Query 042286
Match_columns 303
No_of_seqs 258 out of 1785
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 07:46:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042286.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042286hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 1.8E-34 6.3E-39 243.7 24.0 263 31-302 4-278 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 6.9E-34 2.4E-38 241.1 19.7 264 31-302 5-284 (507)
3 3qz1_A Steroid 21-hydroxylase; 100.0 3.6E-34 1.2E-38 242.2 14.5 259 26-302 20-284 (496)
4 2hi4_A Cytochrome P450 1A2; CY 100.0 7.5E-33 2.6E-37 233.8 21.7 262 31-302 12-287 (495)
5 3e6i_A CYPIIE1, P450-J, cytoch 100.0 4.8E-32 1.6E-36 228.0 23.9 259 31-302 6-272 (476)
6 3czh_A Cytochrome P450 2R1; vi 100.0 1.2E-32 4.1E-37 231.6 20.1 261 32-302 9-278 (481)
7 2fdv_A Cytochrome P450 2A6; CY 100.0 5.6E-32 1.9E-36 227.4 21.9 258 33-302 8-273 (476)
8 1r9o_A Cytochrome P450 2C9; mo 100.0 1E-31 3.5E-36 225.9 21.3 258 33-302 9-274 (477)
9 1po5_A Cytochrome P450 2B4; ox 100.0 1.1E-31 3.6E-36 225.8 20.2 258 33-302 8-273 (476)
10 3gw9_A Sterol 14alpha-demethyl 100.0 4.3E-32 1.5E-36 226.8 14.7 254 34-302 2-258 (450)
11 3s79_A Cytochrome P450 19A1; o 100.0 2.6E-31 8.9E-36 225.0 17.3 251 31-302 41-300 (503)
12 2ij2_A Cytochrome P450 BM3; mo 100.0 1.4E-30 4.8E-35 218.4 21.3 252 35-302 3-258 (470)
13 3k9v_A 1,25-dihydroxyvitamin D 100.0 7.3E-31 2.5E-35 221.2 19.0 256 30-302 19-288 (482)
14 3tbg_A Cytochrome P450 2D6; mo 100.0 5E-30 1.7E-34 215.9 23.5 263 31-302 6-277 (479)
15 3ld6_A Lanosterol 14-alpha dem 100.0 1.6E-31 5.5E-36 223.7 13.3 246 35-302 11-257 (461)
16 3nxu_A Cytochrome P450 3A4; al 100.0 7.6E-32 2.6E-36 227.3 10.8 254 33-302 12-277 (485)
17 2ve3_A Putative cytochrome P45 100.0 6.5E-29 2.2E-33 206.9 16.6 241 31-302 8-248 (444)
18 3i3k_A Lanosterol 14-alpha dem 100.0 2.3E-29 7.8E-34 210.8 13.3 249 31-302 7-257 (461)
19 2cib_A Cytochrome P450 51; hem 100.0 2.3E-28 7.8E-33 204.2 18.1 245 35-302 4-250 (455)
20 3dbg_A Putative cytochrome P45 100.0 2.4E-29 8E-34 211.0 11.2 244 34-302 22-268 (467)
21 3n9y_A Cholesterol SIDE-chain 100.0 1.2E-27 4E-32 201.9 19.3 255 31-302 5-280 (487)
22 2cd8_A Cytochrome P450 monooxy 100.0 3.2E-27 1.1E-31 195.8 17.1 230 31-302 22-257 (436)
23 3mdm_A Cholesterol 24-hydroxyl 99.9 1.4E-25 4.8E-30 187.6 18.0 233 53-302 9-248 (456)
24 1izo_A P450bsbeta, cytochrome 99.9 9.2E-25 3.1E-29 180.4 21.2 226 43-301 8-236 (417)
25 3awm_A Fatty acid alpha-hydrox 99.9 1.3E-24 4.4E-29 179.4 20.4 229 37-301 4-235 (415)
26 3v8d_A Cholesterol 7-alpha-mon 99.9 1.1E-26 3.7E-31 196.1 7.5 247 31-302 9-262 (491)
27 1jfb_A Nitric-oxide reductase 99.9 6.1E-24 2.1E-28 174.8 22.9 225 36-302 2-234 (404)
28 2zbx_A Cytochrome P450-SU1; be 99.9 5.5E-23 1.9E-27 169.3 23.0 224 35-302 5-238 (412)
29 1ued_A P450 OXYC, P450 monooxy 99.9 1E-23 3.5E-28 173.3 18.0 220 33-302 8-239 (406)
30 1cpt_A Cytochrome P450-TERP; o 99.9 4.8E-24 1.6E-28 176.5 15.9 238 33-302 4-261 (428)
31 3oo3_A OXY protein; cytochrome 99.9 4.6E-22 1.6E-26 162.5 20.6 206 53-302 11-220 (384)
32 3aba_A Cytochrome P450; oxidor 99.9 9.4E-22 3.2E-26 161.5 21.9 209 51-302 16-231 (403)
33 1s1f_A Putative cytochrome P45 99.9 3.1E-22 1E-26 164.5 18.5 221 35-302 8-236 (406)
34 2wm5_A CYP124, putative cytoch 99.9 5.3E-22 1.8E-26 164.4 19.5 213 54-302 44-268 (435)
35 2jjn_A Cytochrome P450 113A1; 99.9 7.7E-23 2.6E-27 168.4 14.3 221 30-302 14-235 (411)
36 2zwu_A Camphor 5-monooxygenase 99.9 2.4E-22 8.1E-27 165.4 16.9 226 30-302 6-243 (415)
37 3ivy_A Cytochrome P450 CYP125; 99.9 2E-22 7E-27 166.9 16.5 228 35-302 18-262 (433)
38 3tkt_A Cytochrome P450; aromat 99.9 1.5E-22 5.2E-27 168.4 15.7 219 56-302 47-283 (450)
39 3abb_A CYP105D6, cytochrome P4 99.9 5.4E-22 1.8E-26 163.3 18.7 209 50-302 20-237 (408)
40 3tyw_A Putative cytochrome P45 99.9 1.9E-21 6.6E-26 160.4 21.2 209 51-302 26-243 (417)
41 1odo_A Putative cytochrome P45 99.9 8.2E-22 2.8E-26 162.2 16.2 213 51-302 12-236 (408)
42 2y5n_A MYCG, P-450-like protei 99.9 2.9E-21 9.8E-26 159.1 19.3 210 51-302 34-248 (417)
43 1n97_A CYP175A1; electron tran 99.9 1.3E-23 4.4E-28 171.9 5.2 197 39-261 3-200 (389)
44 4fb2_A P450CIN; heme, monooxyg 99.9 1.4E-21 4.9E-26 160.2 16.8 208 51-302 16-226 (398)
45 2z36_A MOXA, cytochrome P450 t 99.9 3.2E-21 1.1E-25 158.7 18.4 208 52-302 20-239 (413)
46 2xkr_A CYP142, putative cytoch 99.9 6.2E-21 2.1E-25 156.5 19.6 207 53-302 17-224 (398)
47 3ejb_B Biotin biosynthesis cyt 99.9 7.9E-21 2.7E-25 156.2 20.2 212 53-302 12-228 (404)
48 3dax_A Cytochrome P450 7A1; ch 99.9 5.5E-23 1.9E-27 173.5 6.7 244 32-301 10-261 (491)
49 1z8o_A 6-deoxyerythronolide B 99.9 6E-21 2E-25 156.8 17.8 208 52-302 12-235 (404)
50 3a4g_A Vitamin D hydroxylase; 99.9 1E-20 3.6E-25 155.5 18.6 207 52-302 18-230 (411)
51 1q5d_A P450 epoxidase; cytochr 99.9 5E-21 1.7E-25 158.0 16.3 214 52-302 24-248 (419)
52 2dkk_A Cytochrome P450; CYP158 99.9 2.4E-21 8.1E-26 159.3 13.9 206 53-302 26-239 (411)
53 1gwi_A CYP154C1, cytochrome P4 99.9 1.4E-20 4.8E-25 154.9 17.7 209 51-302 14-236 (411)
54 3nc3_A Cytochrome P450 CYPX; c 99.9 4.7E-21 1.6E-25 159.0 14.6 211 53-302 52-263 (441)
55 2z3t_A Cytochrome P450; monoxy 99.9 1.2E-20 3.9E-25 156.0 16.8 213 53-302 19-248 (425)
56 3lxh_A Cytochrome P450; heme, 99.9 1.9E-20 6.6E-25 154.6 17.9 212 53-302 37-250 (421)
57 3r9b_A Cytochrome P450 164A2; 99.9 2.3E-20 7.8E-25 154.2 17.0 215 52-302 27-250 (418)
58 3b6h_A Prostacyclin synthase; 99.9 2.6E-21 8.8E-26 163.6 11.3 245 31-299 14-265 (498)
59 2xbk_A PIMD protein; epoxidati 99.9 1.1E-19 3.7E-24 149.0 20.4 201 52-302 24-235 (404)
60 2uuq_A CYP130, cytochrome P450 99.9 2.8E-20 9.6E-25 153.2 17.0 209 53-302 24-244 (414)
61 3buj_A CALO2; heme, iron, meta 99.8 5.2E-20 1.8E-24 151.0 15.9 207 54-302 13-227 (397)
62 3oft_A Cytochrome P450, CYP101 99.8 5.5E-20 1.9E-24 150.8 15.8 207 51-302 21-228 (396)
63 3rwl_A Cytochrome P450 alkane 99.8 5.1E-19 1.7E-23 146.1 19.5 212 53-302 37-259 (426)
64 3b98_A Prostaglandin I2 syntha 99.8 2.1E-21 7.1E-26 163.2 5.1 155 31-193 14-174 (475)
65 3mgx_A Putative P450 monooxyge 99.8 1.1E-19 3.8E-24 149.5 14.4 206 53-302 36-248 (415)
66 3dsk_A Cytochrome P450 74A, ch 99.8 3.4E-20 1.2E-24 156.6 11.2 164 31-197 24-206 (495)
67 1lfk_A OXYB, P450 monooxygenas 99.8 2.4E-19 8.2E-24 147.0 15.3 202 57-302 16-230 (398)
68 3dan_A Cytochrome P450 74A2; A 99.8 1.1E-19 3.9E-24 152.6 12.1 162 32-196 6-187 (473)
69 1n40_A P450 MT2, cytochrome P4 99.8 7.7E-19 2.6E-23 143.8 14.0 205 52-302 14-227 (396)
70 2wiy_A XPLA-heme, cytochrome P 99.8 2.2E-18 7.5E-23 141.0 16.0 208 54-302 20-227 (394)
71 3p3o_A Cytochrome P450; monoox 99.8 1.9E-19 6.5E-24 148.4 9.6 209 53-302 32-247 (416)
72 3b4x_A 367AA long hypothetical 99.8 2.7E-18 9.3E-23 139.1 13.1 193 56-302 1-204 (367)
73 1io7_A Cytochrome P450 CYP119; 99.7 2E-17 6.9E-22 134.2 12.8 192 56-302 1-203 (368)
74 2rfb_A Cytochrome P450; heme, 99.7 3.2E-17 1.1E-21 131.7 12.6 180 65-302 2-182 (343)
75 4dxy_A Cytochrome P450, CYP101 99.7 1.4E-15 4.7E-20 125.0 19.1 212 53-302 36-249 (417)
76 4dnj_A Putative cytochrome P45 99.6 6.8E-15 2.3E-19 121.0 14.9 148 41-195 18-172 (412)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.4 2.1E-10 7.3E-15 92.5 -11.9 132 37-195 36-180 (381)
78 2diu_A KIAA0430 protein; struc 68.7 6 0.0002 24.5 3.4 51 44-95 12-65 (96)
79 1s79_A Lupus LA protein; RRM, 67.0 20 0.00069 22.3 6.3 50 44-95 14-71 (103)
80 3d2w_A TAR DNA-binding protein 65.0 20 0.00067 21.5 5.7 53 38-92 8-64 (89)
81 2krb_A Eukaryotic translation 63.3 20 0.00067 20.8 6.2 51 45-95 5-66 (81)
82 3lqv_A PRE-mRNA branch site pr 55.6 35 0.0012 21.4 7.6 58 36-95 3-66 (115)
83 1iqt_A AUF1, heterogeneous nuc 54.6 27 0.00092 19.7 4.6 39 57-95 13-60 (75)
84 4f25_A Polyadenylate-binding p 53.6 39 0.0013 21.3 6.0 50 44-95 8-64 (115)
85 3beg_B Splicing factor, argini 48.1 49 0.0017 20.8 6.5 50 44-95 19-70 (115)
86 2wbr_A GW182, gawky, LD47780P; 47.0 46 0.0016 20.2 5.9 50 43-94 9-61 (89)
87 2nlw_A Eukaryotic translation 46.6 49 0.0017 20.4 6.4 53 43-95 17-80 (105)
88 1pi7_A VPU protein, U ORF prot 45.5 25 0.00087 17.1 2.7 6 1-6 1-6 (36)
89 2mss_A Protein (musashi1); RNA 44.1 42 0.0014 18.8 5.3 38 57-94 13-59 (75)
90 1sjq_A Polypyrimidine tract-bi 41.8 63 0.0021 20.2 6.4 53 40-94 15-70 (105)
91 2jvr_A Nucleolar protein 3; RN 37.2 77 0.0026 19.9 5.7 51 43-95 30-86 (111)
92 3s8s_A Histone-lysine N-methyl 35.5 81 0.0028 19.7 5.7 51 43-95 8-67 (110)
93 1x4c_A Splicing factor, argini 35.3 79 0.0027 19.5 7.3 50 44-95 18-69 (108)
94 2a3j_A U1 small nuclear ribonu 35.0 78 0.0027 20.5 4.8 52 44-95 32-91 (127)
95 1x4e_A RNA binding motif, sing 34.6 68 0.0023 18.5 5.2 50 43-94 7-65 (85)
96 4fxv_A ELAV-like protein 1; RN 32.6 85 0.0029 19.1 5.6 50 44-95 22-80 (99)
97 1whv_A Poly(A)-specific ribonu 31.3 93 0.0032 19.3 4.2 39 57-95 29-68 (100)
98 2cqc_A Arginine/serine-rich sp 31.1 84 0.0029 18.5 6.1 51 43-95 17-76 (95)
99 3omy_A Protein TRAM; DNA bindi 31.0 64 0.0022 17.1 3.7 32 250-282 11-42 (52)
100 1whx_A Hypothetical protein ri 30.9 98 0.0033 19.2 6.3 49 45-95 14-65 (111)
101 1sjr_A Polypyrimidine tract-bi 30.6 1.3E+02 0.0045 20.7 6.5 49 45-95 50-103 (164)
102 2d9o_A DNAJ (HSP40) homolog, s 30.6 96 0.0033 19.1 5.2 39 57-95 31-73 (100)
103 3ex7_B RNA-binding protein 8A; 30.4 1.1E+02 0.0036 19.5 6.2 50 44-95 25-83 (126)
104 2ad9_A Polypyrimidine tract-bi 30.3 1.1E+02 0.0037 19.6 6.2 50 43-94 33-85 (119)
105 2dgt_A RNA-binding protein 30; 29.9 88 0.003 18.4 6.1 50 44-95 13-63 (92)
106 3v4m_A Splicing factor U2AF 65 28.2 1.1E+02 0.0037 18.9 5.6 38 58-95 30-78 (105)
107 1p27_B RNA-binding protein 8A; 27.5 1.1E+02 0.0037 18.6 5.8 49 45-95 27-84 (106)
108 1rk8_A CG8781-PA, CG8781-PA pr 27.4 1.5E+02 0.005 20.1 6.1 50 44-95 75-133 (165)
109 1x5p_A Negative elongation fac 27.3 1E+02 0.0035 18.4 5.2 48 44-95 18-68 (97)
110 2kxn_B Transformer-2 protein h 27.0 1.3E+02 0.0044 19.4 7.7 51 43-95 48-107 (129)
111 2ahq_A Sigma-54, RNA polymeras 27.0 46 0.0016 19.5 2.3 11 292-302 37-47 (76)
112 1oo0_B CG8781-PA, drosophila Y 26.9 1.1E+02 0.0039 18.7 6.6 49 45-95 30-87 (110)
113 3s7r_A Heterogeneous nuclear r 26.9 97 0.0033 17.9 4.3 51 43-95 13-72 (87)
114 2dnq_A RNA-binding protein 4B; 26.7 1E+02 0.0035 18.0 5.9 51 43-95 10-61 (90)
115 4f02_A Polyadenylate-binding p 25.8 1.5E+02 0.0053 21.0 5.6 51 43-95 17-76 (213)
116 2fy1_A RNA-binding motif prote 25.5 1.3E+02 0.0044 18.9 5.3 50 44-95 10-67 (116)
117 2voo_A Lupus LA protein; RNA-b 25.5 1.1E+02 0.0036 21.6 4.5 49 45-95 113-169 (193)
118 1x4f_A Matrin 3; structural ge 25.4 1.3E+02 0.0045 19.0 4.8 51 43-94 27-80 (112)
119 2cq4_A RNA binding motif prote 25.1 1.3E+02 0.0043 18.6 4.5 47 45-93 29-84 (114)
120 1wf0_A TDP-43, TAR DNA-binding 25.0 96 0.0033 18.0 3.7 46 45-92 9-58 (88)
121 2kvi_A Nuclear polyadenylated 24.7 1.2E+02 0.004 18.1 5.0 51 44-95 13-64 (96)
122 2hvz_A Splicing factor, argini 24.6 1.2E+02 0.0041 18.2 5.8 48 46-95 5-56 (101)
123 1x4d_A Matrin 3; structural ge 24.4 1.3E+02 0.0045 18.5 5.7 55 40-95 14-71 (102)
124 2cpi_A CCR4-NOT transcription 24.4 1E+02 0.0034 19.1 3.9 51 43-95 17-82 (111)
125 2pe8_A Splicing factor 45; RRM 24.0 1.3E+02 0.0046 18.5 5.1 53 43-95 10-75 (105)
126 1ghh_A DINI, DNA-damage-induci 23.5 1.2E+02 0.0042 17.9 4.0 36 59-94 25-68 (81)
127 2d9p_A Polyadenylate-binding p 23.5 1.3E+02 0.0044 18.1 6.2 53 41-95 15-74 (103)
128 1p1t_A Cleavage stimulation fa 23.4 1.3E+02 0.0044 18.1 4.8 49 45-95 12-69 (104)
129 2cq1_A PTB-like protein L; RRM 22.7 1.4E+02 0.0048 18.3 6.0 50 43-94 17-69 (101)
130 2dgu_A Heterogeneous nuclear r 22.5 1.4E+02 0.0046 18.1 5.5 51 43-95 13-64 (103)
131 2dgv_A HnRNP M, heterogeneous 22.5 1.2E+02 0.0043 17.6 6.2 50 44-95 11-67 (92)
132 3zzy_A Polypyrimidine tract-bi 22.2 1.7E+02 0.0059 19.1 4.7 49 45-95 32-85 (130)
133 1x4b_A Heterogeneous nuclear r 21.9 1.5E+02 0.005 18.4 4.4 49 45-95 31-88 (116)
134 3s6e_A RNA-binding protein 39; 21.9 99 0.0034 19.6 3.4 37 59-95 33-74 (114)
135 2cqi_A Nucleolysin TIAR; RNA r 21.6 1.4E+02 0.0048 17.9 6.0 50 43-94 17-73 (103)
136 3bs9_A Nucleolysin TIA-1 isofo 21.4 1.3E+02 0.0043 17.3 5.1 50 44-95 9-67 (87)
137 2do4_A Squamous cell carcinoma 21.4 1.4E+02 0.0048 17.8 6.9 51 43-95 19-77 (100)
138 2dnh_A Bruno-like 5, RNA bindi 21.1 1.5E+02 0.005 17.9 5.6 51 43-95 17-75 (105)
139 2jrs_A RNA-binding protein 39; 20.8 1.6E+02 0.0054 18.1 6.1 50 44-95 29-87 (108)
140 1b35_D CRPV, protein (cricket 20.7 88 0.003 16.3 2.3 27 42-68 30-56 (57)
141 1nu4_A U1A RNA binding domain; 20.6 1.4E+02 0.0049 17.6 5.7 53 43-95 10-70 (97)
142 2bz2_A Negative elongation fac 20.4 1.3E+02 0.0046 19.0 3.9 48 44-95 42-92 (121)
143 3md1_A Nuclear and cytoplasmic 20.2 1.3E+02 0.0045 17.0 5.4 39 57-95 15-62 (83)
144 4gyx_A Type III collagen fragm 20.1 61 0.0021 14.2 1.4 9 36-44 4-12 (31)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=1.8e-34 Score=243.71 Aligned_cols=263 Identities=21% Similarity=0.326 Sum_probs=201.2
Q ss_pred CCCCCCCCCCCCCCcccccCCCC--CCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccc
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHLG--PMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSG 108 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 108 (303)
++..++||||+++|++||++++. +.++..+.+|+++||+||++++|+.++|+|+||+++++++.++...|.+++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 34567899999999999999883 4678899999999999999999999999999999999999998888988876554
Q ss_pred ccccccCCcceeeccCChHHHHHHHHHHHhhcCh--hhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHH
Q 042286 109 AKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSG--KALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALG 186 (303)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~ 186 (303)
.......+.|++++++|+.|+.+|++++ +.|+. ..+..+.+.+.+++..+++.+....|+++|+.+.+.++++|+|+
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~ 162 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS 162 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence 4444444567888877999999999998 99874 45677899999999999999986567789999999999999999
Q ss_pred HHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 042286 187 RVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNG 266 (303)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 266 (303)
.++||.+++.. ++....+......+........+...+|++++++. ...++..+..+.+.+++.++++++++..
T Consensus 163 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 236 (494)
T 3swz_A 163 LICFNTSYKNG-----DPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYKEKF 236 (494)
T ss_dssp HHHHSCCCCTT-----CTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHcCCcCCCC-----CHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999988652 23444444544554444444456677898887732 3456677788889999999999888765
Q ss_pred CCCCCCcCCHHHHHHhcccccC--------CCCCCCHHHHhhhc
Q 042286 267 RDGGNKHTDLLGTLISLMDDAN--------GEEKLTETEIKALL 302 (303)
Q Consensus 267 ~~~~~~~~d~l~~ll~~~~~~~--------~~~~l~~~ei~~~~ 302 (303)
+. ....|+++.|+++..+.+ ....+++++|.+++
T Consensus 237 ~~--~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~ 278 (494)
T 3swz_A 237 RS--DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTI 278 (494)
T ss_dssp CT--TCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHH
T ss_pred cc--cchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHH
Confidence 43 346799999998653210 11258999987654
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-34 Score=241.08 Aligned_cols=264 Identities=24% Similarity=0.359 Sum_probs=184.3
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccccc
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAK 110 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 110 (303)
++..+.||||+++|++|+++.+.++++..+.+|+++||+||++++|+.++|+|+||+++++|+.++...|.+++......
T Consensus 5 ~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~ 84 (507)
T 3pm0_A 5 TSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFR 84 (507)
T ss_dssp -----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHH
T ss_pred cCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHH
Confidence 44557899999999999999888889999999999999999999999999999999999999988777888776554433
Q ss_pred ccccCCcceeeccCChHHHHHHHHHHHhhcChhhH------HHhHHHHHHHHHHHHHHHHh--cCCCcccHHHHHHHHHH
Q 042286 111 HIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKAL------DDYRHVRQEEMAVLARALAS--AGTEPVNLAQRLNLCVV 182 (303)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l------~~~~~~~~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~ 182 (303)
... .+.+++++.+|+.|+++|++++ +.|+.... +.+.+.+.++++.+++.+.. ..++++|+.+++.++++
T Consensus 85 ~~~-~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~ 162 (507)
T 3pm0_A 85 VVS-GGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVA 162 (507)
T ss_dssp HGG-GGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHH
T ss_pred hhc-CCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHH
Confidence 332 3457777777999999999998 87654333 34889999999999999973 34678999999999999
Q ss_pred HHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcc--cHHHHHHHHHHHHHHHHHHHHH
Q 042286 183 NALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQ--GVARKMKKLHKRFDVFLSDILE 260 (303)
Q Consensus 183 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~--~~~~~~~~~~~~~~~~~~~~i~ 260 (303)
|+++.++||.+++.. ++....+.+.+..+........+...+|++++++.. ...++..++.+.+.+++.++|+
T Consensus 163 dvi~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (507)
T 3pm0_A 163 NVMSAVCFGCRYSHD-----DPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFL 237 (507)
T ss_dssp HHHHHHHTSCCCCTT-----CHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccCCCC-----CHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998753 334445555555555544444455678888777321 1356777888899999999999
Q ss_pred HHHHcCCCCCCCcCCHHHHHHhcccccCCC------CCCCHHHHhhhc
Q 042286 261 ERKMNGRDGGNKHTDLLGTLISLMDDANGE------EKLTETEIKALL 302 (303)
Q Consensus 261 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~------~~l~~~ei~~~~ 302 (303)
++++..+. +....|+++.|++..++.++. ..+++++|.+++
T Consensus 238 ~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~ 284 (507)
T 3pm0_A 238 RHCESLRP-GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATI 284 (507)
T ss_dssp HHHHHCCT-TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHH
T ss_pred HHHhcccc-ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHH
Confidence 99886544 345789999999654432111 158999988764
No 3
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=3.6e-34 Score=242.16 Aligned_cols=259 Identities=19% Similarity=0.253 Sum_probs=190.7
Q ss_pred HhhccCCCCCCCCCCCCCCcccccCCC-CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCC
Q 042286 26 RNRRRHSSHRLPPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRP 104 (303)
Q Consensus 26 ~~~~~~~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~ 104 (303)
++++.+++.+.||||++ ++++ .++++..+.+|+++|||||++++|+.+.|+|+||+++++|+.++...|.+++
T Consensus 20 ~~~~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~ 93 (496)
T 3qz1_A 20 WGRWKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93 (496)
T ss_dssp ---------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCC
T ss_pred HhhhhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCC
Confidence 43445566789999986 3444 6789999999999999999999999999999999999999998877888776
Q ss_pred CcccccccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHH
Q 042286 105 PNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNA 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~v 184 (303)
..........+..+++++++|+.|+++|++++ +.|+...++.+.+.+.++++.+++.+....|+++|+.+++..+++|+
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dv 172 (496)
T 3qz1_A 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSI 172 (496)
T ss_dssp CCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHH
T ss_pred CcchHHHhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHH
Confidence 65443333333237777766999999999998 99997777889999999999999999865677999999999999999
Q ss_pred HHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcC--CccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 185 LGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGV--FNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEER 262 (303)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 262 (303)
|+.++||. . +++....+.+.+......... ..+...+|++++++. +..++..++.+.+.+++.++|+++
T Consensus 173 i~~~~fG~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~ 243 (496)
T 3qz1_A 173 ICYLTFGN--K------EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRH 243 (496)
T ss_dssp TTTTSTTC--C------CHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC--C------CChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 1 122344444444443322222 123456788777733 445678888899999999999999
Q ss_pred HHcCCCCCCCcCCHHHHHHhccccc---CCCCCCCHHHHhhhc
Q 042286 263 KMNGRDGGNKHTDLLGTLISLMDDA---NGEEKLTETEIKALL 302 (303)
Q Consensus 263 ~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~ei~~~~ 302 (303)
++..+. ....|+++.|+++..++ ++...++++|+.+++
T Consensus 244 ~~~~~~--~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~ 284 (496)
T 3qz1_A 244 KESMVA--GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSV 284 (496)
T ss_dssp HHSCCS--SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHH
T ss_pred HhhccC--CCccchHHHHHHHHHhccccCCcccccHHHHHHHH
Confidence 987654 34679999999876542 111268999988764
No 4
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.5e-33 Score=233.77 Aligned_cols=262 Identities=21% Similarity=0.344 Sum_probs=194.8
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccccc
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAK 110 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 110 (303)
.++.+.+|||+++|++|+++.+.++++..+.+++++|||||++++|+.++++++||+++++|+.++...|.+++......
T Consensus 12 ~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~ 91 (495)
T 2hi4_A 12 PKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTST 91 (495)
T ss_dssp CTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHH
T ss_pred CCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHH
Confidence 34444559999999999988777788999999999999999999999999999999999999987766787765433222
Q ss_pred ccccCCcceeec-cCChHHHHHHHHHHHhhcCh---hhH---H---HhHHHHHHHHHHHHHHHHh--cCCCcccHHHHHH
Q 042286 111 HIAYNYQDIVFR-PYGPRWRMLRKISSVHLFSG---KAL---D---DYRHVRQEEMAVLARALAS--AGTEPVNLAQRLN 178 (303)
Q Consensus 111 ~~~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~---~~l---~---~~~~~~~~~~~~l~~~l~~--~~~~~~d~~~~~~ 178 (303)
... .+.+++++ ++|+.|+++|++++ ++|+. ..+ + .+.+.+.++++.+++.+.. ..|+++|+.+++.
T Consensus 92 ~~~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~ 169 (495)
T 2hi4_A 92 LIT-DGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVV 169 (495)
T ss_dssp TST-TSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHH
T ss_pred Hhc-CCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHH
Confidence 222 23567776 45999999999998 87643 222 2 6889999999999999974 5567899999999
Q ss_pred HHHHHHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHH
Q 042286 179 LCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDI 258 (303)
Q Consensus 179 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (303)
++++|+|+.++||.+++.. +++...+.+....+............+|++++++. ...++..++.+.+.+++.++
T Consensus 170 ~~~~dvi~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~ 243 (495)
T 2hi4_A 170 VSVANVIGAMCFGQHFPES-----SDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRFLWFLQKT 243 (495)
T ss_dssp HHHHHHHHHHHHGGGSCTT-----CHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCC-----CHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988742 22344444444444433332224456788776632 34566778888999999999
Q ss_pred HHHHHHcCCCCCCCcCCHHHHHHhccccc--CCCCCCCHHHHhhhc
Q 042286 259 LEERKMNGRDGGNKHTDLLGTLISLMDDA--NGEEKLTETEIKALL 302 (303)
Q Consensus 259 i~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~ei~~~~ 302 (303)
|+++++..+. ....|+++.|+++..+. ++...++++||.+++
T Consensus 244 i~~r~~~~~~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 287 (495)
T 2hi4_A 244 VQEHYQDFDK--NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLV 287 (495)
T ss_dssp HHHHHHTCCT--TCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHH
T ss_pred HHHHHHhhcc--cccccHHHHHHHHhhhccCccccCCCHHHHHHHH
Confidence 9999886433 23579999999653221 112268999998764
No 5
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=4.8e-32 Score=228.02 Aligned_cols=259 Identities=23% Similarity=0.294 Sum_probs=195.1
Q ss_pred CCCCCCCCCCCCCCcccccCCC-CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccc
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGA 109 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 109 (303)
+++.+.||||+++|++||++++ .++++..+.+|+++||+||++++|+.++|+|+||+++++|+.++...|.+++.....
T Consensus 6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~ 85 (476)
T 3e6i_A 6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF 85 (476)
T ss_dssp ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence 3456789999999999999988 678899999999999999999999999999999999999999877778776654444
Q ss_pred cccccCCcceeeccCChHHHHHHHHHHHhhcChhhH--HHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHH
Q 042286 110 KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKAL--DDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGR 187 (303)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~ 187 (303)
..... .++++++ |+.|+++|++.. +.|+...+ ..+.+.+.++++.+++.+....|+++|+.+++.++++|+|+.
