RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 042284
(430 letters)
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase
{Escherichia coli [TaxId: 562]}
Length = 215
Score = 159 bits (404), Expect = 2e-47
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 14/204 (6%)
Query: 50 EKLARGMESASPLEIMDKAFQKFGNDIAIAFS-GAEDVVLIEYAKLTGRPFRVFSLDTGR 108
+ +E + A + ++ S G + V + V DTG
Sbjct: 21 AETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGY 80
Query: 109 LNPETHQFFDTVEKHYGIRIEYTFPNAVEVQALVRTKGLFSFYEDGHQECCRIRKVRPLK 168
L PET++F D + + ++ R L+ +G ++ I KV P+
Sbjct: 81 LFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMN 140
Query: 169 RALKGLRA--WITGQRKDQSPGTRAEIPVVQIDTSFEGIDGGKGSLVKWNPLANVKGQDI 226
RALK L A W G R++QS +RA +PV+ I + K P+ + + I
Sbjct: 141 RALKELNAQTWFAGLRREQSG-SRANLPVLAIQ----------RGVFKVLPIIDWDNRTI 189
Query: 227 WNFLRAMNIPINSLHSQGYISIGC 250
+ +L+ + + L +GY+S+G
Sbjct: 190 YQYLQKHGLKYHPLWDEGYLSVGD 213
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2,
CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}
Length = 211
Score = 107 bits (268), Expect = 6e-28
Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 27/203 (13%)
Query: 59 ASPLEIMDKAFQKFGNDIAIAFSGAEDVVLIEYAKLTG-----RPFRVFSLDTGRLNPET 113
A + I+ + +F N + +S +D ++ + PF V +DT E
Sbjct: 13 AESIHIIREVAAEFDN-PVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEM 71
Query: 114 HQFFDTVEKHYGIRIEYTFPNAVEVQALVRTKGLFSFYEDGHQECCRIRKVRPLKRALKG 173
++F D + + G+ + Q + + + + G
Sbjct: 72 YRFRDQMVEEMGLDLITHINPDGVAQGINPFTHGSAKHT-----DIMKTEGLKQALDKHG 126
Query: 174 LRAWITGQRKDQSPGTRAEIPVVQIDTSFEGIDG---------------GKGSLVKWNPL 218
A G R+D+ +RA+ V S D KG ++ PL
Sbjct: 127 FDAAFGGARRDEE-KSRAKERVYSFRDSKHRWDPKNQRPELWNVYNGNVNKGESIRVFPL 185
Query: 219 ANVKGQDIWNFLRAMNIPINSLH 241
+N DIW ++ IPI L+
Sbjct: 186 SNWTELDIWQYIYLEGIPIVPLY 208
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 63.2 bits (153), Expect = 6e-13
Identities = 15/107 (14%), Positives = 39/107 (36%), Gaps = 10/107 (9%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMG--VKVGKFRADG----D 382
+ + R ++ + + + ++ + + +
Sbjct: 10 LSFEKTVERFPYSVVKFDIASPYGEKHEA--FTAFSKSAHKATKDLLIATVGVKDYGELE 67
Query: 383 HKEFAKQ-KLQLVSFPTILFFPKHSAKPVKYPSE-KRDVDSLMAFVN 427
+K + K+ +FP+I F ++ + V+ PS +D+L AFV+
Sbjct: 68 NKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVS 114
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 124
Score = 56.0 bits (134), Expect = 2e-10
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 329 ENLARLQNREDPWLIVLYAPWCH------FCQAMEGSYIELAEQLEGMGVKVGKFRADGD 382
+N + + + ++ + P + E A+ LE GV G + +
Sbjct: 19 KNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDS--E 76
Query: 383 HKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
+KL L +I F + + ++Y E D+L+ F+
Sbjct: 77 KDAAVAKKLGLTEEDSIYVFKED--EVIEYDGE-FSADTLVEFLL 118
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 50.8 bits (121), Expect = 1e-08
Identities = 12/106 (11%), Positives = 32/106 (30%), Gaps = 10/106 (9%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMG------VKVGKFRADGD 382
++ + L+ + + + E + LAE V + +
Sbjct: 12 VTFYKVIPKSKFVLVKFDTQYPYGEKQDE--FKRLAENSASSDDLLVAEVGISDYGDK-L 68
Query: 383 HKEFAKQKLQLV-SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
+ E +++ S+P F + S V ++ ++
Sbjct: 69 NMELSEKYKLDKESYPVFYLFRDGDFENPVPYSGAVKVGAIQRWLK 114
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 50.8 bits (121), Expect = 1e-08
Identities = 15/128 (11%), Positives = 33/128 (25%), Gaps = 10/128 (7%)
Query: 306 NGSAPASDLFNSQKLVS--FRRTGIENLARL--QNREDPWLIVLYAPWCHFCQAMEGSYI 361
+ P L+ Q++++ + L Q + L+
Sbjct: 2 SNDTPFDALW--QRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIG 59
Query: 362 ELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDS 421
EL + +V + + + + FP L F +
