Query 042288
Match_columns 515
No_of_seqs 385 out of 2962
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 04:45:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042288.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042288hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02177 glycerol-3-phosphate 100.0 7.6E-94 1.6E-98 757.6 50.2 492 9-506 3-496 (497)
2 PLN02499 glycerol-3-phosphate 100.0 3.4E-86 7.5E-91 682.2 46.6 486 24-515 4-492 (498)
3 PLN02588 glycerol-3-phosphate 100.0 1.1E-75 2.4E-80 601.2 42.4 465 24-502 46-524 (525)
4 KOG2848 1-acyl-sn-glycerol-3-p 100.0 8E-36 1.7E-40 279.2 17.9 182 278-478 61-256 (276)
5 TIGR01545 YfhB_g-proteo haloac 100.0 4.5E-34 9.7E-39 273.3 19.9 193 27-229 4-209 (210)
6 cd07991 LPLAT_LPCAT1-like Lyso 100.0 1.6E-33 3.5E-38 270.3 13.2 196 284-490 2-211 (211)
7 PRK15018 1-acyl-sn-glycerol-3- 100.0 8.7E-32 1.9E-36 262.7 21.9 175 282-477 41-229 (245)
8 PRK11590 hypothetical protein; 100.0 1.6E-30 3.4E-35 249.6 17.9 193 27-230 5-211 (211)
9 COG0560 SerB Phosphoserine pho 100.0 9.1E-31 2E-35 250.1 14.9 194 26-238 3-202 (212)
10 TIGR01490 HAD-SF-IB-hyp1 HAD-s 100.0 2.2E-29 4.8E-34 239.6 19.1 195 30-226 1-202 (202)
11 PLN02833 glycerol acyltransfer 100.0 4.8E-29 1E-33 255.5 20.6 196 282-490 140-350 (376)
12 PLN02901 1-acyl-sn-glycerol-3- 99.9 1.2E-27 2.6E-32 229.9 13.6 167 289-479 32-212 (214)
13 PTZ00261 acyltransferase; Prov 99.9 4E-26 8.6E-31 228.4 19.2 154 310-479 128-309 (355)
14 cd07992 LPLAT_AAK14816-like Ly 99.9 8.9E-25 1.9E-29 208.4 16.9 151 281-455 3-181 (203)
15 cd07988 LPLAT_ABO13168-like Ly 99.9 1.8E-24 3.9E-29 198.8 12.7 132 284-453 2-148 (163)
16 COG0204 PlsC 1-acyl-sn-glycero 99.9 2.5E-23 5.4E-28 204.7 16.0 152 282-454 40-206 (255)
17 PRK08043 bifunctional acyl-[ac 99.9 7.9E-23 1.7E-27 230.5 19.7 187 292-491 14-211 (718)
18 cd07986 LPLAT_ACT14924-like Ly 99.9 2.1E-23 4.6E-28 200.0 11.8 168 292-472 8-208 (210)
19 PRK06814 acylglycerophosphoeth 99.9 1.7E-22 3.7E-27 238.7 21.4 175 290-476 437-622 (1140)
20 PRK08633 2-acyl-glycerophospho 99.9 2.7E-22 5.9E-27 236.9 21.4 170 289-474 424-604 (1146)
21 PLN02783 diacylglycerol O-acyl 99.9 7.2E-22 1.6E-26 199.3 16.6 123 281-414 76-220 (315)
22 cd07993 LPLAT_DHAPAT-like Lyso 99.9 2.5E-22 5.5E-27 191.8 8.1 144 310-454 21-202 (205)
23 cd07987 LPLAT_MGAT-like Lysoph 99.9 8.7E-22 1.9E-26 189.1 11.7 175 292-477 5-207 (212)
24 PRK14014 putative acyltransfer 99.9 1.5E-20 3.3E-25 188.8 20.1 124 287-415 68-232 (301)
25 TIGR02137 HSK-PSP phosphoserin 99.9 3.1E-21 6.7E-26 183.5 14.3 175 28-231 1-180 (203)