T Consensus 86 ~~~~~--~~l~~~~-g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~ 161 (476)
T 3e6i_A 86 HAHRD--RGIIFNN-GPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIAD 161 (476)
T ss_dssp GGGTT--SSSTTCC-STTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHH
T ss_pred heecC--CCEEecC-CcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHH
Confidence 33332 2666665 999999999987 87765444 446789999999999999855677899999999999999999
Q ss_pred HHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCC--ccccccc-cccccCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 188 VMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVF--NVGDFVP-ALERLDLQGVARKMKKLHKRFDVFLSDILEERKM 264 (303)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 264 (303)
++||.+++.. ++....+...+...+...... .+...+| +++++ ++..++..++.+.+.+++.++|+++++
T Consensus 162 ~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l--p~~~~~~~~~~~~~~~~~~~~i~~~~~ 234 (476)
T 3e6i_A 162 ILFRKHFDYN-----DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYL--PGSHRKVIKNVAEVKEYVSERVKEHHQ 234 (476)
T ss_dssp HHHSCCCCTT-----CHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTS--CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCC-----CHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998763 223444555555444332221 1223455 45554 344567788889999999999999988
Q ss_pred cCCCCCCCcCCHHHHHHhcccccC--CCCCCCHHHHhhhc
Q 042286 265 NGRDGGNKHTDLLGTLISLMDDAN--GEEKLTETEIKALL 302 (303)
Q Consensus 265 ~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~ei~~~~ 302 (303)
..+. ..+.|+++.|+.+..+++ ++..++++||.+++
T Consensus 235 ~~~~--~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~ 272 (476)
T 3e6i_A 235 SLDP--NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTV 272 (476)
T ss_dssp TCCT--TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHH
T ss_pred cCCC--CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHH
Confidence 7654 346799999997654321 22368999998764
No 6
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=1.2e-32 Score=231.64 Aligned_cols=261 Identities=19% Similarity=0.294 Sum_probs=194.7
Q ss_pred CCCCCCCCCCCCCcccccCCCC-CC--cchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccc
Q 042286 32 SSHRLPPGPKPWPIVGNLPHLG-PM--PHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSG 108 (303)
Q Consensus 32 ~~~~~~pgp~~~p~~g~~~~~~-~~--~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 108 (303)
++.+.||||+++|++|++..+. .. ++..+.+++++||||+++++++.++|+|+||+++++|+.++...|++++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 3456899999999999987762 22 78899999999999999999999999999999999999887667877654332
Q ss_pred ccccccCCcceeeccCChHHHHHHHHHHHhhcChhhH--HHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHH
Q 042286 109 AKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKAL--DDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALG 186 (303)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~ 186 (303)
...+. ++.++++..+|+.|+++|++++ ++|+...+ ..+.+.+.++++.+++.+....|+++|+.+.+.++++|+++
T Consensus 89 ~~~~~-~~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~ 166 (481)
T 3czh_A 89 FMKMT-KMGGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITN 166 (481)
T ss_dssp HHHHH-TTCSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHH
T ss_pred HHhhc-CCCCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHH
Confidence 22222 2235566567999999999998 99976544 56889999999999999985556789999999999999999
Q ss_pred HHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCc--cccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 187 RVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFN--VGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKM 264 (303)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 264 (303)
.++||.+++.. ++....+.+.+........... +...+|++++++. ...++..++.+.+.+++.++|+++++
T Consensus 167 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~ 240 (481)
T 3czh_A 167 LIIFGERFTYE-----DTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASV 240 (481)
T ss_dssp HHHHSSCCCTT-----CHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCCCC-----CHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988642 3344555555555544332211 3345777766532 34566778888999999999999987
Q ss_pred cCCCCCCCcCCHHHHHHhcccccC--CCCCCCHHHHhhhc
Q 042286 265 NGRDGGNKHTDLLGTLISLMDDAN--GEEKLTETEIKALL 302 (303)
Q Consensus 265 ~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~ei~~~~ 302 (303)
+.+. ..+.|+++.|+++..+.+ +...++++||.+++
T Consensus 241 ~~~~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~ 278 (481)
T 3czh_A 241 NRKP--QLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSV 278 (481)
T ss_dssp TCCT--TCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHH
T ss_pred hcCC--CchHHHHHHHHHHHHhcccCccccccHHHHHHHH
Confidence 6433 345799999998654311 12269999998765
No 7
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=5.6e-32 Score=227.40 Aligned_cols=258 Identities=20% Similarity=0.302 Sum_probs=194.8
Q ss_pred CCCCCCCCCCCCcccccCCC-CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccc
Q 042286 33 SHRLPPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKH 111 (303)
Q Consensus 33 ~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 111 (303)
..+.||||+++|++|++..+ .++++..+.+++++|||||++++++.+.|+|+||+++++|+.++...|.+++.......
T Consensus 8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~ 87 (476)
T 2fdv_A 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW 87 (476)
T ss_dssp CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred cCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence 33678999999999999888 57889999999999999999999999999999999999999766667776544322222
Q ss_pred cccCCcceeeccCChHHHHHHHHHHHhhcChhhH--HHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Q 042286 112 IAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKAL--DDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVM 189 (303)
Q Consensus 112 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~ 189 (303)
.. .+.++++++ |+.|+++|++++ ++|+...+ +.+.+.+.++++.+++.+....|+++|+.+++.++++|+++.++
T Consensus 88 ~~-~~~~l~~~~-g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~ 164 (476)
T 2fdv_A 88 VF-KGYGVVFSN-GERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIV 164 (476)
T ss_dssp HH-TTCSSSSCC-HHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred hc-CCCCeEecC-chHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHH
Confidence 22 235677665 999999999998 99988766 78999999999999999985556789999999999999999999
Q ss_pred hcccccCCCCCCCChhHHHHHHHHHHHHHHhcCC--cccccccc-ccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 042286 190 LGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVF--NVGDFVPA-LERLDLQGVARKMKKLHKRFDVFLSDILEERKMNG 266 (303)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 266 (303)
||.+++.. ++....+.+.+.......... .+...+|+ ++++ ++..++..++.+.+.+++.++|++++++.
T Consensus 165 fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 237 (476)
T 2fdv_A 165 FGDRFDYK-----DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL--PGPQQQAFQLLQGLEDFIAKKVEHNQRTL 237 (476)
T ss_dssp HSSCCCTT-----CHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTS--CSHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCcCCCC-----CHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhc--CcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998742 223445555555544322211 12335665 4544 34456677888899999999999998754
Q ss_pred CCCCCCcCCHHHHHHhcccccC--CCCCCCHHHHhhhc
Q 042286 267 RDGGNKHTDLLGTLISLMDDAN--GEEKLTETEIKALL 302 (303)
Q Consensus 267 ~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~ei~~~~ 302 (303)
+. ..+.|+++.|+++..+++ ++..++++||.+++
T Consensus 238 ~~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 273 (476)
T 2fdv_A 238 DP--NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTT 273 (476)
T ss_dssp CT--TSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHH
T ss_pred CC--CCCccHHHHHHHHHHhcccCccccccHHHHHHHH
Confidence 33 345799999998653311 12269999998765
No 8
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1e-31 Score=225.92 Aligned_cols=258 Identities=19% Similarity=0.276 Sum_probs=182.9
Q ss_pred CCCCCCCCCCCCcccccCCC-CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccc
Q 042286 33 SHRLPPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKH 111 (303)
Q Consensus 33 ~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 111 (303)
..+.||||+++|++|+++.+ .++++..+.+++++||+|+++++++.+.|+|+||+++++|+.++...|.+++.......
T Consensus 9 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~ 88 (477)
T 1r9o_A 9 RGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAER 88 (477)
T ss_dssp CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCT
T ss_pred CCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhh
Confidence 33578999999999999887 56788899999999999999999888999999999999999776667776543322222
Q ss_pred cccCCcceeeccCChHHHHHHHHHHHhhcChh--hHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Q 042286 112 IAYNYQDIVFRPYGPRWRMLRKISSVHLFSGK--ALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVM 189 (303)
Q Consensus 112 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~ 189 (303)
.. .+.+++++ +|+.|+++|+++. +.|+.. .++.+.+.+.++++.+++.+....|+++|+.+++..+++|+|+.++
T Consensus 89 ~~-~~~~l~~~-~g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~ 165 (477)
T 1r9o_A 89 AN-RGFGIVFS-NGKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSII 165 (477)
T ss_dssp TT-CTTSSTTC-CHHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHHH
T ss_pred cc-CCCceEec-CChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHH
Confidence 22 23466666 5999999999998 999887 4467899999999999999985456789999999999999999999
Q ss_pred hcccccCCCCCCCChhHHHHHHHHHHHHHHhcCC--cccccccc-ccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 042286 190 LGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVF--NVGDFVPA-LERLDLQGVARKMKKLHKRFDVFLSDILEERKMNG 266 (303)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 266 (303)
||.+++.. ++....+.+.+.......... .+...+|+ ++++ +...++..++.+.+.+++.++|+++++..
T Consensus 166 fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--p~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 238 (477)
T 1r9o_A 166 FHKRFDYK-----DQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF--PGTHNKLLKNVAFMKSYILEKVKEHQESM 238 (477)
T ss_dssp HSCCCCTT-----CHHHHHHHHHHHHHHHHHTCCBC-------CCCSCC--TTCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCcCCCC-----CHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99998742 223344444444444322211 12335665 3433 33345677788899999999999998764
Q ss_pred CCCCCCcCCHHHHHHhccccc--CCCCCCCHHHHhhhc
Q 042286 267 RDGGNKHTDLLGTLISLMDDA--NGEEKLTETEIKALL 302 (303)
Q Consensus 267 ~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~ei~~~~ 302 (303)
+. ..+.|+++.|+.+..++ +....++++||.+++
T Consensus 239 ~~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 274 (477)
T 1r9o_A 239 DM--NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 274 (477)
T ss_dssp CT--TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHH
T ss_pred CC--CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHH
Confidence 33 33579999998653321 112269999998765
No 9
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=1.1e-31 Score=225.75 Aligned_cols=258 Identities=20% Similarity=0.300 Sum_probs=189.1
Q ss_pred CCCCCCCCCCCCcccccCCC-CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccc
Q 042286 33 SHRLPPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKH 111 (303)
Q Consensus 33 ~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 111 (303)
..+.||||+++|++|+++.+ .++++..+.+++++||||+++++++.+.|+|+||+++++|+.++...|.+++.......
T Consensus 8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~ 87 (476)
T 1po5_A 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDP 87 (476)
T ss_dssp -CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCS
T ss_pred CCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHh
Confidence 33678999999999999888 67889999999999999999999999999999999999999776667776553322222
Q ss_pred cccCCcceeeccCChHHHHHHHHHHHhhcChh--hHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Q 042286 112 IAYNYQDIVFRPYGPRWRMLRKISSVHLFSGK--ALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVM 189 (303)
Q Consensus 112 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~ 189 (303)
.. .+.+++++ +|+.|+++|+++. +.|+.. .++.+.+.+.++++.+++.+....|+++|+.+.+.++++|+|+.++
T Consensus 88 ~~-~~~~l~~~-~g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~ 164 (476)
T 1po5_A 88 IF-QGYGVIFA-NGERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIV 164 (476)
T ss_dssp CC-SSCCCCCS-SHHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred hc-CCCceEec-CCcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHH
Confidence 22 23567666 5999999999998 999877 4577899999999999999985556789999999999999999999
Q ss_pred hcccccCCCCCCCChhHHHHHHHHHHHHHHhcCC--cccccccc-ccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 042286 190 LGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVF--NVGDFVPA-LERLDLQGVARKMKKLHKRFDVFLSDILEERKMNG 266 (303)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 266 (303)
||.+++.. ++....+.+.+.......... .+...+|+ ++++ +...++..++.+.+.+++.++|+++++..
T Consensus 165 fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~l--p~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 237 (476)
T 1po5_A 165 FGKRFDYK-----DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF--PGTHRQIYRNLQEINTFIGQSVEKHRATL 237 (476)
T ss_dssp HSSCCCTT-----CHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTS--SCSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCCC-----CHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhc--CcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99988742 222333333333222111101 11234565 4443 33345677788899999999999998754
Q ss_pred CCCCCCcCCHHHHHHhcccccC--CCCCCCHHHHhhhc
Q 042286 267 RDGGNKHTDLLGTLISLMDDAN--GEEKLTETEIKALL 302 (303)
Q Consensus 267 ~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~ei~~~~ 302 (303)
+. ..+.|+++.|+.+..+++ .+..++++||.+++
T Consensus 238 ~~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 273 (476)
T 1po5_A 238 DP--SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTV 273 (476)
T ss_dssp CT--TSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHH
T ss_pred CC--CCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Confidence 33 345799999986543211 12258999988765
No 10
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.98 E-value=4.3e-32 Score=226.79 Aligned_cols=254 Identities=17% Similarity=0.231 Sum_probs=197.2
Q ss_pred CCCCCCCCC-CCcccccCCCCCCcchhHHHHHHhcC-CcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccc
Q 042286 34 HRLPPGPKP-WPIVGNLPHLGPMPHQSIAGLARTHG-PLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKH 111 (303)
Q Consensus 34 ~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 111 (303)
.+.||||++ +|++||++.+.++++.++.+|+++|| +||++++++.++|+|+||+++++++.++...|.+++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 357899665 99999998887788999999999999 9999999999999999999999999887777777654433333
Q ss_pred cccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHH-HHHhcCCCcccHHHHHHHHHHHHHHHHHh
Q 042286 112 IAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLAR-ALASAGTEPVNLAQRLNLCVVNALGRVML 190 (303)
Q Consensus 112 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~-~l~~~~~~~~d~~~~~~~~~~~vi~~~~f 190 (303)
.. |.++++..+|+.|+++|++++ ++|+...++.+.+.+.+++..+++ .+. +.++++|+.+++..+++++++.++|
T Consensus 82 ~~--g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~-~~~~~vd~~~~~~~~~~~~i~~~~f 157 (450)
T 3gw9_A 82 VF--GEGVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANWD-KDEGEINLLEDCSTMIINTACQCLF 157 (450)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHSC-SSEEEEEHHHHHHHHHHHHHHHHHS
T ss_pred Hh--cCCcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHhc-cCCCcccHHHHHHHHHHHHHHHHHc
Confidence 22 346666666999999999998 999999999999999999999999 553 2345799999999999999999999
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 042286 191 GFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGG 270 (303)
Q Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 270 (303)
|.+++... +...+.+.+..+.... ......+|++++++. +..++..++.+.+.+++.++|+++++.....+
T Consensus 158 G~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 228 (450)
T 3gw9_A 158 GEDLRKRL------DARRFAQLLAKMESSL--IPAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKEEEVNKD 228 (450)
T ss_dssp CHHHHHHS------CHHHHHHHHHHHHHTC--CGGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred Ccchhhhh------hhHHHHHHHHHHHhcc--ccchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 99886421 2445555555543222 223456788877643 34566778888999999999998876421112
Q ss_pred CCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 271 NKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 271 ~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
....|+++.|+++..++ +. .++++|+.+++
T Consensus 229 ~~~~d~l~~ll~~~~~~-~~-~l~~~~i~~~~ 258 (450)
T 3gw9_A 229 SSTSDLLSGLLSAVYRD-GT-PMSLHEVCGMI 258 (450)
T ss_dssp CCCCSHHHHHHHCBCTT-SC-BCCHHHHHHHH
T ss_pred CccchHHHHHHHhhccC-CC-CCCHHHHHHHH
Confidence 45689999999876543 33 69999998765
No 11
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.97 E-value=2.6e-31 Score=225.04 Aligned_cols=251 Identities=15% Similarity=0.147 Sum_probs=181.0
Q ss_pred CCCCCCCCCCCCCCcccccCCCC----CCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCc
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHLG----PMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPN 106 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~ 106 (303)
+++.+.||||+++|++||++.+. ...+..+.+|+++||+||++++|+.+.|+++||+++++++.+ ..|.+++..
T Consensus 41 ~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~ 118 (503)
T 3s79_A 41 YEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGS 118 (503)
T ss_dssp ----CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCC
T ss_pred HhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchh
Confidence 34557899999999999988762 245567889999999999999999999999999999999964 356666443
Q ss_pred ccc-cccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHh--cCCCcccHHHHHHHHHHH
Q 042286 107 SGA-KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALAS--AGTEPVNLAQRLNLCVVN 183 (303)
Q Consensus 107 ~~~-~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~~ 183 (303)
... ......+.+++++.+|+.|+++|++++ ++|+...++.+.+.+.+.+.++++.+.. +.++.+|+.+++.++++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~ 197 (503)
T 3s79_A 119 KLGLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLD 197 (503)
T ss_dssp HHHHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHH
T ss_pred hhhhhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHH
Confidence 221 222233457777777999999999998 9999999999999999999999998863 446689999999999999
Q ss_pred HHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 184 ALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERK 263 (303)
Q Consensus 184 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 263 (303)
+++.++||.+++. ++....+.+.+......... ...++.+.+ ..++..++.+.+.+++.++|++++
T Consensus 198 vi~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~ 263 (503)
T 3s79_A 198 TSNTLFLRIPLDE------SAIVVKIQGYFDAWQALLIK---PDIFFKISW-----LYKKYEKSVKDLKDAIEVLIAEKR 263 (503)
T ss_dssp HHHHHHTCCCCCH------HHHHHHHHHHHHHHHHHTTC---CHHHHHSGG-----GTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCcccCc------hhHHHHHHHHHHHHHHHhcC---cHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998752 11223333333332221111 111111122 134667788899999999999887
Q ss_pred HcCCCC--CCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 264 MNGRDG--GNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 264 ~~~~~~--~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+..+.+ .....|+++.|+++.++ + .++++|+.+++
T Consensus 264 ~~~~~~~~~~~~~d~l~~ll~~~~~---~-~l~~~~i~~~~ 300 (503)
T 3s79_A 264 RRISTEEKLEECMDFATELILAEKR---G-DLTRENVNQCI 300 (503)
T ss_dssp HHHHTCTTTTTTCCHHHHHHHHHHT---T-SSCHHHHHHHH
T ss_pred HHhhcccccchHHHHHHHHHHhccc---C-CCCHHHHHHHH
Confidence 754321 12345999999987543 2 58999988764
No 12
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.97 E-value=1.4e-30 Score=218.36 Aligned_cols=252 Identities=16% Similarity=0.225 Sum_probs=183.2
Q ss_pred CCCCCCCCCCcccccCCC-CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccccccc-
Q 042286 35 RLPPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHI- 112 (303)
Q Consensus 35 ~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~- 112 (303)
+.+|||+++|++|+++.+ .++++..+.+|+++|||||+++.++.+.|+|+||+++++|+.+. .|.+... ......
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHH
Confidence 457999999999999887 45788899999999999999999999999999999999999542 3533221 111111
Q ss_pred ccCCcceeec-cCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHh-cCCCcccHHHHHHHHHHHHHHHHHh
Q 042286 113 AYNYQDIVFR-PYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALAS-AGTEPVNLAQRLNLCVVNALGRVML 190 (303)
Q Consensus 113 ~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~-~~~~~~d~~~~~~~~~~~vi~~~~f 190 (303)
...+.+++++ .+|+.|+++|++++ ++|++..++.+.+.+.+++.++++.+.. ..++++|+.+++.++++|+|+.++|
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~f 158 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGF 158 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHc
Confidence 1113466665 46999999999998 9999999999999999999999999974 2356899999999999999999999
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 042286 191 GFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGG 270 (303)
Q Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 270 (303)
|.+++....+ ....+...+...+....... ...|+++++ .....++..++.+.+.+++.++|++|+++.
T Consensus 159 G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---- 227 (470)
T 2ij2_A 159 NYRFNSFYRD----QPHPFITSMVRALDEAMNKL--QRANPDDPA-YDENKRQFQEDIKVMNDLVDKIIADRKASG---- 227 (470)
T ss_dssp SCCCCGGGCS----SCCHHHHHHHHHHHHHHHTC-----CTTSGG-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred CCcccccccC----CCCHHHHHHHHHHHHHHHHH--hhhhhHhhc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 9998754211 22233333333332211110 111344443 223345667778889999999999988763
Q ss_pred CCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 271 NKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 271 ~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
..+.|+++.|+++.++++++ .++++||.+++
T Consensus 228 ~~~~dll~~ll~~~~~~~~~-~ls~~ei~~~~ 258 (470)
T 2ij2_A 228 EQSDDLLTHMLNGKDPETGE-PLDDENIRYQI 258 (470)
T ss_dssp CCCSSHHHHHHHCCCTTTCC-CCCHHHHHHHH
T ss_pred cCchhHHHHHHhccCcccCC-CCCHHHHHHHH
Confidence 33579999999876543343 69999998765
No 13
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.97 E-value=7.3e-31 Score=221.18 Aligned_cols=256 Identities=16% Similarity=0.199 Sum_probs=190.5
Q ss_pred cCCCCCCCCCCCCCCcccccCCC-----CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCC
Q 042286 30 RHSSHRLPPGPKPWPIVGNLPHL-----GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRP 104 (303)
Q Consensus 30 ~~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~ 104 (303)
..++...+|||+++|++|+++.+ .++++..+.+|+++||+||++++|+.+.|+++||+++++|+.++ ..|.+++
T Consensus 19 ~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~ 97 (482)
T 3k9v_A 19 ETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRL 97 (482)
T ss_dssp CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCC
T ss_pred ccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCC
Confidence 35566678999999999998776 24678889999999999999999999999999999999999874 5677765
Q ss_pred Cccc---ccccccCCcceeeccCChHHHHHHHHHHHhhc-ChhhHHHhHHHHHHHHHHHHHHHHh---cCCCcccHHHHH
Q 042286 105 PNSG---AKHIAYNYQDIVFRPYGPRWRMLRKISSVHLF-SGKALDDYRHVRQEEMAVLARALAS---AGTEPVNLAQRL 177 (303)
Q Consensus 105 ~~~~---~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~---~~~~~~d~~~~~ 177 (303)
.... .......+.++++.+ |+.|+++|+.++ +.| +...++.+.+.+.++++.+++.+.. ..|+++|+.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~-~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~ 175 (482)
T 3k9v_A 98 EIKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQ-KKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSEL 175 (482)
T ss_dssp CCHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHH-HHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHH
T ss_pred CchHHHHHHHhcCCCCCceeCC-CchHHHHHHHhh-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHH
Confidence 4321 111222345666665 999999999998 876 7888999999999999999999983 246789999999
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccc--cccccCcccHHHHHHHHHHHHHHHH
Q 042286 178 NLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVP--ALERLDLQGVARKMKKLHKRFDVFL 255 (303)
Q Consensus 178 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (303)
.++++|+|+.++||.+++..+.. .......+.+.+..+...... ...+| +.+++ .....++..++.+.+.+++
T Consensus 176 ~~~t~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l-~~~~~~~~~~~~~~~~~~~ 250 (482)
T 3k9v_A 176 NKWSFESICLVLYEKRFGLLQKE-TEEEALTFITAIKTMMSTFGK---MMVTPVELHKRL-NTKVWQAHTLAWDTIFKSV 250 (482)
T ss_dssp HHHHHHHHHHHHHSCCCCSSSTT-STTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHH-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccCCCCCC-cchHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhc-CCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999765421 112445666666665543322 12223 23333 2234456677778888999
Q ss_pred HHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 256 SDILEERKMNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 256 ~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
.++|++++++... ....|++..++.. + .++++|+.+++
T Consensus 251 ~~~i~~r~~~~~~--~~~~d~l~~ll~~------~-~l~~~ei~~~~ 288 (482)
T 3k9v_A 251 KPCIDNRLQRYSQ--QPGADFLCDIYQQ------D-HLSKKELYAAV 288 (482)
T ss_dssp HHHHHHHHHHTTT--CTTSCHHHHHHHH------T-CCCHHHHHHHH
T ss_pred HHHHHHHHHHhcc--CCchHHHHHHHhc------c-CCCHHHHHHHH
Confidence 9999998876543 3457888888863 1 58999988765
No 14
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.97 E-value=5e-30 Score=215.94 Aligned_cols=263 Identities=26% Similarity=0.403 Sum_probs=187.9
Q ss_pred CCCCCCCCCCCCCCcccccCCC-CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccc
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGA 109 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 109 (303)
.++.++||||+++|++||++++ .++++..+.+|+++|||||++++|+.++|+|+||+++++|+.+++..|.+++.....
T Consensus 6 ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~ 85 (479)
T 3tbg_A 6 SSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT 85 (479)
T ss_dssp ---CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGG
T ss_pred CCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHH
Confidence 3445789999999999999888 678889999999999999999999999999999999999999888888887765554
Q ss_pred ccccc--CCcceeeccCChHHHHHHHHHHHhhcChhhHH--HhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH
Q 042286 110 KHIAY--NYQDIVFRPYGPRWRMLRKISSVHLFSGKALD--DYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNAL 185 (303)
Q Consensus 110 ~~~~~--~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~--~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi 185 (303)
..... .+.+++++.+|+.|+.+|+.+. +.|+...+. .+.+.+......+...+....++.+|+.+.+..+++|++
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (479)
T 3tbg_A 86 QILGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVI 164 (479)
T ss_dssp GGGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHH
T ss_pred HHhccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHH
Confidence 44332 2356777778999999999998 888776664 345666777777777766566778999999999999999
Q ss_pred HHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCc--cccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 186 GRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFN--VGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERK 263 (303)
Q Consensus 186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 263 (303)
+.++||.+++.. ++.................... .....|+..++ ....++.....+...+.+.+.++++.
T Consensus 165 ~~~~fg~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (479)
T 3tbg_A 165 ASLTCGRRFEYD-----DPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLTEHR 237 (479)
T ss_dssp HHHHHSCCCCTT-----CHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCccccc-----chhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999864 2334444444443332222111 11222333332 33344556666777788888888877
Q ss_pred HcCCCCCCCcCCHHHHHHhcccc--cCCCCCCCHHHHhhhc
Q 042286 264 MNGRDGGNKHTDLLGTLISLMDD--ANGEEKLTETEIKALL 302 (303)
Q Consensus 264 ~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~ei~~~~ 302 (303)
+..+. .....|+++.++..... .++...++++++.+++
T Consensus 238 ~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~ 277 (479)
T 3tbg_A 238 MTWDP-AQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVV 277 (479)
T ss_dssp HHCCT-TSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHH
T ss_pred Hhhhc-ccccchhhhhhhhhhhhcccCCccchhhHHHHHHH
Confidence 76554 34567777776654322 1122369999998765
No 15
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.97 E-value=1.6e-31 Score=223.73 Aligned_cols=246 Identities=14% Similarity=0.189 Sum_probs=187.2
Q ss_pred CCCCCCCC-CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccc
Q 042286 35 RLPPGPKP-WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIA 113 (303)
Q Consensus 35 ~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~ 113 (303)
+.||+|++ +|++||++.+.++++.++.+++++|||||++++++.++|+|+||+++++++.++...|.+++.........
T Consensus 11 ~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~ 90 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPV 90 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHH
T ss_pred CCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhcc
Confidence 46788775 89999998887889999999999999999999999999999999999999988777776654332211111
Q ss_pred cCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHhccc
Q 042286 114 YNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVMLGFR 193 (303)
Q Consensus 114 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 193 (303)
.|.+++++.+|+.|+++|++++ ++|+...++.+.+.+.+.+.++++.+. .+..+|+.+.+..+++++++.++||.+
T Consensus 91 -~g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~fG~~ 166 (461)
T 3ld6_A 91 -FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWG--ESGEKNVFEALSELIILTASHCLHGKE 166 (461)
T ss_dssp -HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGC--SEEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred -CCCccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHh--hcCCccHHHHHHHHHHHHHHHHHcCcc
Confidence 1357777777999999999998 999999999999999999999998885 335789999999999999999999998
Q ss_pred ccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Q 042286 194 VFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKH 273 (303)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (303)
++... .+.+......+..... .....+|. +++. ...++..++.+.+.+++.+.|++++++. +..
T Consensus 167 ~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~-~~~~~~~~~~~~l~~~~~~~i~~r~~~~----~~~ 230 (461)
T 3ld6_A 167 IRSQL-------NEKVAQLYADLDGGFS--HAAWLLPG--WLPL-PSFRRRDRAHREIKDIFYKAIQKRRQSQ----EKI 230 (461)
T ss_dssp HHHTC-------CHHHHHHHHHHHTTSS--HHHHHSCT--TSCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCC----CCC
T ss_pred hhhhh-------hhhhhhhhhhhhhhhh--hHHHhhhh--hccC-cHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCC
Confidence 86532 2233333333321111 11112232 2222 3345667788899999999999988763 346
Q ss_pred CCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 274 TDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 274 ~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
.|+++.|+++..++ ++ .++++||.+++
T Consensus 231 ~d~l~~ll~~~~~~-~~-~ls~~ei~~~~ 257 (461)
T 3ld6_A 231 DDILQTLLDATYKD-GR-PLTDDEVAGML 257 (461)
T ss_dssp CSHHHHHHTCBCTT-SC-BCCHHHHHHHH
T ss_pred cchhhhhHHhhhcc-cC-CCCHHHHHHHH
Confidence 79999999877654 43 79999998765
No 16
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.97 E-value=7.6e-32 Score=227.30 Aligned_cols=254 Identities=18% Similarity=0.213 Sum_probs=176.2
Q ss_pred CCCCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHc-cccCCCCCCcccccc
Q 042286 33 SHRLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIH-DSNFSNRPPNSGAKH 111 (303)
Q Consensus 33 ~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~-~~~~~~~~~~~~~~~ 111 (303)
+++.||||+++|++||++.+.++++.++.+|+++||+||++++|+.++|+|+||+++++|+.++ ...|.+++......
T Consensus 12 k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~- 90 (485)
T 3nxu_A 12 KKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG- 90 (485)
T ss_dssp HHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG-
T ss_pred hhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc-
Confidence 3355899999999999998877889999999999999999999999999999999999999876 45676655433222
Q ss_pred cccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHH--hcCCCcccHHHHHHHHHHHHHHHHH
Q 042286 112 IAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALA--SAGTEPVNLAQRLNLCVVNALGRVM 189 (303)
Q Consensus 112 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~--~~~~~~~d~~~~~~~~~~~vi~~~~ 189 (303)
. .+.++++. +|+.|+++|++++ ++|+..+++.+.+.+.+.++.+++.+. ...|+++|+.+++.++++|+|+.++
T Consensus 91 ~--~~~~l~~~-~g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~ 166 (485)
T 3nxu_A 91 F--MKSAISIA-EDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTS 166 (485)
T ss_dssp G--GGGSTTTC-CHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHH
T ss_pred c--cccCcccc-CCcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHH
Confidence 1 12355555 4999999999998 999999999999999999999999997 2457789999999999999999999
Q ss_pred hcccccCCCCCCCChhHHHHHHHHHHHHHHhcC---Cccccccccccc----cCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 190 LGFRVFGDGTGGSDPRADEFKSMVVELMVLAGV---FNVGDFVPALER----LDLQGVARKMKKLHKRFDVFLSDILEER 262 (303)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~l~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 262 (303)
||.+++..+.. ...+.+.+......... ......+|++.+ ++.... .....+.+.++++++++++
T Consensus 167 fG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 238 (485)
T 3nxu_A 167 FGVNIDSLNNP-----QDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF---PREVTNFLRKSVKRMKESR 238 (485)
T ss_dssp HSCCCCGGGCT-----TCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSS---CHHHHHHHHHHHHHHHHHH
T ss_pred cCCccccccCC-----CcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhc---hHHHHHHHHHHHHHHHHHH
Confidence 99999865321 12222222221110000 001122332221 111110 1233445666677777666
Q ss_pred HHcCCCCCCCcCCHHHHHHhcccccC--CCCCCCHHHHhhhc
Q 042286 263 KMNGRDGGNKHTDLLGTLISLMDDAN--GEEKLTETEIKALL 302 (303)
Q Consensus 263 ~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~ei~~~~ 302 (303)
.+.. .....|+++.|+++..+.+ +...++++|+.+++
T Consensus 239 ~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~ 277 (485)
T 3nxu_A 239 LEDT---QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQS 277 (485)
T ss_dssp HHCC------CCCHHHHHHHHHC--------CCCHHHHHHHH
T ss_pred Hhcc---CCCcccHHHHHHHhhhccccccccCCCHHHHHHHH
Confidence 5432 2346799999998654321 12369999998765
No 17
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.96 E-value=6.5e-29 Score=206.89 Aligned_cols=241 Identities=17% Similarity=0.169 Sum_probs=175.8
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccccc
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAK 110 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 110 (303)
.++.+.||||+++|++|+++.+..+++ .+.+++++||+||+++.+|.+.|++++|+++++|+.++...|..+.. ....
T Consensus 8 ~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~~~ 85 (444)
T 2ve3_A 8 LNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP-LSTR 85 (444)
T ss_dssp -CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC-HHHH
T ss_pred CCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh-HHHH
Confidence 445578999999999999877744566 78899999999999998888999999999999999876555553211 1111
Q ss_pred ccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHh
Q 042286 111 HIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVML 190 (303)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~f 190 (303)
... +..++++. +|+.|+++|++++ ++|++.+++.+.+.+.++++.+++.|. .++++|+.+++..+++|+++.++|
T Consensus 86 ~~~-g~~~l~~~-~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~--~~~~vd~~~~~~~~~~~vi~~~~f 160 (444)
T 2ve3_A 86 ILL-GPNALATQ-MGEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWG--KANEVIWYPQLRRMTFDVAATLFM 160 (444)
T ss_dssp HHH-CTTSGGGC-CHHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHH--HSSEEEHHHHHHHHHHHHHHHHHT
T ss_pred HHh-CccccccC-CchHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHHHHc
Confidence 111 11255554 5999999999998 999999999999999999999999986 346899999999999999999999
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 042286 191 GFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGG 270 (303)
Q Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 270 (303)
| +.... + ..+.+.+......... +...+| . ...++..++.+.+.+++.++|++++++.