Sbjct: 60 ELLREFPDYTWQVAIADLE-QSEAIGDRF-GVFRFPATLVFTGG--NYRGVLNGIHPWAE 115
Query: 422 LMAFVNAL 429
L+ + L
Sbjct: 116 LINLMRGL 123
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 50.2 bits (119), Expect = 2e-08
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 336 NREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVS 395
+ LI YAPWC C+A+ Y EL K A D ++
Sbjct: 18 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQG 76
Query: 396 FPTILFFPKHS-AKPVKYPSEKRDVDSLMAFVN 427
FPTI +P + +PV Y S R V+ L+ F+
Sbjct: 77 FPTIKLYPAGAKGQPVTY-SGSRTVEDLIKFIA 108
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 49.8 bits (118), Expect = 3e-08
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK 388
N A L+ YAPWC C+A+ Y + A +L+ G ++ + D +
Sbjct: 15 SNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLA 74
Query: 389 QKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
Q+ + +PTI FF K + R+ D ++ ++
Sbjct: 75 QQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLK 113
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 48.1 bits (114), Expect = 1e-07
Identities = 11/95 (11%), Positives = 24/95 (25%), Gaps = 4/95 (4%)
Query: 335 QNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLV 394
+ + L+ EL + +V + + + +
Sbjct: 27 RVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLE-QSEAIG-DRFNVR 84
Query: 395 SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429
FP L F K S L+ + ++
Sbjct: 85 RFPATLVFTDG--KLRGALSGIHPWAELLTLMRSI 117
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 45.2 bits (106), Expect = 8e-07
Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 5/96 (5%)
Query: 334 LQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQL 393
+ + L+ +A WC C+ + E+A++ K+ + + D K +
Sbjct: 16 VLKADGAILVDFWAEWCGPCKMIAPILDEIADE---YQGKLTVAKLNIDQNPGTAPKYGI 72
Query: 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429
PT+L F + L F++A
Sbjct: 73 RGIPTLLLFKNG--EVAATKVGALSKGQLKEFLDAN 106
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 44.8 bits (105), Expect = 1e-06
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 334 LQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQL 393
+ E P L+ +A WC CQ M A + + D +K ++
Sbjct: 16 VLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLK---VVKLEIDPNPTTVKKYKV 72
Query: 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
P + + + D L++F++
Sbjct: 73 EGVPALRLVKG--EQILDSTEGVISKDKLLSFLD 104
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 42.9 bits (100), Expect = 9e-06
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 334 LQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQL 393
+ + + L++ YAPWC C+ + +Y ELA+ V + D + ++
Sbjct: 26 VNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIE- 84
Query: 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
+PTI+ +P R +DSL F+
Sbjct: 85 -GYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIK 117
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 40.2 bits (93), Expect = 5e-05
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK 388
N + + P L+ +A WC C+ M E AE V V K + D
Sbjct: 8 ANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAK--LNVDENPETT 64
Query: 389 QKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429
+ ++S PT++ F +PVK + + L A + +
Sbjct: 65 SQFGIMSIPTLILFKGG--EPVKQLIGYQPKEQLEAQLADV 103
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 39.8 bits (92), Expect = 1e-04
Identities = 12/84 (14%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK 388
+ P +++++ WC C+A++ + E E E V + + + +
Sbjct: 16 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFV-MVNLEDEEEPKDE 74
Query: 389 QKLQLVSFPTILFFPKHSAKPVKY 412
+ + F S K
Sbjct: 75 DFSPDGGYIPRILFLDPSGKVHPE 98
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 39.1 bits (90), Expect = 1e-04
Identities = 6/110 (5%), Positives = 25/110 (22%), Gaps = 1/110 (0%)
