHHHhCCCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEeChH-HHH
Confidence 34444444433 5699999999999776 6776664 678899999998788999999999999999987764332 122
Q ss_pred HHHHhcCCCCCCccchhhh--hhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEE
Q 042284 140 ALVRTKGLFSFYEDGHQEC--CRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKW 215 (430)
Q Consensus 140 ~~~~~~g~~~~~~~~~~~c--c~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~ 215 (430)
.+...... . .+...| |...+...+.+... ++.++.+|. ++|.. +. .. ..++ .+...+
T Consensus 93 ~~~~~~~~--~--~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tg~-~~E~~--~G-y~-----t~~g------d~~~~i 153 (268)
T 1xng_A 93 IFSSHFKD--A--SLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSN-KSERM--LG-YG-----TLFG------DLACAI 153 (268)
T ss_dssp HHHHHCTT--C--CHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCC-HHHHH--HT-CS-----CTTT------TTCCSE
T ss_pred HHHHHhhh--c--CCchHHHHHHHHHHHHHHHHHHHCCCEEEECCc-HHHHh--cC-cc-----cccC------CCCeeE
Confidence 33322211 0 111222 22233444444444 455666664 34532 11 10 0110 123468
Q ss_pred ecccccchHHHHHHHHHcCCCC
Q 042284 216 NPLANVKGQDIWNFLRAMNIPI 237 (430)
Q Consensus 216 ~Pi~dWt~~dVw~yi~~~~lp~ 237 (430)
+||.+|++.||+.|.+..|+|.
T Consensus 154 ~PL~~l~K~ev~~la~~~gip~ 175 (268)
T 1xng_A 154 NPIGELFKTEVYELARRLNIPK 175 (268)
T ss_dssp ETTTTSCHHHHHHHHHHTTCCH
T ss_pred EecCCCCHHHHHHHHHHcCCcH
Confidence 9999999999999999999983
No 192
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.97 E-value=2e-09 Score=95.96 Aligned_cols=92 Identities=16% Similarity=0.257 Sum_probs=69.0
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------Cch---HHH-H-----------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------DHK---EFA-K----------------- 388 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------~~~---~l~-~----------------- 388 (430)
.++++||+||++||++|+...|.++++++++++.++.++.|+++. ... +++ +
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 578999999999999999999999999999987569999999873 101 111 0
Q ss_pred -----------HhCCCCCCC------EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 389 -----------QKLQLVSFP------TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 -----------~~~~V~~~P------tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
..|++.++| +++++...+++...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 183 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSP-GASVKDIEKKLIPL 183 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECT-TCCHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 124788899 77777544433445555 67889999988765
No 193
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=98.96 E-value=2.1e-09 Score=100.08 Aligned_cols=157 Identities=13% Similarity=0.068 Sum_probs=96.7
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHH
Q 042284 63 EIMDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQA 140 (430)
Q Consensus 63 ~~i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~ 140 (430)
+.|+..+++.+ ++++|++|||.||+++ +|+.+...+...++++++...++..++++++++++|++++++.-.. .+..
T Consensus 18 ~~l~~~v~~~~~~~vvv~lSGGiDSsv~a~l~~~~~~~~~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~~~~-~~~~ 96 (249)
T 3fiu_A 18 NWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVKTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTISIQP-AYEA 96 (249)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSHHHHHHHHHHHHTTSCEEEEECCCTTSCHHHHHHHHHHHHHHTCEEEECCCHH-HHHH
T ss_pred HHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHHHhCCCCEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEEChH-HHHH
Confidence 34444444444 5799999999999776 7777776665589999987778899999999999999987764322 2333
Q ss_pred HHHhcCCCCCC-ccchhhhh-----hhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCe
Q 042284 141 LVRTKGLFSFY-EDGHQECC-----RIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSL 212 (430)
Q Consensus 141 ~~~~~g~~~~~-~~~~~~cc-----~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~ 212 (430)
+...-. +.+. ......|| ...+..-+....+ ++.++.|| .++|. +........| +.
T Consensus 97 ~~~~~~-~~~~~~~~~~~~~~~Ni~~r~R~~~l~~~A~~~g~~vl~TG-n~sE~---~~G~~t~~gd-----------~~ 160 (249)
T 3fiu_A 97 FLASTQ-SFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTD-NACEW---YMGYFTKFGD-----------GA 160 (249)
T ss_dssp HHHHTG-GGC------CHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCC-CHHHH---HHTCSCTTTT-----------TC
T ss_pred HHHHHH-hhccCCCCcChhHHHHHHHHHHHHHHHHHHHHcCCEEEECC-CHHHH---hcCchhccCC-----------CC
Confidence 322110 0000 01222334 2233334444443 44455566 55553 2221111111 12
Q ss_pred EEEecccccchHHHHHHHHHcCCC
Q 042284 213 VKWNPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 213 ~~~~Pi~dWt~~dVw~yi~~~~lp 236 (430)
--++||.++++.||+.+.+..|||
T Consensus 161 ~~i~PL~~l~K~eVr~lA~~lglp 184 (249)
T 3fiu_A 161 ADILPLVNLKKSQVFELGKYLDVP 184 (249)
T ss_dssp CSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred cceeecccCcHHHHHHHHHHcCCc
Confidence 368999999999999999999987
No 194
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.95 E-value=1.3e-10 Score=88.55 Aligned_cols=61 Identities=16% Similarity=0.260 Sum_probs=48.2
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC-CCchHHHHHhCCCCCCCEEEEEeCCC
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD-GDHKEFAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~-~~~~~l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
-++.||++||++|+.+.|.+++++++++. .+.++.||.+ ++ .+++ ++|++.++||+++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~-~~~~-~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKAR-IAEA-EKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSST-HHHH-HHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhh-HHHH-HHcCCCcCCEEEE--CCE
Confidence 36779999999999999999998766543 3555555554 35 7888 8999999999877 665
No 195
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.95 E-value=2e-09 Score=95.77 Aligned_cols=92 Identities=15% Similarity=0.239 Sum_probs=68.1
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------CchHHHH--H-hC---------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------DHKEFAK--Q-KL--------------- 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------~~~~l~~--~-~~--------------- 391 (430)
.++++||+||++||++|+...|.++++++++++.++.++.|+++. ...++.. + +|
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 578999999999999999999999999999987669999998862 1122220 1 11
Q ss_pred -----------------CCCCCC---EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 -----------------QLVSFP---TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 -----------------~V~~~P---tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++..+| ++++++..+.+...+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g-~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSP-GASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECT-TCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECC-CCCHHHHHHHHHHH
Confidence 234566 88888554443455555 68899999999875
No 196
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=98.95 E-value=1.6e-09 Score=106.88 Aligned_cols=159 Identities=11% Similarity=0.103 Sum_probs=102.2
Q ss_pred CCcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCC--------CHHHHHHHHHHHHHhCCcEEEEccCchHHH----
Q 042284 73 GNDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRL--------NPETHQFFDTVEKHYGIRIEYTFPNAVEVQ---- 139 (430)
Q Consensus 73 ~~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~--------fpet~~~~~~~~~~~gl~i~~~~p~~~~~~---- 139 (430)
+.+++|++|||+||+++ +++.+.+.++..+|+|++.+ .++..+.++++++++|++++++..... ++
T Consensus 17 ~~kVvVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~~~~-f~~~v~ 95 (380)
T 2der_A 17 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAE-YWDNVF 95 (380)
T ss_dssp CCEEEEECCSCSTTHHHHHHHHTTCCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECHHH-HHHHTH
T ss_pred CCEEEEEEEChHHHHHHHHHHHHcCCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeCcHH-HHHHHH
Confidence 35799999999999776 78888888899999998764 246789999999999999988764422 21
Q ss_pred -HHHHh--cCCCCCCccchhhhhhhhchHHHHHHHh---cCceEEEeeeccCCcc-cccCCCeee-ecC----CCCcccC
Q 042284 140 -ALVRT--KGLFSFYEDGHQECCRIRKVRPLKRALK---GLRAWITGQRKDQSPG-TRAEIPVVQ-IDT----SFEGIDG 207 (430)
Q Consensus 140 -~~~~~--~g~~~~~~~~~~~cc~~~K~~pl~~~~~---~~~~~i~G~R~~Es~~-~R~~~~~~~-~d~----~~~~~~~ 207 (430)
..+.+ .|..+ .....|....|...+.+... +++.++||..+++... .|.. .+. .+. .|.-..-
T Consensus 96 ~~~~~ey~~G~tp---npc~~Cnr~ik~~~l~~~A~~~~Gad~IatGH~a~d~~~~~~~~--l~rg~~~~kdqsy~L~~l 170 (380)
T 2der_A 96 ELFLAEYKAGRTP---NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSR--LLRGLDSNKDQSYFLYTL 170 (380)
T ss_dssp HHHHHHHHTTCCC---CHHHHHHHHTTTTHHHHHHHHTTCCSEEECCCSCEEEEETTEEE--EECCSSTTTCCGGGGSSC
T ss_pred HHHHHHHHcCCCC---ChhHHHHHHHHHHHHHHHHHhhcCCCEEEEccccccccccchHH--HhcccccccccceeecCC
Confidence 12222 23211 11224445567777776654 5678999998876310 1111 110 111 0000000
Q ss_pred CCCC-eEEEecccccchHHHHHHHHHcCCCC
Q 042284 208 GKGS-LVKWNPLANVKGQDIWNFLRAMNIPI 237 (430)
Q Consensus 208 ~~~~-~~~~~Pi~dWt~~dVw~yi~~~~lp~ 237 (430)
.... ...+.||.++++.||..|.+++|||+
T Consensus 171 ~~~~l~~~i~PL~~~~K~eVr~~A~~~Gl~~ 201 (380)
T 2der_A 171 SHEQIAQSLFPVGELEKPQVRKIAEDLGLVT 201 (380)
T ss_dssp CHHHHHHEECCGGGSCHHHHHHHHHHTTCC-
T ss_pred ChhhcceeEccCCCCCHHHHHHHHHHcCCCC
Confidence 0001 35789999999999999999999985
No 197
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.95 E-value=1.9e-09 Score=96.56 Aligned_cols=92 Identities=12% Similarity=0.270 Sum_probs=73.4
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC------------------------chHHHHHhC
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD------------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~------------------------~~~l~~~~~ 391 (430)
.++++||+|| ++||++|+...|.+.++++++++.++.|+.|+++.. +..++ +.|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELS-QAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHH-HHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHH-HHh
Confidence 4689999999 999999999999999999999875799999988741 15677 889
Q ss_pred CCC-----CCCEEEEEeCCCcceeecCCC---CCCHHHHHHHHHHh
Q 042284 392 QLV-----SFPTILFFPKHSAKPVKYPSE---KRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ~V~-----~~Ptl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~ 429 (430)
+|. .+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 999 999999996544433334331 23789999998875
No 198
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.95 E-value=2.3e-09 Score=92.33 Aligned_cols=91 Identities=11% Similarity=0.104 Sum_probs=71.0
Q ss_pred CC-cEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-----------------------CchHHHHHhCC
Q 042284 338 ED-PWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-----------------------DHKEFAKQKLQ 392 (430)
Q Consensus 338 ~k-~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-----------------------~~~~l~~~~~~ 392 (430)
++ ++||+|| ++||++|+...|.+.++++++++.++.++.|++|. + ..++ +.|+
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~-~~~~ 112 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPH-GAVS-QAYG 112 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTT-THHH-HHTT
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcC-hHHH-HHcC
Confidence 45 8999998 99999999999999999999976579999998864 4 6788 8999
Q ss_pred CC----CCC--EEEEEeCCCcceeecCCC---CCCHHHHHHHHHHhC
Q 042284 393 LV----SFP--TILFFPKHSAKPVKYPSE---KRDVDSLMAFVNALR 430 (430)
Q Consensus 393 V~----~~P--tl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~~ 430 (430)
|. ++| ++++++..+.+...+.|. ....+++.+.|++++
T Consensus 113 v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 113 VFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 159 (160)
T ss_dssp CEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHTC
T ss_pred CccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 99 999 777775444433444442 236788888888763
No 199
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=98.94 E-value=1e-09 Score=113.17 Aligned_cols=167 Identities=14% Similarity=0.202 Sum_probs=97.6
Q ss_pred CcEEEEechhHHHHHH-HHHHhc-CCCcEEEEecCCCCCH-HHHHHHHHHHHHhCCcEEEEccCchHHHHHHHhcCCCCC
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLT-GRPFRVFSLDTGRLNP-ETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRTKGLFSF 150 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~-~~~i~vi~~DTg~~fp-et~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 150 (430)
++++|++|||+||+++ +|+.+. +.++.++|+|+|...+ |..+.++.+++++|++++++..... +.. ...|.. -
T Consensus 231 ~kvlvalSGGvDSsvla~ll~~~~G~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-~~~--~l~g~~-~ 306 (527)
T 3tqi_A 231 EQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLVDTGLLRLNEVDEVLNVFQKHLGAKVICVDAKDR-FMK--ALKGIS-D 306 (527)
T ss_dssp SCEEEECTTTHHHHHHHHHHHHHHGGGEEEEEECCSCSCTTHHHHHHHHHTTSSCCEEEEECCHHH-HHS--SSSSCC-C
T ss_pred CeEEEEEecCcCHHHHHHHHHHHhCCeEEEEEeccCCCChhHHHHHHHHHHHHcCCcEEEEeChHH-HHH--hhcCCC-C
Confidence 6799999999999776 777765 7789999999998764 5555566699999999987743211 111 011111 0
Q ss_pred CccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccc---cC-CCeeeecCCCCcccCCCCCeEEEecccccchH
Q 042284 151 YEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTR---AE-IPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQ 224 (430)
Q Consensus 151 ~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R---~~-~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~ 224 (430)
+......|+. ....-+.+..+ +++.+++|+..+|-...+ .. ...+.......+.. ...+...+.||.+++++
T Consensus 307 ~~~~r~~~~~-~~~~~~~~~A~~~g~~~la~Gh~~dD~~Et~~~~~g~~~~ik~~~~l~gl~-~~~~~~iirPL~~l~K~ 384 (527)
T 3tqi_A 307 PEEKRKIAGE-QFIRVFEEQAKKLNVKWLGQGTIYPDVIESAKTKTGKGHIIKTHHNVGGLP-LNMELKLIEPLRELFKD 384 (527)
T ss_dssp HHHHHHHHHH-HHHHHHHHTTTTTTCCEEECCCCHHHHHCC---------------------------CEECTTTTCCHH
T ss_pred hhhhhhhhHH-HHHHHHHHHHHHcCCCEEEccccCCccccccccCCChhheeeeecccccCc-ccccCccccchhcCCHH
Confidence 1111122222 22344444444 567899999776642111 00 00000000000000 01123467999999999
Q ss_pred HHHHHHHHcCCCCccccccCCc
Q 042284 225 DIWNFLRAMNIPINSLHSQGYI 246 (430)
Q Consensus 225 dVw~yi~~~~lp~~pLY~~Gy~ 246 (430)
||.+|.+++|||+.-.+++-|+
T Consensus 385 EIr~~a~~lGlp~~~v~~~P~p 406 (527)
T 3tqi_A 385 EVRKLGLELGLPADLIYRHPFP 406 (527)
T ss_dssp HHHHHHHHHTCCHHHHTCCCCC
T ss_pred HHHHHHHHcCCChhhhccCCCC
Confidence 9999999999999777766544
No 200
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.94 E-value=1.6e-09 Score=94.66 Aligned_cols=91 Identities=20% Similarity=0.240 Sum_probs=66.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------Cc---hHHH-H-----------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------DH---KEFA-K----------------- 388 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------~~---~~l~-~----------------- 388 (430)
.++++||+|||+||++|+ ..|.++++++++++.++.++.|+++. .. .+++ +
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 578999999999999999 99999999999987569999998741 10 1111 0
Q ss_pred -----------HhCCCCCCC------EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 389 -----------QKLQLVSFP------TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 -----------~~~~V~~~P------tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+.|++.++| ++++++..+++...+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSS-LTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCC-CCCHHHHHHHHHHH
Confidence 247888999 77777544433445555 57788888888765
No 201
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.93 E-value=3.2e-09 Score=92.12 Aligned_cols=91 Identities=18% Similarity=0.201 Sum_probs=66.6
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------Cc---hHH-HHHhC--------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------DH---KEF-AKQKL-------------- 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------~~---~~l-~~~~~-------------- 391 (430)
.++++||+||++||++|+...|.++++++++++.++.++.|+++. .. .++ . +++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVT-EKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH-HHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHH-HhcCCCCceEEEEeecC
Confidence 578999999999999999999999999999987569999999863 10 112 1 111
Q ss_pred ---------------C-----CCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 ---------------Q-----LVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ---------------~-----V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+ |..+|+++++...++....+.| ..+.++|.+.|+++
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSP-TTAPYDIEGDIMEL 165 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCC-CCCHHHHHHHHHHH
Confidence 3 4446888888654443455555 56778888888765
No 202
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=98.93 E-value=1.9e-09 Score=101.04 Aligned_cols=146 Identities=15% Similarity=0.173 Sum_probs=92.5
Q ss_pred CcEEEEechhHHHHHH-HHHHhcC--CCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHHHHHhcCCCCC
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLTG--RPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRTKGLFSF 150 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~~--~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 150 (430)
.+++|++|||+||+++ +++.+.. .++.++++|+|.. +..++++++++++|++++++..... +..+.......
T Consensus 23 ~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~--~~~~~a~~~a~~lgi~~~~i~i~~~-~~~~~~~l~~~-- 97 (257)
T 2e18_A 23 NGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFEN--KDVEDAKLVAEKLGIGYKVINIKPI-VDSFVENLELN-- 97 (257)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCS--THHHHHHHHHHHHTCEEEECCCHHH-HHHHHHHHCSC--
T ss_pred CcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCc--hHHHHHHHHHHHhCCCEEEEEChHH-HHHHHHHhccc--
Confidence 5699999999999776 6776653 5788999999954 7789999999999999877643321 22232222110
Q ss_pred Cccchhhhhhh---hchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEecccccchHH
Q 042284 151 YEDGHQECCRI---RKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQD 225 (430)
Q Consensus 151 ~~~~~~~cc~~---~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~d 225 (430)
..+... |.. .+...+.+... +..++.+|...+.. +.... .++ .+...++||.+|++.|
T Consensus 98 -~~~~~~-~n~~ar~r~~~l~~~A~~~g~~vl~tg~~~e~~---~Gy~t------~~g------~~~~~i~Pl~~l~K~e 160 (257)
T 2e18_A 98 -LDRKGL-GNIMSRTRMIMLYAHANSLGRIVLGTSNRSEFL---TGYFT------KWG------DGASDYAPIINLYKTE 160 (257)
T ss_dssp -CCHHHH-HHHHHHHHHHHHHHHHHHHTCEEECCCCHHHHH---HTCSC------TTS------TTCSSBCTTTTSCHHH
T ss_pred -cccchh-HHHHHHHHHHHHHHHHHHcCCEEEEcCchhHHh---cCCee------ccC------CCccCEeecCCCcHHH
Confidence 011112 333 33344444443 55577777654432 11100 110 1234689999999999
Q ss_pred HHHHHHHcCCCCcccc
Q 042284 226 IWNFLRAMNIPINSLH 241 (430)
Q Consensus 226 Vw~yi~~~~lp~~pLY 241 (430)
|+.|.+.+|+|+.-+.
T Consensus 161 v~~la~~~gip~~i~~ 176 (257)
T 2e18_A 161 VWEIAKRIGVPERIVK 176 (257)
T ss_dssp HHHHHHHHTCCHHHHH
T ss_pred HHHHHHHcCCCHHHhC
Confidence 9999999999965443
No 203
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.92 E-value=2.2e-09 Score=93.30 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=68.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------Cc---hHHHHH-hC--------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------DH---KEFAKQ-KL-------------- 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------~~---~~l~~~-~~-------------- 391 (430)
.++++||+||++||++|+...|.++++++++++.++.++.|+++. .. .+++ + ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFV-CTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHH-HHhcCCCceeEeeeccCC
Confidence 578999999999999999999999999999987569999999863 11 2233 3 33
Q ss_pred ---------------CC--CCCC---EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 ---------------QL--VSFP---TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ---------------~V--~~~P---tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++ .++| ++++++..+++...+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYP-TTSPLSLERDIKQL 166 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCC-CCCHHHHHHHHHHH
Confidence 34 5678 77777544443445555 57888898888875
No 204
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.92 E-value=1.6e-09 Score=96.30 Aligned_cols=92 Identities=15% Similarity=0.229 Sum_probs=72.4
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC------------------------chHHHHHhC
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD------------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~------------------------~~~l~~~~~ 391 (430)
.++++||+|| ++||++|+...|.+.++++++++.++.++.|+++.. +..++ +.|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTIS-RQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHH-HHh
Confidence 4689999999 999999999999999999999865699999988741 25688 899
Q ss_pred CCC------CCCEEEEEeCCCcceeecCCC---CCCHHHHHHHHHHh
Q 042284 392 QLV------SFPTILFFPKHSAKPVKYPSE---KRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ~V~------~~Ptl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~ 429 (430)
+|. .+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 999 999999995444333334331 13688888888765
No 205
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.92 E-value=1.2e-09 Score=97.94 Aligned_cols=92 Identities=12% Similarity=0.269 Sum_probs=73.1
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| ++||++|+...|.+.++++++++.++.++.|++|.. +.+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS- 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH-
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH-
Confidence 4689999999 999999999999999999999765699999988741 15788
Q ss_pred HhCCCC-----CCCEEEEEeCCCcceeecCCC---CCCHHHHHHHHHHh
Q 042284 389 QKLQLV-----SFPTILFFPKHSAKPVKYPSE---KRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~-----~~Ptl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 899999 999999997555433334331 13688899988865
No 206
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.91 E-value=3.2e-09 Score=81.31 Aligned_cols=75 Identities=13% Similarity=0.286 Sum_probs=59.2
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc---hHHHHHhCC--CCCCCEEEEEeCCCcceeecCCC
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH---KEFAKQKLQ--LVSFPTILFFPKHSAKPVKYPSE 415 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~---~~l~~~~~~--V~~~Ptl~~~~~g~~~~~~~~gg 415 (430)
-++.|+++||++|+.+.+.|++++.++++ +.+..+|++++. .++. ++++ +.++|++ |.+|+ .+ ++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~--i~~~~vdi~~~~~~~~~l~-~~~~~~~~~vP~i--~~~g~--~i---~~ 71 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQ-QKAGKPVETVPQI--FVDQQ--HI---GG 71 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHH-HHTCCCSCCSCEE--EETTE--EE---ES
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCCC--ceEEEEecccChHHHHHHH-HHhCCCCceeCeE--EECCE--EE---EC
Confidence 36779999999999999999999988765 899999987651 3788 8898 9999998 34665 33 22
Q ss_pred CCCHHHHHHHHHH
Q 042284 416 KRDVDSLMAFVNA 428 (430)
Q Consensus 416 ~~~~~~l~~~i~~ 428 (430)
.++|.+++++
T Consensus 72 ---~~~l~~~~~~ 81 (85)
T 1ego_A 72 ---YTDFAAWVKE 81 (85)
T ss_dssp ---SHHHHHHHHH
T ss_pred ---HHHHHHHHHH
Confidence 2678887764
No 207
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.91 E-value=1.1e-09 Score=95.31 Aligned_cols=90 Identities=19% Similarity=0.187 Sum_probs=70.2
Q ss_pred CCCcEEEEEeCCCCHh-HHHHHHHHHHHHHHHcCC---CeEEEEEEcCCC--c-------------------------hH
Q 042284 337 REDPWLIVLYAPWCHF-CQAMEGSYIELAEQLEGM---GVKVGKFRADGD--H-------------------------KE 385 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~-C~~~~p~~~~la~~~~~~---~v~~~~Vd~~~~--~-------------------------~~ 385 (430)
.++++||+||++||++ |+.+.|.+.++++++++. ++.|+.|+++.. . ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4789999999999997 999999999999988742 599999998743 1 14
Q ss_pred HHHHhCC---------------CCCCCEEEEEeCCCcceeecCCCCC--CHHHHHHHHHHh
Q 042284 386 FAKQKLQ---------------LVSFPTILFFPKHSAKPVKYPSEKR--DVDSLMAFVNAL 429 (430)
Q Consensus 386 l~~~~~~---------------V~~~Ptl~~~~~g~~~~~~~~gg~~--~~~~l~~~i~~~ 429 (430)
++ +.|+ |..+|++++++ .+++...+.| .. +.++|.+.|+++
T Consensus 114 ~~-~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g-~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AA-QTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSP-DKAEATDRVVADLQAL 171 (172)
T ss_dssp HH-HHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECH-HHHTCHHHHHHHHHHC
T ss_pred HH-HhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECC-CCCCCHHHHHHHHHHh
Confidence 55 5555 46789999999 4443445555 45 889999999876
No 208
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.91 E-value=7.2e-10 Score=90.35 Aligned_cols=82 Identities=12% Similarity=0.240 Sum_probs=55.2
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc----hHHHHHhCCCCCCCEEEEEeCCCcceeec
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH----KEFAKQKLQLVSFPTILFFPKHSAKPVKY 412 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~----~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~ 412 (430)
.++++++ ||++||++|+.+.|.|+++.. .+.++.||.+.+. ..++ ++|+|.++||+ |.+|+. ...+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~~~~~~~~~l~-~~~~v~~~Pt~--~~~g~~-v~~~ 87 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA-----SYKVVELDELSDGSQLQSALA-HWTGRGTVPNV--FIGGKQ-IGGC 87 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEE--EETTEE-EECH
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC-----CeEEEEccCCCChHHHHHHHH-HHhCCCCcCEE--EECCEE-ECCh
Confidence 3456666 999999999999999988742 3456555554431 3588 89999999999 457762 2222
Q ss_pred CCCCC---CHHHHHHHHHHh
Q 042284 413 PSEKR---DVDSLMAFVNAL 429 (430)
Q Consensus 413 ~gg~~---~~~~l~~~i~~~ 429 (430)
.+ .. +.++|.++|+++
T Consensus 88 ~~-~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 88 DT-VVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HH-HHHHHHTTCHHHHHHHT
T ss_pred HH-HHHHHhCChHHHHHHHc
Confidence 22 12 445677777653
No 209
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.90 E-value=1.8e-09 Score=95.44 Aligned_cols=91 Identities=16% Similarity=0.164 Sum_probs=67.9
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------Cc---hHHHHHh----------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------DH---KEFAKQK---------------- 390 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------~~---~~l~~~~---------------- 390 (430)
.++++||+||++||++|+...|.++++++++++.++.++.|+++. .. .+++ ++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFA-RRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHH-HhhcCCCceeEeecccCC
Confidence 478999999999999999999999999999987569999999863 10 1233 22
Q ss_pred --------CCCCCCC-------EEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 391 --------LQLVSFP-------TILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 391 --------~~V~~~P-------tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
|.+..+| +++++...+++...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 179 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDP-TVSVEEVRPQITAL 179 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECT-TSCHHHHHHHHHTT
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCC-CCCHHHHHHHHHHH
Confidence 1244678 66666544433445555 67899999999876
No 210
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=98.89 E-value=4.3e-09 Score=97.93 Aligned_cols=155 Identities=10% Similarity=0.084 Sum_probs=97.3
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHhc-CCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHH
Q 042284 62 LEIMDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLT-GRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEV 138 (430)
Q Consensus 62 ~~~i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~-~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~ 138 (430)
...|+..+++.+ ++++|++|||.||+++ +++.+. +.++..++++.+...++..+.++++++.+|++++++.-.. .+
T Consensus 14 ~~~l~d~v~~~g~~~vvv~lSGGiDSsv~a~l~~~~~g~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~i~~-~~ 92 (249)
T 3p52_A 14 CDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCKRALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQS-IL 92 (249)
T ss_dssp HHHHHHHHHTSSCSEEEEECCSSHHHHHHHHHHHHHHTTSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECCCHH-HH
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEECcH-HH
Confidence 445566666655 5799999999999776 677665 7889999999997777888999999999999987664322 12
Q ss_pred HHHHHhcCCCCCCccchhhh--hhhhchHHHHHHHhcCc--eEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEE
Q 042284 139 QALVRTKGLFSFYEDGHQEC--CRIRKVRPLKRALKGLR--AWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVK 214 (430)
Q Consensus 139 ~~~~~~~g~~~~~~~~~~~c--c~~~K~~pl~~~~~~~~--~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~ 214 (430)
..+.. .. +. ..+...| |...+..-+....+... ++.|| .++|.. ... -..++ + ...-
T Consensus 93 ~~~~~-~~-~~--~~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tg-n~se~~---~g~-----~t~~g----d--~~~~ 153 (249)
T 3p52_A 93 DAFIK-QS-EN--TTLVSLGNFAARIRMSLLYDYSALKNSLVIGTS-NKSELL---LGY-----GTIYG----D--LACA 153 (249)
T ss_dssp HHHHT-TC-SC--CCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCC-CHHHHH---HTC-----SCTTT----T--TCCS
T ss_pred HHHHH-hc-cc--cCCccHhHHHHHHHHHHHHHHHHHCCCeEEeCC-CHHHHH---ccc-----hhhhc----c--ccCc
Confidence 22222 11 10 1112223 34444445555554443 33333 333321 111 00111 1 1225
Q ss_pred EecccccchHHHHHHHHHcCCC
Q 042284 215 WNPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 215 ~~Pi~dWt~~dVw~yi~~~~lp 236 (430)
++||.++++.||+++.+..|||
T Consensus 154 i~PL~~l~K~eV~~la~~~gip 175 (249)
T 3p52_A 154 FNPIGSLYKSEIYALAKYLNLH 175 (249)
T ss_dssp EETTTTSCHHHHHHHHHHTTCC
T ss_pred cccccCCcHHHHHHHHHHcCCc
Confidence 8999999999999999999987
No 211
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.86 E-value=5.6e-09 Score=94.62 Aligned_cols=44 Identities=23% Similarity=0.084 Sum_probs=40.6
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD 380 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~ 380 (430)
.++++||+|||+||++|+...|.|++++++|++.++.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 47899999999999999999999999999998756999999986
No 212
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.85 E-value=9.6e-09 Score=92.03 Aligned_cols=92 Identities=12% Similarity=0.248 Sum_probs=72.6
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| ++||++|....|.+.++++++++.++.|+.|+++.. +.+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS- 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH-
Confidence 4689999999 999999999999999999999876799999988741 14678
Q ss_pred HhCCCC------CCCEEEEEeCCCcceeecCCC---CCCHHHHHHHHHHh
Q 042284 389 QKLQLV------SFPTILFFPKHSAKPVKYPSE---KRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~------~~Ptl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.|. .++.+++.+.|+++
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 899998 799999996555433333231 35788999988765
No 213
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.85 E-value=6.4e-09 Score=91.93 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=67.4
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-------Cc---hHHHHHhC---------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-------DH---KEFAKQKL--------------- 391 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-------~~---~~l~~~~~--------------- 391 (430)
.++++||+||++||++|+...|.++++++++++.++.|+.|+++. .. .+++ +++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHH-HHcCCCceEEeeeccCCc
Confidence 478999999999999999999999999999987569999998863 10 1122 222
Q ss_pred ----------------C-----CCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 392 ----------------Q-----LVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ----------------~-----V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+ |..+|++++++..+++...+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECT-TSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCC-CCCHHHHHHHHHHh
Confidence 2 3335998888654443455655 67888998888765
No 214
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.80 E-value=1.2e-08 Score=105.13 Aligned_cols=165 Identities=13% Similarity=0.174 Sum_probs=97.0
Q ss_pred CcEEEEechhHHHHHH-HHHHhc-CCCcEEEEecCCCCCHHHHHHH-HHHHHHhCCcEEEEccCchHHHHHHHhcCCCCC
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLT-GRPFRVFSLDTGRLNPETHQFF-DTVEKHYGIRIEYTFPNAVEVQALVRTKGLFSF 150 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~-~~~i~vi~~DTg~~fpet~~~~-~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 150 (430)
+++++++|||+||+++ +++.+. +.++.++|+|+|.......+.+ +.+++++|++++++.... .+.... .|...