T Consensus 161 G-~~~~~-------~-~~~~~~~~~~~~~~~~--~~~~~p------~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~---- 218 (444)
T 2ve3_A 161 G-EKVSQ-------N-PQLFPWFETYIQGLFS--LPIPLP------N-TLFGKSQRARALLLAELEKIIKARQQQP---- 218 (444)
T ss_dssp C-HHHHS-------C-TTHHHHHHHHHHHHSS--CCCCST------T-SHHHHHHHHHHHHHHHHHHHHHHHHTSC----
T ss_pred C-CCccc-------H-HHHHHHHHHHHHHHhc--CCccCC------C-cHHHHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 9 33221 1 2233333333222211 111112 1 1234566778889999999999988752
Q ss_pred CCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 271 NKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 271 ~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
....|+++.|+++.+++ ++ .++++|+.+++
T Consensus 219 ~~~~d~l~~ll~~~~~~-~~-~l~~~~i~~~~ 248 (444)
T 2ve3_A 219 PSEEDALGILLAARDDN-NQ-PLSLPELKDQI 248 (444)
T ss_dssp CCCSSHHHHHHHCBCTT-SC-BCCHHHHHHHH
T ss_pred CCccCHHHHHHhccccC-CC-CCCHHHHHHHH
Confidence 34679999999876542 33 69999998765
No 18
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.96 E-value=2.3e-29 Score=210.81 Aligned_cols=249 Identities=14% Similarity=0.202 Sum_probs=185.1
Q ss_pred CCCCCCCCC-CCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccc-
Q 042286 31 HSSHRLPPG-PKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSG- 108 (303)
Q Consensus 31 ~~~~~~~pg-p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~- 108 (303)
.+..+.||| |+++|++||++.+..+++.++.+++++||+||++++++.+.|+|++|+++++++.++...+.++.....
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 445678999 889999999988877889999999999999999999999999999999999999876655544322111
Q ss_pred ccccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHH
Q 042286 109 AKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRV 188 (303)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~ 188 (303)
..... |.++++..+|+.|+.+|+++. +.|+...++.+.+.+.+++..+++.|.. +..+|+.+.+..+++++++.+
T Consensus 87 ~~~~~--g~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~~~~~ 161 (461)
T 3i3k_A 87 TTPVF--GKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHC 161 (461)
T ss_dssp HHHHH--CTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHH
T ss_pred hhhhc--CCeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcCHHHHHHHHHHHHHHHH
Confidence 11112 356777766999999999998 9999999999999999999999998852 346899999999999999999
Q ss_pred HhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 042286 189 MLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRD 268 (303)
Q Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 268 (303)
+||.++.... ...+.+.+..+.... ......+| .|++. ...++..++.+.+.+++.++|+++++..
T Consensus 162 ~~G~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~P--~~l~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 227 (461)
T 3i3k_A 162 LHGKEIRSQL-------NEKVAQLYADLDGGF--SHAAWLLP--GWLPL-PSFRRRDRAHREIKDIFYKAIQKRRQSQ-- 227 (461)
T ss_dssp HTCHHHHHTC-------CHHHHHHHHHHHTTS--SHHHHHSC--TTSCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred HccHhhhhHH-------HHHHHHHHHHHHhcc--ccchhhcc--cccCC-HHHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 9998876431 123333333322111 11112233 23322 3356677888899999999999988763
Q ss_pred CCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 269 GGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 269 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+...|+++.|+++..++ ++ .++++||.+++
T Consensus 228 --~~~~d~l~~ll~~~~~~-~~-~l~~~~i~~~~ 257 (461)
T 3i3k_A 228 --EKIDDILQTLLDATYKD-GR-PLTDDEVAGML 257 (461)
T ss_dssp --CCCCSHHHHHHTCBCTT-SC-BCCHHHHHHHH
T ss_pred --cccccHHHHHHHhhhcc-CC-CCCHHHHHHHH
Confidence 34679999999876543 33 69999998764
No 19
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.96 E-value=2.3e-28 Score=204.23 Aligned_cols=245 Identities=13% Similarity=0.172 Sum_probs=165.3
Q ss_pred CCCCC-CCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccc
Q 042286 35 RLPPG-PKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIA 113 (303)
Q Consensus 35 ~~~pg-p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~ 113 (303)
+.||| |+++|++|++..+..+++..+.+++++||+|+++++++.++++|++|+++++|+.++...|.+++.........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 56888 77899999998877789999999999999999999999999999999999999987655676665432222222
Q ss_pred cCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHhccc
Q 042286 114 YNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVMLGFR 193 (303)
Q Consensus 114 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 193 (303)
+.++ +. +|+.|+++|++++ ++|++.+++.+.+.+.++++.+++.+.. ++++|+.+++..+++|+++.++||.+
T Consensus 84 --g~~~-~~-~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fG~~ 156 (455)
T 2cib_A 84 --GEGV-VF-DASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWGE--AGEIDLLDFFAELTIYTSSACLIGKK 156 (455)
T ss_dssp --C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCS--EEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred --CCcc-cc-CcHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhCC--CCcEeHHHHHHHHHHHHHHHHHcCCC
Confidence 2344 34 4999999999998 9999999999999999999999998752 35799999999999999999999999
Q ss_pred ccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Q 042286 194 VFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKH 273 (303)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (303)
++... + ..+.+.+..+.... ......+|+ ++. ...++..++.+.+.+++.++|++++++... ....
T Consensus 157 ~~~~~----~---~~~~~~~~~~~~~~--~~~~~~~p~---l~~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~~ 222 (455)
T 2cib_A 157 FRDQL----D---GRFAKLYHELERGT--DPLAYVDPY---LPI-ESFRRRDEARNGLVALVADIMNGRIANPPT-DKSD 222 (455)
T ss_dssp HHTTC----C---HHHHHHHHHHHTTC--CGGGGTCTT---CSC-HHHHHHHHHHHHHHHHHHHHHHHHHHCC------C
T ss_pred cchhh----h---HHHHHHHHHHHhhh--hHHHHhccc---CCC-hhHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCc
Confidence 87532 1 34444444443211 112223443 211 233456677888999999999999876432 1123
Q ss_pred CCHHHHHHhcccccCCCCC-CCHHHHhhhc
Q 042286 274 TDLLGTLISLMDDANGEEK-LTETEIKALL 302 (303)
Q Consensus 274 ~d~l~~ll~~~~~~~~~~~-l~~~ei~~~~ 302 (303)
.|+++.|+++.+++ ++ . ++++||.+++
T Consensus 223 ~dll~~ll~~~~~~-~~-~~l~~~~i~~~~ 250 (455)
T 2cib_A 223 RDMLDVLIAVKAET-GT-PRFSADEITGMF 250 (455)
T ss_dssp CCHHHHHHHCBCTT-SS-BSCCHHHHHHHH
T ss_pred ccHHHHHHHhhhhc-CC-CCCCHHHHHHHH
Confidence 49999999876442 33 4 9999998765
No 20
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.96 E-value=2.4e-29 Score=210.98 Aligned_cols=244 Identities=20% Similarity=0.272 Sum_probs=158.7
Q ss_pred CCCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccC-CCCCCccccccc
Q 042286 34 HRLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNF-SNRPPNSGAKHI 112 (303)
Q Consensus 34 ~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~-~~~~~~~~~~~~ 112 (303)
...||||+++|++|+++.+..+++.++.++++ ||||+++++++.++++|+||+++++|+.++ .| .+++........
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~ 98 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL 98 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh
Confidence 45688999999999998887789999999998 999999999999999999999999999875 45 333222222222
Q ss_pred ccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHhcc
Q 042286 113 AYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVMLGF 192 (303)
Q Consensus 113 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~ 192 (303)
.+ ..+++.. +|+.|+++|++++ ++|+...++.+.+.+.+.++.+++.+. .++++|+.+.+..+++++++.++||.
T Consensus 99 ~g-~~~l~~~-dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~--~~~~~d~~~~~~~~~~~vi~~~~~g~ 173 (467)
T 3dbg_A 99 LG-KEGVATA-NGPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQ--PGKTVDATSESFRVAVRVAARCLLRG 173 (467)
T ss_dssp -------------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSC--TTSCEEHHHHHHHHHHHHHHHHHSCS
T ss_pred cC-CCCcccC-CcHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhc--cCCcCcHHHHHHHHHHHHHHHHHhCC
Confidence 21 1455555 5999999999998 999999999999999999999999985 45789999999999999999999999
Q ss_pred cccCCCCCCCChhHHHHHHHHHHHHHHhcCCcccccccc--ccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 042286 193 RVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPA--LERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGG 270 (303)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 270 (303)
+++. .....+...+..+..... ....+|+ +.+++ ....++..++.+.+.+++.++|++++++.
T Consensus 174 ~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---- 238 (467)
T 3dbg_A 174 QYMD-------ERAERLCVALATVFRGMY---RRMVVPLGPLYRLP-LPANRRFNDALADLHLLVDEIIAERRASG---- 238 (467)
T ss_dssp SCCH-------HHHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTCC----
T ss_pred cccc-------hhHHHHHHHHHHHHHHHH---HHhccchhhhhhCC-ChHhHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 8763 134555555555443221 1223332 33332 22345667778889999999999988753
Q ss_pred CCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 271 NKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 271 ~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
....|+++.|+++.+++ ++ .++++||.+++
T Consensus 239 ~~~~dll~~ll~~~~~~-~~-~ls~~ei~~~~ 268 (467)
T 3dbg_A 239 QKPDDLLTALLEAKDDN-GD-PIGEQEIHDQV 268 (467)
T ss_dssp SSCCSHHHHHTTC----------CHHHHHHHH
T ss_pred CCchHHHHHHHhhccCC-CC-CCCHHHHHHHH
Confidence 34679999999876543 33 69999998765
No 21
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.96 E-value=1.2e-27 Score=201.86 Aligned_cols=255 Identities=14% Similarity=0.096 Sum_probs=178.8
Q ss_pred CCCCCCCCCCCCCCcccccCCC-----CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCC
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHL-----GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPP 105 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~ 105 (303)
.++.+.+|||+..++. +++.+ .++++..+.+|+++|||||++++|+.+.|+|+||+++++|+.++. .|++++.
T Consensus 5 ~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~~ 82 (487)
T 3n9y_A 5 PRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERFL 82 (487)
T ss_dssp CBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCCC
T ss_pred CCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCCC
Confidence 4455668999987765 55443 236778899999999999999999999999999999999997654 6777654
Q ss_pred cccc---cccccCCcceeeccCChHHHHHHHHHHHh-hcChhhHHHhHHHHHHHHHHHHHHHHh------cCCCcccHHH
Q 042286 106 NSGA---KHIAYNYQDIVFRPYGPRWRMLRKISSVH-LFSGKALDDYRHVRQEEMAVLARALAS------AGTEPVNLAQ 175 (303)
Q Consensus 106 ~~~~---~~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~~~~~~~~l~~~l~~------~~~~~~d~~~ 175 (303)
.... ......+.+++.. +|+.|+++|++++ + .|+.+.++.+.+.+.++++.+++.+.. ..+.++|+.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~-~g~~w~~~Rr~l~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~ 160 (487)
T 3n9y_A 83 IPPWVAYHQYYQRPIGVLLK-KSAAWKKDRVALN-QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISD 160 (487)
T ss_dssp CHHHHHHHHHTTCCCCGGGC-CHHHHHHHHHHHH-HHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHH
T ss_pred CcHHHHHHHHccccCCCccC-CcHHHHHHHHhcC-cccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHH
Confidence 3221 1112233455555 5999999999998 7 599999999999999999999999873 2245799999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCcccccccc--ccccCcccHHHHHHHHHHHHHH
Q 042286 176 RLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPA--LERLDLQGVARKMKKLHKRFDV 253 (303)
Q Consensus 176 ~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~~~~ 253 (303)
++.++++|+|+.++||.+++.++.. .++....+.+.+..++..... ...+|. ++++ .....++..+..+.+.+
T Consensus 161 ~~~~~t~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~-~~~~~~~~~~~~~~~~~ 235 (487)
T 3n9y_A 161 DLFRFAFESITNVIFGERQGMLEEV-VNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLF-RTKTWKDHVAAWDVIFS 235 (487)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTSSS-CCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHH-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccccCCC-CChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhc-ccHHHHHHHHHHHHHHH
Confidence 9999999999999999999876432 223344555555555443322 122332 2333 12333445555566666
Q ss_pred HHHHHHHHHHHc----CCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 254 FLSDILEERKMN----GRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 254 ~~~~~i~~~~~~----~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
++.+++++++++ ... +....|+++.|++. + .++++||.+++
T Consensus 236 ~~~~~i~~~~~~~~~~~~~-~~~~~d~l~~ll~~------~-~l~~~ei~~~~ 280 (487)
T 3n9y_A 236 KADIYTQNFYWELRQKGSV-HHDYRGILYRLLGD------S-KMSFEDIKANV 280 (487)
T ss_dssp HHHHHHHHHHHHHHHHCCC-CSSCCCHHHHHHHS------C-SSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCc-ccchHHHHHHHHhc------C-CCCHHHHHHHH
Confidence 666666654332 221 23457999999973 1 58999988765
No 22
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.95 E-value=3.2e-27 Score=195.80 Aligned_cols=230 Identities=20% Similarity=0.239 Sum_probs=164.9
Q ss_pred CCCCCCCCCCCCCCcccccC-CCCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCCccc
Q 042286 31 HSSHRLPPGPKPWPIVGNLP-HLGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPPNSG 108 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~-~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 108 (303)
++.++.||||+++|++|++. .+..+++..+.++ ++||||+++++ ++.+.|++++|+++++|+.++ .|.+++....
T Consensus 22 ~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~ 98 (436)
T 2cd8_A 22 RRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST 98 (436)
T ss_dssp ------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred chhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence 44456789999999999975 4467889999999 89999999997 778899999999999999865 5766643111
Q ss_pred cccc---ccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHH
Q 042286 109 AKHI---AYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNA 184 (303)
Q Consensus 109 ~~~~---~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~v 184 (303)
.... ...+.++++. +|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.|....++++|+.+++ ..+++++
T Consensus 99 ~~~~~~~~~~~~~l~~~-dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~v 176 (436)
T 2cd8_A 99 TPLTEAEAALNHNMLES-DPPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITV 176 (436)
T ss_dssp SCCCTTGGGTCCSGGGC-CTTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHH
T ss_pred ccccccccccccccccc-CchHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHH
Confidence 1110 1123455554 5999999999998 9999999999999999999999999974336789999977 5799999
Q ss_pred HHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 185 LGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKM 264 (303)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 264 (303)
++. +||.+.+ +...+.+....+.. . . + + ++..++.+.+.+++.++|+++++
T Consensus 177 i~~-~~G~~~~---------~~~~~~~~~~~~~~---~---~---~-------~---~~~~~~~~~~~~~~~~~i~~r~~ 227 (436)
T 2cd8_A 177 ISE-LLGVPEP---------DRAAFRVWTDAFVF---P---D---D-------P---AQAQTAMAEMSGYLSRLIDSKRG 227 (436)
T ss_dssp HHH-HHTCCGG---------GHHHHHHHHHHHHS---C---S---S-------T---THHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHH-HhCCCHH---------HHHHHHHHHHHHhc---c---C---C-------H---HHHHHHHHHHHHHHHHHHHHHhc
Confidence 998 6998764 33445444444331 0 0 0 0 34567788899999999999876
Q ss_pred cCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 265 NGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 265 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+. ..|+++.|+++.+++ ++ .++++||.+++
T Consensus 228 ~~------~~d~l~~ll~~~~~~-~~-~ls~~ei~~~~ 257 (436)
T 2cd8_A 228 QD------GEDLLSALVRTSDED-GS-RLTSEELLGMA 257 (436)
T ss_dssp SC------CCSHHHHHHHHHHHC-TT-TSCHHHHHHHH
T ss_pred CC------CCCHHHHHHHhhhcc-CC-CCCHHHHHHHH
Confidence 42 459999999876542 33 69999998765
No 23
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.94 E-value=1.4e-25 Score=187.62 Aligned_cols=233 Identities=15% Similarity=0.177 Sum_probs=166.0
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccc-c-cccc--cCCcceeeccCChHH
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSG-A-KHIA--YNYQDIVFRPYGPRW 128 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~-~-~~~~--~~~~~~~~~~~g~~w 128 (303)
.+.++..+.+|+++|||||++++++.+.|+|+||+++++|+.+ ..|.+++.... . .... ..+.+++++.+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 3467888999999999999999999999999999999999964 24555432111 0 1111 123567776679999
Q ss_pred HHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHh--cCCCcccHHHHHHHHHHHHHHHHHhcccccCCCCCCCChhH
Q 042286 129 RMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALAS--AGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRA 206 (303)
Q Consensus 129 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 206 (303)
+++|++++ ++|+..+++.+.+.+.+.++.+++.+.. ..++++|+.+++..+++|+++.++||.+++.... ..
T Consensus 87 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~-----~~ 160 (456)
T 3mdm_A 87 HKQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLG-----AQ 160 (456)
T ss_dssp HHHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGT-----CC
T ss_pred HHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcc-----cc
Confidence 99999998 9999999999999999999999999983 3456899999999999999999999999876532 12
Q ss_pred HHHHHHHHHHHHHhcCCccccccccccccCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhccc
Q 042286 207 DEFKSMVVELMVLAGVFNVGDFVPALERLDL-QGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMD 285 (303)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (303)
..+...+..+...... ...|++++++. ....+...++.+.+.+++.++++++++..+.+...+.|+++.++++.+
T Consensus 161 ~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~ 236 (456)
T 3mdm_A 161 KPLSQAVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEE 236 (456)
T ss_dssp HHHHHHHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcC
Confidence 2333333333322111 01222333311 112345566777888899999998876543322346799999998642
Q ss_pred ccCCCCCCCHHHHhhhc
Q 042286 286 DANGEEKLTETEIKALL 302 (303)
Q Consensus 286 ~~~~~~~l~~~ei~~~~ 302 (303)
+ .++++++.+++
T Consensus 237 ---~--~~~~~~l~~~~ 248 (456)
T 3mdm_A 237 ---G--AQDDEGLLDNF 248 (456)
T ss_dssp ---S--CSSSHHHHHHH
T ss_pred ---C--CCCHHHHHHHH
Confidence 1 57888887754
No 24
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.94 E-value=9.2e-25 Score=180.42 Aligned_cols=226 Identities=12% Similarity=0.033 Sum_probs=164.9
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcC-CcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcc--cccccccCCcce
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHG-PLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNS--GAKHIAYNYQDI 119 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 119 (303)
.|++|+...+..+++.++.+++++|| ||+++..++.+.|++++|++++.++ + ...|.+..... ....+.+ ..++
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~g-~~~l 84 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-D-TDRFQRQNALPKRVQKSLFG-VNAI 84 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-C-TTTEECTTCSCHHHHTTTTC-TTCG
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-c-ccccccccccccchhhhhcc-ccce
Confidence 48999988886789999999999998 9999998889999999999998554 3 23455432211 1111221 1244
Q ss_pred eeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHhcccccCCCC
Q 042286 120 VFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGT 199 (303)
Q Consensus 120 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~ 199 (303)
+ ..+|+.|+++|++++ ++|++..++.+.+.+.+.+.++++.|. .++++|+.+.+..+++++++.+ ||.+++..
T Consensus 85 ~-~~dg~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~--~~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~-- 157 (417)
T 1izo_A 85 Q-GMDGSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWE--KADEVVLFEEAKEILCRVACYW-AGVPLKET-- 157 (417)
T ss_dssp G-GCCHHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHT--TSSEEEHHHHHHHHHHHHHHHH-HTCCCCTT--
T ss_pred e-ecCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHh--cCCCeeHHHHHHHHHHHHHHHH-cCCCCCch--
Confidence 4 445999999999998 999999999999999999999999986 3568999999999999999998 69887642
Q ss_pred CCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Q 042286 200 GGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGT 279 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ 279 (303)
....+.+.+..+...... .. +..++..++.+.+.+++.++|++++++... ....|+++.
T Consensus 158 -----~~~~~~~~~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~~~d~l~~ 216 (417)
T 1izo_A 158 -----EVKERADDFIDMVDAFGA-----VG---------PRHWKGRRARPRAEEWIEVMIEDARAGLLK--TTSGTALHE 216 (417)
T ss_dssp -----THHHHHHHHHHHHHHTTC-----CS---------HHHHHHHHHHHHHHHHHHHHHHHHHTTSSC--CCTTSHHHH
T ss_pred -----HHHHHHHHHHHHHhhccc-----CC---------ccchhHHHHHHHHHHHHHHHHHHHHhhccC--CCcCCHHHH
Confidence 333444433333322110 01 122356678888999999999999876432 235699999
Q ss_pred HHhcccccCCCCCCCHHHHhhh
Q 042286 280 LISLMDDANGEEKLTETEIKAL 301 (303)
Q Consensus 280 ll~~~~~~~~~~~l~~~ei~~~ 301 (303)
|+++.+++ |+ .++++++...
T Consensus 217 ll~~~~~~-g~-~l~~~~~~~~ 236 (417)
T 1izo_A 217 MAFHTQED-GS-QLDSRMAAIE 236 (417)
T ss_dssp HHHCBCTT-SC-BCCHHHHHHH
T ss_pred HHHhcccc-CC-CCCHHHHHHH
Confidence 99875442 43 6888866543
No 25
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.93 E-value=1.3e-24 Score=179.43 Aligned_cols=229 Identities=11% Similarity=0.019 Sum_probs=163.6
Q ss_pred CCCCCCCCcccccCCCCCCcchhHHHHHHhc-CCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcc--cccccc
Q 042286 37 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTH-GPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNS--GAKHIA 113 (303)
Q Consensus 37 ~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~y-G~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~--~~~~~~ 113 (303)
|||| |++|+...+..+++.++.+++++| |||+++..++.+.+++++|++++ ++.+. +.|.+.+... ......
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~ 78 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL 78 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc
Confidence 5665 899998887678999999999999 79999998888999999999986 66543 4566543221 111111
Q ss_pred cCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHhccc
Q 042286 114 YNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVMLGFR 193 (303)
Q Consensus 114 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 193 (303)
+ ..+++. .+|+.|+++|++++ ++|+++.++.+.+.+.+.++++++.|.. ++++|+.+.+..+++++++.+ ||.+
T Consensus 79 g-~~~l~~-~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~--~~~vdl~~~~~~~~~~vi~~~-~G~~ 152 (415)
T 3awm_A 79 G-QGGVQG-LDGETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTR--KGEIVFYDELHEPLTRAVCAW-AGVP 152 (415)
T ss_dssp C-SSSGGG-CCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHH--HSEEEHHHHHHHHHHHHHHHH-HTCC
T ss_pred C-Ccceee-cCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhcc--CCcEeHHHHHHHHHHHHHHHH-cCCC
Confidence 1 134444 45999999999998 9999999999999999999999999974 357999999999999999999 8987
Q ss_pred ccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Q 042286 194 VFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKH 273 (303)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (303)
++.. +...+.+.+..+.. ... . + .+..++..++.+.+.+++.++|++++++... ...
T Consensus 153 ~~~~-------~~~~~~~~~~~~~~---~~~------~---~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~~ 209 (415)
T 3awm_A 153 LPDD-------EAGNRAGELRALFD---AAG------S---A--SPRHLWSRLARRRVDAWAKRIIEGIRAGSIG--SGS 209 (415)
T ss_dssp CCGG-------GHHHHHHHHHHHHH---STT------C---S--SHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC--CCT
T ss_pred CCcc-------hHHHHHHHHHHHHH---Hhc------c---c--CchHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCC
Confidence 7531 23333333333322 110 0 0 1123456778889999999999999886422 235
Q ss_pred CCHHHHHHhcccccCCCCCCCHHHHhhh
Q 042286 274 TDLLGTLISLMDDANGEEKLTETEIKAL 301 (303)
Q Consensus 274 ~d~l~~ll~~~~~~~~~~~l~~~ei~~~ 301 (303)
.|+++.|+++.+++ |+ .++++++.+.
T Consensus 210 ~d~l~~ll~~~~~~-g~-~~~~~~~~~~ 235 (415)
T 3awm_A 210 GTAAYAIAWHRDRH-DD-LLSPHVAAVE 235 (415)
T ss_dssp TSHHHHHHHCBCTT-SC-BCCHHHHHHH
T ss_pred CCHHHHHHhhhhcc-CC-CCCHHHHHHH
Confidence 69999999875432 43 6888876544
No 26
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.93 E-value=1.1e-26 Score=196.05 Aligned_cols=247 Identities=13% Similarity=0.063 Sum_probs=175.7
Q ss_pred CCCCCCCCCCCC-CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcc-c
Q 042286 31 HSSHRLPPGPKP-WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNS-G 108 (303)
Q Consensus 31 ~~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~ 108 (303)
++..+.||||++ +|++|+++.+..+++.++.+++++|||||++++++.++|+|++|+++++++.++. .+....... .
T Consensus 9 ~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~-~~~~~~~~~~~ 87 (491)
T 3v8d_A 9 RRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFHFAL 87 (491)
T ss_dssp CCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCT-TEESSHHHHHH
T ss_pred ccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCC-ccchHHHHHHH
Confidence 455678999998 6999999999899999999999999999999999999999999999999996543 232221111 1
Q ss_pred ccccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHH--hc---CCCcccHHHHHHHHHHH
Q 042286 109 AKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALA--SA---GTEPVNLAQRLNLCVVN 183 (303)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~--~~---~~~~~d~~~~~~~~~~~ 183 (303)
..... +.+.+...+|+.|+++|+.+. ++|++..++.+.+.+.+.+..+++.+. .. .+..+++.+++..++++
T Consensus 88 ~~~~~--g~~~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 164 (491)
T 3v8d_A 88 SAKAF--GHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFE 164 (491)
T ss_dssp HHHHH--TCCCCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHH
T ss_pred HHHhc--CCcccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHH
Confidence 11122 123444445999999999998 999999999999999999999988653 11 23468999999999999
Q ss_pred HHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 184 ALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERK 263 (303)
Q Consensus 184 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 263 (303)
+++..+||.+.+.. ++....+.+.+..+... ...+|.+.+.......++..++.+.+.+++.+.+.+++
T Consensus 165 ~~~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~------~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~ 233 (491)
T 3v8d_A 165 AGYLTIFGRDLTRR-----DTQKAHILNNLDNFKQF------DKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR 233 (491)
T ss_dssp HHHHHHHCBCCSCG-----GGHHHHHHHHHHHHHHH------HHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC
T ss_pred HHHHHHcCcccccc-----chhhhhhHHHHHHHHHH------HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999987642 11333344444333321 12233222211223345677777777777776665443
Q ss_pred HcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 264 MNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 264 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+ ...|+++.++...++. + .++++|+.+++
T Consensus 234 ~-------~~~d~l~~l~~~~~~~--~-~~~~~ei~~~~ 262 (491)
T 3v8d_A 234 E-------SISELISLRMFLNDTL--S-TFDDLEKAKTH 262 (491)
T ss_dssp B-------SCCHHHHHHHHHHHHH--B-CCCHHHHHHHH
T ss_pred c-------cccHHHHHHHHHhhcc--C-CCchHHHHHHH
Confidence 2 3568999999876542 2 58999988764
No 27
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.93 E-value=6.1e-24 Score=174.80 Aligned_cols=225 Identities=14% Similarity=0.143 Sum_probs=160.9
Q ss_pred CCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-CeeEEEecCHHHHHHHHHHcc-ccCCCCCCcccccc--
Q 042286 36 LPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-FVDVVVAASASVAAQFLKIHD-SNFSNRPPNSGAKH-- 111 (303)
Q Consensus 36 ~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~v~~p~~i~~i~~~~~-~~~~~~~~~~~~~~-- 111 (303)
.||||+++|++|++.. +++..+.+|+ +||||+++.++ |.+.++|++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999764 8899999997 59999999874 667778999999999998653 22333332211111
Q ss_pred --cccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhc--CCCcccHHHHHHHHHHHHHHH
Q 042286 112 --IAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASA--GTEPVNLAQRLNLCVVNALGR 187 (303)
Q Consensus 112 --~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~ 187 (303)
...++.+++++ +|+.|+++|++++ ++|++.+++.+.+.+.++++++++.+... .++++|+.+.+...+.++++.
T Consensus 78 ~~~~~~~~~l~~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~ 155 (404)
T 1jfb_A 78 KQAAKAKPTFVDM-DPPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIY 155 (404)
T ss_dssp HHHTTSCCCGGGC-CTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHH
T ss_pred cchhcccCccccc-CchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHH
Confidence 01122345554 5999999999998 99999999999999999999999999733 356899999999999999999
Q ss_pred HHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 042286 188 VMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGR 267 (303)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 267 (303)
.+||.+++. ...+.. ..... .. +. ...++..++.+.+.+++.++|++++++.
T Consensus 156 ~~~G~~~~~---------~~~~~~-~~~~~---~~-----------~~---~~~~~~~~~~~~~~~~~~~~i~~r~~~~- 207 (404)
T 1jfb_A 156 TLLGVPFND---------LEYLTQ-QNAIR---TN-----------GS---STAREASAANQELLDYLAILVEQRLVEP- 207 (404)
T ss_dssp HHHTCCGGG---------HHHHHH-HHHHH---HC-----------TT---SCHHHHHHHHHHHHHHHHHHHHHHHHSC-
T ss_pred HHcCCCHHH---------HHHHHH-HHHHH---hc-----------cC---cchHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 999987742 111211 11111 00 00 1124566778889999999999988752
Q ss_pred CCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 268 DGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 268 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
..|+++.|+++..+ ++ .++++|+.+++
T Consensus 208 -----~~d~l~~ll~~~~~--~~-~l~~~ei~~~~ 234 (404)
T 1jfb_A 208 -----KDDIISKLCTEQVK--PG-NIDKSDAVQIA 234 (404)
T ss_dssp -----CSSHHHHHHHHTTT--TT-SSCHHHHHHHH
T ss_pred -----CCcHHHHHHHhhcc--CC-CCCHHHHHHHH
Confidence 45999999975432 22 69999998765
No 28
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.92 E-value=5.5e-23 Score=169.33 Aligned_cols=224 Identities=14% Similarity=0.145 Sum_probs=164.9
Q ss_pred CCCCCCCCCCcccccCCCCCCcchhHHHHHHhc-CCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCCccccccc
Q 042286 35 RLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTH-GPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHI 112 (303)
Q Consensus 35 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~y-G~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~ 112 (303)
..||+|+++|.+.....+..+++..+.+| ++| |||+++++ ++.+.|+|++|+++++|+.++. |.+++........
T Consensus 5 ~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~ 81 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPAT 81 (412)
T ss_dssp ---CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCCC
T ss_pred CCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCccccccccc
Confidence 45688888886644445678899999999 778 99999997 7889999999999999997642 4444321111111
Q ss_pred -------ccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHH-HHHHH
Q 042286 113 -------AYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNL-CVVNA 184 (303)
Q Consensus 113 -------~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~-~~~~v 184 (303)
...+.++++. +|+.|+++|++++ ++|+...++.+.+.+.+.++.+++.+.. .|+++|+.+.+.. +++++
T Consensus 82 ~~~~~~~~~~~~~l~~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~v 158 (412)
T 2zbx_A 82 SPRFEAVRESPQAFIGL-DPPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLA-AGPTADLVSQFALPVPSMV 158 (412)
T ss_dssp SGGGC----CCCCGGGC-CTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHH
T ss_pred ccccccccccccccccC-CcHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHH
Confidence 0012345554 5999999999999 9999999999999999999999999974 3568999998874 99999
Q ss_pred HHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 185 LGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKM 264 (303)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 264 (303)
++. +||.+.+ ....+...+..++.. ... ++..++.+.+.+++.++|+++++
T Consensus 159 i~~-~~G~~~~---------~~~~~~~~~~~~~~~-----------------~~~--~~~~~~~~~~~~~~~~~i~~r~~ 209 (412)
T 2zbx_A 159 ICR-LLGVPYA---------DHEFFQDASKRLVQS-----------------TDA--QSALTARNDLAGYLDGLITQFQT 209 (412)
T ss_dssp HHH-HHTCCGG---------GHHHHHHHHHHHHHC-----------------SSH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HcCCCHH---------HHHHHHHHHHHHhcc-----------------CcH--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 997 6998764 234444444443320 011 45667788899999999999987
Q ss_pred cCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 265 NGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 265 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+. ..|+++.|+++.++ ++ .++++|+.+++
T Consensus 210 ~~------~~d~l~~ll~~~~~--~~-~ls~~ei~~~~ 238 (412)
T 2zbx_A 210 EP------GAGLVGALVADQLA--NG-EIDREELISTA 238 (412)
T ss_dssp SC------CSSHHHHHHHTTTT--TT-SSCHHHHHHHH
T ss_pred CC------CCCHHHHHHHhccc--CC-CCCHHHHHHHH
Confidence 52 35999999987643 33 69999998765
No 29
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.92 E-value=1e-23 Score=173.34 Aligned_cols=220 Identities=20% Similarity=0.209 Sum_probs=162.3
Q ss_pred CCCCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEE----c-CC-eeEEEecCHHHHHHHH-HHccccCCCCCC
Q 042286 33 SHRLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLR----L-GF-VDVVVAASASVAAQFL-KIHDSNFSNRPP 105 (303)
Q Consensus 33 ~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~----~-~~-~~~v~v~~p~~i~~i~-~~~~~~~~~~~~ 105 (303)
..+.||||+++|+. +..+++..+.+| ++||||++++ + ++ .+.|++++|+++++|+ .++ .|.+++.