Query: 317 SQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGK 376
+ T + ++++ + C +C+ G+ + + + +
Sbjct: 5 LDNIKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINS 64
Query: 377 FRADGDHKEFAKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFV 426
+ A + + + + F
Sbjct: 65 EEPSQLNDLQAFRSRYGIPTVPGFVHITDG-QINVRCDSSMSAQEIKDFA 113
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 38.5 bits (89), Expect = 1e-04
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 9/88 (10%)
Query: 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILF 401
+ V +P C +C + E + G K+ + D + L++ P I
Sbjct: 5 IEVFTSPTCPYCPMAIE---VVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI 61
Query: 402 FPKHSAKPVKYPSEKRDVDSLMAFVNAL 429
V++ + L +N
Sbjct: 62 NGV-----VRF-VGAPSREELFEAINDE 83
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 39.0 bits (90), Expect = 1e-04
Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK 388
E+ + + + ++ A WC C+ + + ELA++ + E
Sbjct: 17 EHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWN 76
Query: 389 QKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
+ + PT +F K V + D D L V
Sbjct: 77 VE----AMPTFIFLKD--GKLVDK-TVGADKDGLPTLVA 108
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 36.4 bits (83), Expect = 0.001
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 334 LQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQL 393
+ P L+ +APWC C+ + E+A + + V + + D + +
Sbjct: 15 VLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCV---KLNTDESPNVASEYGI 71
Query: 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
S PTI+ F K + +++ V
Sbjct: 72 RSIPTIMVFKGG--KKCETIIGAVPKATIVQTVE 103
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 36.3 bits (83), Expect = 0.001
Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 6/99 (6%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK 388
LA+ + P ++ A WC C+ + + L+ G V + D D
Sbjct: 15 AQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGK---VIFLKVDVDAVAAVA 71
Query: 389 QKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
+ + + PT + D L A V
Sbjct: 72 EAAGITAMPTFHVYKD--GVKADD-LVGASQDKLKALVA 107
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 119
Score = 36.0 bits (82), Expect = 0.001
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 2/99 (2%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK 388
++ D L +APWC C+ M Y++ AE L + + + + +
Sbjct: 18 DSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCME 77
Query: 389 QKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
+ FP++ F R ++++ F+
Sbjct: 78 HNIP--GFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMI 114
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 35.9 bits (82), Expect = 0.002
Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 6/96 (6%)
Query: 335 QNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLV 394
+ P ++ ++ WC C+AM Y + E + + ++L +
Sbjct: 22 AAGDKPVVLDMFTQWCGPCKAMAPKYE---KLAEEYLDVIFLKLDCNQENKTLAKELGIR 78
Query: 395 SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNALR 430
PT + V D L+ + A R
Sbjct: 79 VVPTFKILKE--NSVVGE-VTGAKYDKLLEAIQAAR 111
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 85
Score = 33.8 bits (76), Expect = 0.006
Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 9/86 (10%)
Query: 342 LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLVSFPTILF 401
+ + +P C C A + E M V + + +++ PTI+
Sbjct: 6 IELFTSPMCPHCPAAKRVVE---EVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI 62
Query: 402 FPKHSAKPVKYPSEKRDVDSLMAFVN 427
V++ ++L+ +
Sbjct: 63 N-----GDVEF-IGAPTKEALVEAIK 82
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 34.0 bits (77), Expect = 0.009
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 347 APWCHFCQAMEGSYIELAEQLEGMG----VKVGKFRADGDHKEFAKQKLQLVSFPTILFF 402