T Consensus 228 ~~vvvalSGGvDSsv~a~ll~~a~G~~v~av~v~~g~~~~~e~~~~~~~la~~lgi~~~~v~~~~-~f~~~l--~~~~~- 303 (525)
T 1gpm_A 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAED-RFLSAL--AGEND- 303 (525)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEECHH-HHHHHH--TTCCC-
T ss_pred cceEEEecCCCCHHHHHHHHHHHhCCCEEEEEEeCCCCCchHHHHHHHHHHHHhCCcEEEEeccH-HHHHhh--cCCCC-
Confidence 6799999999999776 677665 7788999999997654445555 447888999998775432 122211 22210
Q ss_pred CccchhhhhhhhchHHHHHHHh---cCceEEEeeeccCCccc-c----cCCCeeeecCCCCcccCCCCCeEEEecccccc
Q 042284 151 YEDGHQECCRIRKVRPLKRALK---GLRAWITGQRKDQSPGT-R----AEIPVVQIDTSFEGIDGGKGSLVKWNPLANVK 222 (430)
Q Consensus 151 ~~~~~~~cc~~~K~~pl~~~~~---~~~~~i~G~R~~Es~~~-R----~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt 222 (430)
+......|+. ....-+.+..+ +.+.+++|+..+|-... | ..... .......+.. .......+.||.+|+
T Consensus 304 pe~~~~~~~~-~~~~~l~~~A~~~~g~~~l~~Gt~~~D~~E~~~~~~~~s~~i-ks~~~l~gl~-~~~~~~~i~PL~~l~ 380 (525)
T 1gpm_A 304 PEAKRKIIGR-VFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVI-KSHHNVGGLP-KEMKMGLVEPLKELF 380 (525)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHSSSEEEEECCCCHHHHHHTTC------------------------CCEEECTTTTCC
T ss_pred hHHhhhhhhH-HHHHHHHHHHHhcCCCCEEEeCCCCcchhhhcCccccccccc-cccccccccc-cccCCcEEehhhcCC
Confidence 1111112332 33455555555 45689999954331101 1 10000 0000000000 001235689999999
Q ss_pred hHHHHHHHHHcCCCCccccccCC
Q 042284 223 GQDIWNFLRAMNIPINSLHSQGY 245 (430)
Q Consensus 223 ~~dVw~yi~~~~lp~~pLY~~Gy 245 (430)
+.||++|.++.|||+.-++++-|
T Consensus 381 K~EVr~la~~lglp~~i~~~~P~ 403 (525)
T 1gpm_A 381 KDEVRKIGLELGLPYDMLYRHPF 403 (525)
T ss_dssp HHHHHHHHHHTTCCHHHHTSCCC
T ss_pred HHHHHHHHHHcCCCHHhcccCCC
Confidence 99999999999999877776644
No 215
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.79 E-value=1.2e-08 Score=90.55 Aligned_cols=91 Identities=13% Similarity=0.098 Sum_probs=67.1
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC----C--c----hHHHHHhCCC-------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG----D--H----KEFAKQKLQL------------- 393 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~----~--~----~~l~~~~~~V------------- 393 (430)
.++++||.||++||++|+...|.++++++++++.++.++.|+++. . + .+++ +++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHH-HHcCCCCeeeeeeccCCh
Confidence 468999999999999999999999999999987569999998863 1 0 2233 33322
Q ss_pred -----------------------CCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 394 -----------------------VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 -----------------------~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
..+|++++++..+++...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECT-TSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCC-CCCHHHHHHHHHHh
Confidence 225888888654444455655 57788888888775
No 216
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.79 E-value=1.5e-08 Score=91.15 Aligned_cols=92 Identities=13% Similarity=0.269 Sum_probs=72.6
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| ++||++|+...|.+.++++++++.++.|+.|++|.. +.+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM- 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH-
Confidence 4689999999 999999999999999999999765799999988741 14678
Q ss_pred HhCCCC------CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQLV------SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~------~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.| ...+.++|.+.|+++
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 889999 99999999655543333322 125678999888765
No 217
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.78 E-value=8.7e-08 Score=87.85 Aligned_cols=106 Identities=9% Similarity=0.161 Sum_probs=86.7
Q ss_pred CCceEcccchHHHHHHhcCCC-CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC--CchHHHHHhCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNRE-DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG--DHKEFAKQKLQLV 394 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~-k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~--~~~~l~~~~~~V~ 394 (430)
+.|.++|.+|+..+.. .+ ..+++.|+.+||+.|..+.+.|+++|+.+++ ++.|+.+|++. + ..++ +.|++.
T Consensus 113 plv~e~t~~n~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~-~i~F~~vd~~~~~~-~~~l-~~fgl~ 186 (227)
T 4f9z_D 113 HMVTEYNPVTVIGLFN---SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQG-KILFILVDSGMKEN-GKVI-SFFKLK 186 (227)
T ss_dssp CSEEECCHHHHHHHHH---SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTT-TCEEEEEETTSGGG-HHHH-HHTTCC
T ss_pred CceeecCcccHHHHhc---cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhC-CEEEEEeCCccHhH-HHHH-HHcCCC
Confidence 4699999999999875 44 3455667789999999999999999999998 79999999974 5 6788 899998
Q ss_pred --CCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 395 --SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 --~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.+|+++++.........+..+..+.+.|.+|++.+
T Consensus 187 ~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 187 ESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp GGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 89999999865532344433368999999999875
No 218
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.78 E-value=1.7e-08 Score=92.27 Aligned_cols=92 Identities=11% Similarity=0.245 Sum_probs=72.0
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| ++||++|+...|.|.++++++++.++.|+.|+++.. +..++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~- 133 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQIS- 133 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHH-
Confidence 3589999999 999999999999999999999755699999987631 14678
Q ss_pred HhCCCC------CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQLV------SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~------~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.+ ...+.+++.+.|+++
T Consensus 134 ~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 134 RDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 899999 99999999654433332222 135788998888765
No 219
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.77 E-value=1.1e-08 Score=91.18 Aligned_cols=92 Identities=14% Similarity=0.246 Sum_probs=71.6
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| ++||++|+...|.+.++++++++.++.++.|+++.. +.+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA- 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH-
Confidence 4689999999 999999999999999999999755699999988631 14678
Q ss_pred HhCCCC-----CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQLV-----SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~-----~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.| ...+.+++.+.|+++
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 899999 89999999654443333333 124688888888765
No 220
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.76 E-value=1.3e-08 Score=89.83 Aligned_cols=45 Identities=18% Similarity=0.135 Sum_probs=41.4
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG 381 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~ 381 (430)
.++++||+||++||++|+...|.+++++++|++.++.++.|+++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 578999999999999999999999999999988679999998764
No 221
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.75 E-value=2.3e-08 Score=90.92 Aligned_cols=92 Identities=12% Similarity=0.214 Sum_probs=71.9
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| ++||++|+...|.|.+++++|++.++.++.|++|.. +.+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS- 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH-
Confidence 4689999999 999999999999999999999755799999987641 14678
Q ss_pred HhCCCC-----CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQLV-----SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~-----~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.+ ..++.+++.+.|+++
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 899999 89999999755543333322 125688999888765
No 222
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.73 E-value=3.5e-08 Score=90.29 Aligned_cols=92 Identities=13% Similarity=0.275 Sum_probs=71.6
Q ss_pred CCCcEEEEEeC-CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLYA-PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+||+ +||++|+...|.+.+++++|++.++.|+.|++|.. +..++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS- 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH-
Confidence 47899999997 99999999999999999999876799999988741 13577
Q ss_pred HhCCCC------CCCEEEEEeCCCcceeecCCC---CCCHHHHHHHHHHh
Q 042284 389 QKLQLV------SFPTILFFPKHSAKPVKYPSE---KRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~------~~Ptl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.+. ....+++.+.|+++
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 889998 899999997555433333221 24578888888764
No 223
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=98.73 E-value=2.7e-08 Score=99.50 Aligned_cols=144 Identities=11% Similarity=0.101 Sum_probs=92.6
Q ss_pred cEEEEechhHHHHHH-HHHHhcCCCcEEEEecCC-CCCHHHHHHHHHHHHHh-----CCcEEEEccCchHHHHHHHhcCC
Q 042284 75 DIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTG-RLNPETHQFFDTVEKHY-----GIRIEYTFPNAVEVQALVRTKGL 147 (430)
Q Consensus 75 ~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg-~~fpet~~~~~~~~~~~-----gl~i~~~~p~~~~~~~~~~~~g~ 147 (430)
+++|++|||+||+++ +++.+.+.++.++|+|++ +..++..+.+.++++.+ |++++++.-... ..... .. .
T Consensus 189 kvlvalSGGvDS~vll~ll~~~G~~v~av~v~~~~~~~~~~~~~v~~~a~~l~~~~ggi~~~vv~~~~~-~~~i~-~~-~ 265 (413)
T 2c5s_A 189 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEV-QKTIN-KE-I 265 (413)
T ss_dssp EEEEECCSSSHHHHHHHHHHHBTEEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHH-HHHHH-HH-S
T ss_pred eEEEEeCCCChHHHHHHHHHHcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEECcHH-HHHHH-hc-C
Confidence 599999999999776 788888878888999986 34466777888888888 898877743221 11211 11 1
Q ss_pred CCCCccchhhhhhhhch---HHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEecccccc
Q 042284 148 FSFYEDGHQECCRIRKV---RPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVK 222 (430)
Q Consensus 148 ~~~~~~~~~~cc~~~K~---~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt 222 (430)
+ ...-|..+|. ..+.+..+ +++++++|...+|-. ............. .+...++||+.++
T Consensus 266 ~------~~~~c~~~Rr~~~~~~~~~A~~~g~~~I~tG~~~dD~a-e~~l~~l~~~~~~--------~~~~virPL~~l~ 330 (413)
T 2c5s_A 266 P------SSYSMTVMRRMMMRITERIAEERNALAITTGESLGQVA-SQTLDSMHTINEV--------TNYPVIRPLITMD 330 (413)
T ss_dssp C------GGGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTT-SCCHHHHHHHGGG--------CCSCEECTTTTCC
T ss_pred C------cccHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhH-HHHHHHHhccccc--------CCCEEEeccCCCC
Confidence 1 1112333333 22333333 567899999988853 1111111111110 1244689999999
Q ss_pred hHHHHHHHHHcCCC
Q 042284 223 GQDIWNFLRAMNIP 236 (430)
Q Consensus 223 ~~dVw~yi~~~~lp 236 (430)
+.||..|.++.|++
T Consensus 331 K~eI~~~a~~~Gl~ 344 (413)
T 2c5s_A 331 KLEIIKIAEEIGTY 344 (413)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999999984
No 224
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.72 E-value=6.3e-08 Score=83.55 Aligned_cols=92 Identities=10% Similarity=0.126 Sum_probs=70.3
Q ss_pred CCCcEEEEEeC-CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--------------------chHHHHHhCCCCC
Q 042284 337 REDPWLIVLYA-PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--------------------HKEFAKQKLQLVS 395 (430)
Q Consensus 337 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--------------------~~~l~~~~~~V~~ 395 (430)
.+++++|.||+ +||++|....|.+.++.+++++.++.++.|.+|.. +..++ +.|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 112 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALC-RAFDVIK 112 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHH-HHTTCEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHH-HHhCCcc
Confidence 46799999998 99999999999999999999875789999988632 14567 7889887
Q ss_pred ------------CCEEEEEeCCCcceeecCCC--CCCHHHHHHHHHHh
Q 042284 396 ------------FPTILFFPKHSAKPVKYPSE--KRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ------------~Ptl~~~~~g~~~~~~~~gg--~~~~~~l~~~i~~~ 429 (430)
+|++++++..+.+...+.+. ....+++.+.|+++
T Consensus 113 ~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 113 EKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 99999997655433334331 23467788887765
No 225
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.69 E-value=1e-07 Score=82.62 Aligned_cols=90 Identities=16% Similarity=0.192 Sum_probs=68.9
Q ss_pred CCCcEEEEEeCCC-CHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC----------------------CchHHHHHhCCC
Q 042284 337 REDPWLIVLYAPW-CHFCQAMEGSYIELAEQLEGMGVKVGKFRADG----------------------DHKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fya~w-C~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~----------------------~~~~l~~~~~~V 393 (430)
.+++++|.||++| |++|+...|.++++++++ . ++.++.|+.|. .+.++. +.|+|
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG-EAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH-HHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH-HHhCC
Confidence 4689999999999 999999999999999999 4 69999998763 114677 78999
Q ss_pred CC------CCEEEEEeCCCcceeecCC----CCCCHHHHHHHHHHh
Q 042284 394 VS------FPTILFFPKHSAKPVKYPS----EKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~------~Ptl~~~~~g~~~~~~~~g----g~~~~~~l~~~i~~~ 429 (430)
.. +|++++++..+.+...+.| ...+.+++.+.|+++
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 87 4999999755543444432 123568888888775
No 226
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.66 E-value=6.6e-08 Score=84.64 Aligned_cols=82 Identities=16% Similarity=0.212 Sum_probs=63.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC------------------------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD------------------------------------ 380 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~------------------------------------ 380 (430)
..+++|+.|+.+||++|+.+.|.++++.+++++ +.+...+..
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 467899999999999999999999999988764 666655531
Q ss_pred ---------------------------------CCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHH
Q 042284 381 ---------------------------------GDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427 (430)
Q Consensus 381 ---------------------------------~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~ 427 (430)
.+ ..++ ++++|.++||+++ +|+ .+.| ..+.+.|.+.|+
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~-~~~a-~~~gv~gtPt~~i--~g~----~~~G-~~~~~~l~~~i~ 169 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQS-MALA-QKLGFNGTPSFVV--EDA----LVPG-FVEQSQLQDAVD 169 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHH-HHHH-HHHTCCSSSEEEE--TTE----EECS-CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHH-HHHH-HHcCCccCCEEEE--CCE----EeeC-CCCHHHHHHHHH
Confidence 12 3456 7889999999987 553 3345 688999999987
Q ss_pred Hh
Q 042284 428 AL 429 (430)
Q Consensus 428 ~~ 429 (430)
+.
T Consensus 170 ~~ 171 (175)
T 3gyk_A 170 RA 171 (175)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 227
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=98.65 E-value=2.4e-08 Score=99.89 Aligned_cols=160 Identities=16% Similarity=0.165 Sum_probs=96.6
Q ss_pred CcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCC-cEEEEccCchHHHH----HHHhcCC
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGI-RIEYTFPNAVEVQA----LVRTKGL 147 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl-~i~~~~p~~~~~~~----~~~~~g~ 147 (430)
++++|+||||+||+++ +++.+.+.++.++++|.|..-.+-.++++++++++|+ ++.++.-. ..+.+ .+.....
T Consensus 11 ~KVvVA~SGGlDSSvll~~L~e~G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~~-eef~~~v~p~i~~na~ 89 (455)
T 1k92_A 11 QRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCR-KQLVAEGIAAIQCGAF 89 (455)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECH-HHHHHHHHHHHHHTCC
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeCh-HHHHHHhHHHHHcCCc
Confidence 5699999999999776 7777778888999999996433457889999999999 77776442 11221 1222111
Q ss_pred C--------CCCccchhhhhhhhchHHHHHHHh--cCceEEEeeec--cCCcccccCCCeeeecCCCCcccCCCCCeEEE
Q 042284 148 F--------SFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRK--DQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKW 215 (430)
Q Consensus 148 ~--------~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~--~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~ 215 (430)
. .......|.|. ..-+.++.+ +++.+++|... ++- .|-........ ++.-.+
T Consensus 90 y~~eg~rcY~l~t~~aRp~i----~~~l~e~A~e~Gad~IAtGht~kgnDq--~rf~~~~~al~----------p~l~vi 153 (455)
T 1k92_A 90 HNTTGGLTYFNTTPLGRAVT----GTMLVAAMKEDGVNIWGDGSTYKGNDI--ERFYRYGLLTN----------AELQIY 153 (455)
T ss_dssp CCEETTEECCCHHHHHHHHH----HHHHHHHHHHTTCCEEECCCCTTSSHH--HHHHHHHHHHC----------TTCEEE
T ss_pred ccccCceecccCCcchHHHH----HHHHHHHHHHcCCCEEEECCcCCCCCH--HHHHHHHHhcC----------CCCEEE
Confidence 0 00000011111 112223332 67899999852 221 22111110111 245578
Q ss_pred ecccc-------cchHHHHHHHHHcCCCCccccccCCcccCC
Q 042284 216 NPLAN-------VKGQDIWNFLRAMNIPINSLHSQGYISIGC 250 (430)
Q Consensus 216 ~Pi~d-------Wt~~dVw~yi~~~~lp~~pLY~~Gy~siGC 250 (430)
.|+.+ ++.+||..|.+++|||+..--+.-|.+--|
T Consensus 154 aPlr~~~ll~~~lsK~EI~~yA~~~GIp~~~t~~~pyS~d~n 195 (455)
T 1k92_A 154 KPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSN 195 (455)
T ss_dssp CGGGCHHHHHHSSSHHHHHHHHHHTTCCCCCCCCCSSEEEEE
T ss_pred CeeccccccccCCCHHHHHHHHHHcCCCcccCCCCCCccCCc
Confidence 99988 699999999999999997433444554433
No 228
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.62 E-value=5.1e-08 Score=88.76 Aligned_cols=81 Identities=12% Similarity=0.291 Sum_probs=60.4
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc-------------------------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA------------------------------------- 379 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~------------------------------------- 379 (430)
.++++|+.||++||++|+.+.|.++++.+. ++.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 160 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP 160 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCCh
Confidence 467899999999999999999999998752 355544432
Q ss_pred -------CCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 380 -------DGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 380 -------~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+++ .+++ ++++|.++||+ +|.+|. . +.| ..+.++|.++|++.
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gtPt~-v~~dG~--~--~~G-~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 161 ASCDVDIADH-YALG-VQLGVSGTPAV-VLSNGT--L--VPG-YQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCSCCHHHH-HHHH-HHHTCCSSSEE-ECTTSC--E--EES-CCCHHHHHHHHHHH
T ss_pred hHHHHHHHHH-HHHH-HHcCCCccCEE-EEcCCe--E--ecC-CCCHHHHHHHHHHh
Confidence 112 5677 89999999998 555664 2 234 57889999998764
No 229
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.60 E-value=1.7e-07 Score=84.14 Aligned_cols=90 Identities=11% Similarity=0.007 Sum_probs=60.3
Q ss_pred CCCcEEEEEeCCCCHh-HHHHHHHHHHHHHHHcC---CCeEEEEEEcCCC---------------------------chH
Q 042284 337 REDPWLIVLYAPWCHF-CQAMEGSYIELAEQLEG---MGVKVGKFRADGD---------------------------HKE 385 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~-C~~~~p~~~~la~~~~~---~~v~~~~Vd~~~~---------------------------~~~ 385 (430)
.++++||+||++||++ |....|.+.++.+.+.. .++.++.|++|.. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4789999999999997 99999999998877752 2688888988731 024
Q ss_pred HHHHhCCCC-CCC---------------EEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 386 FAKQKLQLV-SFP---------------TILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 386 l~~~~~~V~-~~P---------------tl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
++ +.|+|. ..| ++++++..+.+...+.| ..+.+.+.+.|.+
T Consensus 120 ~~-~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g-~~~~~~~~~~i~~ 176 (200)
T 2b7k_A 120 AC-KKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGR-NYDEKTGVDKIVE 176 (200)
T ss_dssp HH-HHTTC--------------CTTTCCCEEEECTTSCEEEEECT-TCCTTHHHHHHHH
T ss_pred HH-HHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCC-CCCHHHHHHHHHH
Confidence 67 788887 444 66666544443444544 4555555555543
No 230
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=98.60 E-value=8.7e-08 Score=95.34 Aligned_cols=148 Identities=16% Similarity=0.214 Sum_probs=90.1
Q ss_pred CcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCc-EEEEccCchHHHH----HHHhcCC
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIR-IEYTFPNAVEVQA----LVRTKGL 147 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~-i~~~~p~~~~~~~----~~~~~g~ 147 (430)
++++|++|||+||+++ +++.+.+.++.++++|.|.. +-.++++++++++|++ ++++........+ .+.....
T Consensus 6 ~kVvvalSGGlDSsvll~lL~e~G~eV~av~vd~g~~--~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~a~ 83 (413)
T 2nz2_A 6 GSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQK--EDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQSSAL 83 (413)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHTTEEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCC
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEECCcH--HHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHHhCcc
Confidence 4699999999999776 77777777788899999964 4478999999999997 6665432111111 1111111
Q ss_pred CCCCccchhhhhhhhch-----HHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEeccc-
Q 042284 148 FSFYEDGHQECCRIRKV-----RPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLA- 219 (430)
Q Consensus 148 ~~~~~~~~~~cc~~~K~-----~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~- 219 (430)
+. ...-|....- .-+.+..+ +.+++++|.........|..+...... ++.-.+.|+.
T Consensus 84 ---~e--~~y~~g~~~aRp~i~~~l~~~A~~~Ga~~IatGh~~~~nDq~rf~lg~~~l~----------p~l~ii~Pl~d 148 (413)
T 2nz2_A 84 ---YE--DRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLA----------PQIKVIAPWRM 148 (413)
T ss_dssp ---BT--TTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGGC
T ss_pred ---cc--cccccccccchHHHHHHHHHHHHHcCCCEEEECCcCcccchHHHHHHHHhcC----------CCCceeccccc
Confidence 00 0011111111 12223332 678999999873221123111100011 2456789999
Q ss_pred -----cc-chHHHHHHHHHcCCCCc
Q 042284 220 -----NV-KGQDIWNFLRAMNIPIN 238 (430)
Q Consensus 220 -----dW-t~~dVw~yi~~~~lp~~ 238 (430)
+| +.+||..|.+++|||+.
T Consensus 149 ~~~ll~~~sK~EI~~yA~~~Gip~~ 173 (413)
T 2nz2_A 149 PEFYNRFKGRNDLMEYAKQHGIPIP 173 (413)
T ss_dssp HHHHTTCC-CHHHHHHHHHTTCCCC
T ss_pred hhhhccCCCHHHHHHHHHHcCCCee
Confidence 89 99999999999999986
No 231
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.59 E-value=1.3e-07 Score=82.26 Aligned_cols=92 Identities=15% Similarity=0.304 Sum_probs=67.1
Q ss_pred CCCcEEEEEeCCCCH-hHHHHHHHHHHHHHHHcCC--CeEEEEEEcCC---C------------------------chHH
Q 042284 337 REDPWLIVLYAPWCH-FCQAMEGSYIELAEQLEGM--GVKVGKFRADG---D------------------------HKEF 386 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~-~C~~~~p~~~~la~~~~~~--~v~~~~Vd~~~---~------------------------~~~l 386 (430)
.++++||+||++||+ +|+...|.+.++.+.+++. ++.|+.|+++. . +.++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 478999999999999 9999999999999998763 39999999872 1 0111
Q ss_pred HHHh----------------CCCCCCCEEEEEeCCCcceeecCCCC-CCHHHHHHHHHHh
Q 042284 387 AKQK----------------LQLVSFPTILFFPKHSAKPVKYPSEK-RDVDSLMAFVNAL 429 (430)
Q Consensus 387 ~~~~----------------~~V~~~Ptl~~~~~g~~~~~~~~gg~-~~~~~l~~~i~~~ 429 (430)
. +. +++..+|++++++..+.+...+.|.. .+.++|.+.|+++
T Consensus 112 ~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 I-EEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp H-HHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHH
T ss_pred H-HHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHH
Confidence 1 11 34667899888866554444455521 2588999998876
No 232
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.58 E-value=1e-07 Score=86.42 Aligned_cols=82 Identities=15% Similarity=0.234 Sum_probs=61.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC------------------------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD------------------------------------ 380 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~------------------------------------ 380 (430)
..+++|+.|+++||++|+.+.|.++++.+. ++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~ 160 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE 160 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence 467899999999999999999999987652 2554433221
Q ss_pred --------CCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHhC
Q 042284 381 --------GDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNALR 430 (430)
Q Consensus 381 --------~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~~ 430 (430)
++ .+++ ++++|+++||+++ .+|+ .+.| ..+.++|.++|++.+
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gTPt~vi-~nG~----~~~G-~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 161 VKTPNIVKKH-YELG-IQFGVRGTPSIVT-STGE----LIGG-YLKPADLLRALEETA 210 (211)
T ss_dssp CCCSSHHHHH-HHHH-HHHTCCSSCEEEC-TTSC----CCCS-CCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHH-HHHH-HHcCCCcCCEEEE-eCCE----EecC-CCCHHHHHHHHHhcc
Confidence 12 4667 7899999999987 6775 2344 678999999998753
No 233
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.56 E-value=9.6e-08 Score=83.77 Aligned_cols=72 Identities=14% Similarity=0.165 Sum_probs=56.8
Q ss_pred CCCcEEEEEeCCC-CHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------chHHHHHhCCCC
Q 042284 337 REDPWLIVLYAPW-CHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------HKEFAKQKLQLV 394 (430)
Q Consensus 337 ~~k~vlV~Fya~w-C~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------~~~l~~~~~~V~ 394 (430)
.++++||+||++| |++|+...|.+.+++++ . ++.|+.|+.|.. +..++ +.|+|.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFG-EDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHH-HHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHH-HHhCCc
Confidence 4689999999999 99999999999999988 3 589999988721 14677 899998
Q ss_pred CC---------CEEEEEeCCCcceeec
Q 042284 395 SF---------PTILFFPKHSAKPVKY 412 (430)
Q Consensus 395 ~~---------Ptl~~~~~g~~~~~~~ 412 (430)
.. |++++++..+++...+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred ccccccCCcccceEEEECCCCeEEEEE
Confidence 87 8888886544433334
No 234
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.52 E-value=3.3e-07 Score=81.74 Aligned_cols=43 Identities=16% Similarity=0.202 Sum_probs=39.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD 380 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~ 380 (430)
.++++|+.||++||++|+.+.|.++++.+.+++ ++.|..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 578899999999999999999999999999987 7889988875
No 235
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.51 E-value=2.6e-07 Score=68.61 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=53.7
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHH---hCCCCCCCEEEEEeCCCcceeecCCCCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQ---KLQLVSFPTILFFPKHSAKPVKYPSEKRD 418 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~---~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~ 418 (430)
++.|+++||++|+.+.+.++++ ++.+..+|++.+ +++. + ++++.++|++++ +|+ . ..| .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~~~-~~~~-~~~~~~~~~~vP~l~~--~g~--~--~~g--~~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDISLD-DEAR-DYVMALGYVQAPVVEV--DGE--H--WSG--FR 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHH-HHHHHTTCBCCCEEEE--TTE--E--EES--CC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECCCC-HHHH-HHHHHcCCCccCEEEE--CCe--E--EcC--CC
Confidence 5679999999999999988764 367888999987 6665 5 799999999873 554 2 223 57
Q ss_pred HHHHHHHHH
Q 042284 419 VDSLMAFVN 427 (430)
Q Consensus 419 ~~~l~~~i~ 427 (430)
.++|.++|+
T Consensus 66 ~~~l~~~l~ 74 (75)
T 1r7h_A 66 PERIKQLQA 74 (75)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888888874
No 236
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.51 E-value=1.6e-07 Score=70.97 Aligned_cols=71 Identities=14% Similarity=0.174 Sum_probs=52.9
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHH--HhCCCCCCCEEEEEeCCCcceeecCCCCCCH
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK--QKLQLVSFPTILFFPKHSAKPVKYPSEKRDV 419 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~--~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~ 419 (430)
++.|+++||++|+.+.+.+++. ++.|..+|++++ +++.. .++++.++|+++ .+|+ .+ .| .+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~~~-~~~~~~~~~~g~~~vP~~~--~~g~--~~--~g--~~~ 66 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------GFDFEMINVDRV-PEAAEALRAQGFRQLPVVI--AGDL--SW--SG--FRP 66 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHHHHHHHTTCCSSCEEE--ETTE--EE--ES--CCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHHHhCCCccCEEE--ECCE--EE--ec--CCH
Confidence 5779999999999999988763 367888999987 66551 258999999983 4665 22 23 567
Q ss_pred HHHHHHHHH
Q 042284 420 DSLMAFVNA 428 (430)
Q Consensus 420 ~~l~~~i~~ 428 (430)
++|.++|++
T Consensus 67 ~~l~~~l~~ 75 (81)
T 1h75_A 67 DMINRLHPA 75 (81)
T ss_dssp HHHGGGSCC
T ss_pred HHHHHHHhc
Confidence 888877754
No 237
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.49 E-value=5.3e-07 Score=77.45 Aligned_cols=66 Identities=15% Similarity=0.166 Sum_probs=52.7
Q ss_pred CCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--------------------chHHHHHhCCCCCC
Q 042284 338 EDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--------------------HKEFAKQKLQLVSF 396 (430)
Q Consensus 338 ~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--------------------~~~l~~~~~~V~~~ 396 (430)
++++||+|| ++||++|....|.|.++.+++++.+ .++.|++|.. +..++ +.|++...
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~ 112 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFI-GLLGAKKT 112 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHH-HHHTCBSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHH-HHhCCccc
Confidence 347889987 9999999999999999999998756 7888876531 14677 78999999
Q ss_pred C-------EEEEEeCCC
Q 042284 397 P-------TILFFPKHS 406 (430)
Q Consensus 397 P-------tl~~~~~g~ 406 (430)
| ++++ ++|+
T Consensus 113 p~~g~~~~~~li-~~G~ 128 (159)
T 2a4v_A 113 PLSGSIRSHFIF-VDGK 128 (159)
T ss_dssp SSSCBCCEEEEE-ETTE
T ss_pred ccCCccceEEEE-cCCE
Confidence 8 5555 7776
No 238
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.49 E-value=3.1e-07 Score=83.93 Aligned_cols=92 Identities=10% Similarity=0.239 Sum_probs=69.4
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| ++||++|....|.|.+++++|++.++.++.|++|.. +..++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS- 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH-
Confidence 4689999999 999999999999999999999755688888877541 02456
Q ss_pred HhCCC-----CCCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQL-----VSFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V-----~~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|+| ..+|++++++..+.+...+.+ ...+.+++.+.|+++
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 67888 368999999765543333322 135788999888765
No 239
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.48 E-value=7.1e-07 Score=78.53 Aligned_cols=92 Identities=8% Similarity=0.042 Sum_probs=68.5
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--------------------chHHHHHhCCCCC
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--------------------HKEFAKQKLQLVS 395 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--------------------~~~l~~~~~~V~~ 395 (430)
.++++||.|| +.||++|....|.|.++.+++++.++.++.|.+|.. +..++ +.|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~-~~~gv~~ 128 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILC-KAFDVIK 128 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHH-HHTTCEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHH-HHcCCcc
Confidence 4678889998 999999999999999999999876789998887642 14566 7888853
Q ss_pred ------------CCEEEEEeCCCcceeecCC--CCCCHHHHHHHHHHh
Q 042284 396 ------------FPTILFFPKHSAKPVKYPS--EKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ------------~Ptl~~~~~g~~~~~~~~g--g~~~~~~l~~~i~~~ 429 (430)
.|++++++..+++...+.+ .....+++.+.|+++
T Consensus 129 ~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 129 EKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 6889999755543333332 124567777777765
No 240
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=98.48 E-value=8.4e-07 Score=91.82 Aligned_cols=167 Identities=13% Similarity=0.209 Sum_probs=98.0
Q ss_pred CCcEEEEechhHHHHHH-HHHHhc-CCCcEEEEecCCCCC-HHHHHHHHHHHHHh-CCcEEEEccCchHHHHHHHhcCCC
Q 042284 73 GNDIAIAFSGAEDVVLI-EYAKLT-GRPFRVFSLDTGRLN-PETHQFFDTVEKHY-GIRIEYTFPNAVEVQALVRTKGLF 148 (430)
Q Consensus 73 ~~~i~vs~SGGKDS~vl-~l~~~~-~~~i~vi~~DTg~~f-pet~~~~~~~~~~~-gl~i~~~~p~~~~~~~~~~~~g~~ 148 (430)
+++++|++|||.||+|+ .|+.+. +.++..+|+|+|... .|..+.++.+++.+ |++++++.-... +.. ...|..
T Consensus 255 ~~~vvvalSGGvDSsv~a~ll~~~~G~~v~~v~vd~g~~~~~e~~~~~~~~~~~l~gi~~~~vd~~~~-f~~--~l~g~~ 331 (556)
T 3uow_A 255 DHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFPDMNITKIDASEN-FLS--NLQGVT 331 (556)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHHHHCTTSEEEEEECHHH-HHH--HTTTCC
T ss_pred CceEEEEcccCCCHHHHHHHHHHHhCCeEEEEEEecCCCChHHHHHHHHHHHHhcCCCCeEEeccHHH-HHH--hhcCCC
Confidence 35799999999999776 666664 778899999999764 57777778899999 999988754321 221 112221
Q ss_pred CCCccchhhhhhhhchHHHHHHHhc---C---ceEEEeeeccCCcccccCC---CeeeecCCCCcccCCCCCeEEEeccc
Q 042284 149 SFYEDGHQECCRIRKVRPLKRALKG---L---RAWITGQRKDQSPGTRAEI---PVVQIDTSFEGIDGGKGSLVKWNPLA 219 (430)
Q Consensus 149 ~~~~~~~~~cc~~~K~~pl~~~~~~---~---~~~i~G~R~~Es~~~R~~~---~~~~~d~~~~~~~~~~~~~~~~~Pi~ 219 (430)
. +.. .+..|....+.-+.+.... . +.+++|+..+|-...+... ..+.......+.. .......+.||.