T Consensus 8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~ 79 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQ 79 (406)
T ss_dssp CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCC
T ss_pred CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccccc
Confidence 35678999999886 457889999999 9999999999 6 78 8999999999999999 443 3555443
Q ss_pred ccccc-ccc---cCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHH-H
Q 042286 106 NSGAK-HIA---YNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNL-C 180 (303)
Q Consensus 106 ~~~~~-~~~---~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~-~ 180 (303)
..... ... ..+.++++. +|+.|+++|++++ ++|++..++.+.+.+.++++++++.+.. .|+++|+.+.+.. +
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~ 156 (406)
T 1ued_A 80 FTQSKSGAHVEAQFVGQISTY-DPPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEA-EGPSADLQGLFADPV 156 (406)
T ss_dssp C---------CGGGTTCGGGC-CTTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTEEHHHHTHHHH
T ss_pred ccccccccccccccccccccC-CCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHh
Confidence 11110 111 012355554 5999999999998 9999999999999999999999999974 3568999998875 9
Q ss_pred HHHHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHH
Q 042286 181 VVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILE 260 (303)
Q Consensus 181 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 260 (303)
++++++. +||.+.+ +.+.+.+....+.. . . . ..++..++.+.+.+++.++|+
T Consensus 157 ~~~vi~~-~~G~~~~---------~~~~~~~~~~~~~~----~----~------~----~~~~~~~~~~~~~~~~~~~i~ 208 (406)
T 1ued_A 157 GAHALCE-LLGIPRD---------DQREFVRRIRRNAD----L----S------R----GLKARAADSAAFNRYLDNLLA 208 (406)
T ss_dssp HHHHHHH-HHTCCHH---------HHHHHHHHHHHCC-----------------C----CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HcCCCHH---------HHHHHHHHHHHHHh----c----c------C----CHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 6998653 23334443332211 0 0 0 124566788889999999999
Q ss_pred HHHHcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 261 ERKMNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 261 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+++++. ..|+++.|+++. + + .++++|+.+++
T Consensus 209 ~r~~~~------~~d~l~~ll~~~-~---~-~ls~~ei~~~~ 239 (406)
T 1ued_A 209 RQRADP------DDGLLGMIVRDH-G---D-NVTDEELKGLC 239 (406)
T ss_dssp HHHHSC------CSSHHHHHHHHH-G---G-GSCHHHHHHHH
T ss_pred HHHhCC------CCCHHHHHHHhc-C---C-CCCHHHHHHHH
Confidence 988752 369999999865 1 2 58999998765
No 30
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.92 E-value=4.8e-24 Score=176.53 Aligned_cols=238 Identities=13% Similarity=0.108 Sum_probs=164.9
Q ss_pred CCCCCCCCCCCCcccccCCCC-----CCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCC-
Q 042286 33 SHRLPPGPKPWPIVGNLPHLG-----PMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPP- 105 (303)
Q Consensus 33 ~~~~~pgp~~~p~~g~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~- 105 (303)
+++.||| ++|++.... .+++..+.++++ ||||++++. |+.+.|+|++++++++++.+. ..|++++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~ 76 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS 76 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence 4567777 888765441 457888888887 799999997 678999999999999999654 46777654
Q ss_pred cccc---c-c-c---cc----CCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccH
Q 042286 106 NSGA---K-H-I---AY----NYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNL 173 (303)
Q Consensus 106 ~~~~---~-~-~---~~----~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~ 173 (303)
.... . . + .+ .+.++++. +|+.|+++|++++ ++|++..++.+.+.+.++++.+++.+... ++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~-~g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~ 153 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDSLTSM-DPPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLDF-DGECDF 153 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCCGGGC-CTTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHTS-SSEEEH
T ss_pred ccCCcccccchhccccccccccccccccC-ChHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeeh
Confidence 2211 1 1 1 11 12345555 5999999999998 99999999999999999999999999743 357999
Q ss_pred HHH-HHHHHHHHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHH
Q 042286 174 AQR-LNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFD 252 (303)
Q Consensus 174 ~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 252 (303)
.+. ...+++++|+.+ ||.+.+. ...+.+....+...... ....+|+++++ .+...++..++.+.+.
T Consensus 154 ~~~~~~~~~~~vi~~~-fG~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~P~l~~~-~~~~~~~~~~~~~~~~ 220 (428)
T 1cpt_A 154 MTDCALYYPLHVVMTA-LGVPEDD---------EPLMLKLTQDFFGVHEP--DEQAVAAPRQS-ADEAARRFHETIATFY 220 (428)
T ss_dssp HHHTTTTHHHHHHHHH-HTCCGGG---------HHHHHHHHHTTTCC-------------------CHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHH-cCCCHhH---------HHHHHHHHHHHHhcccc--ccccccccccc-chhhHHHHHHHHHHHH
Confidence 855 467999999999 9987752 33344433322211110 11234444433 1233456778888999
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 253 VFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 253 ~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+++.++|++++++. ..|+++.|+++..+ ++ .++++||.+++
T Consensus 221 ~~~~~~i~~r~~~~------~~dll~~ll~~~~~--~~-~ls~~ei~~~~ 261 (428)
T 1cpt_A 221 DYFNGFTVDRRSCP------KDDVMSLLANSKLD--GN-YIDDKYINAYY 261 (428)
T ss_dssp HHHHHHHHHHTTSC------CSSHHHHHHHCBSS--SS-BCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCC------CCcHHHHHHhcccc--CC-CCCHHHHHHHH
Confidence 99999999988642 46999999987542 43 69999998765
No 31
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.90 E-value=4.6e-22 Score=162.50 Aligned_cols=206 Identities=15% Similarity=0.168 Sum_probs=156.9
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcCC----eeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHH
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLGF----VDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRW 128 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~~----~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 128 (303)
..+++..+.+++ +||||++++.++ .+.|+|+||+++++|+. +...|++++........... .+.++..+|+.|
T Consensus 11 ~~~p~~~~~~lr-~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~-~~~~~~~~g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEELQ-KAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRALL-PGILQAYDPPDH 87 (384)
T ss_dssp TTEECHHHHHHH-HTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----CCC-TTCGGGCCTTHH
T ss_pred ccChhHHHHHHH-hcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCcccccccccccc-ccccccCCChhH
Confidence 578999999995 899999999876 89999999999999994 45678887654322221222 244555569999
Q ss_pred HHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHhcccccCCCCCCCChhHHH
Q 042286 129 RMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADE 208 (303)
Q Consensus 129 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~ 208 (303)
+++|++++ ++|++.+++.+.+.+.+.++.+++.+.. .|+++|+.+.+...+.+++...+||.+.+ ....
T Consensus 88 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~v~~~~~G~~~~---------~~~~ 156 (384)
T 3oo3_A 88 TRLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFES-VGAPVDFVRHAAWPIPAYIACEFLGVPRD---------DQAE 156 (384)
T ss_dssp HHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-SCSSEEHHHHTTTHHHHHHHHHHHTCCGG---------GHHH
T ss_pred HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHcCCCHH---------HHHH
Confidence 99999998 9999999999999999999999999964 46789999999988877777778998765 3345
Q ss_pred HHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccC
Q 042286 209 FKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDAN 288 (303)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~ 288 (303)
+.+.+..+.. . ...++..++.+.+.+++.++|++++++. ..|+++.|+++.
T Consensus 157 ~~~~~~~~~~---~----------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~d~l~~ll~~~---- 207 (384)
T 3oo3_A 157 LSRMIRESRE---S----------------RLPRQRTLSGLGIVNYTKRLTSGKRRDP------GDGMIGVIVREH---- 207 (384)
T ss_dssp HHHHHHHHHH---C----------------SCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHH----
T ss_pred HHHHHHHHhc---c----------------CChHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhc----
Confidence 5555554442 0 1124566788889999999999988752 459999999862
Q ss_pred CCCCCCHHHHhhhc
Q 042286 289 GEEKLTETEIKALL 302 (303)
Q Consensus 289 ~~~~l~~~ei~~~~ 302 (303)
++ .++++|+.+++
T Consensus 208 ~~-~l~~~~l~~~~ 220 (384)
T 3oo3_A 208 GA-EISDEELAGLA 220 (384)
T ss_dssp GG-GSCHHHHHHHH
T ss_pred CC-CCCHHHHHHHH
Confidence 22 69999998764
No 32
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.90 E-value=9.4e-22 Score=161.49 Aligned_cols=209 Identities=18% Similarity=0.240 Sum_probs=155.8
Q ss_pred CCCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCC--c-cccccccc--CCcceeeccC
Q 042286 51 HLGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPP--N-SGAKHIAY--NYQDIVFRPY 124 (303)
Q Consensus 51 ~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~ 124 (303)
.+..+++..+.++ ++||||+++++ ++.+.|++++|+++++++.++ .|.+++. . ........ .+.++++. +
T Consensus 16 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~-~ 91 (403)
T 3aba_A 16 SCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQ-D 91 (403)
T ss_dssp SSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTC-C
T ss_pred ccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccC-C
Confidence 3457889999999 88999999997 789999999999999999864 4666532 1 11111111 23455554 5
Q ss_pred ChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCC
Q 042286 125 GPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSD 203 (303)
Q Consensus 125 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~ 203 (303)
|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+.. .++++|+.+.+ ..+++++++. +||.+.+
T Consensus 92 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~-------- 160 (403)
T 3aba_A 92 EPEHTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEA-RGGPVDLVKTFANAVPSMVISD-LFGVPVE-------- 160 (403)
T ss_dssp TTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGG--------
T ss_pred chhHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHH--------
Confidence 999999999999 9999999999999999999999999974 35689998766 4799999998 6998764
Q ss_pred hhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhc
Q 042286 204 PRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISL 283 (303)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~ 283 (303)
..+.+......+. ... .++ ++..++.+.+.+++.++|++++++. ..|+++.|+++
T Consensus 161 -~~~~~~~~~~~~~---~~~-------------~~p--~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~ 215 (403)
T 3aba_A 161 -RRAEFQDIAEAMM---RVD-------------QDA--AATEAAGMRLGGLLYQLVQERRANP------GDDLISALITT 215 (403)
T ss_dssp -GHHHHHHHHHHHS---BSS-------------SCH--HHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHTS
T ss_pred -HHHHHHHHHHHHH---hcc-------------CcH--HHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhh
Confidence 2334444333321 100 011 4566778889999999999998752 35999999987
Q ss_pred ccccCCCCCCCHHHHhhhc
Q 042286 284 MDDANGEEKLTETEIKALL 302 (303)
Q Consensus 284 ~~~~~~~~~l~~~ei~~~~ 302 (303)
.++ ++ .++++|+.+++
T Consensus 216 ~~~--~~-~l~~~ei~~~~ 231 (403)
T 3aba_A 216 EDP--DG-VVDDMFLMNAA 231 (403)
T ss_dssp CCT--TC-CCSHHHHHHHH
T ss_pred ccC--CC-CCCHHHHHHHH
Confidence 542 33 69999998765
No 33
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.90 E-value=3.1e-22 Score=164.55 Aligned_cols=221 Identities=13% Similarity=0.199 Sum_probs=161.9
Q ss_pred CCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEc-CCee-EEEecCHHHHHHHHHHccccCCCCCCcccc---
Q 042286 35 RLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRL-GFVD-VVVAASASVAAQFLKIHDSNFSNRPPNSGA--- 109 (303)
Q Consensus 35 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~-~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~--- 109 (303)
+.+|+|+.+|+.++ ...+++.++.+++ +||||++++. ++.+ .|+|++|+++++|+.+ ..|.+++.....
T Consensus 8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCccc
Confidence 45678777787766 3578999999996 6999999996 5666 9999999999999975 357766533211
Q ss_pred -cc-cccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHH
Q 042286 110 -KH-IAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALG 186 (303)
Q Consensus 110 -~~-~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~ 186 (303)
.. ....+.++++. +|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+.. .++++|+.+.+ ..+++++++
T Consensus 82 ~~~~~~~~~~~l~~~-dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~ 158 (406)
T 1s1f_A 82 LAPHFIPARGAVGFL-DPPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLR-AGPPADLTEAVLSPFPIAVIC 158 (406)
T ss_dssp SSSSCSSCTTSGGGC-CTTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTHHHHHHHH
T ss_pred ccccccccccccccC-CchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHhhHhHHHHHH
Confidence 11 21123566665 5999999999999 9999999999999999999999999973 24589998766 479999999
Q ss_pred HHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 042286 187 RVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNG 266 (303)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 266 (303)
. +||.+.+ ....+......+..... | . ++..++.+.+.+++.++|++++++
T Consensus 159 ~-~~G~~~~---------~~~~~~~~~~~~~~~~~--------~-~---------~~~~~~~~~~~~~~~~~i~~r~~~- 209 (406)
T 1s1f_A 159 E-LMGVPAT---------DRHSMHTWTQLILSSSH--------G-A---------EVSERAKNEMNAYFSDLIGLRSDS- 209 (406)
T ss_dssp H-HHTCCGG---------GHHHHHHHHHHHHHHHT--------T-C---------CCCHHHHTHHHHHHHHHHHTSCCS-
T ss_pred H-HhCCCHH---------HHHHHHHHHHHHHhccC--------C-H---------HHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 9 5998775 23345444444432211 1 0 123456677888899998887654
Q ss_pred CCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 267 RDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 267 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
...|+++.|+++.++ ..++++|+.+++
T Consensus 210 -----~~~d~l~~ll~~~~~----~~ls~~el~~~~ 236 (406)
T 1s1f_A 210 -----AGEDVTSLLGAAVGR----DEITLSEAVGLA 236 (406)
T ss_dssp -----CCCSHHHHHHHHHHT----TSSCHHHHHHHH
T ss_pred -----CCCCHHHHHHHhhcc----cCCCHHHHHHHH
Confidence 245999999987532 269999998765
No 34
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.89 E-value=5.3e-22 Score=164.37 Aligned_cols=213 Identities=16% Similarity=0.220 Sum_probs=159.5
Q ss_pred CCcchhHHHHHHhcCCcEEEEcC-------CeeEEEecCHHHHHHHHHHccccCCCCCCc--c-cccccccCCcceeecc
Q 042286 54 PMPHQSIAGLARTHGPLMYLRLG-------FVDVVVAASASVAAQFLKIHDSNFSNRPPN--S-GAKHIAYNYQDIVFRP 123 (303)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 123 (303)
.+++..+.+|+ +||||+++..+ +.+.|+|++|+++++|+.++ ..|++++.. . ....+...+.++++.
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~- 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVL- 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGC-
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccC-
Confidence 46788889996 58999999886 66899999999999999874 468776532 1 111111113456665
Q ss_pred CChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhc-CCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCC
Q 042286 124 YGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASA-GTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGG 201 (303)
Q Consensus 124 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 201 (303)
+|+.|+++|++++ ++|++..++.+.+.+.+.+..+++.+... .++++|+.+.+ ..+++++++.+ ||.+++
T Consensus 121 dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~------ 192 (435)
T 2wm5_A 121 DDPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKA------ 192 (435)
T ss_dssp CTTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGG------
T ss_pred CcHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHH------
Confidence 4999999999998 99999999999999999999999999743 24589998766 78999999999 999875
Q ss_pred CChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Q 042286 202 SDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLI 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll 281 (303)
..+.+.+....+.... .|.+ . ...++..++.+.+.+++.++|++++++. ..|+++.|+
T Consensus 193 ---~~~~~~~~~~~~~~~~--------~p~~--~---~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll 250 (435)
T 2wm5_A 193 ---DHQRIFHWTNVILGFG--------DPDL--A---TDFDEFMQVSADIGAYATALAEDRRVNH------HDDLTSSLV 250 (435)
T ss_dssp ---GHHHHHHHHHHHHHTT--------CTTS--C---CCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHH
T ss_pred ---HHHHHHHHHHHHhccC--------Ccch--h---hhHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCHHHHHH
Confidence 2344555555444321 1321 1 1134677788899999999999998752 469999999
Q ss_pred hcccccCCCCCCCHHHHhhhc
Q 042286 282 SLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 282 ~~~~~~~~~~~l~~~ei~~~~ 302 (303)
++..+ ++ .++++|+.+++
T Consensus 251 ~~~~~--~~-~ls~~ei~~~~ 268 (435)
T 2wm5_A 251 EAEVD--GE-RLSSREIASFF 268 (435)
T ss_dssp HCCBT--TB-CCCHHHHHHHH
T ss_pred hhhcc--CC-CCCHHHHHHHH
Confidence 87543 33 69999998765
No 35
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.89 E-value=7.7e-23 Score=168.44 Aligned_cols=221 Identities=17% Similarity=0.173 Sum_probs=156.3
Q ss_pred cCCCCCCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccc
Q 042286 30 RHSSHRLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGA 109 (303)
Q Consensus 30 ~~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 109 (303)
..++.+.+|||+. ..+++..+.++++ |||| +.++.+.+++++++++++++.++ ..|++++....
T Consensus 14 ~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~- 77 (411)
T 2jjn_A 14 TLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI- 77 (411)
T ss_dssp ---CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS-
T ss_pred ccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC-
Confidence 3556667788871 2467888999987 9998 45556799999999999999864 46777653221
Q ss_pred cccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHH
Q 042286 110 KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRV 188 (303)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~ 188 (303)
......+.++++. +|+.|+++|++++ ++|++..++.+.+.+.+.++.+++. .++++|+.+.+ ..+++++++.+
T Consensus 78 ~~~~~~~~~~~~~-~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~----~~~~~d~~~~~~~~~~~~vi~~~ 151 (411)
T 2jjn_A 78 EGASPTPGMIHEI-DPPEHRALRKVVS-SAFTPRTISDLEPRIRDVTRSLLAD----AGESFDLVDVLAFPLPVTIVAEL 151 (411)
T ss_dssp TTCCCCTTCGGGC-CTTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHT----SCSEEEHHHHTTTHHHHHHHHHH
T ss_pred CcccccccccccC-CchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHhc----CCCceeHHHHHHHHHHHHHHHHH
Confidence 1111223455555 5999999999998 9999999999999999999999988 24579998554 68999999998
Q ss_pred HhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 042286 189 MLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRD 268 (303)
Q Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 268 (303)
||.+.+..+ . +.+....+..... |. ++ .+...++..++.+.+.+++.++|++++++.
T Consensus 152 -fG~~~~~~~------~---~~~~~~~~~~~~~--------~~--~~-~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~-- 208 (411)
T 2jjn_A 152 -LGLPPMDHE------Q---FGDWSGALVDIQM--------DD--PT-DPALAERIADVLNPLTAYLKARCAERRADP-- 208 (411)
T ss_dssp -HTCCSCCCS------T---TCCHHHHHHHSCC--------SC--TT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--
T ss_pred -cCCCHHHHH------H---HHHHHHHHHhccC--------cc--cc-chHHHHHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 999875421 1 2222333322111 11 11 123345677788899999999999998742
Q ss_pred CCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 269 GGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 269 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
..|+++.|+++..+ ++ .++++|+.+++
T Consensus 209 ----~~d~l~~ll~~~~~--~~-~l~~~el~~~~ 235 (411)
T 2jjn_A 209 ----GDDLISRLVLAEVD--GR-ALDDEEAANFS 235 (411)
T ss_dssp ----CSSHHHHHHHCCBT--TB-CCCHHHHHHHH
T ss_pred ----CCCHHHHHHhcccC--CC-CCCHHHHHHHH
Confidence 46999999987643 33 69999998765
No 36
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.89 E-value=2.4e-22 Score=165.45 Aligned_cols=226 Identities=15% Similarity=0.131 Sum_probs=163.2
Q ss_pred cCCCCCCCCCCCCCCcc--cccCC-----CCCCcchhHHHHHHhcC--CcEEEEcCCeeEEEecCHHHHHHHHHHccccC
Q 042286 30 RHSSHRLPPGPKPWPIV--GNLPH-----LGPMPHQSIAGLARTHG--PLMYLRLGFVDVVVAASASVAAQFLKIHDSNF 100 (303)
Q Consensus 30 ~~~~~~~~pgp~~~p~~--g~~~~-----~~~~~~~~~~~~~~~yG--~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~ 100 (303)
...+.++||||++.|.. +.+-. +..+++..+.+|+ +|| ||++++..| +.+++++++++++++.+ ...|
T Consensus 6 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f 82 (415)
T 2zwu_A 6 IQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHF 82 (415)
T ss_dssp -----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTE
T ss_pred ccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-cccc
Confidence 45667899999998864 43321 2346888899996 699 999998333 68999999999999974 4568
Q ss_pred CCCC-CcccccccccCCcc-eeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-
Q 042286 101 SNRP-PNSGAKHIAYNYQD-IVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL- 177 (303)
Q Consensus 101 ~~~~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~- 177 (303)
++++ ...... ...+.+ +++. +|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+... +++|+.+.+
T Consensus 83 ~~~~~~~~~~~--~~~~~~~l~~~-~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~d~~~~~~ 156 (415)
T 2zwu_A 83 SSECPFIPREA--GEAYDFIPTSM-DPPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRPQ--GQCNFTEDYA 156 (415)
T ss_dssp ETTSCSSSHHH--HHHCCCTTTTC-CTTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGGG--TEEEHHHHTT
T ss_pred CCCcccCCCCc--cccccccCccC-CCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHH
Confidence 7765 221111 111234 5555 5999999999998 99999999999999999999999999743 379999865
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHH
Q 042286 178 NLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSD 257 (303)
Q Consensus 178 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (303)
..+++++++.+ ||.+++ ....+.+....+.. .. .|. +..++.+.+.+++.+
T Consensus 157 ~~~~~~vi~~~-~G~~~~---------~~~~~~~~~~~~~~---~~-----~P~-----------~~~~~~~~~~~~~~~ 207 (415)
T 2zwu_A 157 EPFPIRIFMLL-AGLPEE---------DIPHLKYLTDQMTR---PD-----GSM-----------TFAEAKEALYDYLIP 207 (415)
T ss_dssp THHHHHHHHHH-HTCCGG---------GHHHHHHHHHHHHS---CC-----SSS-----------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCCHH---------HHHHHHHHHHHHHh---cc-----CHH-----------HHHHHHHHHHHHHHH
Confidence 78999999999 999875 23345554444331 10 121 345677788999999
Q ss_pred HHHHHHHcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 258 ILEERKMNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 258 ~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+|++++++. ..|+++.|+++..+ ++ .++++|+.+++
T Consensus 208 ~i~~r~~~~------~~dll~~ll~~~~~--~~-~l~~~~i~~~~ 243 (415)
T 2zwu_A 208 IIEQRRQKP------GTDAISIVANGQVN--GR-PITSDEAKRMC 243 (415)
T ss_dssp HHHHHHHSC------CSSHHHHHHTCEET--TE-ECCHHHHHHHH
T ss_pred HHHHHHhCC------CCCHHHHHHHhhhc--CC-CCCHHHHHHHH
Confidence 999998752 46999999987543 33 69999998765
No 37
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.89 E-value=2e-22 Score=166.92 Aligned_cols=228 Identities=18% Similarity=0.179 Sum_probs=157.0
Q ss_pred CCCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEE--------cCCeeEEEecCHHHHHHHHHHccccCCCCCCc
Q 042286 35 RLPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLR--------LGFVDVVVAASASVAAQFLKIHDSNFSNRPPN 106 (303)
Q Consensus 35 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~--------~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~ 106 (303)
..||+|.++++++.......+++..+.++ ++||||+++. +|+.+.++|++++++++++.+ ...|++++..
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~ 95 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRH-SDVFSSYENG 95 (433)
T ss_dssp --CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHC-TTTEESTTTC
T ss_pred CCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcC-hhhccCCccc
Confidence 45666666666654332246799999999 6799999998 444799999999999999965 4567776543
Q ss_pred cccc--------ccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-
Q 042286 107 SGAK--------HIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL- 177 (303)
Q Consensus 107 ~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~- 177 (303)
.... .....+.+++.. +|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+.. ++++|+...+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~-dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~ 171 (433)
T 3ivy_A 96 VIPRFKNDIAREDIEVQRFVMLNM-DAPHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAA--AGSGDFVEQVS 171 (433)
T ss_dssp SCCCCCTTCCHHHHHGGGGSGGGC-CTTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHH--HCEEEHHHHTT
T ss_pred ccccccccccccccccccCCcccc-ChHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh--CCCeeHHHHHH
Confidence 3221 111223455544 5999999999998 9999999999999999999999999973 3478998887
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHH
Q 042286 178 NLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSD 257 (303)
Q Consensus 178 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (303)
..+++++++.+ ||.+.+ +...+.+....+. ....|.... .+..++.+.+.+++.+
T Consensus 172 ~~~~~~vi~~l-~G~~~~---------~~~~~~~~~~~~~--------~~~~p~~~~-------~~~~~~~~~~~~~~~~ 226 (433)
T 3ivy_A 172 CELPLQAIAGL-LGVPQE---------DRGKLFHWSNEMT--------GNEDPEYAH-------IDPKASSAELIGYAMK 226 (433)
T ss_dssp SHHHHHHHHHH-HTCCHH---------HHHHHHHHHTTCS--------CCCCGGGTT-------CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCCHH---------HHHHHHHHHHHHh--------ccCCchhhh-------HHHHHHHHHHHHHHHH
Confidence 99999999996 896442 2333332222111 112222111 1455677888999999
Q ss_pred HHHHHHHcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 258 ILEERKMNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 258 ~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+|++++++. ..|+++.|+++..+ ++ .++++||.+++
T Consensus 227 ~i~~r~~~~------~~dll~~ll~~~~~--~~-~ls~~ei~~~~ 262 (433)
T 3ivy_A 227 MAEEKAKNP------ADDIVTQLIQADID--GE-KLSDDEFGFFV 262 (433)
T ss_dssp HHHHC-------------CHHHHHSCC----CC-CCCHHHHHHHH
T ss_pred HHHHHhcCC------CCcHHHHHHhhhcC--CC-CCCHHHHHHHH
Confidence 999887642 45999999987654 33 69999998765
No 38
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.89 E-value=1.5e-22 Score=168.42 Aligned_cols=219 Identities=13% Similarity=0.125 Sum_probs=156.4
Q ss_pred cchhHHHHHHhcCCcE--EEE-cCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccc-------------cCCcce
Q 042286 56 PHQSIAGLARTHGPLM--YLR-LGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIA-------------YNYQDI 119 (303)
Q Consensus 56 ~~~~~~~~~~~yG~i~--~~~-~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 119 (303)
++..+.++ ++||||+ ++. .++.+.++|++++++++++.+. ..|++++......... ..+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 78888888 5689999 887 6778999999999999999764 6787766433211110 011244
Q ss_pred eeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCC
Q 042286 120 VFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDG 198 (303)
Q Consensus 120 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~ 198 (303)
+. .+|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+... ++++|+.+.+ ..+++++|+.+ ||.+.+
T Consensus 125 ~~-~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~dl~~~~~~~~~~~vi~~l-~G~~~~--- 197 (450)
T 3tkt_A 125 VQ-MDAPKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLGA-GEEGDFMALVAAPYPLHVVMQI-LGVPPE--- 197 (450)
T ss_dssp GG-CCTTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHHT-CSEEEHHHHTTTHHHHHHHHHH-TTCCGG---
T ss_pred cc-CCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEeeHHHHHHHHHHHHHHHH-cCCChh---
Confidence 44 45999999999998 99999999999999999999999999743 6789998887 69999999996 997654
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCCcccccccccccc-CcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Q 042286 199 TGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERL-DLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLL 277 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l 277 (303)
+...+.+....+.. .. .....++..++ +.....++..++.+.+.+++.++|++++++. ..|++
T Consensus 198 ------~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll 261 (450)
T 3tkt_A 198 ------DEPKMLFLTQQMFG---GQ-DEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP------TDDVA 261 (450)
T ss_dssp ------GHHHHHHHHHTTSC---CC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHH
T ss_pred ------HHHHHHHHHHHHhc---cc-cchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHH
Confidence 33444444443321 11 11122222222 1223456777888899999999999998763 45999
Q ss_pred HHHHhcccccCCCCCCCHHHHhhhc
Q 042286 278 GTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 278 ~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+.|+++.++ ++ .++++|+.+++
T Consensus 262 ~~ll~~~~~--~~-~ls~~ei~~~~ 283 (450)
T 3tkt_A 262 TVIANAVVD--GE-PMSDRDTAGYY 283 (450)
T ss_dssp HHHHTCEET--TE-ECCHHHHHHHH
T ss_pred HHHHhcccc--CC-CCCHHHHHHHH
Confidence 999987653 33 69999998765
No 39
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.89 E-value=5.4e-22 Score=163.26 Aligned_cols=209 Identities=13% Similarity=0.074 Sum_probs=151.8
Q ss_pred CCCCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCCcccccc---ccc----CCcceee
Q 042286 50 PHLGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKH---IAY----NYQDIVF 121 (303)
Q Consensus 50 ~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~ 121 (303)
..+..+++..+.+| ++||||+++++ ++.+.|+|++|+++++|+.++. |.+++....... ... .+.++++
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIG 96 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTT
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCcccccccccccc
Confidence 34567899999999 88999999997 7889999999999999997642 444432111110 110 1134554
Q ss_pred ccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHH-HHHHHHHHHHHhcccccCCCCC
Q 042286 122 RPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLN-LCVVNALGRVMLGFRVFGDGTG 200 (303)
Q Consensus 122 ~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~~~~~ 200 (303)
. +|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+.. .|+++|+.+.+. .+++++++. +||.+.+
T Consensus 97 ~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~----- 167 (408)
T 3abb_A 97 V-DDPVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLA-KGPGADLVSAFALPVPSVAICE-LLGVPYG----- 167 (408)
T ss_dssp C-CTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSCEEHHHHTTTHHHHHHHHH-HHTCCGG-----
T ss_pred C-CchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHH-----
Confidence 4 6999999999999 9999999999999999999999999974 456899998886 499999997 6998764
Q ss_pred CCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Q 042286 201 GSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTL 280 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~l 280 (303)
+...+......+... ..+ ++..++.+.+.+++.++|++++++. ..|+++.|
T Consensus 168 ----~~~~~~~~~~~~~~~--------~~~-----------~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~l 218 (408)
T 3abb_A 168 ----DHDFFEECSRNFVGA--------ATS-----------AEADAAFGELYTYLHGLVGRKQAEP------EDGLLDEL 218 (408)
T ss_dssp ----GHHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHSC------CSSHHHHH
T ss_pred ----HHHHHHHHHHHHhcc--------cch-----------HHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHH
Confidence 233444444332210 001 2233456778889999999988752 35999999
Q ss_pred HhcccccCCCCCCCHHHHhhhc
Q 042286 281 ISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 281 l~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+++.++ ++ .++++|+.+++
T Consensus 219 l~~~~~--~~-~ls~~ei~~~~ 237 (408)
T 3abb_A 219 IARQLE--EG-DLDHDEVVMIA 237 (408)
T ss_dssp HHHHHT--SS-SCCHHHHHHHH
T ss_pred HhcccC--CC-CCCHHHHHHHH
Confidence 987543 33 69999998765
No 40
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.89 E-value=1.9e-21 Score=160.42 Aligned_cols=209 Identities=14% Similarity=0.146 Sum_probs=157.2
Q ss_pred CCCCCcchhHHHHHHhcCCcEEEEcC-CeeEEEecCHHHHHHHHHHccccCCCCCCcccccccc-------cCCcceeec
Q 042286 51 HLGPMPHQSIAGLARTHGPLMYLRLG-FVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIA-------YNYQDIVFR 122 (303)
Q Consensus 51 ~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 122 (303)
.+..+++..+.+|+++ |||++++++ |.+.|+|++|+++++++.++ .|++++......... ..+.+++..
T Consensus 26 ~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (417)
T 3tyw_A 26 GCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRT 102 (417)
T ss_dssp SSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGC
T ss_pred ccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhc
Confidence 3467999999999998 999999986 58999999999999999865 576643221111111 123455555
Q ss_pred cCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCC
Q 042286 123 PYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGG 201 (303)
Q Consensus 123 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 201 (303)
+|+.|+++|++++ ++|++.+++.+.+.+.+.+..+++.+.. .|+++|+.+.+ ..+++++++.+ ||.+.+..