26 TIGR00530 AGP_acyltrn 1-acyl-s 99.8 2.4E-20 5.1E-25 164.4 11.6 117 291-412 1-130 (130)
27 cd07985 LPLAT_GPAT Lysophospho 99.8 8.9E-20 1.9E-24 173.5 12.4 171 299-478 15-233 (235)
28 cd06551 LPLAT Lysophospholipid 99.8 4.2E-19 9.1E-24 166.6 16.8 162 289-477 9-186 (187)
29 PRK11133 serB phosphoserine ph 99.8 3.8E-19 8.2E-24 180.2 17.2 188 25-231 107-300 (322)
30 PRK03355 glycerol-3-phosphate 99.8 6.4E-20 1.4E-24 201.7 12.4 183 291-475 249-481 (783)
31 cd07983 LPLAT_DUF374-like Lyso 99.8 1.6E-19 3.5E-24 170.2 13.0 172 288-477 4-187 (189)
32 PF01553 Acyltransferase: Acyl 99.8 6.6E-21 1.4E-25 168.4 -0.1 115 293-412 1-132 (132)
33 PRK08238 hypothetical protein; 99.8 4E-19 8.6E-24 188.8 13.3 173 28-244 10-188 (479)
34 TIGR01488 HAD-SF-IB Haloacid D 99.8 1.2E-18 2.5E-23 162.0 14.2 171 30-214 1-177 (177)
35 TIGR03703 plsB glycerol-3-phos 99.8 2.4E-18 5.1E-23 191.0 13.0 161 293-455 275-472 (799)
36 PRK04974 glycerol-3-phosphate 99.8 2.5E-18 5.3E-23 191.0 12.6 161 293-455 285-482 (818)
37 cd07989 LPLAT_AGPAT-like Lysop 99.8 5.4E-18 1.2E-22 158.7 12.9 149 289-454 7-168 (184)
38 TIGR00338 serB phosphoserine p 99.7 8.4E-17 1.8E-21 155.0 16.2 189 27-231 13-204 (219)
39 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 1.1E-16 2.3E-21 151.9 16.0 185 28-231 4-199 (201)
40 PLN02510 probable 1-acyl-sn-gl 99.7 8.7E-17 1.9E-21 165.1 13.3 119 288-412 75-209 (374)
41 PF12710 HAD: haloacid dehalog 99.7 8.3E-16 1.8E-20 144.5 15.3 116 91-212 64-192 (192)
42 cd07990 LPLAT_LCLAT1-like Lyso 99.7 7.2E-17 1.6E-21 152.7 7.4 102 289-395 7-124 (193)
43 PLN02380 1-acyl-sn-glycerol-3- 99.6 5.5E-16 1.2E-20 159.2 10.4 103 288-392 63-181 (376)
44 PTZ00374 dihydroxyacetone phos 99.6 4.2E-16 9.1E-21 171.2 10.1 146 310-455 628-813 (1108)
45 smart00563 PlsC Phosphate acyl 99.6 7.3E-16 1.6E-20 132.8 9.2 101 313-413 1-117 (118)
46 TIGR03333 salvage_mtnX 2-hydro 99.6 3E-14 6.5E-19 137.0 15.0 182 31-238 2-195 (214)
47 cd07984 LPLAT_LABLAT-like Lyso 99.6 2.8E-14 6E-19 134.5 12.2 160 293-482 3-182 (192)
48 PRK11915 glycerol-3-phosphate 99.5 6.8E-15 1.5E-19 157.6 7.4 186 289-476 95-325 (621)
49 PRK09552 mtnX 2-hydroxy-3-keto 99.5 1.9E-13 4.1E-18 131.9 12.8 188 29-242 4-204 (219)
50 PLN02954 phosphoserine phospha 99.5 6.3E-13 1.4E-17 128.5 16.2 176 27-220 11-194 (224)
51 KOG1615 Phosphoserine phosphat 99.5 2.6E-13 5.7E-18 123.1 11.5 169 26-213 14-191 (227)
52 PRK13582 thrH phosphoserine ph 99.4 8.5E-12 1.8E-16 118.8 16.0 123 93-226 52-175 (205)
53 KOG2847 Phosphate acyltransfer 99.2 1.6E-11 3.5E-16 115.4 7.5 136 309-455 67-227 (286)