T Consensus 332 ~-pe~-kr~iig~~f~~vf~~~A~~~~~~~~~~~la~Gt~y~D~ies~~~~g~~~~iks~~n~~gl~-~~~~~~li~PL~ 408 (556)
T 3uow_A 332 D-PEQ-KRKIIGKLFIEEFEKAVNNIDIDINKTFLLQGTLYPDIIESKCSKNLSDTIKTHHNVGGLP-KNLKFKLFEPFK 408 (556)
T ss_dssp C-HHH-HHHHHHHHHHHHHHHHHHTTCCCGGGEEEECCCCHHHHHHHSCC--------------------CCCEEECTTT
T ss_pred C-hHH-HHHHHHHHHHHHHHHHHHHcCCcccccccccCccChHHHhhcccccccceecccccccccc-cccccceEeecc
Confidence 0 111 1112222333444444442 2 5777887554421111110 0000000000000 011345789999
Q ss_pred ccchHHHHHHHHHcCCCCccccccCC
Q 042284 220 NVKGQDIWNFLRAMNIPINSLHSQGY 245 (430)
Q Consensus 220 dWt~~dVw~yi~~~~lp~~pLY~~Gy 245 (430)
++++.||..|.++.|||+.-.+++-|
T Consensus 409 ~l~K~EVr~la~~lGlp~~~~~r~P~ 434 (556)
T 3uow_A 409 YLFKDDVKTLSRELNLPEEITNRHPF 434 (556)
T ss_dssp TCCHHHHHHHHHTTTCCHHHHHCCCC
T ss_pred cCcHHHHHHHHHHcCCCHHHhCCCCC
Confidence 99999999999999999877777633
No 241
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.46 E-value=6.2e-07 Score=81.51 Aligned_cols=43 Identities=23% Similarity=0.274 Sum_probs=39.2
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD 380 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~ 380 (430)
.+|+|||+|||+||++|+ ..|.|+++.++|++.++.++.|+++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 578999999999999999 8999999999998767999999876
No 242
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.45 E-value=3.3e-07 Score=85.16 Aligned_cols=92 Identities=18% Similarity=0.214 Sum_probs=69.7
Q ss_pred CCCc-EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--------------------------chHHHHH
Q 042284 337 REDP-WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--------------------------HKEFAKQ 389 (430)
Q Consensus 337 ~~k~-vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--------------------------~~~l~~~ 389 (430)
.++. ||++|+++||++|....+.|.+++++++..++.++.|++|.. +..++ +
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia-~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA-R 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH-H
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH-H
Confidence 3564 566889999999999999999999999865799999988642 14577 7
Q ss_pred hCCCC-------CCCEEEEEeCCCcceeecCCC---CCCHHHHHHHHHHh
Q 042284 390 KLQLV-------SFPTILFFPKHSAKPVKYPSE---KRDVDSLMAFVNAL 429 (430)
Q Consensus 390 ~~~V~-------~~Ptl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~ 429 (430)
.|+|. .+|++++++..+.+.....+. .++.++|...|+++
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 88987 899999997555432222221 26899999998875
No 243
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.44 E-value=2.2e-06 Score=70.70 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=78.9
Q ss_pred CceEcc-cchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCC
Q 042284 319 KLVSFR-RTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFP 397 (430)
Q Consensus 319 ~v~~lt-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~P 397 (430)
.+..|+ .+++++++. .+++++|-|+++||++| .+.|.++|+.+ + .+.|+.++ + ++++ +++++. .|
T Consensus 22 ~~~~i~s~~e~e~fi~---~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~---~-~~v~-~~~~v~-~~ 87 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIA---ATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIST---D-SEVL-THYNIT-GN 87 (124)
T ss_dssp CCEECCSHHHHHHHHH---TSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEEC---C-HHHH-HHTTCC-SS
T ss_pred cceEcCCHHHHHHHHh---cCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEC---h-HHHH-HHcCCC-CC
Confidence 455564 477888876 78899999999999998 66899999999 4 69998874 3 6889 899998 89
Q ss_pred EEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 398 TILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 398 tl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
++++|++.......|.| +..+.++|.+||..-
T Consensus 88 ~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 88 TICLFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp CEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred eEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 99999987655677775 358999999999753
No 244
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.42 E-value=9.2e-07 Score=80.08 Aligned_cols=92 Identities=12% Similarity=0.224 Sum_probs=69.6
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| ++||++|....|.|.++.++++..++.++.|++|.. +..++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 125 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 125 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH-
Confidence 4689999999 999999999999999999999766799998877532 13456
Q ss_pred HhCCCC------CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQLV------SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~------~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.+ ...+.+++.+.|+++
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 678884 69999999765543333322 125788898888765
No 245
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.41 E-value=8e-07 Score=78.74 Aligned_cols=92 Identities=13% Similarity=0.167 Sum_probs=68.2
Q ss_pred CCCcEEEEEeC-CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC------------------------chHHHHHhC
Q 042284 337 REDPWLIVLYA-PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD------------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~------------------------~~~l~~~~~ 391 (430)
.++++||.||+ +||++|....|.|.++.+++++.++.++.|..+.. +..++ +.|
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~-~~y 107 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALT-RNF 107 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHH-HHT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHH-HHh
Confidence 46899999995 99999999999999999998765789998877532 02455 667
Q ss_pred CCC------CCCEEEEEeCCCcceeecCCC---CCCHHHHHHHHHHh
Q 042284 392 QLV------SFPTILFFPKHSAKPVKYPSE---KRDVDSLMAFVNAL 429 (430)
Q Consensus 392 ~V~------~~Ptl~~~~~g~~~~~~~~gg---~~~~~~l~~~i~~~ 429 (430)
+|. .+|++++++..+.+...+.+. ..+.++|.+.|+++
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 776 379999997555433333331 24688898888765
No 246
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.40 E-value=1.1e-06 Score=79.39 Aligned_cols=43 Identities=19% Similarity=0.146 Sum_probs=38.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD 380 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~ 380 (430)
.+++|||+|||+||++| ...|.|+++.++|++.++.++.|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 57899999999999999 67899999999998767999999875
No 247
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.40 E-value=5e-07 Score=80.32 Aligned_cols=42 Identities=21% Similarity=0.314 Sum_probs=37.2
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA 379 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~ 379 (430)
.++++|+.|+++||++|+.+.|.+.++.+.+.+ ++.|..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 467899999999999999999999999999887 788876655
No 248
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.39 E-value=2.7e-07 Score=79.46 Aligned_cols=93 Identities=14% Similarity=0.297 Sum_probs=62.6
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--------------------chHHHHHhCCCC-
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--------------------HKEFAKQKLQLV- 394 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--------------------~~~l~~~~~~V~- 394 (430)
.+|+++|.|| ++||++|....|.+.++.++++..++.++.|+.|.. +.+++ ++|+|.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~-~~ygv~~ 107 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVV-KKYNVAW 107 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH-HHTTCEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHH-HHcCCcc
Confidence 4788999999 999999999999999998888776788888887642 13566 677763
Q ss_pred ----------CCCEEEEEeCCCcceeec----CCCCCCHHHHHHHHHHhC
Q 042284 395 ----------SFPTILFFPKHSAKPVKY----PSEKRDVDSLMAFVNALR 430 (430)
Q Consensus 395 ----------~~Ptl~~~~~g~~~~~~~----~gg~~~~~~l~~~i~~~~ 430 (430)
..|++++++..+.+...+ ..+..+.+++.+.|++|.
T Consensus 108 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~Ls 157 (157)
T 4g2e_A 108 EFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS 157 (157)
T ss_dssp ECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHTC
T ss_pred ccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHhC
Confidence 467888886544322222 123457899999998863
No 249
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.37 E-value=6.7e-07 Score=82.76 Aligned_cols=85 Identities=14% Similarity=0.279 Sum_probs=63.0
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC------------------------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD------------------------------------ 380 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~------------------------------------ 380 (430)
..+.+|+.|+.+||++|+.+.+.++++.+. + ++.|..++.-
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 356789999999999999999999887664 3 5777665441
Q ss_pred --------------CCchHHHHHhCCCCCCCEEEEEeC-CCcceeecCCCCCCHHHHHHHHHHh
Q 042284 381 --------------GDHKEFAKQKLQLVSFPTILFFPK-HSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 381 --------------~~~~~l~~~~~~V~~~Ptl~~~~~-g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++ ..++ ++++|.++||+++.+. |+ .....| ..+.++|.++|++.
T Consensus 173 ~~~~~~~~~~~~v~~~-~~l~-~~~gv~gtPt~vi~~~~G~--~~~~~G-~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 173 VPANVSTEQMKVLSDN-EKLM-DDLGANVTPAIYYMSKENT--LQQAVG-LPDQKTLNIIMGNK 231 (241)
T ss_dssp CCSSCCHHHHHHHHHH-HHHH-HHHTCCSSCEEEEEETTTE--EEEEES-SCCHHHHHHHTTC-
T ss_pred ccccCCHHHHHHHHHH-HHHH-HHcCCCCCCEEEEECCCCC--EEEecC-CCCHHHHHHHHHHH
Confidence 11 3456 7899999999999863 43 334445 68899999988754
No 250
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=98.34 E-value=1.3e-06 Score=86.41 Aligned_cols=152 Identities=13% Similarity=0.206 Sum_probs=89.7
Q ss_pred HHcCCcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCC-cEEEEccCchHHHH-----HH
Q 042284 70 QKFGNDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGI-RIEYTFPNAVEVQA-----LV 142 (430)
Q Consensus 70 ~~~~~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl-~i~~~~p~~~~~~~-----~~ 142 (430)
...+.+++|+||||-||+++ .++.+.+.++..+++|.|.. +-++.++++++++|+ +++++.-.. .+.+ .+
T Consensus 11 ~~~~~KVVVA~SGGlDSSv~a~~Lke~G~eViavt~d~Gq~--~Ele~A~~vA~~lGi~~~~VvDl~e-ef~~~v~~p~i 87 (421)
T 1vl2_A 11 HHMKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK--DDFVAIKEKALKTGASKVYVEDLRR-EFVTDYIFTAL 87 (421)
T ss_dssp ---CCEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECHH-HHHHHTHHHHH
T ss_pred ccccCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEEEcCCH--HHHHHHHHHHHHcCCceEEEEecHH-HHHHhhhhHHH
Confidence 44567899999999999766 77777788888999999964 346789999999999 777764321 1221 11
Q ss_pred HhcCCC-C-CC--ccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEe
Q 042284 143 RTKGLF-S-FY--EDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWN 216 (430)
Q Consensus 143 ~~~g~~-~-~~--~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~ 216 (430)
...... . .+ ....+.|+ ..-+.++.+ +++++++|.........|-...+...+ +..--+.
T Consensus 88 ~~na~yeg~Y~~g~~l~Rp~i----~~~l~~~A~~~Gad~IA~G~~~kgnDq~rf~~~~~al~----------p~~~Iia 153 (421)
T 1vl2_A 88 LGNAMYEGRYLLGTAIARPLI----AKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALN----------PNLKVIS 153 (421)
T ss_dssp TTTCCBTTTBCCHHHHHHHHH----HHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTSEEEC
T ss_pred hcCCcccCceeCCCcccHHHH----HHHHHHHHHHcCCCEEEECCeeCCCChHHHHHHHHhcC----------CCCeEEc
Confidence 111110 0 00 00022222 122223332 778999998763111012111110111 2345678
Q ss_pred cccc-------cchHHHHHHHHHcCCCCc
Q 042284 217 PLAN-------VKGQDIWNFLRAMNIPIN 238 (430)
Q Consensus 217 Pi~d-------Wt~~dVw~yi~~~~lp~~ 238 (430)
|+.+ ++++||.+|.+++|||+.
T Consensus 154 Pl~d~~~l~~~lsK~Eir~~A~e~Glp~~ 182 (421)
T 1vl2_A 154 PWKDPEFLAKFKGRTDLINYAMEKGIPIK 182 (421)
T ss_dssp GGGCHHHHHHTC--CHHHHHHHHHTCCCC
T ss_pred ccCchhhccccCCHHHHHHHHHHcCCCcc
Confidence 9999 599999999999999985
No 251
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.33 E-value=2e-06 Score=74.89 Aligned_cols=92 Identities=9% Similarity=0.112 Sum_probs=67.7
Q ss_pred CCCcEEEEEeCCCCH-hHHHHHHHHHHHHHHHcC--CCeEEEEEEcCC--C----------------------------c
Q 042284 337 REDPWLIVLYAPWCH-FCQAMEGSYIELAEQLEG--MGVKVGKFRADG--D----------------------------H 383 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~-~C~~~~p~~~~la~~~~~--~~v~~~~Vd~~~--~----------------------------~ 383 (430)
.++++||+||++||+ .|....|.++++.++++. .++.++.|.+|. . .
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 478999999999997 699999999999999963 368888887651 0 0
Q ss_pred hHHHHHhCC---------CCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQ---------LVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~---------V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
..++ +.|+ +...|++++++..+++...+.|...+.++|.+.|+++
T Consensus 107 ~~~~-~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLL-DAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHH-HHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHH-HHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 2345 5544 3456888888765544434555457899999999875
No 252
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.32 E-value=1.5e-06 Score=85.57 Aligned_cols=140 Identities=15% Similarity=0.170 Sum_probs=107.1
Q ss_pred cccccCCCC-----CcccccchhhhccCCCccccccCCCCCCCCCC------CCCCceEcc-cchHHHHHHhcCCCCcEE
Q 042284 275 AKECGLHNG-----NIKQEELSQHININGNGVAQHTNGSAPASDLF------NSQKLVSFR-RTGIENLARLQNREDPWL 342 (430)
Q Consensus 275 ~~e~g~~~~-----~i~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~~v~~lt-~~~f~~~i~~~~~~k~vl 342 (430)
+..|.-+.. +|..+||-.+|..+.. ..+.|..++..+. ..+.|..++ .+++++++. ..++.++
T Consensus 74 ~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~~---~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~--~~~~~~v 148 (367)
T 3us3_A 74 LVDSEKDAAVAKKLGLTEEDSIYVFKEDEV---IEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFEN--IEDEIKL 148 (367)
T ss_dssp EEETTTTHHHHHHHTCCSTTEEEEEETTEE---EECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHH--CCSSCEE
T ss_pred EEeCcccHHHHHHcCCCcCceEEEEECCcE---EEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhc--cCCCcEE
Confidence 467765543 7889999998864333 3677877776653 235688885 478888874 2457899
Q ss_pred EEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHH
Q 042284 343 IVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSL 422 (430)
Q Consensus 343 V~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l 422 (430)
|.||++||. ...+.|.++|..+.+ .+.|+.++ + .+++ ++|+|.. |++++|+++......|.|+.++.++|
T Consensus 149 v~ff~~~~~---~~~~~f~~~A~~~~~-~~~F~~~~---~-~~~~-~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~~l 218 (367)
T 3us3_A 149 IGYFKNKDS---EHYKAFKEAAEEFHP-YIPFFATF---D-SKVA-KKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEEEI 218 (367)
T ss_dssp EEECSCTTC---HHHHHHHHHHHHHTT-TSCEEEEC---C-HHHH-HHHTCCT-TCEEEECTTCSSCEECSSSSCCHHHH
T ss_pred EEEECCCCc---hHHHHHHHHHHhhcC-CcEEEEEC---C-HHHH-HHcCCCC-CeEEEEcCCCCCCeecCCCCCCHHHH
Confidence 999999876 467789999999987 68888873 4 6889 8999985 99999998655578888755899999
Q ss_pred HHHHHHh
Q 042284 423 MAFVNAL 429 (430)
Q Consensus 423 ~~~i~~~ 429 (430)
.+||...
T Consensus 219 ~~fi~~~ 225 (367)
T 3us3_A 219 VNFVEEH 225 (367)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9999863
No 253
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.31 E-value=1.7e-06 Score=79.98 Aligned_cols=92 Identities=11% Similarity=0.238 Sum_probs=70.4
Q ss_pred CCCcEEEEEeC-CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLYA-PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+||+ +||++|....|.|.+++++|++.++.++.|.+|.. +.+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~- 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS- 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH-
Confidence 46899999999 99999999999999999999876799999887632 13566
Q ss_pred HhCCCC------CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQLV------SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~------~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|++. .+|++++++..+.+...+.+ ...+.+++.+.|+.+
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 788887 68999999755543222211 135788888888765
No 254
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.30 E-value=1.6e-06 Score=79.30 Aligned_cols=97 Identities=14% Similarity=0.173 Sum_probs=79.1
Q ss_pred CCceEc-ccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 318 QKLVSF-RRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~l-t~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
..+++| +.+++++++. .++.+||-|+++|| ..+.+.|.++|+.+. .+.|+.. .+ ++++ ++|+|.+
T Consensus 9 ~~~~~l~s~~~~~~~l~---~~~v~vVgff~~~~---~~~~~~f~~~A~~l~--~~~F~~t---~~-~~v~-~~~~v~~- 74 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIA---ATEVAVIGFFQDLE---IPAVPILHSMVQKFP--GVSFGIS---TD-SEVL-THYNITG- 74 (227)
T ss_dssp CCCEECCSHHHHHHHHH---TSSEEEEEECSCSC---STHHHHHHHHTTTCT--TSEEEEE---CC-HHHH-HHTTCCS-
T ss_pred CCCeeeCCHHHHHHHHh---cCCeEEEEEecCCC---chhHHHHHHHHHhCC--CceEEEE---CC-HHHH-HHcCCCC-
Confidence 346666 5589999886 78899999999985 578999999999994 5889874 35 7899 8999998
Q ss_pred CEEEEEeCCCcceeecCC---CCCCHHHHHHHHHH
Q 042284 397 PTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNA 428 (430)
Q Consensus 397 Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~ 428 (430)
|++++|+++......|.| |.++.+.|.+||+.
T Consensus 75 p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~ 109 (227)
T 4f9z_D 75 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 109 (227)
T ss_dssp SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHH
T ss_pred CeEEEEEecCcccccccccccCCCCHHHHHHHHHH
Confidence 999999986544677774 35899999999975
No 255
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=98.26 E-value=2.4e-06 Score=90.46 Aligned_cols=166 Identities=11% Similarity=0.115 Sum_probs=93.8
Q ss_pred CcEEEEechhHHHHHH-HHHHhc-C-CCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHHHHHh-----c
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLT-G-RPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRT-----K 145 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~-~-~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~-----~ 145 (430)
+++++++|||.||+|+ +|+.++ + .++..+|+|.|..-....+.++++++++|++++++.-.. .+...... .
T Consensus 241 ~~vvv~lSGGvDSsVla~Ll~~alG~~~V~aV~vd~g~~~~~e~e~a~~~a~~lGI~~~vvdi~~-~f~~~~~~l~~~~~ 319 (697)
T 2vxo_A 241 SKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAH-SFYNGTTTLPISDE 319 (697)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHSCGGGEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEECHH-HHHTCCCBCC----
T ss_pred cceEEEccCchHHHHHHHHHHHhcCCceEEEEEeccccCCcchHHHHHHHHHHhCCcEEEecchH-HHHhhhhhhccccc
Confidence 6799999999999776 677665 5 678899999997655557889999999999988774331 11110000 0
Q ss_pred CCC---CCCccchhhhhhhhchHH----HHHH----Hh--cCc----eEEEeeeccCCcccccC------CCeeeecCCC
Q 042284 146 GLF---SFYEDGHQECCRIRKVRP----LKRA----LK--GLR----AWITGQRKDQSPGTRAE------IPVVQIDTSF 202 (430)
Q Consensus 146 g~~---~~~~~~~~~cc~~~K~~p----l~~~----~~--~~~----~~i~G~R~~Es~~~R~~------~~~~~~d~~~ 202 (430)
+.- +........|-...|... +.+. .+ +.+ .+.+|..+++-. .... ...+......
T Consensus 320 ~~~Y~~g~~~~l~~v~~~~~kR~iig~~~~~v~~~~A~~~g~~~~~~~LatG~~~~D~i-Es~~~~l~~g~~~iks~~nv 398 (697)
T 2vxo_A 320 DRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLI-ESASLVASGKAELIKTHHND 398 (697)
T ss_dssp ------CBCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTCCCTTSEEEECCCSSCCSB-CCHHHHHHSCCCGGGSCCSS
T ss_pred ccchhcccCcCcccccCHHHHHhHHHHHHHHHHHHHHHHcCCCcccEEEEEeccChhhh-hhhhhhhhcCcccccccccc
Confidence 000 000001111212223321 2222 12 334 788998877642 1110 0000000000
Q ss_pred Cc---ccCCCCCeEEEecccccchHHHHHHHHHcCCCCcccccc
Q 042284 203 EG---IDGGKGSLVKWNPLANVKGQDIWNFLRAMNIPINSLHSQ 243 (430)
Q Consensus 203 ~~---~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp~~pLY~~ 243 (430)
.+ ..+ .+...+.||.++++.||++|.++.|||+.-.+..
T Consensus 399 ~g~~~~~~--~~~~~i~PL~~L~K~EVr~la~~lGlP~~i~~r~ 440 (697)
T 2vxo_A 399 TELIRKLR--EEGKVIEPLKDFHKDEVRILGRELGLPEELVSRH 440 (697)
T ss_dssp CHHHHHHH--HTTCEECGGGGSCHHHHHHHHHHTTCCHHHHTCC
T ss_pred chhhHHhc--cCCEEEEecccCCHHHHHHHHHHcCCCcceeeCC
Confidence 00 000 0124789999999999999999999998555444
No 256
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.26 E-value=4.2e-06 Score=72.13 Aligned_cols=90 Identities=11% Similarity=0.104 Sum_probs=65.1
Q ss_pred CCCcEEEEEeC-CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC----------------------chHHHHHhCCC
Q 042284 337 REDPWLIVLYA-PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD----------------------HKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~----------------------~~~l~~~~~~V 393 (430)
.+++++|+||+ .||++|....|.+.++.+++ . ++.++.|+.|.. +..++ +.|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFG-RDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHH-HHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHH-HHhCC
Confidence 46899999995 99999999999999998888 3 688888876532 13456 67777
Q ss_pred C----C--CCEEEEEeCCCcceeecCC----CCCCHHHHHHHHHHh
Q 042284 394 V----S--FPTILFFPKHSAKPVKYPS----EKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~----~--~Ptl~~~~~g~~~~~~~~g----g~~~~~~l~~~i~~~ 429 (430)
. + .|++++++..+.+...+.| ...+.+++.+.|+++
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred ccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 6 3 3999999755543344432 134568888888764
No 257
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.26 E-value=3.2e-07 Score=79.67 Aligned_cols=92 Identities=15% Similarity=0.283 Sum_probs=67.7
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--------------------chHHHHHhCCCC-
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--------------------HKEFAKQKLQLV- 394 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--------------------~~~l~~~~~~V~- 394 (430)
++|+++|.|| ++||++|....|.|.++.+++++.++.++.|+.|.. +.+++ +.|+|.
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~-~~ygv~~ 110 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVI-KLYNVYH 110 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH-HHTTCEE
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHH-HHcCCcc
Confidence 6889999998 999999999999999998888876789998887642 14567 788874
Q ss_pred ---------CCCEEEEEeCCCcceeecC----CCCCCHHHHHHHHHHh
Q 042284 395 ---------SFPTILFFPKHSAKPVKYP----SEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ---------~~Ptl~~~~~g~~~~~~~~----gg~~~~~~l~~~i~~~ 429 (430)
..|++++++..+.+...+. .+..+.+++.+.|+++
T Consensus 111 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 111 EDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp EEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred cccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 3688888865553322221 1234788888888765
No 258
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.23 E-value=3.1e-06 Score=82.60 Aligned_cols=190 Identities=13% Similarity=0.100 Sum_probs=123.7
Q ss_pred ccccchHHHHHHHHHcCCCCccccccCCcccCCcCCCCCCCCC-------CccccCCCc--CCCCCcccccCCCC-----
Q 042284 218 LANVKGQDIWNFLRAMNIPINSLHSQGYISIGCEPCTRPVLPG-------QHEREGRWW--WEDAKAKECGLHNG----- 283 (430)
Q Consensus 218 i~dWt~~dVw~yi~~~~lp~~pLY~~Gy~siGC~~Ct~~~~~~-------~~~r~grw~--~~~~~~~e~g~~~~----- 283 (430)
+...+.++....+..++ ..-.-|-.-.|- | +...|. ..+-+...- -..-.+..|.-+..
T Consensus 13 v~~l~~~~f~~~i~~~~-----~~lV~F~a~wC~-c-~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~ 85 (350)
T 1sji_A 13 VVSLTEKNFKQVLKKYD-----VLCLYYHESVSS-D-KVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKL 85 (350)
T ss_dssp CEEECHHHHHHHHTTCS-----EEEEEEECCSCS-S-STTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHH
T ss_pred cEECCHHHHHHHHhhCC-----eEEEEEECCCCc-c-hhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhc
Confidence 44556677766665433 122224466887 7 544332 110000000 00112355654432
Q ss_pred CcccccchhhhccCCCccccccCCCCCCCCCC------CCCCceEcc-cchHHHHHHhcCCCCcEEEEEeCCCCHhHHHH
Q 042284 284 NIKQEELSQHININGNGVAQHTNGSAPASDLF------NSQKLVSFR-RTGIENLARLQNREDPWLIVLYAPWCHFCQAM 356 (430)
Q Consensus 284 ~i~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~~v~~lt-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~ 356 (430)
++..+||-.+|..+.. ..+.|..+...+. ..+.+..++ .+++++++.. .++.++|.|+++||.. .
T Consensus 86 ~v~~~Pt~~~~~~g~~---~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~--~~~~~vv~ff~~~~~~---~ 157 (350)
T 1sji_A 86 GFDEEGSLYVLKGDRT---IEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERI--EDQIKLIGFFKSEESE---Y 157 (350)
T ss_dssp TCCSTTEEEEEETTEE---EEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHC--CSSCEEEEECSCTTSH---H
T ss_pred CCCccceEEEEECCcE---EEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhcc--CCCcEEEEEECCCCcH---H
Confidence 6889999888843332 4677776665542 235688885 5788887641 3457899999998755 4
Q ss_pred HHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 357 EGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 357 ~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
.+.|.++|+.+.+ .+.|+.+ .+ ++++ ++++|. +|++++|+++......|.|+.++.++|.+||++.
T Consensus 158 ~~~~~~~A~~~~~-~~~f~~~---~~-~~~~-~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~ 223 (350)
T 1sji_A 158 YKAFEEAAEHFQP-YIKFFAT---FD-KGVA-KKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEH 223 (350)
T ss_dssp HHHHHHHHHHTTT-TSEEEEE---CC-HHHH-HHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcc-CcEEEEE---CC-HHHH-HHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHc
Confidence 6789999999977 7889887 34 7899 899999 9999999885444778888448999999999863
No 259
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.19 E-value=9.1e-07 Score=70.41 Aligned_cols=58 Identities=16% Similarity=0.250 Sum_probs=42.6
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc------hHHHHHhCCCCCCCEEEEEeCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH------KEFAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~------~~l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
++.|+++||++|+.+.+.|+++...++ . +..+|++.+. ..+. +.+++.++|++ |.+|+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~--~--~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~i--~~~g~ 77 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG--L--LEFVDITATSDTNEIQDYLQ-QLTGARTVPRV--FIGKE 77 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT--S--EEEEEGGGSTTHHHHHHHHH-HHHSCCCSCEE--EETTE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC--c--cEEEEccCCCCHHHHHHHHH-HHhCCCCcCeE--EECCE
Confidence 566999999999999999988754443 2 4556666541 2467 78899999997 34665
No 260
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.17 E-value=6.6e-06 Score=75.81 Aligned_cols=90 Identities=13% Similarity=0.296 Sum_probs=64.9
Q ss_pred CCCcEEEEEe-CCCCHhHH-HHHHHHHHHHHHHcCCCe-EEEEEEcCCC---------------------chHHHHHhCC
Q 042284 337 REDPWLIVLY-APWCHFCQ-AMEGSYIELAEQLEGMGV-KVGKFRADGD---------------------HKEFAKQKLQ 392 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~-~~~p~~~~la~~~~~~~v-~~~~Vd~~~~---------------------~~~l~~~~~~ 392 (430)
.+++++|.|| ++||++|. ...|.|.++++++++.++ .++.|+.+.. +..++ +.|+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~g 110 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFT-EGMG 110 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHH-HHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHH-HHhC
Confidence 4688999999 99999999 899999999999876578 8998887632 13466 7888
Q ss_pred CC-----------CCCEEEEEeCCCcceeecCCC--C------CCHHHHHHHHHH
Q 042284 393 LV-----------SFPTILFFPKHSAKPVKYPSE--K------RDVDSLMAFVNA 428 (430)
Q Consensus 393 V~-----------~~Ptl~~~~~g~~~~~~~~gg--~------~~~~~l~~~i~~ 428 (430)
+. ..|+.+++++|+.. ..+.+. . .+.+++.+.|+.
T Consensus 111 v~~~~~~~g~~~~~~p~t~li~~G~i~-~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 111 MLVGKEDLGFGKRSWRYSMLVKNGVVE-KMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEEE-EEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred ceeecccccCcccceeEEEEEECCEEE-EEEEeccCCCccceecCHHHHHHHhhh
Confidence 75 34877777766632 222221 1 467888777653
No 261
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.15 E-value=1.6e-06 Score=70.35 Aligned_cols=60 Identities=15% Similarity=0.188 Sum_probs=44.2
Q ss_pred cEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc------hHHHHHhCCCCCCCEEEEEeCCC
Q 042284 340 PWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH------KEFAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 340 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~------~~l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
..++.|+++||++|+.+.+.|+++...+ + . |..+|++.+. ..+. +.+++.++|++++ +|+
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~-~--~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~v~i--~g~ 84 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKR-G-A--YEIVDIKEFKPENELRDYFE-QITGGKTVPRIFF--GKT 84 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCT-T-S--EEEEEGGGSSSHHHHHHHHH-HHHSCCSSCEEEE--TTE
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCc-C-c--eEEEEccCCCChHHHHHHHH-HHhCCCCcCEEEE--CCE
Confidence 4567799999999999999887653221 1 1 7778888761 2677 7899999998743 665
No 262
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.13 E-value=3.5e-06 Score=78.55 Aligned_cols=92 Identities=12% Similarity=0.224 Sum_probs=69.2
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++++||+|| +.||++|....|.|.+++++|++.++.++.|++|.. +..++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va- 168 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 168 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHH-
Confidence 4688999999 999999999999999999999876799999987642 13456
Q ss_pred HhCCCC------CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQLV------SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~------~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|+|. .+|++++++..+.+...+.+ ..++.+++.+.|+.+
T Consensus 169 ~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 169 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 677775 57999999765543222221 136788888888765
No 263
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.11 E-value=7.8e-06 Score=72.29 Aligned_cols=91 Identities=11% Similarity=0.184 Sum_probs=60.6
Q ss_pred CCCc-EEEEEeCCCCHhHHH-HHHHHHHHHHHHcCCCeE-EEEEEcCCC----------------------chHHHHHhC
Q 042284 337 REDP-WLIVLYAPWCHFCQA-MEGSYIELAEQLEGMGVK-VGKFRADGD----------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~-vlV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v~-~~~Vd~~~~----------------------~~~l~~~~~ 391 (430)
.+++ +|+.|+++||++|+. ..|.|+++++++++.++. ++.|+.+.. +.+++ ++|
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 133 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFT-KAI 133 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHH-HHc
Confidence 3554 555566999999999 799999999999876788 888887642 13466 778
Q ss_pred CCC-----------CCCEEEEEeCCCcceeecC--CCCCCHHHHHHHHHH
Q 042284 392 QLV-----------SFPTILFFPKHSAKPVKYP--SEKRDVDSLMAFVNA 428 (430)
Q Consensus 392 ~V~-----------~~Ptl~~~~~g~~~~~~~~--gg~~~~~~l~~~i~~ 428 (430)
+|. ..|+.+++++|+....... .+..+...+.+.|++
T Consensus 134 Gv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 134 GMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp TCEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred CCceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 875 3577777787663222221 123444555555554
No 264
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.11 E-value=8.9e-06 Score=70.30 Aligned_cols=89 Identities=16% Similarity=0.125 Sum_probs=63.8
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC----------------------chHHHHHhCCC
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD----------------------HKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~----------------------~~~l~~~~~~V 393 (430)
.+++++|.|| +.||++|....|.++++.++ . ++.++.|+.|.. +.+++ +.|++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 120 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFG-ENYGV 120 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHH-HHHTC
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHH-HHhCC
Confidence 4688999999 78999999999999998777 3 588888876532 13556 67777
Q ss_pred CC------CCEEEEEeCCCcceee-c---CCCCCCHHHHHHHHHHh
Q 042284 394 VS------FPTILFFPKHSAKPVK-Y---PSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 394 ~~------~Ptl~~~~~g~~~~~~-~---~gg~~~~~~l~~~i~~~ 429 (430)
.. .|++++++..+.+... + .....+.+++.+.|+++
T Consensus 121 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 121 VMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp EETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred ccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 65 8999999755543332 1 11235678888888764
No 265
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.09 E-value=4.9e-06 Score=71.93 Aligned_cols=73 Identities=10% Similarity=0.083 Sum_probs=55.1
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC----------------------chHHHHHhCCC
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD----------------------HKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~----------------------~~~l~~~~~~V 393 (430)
.++++||+|| +.||++|....|.+.++.+++ . ++.++.|+.|.. +..++ +.|++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 118 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S-NTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALH-SQLGV 118 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHH-HHTTC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHH-HHhCc
Confidence 4689999999 899999999999999999998 3 688888876421 14566 77887
Q ss_pred CC---------CCEEEEEeCCCcceeec
Q 042284 394 VS---------FPTILFFPKHSAKPVKY 412 (430)
Q Consensus 394 ~~---------~Ptl~~~~~g~~~~~~~ 412 (430)
.. .|++++++..+.+...+
T Consensus 119 ~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 119 DIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp EECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred eecccccCCccceeEEEEcCCCEEEEEE
Confidence 53 49999997555433333
No 266
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.07 E-value=2.5e-05 Score=71.26 Aligned_cols=89 Identities=18% Similarity=0.234 Sum_probs=65.8
Q ss_pred cEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC------------------------------chHHHHH
Q 042284 340 PWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD------------------------------HKEFAKQ 389 (430)
Q Consensus 340 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~------------------------------~~~l~~~ 389 (430)
.+|+.|+++||++|....+.+.+++++++..++.++.|.+|.. +.+++ +
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va-~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA-I 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH-H
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH-H
Confidence 5666678999999999999999999999876789988877632 13456 6
Q ss_pred hCCCC------------CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 390 KLQLV------------SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 390 ~~~V~------------~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
.|++. .+|++++++..+.+...+.+ ..++.++|.+.|+.+
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 77773 37999999765543333322 136889999988865
No 267
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.06 E-value=8.2e-06 Score=70.34 Aligned_cols=69 Identities=14% Similarity=0.188 Sum_probs=54.0
Q ss_pred CCCcEEEEEe-CCCCHhHH-HHHHHHHHHHHHHcCCCeE-EEEEEcCCC----------------------chHHHHHhC
Q 042284 337 REDPWLIVLY-APWCHFCQ-AMEGSYIELAEQLEGMGVK-VGKFRADGD----------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~-~~~p~~~~la~~~~~~~v~-~~~Vd~~~~----------------------~~~l~~~~~ 391 (430)
.+++++|.|| ++||++|. ...|.|.++++++++.++. ++.|+.+.. +.+++ +.|
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~ 112 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYT-HAL 112 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHH-HHc
Confidence 4688999999 89999999 8999999999998755677 887766531 13566 778
Q ss_pred CCC------C-----CCEEEEEeCCC
Q 042284 392 QLV------S-----FPTILFFPKHS 406 (430)
Q Consensus 392 ~V~------~-----~Ptl~~~~~g~ 406 (430)
++. + .|+++++++|+
T Consensus 113 gv~~~~~~~g~~~~~~p~~~vid~G~ 138 (162)
T 1tp9_A 113 GLELDLQEKGLGTRSRRFALLVDDLK 138 (162)
T ss_dssp TCEEEETTTTSEEEECCEEEEEETTE
T ss_pred CcccccccCCCCccceeEEEEEECCE
Confidence 876 2 79999998554
No 268
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.05 E-value=8.8e-06 Score=70.72 Aligned_cols=70 Identities=11% Similarity=0.129 Sum_probs=53.3
Q ss_pred CCCcEEEEEe-CCCCHhHHH-HHHHHHHHHHHHcCCCe-EEEEEEcCCC----------------------chHHHHHhC
Q 042284 337 REDPWLIVLY-APWCHFCQA-MEGSYIELAEQLEGMGV-KVGKFRADGD----------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~-~~p~~~~la~~~~~~~v-~~~~Vd~~~~----------------------~~~l~~~~~ 391 (430)
.+++++|.|| ++||++|.. ..|.|+++++++++.++ .++.|+.+.. +.+++ +.|
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~-~~~ 108 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFT-KAV 108 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHH-HHc
Confidence 4677888886 999999999 99999999999876578 8998876532 13456 677
Q ss_pred CCCCC-----------CEEEEEeCCCc
Q 042284 392 QLVSF-----------PTILFFPKHSA 407 (430)
Q Consensus 392 ~V~~~-----------Ptl~~~~~g~~ 407 (430)
++... |+.+++++|+.