T Consensus 103 -dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~---- 174 (417)
T 3tyw_A 103 -DAPEHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLA-AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL---- 174 (417)
T ss_dssp -CHHHHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHH-HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT----
T ss_pred -CCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH----
Confidence 5999999999998 9999999999999999999999999975 45679999988 58999999997 99887632
Q ss_pred CChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Q 042286 202 SDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLI 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll 281 (303)
..+......+.. .. + ..++..++.+.+.+++.++|++++++. ..|+++.|+
T Consensus 175 -----~~~~~~~~~~~~---~~------~---------~~~~~~~~~~~l~~~~~~~i~~r~~~~------~~d~l~~ll 225 (417)
T 3tyw_A 175 -----EFFRDVTRISGS---RN------S---------TAEQVSEALGGLFGLLGGLVAERREEP------RDDLISKLV 225 (417)
T ss_dssp -----THHHHHHHHHHS---SS------S---------CTTHHHHHHHHHHHHHHHHHHHHHSSC------CSSHHHHHH
T ss_pred -----HHHHHHHHHHhc---cc------C---------CHHHHHHHHHHHHHHHHHHHHHHhhCC------CCCHHHHHH
Confidence 223333333221 00 0 113566778889999999999988652 469999999
Q ss_pred hcccccCCCCCCCHHHHhhhc
Q 042286 282 SLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 282 ~~~~~~~~~~~l~~~ei~~~~ 302 (303)
++..+ ++ .++++|+.+++
T Consensus 226 ~~~~~--~~-~ls~~el~~~~ 243 (417)
T 3tyw_A 226 TDHLV--PG-NVTTEQLLSTL 243 (417)
T ss_dssp HHTTT--TT-SSCHHHHHHHH
T ss_pred Hhccc--CC-CCCHHHHHHHH
Confidence 87655 22 69999998765
No 41
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.88 E-value=8.2e-22 Score=162.15 Aligned_cols=213 Identities=23% Similarity=0.341 Sum_probs=154.5
Q ss_pred CCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCC--ccc---cc---cccc--CCccee
Q 042286 51 HLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPP--NSG---AK---HIAY--NYQDIV 120 (303)
Q Consensus 51 ~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~--~~~---~~---~~~~--~~~~~~ 120 (303)
.+..+++..+.+| ++||||+++++++.+.|+|++|+++++|+.++. +++++. ... .. .+.. .+.+++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF 88 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence 4457899999999 899999999988889999999999999997643 444321 010 00 0100 123454
Q ss_pred eccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcC-CCcccHHHHHH-HHHHHHHHHHHhcccccCCC
Q 042286 121 FRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAG-TEPVNLAQRLN-LCVVNALGRVMLGFRVFGDG 198 (303)
Q Consensus 121 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~~~ 198 (303)
+ .+|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.|.... |+++|+.+.+. .+++|+++. +||.+.+
T Consensus 89 ~-~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~--- 162 (408)
T 1odo_A 89 T-AYGPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQD--- 162 (408)
T ss_dssp G-CCHHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH---
T ss_pred c-cCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHH---
Confidence 4 45999999999998 999999999999999999999999997433 67899999887 599999996 6998664
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Q 042286 199 TGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLG 278 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~ 278 (303)
....+.+....++.. . . + .++..++.+.+.+++.++|++++++. ..|+++
T Consensus 163 ------~~~~~~~~~~~~~~~---~-----------~--~--~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~ 212 (408)
T 1odo_A 163 ------RRDGFRALVDGVFDT---T-----------L--D--QAEAQANTARLYEVLDQLIAAKRATP------GDDMTS 212 (408)
T ss_dssp ------HHHHHHHHHHHHHCT---T-----------C--C--HHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHH
T ss_pred ------HHHHHHHHHHHHhcc---c-----------C--C--HHHHHHHHHHHHHHHHHHHHHHhhCC------CCCHHH
Confidence 233444444433210 0 0 0 13566778889999999999988752 359999
Q ss_pred HHHhcccccCCCCCCCHHHHhhhc
Q 042286 279 TLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 279 ~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
.|+++.+++++...++++||.+++
T Consensus 213 ~ll~~~~~~~~~~~l~~~ei~~~~ 236 (408)
T 1odo_A 213 LLIAARDDEGDGDRLSPEELRDTL 236 (408)
T ss_dssp HHHHHHCC-----CCCHHHHHHHH
T ss_pred HHHHhcccccccCCCCHHHHHHHH
Confidence 999875431112269999998765
No 42
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.88 E-value=2.9e-21 Score=159.12 Aligned_cols=210 Identities=16% Similarity=0.223 Sum_probs=154.6
Q ss_pred CCCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCCc-cccccccc--CCcceeeccCCh
Q 042286 51 HLGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPPN-SGAKHIAY--NYQDIVFRPYGP 126 (303)
Q Consensus 51 ~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~g~ 126 (303)
.+..+++..+.++ ++||||+++++ ++.+.|+|++|+++++|+.++ .|.+++.. ........ .+.++++. +|+
T Consensus 34 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~-dg~ 109 (417)
T 2y5n_A 34 VHGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSM-DPP 109 (417)
T ss_dssp SSSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGC-CTT
T ss_pred hhccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccC-Cch
Confidence 3457899999999 88999999997 788999999999999999764 36665432 11111111 23455555 599
Q ss_pred HHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHH-HHHHHHHHHHHhcccccCCCCCCCChh
Q 042286 127 RWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLN-LCVVNALGRVMLGFRVFGDGTGGSDPR 205 (303)
Q Consensus 127 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (303)
.|+++|++++ ++|++..++.+.+.+.+.++++++.+... +.++|+.+.+. .+++++++. +||.+.+ .
T Consensus 110 ~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~vdl~~~~~~~~~~~vi~~-~~G~~~~---------~ 177 (417)
T 2y5n_A 110 EHSRLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAAT-GQPADLVAMFARQLPVRVICE-LLGVPSA---------D 177 (417)
T ss_dssp HHHHHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHHH-CSSEEHHHHTTTTHHHHHHHH-HHTCCGG---------G
T ss_pred HHHHHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeeHHHHHHHHhHHHHHHH-HcCCCHH---------H
Confidence 9999999998 99999999999999999999999999732 22799987764 699999998 5998764 2
Q ss_pred HHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhccc
Q 042286 206 ADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMD 285 (303)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (303)
.+.+......+. . . .. .+ .++..++.+.+.+++.++|++++++. ..|+++.|+++.+
T Consensus 178 ~~~~~~~~~~~~---~---~---~~------~~--~~~~~~~~~~l~~~~~~~i~~r~~~~------~~dll~~ll~~~~ 234 (417)
T 2y5n_A 178 HDRFTRWSGAFL---S---T---AE------VT--AEEMQEAAEQAYAYMGDLIDRRRKEP------TDDLVSALVQARD 234 (417)
T ss_dssp HHHHHHHHHTTS---T---T---CC------CC--HHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCB
T ss_pred HHHHHHHHHHHh---c---c---cC------CC--HHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhhhc
Confidence 233333322211 0 0 00 01 24567788889999999999998752 3599999998764
Q ss_pred ccCCCCCCCHHHHhhhc
Q 042286 286 DANGEEKLTETEIKALL 302 (303)
Q Consensus 286 ~~~~~~~l~~~ei~~~~ 302 (303)
+ ++ .++++||.+++
T Consensus 235 ~--~~-~ls~~ei~~~~ 248 (417)
T 2y5n_A 235 Q--QD-SLSEQELLDLA 248 (417)
T ss_dssp T--TB-CCCHHHHHHHH
T ss_pred c--CC-CCCHHHHHHHH
Confidence 3 33 69999998765
No 43
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.88 E-value=1.3e-23 Score=171.91 Aligned_cols=197 Identities=15% Similarity=0.157 Sum_probs=145.1
Q ss_pred CCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCC-CcccccccccCCc
Q 042286 39 GPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRP-PNSGAKHIAYNYQ 117 (303)
Q Consensus 39 gp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~-~~~~~~~~~~~~~ 117 (303)
++..+|++||++.+..+++..+.+++++||||++ ++++.+.++++||+++++|+.++ .|.+++ ......... +.
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~ 77 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GR 77 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CS
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CC
Confidence 4556899999888766789999999999999999 88888999999999999999875 677765 221112222 24
Q ss_pred ceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHhcccccCC
Q 042286 118 DIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGD 197 (303)
Q Consensus 118 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~ 197 (303)
++++. +|+.|+++|++++ ++|++.+++.+.+.+.+.++.+++.+. ++++|+.+++..+++|+++.++||.+++
T Consensus 78 ~l~~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~---~~~~dl~~~~~~~~~~vi~~~~fG~~~~-- 150 (389)
T 1n97_A 78 GLLTD-WGESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR---GEERDLDHEMLALSLRLLGRALFGKPLS-- 150 (389)
T ss_dssp STTTC-CHHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC---SCCEEHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ccccC-CcHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc---CCcCcHHHHHHHHHHHHHHHHHcCCcch--
Confidence 56655 5999999999998 999999999999999999999999885 5689999999999999999999999874
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHH
Q 042286 198 GTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEE 261 (303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 261 (303)
+ .+.+.+..+...... ..++++.+++. ...++..++.+.+.+++.++|++
T Consensus 151 -------~--~~~~~~~~~~~~~~~----~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~i~~ 200 (389)
T 1n97_A 151 -------P--SLAEHALKALDRIMA----QTRSPLALLDL-AAEARFRKDRGALYREAEALIVH 200 (389)
T ss_dssp -------H--HHHHHHHHHHHHHHH----HHHCGGGGGCH-HHHHHHHHHHHHHHHHHGGGTTS
T ss_pred -------H--HHHHHHHHHHHHHHH----HHhhHHHhcCC-chhHHHHHHHHHHHHHHHHHHHH
Confidence 1 344444443332210 01112233321 22345556666677776666543
No 44
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.88 E-value=1.4e-21 Score=160.25 Aligned_cols=208 Identities=16% Similarity=0.162 Sum_probs=156.7
Q ss_pred CCCCCcchhHHHHHHhc--CCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHH
Q 042286 51 HLGPMPHQSIAGLARTH--GPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRW 128 (303)
Q Consensus 51 ~~~~~~~~~~~~~~~~y--G~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 128 (303)
.+..+++.++.+|+++| |||+++..++ +.++|++|+++++++. +.+.|++++........... ...++..+|+.|
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~-~~~~~~~~g~~~ 92 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETGEF-ELMMAGQDDPVH 92 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC----C-CCTTTTCCTTHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCCccc-ccCcccCCchHH
Confidence 34678999999999999 9999999876 5899999999999994 45577776544321221122 233445569999
Q ss_pred HHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCChhHH
Q 042286 129 RMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDPRAD 207 (303)
Q Consensus 129 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~ 207 (303)
+++|++++ ++|++..++.+.+.+.+.+..+++.+.. ++.+|+...+ ..+++++++. +||.+.+ ...
T Consensus 93 ~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~---------~~~ 159 (398)
T 4fb2_A 93 KKYRQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIE--LGEGDAATWLANEIPARLTAI-LLGLPPE---------DGD 159 (398)
T ss_dssp HHHHHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTT--TTEEEHCCCCCTTHHHHHHHH-HTTSCGG---------GHH
T ss_pred HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHH---------HHH
Confidence 99999998 9999999999999999999999999863 3468875544 6899999999 6897664 344
Q ss_pred HHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhccccc
Q 042286 208 EFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDA 287 (303)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~ 287 (303)
.+.+....+.. +. ..++..++.+.+.+++.++|++++++. ..|+++.|+++..+
T Consensus 160 ~~~~~~~~~~~-----------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~~- 213 (398)
T 4fb2_A 160 TYRRWVWAITH-----------VE--------NPEEGAEIFAELVAHARTLIAERRTNP------GNDIMSRVIMSKID- 213 (398)
T ss_dssp HHHHHHHHHHH-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCBT-
T ss_pred HHHHHHHHHhc-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHcccC-
Confidence 55555555442 00 013567788899999999999998752 46999999987653
Q ss_pred CCCCCCCHHHHhhhc
Q 042286 288 NGEEKLTETEIKALL 302 (303)
Q Consensus 288 ~~~~~l~~~ei~~~~ 302 (303)
++ .++++|+.+++
T Consensus 214 -~~-~l~~~~i~~~~ 226 (398)
T 4fb2_A 214 -GE-SLSEDDLIGFF 226 (398)
T ss_dssp -TB-CCCHHHHHHHH
T ss_pred -CC-CCCHHHHHHHH
Confidence 33 69999998765
No 45
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.88 E-value=3.2e-21 Score=158.67 Aligned_cols=208 Identities=16% Similarity=0.162 Sum_probs=153.7
Q ss_pred CCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCCccccc---cc-cc-----CCcc-ee
Q 042286 52 LGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAK---HI-AY-----NYQD-IV 120 (303)
Q Consensus 52 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~---~~-~~-----~~~~-~~ 120 (303)
+..+++..+.+|+ +||||+++++ ++.+.|+|++|+++++++.++ .|.+++...... .. .. .+.+ ++
T Consensus 20 ~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 96 (413)
T 2z36_A 20 CPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLML 96 (413)
T ss_dssp BTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGG
T ss_pred cccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccccccccccccccccccc
Confidence 4578999999998 6899999997 788999999999999999863 576664321111 01 11 2346 55
Q ss_pred eccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHH-HHHHHHHHHHHhcccccCCCC
Q 042286 121 FRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLN-LCVVNALGRVMLGFRVFGDGT 199 (303)
Q Consensus 121 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~~~~ 199 (303)
+. +|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+....++++|+.+.+. .+++++++.+ ||.+.+
T Consensus 97 ~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~---- 169 (413)
T 2z36_A 97 GM-DGAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICEL-LGVPYT---- 169 (413)
T ss_dssp GC-CHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHH-HTCCGG----
T ss_pred cc-CchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHH-hCCCHH----
Confidence 55 5999999999998 99999999999999999999999999733367899987665 6999999995 998764
Q ss_pred CCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Q 042286 200 GGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGT 279 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ 279 (303)
..+.+......+. . . . .+ ++..++.+.+.+++.++|++++++. ..|+++.
T Consensus 170 -----~~~~~~~~~~~~~---~-~-----------~-~~---~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ 219 (413)
T 2z36_A 170 -----DHDFFQSRTTMMV---S-R-----------T-SM---EDRRRAFAELRAYIDDLITRKESEP------GDDLFSR 219 (413)
T ss_dssp -----GHHHHHHHHHHTT---C-S-----------S-CH---HHHHHHHHHHHHHHHHHHHHHHSSC------CSSHHHH
T ss_pred -----HHHHHHHHHHHHh---c-c-----------c-Cc---HHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHH
Confidence 2233333222211 0 0 0 01 4566778889999999999988652 4599999
Q ss_pred HHhcccccCCCCCCCHHHHhhhc
Q 042286 280 LISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 280 ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
|+++.++ ++ .++++|+.+++
T Consensus 220 ll~~~~~--~~-~ls~~ei~~~~ 239 (413)
T 2z36_A 220 QIARQRQ--EG-TLDHAGLVSLA 239 (413)
T ss_dssp HHHHHHH--HS-CCCHHHHHHHH
T ss_pred HHHhhcC--CC-CCCHHHHHHHH
Confidence 9987433 33 69999998765
No 46
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.88 E-value=6.2e-21 Score=156.47 Aligned_cols=207 Identities=16% Similarity=0.162 Sum_probs=155.1
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHHHHHH
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLR 132 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 132 (303)
..+++..+.++++ ||||+++. .+.|+|++|+++++++.++ ..|++++... .... .+.++++. +|+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~--~~~~l~~~-~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP--ALPMMIDM-DDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC--CCSSGGGC-CTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccC-Cccc--cccccccc-CchHHHHHH
Confidence 4678899999988 99999764 3789999999999999764 3677765432 1112 23455555 599999999
Q ss_pred HHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHH-HHHHHHHHHHHHHHhcccccCCCCCCCChhHHHHHH
Q 042286 133 KISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQ-RLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKS 211 (303)
Q Consensus 133 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~-~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 211 (303)
++++ ++|++..++.+.+.+.+.+.++++.+.. ++++|+.. .+..+++++++.+ ||.+.+ ....+.+
T Consensus 88 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~---------~~~~~~~ 154 (398)
T 2xkr_A 88 KLVN-AGFTRKRVKDKEASIAALCDTLIDAVCE--RGECDFVRDLAAPLPMAVIGDM-LGVRPE---------QRDMFLR 154 (398)
T ss_dssp HHHG-GGSCHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTHHHHHHHHHH-HTCCGG---------GHHHHHH
T ss_pred HHhh-hhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCccHHHHHHHHHHHHHHHHH-hCCCHH---------HHHHHHH
Confidence 9998 9999999999999999999999999863 24799984 4568999999999 999875 2344555
Q ss_pred HHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCCCC
Q 042286 212 MVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDANGEE 291 (303)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ 291 (303)
....+..... |. + .+...++..++.+.+.+++.++|++++++. ..|+++.|+++..+ ++
T Consensus 155 ~~~~~~~~~~--------~~--~--~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~~--~~- 213 (398)
T 2xkr_A 155 WSDDLVTFLS--------SH--V--SQEDFQITMDAFAAYNDFTRATIAARRADP------TDDLVSVLVSSEVD--GE- 213 (398)
T ss_dssp HHHHHHHHHT--------SC--C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCBT--TB-
T ss_pred HHHHHHhccC--------cc--c--chhhHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhcc--CC-
Confidence 5554443221 11 1 123345677788899999999999998742 46999999987653 33
Q ss_pred CCCHHHHhhhc
Q 042286 292 KLTETEIKALL 302 (303)
Q Consensus 292 ~l~~~ei~~~~ 302 (303)
.++++|+.+++
T Consensus 214 ~ls~~ei~~~~ 224 (398)
T 2xkr_A 214 RLSDDELVMET 224 (398)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 69999998765
No 47
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.88 E-value=7.9e-21 Score=156.24 Aligned_cols=212 Identities=15% Similarity=0.177 Sum_probs=154.6
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCccccc---cc-ccCCcceeeccCChHH
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAK---HI-AYNYQDIVFRPYGPRW 128 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~g~~w 128 (303)
..+++..+.++ ++||||++++.++.+.|++++|+++++++.++ ..|++++...... .. ...+.++++. +|+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQ-NQPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGC-CTTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhc-CCchH
Confidence 46788899888 47999999999999999999999999999876 5677665322111 00 1112355555 59999
Q ss_pred HHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCChhHH
Q 042286 129 RMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDPRAD 207 (303)
Q Consensus 129 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~ 207 (303)
+++|++++ ++|++..++.+.+.+.+.+..+++.+. .++.+|+...+ ..+++++++.+ ||.+.+ ...
T Consensus 89 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~--~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~---------~~~ 155 (404)
T 3ejb_B 89 RRLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQ--GKKKMEVISDFAFPLASFVIANI-IGVPEE---------DRE 155 (404)
T ss_dssp HHHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTT--TTSEEEHHHHTHHHHHHHHHHHH-HTCCGG---------GHH
T ss_pred HHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhh--hcCCcchHHHHHHHHHHHHHHHH-cCCCHH---------HHH
Confidence 99999998 999999999999999999999999986 34578986554 56999999995 898765 334
Q ss_pred HHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhccccc
Q 042286 208 EFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDA 287 (303)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~ 287 (303)
.+.+....+..... .|+. ....++..++.+.+.+++.++|++++++. ..|+++.|+ +..+
T Consensus 156 ~~~~~~~~~~~~~~-------~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll-~~~~- 215 (404)
T 3ejb_B 156 QLKEWAASLIQTID-------FTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRHP------QQDMISMLL-KGRE- 215 (404)
T ss_dssp HHHHHHHHHHGGGS-------TTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHH-HC---
T ss_pred HHHHHHHHHHHhcc-------CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC------cchHHHHHH-hccc-
Confidence 45554444432211 1211 12345677888899999999999998652 469999999 4332
Q ss_pred CCCCCCCHHHHhhhc
Q 042286 288 NGEEKLTETEIKALL 302 (303)
Q Consensus 288 ~~~~~l~~~ei~~~~ 302 (303)
++ .++++|+.+++
T Consensus 216 -~~-~ls~~el~~~~ 228 (404)
T 3ejb_B 216 -KD-KLTEEEAASTC 228 (404)
T ss_dssp ----CCCHHHHHHHH
T ss_pred -CC-CCCHHHHHHHH
Confidence 33 69999998765
No 48
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.87 E-value=5.5e-23 Score=173.52 Aligned_cols=244 Identities=14% Similarity=0.097 Sum_probs=154.9
Q ss_pred CCCCCCCCCCC-CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcc-cc
Q 042286 32 SSHRLPPGPKP-WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNS-GA 109 (303)
Q Consensus 32 ~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~ 109 (303)
...+.||||++ +|++|+++++..+++..+.+++++||+||++++++.++|+|+||+++++|+.++.. +..++... ..
T Consensus 10 ~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~~ 88 (491)
T 3dax_A 10 RQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFATS 88 (491)
T ss_dssp CCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHHH
T ss_pred cCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHHH
Confidence 34467899888 89999998887788999999999999999999999999999999999999975431 22221111 11
Q ss_pred cccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhc-----CCCcccHHHHHHHHHHHH
Q 042286 110 KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASA-----GTEPVNLAQRLNLCVVNA 184 (303)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~-----~~~~~d~~~~~~~~~~~v 184 (303)
.... +.+++...+|+.|+++|+.+. +.|+...++.+.+.+.+.+..+++..... ....+++...+..+++++
T Consensus 89 ~~~~--g~~~~~~~~g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 165 (491)
T 3dax_A 89 AKAF--GHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEA 165 (491)
T ss_dssp HHHH--TCCCCCGGGTSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHH
T ss_pred HHHc--CCCcccccchhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHH
Confidence 1111 234442334899999999998 89999999888888888887777654311 223578999999999999
Q ss_pred HHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCCcccccccccc-ccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 185 LGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALE-RLDLQGVARKMKKLHKRFDVFLSDILEERK 263 (303)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 263 (303)
++.++||.+++.. +.....+......+.. +...+|++. +++. ...++..++.+.+.+.+ ++++.
T Consensus 166 ~~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~---~~~~~ 230 (491)
T 3dax_A 166 GYLTIFGRDLTRR-----DTQKAHILNNLDNFKQ------FDKVFPALVAGLPI-HMFRTAHNAREKLAESL---RHENL 230 (491)
T ss_dssp HHHHHHCBCSTTG-----GGHHHHHHHHHHHHHH------HHHHHHHHHTTCCG-GGSHHHHHHHHHHHHHT---SHHHH
T ss_pred hHHHHcCcccccc-----cchhhhhhHHHHHHHH------HHHHhHHHHHhCCH-hhhhHHHHHHHHHHHHH---HHHHh
Confidence 9999999877532 1111122222221111 122345332 2221 11233444444443332 23333
Q ss_pred HcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhh
Q 042286 264 MNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKAL 301 (303)
Q Consensus 264 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~ 301 (303)
++. ....|+++.+++..++. + .++++++.++
T Consensus 231 ~~~----~~~~d~l~~ll~~~~~~-~--~~~~~~i~~~ 261 (491)
T 3dax_A 231 QKR----ESISELISLRMFLNDTL-S--TFDDLEKAKT 261 (491)
T ss_dssp TTC----BSCCHHHHHHHHHHHHH-B--CCCHHHHHHH
T ss_pred hcc----cchhHHHHHHHHHHHhc-C--CChHHHHHHH
Confidence 321 23679999998765442 2 4788888644
No 49
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.87 E-value=6e-21 Score=156.84 Aligned_cols=208 Identities=20% Similarity=0.223 Sum_probs=155.9
Q ss_pred CCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCc--c----ccc---cc-cc----CCc
Q 042286 52 LGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPN--S----GAK---HI-AY----NYQ 117 (303)
Q Consensus 52 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--~----~~~---~~-~~----~~~ 117 (303)
+..+++..+.++ ++||||+++++++.+.|++++|+++++++.++ .|++++.. . ... .+ .. .+.
T Consensus 12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 356889999999 88999999999889999999999999999865 57776532 1 110 11 00 134
Q ss_pred ceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccC
Q 042286 118 DIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFG 196 (303)
Q Consensus 118 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~ 196 (303)
++++. +|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+.. ++++|+.+.+ ..+++++++.+ ||.+.+.
T Consensus 89 ~l~~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~ 163 (404)
T 1z8o_A 89 NMGTS-DPPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVGD--SGVVDIVDRFAHPLPIKVICEL-LGVDEKY 163 (404)
T ss_dssp SGGGC-CTTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSCS--SSEEEHHHHTTTHHHHHHHHHH-TTCCGGG
T ss_pred ccccC-CCcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCcchHHHHhHHHHHHHHHHH-hCCCHHH
Confidence 55555 5999999999998 9999999999999999999999999863 5689998765 68999999985 9987753
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCH
Q 042286 197 DGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDL 276 (303)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~ 276 (303)
. ..+......+.. . ..| . .++..++.+.+.+++.++|++++++. ..|+
T Consensus 164 ~---------~~~~~~~~~~~~----~----~~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dl 211 (404)
T 1z8o_A 164 R---------GEFGRWSSEILV----M----DPE--------R-AEQRGQAAREVVNFILDLVERRRTEP------GDDL 211 (404)
T ss_dssp T---------TTHHHHHHHHHC----C----CGG--------G-HHHHHHHHHHHHHHHHHHHHHHHHSC------CSSH
T ss_pred H---------HHHHHHHHHHhc----c----CCh--------h-HHHHHHHHHHHHHHHHHHHHHHHhCC------CCCH
Confidence 2 223333333321 1 011 1 34667788889999999999998752 3599
Q ss_pred HHHHHhc-ccccCCCCCCCHHHHhhhc
Q 042286 277 LGTLISL-MDDANGEEKLTETEIKALL 302 (303)
Q Consensus 277 l~~ll~~-~~~~~~~~~l~~~ei~~~~ 302 (303)
++.|+++ .++ ++ .++++|+.+++
T Consensus 212 l~~ll~~~~~~--~~-~l~~~ei~~~~ 235 (404)
T 1z8o_A 212 LSALIRVQDDD--DG-RLSADELTSIA 235 (404)
T ss_dssp HHHHHHCEETT--TE-ECCHHHHHHHH
T ss_pred HHHHHhhhccc--CC-CCCHHHHHHHH
Confidence 9999987 432 33 69999998765
No 50
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.87 E-value=1e-20 Score=155.54 Aligned_cols=207 Identities=20% Similarity=0.257 Sum_probs=154.5
Q ss_pred CCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccc-----cccccCCcceeeccCCh
Q 042286 52 LGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGA-----KHIAYNYQDIVFRPYGP 126 (303)
Q Consensus 52 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~ 126 (303)
+..+++..+.++ ++||||+++++++.+.|+|++|+++++++.++. |++++..... ......+.++++. +|+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~ 93 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILM-DPP 93 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGC-CTT
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccC-Cch
Confidence 457899999999 889999999999999999999999999998653 7776532211 1111123455554 599
Q ss_pred HHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHH-HHHHHHHHHHHHHhcccccCCCCCCCChh
Q 042286 127 RWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQR-LNLCVVNALGRVMLGFRVFGDGTGGSDPR 205 (303)
Q Consensus 127 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (303)
.|+++|++++ ++|++..++.+.+.+.+.++.+++.+.. ++++|+... ...+++++++.+ ||.+.+ .
T Consensus 94 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~~vi~~~-~G~~~~---------~ 160 (411)
T 3a4g_A 94 DHTRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT--DGPVDLMREYAFQIPVQVICEL-LGVPAE---------D 160 (411)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS--SSCEEHHHHTTTTHHHHHHHHH-HTCCGG---------G
T ss_pred HHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHHH-hCCCHH---------H
Confidence 9999999998 9999999999999999999999999863 357999755 468999999975 998765 2
Q ss_pred HHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhccc
Q 042286 206 ADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMD 285 (303)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (303)
...+......+.. . .| + ++..++.+.+.+++.++|++++++. ..|+++.|+++.+
T Consensus 161 ~~~~~~~~~~~~~---~------~p-------~---~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~ 215 (411)
T 3a4g_A 161 RDDFSAWSSVLVD---D------SP-------A---DDKNAAMGKLHGYLSDLLERKRTEP------DDALLSSLLAVSD 215 (411)
T ss_dssp HHHHHHHHHHHTT---S------SC-------T---TTHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCC
T ss_pred HHHHHHHHHHHhc---c------CC-------H---HHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhc
Confidence 3344444333221 0 11 1 1345677888999999999998752 3599999998764
Q ss_pred ccCCCCCCCHHHHhhhc
Q 042286 286 DANGEEKLTETEIKALL 302 (303)
Q Consensus 286 ~~~~~~~l~~~ei~~~~ 302 (303)
++ ++ .++++||.+++
T Consensus 216 ~~-~~-~ls~~ei~~~~ 230 (411)
T 3a4g_A 216 ED-GD-RLSQEELVAMA 230 (411)
T ss_dssp TT-CC-CCCHHHHHHHH
T ss_pred cC-CC-CCCHHHHHHHH
Confidence 22 33 69999998765
No 51
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.87 E-value=5e-21 Score=157.98 Aligned_cols=214 Identities=18% Similarity=0.211 Sum_probs=157.1
Q ss_pred CCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCC-----cc---cccccccC-Ccceeec
Q 042286 52 LGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPP-----NS---GAKHIAYN-YQDIVFR 122 (303)
Q Consensus 52 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~-----~~---~~~~~~~~-~~~~~~~ 122 (303)
+..+++..+.++ ++||||++ + ++.+.|+|++|+++++|+.++. |++++. .. ....+... +.++++.
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGL 98 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccC
Confidence 457899999999 67999999 5 6778999999999999998753 877651 11 11111100 2345555
Q ss_pred cCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHH-HHHHHHHHHHHHHhcccccCCCCCC
Q 042286 123 PYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQR-LNLCVVNALGRVMLGFRVFGDGTGG 201 (303)
Q Consensus 123 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~ 201 (303)
+|+.|+++|++++ ++|++..++.+.+.+.+.+..+++.+.. ++++|+... +..+++++++.+ ||.+.+
T Consensus 99 -~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~------ 167 (419)
T 1q5d_A 99 -PPEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSG--QEEFDVVRDYAEGIPMRAISAL-LKVPAE------ 167 (419)
T ss_dssp -CHHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTT--SSCEETTTTTGGGSHHHHHHHH-TTCCGG------
T ss_pred -CchHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH-hCCCHH------
Confidence 5999999999998 9999999999999999999999999963 237998765 489999999998 998775
Q ss_pred CChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHH
Q 042286 202 SDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHT-DLLGTL 280 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-d~l~~l 280 (303)
....+.+....+...... ..+|+. ....++..++...+.+++.++|++++++. .. |+++.|
T Consensus 168 ---~~~~~~~~~~~~~~~~~~----~~~P~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~~dll~~l 229 (419)
T 1q5d_A 168 ---CDEKFRRFGSATARALGV----GLVPRV-----DEETKTLVASVTEGLALLHGVLDERRRNP------LENDVLTML 229 (419)
T ss_dssp ---GHHHHHHHHHHHHHHTTT----TTSSCC-----CSCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSCHHHHH
T ss_pred ---HHHHHHHHHHHHHHhccc----ccccCC-----hHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCCHHHHH
Confidence 234455555554433221 123321 12235677888899999999999998752 34 999999
Q ss_pred HhcccccCCCCCCCHHHHhhhc
Q 042286 281 ISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 281 l~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+++.++ ++ .++++|+.+++
T Consensus 230 l~~~~~--~~-~l~~~ei~~~~ 248 (419)
T 1q5d_A 230 LQAEAD--GS-RLSTKELVALV 248 (419)
T ss_dssp HHHHHS--ST-TCCHHHHHHHH
T ss_pred Hhhhcc--CC-CCCHHHHHHHH
Confidence 987532 33 69999998765
No 52
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.86 E-value=2.4e-21 Score=159.30 Aligned_cols=206 Identities=17% Similarity=0.163 Sum_probs=150.3
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcCC--eeEEEecCHHHHHHHHHHccccCCCCCCccc----ccccccC-CcceeeccCC
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLGF--VDVVVAASASVAAQFLKIHDSNFSNRPPNSG----AKHIAYN-YQDIVFRPYG 125 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~~--~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~g 125 (303)
.++++..+.+++ +||||+++..++ .+.++|++|+++++|+.+ ..|.+++.... ....... +.++++. +|
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAFA-DQ 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTTC-CT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccccC-Cc
Confidence 466779999998 799999998754 679999999999999975 35766543211 1111111 3455554 59
Q ss_pred hHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHH-HHHHHHHHHHHhcccccCCCCCCCCh
Q 042286 126 PRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLN-LCVVNALGRVMLGFRVFGDGTGGSDP 204 (303)
Q Consensus 126 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (303)
+.|+++|++++ ++|++.+++.+.+.+.+.++++++.+... |+++|+.+.+. .+++++++. +||.+++
T Consensus 102 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~dl~~~~~~~~~~~vi~~-l~G~~~~--------- 169 (411)
T 2dkk_A 102 PDHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILAE-GPPADLVERVLEPFPIAVVSE-VMGVPAA--------- 169 (411)
T ss_dssp THHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHHH-CSCEEHHHHTTTHHHHHHHHH-HHTCCSS---------
T ss_pred hHHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHH-HhCCCHH---------
Confidence 99999999999 99999999999999999999999999743 55899998776 699999999 5998764
Q ss_pred hHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcc
Q 042286 205 RADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLM 284 (303)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~ 284 (303)
....+......+ .. ..+ ..++..++.+.+.+++.++|++++++ ...|+++.|+++
T Consensus 170 ~~~~~~~~~~~~----~~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~------~~~dll~~ll~~- 224 (411)
T 2dkk_A 170 DRERVHSWTRQI----IS-----TSG---------GAEAAERAKRGLYGWITETVRARAGS------EGGDVYSMLGAA- 224 (411)
T ss_dssp HHHHHHHHHGGG----CS-----SCS---------CSHHHHHHHHHHHHHHHHHHHTTTTC------CSSCHHHHHHHH-
T ss_pred HHHHHHHHHHHH----Hh-----ccc---------hHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHHHh-
Confidence 223333222211 10 111 12356677888999999999888754 245999999987
Q ss_pred cccCCCCCCCHHHHhhhc
Q 042286 285 DDANGEEKLTETEIKALL 302 (303)
Q Consensus 285 ~~~~~~~~l~~~ei~~~~ 302 (303)
++ ++ .++++||.+++
T Consensus 225 ~~--~~-~ls~~el~~~~ 239 (411)
T 2dkk_A 225 VG--RG-EVGETEAVGLA 239 (411)
T ss_dssp HH--TT-SSCTTSHHHHH
T ss_pred cC--CC-CCCHHHHHHHH
Confidence 33 43 68999988765
No 53
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.86 E-value=1.4e-20 Score=154.87 Aligned_cols=209 Identities=18% Similarity=0.213 Sum_probs=154.8
Q ss_pred CCCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCC-Ccccc--ccccc--------C-Cc
Q 042286 51 HLGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRP-PNSGA--KHIAY--------N-YQ 117 (303)
Q Consensus 51 ~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~-~~~~~--~~~~~--------~-~~ 117 (303)
.+..+++..+.++ ++||||+++++ ++.+.|++++|+++++++.++. +.+++ ..... ..... . +.