54 TIGR01489 DKMTPPase-SF 2,3-dik 99.2 4.9E-10 1.1E-14 104.8 17.1 120 94-219 57-186 (188)
55 KOG4666 Predicted phosphate ac 99.1 8.4E-11 1.8E-15 114.1 5.0 180 312-496 8-199 (412)
56 TIGR01544 HAD-SF-IE haloacid d 98.9 1E-08 2.2E-13 101.1 11.5 120 90-214 98-230 (277)
57 PF06888 Put_Phosphatase: Puta 98.9 5.7E-08 1.2E-12 93.9 15.3 166 30-212 2-186 (234)
58 KOG1505 Lysophosphatidic acid 98.8 2.1E-08 4.5E-13 102.2 8.9 78 309-386 69-162 (346)
59 KOG2898 Predicted phosphate ac 98.8 1.3E-08 2.8E-13 102.7 7.2 207 284-506 116-338 (354)
60 COG4359 Uncharacterized conser 98.7 1.5E-07 3.3E-12 85.2 12.5 170 28-220 3-184 (220)
61 PRK10826 2-deoxyglucose-6-phos 98.7 1.9E-07 4E-12 90.2 14.3 97 116-224 92-194 (222)
62 cd01427 HAD_like Haloacid deha 98.7 4E-08 8.7E-13 85.7 7.8 95 120-216 31-134 (139)
63 TIGR01449 PGP_bact 2-phosphogl 98.7 9.2E-08 2E-12 91.4 10.8 112 96-219 60-182 (213)
64 PRK13222 phosphoglycolate phos 98.7 2E-07 4.4E-12 89.8 12.5 111 95-219 67-190 (226)
65 PRK13223 phosphoglycolate phos 98.6 9.4E-07 2E-11 88.2 13.4 112 95-218 76-197 (272)
66 COG2937 PlsB Glycerol-3-phosph 98.5 1.5E-07 3.3E-12 100.6 7.7 173 309-481 294-522 (810)
67 KOG3120 Predicted haloacid deh 98.5 1.5E-06 3.3E-11 81.1 11.6 179 22-219 7-207 (256)
68 PRK12702 mannosyl-3-phosphogly 98.5 8.6E-07 1.9E-11 87.6 10.2 92 130-224 150-256 (302)
69 TIGR03351 PhnX-like phosphonat 98.4 5.3E-06 1.1E-10 79.8 14.2 112 95-218 60-186 (220)
70 PRK13226 phosphoglycolate phos 98.4 4.3E-06 9.3E-11 81.2 12.6 93 117-219 96-192 (229)
71 TIGR01428 HAD_type_II 2-haloal 98.4 1.1E-05 2.4E-10 76.2 15.0 89 120-222 99-193 (198)
72 PRK13288 pyrophosphatase PpaX; 98.4 6.1E-06 1.3E-10 79.1 13.2 91 117-219 83-179 (214)
73 TIGR02009 PGMB-YQAB-SF beta-ph 98.3 7.3E-06 1.6E-10 76.3 13.1 109 95-219 61-183 (185)
74 PF00702 Hydrolase: haloacid d 98.3 4.4E-06 9.5E-11 79.5 11.8 81 116-215 127-215 (215)
75 KOG3729 Mitochondrial glycerol 98.3 1.7E-06 3.7E-11 89.6 8.9 145 310-454 157-344 (715)
76 TIGR02253 CTE7 HAD superfamily 98.3 1.5E-05 3.1E-10 76.7 15.0 94 117-222 95-196 (221)
77 PRK08419 lipid A biosynthesis 98.3 3E-06 6.4E-11 85.7 10.6 163 293-481 96-278 (298)
78 PRK10725 fructose-1-P/6-phosph 98.3 1.4E-05 3.1E-10 74.6 13.7 83 121-219 95-183 (188)
79 PRK13225 phosphoglycolate phos 98.2 2E-05 4.2E-10 78.7 13.9 88 117-219 143-236 (273)
80 TIGR01422 phosphonatase phosph 98.2 2.7E-05 5.8E-10 76.7 14.7 107 97-219 75-198 (253)
81 COG0546 Gph Predicted phosphat 98.2 1.2E-05 2.6E-10 77.7 11.6 92 120-221 96-189 (220)