T Consensus 109 gv~~~~~~~~g~~~~~p~t~lI~~G~I 135 (167)
T 2wfc_A 109 DMELDLSAVLGNVRSKRYSLVIEDGVV 135 (167)
T ss_dssp TCEECCHHHHSSCEECCEEEEEETTEE
T ss_pred CCccccccccCcccceEEEEEEeCCEE
Confidence 77643 87777766653
No 269
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.04 E-value=1.3e-05 Score=69.49 Aligned_cols=91 Identities=16% Similarity=0.221 Sum_probs=63.5
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc--hHHHH------------------HhCCCC-
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH--KEFAK------------------QKLQLV- 394 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~--~~l~~------------------~~~~V~- 394 (430)
.+++++|.|| ++||++|....|.+.++.+++ . ++.++.|..|..+ .++++ +.|++.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 123 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDMEKYGVLI 123 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGGGGGTCBB
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-CceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcHHHhCCEe
Confidence 4679999999 899999999999999999888 3 6899988876431 11220 234443
Q ss_pred --------CCCEEEEEeCCCcceeecCC----CCCCHHHHHHHHHHh
Q 042284 395 --------SFPTILFFPKHSAKPVKYPS----EKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 --------~~Ptl~~~~~g~~~~~~~~g----g~~~~~~l~~~i~~~ 429 (430)
..|++++++..+.+...+.+ ...+.+++.+.|+++
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 15899999755543333322 245678899888875
No 270
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=98.03 E-value=6.7e-06 Score=85.96 Aligned_cols=153 Identities=17% Similarity=0.174 Sum_probs=93.3
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHhc-C-CCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHH
Q 042284 63 EIMDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLT-G-RPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEV 138 (430)
Q Consensus 63 ~~i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~-~-~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~ 138 (430)
..|+..+++.+ ++++|++|||.||+|+ .|+.+. + .++..++++++...+++.+.++++++++|++++++.-.. .+
T Consensus 315 ~~l~~~~~~~g~~~vvvglSGGvDSsv~a~la~~alG~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~i~~-~~ 393 (590)
T 3n05_A 315 VGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEP-MF 393 (590)
T ss_dssp HHHHHHHHTTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSSCCHHHHHHHHHHHHHHTCEEEECCSHH-HH
T ss_pred HHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHHHHhCcccEEEEEECCCCCCHHHHHHHHHHHHHcCCcEEEEEChH-HH
Confidence 34555555544 5699999999999776 666664 6 678899999998889999999999999999987764332 23
Q ss_pred HHHHHhcCCCCCCccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEe
Q 042284 139 QALVRTKGLFSFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWN 216 (430)
Q Consensus 139 ~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~ 216 (430)
..+........+...+.. ...+..-+..... +..++.|| .++|.. . ... ..++ . ..--+.
T Consensus 394 ~~~~~~l~~~~~~~~n~~---ar~r~~~l~~~A~~~g~~vl~TG-n~se~~--~-Gy~-----t~~g----d--~~~~~~ 455 (590)
T 3n05_A 394 DAYMASLGLTGLAEENLQ---SRLRGTTLMAISNQEGHIVLAPG-NKSELA--V-GYS-----TLYG----D--SVGAYG 455 (590)
T ss_dssp HHHHHHHCCCTHHHHHHH---HHHHHHHHHHHHHHHTCEEBCCC-CHHHHH--H-TCC-----CSSC----T--TSCSBC
T ss_pred HHHHHHhcccchhhhHHH---HHHHHHHHHHHHHhcCCEEEeCC-CHHHHh--c-Cch-----hhcC----C--Ccccee
Confidence 333322211100000111 1112222333322 45577788 555532 1 111 1110 0 112468
Q ss_pred cccccchHHHHHHHHHcC
Q 042284 217 PLANVKGQDIWNFLRAMN 234 (430)
Q Consensus 217 Pi~dWt~~dVw~yi~~~~ 234 (430)
||.++++.+|+...+..|
T Consensus 456 Pl~~l~K~eVr~la~~lg 473 (590)
T 3n05_A 456 PIKDVYKTSIFRLAEWRN 473 (590)
T ss_dssp TTTTSCHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhC
Confidence 999999999999999876
No 271
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.02 E-value=2.7e-05 Score=71.54 Aligned_cols=91 Identities=15% Similarity=0.231 Sum_probs=67.2
Q ss_pred CCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC----------------------------chHHHH
Q 042284 338 EDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD----------------------------HKEFAK 388 (430)
Q Consensus 338 ~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~----------------------------~~~l~~ 388 (430)
++.+||+|| ++||+.|....+.|.+++++++..++.++.|.+|.. +.+++
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va- 107 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA- 107 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH-
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH-
Confidence 348888898 999999999999999999998765788888877532 13455
Q ss_pred HhCCCC------------CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 389 QKLQLV------------SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~------------~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+.|++. .+|++++++..+.+...+.+ ..++.++|.+.|+.+
T Consensus 108 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 108 VKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 677774 57999999765543333211 136889999988865
No 272
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.01 E-value=5.3e-05 Score=66.46 Aligned_cols=102 Identities=14% Similarity=0.062 Sum_probs=75.8
Q ss_pred cchHHHHHHhc-----CCCCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcCCCc-------------
Q 042284 325 RTGIENLARLQ-----NREDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRADGDH------------- 383 (430)
Q Consensus 325 ~~~f~~~i~~~-----~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~~~~------------- 383 (430)
...|++.++.+ ++.|.++|+++++||..|..+.... +++.+.++. ++.+...|++..+
T Consensus 37 ~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~e~~~~~~~~~~~~~ 115 (178)
T 2ec4_A 37 IGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKDSNRARFLTMCNRHF 115 (178)
T ss_dssp CSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSHHHHHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCchhhhhhhhhhhhhh
Confidence 46677777654 5689999999999999999998654 777777776 7999999998762
Q ss_pred -hHHHH--HhCCCCCCCEEEEEeCCC---cceeecCCCCCCHHHHHHHHHH
Q 042284 384 -KEFAK--QKLQLVSFPTILFFPKHS---AKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 384 -~~l~~--~~~~V~~~Ptl~~~~~g~---~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
..++. +.|++.++|+++++.... .+.....| ..++++|.+.|.+
T Consensus 116 g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G-~~~~~~ll~~L~~ 165 (178)
T 2ec4_A 116 GSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQG-NTTVDELMMRLMA 165 (178)
T ss_dssp CHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECS-CCCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeC-CCCHHHHHHHHHH
Confidence 12330 238999999999995432 12344555 7899998887754
No 273
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.00 E-value=2.1e-06 Score=76.87 Aligned_cols=44 Identities=20% Similarity=0.443 Sum_probs=40.6
Q ss_pred CCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcCCC
Q 042284 338 EDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRADGD 382 (430)
Q Consensus 338 ~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~~~ 382 (430)
.+++||.||+.||+||+.+.|.+ +++++.+++ ++.|.+++++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccCcC
Confidence 57899999999999999999999 999999987 799999999876
No 274
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.00 E-value=9.6e-06 Score=62.37 Aligned_cols=55 Identities=24% Similarity=0.363 Sum_probs=43.2
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC--CCchHHHHHhC-CCCCCCEEEEEeCCC
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD--GDHKEFAKQKL-QLVSFPTILFFPKHS 406 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~--~~~~~l~~~~~-~V~~~Ptl~~~~~g~ 406 (430)
-++.|+++||++|+.+.+.+++. ++.|..+|++ .. +++. +.+ ++.++|+++ .+|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv~~~~~-~~l~-~~~~~~~~vP~l~--~~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK-------GVKYTDIDASTSLR-QEMV-QRANGRNTFPQIF--IGDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH-------TCCEEEECSCHHHH-HHHH-HHHHSSCCSCEEE--ETTE
T ss_pred eEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCHHHH-HHHH-HHhCCCCCcCEEE--ECCE
Confidence 36779999999999999988875 2567778887 34 6777 788 999999984 3665
No 275
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=97.98 E-value=1.5e-05 Score=74.92 Aligned_cols=156 Identities=12% Similarity=0.149 Sum_probs=87.5
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHhc-----------CCCcEEEEecCCCCCHHHHHHHHHHHHHhCC-cE
Q 042284 63 EIMDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLT-----------GRPFRVFSLDTGRLNPETHQFFDTVEKHYGI-RI 128 (430)
Q Consensus 63 ~~i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~-----------~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl-~i 128 (430)
+.|+..+++.+ ++++|++|||.||+++ .|+.++ +..+..++++.|. .+..+.++++++.+|+ +.
T Consensus 29 ~~L~d~l~~~g~~~vvvglSGGvDSal~a~l~~~A~~~Lg~~~~~~~~~v~av~~p~~~--~~~~~~A~~~a~~lgi~~~ 106 (279)
T 3q4g_A 29 AFIKRKLTEARYKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGE--QKDEDEAQLALSFIRPTHS 106 (279)
T ss_dssp HHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEECCSSS--CSCHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHHcCCCCEEEEccCCHHHHHHHHHHHHHHHHhCcccccCCceEEEEEecCCC--hHHHHHHHHHHHHhCCCeE
Confidence 45555566655 6699999999999876 554432 2356667777653 3446889999999999 66
Q ss_pred EEEccCchHHHH-------HHHhcCCCCCCccchhhh--hh---hhchHHHHHHHhcCceEEEee-eccCCcccccCCCe
Q 042284 129 EYTFPNAVEVQA-------LVRTKGLFSFYEDGHQEC--CR---IRKVRPLKRALKGLRAWITGQ-RKDQSPGTRAEIPV 195 (430)
Q Consensus 129 ~~~~p~~~~~~~-------~~~~~g~~~~~~~~~~~c--c~---~~K~~pl~~~~~~~~~~i~G~-R~~Es~~~R~~~~~ 195 (430)
+++.-.. .+.. .+...+.... ......| |+ ..+..-+..........+.|+ .++|..
T Consensus 107 ~~i~i~~-~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~NiqaR~R~~~Ly~~A~~~g~lVlgTgn~sE~~-------- 176 (279)
T 3q4g_A 107 VSVNIKA-GVDGLHAASHHALANTGLIPS-DPAKVDFIKGNVKARARMVAQYEIAGYVGGLVLGTDHSAENI-------- 176 (279)
T ss_dssp EECCCHH-HHHHHHHHHHHHHHHHTCSCS-SCCCHHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCCCHHHHH--------
T ss_pred EEEECHH-HHHHHHHHHHHHhhhhccccc-CCCcccchhhhHHHHHHHHHHHHHHHHCCCEEecCccHHhhh--------
Confidence 6653221 1222 2222221100 1111112 23 233344444444444566664 333321
Q ss_pred eeecCCCCcccCCCCCeEEEecccccchHHHHHHHHHcCCC
Q 042284 196 VQIDTSFEGIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 196 ~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp 236 (430)
..+-..|+ + +.--++||.+.++.+|++..+..|+|
T Consensus 177 ~Gy~TkyG----D--~~~di~Pl~dl~Kt~Vr~LA~~lgiP 211 (279)
T 3q4g_A 177 TGFYTKFG----D--GACDLAPLFGLNKRQVRLLAKTLGAP 211 (279)
T ss_dssp HTCSCTTT----T--TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred ccchhhcC----C--cccceeecCCCcHHHHHHHHHHhCCc
Confidence 11111111 1 12358999999999999999999875
No 276
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.97 E-value=8.3e-05 Score=63.12 Aligned_cols=106 Identities=12% Similarity=0.168 Sum_probs=78.7
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeC-CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc--CCCchHHHHHhCCCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYA-PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA--DGDHKEFAKQKLQLV 394 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~--~~~~~~l~~~~~~V~ 394 (430)
+.|.++|.+|+..+.. ...++.++++. ..-..-..+.+.+.++|+.+++ ++.|+.+|. +.+ ..+. +.|++.
T Consensus 14 PLV~e~t~en~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg-ki~Fv~vd~~~~~~-~~~l-~~fGl~ 87 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFG---GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFAFIDSDHTDN-QRIL-EFFGLK 87 (147)
T ss_dssp -CEEECCTTTHHHHHS---SSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT-TCEEEEECTTCGGG-HHHH-HHTTCC
T ss_pred CeeEEeccccHHHHhc---CCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC-ceEEEEEecchHhH-HHHH-HHcCCC
Confidence 5699999999988764 55555554444 3334466788999999999998 899999998 555 5678 899998
Q ss_pred C--CCEEEEEeC-CCcceeecCCCCCCHHHHHHHHHHh
Q 042284 395 S--FPTILFFPK-HSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~--~Ptl~~~~~-g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
. +|+++++.. +......+..+..+.+.|.+|++.+
T Consensus 88 ~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~ 125 (147)
T 3bj5_A 88 KEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRF 125 (147)
T ss_dssp GGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHH
Confidence 6 999999975 3321233333478999999999865
No 277
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.95 E-value=1.4e-05 Score=70.91 Aligned_cols=42 Identities=10% Similarity=0.275 Sum_probs=36.4
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA 379 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~ 379 (430)
..+++|+.|+.+||++|+.+.|.+.++.+.++. ++.|..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 467899999999999999999999999999876 677776654
No 278
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.95 E-value=2e-05 Score=68.93 Aligned_cols=91 Identities=12% Similarity=0.148 Sum_probs=59.8
Q ss_pred CCCcEEEEE-eCCCCHhHH-HHHHHHHHHHHHHcCCCeEEEE-EEcCCC----------------------chHHHHHhC
Q 042284 337 REDPWLIVL-YAPWCHFCQ-AMEGSYIELAEQLEGMGVKVGK-FRADGD----------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~F-ya~wC~~C~-~~~p~~~~la~~~~~~~v~~~~-Vd~~~~----------------------~~~l~~~~~ 391 (430)
.+++++|.| +++||++|. ...|.|.+++++++..++.++. |..|.. +.+++ +.|
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 120 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFG-KET 120 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHH-HHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHH-HHh
Confidence 356555555 599999999 4899999999999876677775 766531 13566 777
Q ss_pred CCC-------------CCCEEEEEeCCCcceeecCC--CCCCHHHHHHHHHH
Q 042284 392 QLV-------------SFPTILFFPKHSAKPVKYPS--EKRDVDSLMAFVNA 428 (430)
Q Consensus 392 ~V~-------------~~Ptl~~~~~g~~~~~~~~g--g~~~~~~l~~~i~~ 428 (430)
+|. ..|+.+++++|+........ ..++..+..+.|++
T Consensus 121 Gv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~~ 172 (173)
T 3mng_A 121 DLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQ 172 (173)
T ss_dssp TCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHHH
T ss_pred CCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHHh
Confidence 775 35999999855532222211 12566666666654
No 279
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=97.94 E-value=2.4e-05 Score=73.63 Aligned_cols=158 Identities=13% Similarity=0.061 Sum_probs=83.8
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHhc-------CC--CcEEEEecCCCCCHHHHHHHHHHHHHhC-CcEEE
Q 042284 63 EIMDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLT-------GR--PFRVFSLDTGRLNPETHQFFDTVEKHYG-IRIEY 130 (430)
Q Consensus 63 ~~i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~-------~~--~i~vi~~DTg~~fpet~~~~~~~~~~~g-l~i~~ 130 (430)
..|+..+++.+ ++++|++|||.||+++ .|+.++ +. .+..+.... ..++..+-++++++.+| +++++
T Consensus 35 ~~L~d~l~~~g~~~vvvglSGGiDSal~a~La~~A~daLG~~~~~~~viav~~p~--~~~~~~~dA~~~a~~lg~i~~~~ 112 (285)
T 3dpi_A 35 GFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPY--GAQHDEADARRALAFVRADETLT 112 (285)
T ss_dssp HHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCS--CC---CHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHcCCCcEEEEccCChhHHHHHHHHHHHHHHhcccCcccEEEEEEcCC--CCHHHHHHHHHHHHHcCCCcEEE
Confidence 45555556655 6699999999999876 454432 22 233444443 34556677889999998 67766
Q ss_pred EccCc--hHHHHHHHhcCCCCCCc--cchhhhh--hhhchHHHHHHHhcCceEEEee-eccCCcccccCCCeeeecCCCC
Q 042284 131 TFPNA--VEVQALVRTKGLFSFYE--DGHQECC--RIRKVRPLKRALKGLRAWITGQ-RKDQSPGTRAEIPVVQIDTSFE 203 (430)
Q Consensus 131 ~~p~~--~~~~~~~~~~g~~~~~~--~~~~~cc--~~~K~~pl~~~~~~~~~~i~G~-R~~Es~~~R~~~~~~~~d~~~~ 203 (430)
+.-.. ..+...+...|...-.. .+...|. ...+..-+..........+.|+ .++|.. ...-..|+
T Consensus 113 i~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~NiqaR~Rm~~L~~~A~~~g~lVlgTgn~sE~~--------~Gy~T~~G 184 (285)
T 3dpi_A 113 VDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAESV--------MGFFTKFG 184 (285)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHH--------HHHHHCCC
T ss_pred EEChHHHHHHHHHHHhcCccccccCCCchhhhhHHHHHHHHHHHHHHHHCCCEEEeCccHHhhh--------CCcccccC
Confidence 53221 22222333333321000 1111221 2234444444444455566665 223310 11111111
Q ss_pred cccCCCCCeEEEecccccchHHHHHHHHHcCCC
Q 042284 204 GIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 204 ~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp 236 (430)
+ +..-++||.++++.||+...+..|+|
T Consensus 185 ----D--~~~~~~Pl~~l~K~eV~~la~~lg~p 211 (285)
T 3dpi_A 185 ----D--GGADVLPLAGLTKRRVRALARMLGAD 211 (285)
T ss_dssp ----C--CCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred ----C--CceeEeeecCCcHHHHHHHHHHcCCC
Confidence 0 12257999999999999999999875
No 280
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.93 E-value=1.5e-05 Score=71.43 Aligned_cols=68 Identities=13% Similarity=0.164 Sum_probs=53.3
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC----------------------chHHHHHhCCC
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD----------------------HKEFAKQKLQL 393 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~----------------------~~~l~~~~~~V 393 (430)
.+++++|.|| +.||++|....|.++++.+++ . ++.++.|..|.. +..++ +.|+|
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~-~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~-~~ygv 153 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E-NTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFK-QAYGV 153 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHH-HHTTC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C-CCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHH-HHhCc
Confidence 4689999999 789999999999999999999 3 688888876532 13556 67777
Q ss_pred C---------CCCEEEEEeCCCc
Q 042284 394 V---------SFPTILFFPKHSA 407 (430)
Q Consensus 394 ~---------~~Ptl~~~~~g~~ 407 (430)
. ..|++++++..+.
T Consensus 154 ~~~~~~~~g~~~p~~~lID~~G~ 176 (200)
T 3zrd_A 154 AITEGPLAGLTARAVVVLDGQDN 176 (200)
T ss_dssp EECSSTTTTSBCCEEEEECTTSB
T ss_pred eeecccCCCccccEEEEECCCCe
Confidence 5 2699999965544
No 281
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.93 E-value=3.2e-05 Score=60.14 Aligned_cols=73 Identities=15% Similarity=0.306 Sum_probs=53.0
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHh-----CCCCCCCEEEEEeCCCcceeecCCC
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQK-----LQLVSFPTILFFPKHSAKPVKYPSE 415 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~-----~~V~~~Ptl~~~~~g~~~~~~~~gg 415 (430)
-|+.|.++||++|+..+..|++. ++.|-.+|++++ ++.. +. .+.+++|+++ +.+|. ... +
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-------gi~y~~idi~~d-~~~~-~~~~~~~~G~~tVP~I~-i~Dg~--~l~--~- 69 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-------RIAYDEVDIEHN-RAAA-EFVGSVNGGNRTVPTVK-FADGS--TLT--N- 69 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-------TCCCEEEETTTC-HHHH-HHHHHHSSSSSCSCEEE-ETTSC--EEE--S-
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-------CCceEEEEcCCC-HHHH-HHHHHHcCCCCEeCEEE-EeCCE--EEe--C-
Confidence 35669999999999999877652 478889999987 5543 22 2678899875 45665 222 2
Q ss_pred CCCHHHHHHHHHHh
Q 042284 416 KRDVDSLMAFVNAL 429 (430)
Q Consensus 416 ~~~~~~l~~~i~~~ 429 (430)
.+.++|.++|.++
T Consensus 70 -~~~~el~~~L~el 82 (92)
T 2lqo_A 70 -PSADEVKAKLVKI 82 (92)
T ss_dssp -CCHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHh
Confidence 5788899888765
No 282
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=97.93 E-value=2.3e-05 Score=73.62 Aligned_cols=154 Identities=14% Similarity=0.130 Sum_probs=85.1
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHhcC---------CCcEEEEecCCCCCHHHHHHHHHHHHHhCC-cEE
Q 042284 62 LEIMDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLTG---------RPFRVFSLDTGRLNPETHQFFDTVEKHYGI-RIE 129 (430)
Q Consensus 62 ~~~i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~~---------~~i~vi~~DTg~~fpet~~~~~~~~~~~gl-~i~ 129 (430)
...|+..+++.+ .+++|++|||.||+++ .|+.++. ..+..++++.|.. ...+.++++++++|+ +++
T Consensus 26 ~~~L~d~v~~~g~~~vvvgLSGGvDSsv~a~La~~a~~~lg~~~~~~~v~av~~~~~~~--~d~~~A~~va~~lgi~~~~ 103 (271)
T 1kqp_A 26 VNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQ--QDEDDAQLALKFIKPDKSW 103 (271)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSC--TTHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEeCCCCC--CCHHHHHHHHHhcCCCeEE
Confidence 345555565544 5699999999999776 5665543 2566677776543 347889999999998 776
Q ss_pred EEccCc--hHHHHHHHh-cCCCCCCccchhhhhhh---hchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCC
Q 042284 130 YTFPNA--VEVQALVRT-KGLFSFYEDGHQECCRI---RKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTS 201 (430)
Q Consensus 130 ~~~p~~--~~~~~~~~~-~g~~~~~~~~~~~cc~~---~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~ 201 (430)
++.-.. ..+...+.. .|.+. .+... |++ .+...+..... +..++-|| ..+|.. .... ..
T Consensus 104 ~i~i~~~~~~~~~~l~~~~~~~~---~~~~~-~N~~aR~r~~~l~~~A~~~g~lvl~tg-n~~E~~---~Gy~-----t~ 170 (271)
T 1kqp_A 104 KFDIKSTVSAFSDQYQQETGDQL---TDFNK-GNVKARTRMIAQYAIGGQEGLLVLGTD-HAAEAV---TGFF-----TK 170 (271)
T ss_dssp ECCCHHHHHHHHHHHHHHHSCCC---CHHHH-HHHHHHHHHHHHHHHHHHHTCEEBCCC-CHHHHT---TTCS-----CT
T ss_pred EeccHHHHHHHHHHHhhhcCCCC---cchhh-hhHHHHHHHHHHHHHHHHCCCEEEECc-cHHHhc---cCCc-----cc
Confidence 553221 112222221 13221 11111 222 22333333332 32233333 334421 1111 11
Q ss_pred CCcccCCCCCeEEEecccccchHHHHHHHHHcCCC
Q 042284 202 FEGIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 202 ~~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp 236 (430)
++ . ..--+.||.++++.||+...+..|+|
T Consensus 171 ~g----d--~~~~~~Pl~~l~K~eVr~la~~lglp 199 (271)
T 1kqp_A 171 YG----D--GGADLLPLTGLTKRQGRTLLKELGAP 199 (271)
T ss_dssp TT----T--TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred cc----c--ccccccccccCCHHHHHHHHHHcCCC
Confidence 11 0 12247899999999999999999997
No 283
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.92 E-value=1.3e-05 Score=66.68 Aligned_cols=67 Identities=12% Similarity=0.170 Sum_probs=46.6
Q ss_pred cchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--ch----HHHHHhCCCCCCCE
Q 042284 325 RTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--HK----EFAKQKLQLVSFPT 398 (430)
Q Consensus 325 ~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--~~----~l~~~~~~V~~~Pt 398 (430)
.+.+++++. .. .++| |+++||++|+.+.+.|+++. +.|..+|++.. .+ .+. +.+++.++|+
T Consensus 17 ~~~~~~~i~---~~-~vvv-f~~~~Cp~C~~~~~~L~~~~-------i~~~~vdid~~~~~~~~~~~l~-~~~g~~~vP~ 83 (130)
T 2cq9_A 17 VNQIQETIS---DN-CVVI-FSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPR 83 (130)
T ss_dssp HHHHHHHHH---HS-SEEE-EECSSCSHHHHHHHHHHHHT-------CCCEEEETTTSTTHHHHHHHHH-HHHSSCCSSE
T ss_pred HHHHHHHHc---CC-cEEE-EEcCCChHHHHHHHHHHHcC-------CCcEEEECcCCcCcHHHHHHHH-HHhCCCCcCE
Confidence 345566554 33 4444 99999999999999998762 34556676654 12 377 7889999999
Q ss_pred EEEEeCCC
Q 042284 399 ILFFPKHS 406 (430)
Q Consensus 399 l~~~~~g~ 406 (430)
++ .+|+
T Consensus 84 l~--i~G~ 89 (130)
T 2cq9_A 84 IF--VNGT 89 (130)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 84 3665
No 284
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.91 E-value=1.9e-05 Score=62.95 Aligned_cols=65 Identities=15% Similarity=0.306 Sum_probs=47.1
Q ss_pred chHHHHHHhcCCCCcEEEEEeC-----CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchH----HHHHhCCCCCC
Q 042284 326 TGIENLARLQNREDPWLIVLYA-----PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE----FAKQKLQLVSF 396 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~----l~~~~~~V~~~ 396 (430)
+.+++++. .+ .|+| |++ +||++|+.+.+.|+++ ++.|..+|++.+ +. +. +.+++.++
T Consensus 8 ~~~~~~i~---~~-~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~~-~~~~~~l~-~~~g~~~v 73 (105)
T 2yan_A 8 ERLKVLTN---KA-SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLK-AYSNWPTY 73 (105)
T ss_dssp HHHHHHHT---SS-SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGGC-HHHHHHHH-HHHTCCSS
T ss_pred HHHHHHhc---cC-CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHH-HHHCCCCC
Confidence 34555543 33 4555 776 9999999999998776 267888999887 55 34 45789999
Q ss_pred CEEEEEeCCC
Q 042284 397 PTILFFPKHS 406 (430)
Q Consensus 397 Ptl~~~~~g~ 406 (430)
|++ |.+|+
T Consensus 74 P~v--~i~g~ 81 (105)
T 2yan_A 74 PQL--YVKGE 81 (105)
T ss_dssp CEE--EETTE
T ss_pred CeE--EECCE
Confidence 998 34665
No 285
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.89 E-value=5.8e-06 Score=67.52 Aligned_cols=69 Identities=14% Similarity=0.270 Sum_probs=48.8
Q ss_pred chHHHHHHhcCCCCcEEEEEeCCCCHhHHHH-HHHHHHHHHHHcCCCeEEEEEEcCCCc------hHHHHHhCCCCCCCE
Q 042284 326 TGIENLARLQNREDPWLIVLYAPWCHFCQAM-EGSYIELAEQLEGMGVKVGKFRADGDH------KEFAKQKLQLVSFPT 398 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~Vd~~~~~------~~l~~~~~~V~~~Pt 398 (430)
+.+++++. .. . ++.|+++||++|+.+ ++.++++.. . .+.|..+|++.+. .++. +.+++.++|+
T Consensus 16 ~~~~~~i~---~~-~-Vvvf~~~~Cp~C~~alk~~L~~~~~---~-~i~~~~vdid~~~~~~~~~~~l~-~~~g~~tvP~ 85 (118)
T 3c1r_A 16 KHVKDLIA---EN-E-IFVASKTYCPYCHAALNTLFEKLKV---P-RSKVLVLQLNDMKEGADIQAALY-EINGQRTVPN 85 (118)
T ss_dssp HHHHHHHH---HS-S-EEEEECSSCHHHHHHHHHHHTTSCC---C-GGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHc---cC-c-EEEEEcCCCcCHHHHHHHHHHHcCC---C-CCCeEEEECccCCChHHHHHHHH-HHhCCCCcCE
Confidence 45555554 23 2 555999999999999 887766531 1 3778888888762 2577 7889999998
Q ss_pred EEEEeCCC
Q 042284 399 ILFFPKHS 406 (430)
Q Consensus 399 l~~~~~g~ 406 (430)
+ |.+|+
T Consensus 86 v--fi~g~ 91 (118)
T 3c1r_A 86 I--YINGK 91 (118)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 7 45776
No 286
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.89 E-value=1.3e-05 Score=61.91 Aligned_cols=70 Identities=11% Similarity=0.112 Sum_probs=50.3
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC----c----hHHHHHhCCCCCCCEEEEEeCCCcceeecC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD----H----KEFAKQKLQLVSFPTILFFPKHSAKPVKYP 413 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~----~----~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~ 413 (430)
++.|+++||++|+.+.+.++++. +.+-.+|++.. . +++. +.+++.++|++++ +|+ .+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g-------i~~~~~~v~~~~~~~~~~~~~~l~-~~~g~~~vP~l~~--~g~--~i--- 78 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG-------VDFEVIWIDKLEGEERKKVIEKVH-SISGSYSVPVVVK--GDK--HV--- 78 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCCHHHHHHHHHHHH-HHHSSSCSCEEEE--TTE--EE---
T ss_pred EEEEECCCChHHHHHHHHHHHcC-------CCcEEEEeeeCCccchHHHHHHHH-HhcCCCCcCEEEE--CCE--EE---
Confidence 56699999999999999888762 34445666531 1 4556 6788999999876 554 22
Q ss_pred CCCCCHHHHHHHHH
Q 042284 414 SEKRDVDSLMAFVN 427 (430)
Q Consensus 414 gg~~~~~~l~~~i~ 427 (430)
+| .+.++|.++|+
T Consensus 79 ~G-~~~~~l~~~l~ 91 (92)
T 3ic4_A 79 LG-YNEEKLKELIR 91 (92)
T ss_dssp ES-CCHHHHHHHHH
T ss_pred eC-CCHHHHHHHhc
Confidence 22 58999999986
No 287
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.88 E-value=1.4e-05 Score=67.78 Aligned_cols=66 Identities=12% Similarity=0.183 Sum_probs=46.3
Q ss_pred chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--ch----HHHHHhCCCCCCCEE
Q 042284 326 TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--HK----EFAKQKLQLVSFPTI 399 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--~~----~l~~~~~~V~~~Ptl 399 (430)
+.+++++. .. .++| |+++||++|+.+.+.|+++. +.+..+|++.. .+ ++. +.+++.++|++
T Consensus 40 ~~~~~~i~---~~-~Vvv-f~~~~Cp~C~~~k~~L~~~~-------i~~~~vdId~~~~~~~~~~~L~-~~~g~~tvP~i 106 (146)
T 2ht9_A 40 NQIQETIS---DN-CVVI-FSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPRI 106 (146)
T ss_dssp HHHHHHHH---HC-SEEE-EECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCTTHHHHHHHHH-HHHSCCCSCEE
T ss_pred HHHHHHhc---CC-CEEE-EECCCChhHHHHHHHHHHcC-------CCeEEEECccCcCCHHHHHHHH-HHhCCCCcCeE
Confidence 55666654 33 4444 99999999999999998762 34555666543 12 367 78999999998
Q ss_pred EEEeCCC
Q 042284 400 LFFPKHS 406 (430)
Q Consensus 400 ~~~~~g~ 406 (430)
+ .+|+
T Consensus 107 f--i~G~ 111 (146)
T 2ht9_A 107 F--VNGT 111 (146)
T ss_dssp E--ETTE
T ss_pred E--ECCE
Confidence 4 4665
No 288
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.88 E-value=2.5e-05 Score=61.59 Aligned_cols=59 Identities=22% Similarity=0.330 Sum_probs=43.9
Q ss_pred CCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHH---HhC-CCCCCCEEEEEeCCC
Q 042284 338 EDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK---QKL-QLVSFPTILFFPKHS 406 (430)
Q Consensus 338 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~---~~~-~V~~~Ptl~~~~~g~ 406 (430)
...-++.|+++||++|+.+++.|+++ ++.+..+|++.+ ++... +.. +..++|++ |.+|+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~-~~~~~~l~~~~~g~~~vP~i--fi~g~ 76 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCIDGD-NEAREAMAARANGKRSLPQI--FIDDQ 76 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECTTC-HHHHHHHHHHTTTCCCSCEE--EETTE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcCCC-HHHHHHHHHHhCCCCCCCEE--EECCE
Confidence 44556669999999999999998875 366777898887 55440 333 89999987 44665
No 289
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.87 E-value=2.5e-05 Score=71.01 Aligned_cols=89 Identities=13% Similarity=0.259 Sum_probs=65.1
Q ss_pred cEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHHHhCC
Q 042284 340 PWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAKQKLQ 392 (430)
Q Consensus 340 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~~~~~ 392 (430)
.+|+.|+++||+.|....+.|.+++++++..++.++.|.+|.. +..++ +.|+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va-~~yg 112 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELA-NKLK 112 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHH-HHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHH-HHhC
Confidence 4555568999999999999999999999876799999887632 13456 6777
Q ss_pred CC------------CCCEEEEEeCCCcceeecCC---CCCCHHHHHHHHHHh
Q 042284 393 LV------------SFPTILFFPKHSAKPVKYPS---EKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 V~------------~~Ptl~~~~~g~~~~~~~~g---g~~~~~~l~~~i~~~ 429 (430)
+. .+|++++++..+.+...+.+ ..++.++|.+.|+++
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 73 37999999765543332211 136899999988875
No 290
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.87 E-value=0.00011 Score=63.90 Aligned_cols=92 Identities=16% Similarity=0.353 Sum_probs=61.5
Q ss_pred CCCcEEEEEeCCCCH-hHHHHHHHHHHHHHHHcC--CCeEEEEEEcCCC--ch----HHHHHhCC---------------
Q 042284 337 REDPWLIVLYAPWCH-FCQAMEGSYIELAEQLEG--MGVKVGKFRADGD--HK----EFAKQKLQ--------------- 392 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~-~C~~~~p~~~~la~~~~~--~~v~~~~Vd~~~~--~~----~l~~~~~~--------------- 392 (430)
.+|++||+||.+||+ .|....+.+.++.+.++. .++.++.|.+|-. .+ +.+ ++|+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~-~~~~~~~~~~~~ltg~~~~ 109 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFI-QKFTEDTSNWNLLTGYSLE 109 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHH-TTTCSCCTTEEEEBCSCHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHH-HHcCCCCCCceecCcccHH
Confidence 589999999999996 799999999888887753 3688888877521 11 122 2222
Q ss_pred ---------------------CCCCCEEEEEeCCCcceeecCC-CCCCHHHHHHHHHHh
Q 042284 393 ---------------------LVSFPTILFFPKHSAKPVKYPS-EKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 ---------------------V~~~Ptl~~~~~g~~~~~~~~g-g~~~~~~l~~~i~~~ 429 (430)
|...|++++++..++....|.| .....++|.+-|++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~L 168 (170)
T 4hde_A 110 DITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRL 168 (170)
T ss_dssp HHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHH
Confidence 2234678888665543444544 235578888887765
No 291
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.85 E-value=0.00012 Score=64.64 Aligned_cols=42 Identities=10% Similarity=0.193 Sum_probs=35.6
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA 379 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~ 379 (430)
..+++|+.|+.++|++|..+.|.+.++.+.+++ ++.|..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 356789999999999999999999999988876 677766654
No 292
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.84 E-value=6.5e-05 Score=65.32 Aligned_cols=42 Identities=19% Similarity=0.127 Sum_probs=34.6
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHH--cCCCeEEEEEEc
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQL--EGMGVKVGKFRA 379 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~--~~~~v~~~~Vd~ 379 (430)
..+.+|+.|+..+|++|+.+.|.+.++.++| .+ ++.+...+.