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR 90 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence 3457889999999 89999999997 8899999999999999997643 44433 01100 00000 1 23
Q ss_pred ceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHH-HHHHHHHHHHHhcccccC
Q 042286 118 DIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLN-LCVVNALGRVMLGFRVFG 196 (303)
Q Consensus 118 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~ 196 (303)
++++ .+|+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+.. .++++|+.+.+. .+++++++. +||.+.+
T Consensus 91 ~l~~-~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~- 165 (411)
T 1gwi_A 91 SMLT-VDGAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA-DGGVVDLKAAFAYPLPMYVVAD-LMGIEEA- 165 (411)
T ss_dssp SGGG-CCHHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC-SCCCEEHHHHTTTHHHHHHHHH-HHTCCGG-
T ss_pred cccc-CCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcchHHHHhhHHHHHHHHH-HhCCCHH-
Confidence 5544 45999999999998 9999999999999999999999999863 367899998886 599999996 6998764
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCH
Q 042286 197 DGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDL 276 (303)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~ 276 (303)
....+......++.. . . + .++..++.+.+.+++.++|++++++. ..|+
T Consensus 166 --------~~~~~~~~~~~~~~~---~-----------~--~--~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~ 213 (411)
T 1gwi_A 166 --------RLPRLKVLFEKFFST---Q-----------T--P--PEEVVATLTELASIMTDTVAAKRAAP------GDDL 213 (411)
T ss_dssp --------GHHHHHHHHHHHHCT---T-----------S--C--HHHHHHHHHHHHHHHHHHHHHHHHSC------CSSH
T ss_pred --------HHHHHHHHHHHHhcc---C-----------C--C--hHHHHHHHHHHHHHHHHHHHHHHhCC------CCCH
Confidence 234455444443310 0 0 0 13566778889999999999988752 3699
Q ss_pred HHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 277 LGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 277 l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
++.|+++.++ ++ .++++|+.+++
T Consensus 214 l~~ll~~~~~--~~-~l~~~~i~~~~ 236 (411)
T 1gwi_A 214 TSALIQASEN--GD-HLTDAEIVSTL 236 (411)
T ss_dssp HHHHHHCCBT--TB-CCCHHHHHHHH
T ss_pred HHHHHHhccc--CC-CCCHHHHHHHH
Confidence 9999987643 33 69999998765
No 54
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.86 E-value=4.7e-21 Score=158.98 Aligned_cols=211 Identities=17% Similarity=0.175 Sum_probs=144.0
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHHHHHH
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLR 132 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 132 (303)
..+++.++.++ ++||||+++..++ .++|++|+++++|+.++. .|.+++......... +.+.++..+|+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~--~~~~l~~~dg~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVM--RGPVLAQMHGKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSC--C-------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccccccc--CCCccccCCcHHHHHHH
Confidence 45788888887 5799999987665 899999999999998754 477765443333222 22334444599999999
Q ss_pred HHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHH-HHHHHHHHHHHHHHHhcccccCCCCCCCChhHHHHHH
Q 042286 133 KISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLA-QRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKS 211 (303)
Q Consensus 133 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 211 (303)
++++ ++|++..++.+.+.+.+.++++++.|. .++.+|+. +....+++++++. +||.+.+ +...+.+
T Consensus 126 r~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~--~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~---------~~~~~~~ 192 (441)
T 3nc3_A 126 RIVV-RSFIGDALDHLSPLIKQNAENLLAPYL--ERGKSDLVNDFGKTFAVCVTMD-MLGLDKR---------DHEKISE 192 (441)
T ss_dssp HHHH-HHHHHTHHHHHHHHHHHHHHHHHTTTT--TTTEEECCCCCHHHHHHHHHHH-HTTCCGG---------GHHHHHH
T ss_pred HHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHHHH-HcCCCHH---------HHHHHHH
Confidence 9998 999999999999999999999999886 34578874 4555699999999 4898764 3455556
Q ss_pred HHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCCCC
Q 042286 212 MVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDANGEE 291 (303)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ 291 (303)
....+......... .....++..++.+.+.+++.++|++++++ ...|+++.|+++.++ ++
T Consensus 193 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~------~~~Dll~~Ll~~~~~--~~- 252 (441)
T 3nc3_A 193 WHSGVADFITSISQ-----------SPEARAHSLWCSEQLSQYLMPVIKERRVN------PGSDLISILCTSEYE--GM- 252 (441)
T ss_dssp HHHHHHHHHHCSCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCSSHHHHHCC---------
T ss_pred HHHHHHHhcccccC-----------ChHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHHHhhcc--CC-
Confidence 55555543322110 11123456778889999999999998764 246999999987653 33
Q ss_pred CCCHHHHhhhc
Q 042286 292 KLTETEIKALL 302 (303)
Q Consensus 292 ~l~~~ei~~~~ 302 (303)
.++++||.+++
T Consensus 253 ~ls~~el~~~~ 263 (441)
T 3nc3_A 253 ALSDKDILALI 263 (441)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 69999998765
No 55
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.86 E-value=1.2e-20 Score=155.97 Aligned_cols=213 Identities=15% Similarity=0.110 Sum_probs=150.7
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcC--CeeEEEecCHHHHHHHHHHccccCCCCCCc--------c-cccc----c-ccCC
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLG--FVDVVVAASASVAAQFLKIHDSNFSNRPPN--------S-GAKH----I-AYNY 116 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--------~-~~~~----~-~~~~ 116 (303)
..+++..+.++++ ||||+++++| +.+.++|++|+++++|+.++ .|++++.. . .... . ...+
T Consensus 19 ~~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 3578889999875 9999999987 67899999999999999764 67776531 0 0000 1 1112
Q ss_pred cceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhccccc
Q 042286 117 QDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVF 195 (303)
Q Consensus 117 ~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~ 195 (303)
.++++.+ |+.|+++|++++ ++|++..++.+.+.+.+.+.++++.+... | ++|+...+ ..+++++++.+ ||.+.+
T Consensus 96 ~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-g-~~dl~~~~~~~~~~~vi~~~-~G~~~~ 170 (425)
T 2z3t_A 96 NWLVFLD-PPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRAQ-R-RPDLVEGFAAPLPILVISAL-LGIPEE 170 (425)
T ss_dssp TCGGGCC-HHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTTS-S-SCBHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred cccccCC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc-C-CccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 4566654 999999999998 99999999999999999999999999642 3 79998755 78999999998 998775
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCC
Q 042286 196 GDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTD 275 (303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d 275 (303)
+...+.+....+.... ..+| + .+...++..++.+.+.+++.++|++++++. ..|
T Consensus 171 ---------~~~~~~~~~~~~~~~~------~~~~----~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d 224 (425)
T 2z3t_A 171 ---------DHTWLRANAVALQEAS------TTRA----R-DGRGYARAEAASQEFTRYFRREVDRRGGDD------RDD 224 (425)
T ss_dssp ---------GHHHHHHHHHHHHTTC------TTCC----C----HHHHHHHHHHHHHHHHHHHHCC-------------C
T ss_pred ---------HHHHHHHHHHHHHhhc------cccC----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCC
Confidence 2334444444433211 1112 1 112345667788889999999998887642 469
Q ss_pred HHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 276 LLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 276 ~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+++.|+++.++ ++ .++++|+.+++
T Consensus 225 ll~~ll~~~~~--~~-~ls~~el~~~~ 248 (425)
T 2z3t_A 225 LLTLLVRARDT--GS-PLSVDGIVGTC 248 (425)
T ss_dssp HHHHHHHHHHT--TC-CCCHHHHHHHH
T ss_pred HHHHHHHhhcc--CC-CCCHHHHHHHH
Confidence 99999987543 33 69999998765
No 56
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.86 E-value=1.9e-20 Score=154.62 Aligned_cols=212 Identities=13% Similarity=0.146 Sum_probs=154.4
Q ss_pred CCCcchhHHHHHHhcC-CcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHHHHH
Q 042286 53 GPMPHQSIAGLARTHG-PLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRML 131 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 131 (303)
..+++.++.++++++| ||+++..++ +.++|++|+++++|+. +.+.|++++...........+.+++. .+|+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~-~dg~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMVPTK-LDPPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCTTTT-CCTTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccCCcc-CCcHHHHHH
Confidence 4588999999988755 899998766 5899999999999995 44577776532211111112234444 459999999
Q ss_pred HHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCChhHHHHH
Q 042286 132 RKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDPRADEFK 210 (303)
Q Consensus 132 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~ 210 (303)
|++++ ++|++..++.+.+.+.+.++.+++.+.. ++.+|+...+ ..++.++++.+ ||.+.+ ....+.
T Consensus 114 R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~~-~G~~~~---------~~~~~~ 180 (421)
T 3lxh_A 114 RKAID-KGLNLAEIRKLEDQIRTIAVEIIEGFAD--RGHCEFGSEFSTVFPVRVFLAL-AGLPVE---------DATKLG 180 (421)
T ss_dssp HHHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTTHHHHHHHHH-HTCCGG---------GHHHHH
T ss_pred HHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHHHHHHHHHH-cCCCHH---------HHHHHH
Confidence 99998 9999999999999999999999999863 3478875555 66888888875 897664 345555
Q ss_pred HHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCCC
Q 042286 211 SMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDANGE 290 (303)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~ 290 (303)
+....+.... ..+| ....++..++.+.+.+++.++|++++++ ...|+++.|+++..+ ++
T Consensus 181 ~~~~~~~~~~------~~~p-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~dll~~ll~~~~~--~~ 239 (421)
T 3lxh_A 181 LLANEMTRPS------GNTP-------EEQGRSLEAANKGFFEYVAPIIAARRGG------SGTDLITRILNVEID--GK 239 (421)
T ss_dssp HHHHHHHSCC------CSSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTC------CCCSHHHHHHTSCBT--TB
T ss_pred HHHHHHhccc------cCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHHhhhcc--CC
Confidence 5555543111 1111 1224567788899999999999998875 256999999987653 43
Q ss_pred CCCCHHHHhhhc
Q 042286 291 EKLTETEIKALL 302 (303)
Q Consensus 291 ~~l~~~ei~~~~ 302 (303)
.++++|+.+++
T Consensus 240 -~l~~~ei~~~~ 250 (421)
T 3lxh_A 240 -PMPDDRALGLV 250 (421)
T ss_dssp -CCCHHHHHHHH
T ss_pred -CCCHHHHHHHH
Confidence 69999998765
No 57
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.85 E-value=2.3e-20 Score=154.21 Aligned_cols=215 Identities=20% Similarity=0.217 Sum_probs=153.4
Q ss_pred CCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccc--------cCCcceeecc
Q 042286 52 LGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIA--------YNYQDIVFRP 123 (303)
Q Consensus 52 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 123 (303)
+..+++.++.+++ +||||+++..| .++|++|+++++++.++ ..+++++......... ..+.++++.+
T Consensus 27 ~~~~p~~~~~~lr-~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 101 (418)
T 3r9b_A 27 TRADPYPIYDRIR-RGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD 101 (418)
T ss_dssp GTTCCHHHHHHHH-HHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCC
T ss_pred hccCchHHHHHHH-hcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcC
Confidence 3689999999985 68999998765 89999999999999753 3344443222111111 1223555555
Q ss_pred CChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCC
Q 042286 124 YGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGS 202 (303)
Q Consensus 124 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~ 202 (303)
|+.|+++|++++ ++|++..++.+.+.+.+.++.+++ +. .++.+|+...+ ..+++++++. +||.+.+
T Consensus 102 -g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~--~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------- 168 (418)
T 3r9b_A 102 -PPDHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AV--DGPEFNLIDNLAYPLPVAVICR-LLGVPIE------- 168 (418)
T ss_dssp -TTHHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TC--CSSEEEHHHHTTTHHHHHHHHH-HHTCCGG-------
T ss_pred -CchHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hh--ccCCeehHHHHhCcCCHHHHHH-HcCCCHH-------
Confidence 999999999998 999999999999999999999999 75 23478976555 6899999999 7998775
Q ss_pred ChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHh
Q 042286 203 DPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLIS 282 (303)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~ 282 (303)
....+......+...... .+.+.++ .....++..++.+.+.+++.++|++++++. ..|+++.|++
T Consensus 169 --~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~------~~d~l~~ll~ 233 (418)
T 3r9b_A 169 --DEPKFSRASALLAAALDP------FLALTGE-TSDLFDEQMKAGMWLRDYLRALIDERRRTP------GEDLMSGLVA 233 (418)
T ss_dssp --GHHHHHHHHHHHHHTTSC------HHHHHSS-CCTTHHHHHHHHHHHHHHHHHHHHHTTTSC------CSSHHHHHHH
T ss_pred --HHHHHHHHHHHHHhhcCc------ccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CccHHHHHHH
Confidence 334455444444322211 1111111 123356778888999999999999887652 5699999998
Q ss_pred cccccCCCCCCCHHHHhhhc
Q 042286 283 LMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 283 ~~~~~~~~~~l~~~ei~~~~ 302 (303)
+.++ ++ .++++|+.+++
T Consensus 234 ~~~~--~~-~ls~~ei~~~~ 250 (418)
T 3r9b_A 234 VEES--GD-QLTEDEIIATC 250 (418)
T ss_dssp HHHH--SS-SCCHHHHHHHH
T ss_pred hhhc--cC-CCCHHHHHHHH
Confidence 7443 33 69999998765
No 58
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.85 E-value=2.6e-21 Score=163.56 Aligned_cols=245 Identities=11% Similarity=0.078 Sum_probs=152.4
Q ss_pred CCCCCCCCCCCC-CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcc-c
Q 042286 31 HSSHRLPPGPKP-WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNS-G 108 (303)
Q Consensus 31 ~~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~ 108 (303)
.+..+.||||++ +|++|+++.+..+++.++.+|+++||+||++++++.++++++||+++++++.++...+..++... .
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 93 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL 93 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence 345567899998 89999998876678999999999999999999999999999999999999976543233322111 1
Q ss_pred ccccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHh---cCCCcccHHHHHHHHHHHHH
Q 042286 109 AKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALAS---AGTEPVNLAQRLNLCVVNAL 185 (303)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~---~~~~~~d~~~~~~~~~~~vi 185 (303)
..... +.+++.. +|+.| |+++. +.|+...++.+.+.+.+.+...++.... .....+++...+..++++++
T Consensus 94 ~~~~~--g~~~~~~-~~~~~---rr~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~ 166 (498)
T 3b6h_A 94 MERIF--DVQLPHY-SPSDE---KARMK-LTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAG 166 (498)
T ss_dssp HHHTS--CCCCTTC-CHHHH---HHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHH
T ss_pred HHHHc--CCCcccc-CHHHH---HHHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHH
Confidence 11111 2344444 36666 55666 7898888888888777777777766541 12235789999999999999
Q ss_pred HHHHhcccccCCCCCCCChhH-HHHHHHHHHHHHHhcCCccccccccccc-cCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 042286 186 GRVMLGFRVFGDGTGGSDPRA-DEFKSMVVELMVLAGVFNVGDFVPALER-LDLQGVARKMKKLHKRFDVFLSDILEERK 263 (303)
Q Consensus 186 ~~~~fG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 263 (303)
+.++||.+++.. +... ......+..+...... +...+|++.+ +..+...++..++.+.+.+.+ ++++.
T Consensus 167 ~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 236 (498)
T 3b6h_A 167 YLTLYGIEALPR-----THESQAQDRVHSADVFHTFRQ--LDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL---SPARL 236 (498)
T ss_dssp HHHHHCBSCSSC-----CHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT---CHHHH
T ss_pred HHhhcCcccccc-----cccchhhHHHhhHHHHHHHHH--HHhhHHHHHHHhcCchhhHHHHHHHHHHHHHH---HHHHH
Confidence 999999987542 1111 1122222332222111 2234453322 211122233444444443322 23333
Q ss_pred HcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHh
Q 042286 264 MNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIK 299 (303)
Q Consensus 264 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~ 299 (303)
++. ....|+++.+++..+++ + .++++++.
T Consensus 237 ~~~----~~~~d~l~~ll~~~~~~-~--~~~~~~~~ 265 (498)
T 3b6h_A 237 ARR----AHRSKWLESYLLHLEEM-G--VSEEMQAR 265 (498)
T ss_dssp TTC----BSCCHHHHHHHHHHHHT-T--CCHHHHHH
T ss_pred hcc----ccHHHHHHHHHHHHHhC-C--CCHHHHHH
Confidence 321 24679999999765542 2 46777765
No 59
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.85 E-value=1.1e-19 Score=149.05 Aligned_cols=201 Identities=15% Similarity=0.222 Sum_probs=149.8
Q ss_pred CCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCCcc-cccccccCCcc--eeeccCC--
Q 042286 52 LGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPPNS-GAKHIAYNYQD--IVFRPYG-- 125 (303)
Q Consensus 52 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~g-- 125 (303)
+..+++..+.++ ++||||+++++ ++.+.|+|++|+++++|+.++ .|.+++... ...... .+.+ +++. +|
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~-~g~~ 98 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLIS-DADA 98 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCB-CSCH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceee-CCCC
Confidence 356889999999 88999999996 789999999999999999764 366654322 111111 1234 5554 59
Q ss_pred ----hHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCC
Q 042286 126 ----PRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTG 200 (303)
Q Consensus 126 ----~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 200 (303)
+.|+++|++++ ++|++..++.+.+.+.+.+..+++.+.. .|+++|+.+.+ ..+++++++. +||.+.+
T Consensus 99 ~~~~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~----- 170 (404)
T 2xbk_A 99 ESGRRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIA-QGPPGDLHGELTVPFALTVLCE-VIGVPPQ----- 170 (404)
T ss_dssp HHHHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSSEEHHHHTHHHHHHHHHHH-HHTCCGG-----
T ss_pred CCCCchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHHHHHHHHH-HhCCCHH-----
Confidence 99999999998 9999999999999999999999999974 46689998766 5699999998 6998764
Q ss_pred CCChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Q 042286 201 GSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTL 280 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~l 280 (303)
..+.+......+. ... .++ +..++.+.+.+++.++|++++++. ..|+++.|
T Consensus 171 ----~~~~~~~~~~~~~---~~~-------------~~p---~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~l 221 (404)
T 2xbk_A 171 ----RRAELTTLLAGIA---KLD-------------DRE---GAVRAQDDLFGYVAGLVEHKRAEP------GPDIISRL 221 (404)
T ss_dssp ----GHHHHHHHHHHHT---BSS-------------CHH---HHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHH
T ss_pred ----HHHHHHHHHHHHH---hcc-------------CcH---HHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHh
Confidence 2334444433322 100 011 456677889999999999988752 35899988
Q ss_pred HhcccccCCCCCCCHHHHhhhc
Q 042286 281 ISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 281 l~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+ + + .++++|+.+++
T Consensus 222 -~---~--~--~ls~~ei~~~~ 235 (404)
T 2xbk_A 222 -N---D--G--ELTEDRVAHLA 235 (404)
T ss_dssp -H---S--S--SCCHHHHHHHH
T ss_pred -h---c--C--CCCHHHHHHHH
Confidence 2 1 3 58999998765
No 60
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.85 E-value=2.8e-20 Score=153.15 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=151.9
Q ss_pred CCCcchhHHHHHHhcCCcE-----EEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcc-ccc--cc-c-cCCcceeec
Q 042286 53 GPMPHQSIAGLARTHGPLM-----YLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNS-GAK--HI-A-YNYQDIVFR 122 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~-----~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~ 122 (303)
..+++.++.+++ +||||+ +++. .+.++|++|+++++|+.++ ..|++++... ... .+ . ..+.++++.
T Consensus 24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 99 (414)
T 2uuq_A 24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ 99 (414)
T ss_dssp TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence 468899999985 689999 7765 5799999999999999875 5687765432 111 22 1 223566666
Q ss_pred cCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHH-HHHHHHHHHHHHHHHhcccccCCCCCC
Q 042286 123 PYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLA-QRLNLCVVNALGRVMLGFRVFGDGTGG 201 (303)
Q Consensus 123 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~ 201 (303)
+|+.|+++|++++ ++|++..++.+.+.+.+.+.++++.+... +++|+. +.+..+++++++. +||.+++.
T Consensus 100 -~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~vdl~~~~~~~~~~~vi~~-~~G~~~~~----- 169 (414)
T 2uuq_A 100 -DPPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRAN--GGGDIVTELFKPLPSMVVAH-YLGVPEED----- 169 (414)
T ss_dssp -CTTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHT--TEEEHHHHTTTHHHHHHHHH-HTTCCGGG-----
T ss_pred -CchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHHHHhHHHHHHH-HhCCCHHH-----
Confidence 5999999999998 99999999999999999999999999743 369997 5567999999999 69987752
Q ss_pred CChhHHHHHHHHHHHHHHhcCCcccccc-ccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Q 042286 202 SDPRADEFKSMVVELMVLAGVFNVGDFV-PALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTL 280 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~l 280 (303)
.+.+.+....+.... .+ |.. ++..++.+.+.+++.++|++++++ ...|+++.|
T Consensus 170 ----~~~~~~~~~~~~~~~-------~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~------~~~dll~~l 223 (414)
T 2uuq_A 170 ----WTQFDGWTQAIVAAN-------AVDGAT---------TGALDAVGSMMAYFTGLIERRRTE------PADDAISHL 223 (414)
T ss_dssp ----HHHHHHHHHHHHHHH-------HC--------------CCHHHHHHHHHHHHHHHHHHTTS------CCSSHHHHH
T ss_pred ----HHHHHHHHHHHHhhc-------ccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHH
Confidence 334444444433210 11 210 123456778889999999988764 246999999
Q ss_pred HhcccccCCCCCCCHHHHhhhc
Q 042286 281 ISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 281 l~~~~~~~~~~~l~~~ei~~~~ 302 (303)
+++..+++++ .++++|+.+++
T Consensus 224 l~~~~~~~~~-~ls~~ei~~~~ 244 (414)
T 2uuq_A 224 VAAGVGADGD-TAGTLSILAFT 244 (414)
T ss_dssp HHTTTTCTTC-HHHHHHHHHHH
T ss_pred HhcccccCCC-CCCHHHHHHHH
Confidence 9876421233 68999998765
No 61
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.84 E-value=5.2e-20 Score=150.96 Aligned_cols=207 Identities=17% Similarity=0.128 Sum_probs=150.1
Q ss_pred CCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccc------cccccC-CcceeeccCCh
Q 042286 54 PMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGA------KHIAYN-YQDIVFRPYGP 126 (303)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~g~ 126 (303)
.+++..+.++ ++||||++ + |.+.++|++|+++++++.+ ..|.+++..... ...... +.++++. +|+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQ-DEP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGC-CTT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccC-Cch
Confidence 4778888877 58999998 6 5789999999999999975 356654321100 011110 3456555 499
Q ss_pred HHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHH-HHHHHHHHHHHHHhcccccCCCCCCCChh
Q 042286 127 RWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQR-LNLCVVNALGRVMLGFRVFGDGTGGSDPR 205 (303)
Q Consensus 127 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (303)
.|+++|++++ ++|++..++.+.+.+.+.+..+++.+.. ++++|+... ...+++++++.+ ||.+.+ .
T Consensus 86 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~~vi~~~-~G~~~~---------~ 152 (397)
T 3buj_A 86 DHGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA--RGAMDVVDELAYPLALRAVLGL-LGLPAA---------D 152 (397)
T ss_dssp HHHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT--TTEEEHHHHTHHHHHHHHHHHH-HTCCGG---------G
T ss_pred hHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHhHHHHHHHH-hCCCHH---------H
Confidence 9999999998 9999999999999999999999999973 357998755 578999999999 998775 2
Q ss_pred HHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhccc
Q 042286 206 ADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMD 285 (303)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (303)
.+.+......+...... + + .+...++..++.+.+.+++.++|++++++. ..|+++.|+++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~-------~----~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~ 214 (397)
T 3buj_A 153 WGAVGRWSRDVGRTLDR-------G----A-SAEDMRRGHAAIAEFADYVERALARRRREG------GEDLLALMLDAHD 214 (397)
T ss_dssp HHHHHHHHHHHHGGGCS-------S----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCC-------C----C-ChHHHHHHHHHHHHHHHHHHHHHHHHHcCC------CCCHHHHHHHhhh
Confidence 33444444444322110 0 1 112345667788899999999999998762 4599999998753
Q ss_pred ccCCCCCCCHHHHhhhc
Q 042286 286 DANGEEKLTETEIKALL 302 (303)
Q Consensus 286 ~~~~~~~l~~~ei~~~~ 302 (303)
+ |+ ++++||.+++
T Consensus 215 ~--~~--ls~~ei~~~~ 227 (397)
T 3buj_A 215 R--GL--MSRNEIVSTV 227 (397)
T ss_dssp T--TS--SCHHHHHHHH
T ss_pred c--CC--CCHHHHHHHH
Confidence 2 32 9999998765
No 62
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.84 E-value=5.5e-20 Score=150.84 Aligned_cols=207 Identities=13% Similarity=0.083 Sum_probs=152.0
Q ss_pred CCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHHHH
Q 042286 51 HLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRM 130 (303)
Q Consensus 51 ~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 130 (303)
.+..+++..+.+|+++ |||+++..++ +.++|++|+++++++.+. +.|++++...........+ ..++..+|+.|++
T Consensus 21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~-~~~~~~~g~~h~~ 96 (396)
T 3oft_A 21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQ-FIPLQQDGAEHKA 96 (396)
T ss_dssp TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHC-CTTTTCCHHHHHH
T ss_pred hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccc-cCccccCCcHHHH
Confidence 3457899999999998 9999998875 588899999999999654 5677765322111111111 2344455999999
Q ss_pred HHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCChhHHHH
Q 042286 131 LRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDPRADEF 209 (303)
Q Consensus 131 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 209 (303)
+|++++ ++|++..++.+.+.+.+.+..+++.+... +.+|+...+ ..++.++++. +||.+.+ ....+
T Consensus 97 ~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~d~~~~~~~~~~~~v~~~-~~G~~~~---------~~~~~ 163 (396)
T 3oft_A 97 FRTPVM-KGLASRFVVALEPKVQAVARKLMESLRPR--GSCDFVSDFAEILPLNIFLT-LIDVPLE---------DRPRL 163 (396)
T ss_dssp HHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGGG--SEEEHHHHTTTTHHHHHHHH-HTTCCGG---------GHHHH
T ss_pred HHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhhc--CCccHHHHHHHHHHHHHHHH-HcCCCHH---------HHHHH
Confidence 999998 99999999999999999999999999732 468886655 5678888877 5887654 34455
Q ss_pred HHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCC
Q 042286 210 KSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDANG 289 (303)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~ 289 (303)
......+.. .. . .++..++.+.+.+++.++|++++++. ..|+++.|+++.++ +
T Consensus 164 ~~~~~~~~~---~~---------~-------~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~~--~ 216 (396)
T 3oft_A 164 RQLGVQLTR---PD---------G-------SMTVEQLKQAADDYLWPFIEKRMAQP------GDDLFSRILSEPVG--G 216 (396)
T ss_dssp HHHHHHHHS---CC---------S-------SCCHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHTSCBT--T
T ss_pred HHHHHHHhC---CC---------C-------HHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhcc--C
Confidence 555444331 00 0 12355777889999999999998862 46999999987653 3
Q ss_pred CCCCCHHHHhhhc
Q 042286 290 EEKLTETEIKALL 302 (303)
Q Consensus 290 ~~~l~~~ei~~~~ 302 (303)
+ .++++|+.+++
T Consensus 217 ~-~l~~~el~~~~ 228 (396)
T 3oft_A 217 R-PWTVDEARRMC 228 (396)
T ss_dssp B-CCCHHHHHHHH
T ss_pred C-CCCHHHHHHHH
Confidence 3 69999998765
No 63
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.83 E-value=5.1e-19 Score=146.13 Aligned_cols=212 Identities=13% Similarity=0.060 Sum_probs=149.8
Q ss_pred CCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCCCCCC---ccccc-----c-cccCCcceeec
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFSNRPP---NSGAK-----H-IAYNYQDIVFR 122 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~---~~~~~-----~-~~~~~~~~~~~ 122 (303)
..+|+..+.+++++ |||+++.. ++.+.++|++++++++++.+. ..|++++. ..... . ....+.+++ .
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 113 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFI-A 113 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGG-G
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCccc-c
Confidence 45789999999986 99999977 467799999999999999764 45666441 11111 0 011122344 4
Q ss_pred cCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCC
Q 042286 123 PYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGG 201 (303)
Q Consensus 123 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 201 (303)
.+|+.|+++|++++ ++|++..++.+.+.+.+.+.++++.+. .++++|+...+ ..++.++++. +||.+.+.
T Consensus 114 ~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~--~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~----- 184 (426)
T 3rwl_A 114 MDRPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLP--VGEEFDWVDRVSIEITTQMLAT-LFDFPFEE----- 184 (426)
T ss_dssp CCTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSC--SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG-----
T ss_pred cCchHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhh--cCCCcchHHHHHHHHHHHHHHH-HcCCCHHH-----
Confidence 45999999999998 999999999999999999999999984 45689987776 6899998887 79986543
Q ss_pred CChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Q 042286 202 SDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLI 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll 281 (303)
...+......+. ... .+ . .....++..++.+.+.+++.++|++++.. +...|+++.|+
T Consensus 185 ----~~~~~~~~~~~~----~~~----~~--~---~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~dll~~ll 242 (426)
T 3rwl_A 185 ----RRKLTRWSDVTT----AAP----GG--G---VVESWDQRKTELLECAAYFQVLWNERVNK-----DPGNDLISMLA 242 (426)
T ss_dssp ----THHHHHHHHHHT----CCT----TS--S---SCSSHHHHHHHHHHHHHHHHHHHHHHHTS-----CCCSSHHHHHH
T ss_pred ----HHHHHHHHHHHH----hcc----Cc--c---ccccHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCCHHHHHH
Confidence 233333322221 110 01 0 01223455677789999999999988432 24579999999
Q ss_pred hcccccCCCCCCCHHHHhhhc
Q 042286 282 SLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 282 ~~~~~~~~~~~l~~~ei~~~~ 302 (303)
++.++ + .++++|+.+++
T Consensus 243 ~~~~~--~--~ls~~el~~~~ 259 (426)
T 3rwl_A 243 HSPAT--R--NMTPEEYLGNV 259 (426)
T ss_dssp HCGGG--G--GCCHHHHHHHH
T ss_pred hcccC--C--CCCHHHHHHHH
Confidence 87654 2 48999998765
No 64
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.83 E-value=2.1e-21 Score=163.22 Aligned_cols=155 Identities=14% Similarity=0.096 Sum_probs=114.5
Q ss_pred CCCCCCCCCCCC-CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCc-cc
Q 042286 31 HSSHRLPPGPKP-WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPN-SG 108 (303)
Q Consensus 31 ~~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~-~~ 108 (303)
++..+.||||++ +|++||++.+..+++..+.+++++|||||++++++.+++++++|+++++++.++.. +..++.. ..