82 TIGR01672 AphA HAD superfamily 98.2 1.1E-05 2.4E-10 78.5 11.4 84 118-218 119-207 (237)
83 TIGR01454 AHBA_synth_RP 3-amin 98.2 1.3E-05 2.9E-10 76.2 11.7 91 117-219 76-172 (205)
84 TIGR02254 YjjG/YfnB HAD superf 98.2 5.2E-05 1.1E-09 72.8 15.3 90 116-222 97-199 (224)
85 PRK06698 bifunctional 5'-methy 98.2 1.5E-05 3.3E-10 85.5 12.7 91 116-219 330-424 (459)
86 PLN02770 haloacid dehalogenase 98.2 4.9E-05 1.1E-09 74.8 14.8 83 120-219 115-205 (248)
87 TIGR01548 HAD-SF-IA-hyp1 haloa 98.1 3E-05 6.4E-10 73.4 12.5 83 119-212 112-195 (197)
88 PLN03243 haloacid dehalogenase 98.1 4.2E-05 9.1E-10 75.8 14.0 87 117-219 110-206 (260)
89 TIGR01497 kdpB K+-transporting 98.1 5E-06 1.1E-10 92.1 8.0 97 114-231 444-544 (675)
90 TIGR01990 bPGM beta-phosphoglu 98.1 3E-05 6.5E-10 72.2 11.5 86 116-219 87-182 (185)
91 PLN02349 glycerol-3-phosphate 98.1 8.4E-06 1.8E-10 82.6 7.9 164 309-476 199-411 (426)
92 PLN02575 haloacid dehalogenase 98.1 2.4E-05 5.1E-10 81.0 11.1 87 117-219 217-313 (381)
93 PRK11587 putative phosphatase; 98.1 7.7E-05 1.7E-09 71.8 13.9 89 117-222 84-183 (218)
94 PRK13478 phosphonoacetaldehyde 98.0 0.00012 2.7E-09 72.6 15.2 107 97-219 77-200 (267)
95 KOG3730 Acyl-CoA:dihydroxyacte 98.0 7.6E-06 1.6E-10 83.7 5.6 160 291-455 132-333 (685)
96 PRK14988 GMP/IMP nucleotidase; 98.0 0.00026 5.6E-09 68.6 15.7 80 120-218 100-189 (224)
97 TIGR01670 YrbI-phosphatas 3-de 98.0 2.6E-05 5.6E-10 71.0 8.0 83 121-224 36-121 (154)
98 PHA02597 30.2 hypothetical pro 98.0 9.7E-05 2.1E-09 69.7 12.3 113 96-219 52-171 (197)
99 PRK10563 6-phosphogluconate ph 98.0 0.0001 2.2E-09 71.0 12.5 112 97-219 67-183 (221)
100 TIGR02252 DREG-2 REG-2-like, H 97.9 0.00022 4.8E-09 67.6 14.4 101 97-217 83-200 (203)
101 TIGR01509 HAD-SF-IA-v3 haloaci 97.9 9.4E-05 2E-09 68.5 11.4 88 116-218 85-180 (183)
102 PLN02940 riboflavin kinase 97.9 0.00013 2.9E-09 76.3 12.5 85 120-219 100-191 (382)
103 PRK14502 bifunctional mannosyl 97.8 0.00039 8.5E-09 76.3 14.4 51 179-229 611-666 (694)
104 PF13419 HAD_2: Haloacid dehal 97.8 0.00043 9.4E-09 62.9 12.8 101 98-218 60-173 (176)
105 COG2121 Uncharacterized protei 97.8 0.00043 9.4E-09 64.3 12.4 148 309-472 44-203 (214)
106 TIGR01993 Pyr-5-nucltdase pyri 97.8 0.0012 2.7E-08 61.5 15.7 110 95-218 64-181 (184)
107 PRK07920 lipid A biosynthesis 97.7 0.00047 1E-08 69.7 13.5 157 293-478 89-268 (298)
108 TIGR01493 HAD-SF-IA-v2 Haloaci 97.7 0.0003 6.4E-09 65.0 11.1 73 117-211 91-172 (175)
109 TIGR01511 ATPase-IB1_Cu copper 97.7 7.1E-05 1.5E-09 82.3 7.8 89 114-224 403-495 (562)
110 PRK09456 ?-D-glucose-1-phospha 97.7 0.0016 3.4E-08 61.7 15.9 87 117-218 85-181 (199)