WC C E E + + +VG+ D ++ L++ + PT+L +
Sbjct: 37 KSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKY 96
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 33.3 bits (75), Expect = 0.012
Identities = 10/100 (10%), Positives = 28/100 (28%), Gaps = 4/100 (4%)
Query: 329 ENLARLQNREDPWLIVL-YAPWCHFCQAMEGSYIELAEQLEG-MGVKVGKFRADGDHKEF 386
E ++N + I++ P C +C + A + K+ +
Sbjct: 5 ETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPE 64
Query: 387 AKQKLQLVSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFV 426
+ +++ P I+ + + +
Sbjct: 65 WADQYNVMAVPKIVIQVN--GEDRVEFEGAYPEKMFLEKL 102
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 33.2 bits (75), Expect = 0.021
Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 334 LQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQL 393
L + +I W C M+ +AE+++ V D + +L
Sbjct: 18 LSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIY---LVDITEVPDFNKMYEL 74
Query: 394 VSFPTILFFPK 404
T++FF +
Sbjct: 75 YDPCTVMFFFR 85
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 33.2 bits (75), Expect = 0.022
Identities = 16/134 (11%), Positives = 39/134 (29%), Gaps = 5/134 (3%)
Query: 299 NGVAQHTNGSAPASDLFNSQKLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEG 358
+G + +DLF + + + Q + +I + CQ +
Sbjct: 3 SGSSGIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNR 62
Query: 359 SYIELAEQLEGMGVKVGKFRADGDHKEFAK--QKLQLVSFPTILFFPKHSAKPVK---YP 413
+ ++ D +E + Q +L FP + + + +
Sbjct: 63 DVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQL 122
Query: 414 SEKRDVDSLMAFVN 427
+D + F+
Sbjct: 123 DVSSFLDQVTGFLG 136
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 32.0 bits (72), Expect = 0.038
Identities = 7/69 (10%), Positives = 17/69 (24%), Gaps = 4/69 (5%)
Query: 334 LQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQL 393
++ C C + ++ + + D + +
Sbjct: 17 SGAGSRLAVVKFTMRGCGPCLRIAPAFS----SMSNKYPQAVFLEVDVHQCQGTAATNNI 72
Query: 394 VSFPTILFF 402
+ PT FF
Sbjct: 73 SATPTFQFF 81
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 31.6 bits (71), Expect = 0.048
Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 335 QNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLV 394
+ ++ A WC C+ ++ + L+E+ + D D + + ++
Sbjct: 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIF----LEVDVDDCQDVASECEVK 72
Query: 395 SFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVNAL 429
PT FF K + V + + L A +N L
Sbjct: 73 CMPTFQFFKK--GQKVGE-FSGANKEKLEATINEL 104
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 30.9 bits (69), Expect = 0.070
Identities = 9/74 (12%), Positives = 23/74 (31%), Gaps = 6/74 (8%)
Query: 328 IENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFA 387
+E + + D Y+ CH C + + +A + G +
Sbjct: 7 LEQIRDIDG--DFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTA---IDGGTFQNEI 61
Query: 388 KQKLQLVSFPTILF 401
++ ++ P +
Sbjct: 62 TER-NVMGVPAVFV 74
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 29.8 bits (66), Expect = 0.17
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 326 TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE 385
T + ++ + ++ +A WC C+ + Y E ++ M + D D
Sbjct: 6 TSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVF----IKVDVDEVS 61
Query: 386 FAKQKLQLVSFPTILFFPK 404
+K + S PT +
Sbjct: 62 EVTEKENITSMPTFKVYKN 80
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 29.8 bits (66), Expect = 0.20
Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Query: 326 TGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKE 385
+E + + + + A WC C+ +E ++ V + D D+
Sbjct: 14 YSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPME----KIAYEFPTVKFAKVDADNNS 69
Query: 386 FAKQKLQLVSFPTILFF 402
K +++ PT +
Sbjct: 70 EIVSKCRVLQLPTFIIA 86
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 29.1 bits (64), Expect = 0.37
Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 334 LQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAKQKLQL 393
+ E P ++ +APWC C+ + ELA++ G + ++ + D + +
Sbjct: 13 VLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK---IAVYKLNTDEAPGIATQYNI 69
Query: 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFVN 427
S PT+LFF + + +L +
Sbjct: 70 RSIPTVLFFKNG--ERKESIIGAVPKSTLTDSIE 101
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 29.6 bits (66), Expect = 0.62
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 7/68 (10%)
Query: 336 NREDPWLIVLYAPWCHFCQAMEGSY-IELAEQLEGMGVKVGKFRADGDHKEFAKQKLQLV 394
+ ++ +Y C A+ S AE K+ + +
Sbjct: 118 QKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKI-----RASNTGAG-DRFSSD 171
Query: 395 SFPTILFF 402
PT+L +
Sbjct: 172 VLPTLLVY 179
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 28.3 bits (62), Expect = 0.67
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Query: 329 ENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFAK 388
E L + + ++ A WC C+ + + L V + D D +
Sbjct: 19 EQLQKANESKTLVVVDFTASWCGPCRFIAPFF----ADLAKKLPNVLFLKVDTDELKSVA 74
Query: 389 QKLQLVSFPTILFFPK 404
+ + PT +F +
Sbjct: 75 SDWAIQAMPTFMFLKE 90
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 29.2 bits (64), Expect = 0.72
Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 5/76 (6%)
Query: 329 ENLARLQNREDPW-LIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRADGDHKEFA 387
RLQ E + L+V WC CQ + + + + E
Sbjct: 44 ALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAI----ISKGRAEDD 99
Query: 388 KQKLQLVSFPTILFFP 403
++ + I
Sbjct: 100 LRQRLALERIAIPLVL 115
>d2fe0a1 b.134.1.1 (A:1-131) Small myristoylated protein 1, Smp-1
{Leishmania major [TaxId: 5664]}
Length = 131
Score = 27.8 bits (62), Expect = 1.4
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 9/54 (16%)
Query: 99 FRVFSLDTGRL----NPETHQFF---DTVEKHYGIRIEYTFPNAVEVQALVRTK 145
+ F D G L N + Q+ DT Y + + TF +++AL +TK
Sbjct: 27 TKGFEKDNGLLFRIVNKKKKQWAYYNDT--TQYEMHVLVTFNEDCDIKALGKTK 78
>d1ic8a2 a.35.1.1 (A:87-180) Hepatocyte nuclear factor 1a
(LFB1/HNF1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 26.7 bits (59), Expect = 1.6
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 280 LHNGNIKQEELSQHININGNGVAQHTNGSAPASD 313
L NI Q E+ +N + ++QH N P
Sbjct: 37 LQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKT 70
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 27.6 bits (60), Expect = 1.7
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 330 NLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKV 374
++ +++ P LI +A WC C + G + A+ + +
Sbjct: 17 SVYLKKDK--PTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANL 59
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 27.3 bits (59), Expect = 2.1
Identities = 13/72 (18%), Positives = 24/72 (33%)
Query: 319 KLVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFR 378
+L S G A + + P L+ ++A WC +A +L+ Q + K
Sbjct: 1 RLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTSRAEHQYLNQLSAQGIRVVGMNYKDD 60
Query: 379 ADGDHKEFAKQK 390
+
Sbjct: 61 RQKAISWLKELG 72
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 27.2 bits (59), Expect = 2.2
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 337 REDPWLIVLYAPWCHFCQAMEGSYIEL 363
E P LI ++ CH C+ E
Sbjct: 28 GEKPTLIHFWSISCHLCKEAMPQVNEF 54
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal
domain {Thermus thermophilus [TaxId: 274]}
Length = 165
Score = 27.4 bits (59), Expect = 2.3
Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 2/163 (1%)
Query: 76 IAIAFSGAED-VVLIEYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEYTFPN 134
I +A+SG D +++++ K T R V + E + G
Sbjct: 3 IVLAYSGGLDTSIILKWLKETYR-AEVIAFTADIGQGEEVEEAREKALRTGASKAIALDL 61
Query: 135 AVEVQALVRTKGLFSFYEDGHQECCRIRKVRPLKRALKGLRAWITGQRKDQSPGTRAEIP 194
E + + RPL A G T