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeC
Confidence 4567899999999999999999999998888 55 577666543
No 293
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.83 E-value=2.6e-05 Score=66.26 Aligned_cols=80 Identities=19% Similarity=0.346 Sum_probs=58.7
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC-----C-----------------------------
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG-----D----------------------------- 382 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~-----~----------------------------- 382 (430)
..+.+|+.|+.++|++|+++.+.++++ . ++.+..++.-- +
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 567899999999999999999988754 2 35555442100 0
Q ss_pred -----------chHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 383 -----------HKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 383 -----------~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+.+++ ++++|+++||+++ .+|+ . ..| ..+.+.|.++|++.
T Consensus 87 ~~~~~~~~v~~~~~la-~~~gI~gtPt~vi-~nG~--~--i~G-~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 87 GGSICDNPVAETTSLG-EQFGFNGTPTLVF-PNGR--T--QSG-YSPMPQLEEIIRKN 137 (147)
T ss_dssp TCCCCSCSHHHHHHHH-HHTTCCSSCEEEC-TTSC--E--EES-CCCTTHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHH-HHhCCCccCEEEE-ECCE--E--eeC-CCCHHHHHHHHHHH
Confidence 14567 8999999999988 5665 2 334 57888999999865
No 294
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=97.83 E-value=7.8e-05 Score=70.11 Aligned_cols=154 Identities=13% Similarity=0.139 Sum_probs=84.9
Q ss_pred HHHHHHHHHHcC--CcEEEEechhHHHHHH-HHHHhcC-----------CCcEEEEecCCCCCHHHHHHHHHHHHHhCC-
Q 042284 62 LEIMDKAFQKFG--NDIAIAFSGAEDVVLI-EYAKLTG-----------RPFRVFSLDTGRLNPETHQFFDTVEKHYGI- 126 (430)
Q Consensus 62 ~~~i~~~~~~~~--~~i~vs~SGGKDS~vl-~l~~~~~-----------~~i~vi~~DTg~~fpet~~~~~~~~~~~gl- 126 (430)
...|+..+++.+ .+++|++|||-||+++ .|+.++. ..+..++++.+.. +..+.++++++.+|+
T Consensus 27 ~~~L~~~l~~~g~~~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~~--~~~~dA~~va~~lgi~ 104 (275)
T 1wxi_A 27 VDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQ--ADEQDCQDAIAFIQPD 104 (275)
T ss_dssp HHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSC--TTHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCCCCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCCc--cCHHHHHHHHHHcCCC
Confidence 345555566544 4699999999999776 5555542 2566778876543 357889999999998
Q ss_pred cEEEEccCc--hHHHHHHHhcCCCCCCccchhhhhhh---hchHHHHHHHhcCc--eEEEeeeccCCcccccCCCeeeec
Q 042284 127 RIEYTFPNA--VEVQALVRTKGLFSFYEDGHQECCRI---RKVRPLKRALKGLR--AWITGQRKDQSPGTRAEIPVVQID 199 (430)
Q Consensus 127 ~i~~~~p~~--~~~~~~~~~~g~~~~~~~~~~~cc~~---~K~~pl~~~~~~~~--~~i~G~R~~Es~~~R~~~~~~~~d 199 (430)
+++++.-.. ..+...+...|.+. .+... |++ .+...+........ ++-||.. +|. .....
T Consensus 105 ~~~~i~i~~~~~~~~~~l~~~g~~~---~~~~~-~N~~aR~r~~~l~~~A~~~g~lvlgTgn~-~E~---~~Gy~----- 171 (275)
T 1wxi_A 105 RVLTVNIKGAVLASEQALREAGIEL---SDFVR-GNEKARERMKAQYSIAGMTSGVVVGTDHA-AEA---ITGFF----- 171 (275)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCCC---CHHHH-HHHHHHHHHHHHHHHHHHTTEEEBCCCCH-HHH---TTTCS-----
T ss_pred eEEEEecHHHHHHHHHHHHhcCCCC---CCchh-hhhhhhHHHHHHHHHHHHCCCEEEECccH-HHH---ccCcc-----
Confidence 776653221 11222222223311 11111 222 22223333333333 3333322 222 11110
Q ss_pred CCCCcccCCCCCeEEEecccccchHHHHHHHHHcCCC
Q 042284 200 TSFEGIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 200 ~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~~lp 236 (430)
..++ . ..--+.||.++++.||+...+..|+|
T Consensus 172 t~~g----d--~~~~~~PL~~l~K~eVr~la~~lglp 202 (275)
T 1wxi_A 172 TKYG----D--GGTDINPLYRLNKRQGKQLLAALACP 202 (275)
T ss_dssp CTTT----T--TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred cccC----C--CccceeeccCCCHHHHHHHHHHhCCc
Confidence 1111 0 12248999999999999999999997
No 295
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.81 E-value=1.8e-05 Score=68.92 Aligned_cols=43 Identities=14% Similarity=0.198 Sum_probs=36.7
Q ss_pred CcEEEEEeCCCCHhHHHH-HHHHHHHHHHHcCCCeE-EEEEEcCC
Q 042284 339 DPWLIVLYAPWCHFCQAM-EGSYIELAEQLEGMGVK-VGKFRADG 381 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~-~~~Vd~~~ 381 (430)
+.||+.||++||++|... .|.|.++++++++.++. ++.|+.+.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~ 89 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAIND 89 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSC
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 477888999999999999 99999999998765677 88887753
No 296
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.81 E-value=7e-05 Score=65.35 Aligned_cols=40 Identities=25% Similarity=0.476 Sum_probs=33.9
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEE
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKF 377 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~V 377 (430)
.++++||.|+.-.||+|+.+.|.+.++.+++.+ ++.+..+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 467899999999999999999999999999876 4555544
No 297
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.77 E-value=8e-05 Score=58.97 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=48.7
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc----hHHH---HHhCCCCCCCEEEEEeCCCcceee
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH----KEFA---KQKLQLVSFPTILFFPKHSAKPVK 411 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~----~~l~---~~~~~V~~~Ptl~~~~~g~~~~~~ 411 (430)
+.-++.|+++||++|+.+++.+++.. +.+-.+|++..+ +++. .+.+++.++|++++ +|+. .
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~-------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~-~-- 88 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG-------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEK-A-- 88 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT-------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTE-E--
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC-------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCE-E--
Confidence 34466699999999999999988752 445556665421 2222 03468999999876 4421 2
Q ss_pred cCCCCCCHHHHHHHH
Q 042284 412 YPSEKRDVDSLMAFV 426 (430)
Q Consensus 412 ~~gg~~~~~~l~~~i 426 (430)
.|| .+.++|.++|
T Consensus 89 -igg-~~~~~l~~~L 101 (103)
T 3nzn_A 89 -IVG-FKEKEIRESL 101 (103)
T ss_dssp -EES-CCHHHHHHHT
T ss_pred -EEc-CCHHHHHHHh
Confidence 232 6788888876
No 298
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.76 E-value=0.00015 Score=67.18 Aligned_cols=97 Identities=12% Similarity=0.249 Sum_probs=76.2
Q ss_pred CCceEcc-cchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCC
Q 042284 318 QKLVSFR-RTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSF 396 (430)
Q Consensus 318 ~~v~~lt-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~ 396 (430)
+.|.+|+ .++++.++. .++.++|-|+++|| ....+.|.++|+.+.+ .+.|+.+ .+ .+++ ++|++.+
T Consensus 6 P~v~~l~s~~~~~~~l~---~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~-~~~F~~~---~~-~~v~-~~~~~~~- 72 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFIS---DKDASIVGFFDDSF---SEAHSEFLKAASNLRD-NYRFAHT---NV-ESLV-NEYDDNG- 72 (252)
T ss_dssp CCEEECCSHHHHHHHHT---SSSCEEEEEESCTT---SHHHHHHHHHHHHTTT-TSCEEEE---CC-HHHH-HHHCSSS-
T ss_pred CCceeecCHHHHHHHhh---cCCeEEEEEECCCC---ChHHHHHHHHHHhccc-CcEEEEE---Ch-HHHH-HHhCCCC-
Confidence 4688885 466777665 67788999999985 4567789999999977 6888877 34 6788 8999997
Q ss_pred CEEEEEeCCC------cceeec-CCCCCCHHHHHHHHHH
Q 042284 397 PTILFFPKHS------AKPVKY-PSEKRDVDSLMAFVNA 428 (430)
Q Consensus 397 Ptl~~~~~g~------~~~~~~-~gg~~~~~~l~~~i~~ 428 (430)
|++++|+++. .....| .| ..+.++|.+||..
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y~~g-~~~~~~l~~fi~~ 110 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAYTEQ-KMTSGKIKKFIQE 110 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEECCCS-SCCHHHHHHHHHH
T ss_pred CcEEEEcchhhcccccccccccCCC-CcCHHHHHHHHHh
Confidence 9999998641 226778 77 5799999999985
No 299
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.72 E-value=0.00015 Score=67.07 Aligned_cols=99 Identities=9% Similarity=0.094 Sum_probs=77.9
Q ss_pred CCceEccc-chHHHHHHhcCC-CCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCC
Q 042284 318 QKLVSFRR-TGIENLARLQNR-EDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395 (430)
Q Consensus 318 ~~v~~lt~-~~f~~~i~~~~~-~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~ 395 (430)
+.|.+|++ +++++++. . ++.++|-|++++| ....+.|.++|+.+.+ .+.|+.. .+ .+++ ++|++..
T Consensus 6 P~v~~l~s~~~~~~~~~---~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~-~~~F~~t---~~-~~v~-~~~~v~~ 73 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLK---DGDDVVILGVFQGVG---DPGYLQYQDAANTLRE-DYKFHHT---FS-TEIA-KFLKVSL 73 (250)
T ss_dssp CSSEECCCHHHHHHHHH---HCSSCEEEEECSCTT---CHHHHHHHHHHHHHTT-TCCEEEE---CC-HHHH-HHHTCCS
T ss_pred CCceecCCHHHHHHHHh---cCCCeEEEEEEcCCC---chHHHHHHHHHHhhhc-CcEEEEE---Cc-HHHH-HHcCCCC
Confidence 45778865 78888776 5 7899999999985 4678899999999977 6888886 34 7888 8899987
Q ss_pred CCEEEEEeCCC------cceeecCC-CCCCHHHHHHHHHHh
Q 042284 396 FPTILFFPKHS------AKPVKYPS-EKRDVDSLMAFVNAL 429 (430)
Q Consensus 396 ~Ptl~~~~~g~------~~~~~~~g-g~~~~~~l~~~i~~~ 429 (430)
|++++|+++. .....|.| +..+.++|.+||...
T Consensus 74 -p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~ 113 (250)
T 3ec3_A 74 -GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH 113 (250)
T ss_dssp -SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH
T ss_pred -CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHc
Confidence 9999998631 22566765 468999999999753
No 300
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.70 E-value=5.7e-05 Score=56.65 Aligned_cols=68 Identities=18% Similarity=0.344 Sum_probs=48.0
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc---hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH---KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRD 418 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~---~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~ 418 (430)
++.|+++||++|+.+.+.+++. ++.+..+|++.+. .++. +.+++.++|+++ .+|+ .+ +|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~~~~~~~~~~-~~~~~~~vP~l~--~~g~--~i---~g--- 64 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPIDGNAAKREEMI-KRSGRTTVPQIF--IDAQ--HI---GG--- 64 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECTTCSHHHHHHH-HHHSSCCSCEEE--ETTE--EE---ES---
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECCCCHHHHHHHH-HHhCCCCcCEEE--ECCE--EE---eC---
Confidence 5679999999999999988764 2567778887651 2345 678999999984 4665 22 22
Q ss_pred HHHHHHHHH
Q 042284 419 VDSLMAFVN 427 (430)
Q Consensus 419 ~~~l~~~i~ 427 (430)
.++|.++++
T Consensus 65 ~~~i~~~~~ 73 (82)
T 1fov_A 65 YDDLYALDA 73 (82)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 356776665
No 301
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.68 E-value=0.00026 Score=69.70 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=81.3
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCC-HhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCC--
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWC-HFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLV-- 394 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC-~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~-- 394 (430)
+.|.+++.+++..+.. .+.+++|.|+.++| ..++.+...+.+++..+++ ++.|+.+|+++. +.++ +.|++.
T Consensus 219 p~v~elt~~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~~~-~~~~-~~~gl~~~ 292 (382)
T 2r2j_A 219 PLVREITFENGEELTE---EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCDKF-RHPL-LHIQKTPA 292 (382)
T ss_dssp CSSEECCHHHHHHHHT---TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETTTT-HHHH-HHTTCCGG
T ss_pred CceEecChhhHHHHhc---CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchHHh-HHHH-HHcCCCcc
Confidence 5789999999998764 78899999999988 4566676777777767776 899999999998 8888 899997
Q ss_pred CCCEEEEEeCCCcceeecCC--CCCCHHHHHHHHHHh
Q 042284 395 SFPTILFFPKHSAKPVKYPS--EKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~~~~~~g--g~~~~~~l~~~i~~~ 429 (430)
.+|.++++..++ ...+.. +..+.+.|.+||+.+
T Consensus 293 ~~P~i~i~~~~~--~y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 293 DCPVIAIDSFRH--MYVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp GCSEEEEECSSC--EEECCCSGGGGSTTHHHHHHHHH
T ss_pred CCCEEEEEcchh--cCCCCccccccCHHHHHHHHHHH
Confidence 689999886554 333321 134678899999865
No 302
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.66 E-value=6.7e-05 Score=57.82 Aligned_cols=55 Identities=20% Similarity=0.393 Sum_probs=42.0
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchH----HHHHhCCCCCCCEEEEEeCCC
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE----FAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~----l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
-++.|+++||++|+.+.+.+++. ++.|..+|++++ +. +. +.+++.++|++ |.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~~~-~~~~~~l~-~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-------GAEFNEIDASAT-PELRAEMQ-ERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEESTTS-HHHHHHHH-HHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHH-HHhCCCCcCEE--EECCE
Confidence 36779999999999999988764 367778888876 43 44 47789999975 44665
No 303
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.65 E-value=5.1e-05 Score=61.11 Aligned_cols=55 Identities=16% Similarity=0.405 Sum_probs=39.4
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---chH----HHHHhCCCCCCCEEEEEeCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---HKE----FAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---~~~----l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
++.|+++||++|+.+++.|+++ ++.+-.+|++.. +++ +. +.+++..+|++ |.+|+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~~~~~l~-~~~g~~tvP~i--fi~g~ 82 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELDQLGPQGPQLQKVLE-RLTGQHTVPNV--FVCGK 82 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHHHH-HHHSCCSSCEE--EETTE
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEeecCCCChHHHHHHHH-HHhCCCCcCEE--EECCE
Confidence 5669999999999999988764 245556676652 122 44 45689999998 45665
No 304
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=97.62 E-value=0.00011 Score=67.13 Aligned_cols=126 Identities=17% Similarity=0.235 Sum_probs=77.7
Q ss_pred cEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCH------HHHHHHHHHHHHhCCcEEEEccCchHHHHHHHhcCC
Q 042284 75 DIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNP------ETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRTKGL 147 (430)
Q Consensus 75 ~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fp------et~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~ 147 (430)
++++++||||||++. +++.+.+.++..++...+.... .-.+.+++.++.+|+++.++.-...
T Consensus 6 Kvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~----------- 74 (237)
T 3rjz_A 6 DVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGE----------- 74 (237)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------------
T ss_pred EEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCC-----------
Confidence 589999999999775 7777777777666544433211 1146788899999999977643211
Q ss_pred CCCCccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEecccccchHH
Q 042284 148 FSFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQD 225 (430)
Q Consensus 148 ~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~d 225 (430)
.-..++.|.++++ +.++++.|--..+- +|......-.. -+..-+.||......+
T Consensus 75 ------------~~~e~e~l~~~l~~~~i~~vv~Gdi~s~y--qr~r~e~vc~~----------~gl~~~~PLW~~d~~~ 130 (237)
T 3rjz_A 75 ------------KEKEVEDLKRVLSGLKIQGIVAGALASKY--QRKRIEKVAKE----------LGLEVYTPAWGRDAKE 130 (237)
T ss_dssp ---------------CHHHHHHHHTTSCCSEEECC---CCS--HHHHHHHHHHH----------TTCEEECSSSSCCHHH
T ss_pred ------------chHHHHHHHHHHHhcCCcEEEECCcchHH--HHHHHHHHHHH----------cCCEEEccccCCCHHH
Confidence 0123456666666 45688888877765 44443221111 1467789999988888
Q ss_pred HHHHHHHcCC
Q 042284 226 IWNFLRAMNI 235 (430)
Q Consensus 226 Vw~yi~~~~l 235 (430)
+..-+...|+
T Consensus 131 Ll~e~i~~G~ 140 (237)
T 3rjz_A 131 YMRELLNLGF 140 (237)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHCCC
Confidence 7776666554
No 305
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=97.54 E-value=0.00016 Score=69.04 Aligned_cols=118 Identities=11% Similarity=0.012 Sum_probs=77.7
Q ss_pred cEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHh-------CCcEEEEccCchHHHHHHHhcC
Q 042284 75 DIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHY-------GIRIEYTFPNAVEVQALVRTKG 146 (430)
Q Consensus 75 ~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~-------gl~i~~~~p~~~~~~~~~~~~g 146 (430)
+++|++|| .||+|+ +++.+.+.++..+|++++. ...+.++++++.+ +++++++.+ +.+..
T Consensus 181 kvlvllSG-vDS~vaa~ll~~~G~~v~~v~~~~~~---~~~~~a~~~a~~l~~~~~~~~i~~~vv~~----~~~~~---- 248 (307)
T 1vbk_A 181 RMIGILHD-ELSALAIFLMMKRGVEVIPVYIGKDD---KNLEKVRSLWNLLKRYSYGSKGFLVVAES----FDRVL---- 248 (307)
T ss_dssp EEEEECSS-HHHHHHHHHHHHBTCEEEEEEESCSS---HHHHHHHHHHHHHHTTCTTSCCCCEEESS----HHHHH----
T ss_pred cEEEEEeC-CcHHHHHHHHHhCCCeEEEEEEEECH---HHHHHHHHHHHHHhhhccCCCCcEEEeCC----CHHHH----
Confidence 68999999 999776 7888889999999999552 4466777888877 666666521 11110
Q ss_pred CCCCCccchhhhhhhhchHHHHHHH-hcCceEEEeeeccCCcccccCCCeeeecCCCCcccCCCCCeEEEecccccchHH
Q 042284 147 LFSFYEDGHQECCRIRKVRPLKRAL-KGLRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQD 225 (430)
Q Consensus 147 ~~~~~~~~~~~cc~~~K~~pl~~~~-~~~~~~i~G~R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~d 225 (430)
.-+. .+++.++||....|-..+...+...... ....-+.||.++++.|
T Consensus 249 ---------------------~~A~~~ga~~I~tG~~~~~~~~qt~~l~~~~~~----------~~~~vl~PL~~~~K~e 297 (307)
T 1vbk_A 249 ---------------------KLIRDFGVKGVIKGLRPNDLNSEVSEITEDFKM----------FPVPVYYPLIALPEEY 297 (307)
T ss_dssp ---------------------HHHHHHTCCEEECCCCGGGCCTTCHHHHHHHHH----------CSSCEECHHHHSCHHH
T ss_pred ---------------------HHHHHcCCCEEEECcccchhccccHHHhhhccC----------cCCeEEEccCCCCHHH
Confidence 1111 2778999999865421111111111111 0123578999999999
Q ss_pred HHHHHHHcCC
Q 042284 226 IWNFLRAMNI 235 (430)
Q Consensus 226 Vw~yi~~~~l 235 (430)
|..+.++.|+
T Consensus 298 I~~~a~~iGl 307 (307)
T 1vbk_A 298 IKSVKERLGL 307 (307)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 9999998875
No 306
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.50 E-value=0.00031 Score=53.32 Aligned_cols=74 Identities=9% Similarity=0.089 Sum_probs=48.4
Q ss_pred cEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc---hHHHHHhCCC-----CCCCEEEEEeCCCcceee
Q 042284 340 PWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH---KEFAKQKLQL-----VSFPTILFFPKHSAKPVK 411 (430)
Q Consensus 340 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~---~~l~~~~~~V-----~~~Ptl~~~~~g~~~~~~ 411 (430)
..++.|+++||++|+.+++.++++. - .+.+..||.+.+. .++. +.++. .++|++++ +|+ .+
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i-~~~~~~vd~~~~~~~~~el~-~~~g~~~~~~~~vP~i~i--~g~--~i- 72 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----I-AFDETIIDDYAQRSKFYDEM-NQSGKVIFPISTVPQIFI--DDE--HI- 72 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----C-CCEEEECCSHHHHHHHHHHH-HTTTCCSSCCCSSCEEEE--TTE--EE-
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----C-CceEEEeecCCChhHHHHHH-HHhCCCCCCCCccCEEEE--CCE--EE-
Confidence 3477799999999999998886642 1 3555555554331 3466 67777 99999854 665 22
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 042284 412 YPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 412 ~~gg~~~~~~l~~~i~~~ 429 (430)
|| .+++.++++++
T Consensus 73 --~g---~~~i~~~~~~~ 85 (89)
T 3msz_A 73 --GG---FTELKANADKI 85 (89)
T ss_dssp --ES---HHHHHHTHHHH
T ss_pred --eC---hHHHHHHHHHH
Confidence 22 45666666543
No 307
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.41 E-value=0.00016 Score=64.16 Aligned_cols=43 Identities=9% Similarity=0.214 Sum_probs=38.8
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD 380 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~ 380 (430)
.++++||.|+++||++|+.+.|.++++.+.+.+ ++.|..+++.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 468899999999999999999999999999887 7889888764
No 308
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.32 E-value=0.00032 Score=62.14 Aligned_cols=41 Identities=20% Similarity=0.525 Sum_probs=34.1
Q ss_pred CCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEc
Q 042284 338 EDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRA 379 (430)
Q Consensus 338 ~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~ 379 (430)
.+++||.|+..+|++|+.+.|.+ .++.+.+.+ ++.|..++.
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~ 64 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHV 64 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEEC
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEec
Confidence 47899999999999999999986 699999986 466665543
No 309
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.31 E-value=0.00044 Score=55.25 Aligned_cols=66 Identities=15% Similarity=0.338 Sum_probs=47.0
Q ss_pred chHHHHHHhcCCCCcEEEEEeC-----CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHH---HhCCCCCCC
Q 042284 326 TGIENLARLQNREDPWLIVLYA-----PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK---QKLQLVSFP 397 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~---~~~~V~~~P 397 (430)
+.+++++. .+ .|+| |+. +||++|+..++.|++. ++.|..+|++.+ +++.. +..+...+|
T Consensus 6 ~~~~~~i~---~~-~vvv-y~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~~-~~~~~~l~~~~g~~~vP 72 (109)
T 1wik_A 6 SGLKVLTN---KA-SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLKTFSNWPTYP 72 (109)
T ss_dssp CCHHHHHT---TS-SEEE-EESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESSSC-HHHHHHHHHHHSCCSSC
T ss_pred HHHHHHhc---cC-CEEE-EEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECCCC-HHHHHHHHHHhCCCCCC
Confidence 55677664 33 4544 666 9999999999988764 377889999887 54330 455788999
Q ss_pred EEEEEeCCC
Q 042284 398 TILFFPKHS 406 (430)
Q Consensus 398 tl~~~~~g~ 406 (430)
++ |.+|+
T Consensus 73 ~i--fi~g~ 79 (109)
T 1wik_A 73 QL--YVRGD 79 (109)
T ss_dssp EE--ECSSS
T ss_pred EE--EECCE
Confidence 85 55776
No 310
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.30 E-value=0.00022 Score=59.03 Aligned_cols=70 Identities=14% Similarity=0.292 Sum_probs=46.4
Q ss_pred cchHHHHHHhcCCCCcEEEEEeCCCCHhHHHH-HHHHHHHHHHHcCCCeEEEEEEcCCCc------hHHHHHhCCCCCCC
Q 042284 325 RTGIENLARLQNREDPWLIVLYAPWCHFCQAM-EGSYIELAEQLEGMGVKVGKFRADGDH------KEFAKQKLQLVSFP 397 (430)
Q Consensus 325 ~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~Vd~~~~~------~~l~~~~~~V~~~P 397 (430)
.+.+++++. ..+ ++.|+++||++|+.. ++.|+++... .+.+..+|++... .++. +.+++.++|
T Consensus 27 ~~~v~~~i~---~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----~i~~~~vdvd~~~~~~~~~~~L~-~~~g~~tVP 96 (129)
T 3ctg_A 27 VAHVKDLIG---QKE--VFVAAKTYCPYCKATLSTLFQELNVP----KSKALVLELDEMSNGSEIQDALE-EISGQKTVP 96 (129)
T ss_dssp HHHHHHHHH---HSS--EEEEECTTCHHHHHHHHHHHTTSCCC----GGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSC
T ss_pred HHHHHHHHc---CCC--EEEEECCCCCchHHHHHHHHHhcCcc----CCCcEEEEccccCCHHHHHHHHH-HHhCCCCCC
Confidence 345555554 333 567999999999999 8877665311 2455566665441 3566 778999999
Q ss_pred EEEEEeCCC
Q 042284 398 TILFFPKHS 406 (430)
Q Consensus 398 tl~~~~~g~ 406 (430)
++ |.+|+
T Consensus 97 ~v--fi~g~ 103 (129)
T 3ctg_A 97 NV--YINGK 103 (129)
T ss_dssp EE--EETTE
T ss_pred EE--EECCE
Confidence 96 45665
No 311
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.29 E-value=0.00028 Score=56.93 Aligned_cols=66 Identities=14% Similarity=0.283 Sum_probs=44.7
Q ss_pred chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--c----hHHHHHhCCCCCCCEE
Q 042284 326 TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--H----KEFAKQKLQLVSFPTI 399 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--~----~~l~~~~~~V~~~Ptl 399 (430)
+.++++++ .+ .|+ .|+++||++|+..++.|+++ ++.+-.+|++.. . ..+. +..+..++|++
T Consensus 8 ~~~~~~i~---~~-~v~-vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd~~~~~~~~~~~l~-~~~g~~tvP~v 74 (114)
T 3h8q_A 8 RHLVGLIE---RS-RVV-IFSKSYCPHSTRVKELFSSL-------GVECNVLELDQVDDGARVQEVLS-EITNQKTVPNI 74 (114)
T ss_dssp HHHHHHHH---HC-SEE-EEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTSTTHHHHHHHHH-HHHSCCSSCEE
T ss_pred HHHHHHhc---cC-CEE-EEEcCCCCcHHHHHHHHHHc-------CCCcEEEEecCCCChHHHHHHHH-HHhCCCccCEE
Confidence 45666554 33 333 39999999999999988774 255666777752 1 1244 56688999998
Q ss_pred EEEeCCC
Q 042284 400 LFFPKHS 406 (430)
Q Consensus 400 ~~~~~g~ 406 (430)
++ +|+
T Consensus 75 fi--~g~ 79 (114)
T 3h8q_A 75 FV--NKV 79 (114)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 65 665
No 312
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=97.28 E-value=0.00043 Score=73.23 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=46.1
Q ss_pred HHHHHHHHcC-CcEEEEechhHHHHHH-HHHHhc----C---CCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEc
Q 042284 64 IMDKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLT----G---RPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTF 132 (430)
Q Consensus 64 ~i~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~----~---~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~ 132 (430)
.|+..+++.+ ++++|++|||.||+++ .++.++ + .++..++++.....+++.+.++++++.+|++++++.