111 PLN02779 haloacid dehalogenase 97.7 0.00089 1.9E-08 67.3 14.4 93 116-220 144-244 (286)
112 PRK10671 copA copper exporting 97.7 0.00012 2.5E-09 84.5 8.8 90 114-224 648-741 (834)
113 PRK09484 3-deoxy-D-manno-octul 97.6 0.00011 2.4E-09 68.8 6.7 83 121-224 56-141 (183)
114 COG4030 Uncharacterized protei 97.6 0.00042 9.1E-09 65.2 10.2 183 31-224 3-239 (315)
115 PRK09449 dUMP phosphatase; Pro 97.6 0.0037 8.1E-08 60.1 17.1 89 117-222 96-197 (224)
116 TIGR01549 HAD-SF-IA-v1 haloaci 97.6 0.00062 1.3E-08 61.4 10.5 80 119-215 70-154 (154)
117 TIGR02726 phenyl_P_delta pheny 97.6 0.00014 3.1E-09 67.1 6.1 90 121-231 42-135 (169)
118 COG2217 ZntA Cation transport 97.5 0.00021 4.6E-09 79.7 8.4 95 113-228 534-632 (713)
119 COG1011 Predicted hydrolase (H 97.5 0.0018 3.8E-08 62.3 13.3 93 116-223 99-201 (229)
120 PRK01122 potassium-transportin 97.5 0.00026 5.6E-09 78.8 8.3 97 114-231 443-543 (679)
121 PLN02919 haloacid dehalogenase 97.5 0.0016 3.4E-08 76.7 14.7 85 117-219 162-259 (1057)
122 TIGR01512 ATPase-IB2_Cd heavy 97.5 0.00016 3.5E-09 79.1 5.9 88 114-222 360-452 (536)
123 COG1560 HtrB Lauroyl/myristoyl 97.4 0.0016 3.4E-08 65.8 11.5 161 293-481 106-286 (308)
124 TIGR01525 ATPase-IB_hvy heavy 97.3 0.00048 1E-08 75.8 7.9 88 114-222 382-474 (556)
125 PRK14010 potassium-transportin 97.3 0.0007 1.5E-08 75.4 8.9 97 114-231 439-539 (673)
126 PRK11009 aphA acid phosphatase 97.3 0.0025 5.3E-08 62.1 11.3 82 119-219 120-208 (237)
127 PRK10748 flavin mononucleotide 97.1 0.015 3.3E-07 56.7 15.0 29 196-224 181-211 (238)
128 PF05116 S6PP: Sucrose-6F-phos 97.1 0.0051 1.1E-07 60.4 11.4 48 178-225 162-212 (247)
129 TIGR01524 ATPase-IIIB_Mg magne 97.1 0.0013 2.9E-08 75.9 8.3 111 116-231 515-638 (867)
130 PRK10976 putative hydrolase; P 97.0 0.00031 6.8E-09 69.6 2.3 54 178-231 187-243 (266)
131 COG0637 Predicted phosphatase/ 97.0 0.011 2.4E-07 57.0 12.8 94 120-223 93-187 (221)
132 PRK10513 sugar phosphate phosp 97.0 0.00032 7E-09 69.6 2.0 54 178-231 193-249 (270)
133 TIGR02247 HAD-1A3-hyp Epoxide 97.0 0.012 2.7E-07 55.9 12.9 22 197-218 171-192 (211)
134 PF03279 Lip_A_acyltrans: Bact 96.9 0.0065 1.4E-07 61.3 10.5 163 291-482 102-284 (295)
135 COG0561 Cof Predicted hydrolas 96.9 0.00051 1.1E-08 68.0 2.4 54 178-231 186-242 (264)
136 KOG0207 Cation transport ATPas 96.9 0.0079 1.7E-07 67.3 11.4 98 113-231 720-821 (951)
137 TIGR01681 HAD-SF-IIIC HAD-supe 96.8 0.0045 9.7E-08 54.4 7.6 32 119-151 35-68 (128)
138 TIGR01487 SPP-like sucrose-pho 96.8 0.0018 3.9E-08 62.0 5.3 85 134-231 113-200 (215)