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~ 92 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVL 92 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHH
Confidence 344568899998 89999998876789999999999999999999999999999999999999976432 3322111 11
Q ss_pred ccccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcC----CCcccHHHHHHHHHHHH
Q 042286 109 AKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAG----TEPVNLAQRLNLCVVNA 184 (303)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~----~~~~d~~~~~~~~~~~v 184 (303)
..... +.+++.. +|+.| |++++ ++|+...++.+.+.+.+.+..+++.+.... ...+++...+..+++++
T Consensus 93 ~~~~~--g~~~~~~-~~~~~---R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (475)
T 3b98_A 93 MKRIF--NMILPSH-NPESE---KKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKT 165 (475)
T ss_dssp HHHTT--CCCCTTC-CHHHH---HHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHH
T ss_pred HHHHh--CCCCCCC-ChHHH---HHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHH
Confidence 11111 2344444 36655 67777 899999999999999999998888765221 12467777777777777
Q ss_pred HHHHHhccc
Q 042286 185 LGRVMLGFR 193 (303)
Q Consensus 185 i~~~~fG~~ 193 (303)
++...||.+
T Consensus 166 ~~~~~~g~~ 174 (475)
T 3b98_A 166 GYLTVFGAE 174 (475)
T ss_dssp HHHHHHCCT
T ss_pred hhhheeCCc
Confidence 777777743
No 65
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.82 E-value=1.1e-19 Score=149.50 Aligned_cols=206 Identities=15% Similarity=0.095 Sum_probs=149.4
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcCC--eeEEEecCHHHHHHHHHHccccCCCCCCcccccccc---cC-CcceeeccCCh
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLGF--VDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIA---YN-YQDIVFRPYGP 126 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~~--~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~g~ 126 (303)
..+++..+.++++ ||||+++...| .+.++|++++++++++.+ .+.|++++......... .. +.+++ ..+|+
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~~~~~~~~~~~~~~l~-~~dg~ 112 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMMIGFDRDHPDNSGGRMMV-VSEHE 112 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSSTTCCSSSCCTTTTTSGG-GCCHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCccccccccccccccccCCCcc-ccCcH
Confidence 3588999999987 89999997445 789999999999999954 44677765433221111 11 23344 44599
Q ss_pred HHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCChh
Q 042286 127 RWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDPR 205 (303)
Q Consensus 127 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (303)
.|+++|++++ ++|++..++.+.+.+.+.+..+++.+.. ++++|+.+.+ ..+++++++.+ ||.+.+ +
T Consensus 113 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~l-~G~~~~---------~ 179 (415)
T 3mgx_A 113 QHRKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLD--GEVCDAATAIGPRIPAAVVCEI-LGVPAE---------D 179 (415)
T ss_dssp HHHHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSS--SSCEESTTTTTTHHHHHHHHHH-HTCCGG---------G
T ss_pred HHHHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHHH-cCCCHH---------H
Confidence 9999999998 9999999999999999999999998863 2479998877 67999999985 886543 3
Q ss_pred HHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhccc
Q 042286 206 ADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMD 285 (303)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (303)
...+.+....+... . .....| . ...++.+.+.+++.++|++++++. ..|+++.|+++.
T Consensus 180 ~~~~~~~~~~~~~~---~-~~~~~~------~-----~~~~~~~~l~~~~~~~i~~rr~~~------~~dll~~ll~~~- 237 (415)
T 3mgx_A 180 EDMLIDLTNHAFGG---E-DELFDG------M-----TPRQAHTEILVYFDELITARRKEP------GDDLVSTLVTDD- 237 (415)
T ss_dssp HHHHHHHHHHHTSC---C-C----C------C-----CHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCT-
T ss_pred HHHHHHHHHHHHcc---c-Ccccch------H-----HHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhCC-
Confidence 44555554444311 1 001111 1 123667889999999999998763 459999999853
Q ss_pred ccCCCCCCCHHHHhhhc
Q 042286 286 DANGEEKLTETEIKALL 302 (303)
Q Consensus 286 ~~~~~~~l~~~ei~~~~ 302 (303)
.++++|+.+++
T Consensus 238 ------~ls~~el~~~~ 248 (415)
T 3mgx_A 238 ------DLTIDDVLLNC 248 (415)
T ss_dssp ------TSCHHHHHHHH
T ss_pred ------CCCHHHHHHHH
Confidence 58999988765
No 66
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.82 E-value=3.4e-20 Score=156.60 Aligned_cols=164 Identities=12% Similarity=0.082 Sum_probs=122.9
Q ss_pred CCCCCCCCCCCCCCcccccCCC-----CCCcchhHHHHHHhcCC-cEEEEcCCeeE-------EEecCHHHHHHHHHHcc
Q 042286 31 HSSHRLPPGPKPWPIVGNLPHL-----GPMPHQSIAGLARTHGP-LMYLRLGFVDV-------VVAASASVAAQFLKIHD 97 (303)
Q Consensus 31 ~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------v~v~~p~~i~~i~~~~~ 97 (303)
..+.+.||||+++|++|++..+ ..+++.++.+++++||+ ||++++++.++ +++.+++..+.++....
T Consensus 24 ~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~ 103 (495)
T 3dsk_A 24 DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK 103 (495)
T ss_dssp CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence 4566789999999999998765 47899999999999999 99999988777 66677666655553211
Q ss_pred ----ccCCCCCCcccccccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHh--cCCCcc
Q 042286 98 ----SNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALAS--AGTEPV 171 (303)
Q Consensus 98 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~~ 171 (303)
..+..... .....++..+...++..+|+.|+++|+++. +.|+... +.+.+.+.+.+..+++.|.. ..++++
T Consensus 104 v~k~~~~~~~~~-~~~~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~v 180 (495)
T 3dsk_A 104 VEKKDLLTGTYM-PSTELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGKA 180 (495)
T ss_dssp EECSSCTTSSSC-CCGGGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSSE
T ss_pred ccccccccccCC-CCccccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 11111111 111222212223344446999999999998 9998755 88999999999999999973 235689
Q ss_pred cHHHHHHHHHHHHHHHHHhcccccCC
Q 042286 172 NLAQRLNLCVVNALGRVMLGFRVFGD 197 (303)
Q Consensus 172 d~~~~~~~~~~~vi~~~~fG~~~~~~ 197 (303)
|+.+++.++++++++.++||.+++..
T Consensus 181 dl~~~~~~~~~~~i~~~~~G~~~~~~ 206 (495)
T 3dsk_A 181 DFGGSSDGTAFNFLARAFYGTNPADT 206 (495)
T ss_dssp ESHHHHHHHHHHHHHHHHHSCCGGGS
T ss_pred cHHHHHHHHHHHHHHHHHcCCCcchh
Confidence 99999999999999999999988764
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.82 E-value=2.4e-19 Score=147.01 Aligned_cols=202 Identities=14% Similarity=0.174 Sum_probs=143.3
Q ss_pred chhHHHHHHhcCCcEEEEcC-Ce---eEEEecCHHHHHHHHHHccccCCCCCC------ccccccc--ccCCcceeeccC
Q 042286 57 HQSIAGLARTHGPLMYLRLG-FV---DVVVAASASVAAQFLKIHDSNFSNRPP------NSGAKHI--AYNYQDIVFRPY 124 (303)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~-~~---~~v~v~~p~~i~~i~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~ 124 (303)
+..+.+|+++ |||++++++ |. +.|+|++|+++++++.++ ..|++++. ....... ...+.++++. +
T Consensus 16 ~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~ 92 (398)
T 1lfk_A 16 LDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDY-D 92 (398)
T ss_dssp TEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGC-C
T ss_pred CChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCcccc-C
Confidence 4445668876 999999875 55 899999999999999433 24665543 1101111 1123456555 5
Q ss_pred ChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHH-HHHHHHHHHHhcccccCCCCCCCC
Q 042286 125 GPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNL-CVVNALGRVMLGFRVFGDGTGGSD 203 (303)
Q Consensus 125 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~-~~~~vi~~~~fG~~~~~~~~~~~~ 203 (303)
|+.|+++|++++ +.|++..++.+.+.+.+.+.++++.+.. .|+++|+.+.+.. ++.++++. +||.+.+
T Consensus 93 g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~-------- 161 (398)
T 1lfk_A 93 PPEHTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMER-AGSPADLIAFVADKVPGAVLCE-LVGVPRD-------- 161 (398)
T ss_dssp TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG--------
T ss_pred CHHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHH--------
Confidence 999999999998 9999999999999999999999999974 3568999999987 99999998 5998765
Q ss_pred hhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhc
Q 042286 204 PRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISL 283 (303)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~ 283 (303)
....+.+....+. . . +...++..++.+.+.+++.++|++++++. ..|+++.|+++
T Consensus 162 -~~~~~~~~~~~~~---~------~---------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~ 216 (398)
T 1lfk_A 162 -DRDMFMKLCHGHL---D------A---------SLSQKRRAALGDKFSRYLLAMIARERKEP------GEGMIGAVVAE 216 (398)
T ss_dssp -GHHHHHHHHHHTT---C------T---------TSCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHH
T ss_pred -HHHHHHHHHHHHH---h------c---------ccchHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHh
Confidence 2233433333221 0 0 01124667788899999999999998752 45999999986
Q ss_pred ccccCCCCCCCHHHHhhhc
Q 042286 284 MDDANGEEKLTETEIKALL 302 (303)
Q Consensus 284 ~~~~~~~~~l~~~ei~~~~ 302 (303)
. + + .++++|+.+++
T Consensus 217 ~-~--~--~l~~~el~~~~ 230 (398)
T 1lfk_A 217 Y-G--D--DATDEELRGFC 230 (398)
T ss_dssp H-G--G--GSCHHHHHHHH
T ss_pred c-C--C--CCCHHHHHHHH
Confidence 5 2 2 58999998765
No 68
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.81 E-value=1.1e-19 Score=152.57 Aligned_cols=162 Identities=12% Similarity=0.089 Sum_probs=118.1
Q ss_pred CCCCCCCCCCCCCcccccCCC-----CC-CcchhHHHHHHhcCC-cEEEEcC-------CeeEEEecCHHHHHHHHHH--
Q 042286 32 SSHRLPPGPKPWPIVGNLPHL-----GP-MPHQSIAGLARTHGP-LMYLRLG-------FVDVVVAASASVAAQFLKI-- 95 (303)
Q Consensus 32 ~~~~~~pgp~~~p~~g~~~~~-----~~-~~~~~~~~~~~~yG~-i~~~~~~-------~~~~v~v~~p~~i~~i~~~-- 95 (303)
.+.+.+|||+++|++|++..+ .. +++.++.+++++||+ ||+++++ +...|++.+....+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 455678999999999998764 45 789999999999999 9999986 3455555555544444421
Q ss_pred --ccccCCCCCCcccccccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHh--cCCCcc
Q 042286 96 --HDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALAS--AGTEPV 171 (303)
Q Consensus 96 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~~ 171 (303)
+...+..... .......+.....+...+|+.|+++|++++ +.|++ .++.+.+.+.+.++++++.|.. ..++++
T Consensus 86 ~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~-~~f~~-~~~~~~~~i~~~~~~ll~~~~~~~~~~~~v 162 (473)
T 3dan_A 86 VEKKDLFTGTYM-PSTKLTGGYRVLSYLDPSEPRHAQLKNLLF-FMLKN-SSNRVIPQFETTYTELFEGLEAELAKNGKA 162 (473)
T ss_dssp EECSSCTTSSSC-CCGGGGTTSCCGGGCCTTSHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred eecccccccccc-CCccccCCCcceeeeCCCcHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 1111111111 111122211123344456999999999998 99998 5899999999999999999973 234689
Q ss_pred cHHHHHHHHHHHHHHHHHhcccccC
Q 042286 172 NLAQRLNLCVVNALGRVMLGFRVFG 196 (303)
Q Consensus 172 d~~~~~~~~~~~vi~~~~fG~~~~~ 196 (303)
|+.+++.++++++++.++||.+++.
T Consensus 163 dl~~~~~~~~~~~i~~~~~G~~~~~ 187 (473)
T 3dan_A 163 AFNDVGEQAAFRFLGRAYFNSNPEE 187 (473)
T ss_dssp ECHHHHHHHHHHHHHHHHHSCCGGG
T ss_pred cHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999998876
No 69
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.80 E-value=7.7e-19 Score=143.83 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=145.0
Q ss_pred CCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHHccccCC-C-CCCc--cccc--cccc-CCcceeecc
Q 042286 52 LGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKIHDSNFS-N-RPPN--SGAK--HIAY-NYQDIVFRP 123 (303)
Q Consensus 52 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~ 123 (303)
+..+++..+.+| ++||||+++++ ++.+.|++++|+++++++.++ .|. + ++.. .... .+.. .+.+++++
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 89 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI- 89 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH-
Confidence 456899999999 89999999997 788999999999999999764 355 4 3321 1111 1111 12455544
Q ss_pred CChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCC
Q 042286 124 YGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGS 202 (303)
Q Consensus 124 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~ 202 (303)
.|+++|++++ +.|++. ++.+.+.+.+.+.++++.+... ++++|+.+.+ ..+++++++. +||.+.+
T Consensus 90 ---~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------- 155 (396)
T 1n40_A 90 ---ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLITE-GAPADLRNDFADPLATALHCK-VLGIPQE------- 155 (396)
T ss_dssp ---HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHHH-CSCEETTTTTHHHHHHHHHHH-HHTCCGG-------
T ss_pred ---HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHhHHHHHHH-HhCCChh-------
Confidence 9999999998 999999 9999999999999999999742 5689998665 4899999999 7998764
Q ss_pred ChhHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHh
Q 042286 203 DPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLIS 282 (303)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~ 282 (303)
+...+.+....+.. .. ...| .++..++.+.+ +++.++|+ + . ....|+++.|++
T Consensus 156 --~~~~~~~~~~~~~~---~~---~~~p----------~~~~~~~~~~~-~~~~~~i~----~--~--~~~~dll~~ll~ 208 (396)
T 1n40_A 156 --DGPKLFRSLSIAFM---SS---ADPI----------PAAKINWDRDI-EYMAGILE----N--P--NITTGLMGELSR 208 (396)
T ss_dssp --GHHHHHHTHHHHTB---CC---SSCC----------HHHHHHHHHHH-HHHHHHHH----C--T--TCCSHHHHHHHH
T ss_pred --hHHHHHHHHHHHhc---cc---cCCC----------HHHHHHHHHHH-HHHHHHHh----C--C--CCCCCHHHHHHH
Confidence 23344444433321 10 0011 13555666777 88888887 1 1 235799999998
Q ss_pred cccccCCCCCCCHHHHhhhc
Q 042286 283 LMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 283 ~~~~~~~~~~l~~~ei~~~~ 302 (303)
+..+++++ .++++|+.+++
T Consensus 209 ~~~~~~~~-~l~~~~i~~~~ 227 (396)
T 1n40_A 209 LRKDPAYS-HVSDELFATIG 227 (396)
T ss_dssp HHTSGGGT-TSCHHHHHHHH
T ss_pred hhcccccC-CCCHHHHHHHH
Confidence 65211133 69999998765
No 70
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.79 E-value=2.2e-18 Score=141.00 Aligned_cols=208 Identities=18% Similarity=0.223 Sum_probs=147.2
Q ss_pred CCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHHHHHHH
Q 042286 54 PMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRK 133 (303)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 133 (303)
.+|+..+.++++ +|||+++..| .++|++++.+++++.+. .|+.++...........+.++ +..+|+.|+++|+
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTA-LGSDPPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSG-GGCCTTHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccchhccccc-ccCCchHHHHHHH
Confidence 478888988877 4899987543 68999999999999643 454432111111111112344 4455999999999
Q ss_pred HHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHhcccccCCCCCCCChhHHHHHHHH
Q 042286 134 ISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMV 213 (303)
Q Consensus 134 ~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 213 (303)
+++ ++|++..++.+.+.+.+.+..+++.+. .++++|+.+.+..+++++++..+||.+.+ +...+.+.+
T Consensus 93 ~~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~--~~~~~d~~~~~~~~~~~vi~~~~~G~~~~---------~~~~~~~~~ 160 (394)
T 2wiy_A 93 QTN-KWFTPKLVDGWVRTTRELVGDLLDGVE--AGQVIEARRDLAVVPTHVTMARVLQLPED---------DADAVMEAM 160 (394)
T ss_dssp HHH-TTCSHHHHHHHTHHHHHHHHHHHHTCC--TTCCEEHHHHHTHHHHHHHHHHHHTCCCC---------CHHHHHHHH
T ss_pred HHH-hccCHHHHHHHHHHHHHHHHHHHHHHh--ccCCeeHHHHHHhhhHHHHHHHHcCCCHh---------HHHHHHHHH
Confidence 998 999999999999999999999999885 45689999999999999999999998653 233444433
Q ss_pred HHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCCCCCC
Q 042286 214 VELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDANGEEKL 293 (303)
Q Consensus 214 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l 293 (303)
.... .. ....|. ....++..++...+.+++.++|++++++. .+|+++.|+++.++ + .+
T Consensus 161 ~~~~--~~----~~~~p~------~~~~~~~~~~~~~l~~~~~~~i~~rr~~~------~~dll~~Ll~~~~~--~--~l 218 (394)
T 2wiy_A 161 FEAM--LM----QSAEPA------DGDVDRAAVAFGYLSARVAEMLEDKRVNP------GDGLADSLLDAARA--G--EI 218 (394)
T ss_dssp HHHH--GG----GSSSCC------TTHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHHHT--T--SS
T ss_pred HHHH--Hh----ccCCcc------chHHHHHHHHHHHHHHHHHHHHHHhhcCC------CCcHHHHHHHhhhc--C--CC
Confidence 2221 10 001121 12234556677888999999999988753 35899999987543 3 59
Q ss_pred CHHHHhhhc
Q 042286 294 TETEIKALL 302 (303)
Q Consensus 294 ~~~ei~~~~ 302 (303)
+++|+.+++
T Consensus 219 s~~el~~~~ 227 (394)
T 2wiy_A 219 TESEAIATI 227 (394)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999998765
No 71
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.79 E-value=1.9e-19 Score=148.37 Aligned_cols=209 Identities=15% Similarity=0.183 Sum_probs=145.5
Q ss_pred CCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcc-c-c----cccccCCcceeeccCCh
Q 042286 53 GPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNS-G-A----KHIAYNYQDIVFRPYGP 126 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~-~----~~~~~~~~~~~~~~~g~ 126 (303)
..+|+.. . +.++|||++++..+... ++|++++++++|+.++. +....... . . ........+.++..+|+
T Consensus 32 ~~~P~~~-~-~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 106 (416)
T 3p3o_A 32 PNFSWDS-P-EVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGA 106 (416)
T ss_dssp TTCCTTS-H-HHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHH
T ss_pred ccCCchH-H-HHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCch
Confidence 5678887 4 45569999999886555 99999999999997653 33221100 0 0 00000001234445599
Q ss_pred HHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCChh
Q 042286 127 RWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDPR 205 (303)
Q Consensus 127 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (303)
+|+++|++++ ++|++..++.+.+.+.+.++.+++.+ ..| .+|+...+ ..+++++++.+ ||.+.+ +
T Consensus 107 ~h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l--~~g-~~d~~~~~~~~~~~~vi~~l-~G~~~~---------~ 172 (416)
T 3p3o_A 107 DHRRLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL--PQG-DFDFVQHFPHPLPALVMCQL-LGFPLE---------D 172 (416)
T ss_dssp HHHHHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC--CSS-SEEHHHHTTTHHHHHHHHHH-HTCCGG---------G
T ss_pred HHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh--ccC-CccHHHHHHHHHHHHHHHHH-hCCCHH---------H
Confidence 9999999998 99999999999999999999999999 334 58965554 56999999995 897654 2
Q ss_pred HHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhccc
Q 042286 206 ADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMD 285 (303)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (303)
...+......+... +... ......++..++.+.+.+++.++|++++++. ..|+++.|+++..
T Consensus 173 ~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~------~~dll~~ll~~~~ 234 (416)
T 3p3o_A 173 YDTVGRLSIETNLG---------LALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVEP------GDDLTSDIVRAFH 234 (416)
T ss_dssp HHHHHHHHHTTCGG---------GTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh---------cccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC------CccHHHHHHHhhc
Confidence 33343333322111 1100 0123356778888999999999999998763 4599999998765
Q ss_pred ccCCCCCCCHHHHhhhc
Q 042286 286 DANGEEKLTETEIKALL 302 (303)
Q Consensus 286 ~~~~~~~l~~~ei~~~~ 302 (303)
+ + .++++|+.+++
T Consensus 235 ~--~--~ls~~el~~~~ 247 (416)
T 3p3o_A 235 D--G--VLDDYELRTLV 247 (416)
T ss_dssp T--T--SSCHHHHHHHH
T ss_pred c--C--CCCHHHHHHHH
Confidence 4 2 69999998765
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.77 E-value=2.7e-18 Score=139.11 Aligned_cols=193 Identities=16% Similarity=0.128 Sum_probs=138.5
Q ss_pred cchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCC-cc-cc-----c-ccccC--CcceeeccCC
Q 042286 56 PHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPP-NS-GA-----K-HIAYN--YQDIVFRPYG 125 (303)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~-~~-~~-----~-~~~~~--~~~~~~~~~g 125 (303)
|+..+.+++ +||||+++. | .+++++|+++++++.++ ..|++++. .. .. . ...+. +.++++.+ |
T Consensus 1 p~~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 73 (367)
T 3b4x_A 1 MYDWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSD-P 73 (367)
T ss_dssp CHHHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCC-T
T ss_pred CCHHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCC-c
Confidence 456677885 699999987 3 79999999999999865 46777642 11 11 1 12110 24666664 9
Q ss_pred hHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCCh
Q 042286 126 PRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDP 204 (303)
Q Consensus 126 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (303)
+.|+++|++++ ++|++..++. +.+.+.++.+++.+. | .+|+.+.+ ..+++++++. +||.+ +
T Consensus 74 ~~h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~---g-~~d~~~~~~~~~~~~vi~~-~~G~~-~--------- 135 (367)
T 3b4x_A 74 PLHDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD---E-EFDVIESFAIPLPILVISK-MLGIN-P--------- 135 (367)
T ss_dssp THHHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC---S-EEEHHHHTTTHHHHHHHHH-HHTCC-C---------
T ss_pred hhHHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc---C-CcchHHHHHHhhHHHHHHH-HcCCC-C---------
Confidence 99999999999 9999999988 999999999999885 4 49999765 7999999999 79988 4
Q ss_pred hHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcc
Q 042286 205 RADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLM 284 (303)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~ 284 (303)
+...+.+....+..... ..|.. . +.. ++.+.+.+++.++|++++++ ...|+++.|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~------~~p~~--~------~~~-~~~~~~~~~~~~~i~~r~~~------~~~dll~~ll~~- 193 (367)
T 3b4x_A 136 DVKKVKDWSDLVALRLG------RADEI--F------SIG-RKYLELISFSKKELDSRKGK------EIVDLTGKIANS- 193 (367)
T ss_dssp CHHHHHHHHHHHHTTTT------STTGG--G------CCC-HHHHHHHHHHHHHHHHHTTT------CCSSHHHHHHTS-
T ss_pred cHHHHHHHHHHHHhccC------CChhh--H------HHH-HHHHHHHHHHHHHHHHHhcC------CCCCHHHHHHhc-
Confidence 23445555544432211 12211 1 112 56678889999999988764 246999999974
Q ss_pred cccCCCCCCCHHHHhhhc
Q 042286 285 DDANGEEKLTETEIKALL 302 (303)
Q Consensus 285 ~~~~~~~~l~~~ei~~~~ 302 (303)
.++++|+.+++
T Consensus 194 -------~ls~~el~~~~ 204 (367)
T 3b4x_A 194 -------NLSELEKEGYF 204 (367)
T ss_dssp -------SSCHHHHHHHH
T ss_pred -------cCCHHHHHHHH
Confidence 48899988764
No 73
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.74 E-value=2e-17 Score=134.16 Aligned_cols=192 Identities=16% Similarity=0.187 Sum_probs=134.7
Q ss_pred cchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCC-----cccc--cc--ccc-CCcceeeccCC
Q 042286 56 PHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPP-----NSGA--KH--IAY-NYQDIVFRPYG 125 (303)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~-----~~~~--~~--~~~-~~~~~~~~~~g 125 (303)
|+..+.+++ +||||+++ + +.+++++++++++++.++ ..|++++. .... .. ... .|.++++. +|
T Consensus 1 p~~~~~~lr-~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g 73 (368)
T 1io7_A 1 MYDWFSEMR-KKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTS-DP 73 (368)
T ss_dssp CHHHHHHHH-HHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGC-CT
T ss_pred CCHHHHHHH-hcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccC-CC
Confidence 456777884 79999987 3 588999999999999864 46877653 1100 11 111 11455555 59
Q ss_pred hHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCCh
Q 042286 126 PRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDP 204 (303)
Q Consensus 126 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (303)
+.|+++|++++ ++|++..++.+.+.+.+.++.+++.+ . .| ++|+.+.+ ..+++++++.+ ||.+.+.
T Consensus 74 ~~h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~-~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~-------- 140 (368)
T 1io7_A 74 PLHDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-D-PR-EDDIVKKLAVPLPIIVISKI-LGLPIED-------- 140 (368)
T ss_dssp THHHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-C-TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGG--------
T ss_pred hHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-h-cC-CccHHHHHHHHHHHHHHHHH-hCCCHHH--------
Confidence 99999999998 99999999999999999999999999 3 34 79999876 78999999999 9987652
Q ss_pred hHHHHHHHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcc
Q 042286 205 RADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLM 284 (303)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~ 284 (303)
.+.+.+....+. . .. ..|. ..++..++.+.+.+++.++| + ...|+++.|+++
T Consensus 141 -~~~~~~~~~~~~---~---~~-~~p~--------~~~~~~~~~~~~~~~~~~~i-----~------~~~d~l~~ll~~- 192 (368)
T 1io7_A 141 -KEKFKEWSDLVA---F---RL-GKPG--------EIFELGKKYLELIGYVKDHL-----N------SGTEVVSRVVNS- 192 (368)
T ss_dssp -HHHHHHHGGGCT---T---SC-CCTT--------CHHHHHHHHHHHHHHHHHHT-----T------SSCHHHHHHHTS-
T ss_pred -HHHHHHHHHHHH---h---cc-CChH--------HHHHHHHHHHHHHHHHHHHh-----C------CCCCHHHHHHhc-
Confidence 223332221111 0 00 0121 12455667777888887777 1 145899999974
Q ss_pred cccCCCCCCCHHHHhhhc
Q 042286 285 DDANGEEKLTETEIKALL 302 (303)
Q Consensus 285 ~~~~~~~~l~~~ei~~~~ 302 (303)
.++++|+.+++
T Consensus 193 -------~l~~~ei~~~~ 203 (368)
T 1io7_A 193 -------NLSDIEKLGYI 203 (368)
T ss_dssp -------SCCHHHHHHHH
T ss_pred -------cCCHHHHHHHH
Confidence 47888887764
No 74
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.73 E-value=3.2e-17 Score=131.70 Aligned_cols=180 Identities=17% Similarity=0.122 Sum_probs=126.9
Q ss_pred HhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHHHHHHHHHHHhhcChhh
Q 042286 65 RTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKA 144 (303)
Q Consensus 65 ~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~ 144 (303)
++||||+++ | .++|++|+++++++.++ ..|++++....... .+.++++. +|+.|+++|++++ ++|++.+
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~---~~~~l~~~-~g~~~~~~R~~~~-~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA---GGISFITM-DNPEHKEFRDISA-PYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGGC-CHHHHHHHHHHHH-HHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc---cccccccC-CchHHHHHHHHhh-hhcCHHH
Confidence 579999986 3 89999999999999875 46777652111111 23456655 5999999999998 9999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCChhHHHHHHHHHHHHHHhcCC
Q 042286 145 LDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVF 223 (303)
Q Consensus 145 l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (303)
++.+.+.+.+.++.+++.+. ++|+.+.+ ..+++++++.+ ||.+.+ +...+.+....+.. ..
T Consensus 71 l~~~~~~i~~~~~~l~~~l~-----~~d~~~~~~~~~~~~vi~~~-~G~~~~---------~~~~~~~~~~~~~~---~~ 132 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID-----NKDIISEYAVRLPVNIISKI-LGIPDS---------DMPLFKLWSDYIIG---NK 132 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT-----TSCHHHHTTTHHHHHHHHHH-HTCCGG---------GHHHHHHHHHHHHT---SC
T ss_pred HHHHHHHHHHHHHHHHHhcc-----ccCHHHHHhhhhhHHHHHHH-cCCCHH---------HHHHHHHHHHHHhh---cc
Confidence 99999999999999998874 68998865 89999999998 998765 23445544444331 11
Q ss_pred ccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCCCCCCCHHHHhhhc
Q 042286 224 NVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDANGEEKLTETEIKALL 302 (303)
Q Consensus 224 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 302 (303)
.|.+. ..++. ++.+.+.+++.++| ..| ++.|+++..+ ++ .++++|+.+++
T Consensus 133 -----~p~~~------~~~~~-~~~~~~~~~~~~~i-------------~~d-l~~ll~~~~~--~~-~l~~~ei~~~~ 182 (343)
T 2rfb_A 133 -----RDENF------NYVNN-RMVSRLLEIFKSDS-------------HGI-INVLAGSSLK--NR-KLTMDEKIKYI 182 (343)
T ss_dssp -----CSSHH------HHHHH-HHHHHHHHHHHSCC-------------SSH-HHHHHTCBCS--SS-BCCHHHHHHHH
T ss_pred -----Ccchh------hHHHH-HHHHHHHHHHHHHH-------------hcc-HHHHHhhhcC--CC-CCCHHHHHHHH
Confidence 12210 11234 55566666665554 247 9999986543 33 69999998765
No 75
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.70 E-value=1.4e-15 Score=125.00 Aligned_cols=212 Identities=12% Similarity=0.118 Sum_probs=144.6
Q ss_pred CCCcchhHHHHHHhcC-CcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccccccccCCcceeeccCChHHHHH
Q 042286 53 GPMPHQSIAGLARTHG-PLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRML 131 (303)
Q Consensus 53 ~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 131 (303)
..+++..+.++++..+ ++++...+| ..++|++++++++++.+ .+.|++...... ..........+...||++|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d-~~~fs~~~~~~~-~~~~~~~~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSD-PTRFSSEVIFLP-KEAGEKAQMVPTKMDPPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC-TTTEESSCCSSS-TTSSCSSCTTTTTCCTTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcC-chhccCCCcccc-cccccccccCcccCCcHHHHHH
Confidence 3567788888887643 455543333 57889999999999965 345765432211 1111112334445569999999
Q ss_pred HHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHHHHHHHHhcccccCCCCCCCChhHHHHH
Q 042286 132 RKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVNALGRVMLGFRVFGDGTGGSDPRADEFK 210 (303)
Q Consensus 132 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~ 210 (303)
|++++ ++|++++++.+.+.+.+.++++++.+.. ++.+|+...+ ..++..+++.+ +|.+.. +...+.
T Consensus 113 Rrll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~~--~g~~D~v~~~a~~l~~~vi~~l-lg~~~~---------d~~~~~ 179 (417)
T 4dxy_A 113 RKALD-KGLNLAKIRKVEDKVREVASSLIDSFAA--RGECDFAAEYAELFPVHVFMAL-ADLPLE---------DIPVLS 179 (417)
T ss_dssp HHHHH-HHHCHHHHHTTHHHHHHHHHHHHHHHHT--TSEEEHHHHTTTTHHHHHHHHH-TTCCGG---------GHHHHH
T ss_pred HHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCeeeHHHHHhhhHHHHHHHH-cCCCHH---------HHHHHH
Confidence 99999 9999999999999999999999999973 3467865554 55777777765 787654 344555
Q ss_pred HHHHHHHHHhcCCccccccccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHhcccccCCC
Q 042286 211 SMVVELMVLAGVFNVGDFVPALERLDLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKHTDLLGTLISLMDDANGE 290 (303)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~ 290 (303)
+....+..... .. ..........+...+.+++.+++++|+++. ..|+++.|+.+..+ ++
T Consensus 180 ~~~~~~~~~~~------~~-------~~~~~~~~~~~~~~~~~~~~~li~~rr~~~------~ddl~s~L~~~~~~--~~ 238 (417)
T 4dxy_A 180 EYARQMTRPEG------NT-------PEEMATDLEAGNNGFYAYVDPIIRARVGGD------GDDLITLMVNSEIN--GE 238 (417)
T ss_dssp HHHHHHHSCCC------SS-------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------CCSHHHHHHTCEET--TE
T ss_pred hhhhhhccccc------cC-------hHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------ccchhhhhcccccc--CC
Confidence 54444331100 00 112334566778889999999999887653 55999999987654 44
Q ss_pred CCCCHHHHhhhc
Q 042286 291 EKLTETEIKALL 302 (303)
Q Consensus 291 ~~l~~~ei~~~~ 302 (303)
.++++|+.+++
T Consensus 239 -~~~~~e~~~~~ 249 (417)
T 4dxy_A 239 -RIAHDKAQGLI 249 (417)
T ss_dssp -ECCHHHHHHHH
T ss_pred -ccchhHHHHHH
Confidence 68999998765
No 76
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.63 E-value=6.8e-15 Score=120.96 Aligned_cols=148 Identities=15% Similarity=0.143 Sum_probs=104.9
Q ss_pred CCCCcccccC---CCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcccc---ccccc
Q 042286 41 KPWPIVGNLP---HLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNSGA---KHIAY 114 (303)
Q Consensus 41 ~~~p~~g~~~---~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~---~~~~~ 114 (303)
.++|.+|--+ .+..||+..+.++++ +|||+++ .+.+.++|++++++++++.+. ..|++....... .....