T Consensus 351 ~l~~~l~~~g~~~vvvglSGGvDSsvaa~l~~~a~~~lg~~~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~ 428 (680)
T 3sdb_A 351 GLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEID 428 (680)
T ss_dssp HHHHHHHHTTSCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC--------CHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHcCCCcEEEEecCCccHHHHHHHHHHHHHHhCCCCceEEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3555566666 5799999999999864 344332 3 457789999776678899999999999999987664
No 313
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.26 E-value=0.0012 Score=60.88 Aligned_cols=103 Identities=9% Similarity=0.043 Sum_probs=76.2
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCCCCH---h-HHHHHHHHHHHHHHHcC--CCeEEEEEEcCCCchHHHHHhC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAPWCH---F-CQAMEGSYIELAEQLEG--MGVKVGKFRADGDHKEFAKQKL 391 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~---~-C~~~~p~~~~la~~~~~--~~v~~~~Vd~~~~~~~l~~~~~ 391 (430)
+.|.++|.+|+..+ .+.+++|.|+.+-+. . ...+...+.++|+++++ ..+.|+.+|.+.. ..+. +.|
T Consensus 114 Plv~e~t~~n~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~-~~~~-~~f 186 (252)
T 2h8l_A 114 GICPHMTEDNKDLI-----QGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF-SHEL-SDF 186 (252)
T ss_dssp CSSCEECTTTHHHH-----SSSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT-HHHH-GGG
T ss_pred CCeeecccccHhhh-----cCCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHH-HHHH-HHc
Confidence 46999999999885 245667777754332 1 22477788899999986 1399999999988 7888 899
Q ss_pred CC----CCCCEEEEEeCCCcceeecCCCCCCHHH--HHHHHHHh
Q 042284 392 QL----VSFPTILFFPKHSAKPVKYPSEKRDVDS--LMAFVNAL 429 (430)
Q Consensus 392 ~V----~~~Ptl~~~~~g~~~~~~~~gg~~~~~~--l~~~i~~~ 429 (430)
++ ..+|.++++...+. ...+.+ ..+.+. |.+|++.+
T Consensus 187 gl~~~~~~~P~v~i~~~~~~-ky~~~~-~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 187 GLESTAGEIPVVAIRTAKGE-KFVMQE-EFSRDGKALERFLQDY 228 (252)
T ss_dssp TCCCCSCSSCEEEEECTTSC-EEECCS-CCCTTSHHHHHHHHHH
T ss_pred CCCCccCCCCEEEEEeCcCc-EecCCc-ccCcchHHHHHHHHHH
Confidence 99 36999999965332 344554 677788 99999865
No 314
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.26 E-value=0.00092 Score=60.64 Aligned_cols=87 Identities=13% Similarity=0.141 Sum_probs=60.9
Q ss_pred CCCcEEEEEeCCC-CHhHH-----HHHHHHHHHHHHHcCCCeEEEEEEcCCC----------------------chHHHH
Q 042284 337 REDPWLIVLYAPW-CHFCQ-----AMEGSYIELAEQLEGMGVKVGKFRADGD----------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fya~w-C~~C~-----~~~p~~~~la~~~~~~~v~~~~Vd~~~~----------------------~~~l~~ 388 (430)
.++++||+||+.| |++|. ...+.|.++ +. ++.++.|+.|.. +..++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~va- 120 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFH- 120 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHH-
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHH-
Confidence 4688999999988 99999 777777766 43 578888876531 14677
Q ss_pred HhCCCCC---------CCEEEEEeCCCcceee-cC---CCCCCHHHHHHHHHHh
Q 042284 389 QKLQLVS---------FPTILFFPKHSAKPVK-YP---SEKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~~---------~Ptl~~~~~g~~~~~~-~~---gg~~~~~~l~~~i~~~ 429 (430)
+.|+|.. .|++++++..+.+... .. .+..+.+++.+.|+++
T Consensus 121 k~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l 174 (224)
T 3keb_A 121 KRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEG 174 (224)
T ss_dssp HHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHh
Confidence 8898864 7999999754432222 21 1246788888888764
No 315
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.00099 Score=60.04 Aligned_cols=93 Identities=12% Similarity=0.227 Sum_probs=69.5
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.+|.+|++|| +.||+.|....+.|++...+++..++.++.|.+|.. +.+++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~va- 129 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLS- 129 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHH-
Confidence 4688999999 999999999999999999999876799999987631 14677
Q ss_pred HhCCCC------CCCEEEEEeCCCcc-eee-cC-CCCCCHHHHHHHHHHhC
Q 042284 389 QKLQLV------SFPTILFFPKHSAK-PVK-YP-SEKRDVDSLMAFVNALR 430 (430)
Q Consensus 389 ~~~~V~------~~Ptl~~~~~g~~~-~~~-~~-gg~~~~~~l~~~i~~~~ 430 (430)
+.|+|- .++.++++++.+.+ ... +. .-.++.+++...|+.++
T Consensus 130 k~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~AlQ 180 (216)
T 3sbc_A 130 RDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQ 180 (216)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHhh
Confidence 788873 35778888766542 111 11 11389999999888763
No 316
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=97.21 E-value=0.0012 Score=69.39 Aligned_cols=153 Identities=14% Similarity=0.047 Sum_probs=84.4
Q ss_pred HHHcC-CcEEEEechhHHHHHH-HHH--------HhcCCC---------------------------------cEEEEec
Q 042284 69 FQKFG-NDIAIAFSGAEDVVLI-EYA--------KLTGRP---------------------------------FRVFSLD 105 (430)
Q Consensus 69 ~~~~~-~~i~vs~SGGKDS~vl-~l~--------~~~~~~---------------------------------i~vi~~D 105 (430)
+++.+ ++++|++|||-||+++ .|+ ...+.+ +..+|..
T Consensus 298 ~~~~g~~~vvlglSGGvDSsv~A~Lv~~~~~~a~~alG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~m~ 377 (634)
T 3ilv_A 298 MRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQS 377 (634)
T ss_dssp HHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHHHHHHHHHHEEEEEEE
T ss_pred HHHhCCCeEEEEccCCHHHHHHHHHHHHHHHHHHHHhCchhhhhhhhcccccccccccccccccchhHhhhheeeeeecC
Confidence 34444 5699999999999865 331 223443 5678888
Q ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHHHH----HhcCCCCCCccchh---hhhhhhchHHHHHHHhcCceEE
Q 042284 106 TGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQALV----RTKGLFSFYEDGHQ---ECCRIRKVRPLKRALKGLRAWI 178 (430)
Q Consensus 106 Tg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~~----~~~g~~~~~~~~~~---~cc~~~K~~pl~~~~~~~~~~i 178 (430)
+...-.++.+-++++++.+|+++.++.-.. .+..+. ...|..+-+..... .++...+...+..........+
T Consensus 378 ~~~ss~~~~~dA~~la~~LGi~~~~IdI~~-~~~~~~~~~~~~~g~~p~~~~~~~~~~N~qaR~R~~~l~~~A~~~g~lv 456 (634)
T 3ilv_A 378 TRNSGDETYTSAKTLAESIGATFYNWSVDE-EIEQYKATIENVIERPLTWEKDDITLQNIQARGRAPIIWMLTNVKQALL 456 (634)
T ss_dssp CTTCCSHHHHHHHHHHHHHTCEEEEEECHH-HHHHHHHHHHHHTTSCCCTTTCHHHHHHHHHHTTHHHHHHHHHHHTCEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEEccHH-HHHHHHHHHHHhhCCCcccccCcchhhhhhHHHHHHHHHHHHHhcCCEE
Confidence 777778999999999999999987764332 122222 11232211111111 1222233333443333333233
Q ss_pred Eee-eccCCcccccCCCeeeecCCCCcccCCCCCeEEEecccccchHHHHHHHHHc----CCC
Q 042284 179 TGQ-RKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQDIWNFLRAM----NIP 236 (430)
Q Consensus 179 ~G~-R~~Es~~~R~~~~~~~~d~~~~~~~~~~~~~~~~~Pi~dWt~~dVw~yi~~~----~lp 236 (430)
.|+ .++|.. .. . -..|+ +. .--++||.+..+.+|+...+.. +||
T Consensus 457 lgTgnksE~~--~G-y-----~T~yg----D~--~~~~~Pl~~l~KteVr~la~~l~~~~glp 505 (634)
T 3ilv_A 457 ITTSNRSEGD--VG-Y-----ATMDG----DT--AGGIAPIAGVDKDFIRSWLRWAEKNRNQH 505 (634)
T ss_dssp BCCCCHHHHH--TT-C-----SCTTT----TT--CSSBBTTTTSCHHHHHHHHHHHHHHSCCG
T ss_pred eccCchhhHh--hC-C-----ccccC----Cc--ccCCcccCCCcHHHHHHHHHHHHHcCCCc
Confidence 332 222321 11 0 11111 11 1137899999999999998887 665
No 317
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.0011 Score=63.03 Aligned_cols=135 Identities=9% Similarity=0.107 Sum_probs=91.4
Q ss_pred CcccccchhhhccCC---------------CccccccCCCCCCCCCC------CCCCceEcc-cchHHHHHHhcCCCCcE
Q 042284 284 NIKQEELSQHINING---------------NGVAQHTNGSAPASDLF------NSQKLVSFR-RTGIENLARLQNREDPW 341 (430)
Q Consensus 284 ~i~~~~~~~~~n~~~---------------~~~~~~~~~~~~~~~~~------~~~~v~~lt-~~~f~~~i~~~~~~k~v 341 (430)
++..+||-.+|..+. ......+.|..++..+. ..+.+..++ .+++++++. ..++++
T Consensus 88 ~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~--~~~~~~ 165 (298)
T 3ed3_A 88 DVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLR--KSPKLS 165 (298)
T ss_dssp TCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHT--SCSSEE
T ss_pred CCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHh--cCCceE
Confidence 677889888885443 11234677777666542 335678884 477988875 225677
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHH-HhC-----CC-------------CCCCEEEEE
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK-QKL-----QL-------------VSFPTILFF 402 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~-~~~-----~V-------------~~~Ptl~~~ 402 (430)
+|.|... . ...+.|..+|..+.+ .+.|+.++-.+. ..+.. ++| +| ...|++++|
T Consensus 166 vi~fs~~-~----~~~~~f~~~A~~~~~-~~~F~~v~~~~~-a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~ 238 (298)
T 3ed3_A 166 VVLFSKQ-D----KISPVYKSIALDWLG-KFDFYSISNKKL-KQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVF 238 (298)
T ss_dssp EEEEESS-S----SCCHHHHHHHHHTBT-TEEEEEEEGGGC-CCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred EEEEcCC-C----cchHHHHHHHHHhhc-CcEEEEEcchHh-hhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEE
Confidence 7766332 2 345789999999988 899999985433 11000 011 12 679999999
Q ss_pred eCCCcceeecCCCCCCHHHHHHHHH
Q 042284 403 PKHSAKPVKYPSEKRDVDSLMAFVN 427 (430)
Q Consensus 403 ~~g~~~~~~~~gg~~~~~~l~~~i~ 427 (430)
++....+..|.|+..+.++|.+||.
T Consensus 239 ~~~~~~~~~y~g~~~~~~~i~~fi~ 263 (298)
T 3ed3_A 239 DADKDKFWEYEGNSINKNDISKFLR 263 (298)
T ss_dssp ETTTTEEEECCCSSCCHHHHHHHHH
T ss_pred cCCCCceEEeccccCCHHHHHHHHH
Confidence 8765568999876789999999997
No 318
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.11 E-value=0.0055 Score=56.40 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=76.6
Q ss_pred CCceEcccchHHHHHHhcCCCCcEEEEEeCC-CC----HhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCC
Q 042284 318 QKLVSFRRTGIENLARLQNREDPWLIVLYAP-WC----HFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQ 392 (430)
Q Consensus 318 ~~v~~lt~~~f~~~i~~~~~~k~vlV~Fya~-wC----~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~ 392 (430)
+.|.++|.+|+..+. .++++++.|+.+ .+ .....+...+.++|++++ ++.|+.+|.++. .... +.|+
T Consensus 116 Plv~e~t~~n~~~~~----~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--ki~F~~~d~~~~-~~~l-~~fg 187 (250)
T 3ec3_A 116 PLVGHRKTSNDAKRY----SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--EYTFAIADEEDY-ATEV-KDLG 187 (250)
T ss_dssp CTEEEECTTTHHHHS----CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--TSEEEEEETTTT-HHHH-HHTT
T ss_pred CceeecCccchhhhh----ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--ceeEEEEcHHHH-HHHH-HHcC
Confidence 468999999988754 367777777753 32 334567889999999998 599999999988 7788 8999
Q ss_pred CCC--C-CEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 393 LVS--F-PTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 393 V~~--~-Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
+.. + |.++++...+. ...+..+..+.++|.+|++.+
T Consensus 188 l~~~~~~p~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 188 LSESGGDVNAAILDESGK-KFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp CSSCSCSCEEEEECTTSC-EEECCCCSCCHHHHHHHHHHH
T ss_pred CCccCCCcEEEEEcCCCc-eecCCcccCCHHHHHHHHHHH
Confidence 974 4 47777754332 444543468999999999865
No 319
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.06 E-value=0.00025 Score=62.66 Aligned_cols=42 Identities=17% Similarity=0.450 Sum_probs=35.8
Q ss_pred CCcEEEEEeCCCCHhHHHHHHHH---HHHHHHHcCCCeEEEEEEcC
Q 042284 338 EDPWLIVLYAPWCHFCQAMEGSY---IELAEQLEGMGVKVGKFRAD 380 (430)
Q Consensus 338 ~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Vd~~ 380 (430)
.+++||.|++.||++|+.+.|.+ +++.+.+.+ ++.|..+++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 46899999999999999999986 688888876 6888887764
No 320
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.78 E-value=0.0008 Score=56.05 Aligned_cols=67 Identities=15% Similarity=0.265 Sum_probs=44.5
Q ss_pred chHHHHHHhcCCCCcEEEEEeC----CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHH---HhCCCCCCCE
Q 042284 326 TGIENLARLQNREDPWLIVLYA----PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK---QKLQLVSFPT 398 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~---~~~~V~~~Pt 398 (430)
+.+++++. ...|+|+.++ +||++|++.+..|+++ ++.|..+|++.+ +++.. +..+...+|.
T Consensus 26 ~~v~~~i~----~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~~d-~~~~~~L~~~~G~~tvP~ 93 (135)
T 2wci_A 26 EKIQRQIA----ENPILLYMKGSPKLPSCGFSAQAVQALAAC-------GERFAYVDILQN-PDIRAELPKYANWPTFPQ 93 (135)
T ss_dssp HHHHHHHH----HCSEEEEESBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGGGC-HHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHhc----cCCEEEEEEecCCCCCCccHHHHHHHHHHc-------CCceEEEECCCC-HHHHHHHHHHHCCCCcCE
Confidence 44555543 3456665544 9999999999888654 367888899876 54430 3347788998
Q ss_pred EEEEeCCC
Q 042284 399 ILFFPKHS 406 (430)
Q Consensus 399 l~~~~~g~ 406 (430)
++ .+|+
T Consensus 94 Vf--I~G~ 99 (135)
T 2wci_A 94 LW--VDGE 99 (135)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 64 4665
No 321
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.72 E-value=0.0081 Score=53.46 Aligned_cols=43 Identities=9% Similarity=0.117 Sum_probs=33.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHH-HHHHHHHcC-CCeEEEEEEc
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSY-IELAEQLEG-MGVKVGKFRA 379 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~Vd~ 379 (430)
..+..||.|+...|++|+.+.+.+ ..+.+.|.+ .++.|...+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 467889999999999999999876 677777742 2677776643
No 322
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.67 E-value=0.0039 Score=54.27 Aligned_cols=77 Identities=17% Similarity=0.258 Sum_probs=53.8
Q ss_pred hHHHHHHhcCCCCcEEEEEeCCCCHhHHH-HHHHHHHHHHHHcCCCe-EEEEEEcCCC----------------------
Q 042284 327 GIENLARLQNREDPWLIVLYAPWCHFCQA-MEGSYIELAEQLEGMGV-KVGKFRADGD---------------------- 382 (430)
Q Consensus 327 ~f~~~i~~~~~~k~vlV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v-~~~~Vd~~~~---------------------- 382 (430)
++.++++ .++.||+.|++.||+.|.. ..|.|.+.+++++..++ .++.|.+|..
T Consensus 40 sLsd~~~---Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~ 116 (176)
T 4f82_A 40 SVRDQVA---GKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADG 116 (176)
T ss_dssp EHHHHHT---TCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECT
T ss_pred eHHHHhC---CCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcC
Confidence 4555542 3335566777999999999 99999999999976567 7888876531
Q ss_pred chHHHHHhCCCC------C-----CCEEEEEeCCCc
Q 042284 383 HKEFAKQKLQLV------S-----FPTILFFPKHSA 407 (430)
Q Consensus 383 ~~~l~~~~~~V~------~-----~Ptl~~~~~g~~ 407 (430)
+.+++ +.|++. + .|+.+++++|+.
T Consensus 117 ~~~va-~ayGv~~~~~~~G~g~~s~R~tfII~dG~I 151 (176)
T 4f82_A 117 SAAFT-HALGLTQDLSARGMGIRSLRYAMVIDGGVV 151 (176)
T ss_dssp TCHHH-HHHTCEEECGGGTCCEEECCEEEEEETTEE
T ss_pred chHHH-HHhCCCccccccCCCcccccEEEEEcCCEE
Confidence 14567 777763 2 476666677764
No 323
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.66 E-value=0.0011 Score=58.35 Aligned_cols=39 Identities=21% Similarity=0.392 Sum_probs=33.5
Q ss_pred CCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEc
Q 042284 338 EDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRA 379 (430)
Q Consensus 338 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~ 379 (430)
++++||.|++.||++|+.+.|.++++.+.+ + +.|..+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--TDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--SCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--CeEEEEec
Confidence 578999999999999999999999999998 4 55555543
No 324
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.002 Score=53.02 Aligned_cols=71 Identities=11% Similarity=0.148 Sum_probs=42.6
Q ss_pred chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc----hHHHHHhCCCCCCCEEEE
Q 042284 326 TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH----KEFAKQKLQLVSFPTILF 401 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~----~~l~~~~~~V~~~Ptl~~ 401 (430)
++|++++. .. + ++.|..+||++|+..+..|++.. .+.- .+..+.||.+.+. ..+. +..+...+|++++
T Consensus 5 ~~~~~ii~---~~-~-Vvvysk~~Cp~C~~ak~lL~~~~-~~~v-~~~~idid~~~d~~~~~~~l~-~~~G~~tVP~IfI 76 (127)
T 3l4n_A 5 KEYSLILD---LS-P-IIIFSKSTCSYSKGMKELLENEY-QFIP-NYYIIELDKHGHGEELQEYIK-LVTGRGTVPNLLV 76 (127)
T ss_dssp HHHHHHHT---SC-S-EEEEECTTCHHHHHHHHHHHHHE-EEES-CCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEEEE
T ss_pred HHHHHHHc---cC-C-EEEEEcCCCccHHHHHHHHHHhc-ccCC-CcEEEEecCCCCHHHHHHHHH-HHcCCCCcceEEE
Confidence 56777664 33 3 56699999999999998887731 0111 2344444443321 1233 3457889999854
Q ss_pred EeCCC
Q 042284 402 FPKHS 406 (430)
Q Consensus 402 ~~~g~ 406 (430)
+|+
T Consensus 77 --~G~ 79 (127)
T 3l4n_A 77 --NGV 79 (127)
T ss_dssp --TTE
T ss_pred --CCE
Confidence 665
No 325
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.48 E-value=0.012 Score=56.50 Aligned_cols=88 Identities=5% Similarity=0.010 Sum_probs=60.5
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--------------------chHHHHHhCCCC-
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--------------------HKEFAKQKLQLV- 394 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--------------------~~~l~~~~~~V~- 394 (430)
.+|+|||+|| +.||+.|....+.|.+. ..+++.++.|+.|.. +..++ +.|+|.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~-~~ygv~~ 97 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILH-EFFNVLE 97 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHH-HHTTCEE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHH-HhcCCCC
Confidence 4789999999 67999999887776531 223588888877532 15677 899984
Q ss_pred ---CCCEEEEEeCCCcceeecCC--CCCCHHHHHHHHHHh
Q 042284 395 ---SFPTILFFPKHSAKPVKYPS--EKRDVDSLMAFVNAL 429 (430)
Q Consensus 395 ---~~Ptl~~~~~g~~~~~~~~g--g~~~~~~l~~~i~~~ 429 (430)
.+|+.++++..+.+...+.+ .....+++.++|+++
T Consensus 98 ~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 98 NGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp TTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 57888888765543222222 135688888888775
No 326
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.35 E-value=0.015 Score=52.81 Aligned_cols=42 Identities=10% Similarity=0.084 Sum_probs=32.3
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHH-HHHHHHHHcC-CCeEEEEEE
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGS-YIELAEQLEG-MGVKVGKFR 378 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~-~~~la~~~~~-~~v~~~~Vd 378 (430)
..+..|+.|+...|++|+.+.+. +.++.++|.+ .++.|...+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 45678999999999999999996 5788888832 257766543
No 327
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=96.29 E-value=0.013 Score=52.71 Aligned_cols=93 Identities=11% Similarity=0.272 Sum_probs=68.0
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC---------------------------chHHHH
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD---------------------------HKEFAK 388 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~---------------------------~~~l~~ 388 (430)
.++.+||+|| +.||+.|......|.+...+++..++.++.|.+|.. +.+++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va- 133 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIA- 133 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHH-
Confidence 4678999999 999999999999999999999887899999987641 15678
Q ss_pred HhCCCC----CC--CEEEEEeCCCcc-eee-cC-CCCCCHHHHHHHHHHhC
Q 042284 389 QKLQLV----SF--PTILFFPKHSAK-PVK-YP-SEKRDVDSLMAFVNALR 430 (430)
Q Consensus 389 ~~~~V~----~~--Ptl~~~~~g~~~-~~~-~~-gg~~~~~~l~~~i~~~~ 430 (430)
+.|+|- ++ -.+++++..+.+ .+. +. .-.++.+++...|+.++
T Consensus 134 ~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ 184 (219)
T 3tue_A 134 RSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQ 184 (219)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHhh
Confidence 888873 33 356666555532 111 21 12478999999888763
No 328
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.23 E-value=0.0078 Score=48.12 Aligned_cols=59 Identities=15% Similarity=0.354 Sum_probs=40.5
Q ss_pred CCCcEEEEEeC-----CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHH---HhCCCCCCCEEEEEeCCC
Q 042284 337 REDPWLIVLYA-----PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK---QKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 337 ~~k~vlV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~---~~~~V~~~Ptl~~~~~g~ 406 (430)
...+|+| |.. +||++|+..+..|++. ++.+..+|++.+ +++.. +..+...+|.+++ +|+
T Consensus 14 ~~~~Vvl-f~kg~~~~~~Cp~C~~ak~~L~~~-------gi~y~~~di~~d-~~~~~~l~~~~g~~tvP~ifi--~g~ 80 (111)
T 3zyw_A 14 HAAPCML-FMKGTPQEPRCGFSKQMVEILHKH-------NIQFSSFDIFSD-EEVRQGLKAYSSWPTYPQLYV--SGE 80 (111)
T ss_dssp TSSSEEE-EESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCCSSCEEEE--TTE
T ss_pred hcCCEEE-EEecCCCCCcchhHHHHHHHHHHc-------CCCeEEEECcCC-HHHHHHHHHHHCCCCCCEEEE--CCE
Confidence 3445554 677 9999999999888753 366777888876 55430 2336788999744 665
No 329
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.21 E-value=0.0078 Score=47.90 Aligned_cols=59 Identities=12% Similarity=0.242 Sum_probs=39.6
Q ss_pred CCCcEEEEEeC-----CCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHH---HhCCCCCCCEEEEEeCCC
Q 042284 337 REDPWLIVLYA-----PWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK---QKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 337 ~~k~vlV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~---~~~~V~~~Ptl~~~~~g~ 406 (430)
....|+| |.. |||++|++.+..|++. ++.+-.+|++++ +++.. +..+...+|.++ -+|+
T Consensus 16 ~~~~Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~-------gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~if--i~g~ 82 (109)
T 3ipz_A 16 NSEKVVL-FMKGTRDFPMCGFSNTVVQILKNL-------NVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLY--IGGE 82 (109)
T ss_dssp TSSSEEE-EESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEE--ETTE
T ss_pred ccCCEEE-EEecCCCCCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEE--ECCE
Confidence 3445555 444 5999999999888764 366777888776 44430 334778999764 4665
No 330
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.05 E-value=0.015 Score=53.05 Aligned_cols=58 Identities=12% Similarity=0.218 Sum_probs=42.8
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc--hHHHHHhCCCCCCCEEEEEeCCC
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH--KEFAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~--~~l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
...++.|+.+||+.|++.+..+++. ++.+-.+|++.+. .++. +.++..++|+++ .+|+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~~~~~~~~l~-~~~g~~~vP~~~--~~g~ 228 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-------GLSFEEIILGHDATIVSVR-AVSGRTTVPQVF--IGGK 228 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-------TCCCEEEETTTTCCHHHHH-HHTCCSSSCEEE--ETTE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-------CCceEEEECCCchHHHHHH-HHhCCCCcCEEE--ECCE
Confidence 4557778999999999999888764 2556667776551 3466 788999999975 3554
No 331
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=96.02 E-value=0.0058 Score=62.50 Aligned_cols=117 Identities=20% Similarity=0.157 Sum_probs=68.3
Q ss_pred HHHHHHHHH-c--CCcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHH
Q 042284 63 EIMDKAFQK-F--GNDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEV 138 (430)
Q Consensus 63 ~~i~~~~~~-~--~~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~ 138 (430)
+.|+.+++. . ..++.+.+|||.||+++ .++.+...++..+.+.... .+| .++++++++++|++.+++......+
T Consensus 228 ~~L~~aV~~rl~sd~~vgv~LSGGlDSS~vaala~~~~~~v~tfti~~~~-~~E-~~~A~~vA~~lg~~h~~i~i~~~~~ 305 (513)
T 1jgt_A 228 AALEKAVAQRVTPGDTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTDT-SNE-FREARAVVDHLRTRHREITIPTTEL 305 (513)
T ss_dssp HHHHHHHHHHSCTTCCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECSS-CCC-HHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEECCCcHHHHHHHHHHHHhCCCceEEEcCCCC-CCH-HHHHHHHHHHhCCCcEEEECCHHHH
Confidence 344444443 2 24699999999999766 6666665567777766542 333 5789999999999998776554322
Q ss_pred H----HHHHhcCCCCCCccchhhhhhhhchHHHHHHH-hcCceEEEeeeccCC
Q 042284 139 Q----ALVRTKGLFSFYEDGHQECCRIRKVRPLKRAL-KGLRAWITGQRKDQS 186 (430)
Q Consensus 139 ~----~~~~~~g~~~~~~~~~~~cc~~~K~~pl~~~~-~~~~~~i~G~R~~Es 186 (430)
. ..+.....+ ++..-+......-+.+.. .+.+++++|.-+||-
T Consensus 306 ~~~l~~~~~~~~~~-----~p~~~~~~~~~~~l~~~a~~g~~VvltG~GaDEl 353 (513)
T 1jgt_A 306 LAQLPYAVWASESV-----DPDIIEYLLPLTALYRALDGPERRILTGYGADIP 353 (513)
T ss_dssp HTTHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHCCSSCCEEECCTTTHHH
T ss_pred HHHHHHHHHHhCCC-----CcccchhHHHHHHHHHHHHcCCCEEEeCCChhhc
Confidence 1 222111110 010001112223333333 366799999988885
No 332
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=95.97 E-value=0.059 Score=49.95 Aligned_cols=79 Identities=11% Similarity=0.156 Sum_probs=54.1
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC-----------------chHHHHHhCCCCCC--CEE
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD-----------------HKEFAKQKLQLVSF--PTI 399 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~-----------------~~~l~~~~~~V~~~--Ptl 399 (430)
...+..|++++|++|...+..+++++..+ ++....++++.. +..+. ++++..++ |.+
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~-~~~G~~tVyTPqI 118 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYM-RALGRNGVYTPQA 118 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHH-HHTTCSCCCSSEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEEEecccccccchhhhhhhHHHHHHH-HHhCCCcccCCEE
Confidence 35778899999999999999999998764 344333443321 13466 78899988 997
Q ss_pred EEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 400 LFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 400 ~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
++ +|+ . ...| .+.+.|.+.|.+
T Consensus 119 ~I--ng~--~-~v~G--~d~~~l~~~l~~ 140 (270)
T 2axo_A 119 IL--NGR--D-HVKG--ADVRGIYDRLDA 140 (270)
T ss_dssp EE--TTT--E-EEET--TCHHHHHHHHHH
T ss_pred EE--CCE--E-eecC--CCHHHHHHHHHH
Confidence 65 666 2 2223 467788877754
No 333
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=95.92 E-value=0.025 Score=58.32 Aligned_cols=106 Identities=15% Similarity=0.221 Sum_probs=62.8
Q ss_pred CcEEEEechhHHHHHH-HHHHhcCCC--------------cEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHH
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLTGRP--------------FRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEV 138 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~~~~--------------i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~ 138 (430)
.++.|.+|||.||+++ .++.+...+ +..+.+.... .+| .++++++++++|++.+.+......+
T Consensus 227 vpvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~~-~~E-~~~A~~vA~~lg~~h~~i~~~~~~~ 304 (553)
T 1ct9_A 227 VPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPG-SPD-LKAAQEVANHLGTVHHEIHFTVQEG 304 (553)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTT-CHH-HHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCCC-CcH-HHHHHHHHHHhCCCCEEEECCHHHH
Confidence 4699999999999776 666665432 5566664432 255 5889999999999988776554332
Q ss_pred ----HHHHHhcCCCCCCccchhhhhhhhchHHHHHHHh--cCceEEEeeeccCC
Q 042284 139 ----QALVRTKGLFSFYEDGHQECCRIRKVRPLKRALK--GLRAWITGQRKDQS 186 (430)
Q Consensus 139 ----~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es 186 (430)
.+.+.....+ .. ....|. ....-+.+.++ +.+++++|.-+||-
T Consensus 305 ~~~l~~~i~~~~~~---~~-~~~~~~-~~~~~l~~~a~~~g~~vvLsG~GaDEl 353 (553)
T 1ct9_A 305 LDAIRDVIYHIETY---DV-TTIRAS-TPMYLMSRKIKAMGIKMVLSGEGSDEV 353 (553)
T ss_dssp HHHHHHHHHHHCCC---CH-HHHHHH-HHHHHHHHHHHHTTCCEEECCTTHHHH
T ss_pred HHHHHHHHHHhcCC---Cc-ccchHH-HHHHHHHHHHHHcCCeEEEECCCchhc
Confidence 2222222211 11 111111 12233444333 57899999998885
No 334
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=95.91 E-value=0.015 Score=43.95 Aligned_cols=55 Identities=18% Similarity=0.137 Sum_probs=39.2
Q ss_pred EEEEeCC----CCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcC-----CCchH----HHHHhCCCC-----CCCEEEEEe
Q 042284 342 LIVLYAP----WCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD-----GDHKE----FAKQKLQLV-----SFPTILFFP 403 (430)
Q Consensus 342 lV~Fya~----wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~-----~~~~~----l~~~~~~V~-----~~Ptl~~~~ 403 (430)
++.|+.+ ||++|++.+..|++. ++.+-.+|++ .+ ++ +. +..+.. ++|++++ .
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-------gi~y~~idI~~~~~~~~-~~~~~~l~-~~~g~~~~~~~tvP~v~i-~ 71 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-------KQPFEFINIMPEKGVFD-DEKIAELL-TKLGRDTQIGLTMPQVFA-P 71 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-------TCCEEEEESCSBTTBCC-HHHHHHHH-HHHTCSCCTTCCSCEEEC-T
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-------CCCEEEEEeeccccccC-HHHHHHHH-HHhCCCCCCCCccCEEEE-E
Confidence 4568899 999999999877663 3667778887 44 33 45 566777 8998753 3
Q ss_pred CCC
Q 042284 404 KHS 406 (430)
Q Consensus 404 ~g~ 406 (430)
+|+
T Consensus 72 ~g~ 74 (87)
T 1aba_A 72 DGS 74 (87)
T ss_dssp TSC
T ss_pred CCE
Confidence 555
No 335
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=95.80 E-value=0.0079 Score=61.32 Aligned_cols=107 Identities=20% Similarity=0.236 Sum_probs=63.3
Q ss_pred CcEEEEechhHHHHHH-HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEccCchHHHHH----HHhcCCC
Q 042284 74 NDIAIAFSGAEDVVLI-EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPNAVEVQAL----VRTKGLF 148 (430)
Q Consensus 74 ~~i~vs~SGGKDS~vl-~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p~~~~~~~~----~~~~g~~ 148 (430)
.++.+.+|||-||+++ .++.+...++..+.+... ..+| .++++++++++|++++++......+.+. +.....+
T Consensus 239 ~~v~v~LSGGlDSs~vaala~~~~~~~~~~t~~~~-~~~E-~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~~~~~~~~ 316 (503)
T 1q15_A 239 DTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTE-LSNE-FEFSQQVADALGTHHQMKILSETEVINGIIESIYYNEIF 316 (503)
T ss_dssp SEEEEECCSSHHHHHHHHHHTTTCSEEEEEEEEET-TBCC-HHHHHHHHHHHTCEEEEEEECHHHHHHHHHHHHHHHCCC
T ss_pred CcEEEECCCCHHHHHHHHHHHHhCCCcEEEEEeCC-CccH-HHHHHHHHHHhCCceEEEECCHHHHHHHHHHHHHHhcCC
Confidence 4699999999999776 666666655666665543 1233 5789999999999988776655433222 1111110
Q ss_pred CCCccchhhhhhhhchHHHHHHH-hcCceEEEeeeccCCc
Q 042284 149 SFYEDGHQECCRIRKVRPLKRAL-KGLRAWITGQRKDQSP 187 (430)
Q Consensus 149 ~~~~~~~~~cc~~~K~~pl~~~~-~~~~~~i~G~R~~Es~ 187 (430)
. .... +.......+.+.. .+.+++++|.-+||-.