Sbjct: 62 KEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGND 121
Query: 195 VVQIDTSFEGIDGGKGSLVKWNPLANVKGQDIWNFLRAMNIPI 237
V+ + + + + W + +++ + A IP+
Sbjct: 122 QVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPV 164
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 134
Score = 27.2 bits (59), Expect = 2.4
Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 21/119 (17%)
Query: 330 NLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLEGMGVKVGKFRAD--------- 380
+ A LQ + P ++ + PWC FC A S ++A + RAD
Sbjct: 18 DGASLQGK--PAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVS 75
Query: 381 ---------GDHKEFAKQKLQLVSFPTILFF-PKHSAKPVKYPSEKRDVDSLMAFVNAL 429
D + + P +F+ ++ V P+ D L V AL
Sbjct: 76 KYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAAL 134
>d3byqa1 d.79.9.1 (A:2-192) Uncharacterized protein BB2672
{Bordetella bronchiseptica [TaxId: 518]}
Length = 191
Score = 27.4 bits (61), Expect = 2.8
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 133 PNAVEVQALVRTKGLFSFYEDGHQECCRIRKVRPLKRALKGLRAWITGQRKDQSPGTRAE 192
+ +EV + G+ E H ++ L +A + + + G R
Sbjct: 72 KDNIEVYSKAAIVGVDGEME--HGAVWHEAGGWAMRSVLGEPKAMVPAVKAVATAGYRMM 129
Query: 193 IPVVQIDTSF 202
+PV I S+
Sbjct: 130 VPVHYIHASY 139
>d1a8ya2 c.47.1.3 (A:127-228) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 102
Score = 25.9 bits (57), Expect = 4.2
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 394 VSFPTILFFPKHSAKPVKYPSEKRDVDSLMAFV 426
+ I F+ +PV P + + ++ FV
Sbjct: 64 LKLNEIDFYEAFMEEPVTIPDKPNSEEEIVNFV 96
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 26.5 bits (57), Expect = 5.1
Identities = 8/71 (11%), Positives = 17/71 (23%), Gaps = 11/71 (15%)
Query: 201 SFEGIDG-GKGSLVKWNPLANVKGQDIWNFLRAMNIPINSLHSQGYISIGCEPCTRPVLP 259
EG+D GK + + + L A L + + + +
Sbjct: 7 VLEGVDRAGKSTQSRK----------LVEALCAAGHRAELLRFPERSTEIGKLLSSYLQK 56
Query: 260 GQHEREGRWWW 270
+
Sbjct: 57 KSDVEDHSVHL 67
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 26.4 bits (57), Expect = 5.9
Identities = 16/169 (9%), Positives = 35/169 (20%), Gaps = 11/169 (6%)
Query: 201 SFEGIDG-GKGSLVKWNPLANVKGQDIWNFLRAMNIPINSLHSQGYISIGCEPCTRPVLP 259
EG++G GK + + L + I + + E +L
Sbjct: 6 VIEGLEGAGKTTARNV----------VVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLD 55
Query: 260 GQHEREGRWWWEDAKAKECGLHNGNIKQEELSQHININGNGVAQHTNGSAPASDLFNSQK 319
+ + + ++ N +H +
Sbjct: 56 IKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGID 115
Query: 320 LVSFRRTGIENLARLQNREDPWLIVLYAPWCHFCQAMEGSYIELAEQLE 368
L + +L V +A E +
Sbjct: 116 QHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFD 164
>d1zsqa1 b.55.1.8 (A:74-198) Myotubularin-related protein 2,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 125
Score = 25.2 bits (55), Expect = 7.8
Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 24/141 (17%)
Query: 13 LLNGSGSISSSFAVCYYGPHHKGVEGRIESTNDHEDYEKLARGMESAS--PLEIMDKAFQ 70
LL G + V Y P V G + TN ++ + R L ++++ +
Sbjct: 5 LLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEK 64
Query: 71 KFGNDIAIAFSGAEDVVLIEYAKLTGRPFRVFSLDTGRLNPETHQFFDTVEKHYGIRIEY 130
G S + + R F+ + K Y
Sbjct: 65 IGGASSRGENS--------YGLETVCKDIRNLRFAHKPEGRTRRSIFENLMK-------Y 109
Query: 131 TFPNAVEVQALVRTKGLFSFY 151
FP + LF+F
Sbjct: 110 AFP-------VSNNLPLFAFE 123
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.414
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,677,517
Number of extensions: 78346
Number of successful extensions: 257
Number of sequences better than 10.0: 1
Number of HSP's gapped: 242
Number of HSP's successfully gapped: 48
Length of query: 430
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 342
Effective length of database: 1,199,356
Effective search space: 410179752
Effective search space used: 410179752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.3 bits)