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSCCS
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccccc
Confidence 3567766322 225689999999876 6999866 345688999999999999653 445443221111 11111
Q ss_pred CCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccH-HHHHHHHHHHHHHHHHhccc
Q 042286 115 NYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNL-AQRLNLCVVNALGRVMLGFR 193 (303)
Q Consensus 115 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~-~~~~~~~~~~vi~~~~fG~~ 193 (303)
...+.++..||++|+++|++++ ++|++++++.+.+.+.+.++++++.+... ++.+|+ .+....+++++++.+ +|.+
T Consensus 94 ~~~~~~~~~Dg~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~-~~~~D~v~~~~~~~~~~~i~~l-~g~~ 170 (412)
T 4dnj_A 94 RPPSLILEADPPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLAR-GGNIDAIADLAEAYPLSVFPDA-MGLK 170 (412)
T ss_dssp SCCCTTTTCCTTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEETCCCCCCHHHHHHHHHH-HTCC
T ss_pred cCCCccccCChHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhcc-CCCceeHHHHHhhhhHhHHHHH-cCCc
Confidence 1224455556999999999999 99999999999999999999999998754 345664 566677888888887 5654
Q ss_pred cc
Q 042286 194 VF 195 (303)
Q Consensus 194 ~~ 195 (303)
..
T Consensus 171 ~~ 172 (412)
T 4dnj_A 171 QE 172 (412)
T ss_dssp ST
T ss_pred hh
Confidence 43
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.44 E-value=2.1e-10 Score=92.46 Aligned_cols=132 Identities=17% Similarity=0.086 Sum_probs=85.2
Q ss_pred CCC-CCCCCcccccC-----CCCCCcchhHHHHHHhcCCcEEEEcCCeeEEEecCHHHHHHHHHHccccCCCCCCcc-cc
Q 042286 37 PPG-PKPWPIVGNLP-----HLGPMPHQSIAGLARTHGPLMYLRLGFVDVVVAASASVAAQFLKIHDSNFSNRPPNS-GA 109 (303)
Q Consensus 37 ~pg-p~~~p~~g~~~-----~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~ 109 (303)
||| ++++|++|... .+..+++..+.+++++ ||++.. .+.++|++++.+++|+.+ ..|++++... ..
T Consensus 36 ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~~ 108 (381)
T 2yjn_B 36 IRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPEW 108 (381)
T ss_dssp HHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCHH
T ss_pred CCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCccccccc
Confidence 566 44678888642 2456899999999975 998764 458999999999999986 3576653211 00
Q ss_pred -----cccccCCcceeeccCChHHHHHHHHHHHhhcChhhHHHhHHHHHHHHHHHHHHHHhcCCCcccHHHHH-HHHHHH
Q 042286 110 -----KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLARALASAGTEPVNLAQRL-NLCVVN 183 (303)
Q Consensus 110 -----~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~-~~~~~~ 183 (303)
......+.++++.+ |++| + ++|+ . .+.+.+.++++++.+. +.+|+...+ ..++++
T Consensus 109 ~~~~~~~~~~~~~~l~~~d-g~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~----g~~Dl~~~~a~~l~~~ 169 (381)
T 2yjn_B 109 MRAAGAPPAEWAQPFRDVH-AASW-------E-GEVP-----D-VGELAESFAGLLPGAG----ARLDLVGDFAWQVPVQ 169 (381)
T ss_dssp HHHHTCCHHHHTHHHHHHH-HCCC-------C-SCCC-----C-CSCHHHHTSTTSCC----------CCCCCCTHHHHH
T ss_pred ccccccccchhhhhhhhCC-chhh-------h-hccC-----C-hHHHHHHHHHHHHhcc----CcchHHHHHHHHHHHH
Confidence 00110123555555 9999 5 8888 3 7788888999888885 368888665 699999
Q ss_pred HHHHHHhccccc
Q 042286 184 ALGRVMLGFRVF 195 (303)
Q Consensus 184 vi~~~~fG~~~~ 195 (303)
+|+++ ||.+.+
T Consensus 170 vi~~l-~G~~~~ 180 (381)
T 2yjn_B 170 GMTAV-LGAAGV 180 (381)
T ss_dssp HHHTC------C
T ss_pred HHHHH-cCCCHH
Confidence 99995 998875
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.67 E-value=6 Score=24.47 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=37.4
Q ss_pred CcccccCCCCC--CcchhHHHHHHhcC-CcEEEEcCCeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGP--MPHQSIAGLARTHG-PLMYLRLGFVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~--~~~~~~~~~~~~yG-~i~~~~~~~~~~v~v~~p~~i~~i~~~ 95 (303)
-+++|+..-.. .....+.++..+|| +|..+ .+|.-+|...+.+.++..+..
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHH
Confidence 34888876411 22334678889995 99888 568899999999999888754
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=67.00 E-value=20 Score=22.27 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=35.4
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC--------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG--------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|+++. .-....+.++..+||+|..+.+. |--+|...+++.++.++..
T Consensus 14 lfV~~Lp~--~~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 14 VYIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp EEEECCCT--TCCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEEECCCC--CCCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 35676654 23345678888899998777652 4467777899999998863
No 80
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=64.99 E-value=20 Score=21.47 Aligned_cols=53 Identities=15% Similarity=0.116 Sum_probs=36.0
Q ss_pred CCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC----CeeEEEecCHHHHHHH
Q 042286 38 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG----FVDVVVAASASVAAQF 92 (303)
Q Consensus 38 pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~v~~p~~i~~i 92 (303)
+-|+..-++|++.. .--...+.++..+||+|..+.+. |--+|...+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~--~~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTE--DMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCT--TCCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCC--CCCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 33444556788764 23345678888999999888764 5567888899988753
No 81
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=63.29 E-value=20 Score=20.83 Aligned_cols=51 Identities=22% Similarity=0.181 Sum_probs=35.0
Q ss_pred cccccCCCCCC----cchhHHHHHHhcCCcEEEEcC-------CeeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPM----PHQSIAGLARTHGPLMYLRLG-------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~ 95 (303)
++|+++.-..+ ....+.++..+||+|..+.+. |--.|-..+++.++..+..
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 45666543222 336678888899999887764 4456777899988888753
No 82
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=55.63 E-value=35 Score=21.37 Aligned_cols=58 Identities=22% Similarity=0.280 Sum_probs=39.9
Q ss_pred CCCCCCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC------CeeEEEecCHHHHHHHHHH
Q 042286 36 LPPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 36 ~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------~~~~v~v~~p~~i~~i~~~ 95 (303)
.||.|...-++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 34555445578887642 3345678888899999877651 3467788899988888763
No 83
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=54.63 E-value=27 Score=19.69 Aligned_cols=39 Identities=8% Similarity=0.043 Sum_probs=28.5
Q ss_pred chhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 57 HQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
...+.++..+||+|..+.+. |--.|...+++.++..+..
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~ 60 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 60 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTT
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHh
Confidence 45677888889998777652 2356677888888888864
No 84
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=53.64 E-value=39 Score=21.29 Aligned_cols=50 Identities=10% Similarity=0.110 Sum_probs=35.3
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++..- --...+.++..+||+|..+.+. |--+|-..+++.++..+..
T Consensus 8 lfV~nLp~~--~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS--IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC--CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 467777642 2345678888999998776542 2347778899999888754
No 85
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=48.13 E-value=49 Score=20.83 Aligned_cols=50 Identities=18% Similarity=0.138 Sum_probs=36.7
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC--CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG--FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++..- --...+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 19 l~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 19 VVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp EEEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 467777642 3345678888999999887763 5677788899998888763
No 86
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=47.03 E-value=46 Score=20.18 Aligned_cols=50 Identities=18% Similarity=0.280 Sum_probs=34.6
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLK 94 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 94 (303)
|-++||+.. .---..+.++..+||+|..+++. |--.|-..+++.++....
T Consensus 9 wL~VgNL~~--~~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 9 WLLLKNLTA--QIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp EEEEECCCT--TCCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred eEEEeCCCc--cCCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 456777754 23346788999999999877642 556677778876666654
No 87
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=46.58 E-value=49 Score=20.35 Aligned_cols=53 Identities=21% Similarity=0.142 Sum_probs=37.5
Q ss_pred CCcccccCCCCCC----cchhHHHHHHhcCCcEEEEcC-------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPM----PHQSIAGLARTHGPLMYLRLG-------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|+++.-..+ ....+.++..+||+|..+.+. |--+|...+++.++..+..
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 3468887753222 346688888999999888764 4556777888888887764
No 88
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=45.48 E-value=25 Score=17.08 Aligned_cols=6 Identities=17% Similarity=0.556 Sum_probs=2.9
Q ss_pred CCchhH
Q 042286 1 MSTLPL 6 (303)
Q Consensus 1 ~~~~~~ 6 (303)
|.++..
T Consensus 1 M~~l~i 6 (36)
T 1pi7_A 1 MQPIQI 6 (36)
T ss_pred Cchhhh
Confidence 455544
No 89
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=44.05 E-value=42 Score=18.85 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=27.7
Q ss_pred chhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHH
Q 042286 57 HQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLK 94 (303)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 94 (303)
...+.++..+||+|..+.+. |--.|-..+++.++.++.
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 59 (75)
T 2mss_A 13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 59 (75)
T ss_dssp HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHS
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 45577888899998777542 235566789999888875
No 90
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.85 E-value=63 Score=20.23 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=38.0
Q ss_pred CCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHH
Q 042286 40 PKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLK 94 (303)
Q Consensus 40 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 94 (303)
|...-++|++..- --...+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 15 ~~~~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 15 PSRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCEEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 3334567887642 3345678889999999877653 456788889998888876
No 91
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=37.25 E-value=77 Score=19.95 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=37.0
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcC-CcEEEEcC-----CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHG-PLMYLRLG-----FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~-----~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|++.. .--...+.++..+|| .|..+.+. |.-+|-..+++.++..+..
T Consensus 30 ~l~VgnLp~--~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPE--GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSC--CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 346787764 334567788889999 78776653 5577888899999888754
No 92
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=35.51 E-value=81 Score=19.68 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=35.8
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
--++|++.. .--...+.++..+||+|..+.+. |--+|...+++.++..+..
T Consensus 8 ~lfV~nL~~--~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 8 EVTFARLND--NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 346777764 23456678888999999877642 2346778899999888764
No 93
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.29 E-value=79 Score=19.47 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=37.1
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC--CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG--FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++.. .-....+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 18 l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCS--SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 36777764 33456678888999998877653 5677888899999888864
No 94
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=34.98 E-value=78 Score=20.53 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=34.2
Q ss_pred CcccccCCCCC--CcchhHHHHHHhcCCcEEEEcC------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGP--MPHQSIAGLARTHGPLMYLRLG------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~--~~~~~~~~~~~~yG~i~~~~~~------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++..-.. +....+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 32 LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 32 VLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 45777764211 1122355788899999877652 4567888899988888754
No 95
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.60 E-value=68 Score=18.51 Aligned_cols=50 Identities=16% Similarity=0.047 Sum_probs=33.3
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLK 94 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~ 94 (303)
.-++|+++.- -....+.++..+||+|..+.+. |--+|...+++.++..+.
T Consensus 7 ~l~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3456776542 2345567777889998777542 235677789998888775
No 96
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=32.65 E-value=85 Score=19.05 Aligned_cols=50 Identities=22% Similarity=0.187 Sum_probs=34.2
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-----C----eeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-----F----VDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-----~----~~~v~v~~p~~i~~i~~~ 95 (303)
-++|+++.- --...+.++..+||+|..+.+. + --+|-..+++.++..+..
T Consensus 22 lfV~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQN--MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 467777642 2345678888999998776542 1 235677899988888754
No 97
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=31.27 E-value=93 Score=19.30 Aligned_cols=39 Identities=8% Similarity=0.015 Sum_probs=28.9
Q ss_pred chhHHHHHHhcCCcEEEEcCC-eeEEEecCHHHHHHHHHH
Q 042286 57 HQSIAGLARTHGPLMYLRLGF-VDVVVAASASVAAQFLKI 95 (303)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~~-~~~v~v~~p~~i~~i~~~ 95 (303)
..-+.++...||.+.--|+-. .-.+++.+|+.+++++..
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 345677788899766556643 567788999999999873
No 98
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.12 E-value=84 Score=18.54 Aligned_cols=51 Identities=12% Similarity=0.001 Sum_probs=34.7
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|+++.- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 17 CLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3457776542 3345678888999998777652 1245667899998888764
No 99
>3omy_A Protein TRAM; DNA binding protein, dimer, bacterial conjugation, ribbon-HE helix, transcriptional repressor, DNA; 1.30A {Escherichia coli} SCOP: a.55.1.0
Probab=31.02 E-value=64 Score=17.12 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHh
Q 042286 250 RFDVFLSDILEERKMNGRDGGNKHTDLLGTLIS 282 (303)
Q Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~ 282 (303)
.+.+-+..++++|+++.+. +..-.+..+.|++
T Consensus 11 ~v~~~I~~iVe~r~qeGA~-dvs~Ssv~smLle 42 (52)
T 3omy_A 11 NVYEQITDLVTIRKQEGIE-EASLSNVSSMLLE 42 (52)
T ss_dssp HHHHHHHHHHHHHHHTTCT-TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcc-cccHHHHHHHHHH
Confidence 4455677888888887553 3333455666665
No 100
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.93 E-value=98 Score=19.24 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=35.1
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~~ 95 (303)
++|++.. .-....+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 14 ~V~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~ 65 (111)
T 1whx_A 14 LAKNLPA--GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRH 65 (111)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHH
Confidence 4666653 23455678888999999888763 4567777899988887754
No 101
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=30.65 E-value=1.3e+02 Score=20.66 Aligned_cols=49 Identities=18% Similarity=0.148 Sum_probs=34.5
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC-----CeeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-----FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-----~~~~v~v~~p~~i~~i~~~ 95 (303)
++||+.. .--...+.++..+||+|-++.+. +.-+|-..+++.++.....
T Consensus 50 ~VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 3677653 23345678889999998777653 2467777899888877764
No 102
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.64 E-value=96 Score=19.06 Aligned_cols=39 Identities=21% Similarity=0.167 Sum_probs=30.7
Q ss_pred chhHHHHHHhcCCcEEEEcC----CeeEEEecCHHHHHHHHHH
Q 042286 57 HQSIAGLARTHGPLMYLRLG----FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~----~~~~v~v~~p~~i~~i~~~ 95 (303)
...+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 56778889999999887763 4567778899999888865
No 103
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=30.44 E-value=1.1e+02 Score=19.46 Aligned_cols=50 Identities=12% Similarity=0.038 Sum_probs=35.6
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++.. .-....+.++..+||+|..+.+. +.-+|...+++.++.++..
T Consensus 25 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 83 (126)
T 3ex7_B 25 LFVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 83 (126)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35677654 23355677888899999887652 3457778899999888853
No 104
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.33 E-value=1.1e+02 Score=19.62 Aligned_cols=50 Identities=12% Similarity=0.114 Sum_probs=36.1
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLK 94 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 94 (303)
.-++|++..- --...+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 33 ~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3467887642 3345678889999998777653 556777788888888775
No 105
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.86 E-value=88 Score=18.40 Aligned_cols=50 Identities=18% Similarity=0.149 Sum_probs=35.8
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++.. .-....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 13 l~V~nLp~--~~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 13 LHVGNISP--TCTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEEESCCS--SCCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 45777754 23456678888999999887764 4556677889988888753
No 106
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=28.24 E-value=1.1e+02 Score=18.92 Aligned_cols=38 Identities=8% Similarity=-0.063 Sum_probs=26.7
Q ss_pred hhHHHHHHhcCCcEEEEcC-----------CeeEEEecCHHHHHHHHHH
Q 042286 58 QSIAGLARTHGPLMYLRLG-----------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 58 ~~~~~~~~~yG~i~~~~~~-----------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-+.+...+||+|..+.+. |.-.|-..+++.++.....
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~ 78 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQG 78 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHH
Confidence 3456677789999888763 3346777888887777643
No 107
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=27.51 E-value=1.1e+02 Score=18.60 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=33.9
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 27 ~V~nlp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 27 FVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 5677654 23345678888999998777652 2345667899988888764
No 108
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=27.40 E-value=1.5e+02 Score=20.09 Aligned_cols=50 Identities=12% Similarity=0.022 Sum_probs=34.6
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|+++. .-....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 75 l~V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 75 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 35677654 23456678888999998776552 3356667888988888754
No 109
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.31 E-value=1e+02 Score=18.35 Aligned_cols=48 Identities=17% Similarity=0.087 Sum_probs=34.7
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++ .--...+.++..+||+|..+.+. +.-+|...+++.+...+..
T Consensus 18 l~V~n~----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 18 LYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEECS----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEcCC----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 456773 23356678888999999887764 4566777899998888754
No 110
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=27.04 E-value=1.3e+02 Score=19.39 Aligned_cols=51 Identities=12% Similarity=0.001 Sum_probs=35.4
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 48 ~l~V~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 48 CLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CBCEETCTTS--CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3456776542 3345678888999998777652 2356777899999888864
No 111
>2ahq_A Sigma-54, RNA polymerase sigma factor RPON; sigma-54,sigma factors, solution structure, transcription; NMR {Aquifex aeolicus} PDB: 2o8k_A 2o9l_A
Probab=26.95 E-value=46 Score=19.46 Aligned_cols=11 Identities=27% Similarity=0.525 Sum_probs=7.1
Q ss_pred CCCHHHHhhhc
Q 042286 292 KLTETEIKALL 302 (303)
Q Consensus 292 ~l~~~ei~~~~ 302 (303)
+|||++|...+
T Consensus 37 PlSD~~I~~~L 47 (76)
T 2ahq_A 37 PYSDQEIANIL 47 (76)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 67777776543
No 112
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=26.90 E-value=1.1e+02 Score=18.68 Aligned_cols=49 Identities=12% Similarity=0.038 Sum_probs=35.2
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 30 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 30 FVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEESCCT--TCCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 5777654 23345678888999999887763 3457777899998888763
No 113
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=26.87 E-value=97 Score=17.89 Aligned_cols=51 Identities=12% Similarity=0.125 Sum_probs=34.4
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|+++.- -....+.++..+||+|..+.+. |--+|...+++.++..+..
T Consensus 13 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 13 KMFVGGLSWD--TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp EEEEECCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 3467777642 3455678888899998776542 1245667788888888754
No 114
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.67 E-value=1e+02 Score=18.03 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=36.2
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|++.. .-....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 10 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~ 61 (90)
T 2dnq_A 10 KLFIGNLPR--EATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRN 61 (90)
T ss_dssp EEEEESCCS--SCCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 345677654 23345678888999998777653 5567778899998888753
No 115
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=25.77 E-value=1.5e+02 Score=20.96 Aligned_cols=51 Identities=18% Similarity=0.127 Sum_probs=35.9
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|++..- --...+.++.++||+|..+.+. |.-+|-..+++.+...+..
T Consensus 17 tlfVgnLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 17 SLYVGDLHPD--VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp EEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 3467887642 3355678888999999776541 2357777899998888764
No 116
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=25.55 E-value=1.3e+02 Score=18.86 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=34.9
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC--------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG--------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 10 l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 10 LFIGGLNR--ETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEEECCTT--TCCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 35677654 23345678888999998776542 3456777899999888864
No 117
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=25.48 E-value=1.1e+02 Score=21.63 Aligned_cols=49 Identities=16% Similarity=0.237 Sum_probs=34.2
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC--------CeeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG--------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~ 95 (303)
++|+++. ......+.++..+||+|..+.+. |--+|-..+++.++..+..
T Consensus 113 ~V~nLp~--~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~ 169 (193)
T 2voo_A 113 YIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 169 (193)
T ss_dssp EEECCCT--TCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHC
T ss_pred EecCCCC--cCCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHh
Confidence 4566653 34456788888999998776542 3456677899999988854
No 118
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.44 E-value=1.3e+02 Score=18.97 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=35.9
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLK 94 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 94 (303)
.-++||+..- +-....+.++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 27 ~l~V~NLp~~-~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 27 VIHLSNLPHS-GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp EEEEESCCCS-SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred EEEEeCCCCc-cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 4467777641 12345678888999998877763 456777789988887775
No 119
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.06 E-value=1.3e+02 Score=18.65 Aligned_cols=47 Identities=9% Similarity=0.048 Sum_probs=31.8
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFL 93 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~ 93 (303)
++|++.. .-....+.++..+||+|..+.+. |.-+|...+++.++..+
T Consensus 29 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 84 (114)
T 2cq4_A 29 FCMQLAA--RIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 84 (114)
T ss_dssp EEESCCT--TCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHH
Confidence 4666653 22345678888899999887663 23466677888877777
No 120
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.98 E-value=96 Score=18.03 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=31.9
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC----CeeEEEecCHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG----FVDVVVAASASVAAQF 92 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~v~~p~~i~~i 92 (303)
++|+++.- -....+.++..+||+|..+.+. |--+|-..+++.++.+
T Consensus 9 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 9 FVGRCTGD--MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEESCCSS--SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEeCCCCC--CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 56666532 2345677888899999887763 3457777888888754
No 121
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=24.73 E-value=1.2e+02 Score=18.09 Aligned_cols=51 Identities=12% Similarity=0.243 Sum_probs=36.3
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEc-CCeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRL-GFVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++..- .-....+.++..+||+|..+.+ -+.-+|...+++.++..+..
T Consensus 13 l~V~nlp~~-~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 13 LFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEEESSTTS-CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 356777630 2234567888889999877765 35667888899999988864
No 122
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=24.56 E-value=1.2e+02 Score=18.17 Aligned_cols=48 Identities=19% Similarity=0.102 Sum_probs=32.8
Q ss_pred ccccCCCCCCcchhHHHHHHhcCCcEEEEc----CCeeEEEecCHHHHHHHHHH
Q 042286 46 VGNLPHLGPMPHQSIAGLARTHGPLMYLRL----GFVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 46 ~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~----~~~~~v~v~~p~~i~~i~~~ 95 (303)
+|++.. .-....+.++..+||+|..+.+ -+--+|-..+++.++..+..
T Consensus 5 V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 5 VGNLGT--GAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp EECCCS--SCSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred EeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 455543 2234567788889999877664 24567777899998888763
No 123
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.40 E-value=1.3e+02 Score=18.53 Aligned_cols=55 Identities=7% Similarity=-0.048 Sum_probs=37.5
Q ss_pred CCCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHHH
Q 042286 40 PKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 40 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~~ 95 (303)
|...-++|++..- .--...+.++..+||.|..+.+. +.-+|-..+++.+..+...
T Consensus 14 p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 71 (102)
T 1x4d_A 14 TRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDY 71 (102)
T ss_dssp CCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 3334567887641 12334577888899999888764 3467888899988887753
No 124
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.37 E-value=1e+02 Score=19.13 Aligned_cols=51 Identities=10% Similarity=0.065 Sum_probs=33.5
Q ss_pred CCcccccCCCCCCcchhHH---HHHHhcCCcEEEEcC------------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIA---GLARTHGPLMYLRLG------------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~---~~~~~yG~i~~~~~~------------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|+++.- -....+. ++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 17 ~l~V~nLp~~--~~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~ 82 (111)
T 2cpi_A 17 LVFVVGLSQR--LADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQC 82 (111)
T ss_dssp CEEEEEECTT--TCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHH
Confidence 3467777642 2233455 777889998776543 2456677899988888765
No 125
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=23.97 E-value=1.3e+02 Score=18.51 Aligned_cols=53 Identities=6% Similarity=-0.145 Sum_probs=32.1
Q ss_pred CCcccccCC---CCCCcchhHHHHHHhcCCcEEEEcC----------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPH---LGPMPHQSIAGLARTHGPLMYLRLG----------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~---~~~~~~~~~~~~~~~yG~i~~~~~~----------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++.|+.. +..+...-+.+...+||+|..+.+. |.-+|-..+++.+......
T Consensus 10 ~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~ 75 (105)
T 2pe8_A 10 VVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVD 75 (105)
T ss_dssp EEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHH
T ss_pred EEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHH
Confidence 445566542 1234556777888899998776542 2345566788877776653
No 126
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=23.53 E-value=1.2e+02 Score=17.94 Aligned_cols=36 Identities=6% Similarity=0.019 Sum_probs=24.8
Q ss_pred hHHHHHHhcCCc---EEEEcCCeeEEEecC-----HHHHHHHHH
Q 042286 59 SIAGLARTHGPL---MYLRLGFVDVVVAAS-----ASVAAQFLK 94 (303)
Q Consensus 59 ~~~~~~~~yG~i---~~~~~~~~~~v~v~~-----p~~i~~i~~ 94 (303)
...++++.|.++ +++..++.+-+.|++ .+.+.++++
T Consensus 25 L~kRl~~~fpd~~~~V~Vr~~s~n~lsV~g~~k~dKe~i~eiLq 68 (81)
T 1ghh_A 25 LSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQ 68 (81)
T ss_dssp HHHHHHHHCSSSCCEEEEEEESSCEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCceEEEeecCCCceeecCCChhHHHHHHHHHH
Confidence 456788889885 899888777887743 344555554
No 127
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.48 E-value=1.3e+02 Score=18.12 Aligned_cols=53 Identities=13% Similarity=0.019 Sum_probs=35.7
Q ss_pred CCCCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-------CeeEEEecCHHHHHHHHHH
Q 042286 41 KPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 41 ~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~ 95 (303)
...-++|++..- -....+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 15 ~~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 15 VVNLYVKNLDDG--IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp CCCEEEECCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 334567777642 2345577888889998776653 2346677899998888764
No 128
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.41 E-value=1.3e+02 Score=18.11 Aligned_cols=49 Identities=18% Similarity=0.273 Sum_probs=32.6
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 12 ~V~nlp~--~~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 12 FVGNIPY--EATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp EEESCCT--TSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEeCCCC--cCCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4566653 23345678888899998666542 2345666899999888854
No 129
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.71 E-value=1.4e+02 Score=18.27 Aligned_cols=50 Identities=12% Similarity=0.146 Sum_probs=36.0
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLK 94 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~ 94 (303)
.-++|++.. .--...+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 17 ~l~V~nLp~--~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 17 VLHIRKLPG--EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp EEEEESCCT--TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 456788764 23345677888899999877653 456778889998888775
No 130
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=22.53 E-value=1.4e+02 Score=18.06 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=36.5
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 13 ~l~V~nl~~~--~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 13 VLFVRNLANT--VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CEEEECCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 3456776542 3345678888899999888763 4567777899999888764
No 131
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=22.49 E-value=1.2e+02 Score=17.61 Aligned_cols=50 Identities=22% Similarity=0.272 Sum_probs=34.2
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|+++. .-....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 11 l~V~nlp~--~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 11 IFVRNLPF--DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEECSCCT--TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 35677654 23455678888899998776542 2345667789988888764
No 132
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=22.15 E-value=1.7e+02 Score=19.10 Aligned_cols=49 Identities=16% Similarity=0.086 Sum_probs=34.1
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcCC-----eeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGF-----VDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~-----~~~v~v~~p~~i~~i~~~ 95 (303)
++||+.. .--...+.++..+||+|.++.+.. .-+|...+++.++.....
T Consensus 32 ~V~NL~~--~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 32 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEESCCS--CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCC--CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 4777753 233456788899999987776532 367778888887777653
No 133
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.92 E-value=1.5e+02 Score=18.39 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=33.7
Q ss_pred cccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 45 IVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 45 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
++|++.. .-....+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 31 ~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 31 FIGGLSF--ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp EEECCTT--CCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 5666653 23345678888999998766542 2456777899999988865
No 134
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=21.85 E-value=99 Score=19.59 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=25.1
Q ss_pred hHHHHHHhcCCcEEEEcC-----CeeEEEecCHHHHHHHHHH
Q 042286 59 SIAGLARTHGPLMYLRLG-----FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 59 ~~~~~~~~yG~i~~~~~~-----~~~~v~v~~p~~i~~i~~~ 95 (303)
-+.+...+||.|..+.+. |.-+|-..+++.++.....
T Consensus 33 dl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~ 74 (114)
T 3s6e_A 33 DVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 74 (114)
T ss_dssp HHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHH
T ss_pred HHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHH
Confidence 345566789999777652 4456667788887776653
No 135
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.63 E-value=1.4e+02 Score=17.92 Aligned_cols=50 Identities=24% Similarity=0.078 Sum_probs=35.0
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC-------CeeEEEecCHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG-------FVDVVVAASASVAAQFLK 94 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~v~~p~~i~~i~~ 94 (303)
.-++|++.. .-....+.++..+||+|..+.+. +.-+|...+++.++..+.
T Consensus 17 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 17 TLYVGNLSR--DVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEEESCCT--TCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCc--cCCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 345777664 23455678888999998776552 345677789999888876
No 136
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=21.43 E-value=1.3e+02 Score=17.29 Aligned_cols=50 Identities=18% Similarity=0.107 Sum_probs=33.8
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++.. .-....+.++..+||+|..+.+. |--+|-..+++.++..+..
T Consensus 9 l~v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSP--EITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35666654 23345678888899998776542 1345667899998888764
No 137
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.41 E-value=1.4e+02 Score=17.80 Aligned_cols=51 Identities=22% Similarity=0.242 Sum_probs=35.0
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC--------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG--------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 19 ~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 19 KLFISGLPFS--CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 3456776542 3345678888899998776652 2356777899999888754
No 138
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=21.10 E-value=1.5e+02 Score=17.90 Aligned_cols=51 Identities=16% Similarity=0.049 Sum_probs=34.9
Q ss_pred CCcccccCCCCCCcchhHHHHHHhcCCcEEEEcC--------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG--------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~l~v~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 17 KLFVGMLNKQ--QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 3457777642 2345678888899998776653 2345667899988888753
No 139
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=20.81 E-value=1.6e+02 Score=18.13 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=34.5
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++.. .-....+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 29 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 87 (108)
T 2jrs_A 29 LYVGSLHF--NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 87 (108)
T ss_dssp EEEECCCS--SCCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35777654 23455678888999998776542 2356777899999888853
No 140
>1b35_D CRPV, protein (cricket paralysis virus, VP4); insect picorna-like virus, icosahedral virus; 2.40A {Cricket paralysis virus} SCOP: b.121.4.1
Probab=20.66 E-value=88 Score=16.25 Aligned_cols=27 Identities=26% Similarity=0.351 Sum_probs=13.7
Q ss_pred CCCcccccCCCCCCcchhHHHHHHhcC
Q 042286 42 PWPIVGNLPHLGPMPHQSIAGLARTHG 68 (303)
Q Consensus 42 ~~p~~g~~~~~~~~~~~~~~~~~~~yG 68 (303)
.+|++||+..-..-......++.+-+|
T Consensus 30 ~ipilgn~fs~pawisa~~~~~~k~~g 56 (57)
T 1b35_D 30 HIPVLGNIFSTPAWISAKAADLAKLFG 56 (57)
T ss_dssp CCCCSCCSSSSCTTCCCCHHHHHHHTT
T ss_pred ccccccccccchHHHHHHHHHHHHHhC
Confidence 378889876532222223344444443
No 141
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=20.55 E-value=1.4e+02 Score=17.57 Aligned_cols=53 Identities=15% Similarity=0.102 Sum_probs=34.9
Q ss_pred CCcccccCCCC--CCcchhHHHHHHhcCCcEEEEcC------CeeEEEecCHHHHHHHHHH
Q 042286 43 WPIVGNLPHLG--PMPHQSIAGLARTHGPLMYLRLG------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 43 ~p~~g~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~------~~~~v~v~~p~~i~~i~~~ 95 (303)
.-++|++..-. .+....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 10 ~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 34577765421 11112333888999999887654 5567888899988888764
No 142
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=20.40 E-value=1.3e+02 Score=19.04 Aligned_cols=48 Identities=17% Similarity=0.087 Sum_probs=33.6
Q ss_pred CcccccCCCCCCcchhHHHHHHhcCCcEEEEcC---CeeEEEecCHHHHHHHHHH
Q 042286 44 PIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLG---FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 44 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~v~~p~~i~~i~~~ 95 (303)
-++|++ .--...+.++..+||+|..+.+. |--+|...+++.+...+..
T Consensus 42 lfVgnl----~~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 42 LYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEECS----SCCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEcCC----CCCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 356763 23356678888999998776653 4567777899988888754
No 143
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=20.23 E-value=1.3e+02 Score=17.00 Aligned_cols=39 Identities=8% Similarity=-0.033 Sum_probs=28.1
Q ss_pred chhHHHHHHhcCCcEEEEcC---------CeeEEEecCHHHHHHHHHH
Q 042286 57 HQSIAGLARTHGPLMYLRLG---------FVDVVVAASASVAAQFLKI 95 (303)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~---------~~~~v~v~~p~~i~~i~~~ 95 (303)
...+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 15 ~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 15 DETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp HHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 45577888889998776542 2346777899998888764
No 144
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=20.09 E-value=61 Score=14.22 Aligned_cols=9 Identities=56% Similarity=1.147 Sum_probs=4.7
Q ss_pred CCCCCCCCC
Q 042286 36 LPPGPKPWP 44 (303)
Q Consensus 36 ~~pgp~~~p 44 (303)
.||||++-|
T Consensus 4 gppgprgqp 12 (31)
T 4gyx_A 4 GPPGPRGQP 12 (31)
T ss_dssp CCCCCCCCC
T ss_pred CCCCCCCCC
Confidence 355555544
Done!