T Consensus 317 ~----p~~~-~~~~~~~~l~~~a~~~~~VvltG~GaDElf 351 (503)
T 1q15_A 317 D----GLSA-EIQSGLFNVYRQAQGQVSCMLTGYGSDLLF 351 (503)
T ss_dssp C----HHHH-HHHHHHHHHHHHHBTTBSEEECCTTHHHHH
T ss_pred C----cccc-hhHHHHHHHHHHHHCCCCEEEeCCChhhhc
Confidence 0 0111 1112222333332 3667999999888853
No 336
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.74 E-value=0.073 Score=48.35 Aligned_cols=97 Identities=15% Similarity=0.201 Sum_probs=65.4
Q ss_pred eEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC-CCeEEEEEEcCCCchHHHHHhCCCCCCCEE
Q 042284 321 VSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRADGDHKEFAKQKLQLVSFPTI 399 (430)
Q Consensus 321 ~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl 399 (430)
..++.++++.++.. +..+++.+.|....|.. ..+++..+.. ..+.+..++- .+ .+++ ++|+|+++|++
T Consensus 141 ~~~~~~~l~~~~~~-~~~~~~al~f~~~~~~~-------~~~~~~d~~~~~~i~v~~~~~-~~-~~l~-~~f~v~~~Psl 209 (244)
T 3q6o_A 141 EPAXLEEIDGFFAR-NNEEYLALIFEXGGSYL-------AREVALDLSQHKGVAVRRVLN-TE-ANVV-RKFGVTDFPSC 209 (244)
T ss_dssp SCCCHHHHHTHHHH-CCCSEEEEEEECTTCCH-------HHHHHHHTTTCTTEEEEEEET-TC-HHHH-HHHTCCCSSEE
T ss_pred ccccHHHHHHHhhc-CCCceEEEEEEECCcch-------HHHHHHHhccCCceEEEEEeC-ch-HHHH-HHcCCCCCCeE
Confidence 33456777777653 56678888888876543 3334444443 3577766653 34 7999 99999999999
Q ss_pred EEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 400 LFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 400 ~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++|..+++ ...+.....+.+.+..+|+++
T Consensus 210 vl~~~~g~-~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 210 YLLFRNGS-VSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp EEEETTSC-EEECCCSSSSHHHHHHHHHTC
T ss_pred EEEeCCCC-eEeeccccccHHHHHHHHHhC
Confidence 88876554 555555456677788888765
No 337
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=95.72 E-value=0.054 Score=55.94 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=50.8
Q ss_pred HHHHHHcC-CcEEEEechhHHHHHH-HHHHhc-C-CCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEc
Q 042284 66 DKAFQKFG-NDIAIAFSGAEDVVLI-EYAKLT-G-RPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTF 132 (430)
Q Consensus 66 ~~~~~~~~-~~i~vs~SGGKDS~vl-~l~~~~-~-~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~ 132 (430)
+..+++-+ +.++|+.|||-||+++ .++.++ + ..+..+++-+-....+|.+-.+.+++.+|+.+..+.
T Consensus 292 ~dy~~k~g~~~~vlglSGGiDSal~~~la~~alg~~~v~~v~mp~~~ts~~t~~~a~~la~~lg~~~~~i~ 362 (565)
T 4f4h_A 292 RDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMARRVGVRYDEIA 362 (565)
T ss_dssp HHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCTTCCHHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHcCCCcEEEecCCCccHHHHHHHHHHHhCCccEEEEeccccccccchHHHHHHHHHHhCCceeeee
Confidence 33344444 5699999999999876 455443 3 346778877777889999999999999999887663
No 338
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=95.71 E-value=0.023 Score=46.11 Aligned_cols=59 Identities=17% Similarity=0.317 Sum_probs=38.8
Q ss_pred CCcEEEEEeC----CCCHhHHHHHHHHHHHHHHHcCCCeE---EEEEEcCCCchHHHH---HhCCCCCCCEEEEEeCCC
Q 042284 338 EDPWLIVLYA----PWCHFCQAMEGSYIELAEQLEGMGVK---VGKFRADGDHKEFAK---QKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 338 ~k~vlV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~---~~~Vd~~~~~~~l~~---~~~~V~~~Ptl~~~~~g~ 406 (430)
..+|+|+--. |||++|+..+..|++.. +. |..+|++.+ +++.. +..+...+|.++ -+|+
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g-------v~~~~~~~~dv~~~-~~~~~~l~~~sg~~tvP~vf--I~g~ 83 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQG-------VDPAKFAAYNVLED-PELREGIKEFSEWPTIPQLY--VNKE 83 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHT-------BCGGGEEEEECTTC-HHHHHHHHHHHTCCSSCEEE--ETTE
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcC-------CCcceEEEEEecCC-HHHHHHHHHHhCCCCCCeEE--ECCE
Confidence 3445553333 59999999998887752 44 777888776 54430 334678899874 4665
No 339
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.68 E-value=0.021 Score=45.53 Aligned_cols=55 Identities=11% Similarity=0.036 Sum_probs=37.9
Q ss_pred EEEEEeCCCCHhHH------HHHHHHHHHHHHHcCCCeEEEEEEcCCCchH----HHHHhC--------CCCCCCEEEEE
Q 042284 341 WLIVLYAPWCHFCQ------AMEGSYIELAEQLEGMGVKVGKFRADGDHKE----FAKQKL--------QLVSFPTILFF 402 (430)
Q Consensus 341 vlV~Fya~wC~~C~------~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~----l~~~~~--------~V~~~Ptl~~~ 402 (430)
-++.|+.++|+.|+ +.+..|++ . ++.|..+|++.+ ++ +. +.+ +...+|.++
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~----~---gi~y~~vdI~~~-~~~~~~l~-~~~~~~~~~~~g~~tvP~vf-- 77 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA----N---KIEFEEVDITMS-EEQRQWMY-KNVPPEKKPTQGNPLPPQIF-- 77 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH----T---TCCEEEEETTTC-HHHHHHHH-HSCCTTTCCSSSSCCSCEEE--
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH----c---CCCEEEEECCCC-HHHHHHHH-HHhcccccccCCCCCCCEEE--
Confidence 46678999999999 55555543 2 478889999877 44 33 444 666789864
Q ss_pred eCCC
Q 042284 403 PKHS 406 (430)
Q Consensus 403 ~~g~ 406 (430)
.+|+
T Consensus 78 i~g~ 81 (111)
T 2ct6_A 78 NGDR 81 (111)
T ss_dssp ETTE
T ss_pred ECCE
Confidence 4555
No 340
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=95.63 E-value=0.02 Score=43.92 Aligned_cols=54 Identities=9% Similarity=-0.028 Sum_probs=37.8
Q ss_pred EEEEeCCCCHhH------HHHHHHHHHHHHHHcCCCeEEEEEEcCCCchH----HHHHhCC--CCCCCEEEEEeCCC
Q 042284 342 LIVLYAPWCHFC------QAMEGSYIELAEQLEGMGVKVGKFRADGDHKE----FAKQKLQ--LVSFPTILFFPKHS 406 (430)
Q Consensus 342 lV~Fya~wC~~C------~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~----l~~~~~~--V~~~Ptl~~~~~g~ 406 (430)
++.|+.++|+.| +..+..|++. ++.|-.+|++.+ ++ +. +.++ ...+|.++ .+|+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~-------~i~~~~~di~~~-~~~~~~l~-~~~g~~~~~vP~if--i~g~ 69 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK-------RIQYQLVDISQD-NALRDEMR-TLAGNPKATPPQIV--NGNH 69 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT-------TCCCEEEETTSC-HHHHHHHH-HHTTCTTCCSCEEE--ETTE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC-------CCceEEEECCCC-HHHHHHHH-HHhCCCCCCCCEEE--ECCE
Confidence 556899999999 6666655532 477888999876 43 33 4667 77999874 3555
No 341
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=94.85 E-value=0.042 Score=44.32 Aligned_cols=65 Identities=17% Similarity=0.332 Sum_probs=41.9
Q ss_pred hHHHHHHhcCCCCcEEEEEeC-----CCCHhHHHHHHHHHHHHHHHcCCCeE-EEEEEcCCCchHHHH---HhCCCCCCC
Q 042284 327 GIENLARLQNREDPWLIVLYA-----PWCHFCQAMEGSYIELAEQLEGMGVK-VGKFRADGDHKEFAK---QKLQLVSFP 397 (430)
Q Consensus 327 ~f~~~i~~~~~~k~vlV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~-~~~Vd~~~~~~~l~~---~~~~V~~~P 397 (430)
..+++++ ..+|+| |.. |||++|++.+..|++. ++. +..+|++.+ +++.. +..+...+|
T Consensus 12 ~v~~~i~----~~~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~vdV~~d-~~~~~~l~~~tg~~tvP 78 (118)
T 2wem_A 12 QLDALVK----KDKVVV-FLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTIP 78 (118)
T ss_dssp HHHHHHH----HSSEEE-EESBCSSSBSSHHHHHHHHHHHHT-------TCCCCEEEESSSC-HHHHHHHHHHHTCCSSC
T ss_pred HHHHHhc----cCCEEE-EEecCCCCCccHHHHHHHHHHHHc-------CCCCCEEEEcCCC-HHHHHHHHHHhCCCCcC
Confidence 3445553 345555 555 5999999999888764 353 777888876 54430 233678899
Q ss_pred EEEEEeCCC
Q 042284 398 TILFFPKHS 406 (430)
Q Consensus 398 tl~~~~~g~ 406 (430)
.++ .+|+
T Consensus 79 ~vf--I~g~ 85 (118)
T 2wem_A 79 QVY--LNGE 85 (118)
T ss_dssp EEE--ETTE
T ss_pred eEE--ECCE
Confidence 974 4665
No 342
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=94.21 E-value=0.078 Score=46.06 Aligned_cols=41 Identities=22% Similarity=0.374 Sum_probs=34.3
Q ss_pred CCcEEEEEeCCCCHhHHHHHHHH-HHHHHHHcCCCeEEEEEEc
Q 042284 338 EDPWLIVLYAPWCHFCQAMEGSY-IELAEQLEGMGVKVGKFRA 379 (430)
Q Consensus 338 ~k~vlV~Fya~wC~~C~~~~p~~-~~la~~~~~~~v~~~~Vd~ 379 (430)
.++++|.||...||+|..+.+.+ .++.+.+.. .+.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEec
Confidence 56788999999999999999999 999998876 566666653
No 343
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=94.18 E-value=0.13 Score=52.40 Aligned_cols=97 Identities=13% Similarity=0.204 Sum_probs=62.8
Q ss_pred ceEcccchHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcC-CCeEEEEEEcCCCchHHHHHhCCCCCCCE
Q 042284 320 LVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRADGDHKEFAKQKLQLVSFPT 398 (430)
Q Consensus 320 v~~lt~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Vd~~~~~~~l~~~~~~V~~~Pt 398 (430)
+..++.++++.++. .+..++++|.|.... .+...+++..+.. ..+.+..++ +.+ .+++ ++|+|..+|+
T Consensus 140 l~~it~~~l~~~l~-~~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~-~~~-~~l~-~kfgV~~~Ps 208 (519)
T 3t58_A 140 LEPAKLNDIDGFFT-RNKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVL-NTE-SDLV-NKFGVTDFPS 208 (519)
T ss_dssp CSBCCHHHHTTGGG-SCCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEE-TTC-HHHH-HHHTCCCSSE
T ss_pred cCcCCHHHHHHHhc-cCCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEec-Cch-HHHH-HHcCCCCCCe
Confidence 44456677777765 345678888888764 2245666666654 357776554 445 7999 9999999999
Q ss_pred EEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 399 ILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 399 l~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
+++|..+++ ........-....+..+|++
T Consensus 209 lvl~~~nGk-~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 209 CYLLLRNGS-VSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp EEEEETTSC-EEECCCSSCSHHHHHHHHTT
T ss_pred EEEEeCCCc-eeecccccccHHHHHHHHHH
Confidence 999987664 33333322334455566654
No 344
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=93.34 E-value=0.15 Score=44.31 Aligned_cols=91 Identities=9% Similarity=0.176 Sum_probs=60.5
Q ss_pred CCCcEEEEEe-CCCCHhHH-HHHHHHHHHHHHH-cCCCe-EEEEEEcCCC---------------------chHHHHHhC
Q 042284 337 REDPWLIVLY-APWCHFCQ-AMEGSYIELAEQL-EGMGV-KVGKFRADGD---------------------HKEFAKQKL 391 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~-~~~p~~~~la~~~-~~~~v-~~~~Vd~~~~---------------------~~~l~~~~~ 391 (430)
.++.++|+|| ..||+.|. ...+.|.+.+.++ +..++ .++.|.+|.. +.+++ +.|
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a-~~y 120 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFT-DSM 120 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHH-HHh
Confidence 3567777776 68999999 8899999999988 65456 3776665431 15677 788
Q ss_pred CCC------C-----CCEEEEEeCCCcceeecCC--C---------CCCHHHHHHHHHH
Q 042284 392 QLV------S-----FPTILFFPKHSAKPVKYPS--E---------KRDVDSLMAFVNA 428 (430)
Q Consensus 392 ~V~------~-----~Ptl~~~~~g~~~~~~~~g--g---------~~~~~~l~~~i~~ 428 (430)
++. + ....+++++|......... + ..+++++.++|++
T Consensus 121 Gv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 121 NMLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp TCEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CCceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 873 2 4566777766533222211 1 2568888888875
No 345
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=92.51 E-value=1.4 Score=38.64 Aligned_cols=30 Identities=27% Similarity=0.479 Sum_probs=26.4
Q ss_pred cEEEEEeCCCCHhHHHHHHHHHHHHHHHcC
Q 042284 340 PWLIVLYAPWCHFCQAMEGSYIELAEQLEG 369 (430)
Q Consensus 340 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~ 369 (430)
..|.+|+.+-||+|-...|.++++.+.+++
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~ 32 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPG 32 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCT
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCC
Confidence 357788899999999999999999999864
No 346
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=91.85 E-value=2.9 Score=32.40 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=65.0
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHc-CCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCH
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLE-GMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDV 419 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~-~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~ 419 (430)
....|.|..-+.++.....+.++.+.+. +..+.+-.||+.++ |.++ +.++|-.+||++-..+.- ..+..| .--.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eq-PeLA-E~~~IvATPTLIK~~P~P--~rriiG-d~i~ 87 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQ-PQLV-EYYRLVVTPALVKIGPGS--RQVLSG-IDLT 87 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTC-HHHH-HHTTCCSSSEEEEEESSS--CEEEES-SCHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccC-HHHH-hHcCeeeccHhhccCCCC--ceEEeC-hHHH
Confidence 5557888888899888888888877766 45788999999999 9999 999999999999877654 345555 4557
Q ss_pred HHHHHHHH
Q 042284 420 DSLMAFVN 427 (430)
Q Consensus 420 ~~l~~~i~ 427 (430)
++|..|.-
T Consensus 88 ~ql~~wwp 95 (105)
T 1t4y_A 88 DQLANQLP 95 (105)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhH
Confidence 77887764
No 347
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=91.28 E-value=0.37 Score=38.84 Aligned_cols=57 Identities=12% Similarity=0.070 Sum_probs=34.9
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchH----HHHHhC--------CCCCCCEEE
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE----FAKQKL--------QLVSFPTIL 400 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~----l~~~~~--------~V~~~Ptl~ 400 (430)
||+.|+++.|+.|+-...- ..+...+..++|.|-.+|++.+ ++ +. ++. +...+|.++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c-~~aK~lL~~kgV~feEidI~~d-~~~r~eM~-~~~~~~~~~~~G~~tvPQIF 69 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQ-QDVLGFLEANKIGFEEKDIAAN-EENRKWMR-ENVPENSRPATGYPLPPQIF 69 (121)
T ss_dssp CEEEEECTTCSCHHHHHHH-HHHHHHHHHTTCCEEEEECTTC-HHHHHHHH-HHSCGGGSCSSSSCCSCEEE
T ss_pred CEEEEecCCCCCccchHHH-HHHHHHHHHCCCceEEEECCCC-HHHHHHHH-HhccccccccCCCcCCCEEE
Confidence 4677889999999532221 1111223333689999999876 43 33 455 666788654
No 348
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=90.37 E-value=0.39 Score=38.55 Aligned_cols=66 Identities=17% Similarity=0.317 Sum_probs=41.3
Q ss_pred chHHHHHHhcCCCCcEEEEEe-----CCCCHhHHHHHHHHHHHHHHHcCCCe-EEEEEEcCCCchHHHH---HhCCCCCC
Q 042284 326 TGIENLARLQNREDPWLIVLY-----APWCHFCQAMEGSYIELAEQLEGMGV-KVGKFRADGDHKEFAK---QKLQLVSF 396 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fy-----a~wC~~C~~~~p~~~~la~~~~~~~v-~~~~Vd~~~~~~~l~~---~~~~V~~~ 396 (430)
+..+++++ ..+|+| |. +|.|++|++....|.+. ++ .|..+|++.+ +++.. +.-+-..+
T Consensus 11 e~i~~~i~----~~~Vvv-F~Kgt~~~P~C~fc~~ak~lL~~~-------gv~~~~~~~v~~~-~~~r~~l~~~sg~~Tv 77 (118)
T 2wul_A 11 EQLDALVK----KDKVVV-FLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTI 77 (118)
T ss_dssp HHHHHHHH----HSSEEE-EESBCSSSBSSHHHHHHHHHHHHT-------TCCSCEEEETTSC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHHHh----cCCEEE-EEcCCCCCCCCHHHHHHHHHHHHh-------CCcCeEeecccCC-HHHHHHHHHhccCCCC
Confidence 45666664 345555 43 36899999998777543 23 3677888877 55431 33356678
Q ss_pred CEEEEEeCCC
Q 042284 397 PTILFFPKHS 406 (430)
Q Consensus 397 Ptl~~~~~g~ 406 (430)
|.++ -+|+
T Consensus 78 PqIF--I~g~ 85 (118)
T 2wul_A 78 PQVY--LNGE 85 (118)
T ss_dssp CEEE--ETTE
T ss_pred CeEe--ECCE
Confidence 8864 4665
No 349
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=89.06 E-value=0.6 Score=40.40 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=32.4
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHH-cCCCeEEEEEE
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQL-EGMGVKVGKFR 378 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~-~~~~v~~~~Vd 378 (430)
..+.+||.|....||+|+.+.+.+.++.+++ .+ ++.|+.-+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g-~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGED-NVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTT-TEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-CEEEEEEE
Confidence 4567889999999999999999988877776 44 67776554
No 350
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=88.91 E-value=1.1 Score=35.75 Aligned_cols=33 Identities=6% Similarity=-0.031 Sum_probs=24.7
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG 381 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~ 381 (430)
++.|+.|+|+.|++....+++. ++.+-.+|+.+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~ 39 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-------GIDYTFHDYKK 39 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCcEEEEeeeC
Confidence 5568899999999998887763 35566677654
No 351
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=88.10 E-value=1 Score=38.66 Aligned_cols=41 Identities=15% Similarity=0.284 Sum_probs=31.5
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHH-HHHHHHHcC-CCeEEEEE
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSY-IELAEQLEG-MGVKVGKF 377 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~V 377 (430)
..+..|+.|+.+.|++|..+.+.+ ..+.+.|.+ .++.+...
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~ 52 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFV 52 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 457789999999999999999998 578777753 24665544
No 352
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=87.89 E-value=0.33 Score=41.74 Aligned_cols=44 Identities=9% Similarity=0.165 Sum_probs=34.3
Q ss_pred CCCcEEEEEe-CCCCHhHHHHHHHHHHHHHHHcCCCeE-EEEEEcC
Q 042284 337 REDPWLIVLY-APWCHFCQAMEGSYIELAEQLEGMGVK-VGKFRAD 380 (430)
Q Consensus 337 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~-~~~Vd~~ 380 (430)
.++.+|++|| ..||+.|....+.|.+.+.+++..++. ++.|.+|
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D 86 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN 86 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3567777777 579999999999999988888754574 7777655
No 353
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=87.87 E-value=0.24 Score=47.71 Aligned_cols=60 Identities=13% Similarity=0.151 Sum_probs=35.1
Q ss_pred EEEEeCCCCHhHHHHHH-HHHHHHHHHcCCCeEEEEEEcCCCc----hHHHHHhCCCCCCCEEEEEeCCC
Q 042284 342 LIVLYAPWCHFCQAMEG-SYIELAEQLEGMGVKVGKFRADGDH----KEFAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p-~~~~la~~~~~~~v~~~~Vd~~~~~----~~l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
++.|..+||++|++.+. .|++..-.+. .+.++.+|-...+ ..+. +..+...+|+++ -+|+
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~--eidVlEld~~~~~~e~~~~L~-~~tG~~TVPqVF--I~Gk 327 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRS--KVLVLQLNDMKEGADIQAALY-EINGQRTVPNIY--INGK 327 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTT--TEEEEEGGGSTTHHHHHHHHH-HHHCCCSSCEEE--ETTE
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcc--eEEEEEeccccCCHHHHHHHH-HHHCCCCcCEEE--ECCE
Confidence 34489999999999875 4555432222 2444443322221 2344 456888999874 3665
No 354
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=87.32 E-value=0.68 Score=40.75 Aligned_cols=43 Identities=9% Similarity=0.188 Sum_probs=33.5
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
...+ .+++|.++||++++.+|+. ...+.| ..+.+.|.++|+++
T Consensus 166 ~~~a-~~~gv~g~Pt~~i~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 166 FQRV-AQWGISGFPALVVESGTDR-YLITTG-YRPIEALRQLLDTW 208 (216)
T ss_dssp HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCcccceEEEEECCEE-EEeccC-CCCHHHHHHHHHHH
Confidence 5667 7899999999999988873 224445 68899999988764
No 355
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=86.22 E-value=1.5 Score=38.63 Aligned_cols=43 Identities=9% Similarity=-0.044 Sum_probs=31.6
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHH-HHHHc-CCCeEEEEEEc
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIEL-AEQLE-GMGVKVGKFRA 379 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~l-a~~~~-~~~v~~~~Vd~ 379 (430)
..+.+||.|....|++|+.+.+.+... .++|- ..++.++..+.
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 456789999999999999999877544 44772 23677776553
No 356
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=85.62 E-value=0.63 Score=43.04 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=25.9
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHH
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQ 366 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~ 366 (430)
.++.+++.|+-|.||+|+++.+.+++..+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 467899999999999999999999865554
No 357
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=81.46 E-value=1.3 Score=45.60 Aligned_cols=66 Identities=14% Similarity=0.286 Sum_probs=41.7
Q ss_pred chHHHHHHhcCCCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC--chH----HHHHhCCCCCCCEE
Q 042284 326 TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD--HKE----FAKQKLQLVSFPTI 399 (430)
Q Consensus 326 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~--~~~----l~~~~~~V~~~Ptl 399 (430)
+.+++++. .. . ++.|..+||++|+..+..|++. ++.+-.+|++.. .++ +. +..+...+|.+
T Consensus 9 ~~v~~~i~---~~-~-v~vy~~~~Cp~C~~~k~~L~~~-------~i~~~~~dv~~~~~~~~~~~~l~-~~~g~~tvP~v 75 (598)
T 2x8g_A 9 QWLRKTVD---SA-A-VILFSKTTCPYCKKVKDVLAEA-------KIKHATIELDQLSNGSAIQKCLA-SFSKIETVPQM 75 (598)
T ss_dssp HHHHHHHH---HC-S-EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHTH-HHHSCCCSCEE
T ss_pred HHHHHHhc---cC-C-EEEEECCCChhHHHHHHHHHHC-------CCCcEEEEcccCcchHHHHHHHH-HHhCCceeCEE
Confidence 44556554 33 3 4559999999999999888754 244555666542 122 33 34577899987
Q ss_pred EEEeCCC
Q 042284 400 LFFPKHS 406 (430)
Q Consensus 400 ~~~~~g~ 406 (430)
|-+|+
T Consensus 76 --~i~g~ 80 (598)
T 2x8g_A 76 --FVRGK 80 (598)
T ss_dssp --EETTE
T ss_pred --EECCE
Confidence 44665
No 358
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=80.79 E-value=2.7 Score=33.18 Aligned_cols=84 Identities=17% Similarity=0.285 Sum_probs=52.5
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC----Cc--------------hHHHHHhCCCCCCCEEE
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG----DH--------------KEFAKQKLQLVSFPTIL 400 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~----~~--------------~~l~~~~~~V~~~Ptl~ 400 (430)
|.++|.|..|.|+-|+.....+.+ +.+ ++.+.+||+-. +. ..+. +.++ ..+=.++
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~----led-eY~ilrVNIlSfFsK~g~v~~lg~~~~y~lInn~~-~~l~-ne~v~lf 74 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEE----LKS-EYDILHVDILSFFLKDGDSSMLGDVKRGTLIGNFA-AHLS-NYIVSIF 74 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHT----TTT-TEEEEEEECCCCCCCTTGGGC-----CCTHHHHHH-HHGG-GGCEEEE
T ss_pred CceEEEeCCCccHHHHHHHHHHHH----hhc-cccEEEEEeeeeeccCCceeeeeccchhhhHHHHH-Hhhc-ccEEEEE
Confidence 568999999999999998877744 444 57888888632 10 2344 4444 4555666
Q ss_pred EEeCCCcce--eec---------CCCCCCHHHHHHHHHHh
Q 042284 401 FFPKHSAKP--VKY---------PSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 401 ~~~~g~~~~--~~~---------~gg~~~~~~l~~~i~~~ 429 (430)
=|+++..+. +.+ .-...+.++|++-|++.
T Consensus 75 Kydp~s~qmA~V~i~k~~~la~id~~~v~~d~L~~~Ie~a 114 (124)
T 2g2q_A 75 KYNPQTKQMAFVDINKSLDFTKTDKSLVNLEILKSEIEKA 114 (124)
T ss_dssp EEETTTTEEEECCCGGGBCTTCCSGGGBCHHHHHHHHHHC
T ss_pred EEcCCCCcEEEEehhHeeeeeecchhhccHHHHHHHHHhC
Confidence 666554321 110 01246788888887753
No 359
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=75.37 E-value=3.3 Score=33.56 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=26.2
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD 382 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~ 382 (430)
++.|+.|+|+.|++....+++. ++.+-.+|++++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCceEEEEccCC
Confidence 5568899999999998887763 366667787764
No 360
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=72.85 E-value=3.2 Score=35.42 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=29.0
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
..++ ++++|.++||+++ +|+ . +.| ..+.+.|.++|+++
T Consensus 139 ~~~a-~~~gv~GtPt~vv--nG~--~--~~G-~~~~~~l~~~i~~~ 176 (186)
T 3bci_A 139 KKIA-KDNHIKTTPTAFI--NGE--K--VED-PYDYESYEKLLKDK 176 (186)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE--E--CSC-TTCHHHHHHHHHC-
T ss_pred HHHH-HHcCCCCCCeEEE--CCE--E--cCC-CCCHHHHHHHHHHH
Confidence 4667 7899999999987 665 2 335 68899999998754
No 361
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=72.53 E-value=7.7 Score=30.22 Aligned_cols=50 Identities=14% Similarity=0.252 Sum_probs=38.6
Q ss_pred CCeEEEEEEcCCCch----------HHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHH
Q 042284 370 MGVKVGKFRADGDHK----------EFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFV 426 (430)
Q Consensus 370 ~~v~~~~Vd~~~~~~----------~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i 426 (430)
.++.+.+.|...+ | ++. +++++..+|.+++ +|+ +...|..-+.++|.+|+
T Consensus 42 ~Gi~V~RyNL~~~-P~~F~~N~~V~~~L-~~~G~~~LP~~~V--DGe---vv~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 42 QGIIVTRHNLRDE-PQVYVSNKTVNDFL-QKHGADALPITLV--DGE---IAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp TTCCCEEEETTTC-TTHHHHSHHHHHHH-HTTCGGGCSEEEE--TTE---EEECSSCCCHHHHHHHH
T ss_pred CCCEEEEEccccC-hHHHhcCHHHHHHH-HHcCcccCCEEEE--CCE---EEEeccCCCHHHHHHHh
Confidence 4689999999887 4 556 6899999998765 776 44445467899999987
No 362
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=72.33 E-value=3.5 Score=35.42 Aligned_cols=41 Identities=20% Similarity=0.227 Sum_probs=30.3
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
...+ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+.+
T Consensus 142 ~~~a-~~~gv~GtPtfvv--ng~~-~v~~~G-a~~~e~~~~~i~~l 182 (185)
T 3feu_A 142 KMLS-EKSGISSVPTFVV--NGKY-NVLIGG-HDDPKQIADTIRYL 182 (185)
T ss_dssp HHHH-HHHTCCSSSEEEE--TTTE-EECGGG-CSSHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EEecCC-CCCHHHHHHHHHHH
Confidence 4566 7899999999987 6662 233345 57889998888765
No 363
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=69.70 E-value=5.4 Score=31.69 Aligned_cols=34 Identities=12% Similarity=0.216 Sum_probs=26.0
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD 382 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~ 382 (430)
+..|+.|+|+.|++....+++. ++.|-.+|+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH-------DVVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-------CCCeEEEecccC
Confidence 4568899999999998777642 467777888664
No 364
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=67.84 E-value=4.2 Score=31.96 Aligned_cols=34 Identities=9% Similarity=-0.075 Sum_probs=25.2
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD 382 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~ 382 (430)
++.|+.|+|+.|++....|++. ++.+-.+|+.++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~-------gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH-------KVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC-------CCceEEEeecCC
Confidence 4568899999999998877652 366667777543
No 365
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=65.31 E-value=7.7 Score=30.42 Aligned_cols=51 Identities=16% Similarity=0.295 Sum_probs=38.5
Q ss_pred CCeEEEEEEcCCCch----------HHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHH
Q 042284 370 MGVKVGKFRADGDHK----------EFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427 (430)
Q Consensus 370 ~~v~~~~Vd~~~~~~----------~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~ 427 (430)
+++.+.+.|...+ + ++. +++++..+|.+++ +|+ .+ ..|..-+.++|.+|+.
T Consensus 39 ~Gi~V~RyNL~~~-P~aF~~N~~V~~~L-~~~G~~~LP~~~V--DGe--vv-~~G~yPt~eEl~~~lg 99 (110)
T 3kgk_A 39 SGVQIERFNLAQQ-PMSFVQNEKVKAFI-EASGAEGLPLLLL--DGE--TV-MAGRYPKRAELARWFG 99 (110)
T ss_dssp HTCCEEEEETTTC-TTHHHHSHHHHHHH-HHHCGGGCCEEEE--TTE--EE-EESSCCCHHHHHHHHT
T ss_pred CCCeEEEEccccC-hHHHhcCHHHHHHH-HHcCcccCCEEEE--CCE--EE-EeccCCCHHHHHHHhC
Confidence 3589999999887 4 456 6789999998765 776 33 3344678999999873
No 366
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=64.99 E-value=8.8 Score=30.47 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=26.0
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD 382 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~ 382 (430)
+..|+.|+|+.|++....+++- ++.|-.+|+.++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 38 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL-------AWDYDAIDIKKN 38 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCceEEEEeccC
Confidence 5568899999999998777643 366777888665
No 367
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=64.52 E-value=2.4 Score=32.94 Aligned_cols=61 Identities=11% Similarity=-0.069 Sum_probs=48.9
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEE
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILF 401 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~ 401 (430)
+.++..|-+-.-+.++.....+.++.+.+-+..+.+=.||+.++ |.++ +.++|-.+||++-
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~-PelA-e~~~IvAtPTLiK 67 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKN-PQLA-EEDKILATPTLAK 67 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC-CSCC-TTCEEECHHHHGG
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccC-HhHH-hHCCeEEechhhh
Confidence 45666666667888888888888876665444889999999999 9999 8999999999763
No 368
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=64.15 E-value=3.3 Score=35.36 Aligned_cols=41 Identities=12% Similarity=0.212 Sum_probs=29.0
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
...+ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+++
T Consensus 152 ~~~a-~~~gv~gtPt~~i--ng~~-~~~~~g-~~~~~~l~~~i~~~ 192 (195)
T 3c7m_A 152 KASY-DVAKIQGVPAYVV--NGKY-LIYTKS-IKSIDAMADLIREL 192 (195)
T ss_dssp GGHH-HHHHHHCSSEEEE--TTTE-EECGGG-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EeccCC-CCCHHHHHHHHHHH
Confidence 4566 7889999999765 6762 222223 57899999998865
No 369
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=64.05 E-value=5.6 Score=34.14 Aligned_cols=36 Identities=14% Similarity=0.168 Sum_probs=27.1
Q ss_pred HHHHHhCCCCCCCEEEEEeCCCcceee-cCCCCCCHHHHHHHH
Q 042284 385 EFAKQKLQLVSFPTILFFPKHSAKPVK-YPSEKRDVDSLMAFV 426 (430)
Q Consensus 385 ~l~~~~~~V~~~Ptl~~~~~g~~~~~~-~~gg~~~~~~l~~~i 426 (430)
..+ ++++|.++||+++ +|+ ... ..| ..+.+++.++|
T Consensus 145 ~~a-~~~GV~gtPtf~i--ng~--~~~~~s~-~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYA-RQNGIHVSPTFMI--NGL--VQPGMSS-GDPVSKWVSDI 181 (182)
T ss_dssp HHH-HHHTCCSSSEEEE--TTE--ECTTCCT-TSCHHHHHHHH
T ss_pred HHH-HHCCCCccCEEEE--CCE--EccCCCC-CCCHHHHHHHh
Confidence 456 7889999999987 676 443 344 68899988876
No 370
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=60.21 E-value=12 Score=31.99 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=27.2
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
..++ ++++|.++||+++ +|+ ... |+. +.+.|.+.|+.+
T Consensus 144 ~~~a-~~~gv~gtPt~vv--ng~--~~~--~~~-~~e~l~~~i~~l 181 (193)
T 3hz8_A 144 QELT-ETFQIDGVPTVIV--GGK--YKV--EFA-DWESGMNTIDLL 181 (193)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT--EEE--CCS-SHHHHHHHHHHH
T ss_pred HHHH-HHhCCCcCCEEEE--CCE--EEe--cCC-CHHHHHHHHHHH
Confidence 4567 7999999999987 676 222 223 788888877654
No 371
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=54.15 E-value=12 Score=31.91 Aligned_cols=20 Identities=5% Similarity=0.242 Sum_probs=16.4
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCC
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
...+ ++++|.++||+++ +|+
T Consensus 135 ~~~a-~~~gv~GtPt~~v--ng~ 154 (189)
T 3l9v_A 135 ERLF-KEYGVRGTPSVYV--RGR 154 (189)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHhCCCccCEEEE--CCE
Confidence 4566 7899999999987 676
No 372
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=53.12 E-value=11 Score=33.00 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=26.7
Q ss_pred HhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 389 QKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 389 ~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
++++|.++||+++ +|+ . +.| ..+.+.|.+.|++.
T Consensus 162 ~~~GV~GtPtfvv--ng~--~--~~G-~~~~e~l~~~i~~~ 195 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI--L--LAG-THDWASLRPQILAR 195 (205)
T ss_dssp HHHCCCSSSEEEE--TTE--E--CTT-CCSHHHHHHHHHHH
T ss_pred HHcCCccCCEEEE--CCE--E--EeC-CCCHHHHHHHHHHH
Confidence 4689999999987 665 2 445 68999999998764
No 373
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=53.12 E-value=16 Score=32.67 Aligned_cols=39 Identities=8% Similarity=0.135 Sum_probs=28.8
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
...+ .+++|.++||+++ +|+ ..+.| ..+.+.|.+.|+++
T Consensus 173 ~~~a-~~~Gv~GvPtfvv--~g~---~~v~G-a~~~e~~~~~i~~~ 211 (239)
T 3gl5_A 173 EREA-AQLGATGVPFFVL--DRA---YGVSG-AQPAEVFTQALTQA 211 (239)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT---EEEES-SCCHHHHHHHHHHH
T ss_pred HHHH-HHCCCCeeCeEEE--CCc---EeecC-CCCHHHHHHHHHHH
Confidence 3456 6899999999987 665 22345 57899999988764
No 374
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=52.75 E-value=25 Score=30.23 Aligned_cols=38 Identities=16% Similarity=0.343 Sum_probs=28.6
Q ss_pred CcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEE
Q 042284 339 DPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKF 377 (430)
Q Consensus 339 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~V 377 (430)
...|..|+...||+|....+.++++.+.... ++.+...
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~-~v~v~~~ 44 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQEYSA-FLTVKIM 44 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHhcCCC-CeEEEEe
Confidence 3567888899999999999999999884332 4555544
No 375
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=50.95 E-value=37 Score=34.04 Aligned_cols=77 Identities=14% Similarity=0.105 Sum_probs=52.1
Q ss_pred CCCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCC
Q 042284 337 REDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEK 416 (430)
Q Consensus 337 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~ 416 (430)
-.++|.+.++.+-|..|..+...++++++. .+ ++.+.. + + . .. ...|++.+..+|+...+.|.| -
T Consensus 17 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~-~i~~~~-~-~-~------~~---~~~p~~~~~~~~~~~~i~f~g-~ 81 (521)
T 1hyu_A 17 LTKPVELIATLDDSAKSAEIKELLAEIAEL-SD-KVTFKE-D-N-T------LP---VRKPSFLITNPGSQQGPRFAG-S 81 (521)
T ss_dssp CCSCEEEEEECCSSHHHHHHHHHHHHHHTT-CT-TEEEEE-C-T-T------SS---SCSSEEEEECTTCCCSCEEES-C
T ss_pred CCCCEEEEEEeCCCcchHHHHHHHHHHHHh-CC-ceEEEE-c-C-C------cc---cCCCEEEEecCCCcceEEEec-c
Confidence 467888888888899999999999998654 44 566532 1 1 1 11 468999999887655677766 2
Q ss_pred CCHHHHHHHHHH
Q 042284 417 RDVDSLMAFVNA 428 (430)
Q Consensus 417 ~~~~~l~~~i~~ 428 (430)
-.=.+|..||..
T Consensus 82 p~g~e~~s~~~~ 93 (521)
T 1hyu_A 82 PLGHEFTSLVLA 93 (521)
T ss_dssp CCGGGHHHHHHH
T ss_pred CcchhHHHHHHH
Confidence 333455555543
No 376
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=49.01 E-value=11 Score=29.81 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=25.6
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD 382 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~ 382 (430)
+..|+.|+|+.|++....+++- ++.|-.+|+.++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 39 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN-------NIEYTNRLIVDD 39 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTT
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCceEEEecccC
Confidence 4568899999999988776642 366777787665
No 377
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=47.29 E-value=14 Score=31.78 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=28.3
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHHh
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~~ 429 (430)
...+ .+++|.++||+++ +|+ .+.| ....+.|.+.|++.
T Consensus 157 ~~~a-~~~Gv~G~Ptfvi--~g~----~~~G-~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 157 THAA-IERKVFGVPTMFL--GDE----MWWG-NDRLFMLESAMGRL 194 (203)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHHH
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEEC-CCCHHHHHHHHhcc
Confidence 4566 7899999999887 554 2345 57788888888754
No 378
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=44.67 E-value=11 Score=28.72 Aligned_cols=21 Identities=5% Similarity=0.079 Sum_probs=19.0
Q ss_pred EecccccchHHHHHHHHHcCC
Q 042284 215 WNPLANVKGQDIWNFLRAMNI 235 (430)
Q Consensus 215 ~~Pi~dWt~~dVw~yi~~~~l 235 (430)
-.|+..|+.+||-.|++..|+
T Consensus 14 ~~~v~~Ws~edV~~WL~~~Gl 34 (97)
T 2d8c_A 14 MKEVVYWSPKKVADWLLENAM 34 (97)
T ss_dssp CSCCSSCCTTHHHHHHHHTTC
T ss_pred CCchhhCCHHHHHHHHHHcCC
Confidence 468899999999999999886
No 379
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=44.37 E-value=13 Score=32.19 Aligned_cols=20 Identities=20% Similarity=0.370 Sum_probs=15.9
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCC
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
...+ +.++|.++|++++ +|+
T Consensus 40 ~~~a-~~~gi~gvP~fvi--ngk 59 (197)
T 1un2_A 40 EKAA-ADVQLRGVPAMFV--NGK 59 (197)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHcCCCcCCEEEE--cce
Confidence 4566 7999999999976 665
No 380
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=43.62 E-value=14 Score=30.30 Aligned_cols=78 Identities=10% Similarity=0.061 Sum_probs=42.1
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCc---hHHHHHhCCCCCCCEEEEEeCCCcceee--cCCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDH---KEFAKQKLQLVSFPTILFFPKHSAKPVK--YPSEK 416 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~---~~l~~~~~~V~~~Ptl~~~~~g~~~~~~--~~gg~ 416 (430)
+..|+.|+|+.|++....|++- ++.|-.+|+.++. .++. +-++-.++|.--++......... .....
T Consensus 4 itiY~~p~C~~crkak~~L~~~-------gi~~~~idi~~~~~~~~eL~-~~~~~~g~p~~~l~n~~~~~yk~l~l~~~~ 75 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS-------GTEPTIILYLENPPSRDELV-KLIADMGISVRALLRKNVEPYEQLGLAEDK 75 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-------TCCCEEECTTTSCCCHHHHH-HHHHHHTSCHHHHBCSSSHHHHHTTTTSSC
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCCEEEEECCCCCccHHHHH-HHhcccCCCHHHhccCCchhHHhcCCcccc
Confidence 3457899999999988777652 3667778877641 2222 22233455644444433321111 11112
Q ss_pred CCHHHHHHHHH
Q 042284 417 RDVDSLMAFVN 427 (430)
Q Consensus 417 ~~~~~l~~~i~ 427 (430)
.+.+++.+.+.
T Consensus 76 ls~~~~~~lm~ 86 (141)
T 1s3c_A 76 FTDDQLIDFML 86 (141)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 46666666554
No 381
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=42.74 E-value=6.5 Score=28.15 Aligned_cols=21 Identities=10% Similarity=0.183 Sum_probs=18.7
Q ss_pred ecccccchHHHHHHHHHcCCC
Q 042284 216 NPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 216 ~Pi~dWt~~dVw~yi~~~~lp 236 (430)
.|+.+|+.+||-.++...|++
T Consensus 2 ~~v~~Ws~~~V~~WL~~~gl~ 22 (74)
T 2gle_A 2 HMVHEWSVQQVSHWLVGLSLD 22 (74)
T ss_dssp CCGGGCCSGGGHHHHHHTTTH
T ss_pred CCcccCCHHHHHHHHHHCCCH
Confidence 389999999999999999863
No 382
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=42.12 E-value=13 Score=29.60 Aligned_cols=34 Identities=9% Similarity=0.056 Sum_probs=25.4
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGD 382 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~ 382 (430)
+..|+.|+|+.|++....+++ .++.|-.+|+.++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~ 40 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLET 40 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTS
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccC
Confidence 456889999999998876653 2466777888765
No 383
>2lic_A Vitellogenin; lipid transport; HET: SEP; NMR {Apis mellifera}
Probab=40.45 E-value=6.9 Score=22.63 Aligned_cols=20 Identities=35% Similarity=0.338 Sum_probs=15.4
Q ss_pred hcCCCccccceeEEEecCCC
Q 042284 14 LNGSGSISSSFAVCYYGPHH 33 (430)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~ 33 (430)
+.++.|+||+..+.+.+|..
T Consensus 15 stssssissseendfwqpkp 34 (35)
T 2lic_A 15 STSSSSISSSEENDFWQPKP 34 (35)
T ss_dssp CSCSSCCSTTCSCSSCCCCC
T ss_pred ccccccccccccccccCCCC
Confidence 45677899999888888753
No 384
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=40.35 E-value=17 Score=28.71 Aligned_cols=33 Identities=9% Similarity=0.160 Sum_probs=23.8
Q ss_pred EEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCC
Q 042284 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADG 381 (430)
Q Consensus 342 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~ 381 (430)
+..|+.|+|+.|++....+++ + ++.|-.+|+.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-----~--gi~~~~~di~~ 38 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-----Q--GIAPQVIKYLE 38 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-----T--TCCCEEECHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-----c--CCceEEEEecc
Confidence 456789999999999887764 2 35566666654
No 385
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=36.84 E-value=24 Score=30.40 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=27.5
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
...+ .+++|.++||+++ +|+ .+.| ....+.|.++|.+
T Consensus 163 ~~~a-~~~Gv~GvPtfvv--~g~----~~~G-~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 163 GEDA-VARGIFGSPFFLV--DDE----PFWG-WDRMEMMAEWIRT 199 (202)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHT
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEec-CCCHHHHHHHHhc
Confidence 4556 6889999999987 554 3445 5778888888864
No 386
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=36.50 E-value=12 Score=27.02 Aligned_cols=18 Identities=11% Similarity=0.121 Sum_probs=16.5
Q ss_pred ecccccchHHHHHHHHHc
Q 042284 216 NPLANVKGQDIWNFLRAM 233 (430)
Q Consensus 216 ~Pi~dWt~~dVw~yi~~~ 233 (430)
.|+..||.+||-.++...
T Consensus 1 k~v~~Wt~~~V~~WL~~~ 18 (78)
T 3bs7_A 1 KAVYLWTVSDVLKWYRRH 18 (78)
T ss_dssp CCGGGCCHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHH
Confidence 389999999999999996
No 387
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=34.38 E-value=19 Score=26.22 Aligned_cols=22 Identities=9% Similarity=0.181 Sum_probs=19.2
Q ss_pred EecccccchHHHHHHHHHcCCC
Q 042284 215 WNPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 215 ~~Pi~dWt~~dVw~yi~~~~lp 236 (430)
-.|+..|+.+||-.++...|++
T Consensus 4 ~~~v~~Ws~~~V~~WL~~lgl~ 25 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHLSLC 25 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHTTCG
T ss_pred CCChhhCCHHHHHHHHHHCCCH
Confidence 4589999999999999999874
No 388
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=33.24 E-value=38 Score=29.98 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=29.2
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
...+ .+++|.++||+++=.+|+ ...+.| ....+.|.++|.+
T Consensus 172 ~~~a-~~~Gv~GvPtfvv~~~g~--~~~f~G-~drl~~l~~~L~~ 212 (234)
T 3rpp_A 172 TEAA-CRYGAFGLPITVAHVDGQ--THMLFG-SDRMELLAHLLGE 212 (234)
T ss_dssp HHHH-HHTTCSSSCEEEEEETTE--EEEEES-SSCHHHHHHHHTC
T ss_pred HHHH-HHcCCCCCCEEEEeCCCC--cCceeC-ccCHHHHHHHhcc
Confidence 4556 688999999997722564 345656 5778888888753
No 389
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=33.02 E-value=1.4e+02 Score=25.22 Aligned_cols=59 Identities=8% Similarity=0.111 Sum_probs=38.7
Q ss_pred cEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCC
Q 042284 340 PWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHS 406 (430)
Q Consensus 340 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~ 406 (430)
+.+..|+.++|+.|....=.++.. +-.+.+..||.....+++. +......+|++. .+|.
T Consensus 5 ~~~~Ly~~~~sp~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~--~~g~ 63 (216)
T 3lyk_A 5 SVMTLFSNKDDIYCHQVKIVLAEK-----GVLYENAEVDLQALPEDLM-ELNPYGTVPTLV--DRDL 63 (216)
T ss_dssp -CEEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE--ETTE
T ss_pred ceEEEEeCCCChhHHHHHHHHHHc-----CCCcEEEeCCcccCcHHHH-hhCCCCCcCeEE--ECCe
Confidence 346778999999999977544433 2245666777654435666 556667899986 4553
No 390
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=33.01 E-value=19 Score=26.88 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=17.6
Q ss_pred ecccccchHHHHHHHHHc-CC
Q 042284 216 NPLANVKGQDIWNFLRAM-NI 235 (430)
Q Consensus 216 ~Pi~dWt~~dVw~yi~~~-~l 235 (430)
.|+..|+.+||-.|+... |+
T Consensus 12 ~~v~~Ws~edV~~wL~~l~gl 32 (89)
T 1kw4_A 12 PPISSWSVDDVSNFIRELPGC 32 (89)
T ss_dssp CCGGGCCHHHHHHHHHTSTTC
T ss_pred CCchhCCHHHHHHHHHHCcCh
Confidence 389999999999999987 54
No 391
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=31.76 E-value=1.2e+02 Score=27.09 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=29.2
Q ss_pred HHHHHHHHHHcCCcEEEEechhHHHHHH--HHHHh-cC---CCcEEEEecCCC
Q 042284 62 LEIMDKAFQKFGNDIAIAFSGAEDVVLI--EYAKL-TG---RPFRVFSLDTGR 108 (430)
Q Consensus 62 ~~~i~~~~~~~~~~i~vs~SGGKDS~vl--~l~~~-~~---~~i~vi~~DTg~ 108 (430)
.+.|+.++++-+. +.+++|||.--.-+ .|+.. .. ..+.++++|.=+
T Consensus 28 ~~~i~~a~~~~~~-~~l~LsgGstP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (251)
T 3tx2_A 28 ASAITGALAERGK-AMIVLTGGGTGIALLKHLRDVASGLDWTNVHVFWGDDRY 79 (251)
T ss_dssp HHHHHHHHHHHSC-EEEEECCSHHHHHHHHHHHHHHTTSCGGGEEEEESEEES
T ss_pred HHHHHHHHHhCCC-EEEEECCCchHHHHHHHHHhhccCCCCceeEEEeeeecc
Confidence 4456666666554 89999999754333 45543 22 347788888754
No 392
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=31.29 E-value=1.5e+02 Score=26.96 Aligned_cols=74 Identities=14% Similarity=0.142 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHc-CCcEEEEechhHH--HHHHHHHHhcCCCcEEEEec-CCC--CCHHHHHHHHHHHH---HhCCcE--E
Q 042284 61 PLEIMDKAFQKF-GNDIAIAFSGAED--VVLIEYAKLTGRPFRVFSLD-TGR--LNPETHQFFDTVEK---HYGIRI--E 129 (430)
Q Consensus 61 ~~~~i~~~~~~~-~~~i~vs~SGGKD--S~vl~l~~~~~~~i~vi~~D-Tg~--~fpet~~~~~~~~~---~~gl~i--~ 129 (430)
--+.++.+++.+ |..++-+.||++| --++.++.+.+..+.+.+.| .|. ...+..+++++..+ ++|++- .
T Consensus 87 ~~~v~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~I 166 (271)
T 2yci_X 87 NPDAIEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTEL 166 (271)
T ss_dssp CHHHHHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CHHHHHHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccE
Confidence 356888888886 4558888999988 56777888888877778776 343 23555666555443 458863 3
Q ss_pred EEccC
Q 042284 130 YTFPN 134 (430)
Q Consensus 130 ~~~p~ 134 (430)
++.|-
T Consensus 167 ilDPg 171 (271)
T 2yci_X 167 YIDPL 171 (271)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 55554
No 393
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=30.32 E-value=44 Score=29.13 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=28.1
Q ss_pred hHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 384 KEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 384 ~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
.+.+ .+++|.++||+++=.+|+ ...+.| ....+.|.++|.+
T Consensus 172 ~~~a-~~~gv~G~Ptfvv~~~g~--~~~~~G-~~~~~~l~~~l~~ 212 (226)
T 1r4w_A 172 TGAA-CKYGAFGLPTTVAHVDGK--TYMLFG-SDRMELLAYLLGE 212 (226)
T ss_dssp HHHH-HHTTCCSSCEEEEEETTE--EEEEES-TTCHHHHHHHHTC
T ss_pred HHHH-HHCCCCCCCEEEEeCCCC--cCceeC-CCcHHHHHHHhcC
Confidence 4556 789999999997643432 234445 5778888888753
No 394
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=28.41 E-value=77 Score=26.89 Aligned_cols=35 Identities=9% Similarity=0.056 Sum_probs=27.7
Q ss_pred EEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEE
Q 042284 341 WLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGK 376 (430)
Q Consensus 341 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~ 376 (430)
.|..|+-.-||.|....+.++++.+.++- .+.+--
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~~-~v~~~p 36 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYGL-TIRYNA 36 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCC-eEEEEe
Confidence 36778889999999999999999999853 344433
No 395
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=27.74 E-value=1.3e+02 Score=25.91 Aligned_cols=105 Identities=9% Similarity=-0.056 Sum_probs=56.7
Q ss_pred EEEEe-chhHHHHHHHHHHhcCCCcEEEEecCCCC---CHHHHHHHHHHHHHhCCcEEEEc---cCchHHHHHHHhcCCC
Q 042284 76 IAIAF-SGAEDVVLIEYAKLTGRPFRVFSLDTGRL---NPETHQFFDTVEKHYGIRIEYTF---PNAVEVQALVRTKGLF 148 (430)
Q Consensus 76 i~vs~-SGGKDS~vl~l~~~~~~~i~vi~~DTg~~---fpet~~~~~~~~~~~gl~i~~~~---p~~~~~~~~~~~~g~~ 148 (430)
+.+++ +-+-...+.+.+.+. ..-.+.|++|+.. +.+-.+-+.+..+++|.++..+. .......+.+.....-
T Consensus 5 l~l~s~~~~~~~~~~~f~~~~-~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I 83 (206)
T 3l4e_A 5 LFLTSSFKDVVPLFTEFESNL-QGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFI 83 (206)
T ss_dssp EEEESCGGGCHHHHHHHSCCC-TTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEE
T ss_pred eEEeecccchHHHHHHHHHHc-CCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEE
Confidence 44443 333333444444222 2367899998764 34555556667778899887663 2333333333333222
Q ss_pred CCCccchhhhhhhhchHHHHHHHhcC---ceEEEee
Q 042284 149 SFYEDGHQECCRIRKVRPLKRALKGL---RAWITGQ 181 (430)
Q Consensus 149 ~~~~~~~~~cc~~~K~~pl~~~~~~~---~~~i~G~ 181 (430)
.++.-+...+...++...+.+.+++. ...+.|+
T Consensus 84 ~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~ 119 (206)
T 3l4e_A 84 YVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGE 119 (206)
T ss_dssp EECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEE
T ss_pred EECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEE
Confidence 22333455677777776666666532 3556665
No 396
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=27.51 E-value=1.9e+02 Score=24.91 Aligned_cols=61 Identities=11% Similarity=0.108 Sum_probs=40.3
Q ss_pred CCcEEEEEeCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCC-CCCCEEEEEeCCC
Q 042284 338 EDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQL-VSFPTILFFPKHS 406 (430)
Q Consensus 338 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V-~~~Ptl~~~~~g~ 406 (430)
.+..+..|+.+.|+.|....-.++.. +-.+.+..||.....+++. +..-. ..+|++. .+|.
T Consensus 9 ~~~~~~Ly~~~~sp~~~~vr~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~nP~~g~vPvL~--~~g~ 70 (231)
T 4dej_A 9 KRSVMTLYSGKDDLKSHQVRLVLAEK-----GVGVEITYVTDESTPEDLL-QLNPYPEAKPTLV--DREL 70 (231)
T ss_dssp CCSSCEEEECSSCHHHHHHHHHHHHH-----TCBCEEEECCSSCCCHHHH-HHCCSSSCCSEEE--ETTE
T ss_pred CCceEEEEcCCCChHHHHHHHHHHHc-----CCCcEEEEcCcccCCHHHH-HhCCCCCCCCEEE--ECCE
Confidence 45567778999999999877555443 2135666677654435666 55566 6899987 4543
No 397
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=26.52 E-value=28 Score=26.00 Aligned_cols=24 Identities=8% Similarity=0.188 Sum_probs=20.5
Q ss_pred eEEEecccccchHHHHHHHHHcCC
Q 042284 212 LVKWNPLANVKGQDIWNFLRAMNI 235 (430)
Q Consensus 212 ~~~~~Pi~dWt~~dVw~yi~~~~l 235 (430)
.+...|+..|+.+||-.++...|+
T Consensus 11 ~~~~~~v~~Wt~~dV~~WL~~~gl 34 (91)
T 1v85_A 11 LLVHKAVDKWTTEEVVLWLEQLGP 34 (91)
T ss_dssp HHHHSCGGGCCHHHHHHHHHHHCG
T ss_pred cCCCCCcccCCHHHHHHHHHHcCC
Confidence 344568999999999999999987
No 398
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.30 E-value=31 Score=26.38 Aligned_cols=22 Identities=14% Similarity=0.161 Sum_probs=19.9
Q ss_pred EecccccchHHHHHHHHHcCCC
Q 042284 215 WNPLANVKGQDIWNFLRAMNIP 236 (430)
Q Consensus 215 ~~Pi~dWt~~dVw~yi~~~~lp 236 (430)
-.|+..|+.+||-.|+...|+.
T Consensus 24 ~~~v~~Ws~~~V~~WL~~lgl~ 45 (103)
T 2e8o_A 24 HPDYKTWGPEQVCSFLRRGGFE 45 (103)
T ss_dssp CSCGGGCHHHHHHHHHHHHTCC
T ss_pred ccChhhCCHHHHHHHHHHcCCC
Confidence 4688999999999999999985
No 399
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=24.33 E-value=1.8e+02 Score=25.92 Aligned_cols=45 Identities=11% Similarity=0.191 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCcEEEEechhHHHHHH--HHHHhc----CCCcEEEEecCC
Q 042284 62 LEIMDKAFQKFGNDIAIAFSGAEDVVLI--EYAKLT----GRPFRVFSLDTG 107 (430)
Q Consensus 62 ~~~i~~~~~~~~~~i~vs~SGGKDS~vl--~l~~~~----~~~i~vi~~DTg 107 (430)
.+.|+.++++-+. +.+++|||..-.-+ .|+... -..+.++++|.=
T Consensus 28 ~~~i~~~~~~~~~-~~l~LsgGstP~~~y~~L~~~~~~idw~~v~~f~~DEr 78 (248)
T 3oc6_A 28 VDAISSAIGERGQ-ATIVLTGGGTGIGLLKRVRERSGEIDWSKVHIYWGDER 78 (248)
T ss_dssp HHHHHHHHHHHSC-EEEEECCSHHHHHHHHHHHHTGGGSCGGGEEEEESEEE
T ss_pred HHHHHHHHHhCCC-EEEEECCCccHHHHHHHHHhhccCCCcceEEEEEeeec
Confidence 4456666666554 89999999764333 455421 135788998864
No 400
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=22.80 E-value=2.5e+02 Score=24.28 Aligned_cols=67 Identities=16% Similarity=0.196 Sum_probs=34.8
Q ss_pred eCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHH
Q 042284 346 YAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAF 425 (430)
Q Consensus 346 ya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~ 425 (430)
+.++|+.|+...-.++.. +-.+....||.....+.+. +..-...+|++. .+|. .. .+...|..+
T Consensus 26 ~~~~sp~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~g~vP~L~--~~g~---~l-----~ES~aI~~Y 89 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWLK-----GVKFNVTTVDMTRKPEELK-DLAPGTNPPFLV--YNKE---LK-----TDFIKIEEF 89 (247)
T ss_dssp SBCSCHHHHHHHHHHHHH-----TCCCEEEEECCC-----------CCSSSCEEE--ETTE---EE-----CCHHHHHHH
T ss_pred cCCCChhHHHHHHHHHHc-----CCCcEEEEcCcccchHHHH-HhCCCCCCCEEE--ECCE---ec-----cCHHHHHHH
Confidence 688999999887655543 2135566666543213444 334456899886 4443 11 234556666
Q ss_pred HHH
Q 042284 426 VNA 428 (430)
Q Consensus 426 i~~ 428 (430)
|.+
T Consensus 90 L~~ 92 (247)
T 2r4v_A 90 LEQ 92 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 401
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=22.77 E-value=2.7e+02 Score=21.53 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=21.5
Q ss_pred CcEEEEechhHHHH-HH----HHHHhcCCCcEEEEecC
Q 042284 74 NDIAIAFSGAEDVV-LI----EYAKLTGRPFRVFSLDT 106 (430)
Q Consensus 74 ~~i~vs~SGGKDS~-vl----~l~~~~~~~i~vi~~DT 106 (430)
++|+|++.|...|. ++ .++...+..+.++|+-.
T Consensus 7 ~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~ 44 (150)
T 3tnj_A 7 HHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLD 44 (150)
T ss_dssp SEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEEEEEC
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEEc
Confidence 35889988776662 22 45555567777777644
No 402
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=22.29 E-value=93 Score=24.92 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=23.7
Q ss_pred CCCEEEEEeCCCcceeecCCCCCCHHHHHHHHHH
Q 042284 395 SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNA 428 (430)
Q Consensus 395 ~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~i~~ 428 (430)
.-|++++|+..++......-...+.++|.+||++
T Consensus 55 a~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 55 ADPELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp CCCEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CCCEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 5689999965544333333335899999999975
No 403
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=22.15 E-value=3.8e+02 Score=25.43 Aligned_cols=71 Identities=13% Similarity=0.192 Sum_probs=43.6
Q ss_pred HHHHHHHHHH-HcCCcEEEEechhHHHHHHHHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEEEEcc
Q 042284 61 PLEIMDKAFQ-KFGNDIAIAFSGAEDVVLIEYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFP 133 (430)
Q Consensus 61 ~~~~i~~~~~-~~~~~i~vs~SGGKDS~vl~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~~~~p 133 (430)
..+.++..+. .++..-++.+++|..+..+.+.....+.-.|+..+. .|+.+...++.+.+++|.+++.+..
T Consensus 82 ~~~~l~~~la~~~g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~--~y~~~~~~~~~~~~~~g~~~~~v~~ 153 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALLGAGDRLVAARS--LFGSCFVVCSEILPRWGVQTVFVDG 153 (414)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESC--CCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCC--ccchHHHHHHHHHHHcCcEEEEeCC
Confidence 3444554444 345345577788876643322222344445665544 4888989888888999998877644
No 404
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.43 E-value=2.3e+02 Score=25.43 Aligned_cols=73 Identities=14% Similarity=0.240 Sum_probs=47.6
Q ss_pred HHHHHHHHHHc-CCcEEEEechhHHH--HHHHHHHhcCCCcEEEEec-CCC--CCHHHHHHHHHH---HHHhCCcE--EE
Q 042284 62 LEIMDKAFQKF-GNDIAIAFSGAEDV--VLIEYAKLTGRPFRVFSLD-TGR--LNPETHQFFDTV---EKHYGIRI--EY 130 (430)
Q Consensus 62 ~~~i~~~~~~~-~~~i~vs~SGGKDS--~vl~l~~~~~~~i~vi~~D-Tg~--~fpet~~~~~~~---~~~~gl~i--~~ 130 (430)
-+.++.+++.+ |..++-+.||+.|. -++.++.+.+..+.+.+.| .|. ...+..++.++. +.+.|++- .+
T Consensus 79 ~~v~~aAl~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~Ii 158 (262)
T 1f6y_A 79 IKAIEAGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLY 158 (262)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEE
Confidence 46888888886 45578889998887 6778888888777777765 343 234444554443 34568852 34
Q ss_pred EccC
Q 042284 131 TFPN 134 (430)
Q Consensus 131 ~~p~ 134 (430)
+-|-
T Consensus 159 lDPg 162 (262)
T 1f6y_A 159 IDPL 162 (262)
T ss_dssp EECC
T ss_pred EeCC
Confidence 5554
No 405
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=20.33 E-value=35 Score=26.35 Aligned_cols=23 Identities=9% Similarity=0.065 Sum_probs=18.8
Q ss_pred EEEecccccchHHHHHHHHHc--CC
Q 042284 213 VKWNPLANVKGQDIWNFLRAM--NI 235 (430)
Q Consensus 213 ~~~~Pi~dWt~~dVw~yi~~~--~l 235 (430)
....|+..|+.+||-.|+... |+
T Consensus 18 ~~~~~v~~Wt~~~V~~WL~~~~~gl 42 (106)
T 3bs5_A 18 TRPKAVYLWTVSDVLKWYRRHCGEY 42 (106)
T ss_dssp --CCCGGGCCHHHHHHHHHHHSGGG
T ss_pred CCCCCcccCCHHHHHHHHHHHHcch
Confidence 455689999999999999998 64
No 406
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=20.20 E-value=48 Score=23.80 Aligned_cols=19 Identities=5% Similarity=0.466 Sum_probs=16.6
Q ss_pred ecccccchHHHHHHHHHcC
Q 042284 216 NPLANVKGQDIWNFLRAMN 234 (430)
Q Consensus 216 ~Pi~dWt~~dVw~yi~~~~ 234 (430)
.|+..|+.+||-.++...+
T Consensus 2 ~~v~~Ws~~~V~~WL~~l~ 20 (80)
T 3bs5_B 2 EPVSKWSPSQVVDWMKGLD 20 (80)
T ss_dssp CCGGGCCHHHHHHHHHTSC
T ss_pred CccccCCHHHHHHHHHHHh
Confidence 4899999999999999653
No 407
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=20.16 E-value=4.5e+02 Score=23.14 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=34.9
Q ss_pred CcEEEEechhHHHH-HH----HHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHHHhCCcEE
Q 042284 74 NDIAIAFSGAEDVV-LI----EYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIE 129 (430)
Q Consensus 74 ~~i~vs~SGGKDS~-vl----~l~~~~~~~i~vi~~DTg~~fpet~~~~~~~~~~~gl~i~ 129 (430)
++|+|++.|...|. ++ .++...+..+.++++.....-.+.++-+.+..+..|+++.
T Consensus 171 ~~Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~ 231 (294)
T 3loq_A 171 DRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVH 231 (294)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEE
Confidence 46889988877763 22 3455556678888887655434444444445555677754
No 408
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=20.04 E-value=4.1e+02 Score=23.35 Aligned_cols=67 Identities=18% Similarity=0.146 Sum_probs=40.2
Q ss_pred eCCCCHhHHHHHHHHHHHHHHHcCCCeEEEEEEcCCCchHHHHHhCCCCCCCEEEEEeCCCcceeecCCCCCCHHHHHHH
Q 042284 346 YAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAF 425 (430)
Q Consensus 346 ya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Vd~~~~~~~l~~~~~~V~~~Ptl~~~~~g~~~~~~~~gg~~~~~~l~~~ 425 (430)
+.++|+.|+...-.++.. +-.+....||.....+.+. +..-...+|++. .+|. .. .....|..+
T Consensus 31 ~~~~~p~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~gkVPvL~--~~g~---~l-----~ES~aI~~Y 94 (267)
T 2ahe_A 31 SIGNCPFSQRLFMILWLK-----GVVFSVTTVDLKRKPADLQ-NLAPGTHPPFIT--FNSE---VK-----TDVNKIEEF 94 (267)
T ss_dssp SBCSCHHHHHHHHHHHHH-----TCCCEEEEECTTSCCHHHH-HHSTTCCSCEEE--ETTE---EE-----CCHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHc-----CCCCEEEEeCcccChHHHH-HhCCCCCCCEEE--ECCE---Ee-----cCHHHHHHH
Confidence 578999999877555542 2135666777654324565 555567899886 3443 11 234566666
Q ss_pred HHH
Q 042284 426 VNA 428 (430)
Q Consensus 426 i~~ 428 (430)
|.+
T Consensus 95 L~~ 97 (267)
T 2ahe_A 95 LEE 97 (267)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
Done!