139 PRK10530 pyridoxal phosphate ( 96.8 0.0031 6.8E-08 62.4 7.2 54 178-231 196-252 (272)
140 PRK15126 thiamin pyrimidine py 96.8 0.00051 1.1E-08 68.4 1.4 54 178-231 185-241 (272)
141 PRK11033 zntA zinc/cadmium/mer 96.8 0.0046 1E-07 70.3 9.2 88 114-224 566-657 (741)
142 TIGR01482 SPP-subfamily Sucros 96.7 0.0031 6.6E-08 60.6 6.5 89 132-231 111-202 (225)
143 COG1778 Low specificity phosph 96.7 0.0039 8.3E-08 55.7 6.0 90 121-231 43-136 (170)
144 PF08282 Hydrolase_3: haloacid 96.6 0.00066 1.4E-08 65.7 0.9 54 178-231 183-239 (254)
145 TIGR01116 ATPase-IIA1_Ca sarco 96.6 0.0047 1E-07 72.0 7.9 105 116-228 537-663 (917)
146 TIGR01522 ATPase-IIA2_Ca golgi 96.6 0.013 2.8E-07 68.1 11.5 101 116-221 528-643 (884)
147 PRK15122 magnesium-transportin 96.6 0.0058 1.3E-07 70.9 8.4 112 115-231 549-673 (903)
148 PRK06628 lipid A biosynthesis 96.6 0.025 5.4E-07 57.0 11.9 157 292-476 98-273 (290)
149 PRK10517 magnesium-transportin 96.6 0.0068 1.5E-07 70.3 8.7 107 120-231 557-673 (902)
150 PRK06553 lipid A biosynthesis 96.5 0.015 3.3E-07 59.0 10.3 160 292-477 115-293 (308)
151 PRK03669 mannosyl-3-phosphogly 96.5 0.0017 3.7E-08 64.7 3.2 44 178-221 184-232 (271)
152 TIGR01647 ATPase-IIIA_H plasma 96.5 0.0078 1.7E-07 68.6 8.8 108 115-229 441-568 (755)
153 TIGR01517 ATPase-IIB_Ca plasma 96.5 0.0087 1.9E-07 70.0 9.0 110 116-230 579-704 (941)
154 PLN02887 hydrolase family prot 96.5 0.0015 3.3E-08 71.5 2.5 54 178-231 504-560 (580)
155 TIGR01663 PNK-3'Pase polynucle 96.4 0.0092 2E-07 64.7 8.0 63 349-413 389-456 (526)
156 TIGR01523 ATPase-IID_K-Na pota 96.4 0.006 1.3E-07 71.8 7.1 103 115-221 645-771 (1053)
157 PRK06946 lipid A biosynthesis 96.4 0.042 9E-07 55.4 12.3 160 293-483 94-274 (293)
158 COG4087 Soluble P-type ATPase 96.3 0.018 3.8E-07 50.0 7.7 81 120-221 37-119 (152)
159 TIGR01664 DNA-3'-Pase DNA 3'-p 96.3 0.011 2.3E-07 54.5 6.9 84 119-218 48-158 (166)
160 TIGR01685 MDP-1 magnesium-depe 96.3 0.003 6.4E-08 58.6 3.1 92 120-219 52-154 (174)
161 PRK01158 phosphoglycolate phos 96.3 0.0018 3.9E-08 62.5 1.8 54 178-231 154-210 (230)
162 TIGR00099 Cof-subfamily Cof su 96.2 0.0023 5E-08 63.0 1.7 54 178-231 185-241 (256)
163 TIGR01486 HAD-SF-IIB-MPGP mann 96.1 0.0049 1.1E-07 60.8 3.8 52 178-229 173-232 (256)
164 TIGR02463 MPGP_rel mannosyl-3- 96.0 0.0051 1.1E-07 59.1 3.3 44 178-221 176-221 (221)
165 TIGR02461 osmo_MPG_phos mannos 95.9 0.0062 1.3E-07 59.0 3.3 43 179-221 179-225 (225)
166 PRK06860 lipid A biosynthesis 95.9 0.078 1.7E-06 53.9 11.3 162 292-483 108-289 (309)
167 COG2216 KdpB High-affinity K+ 95.8 0.011 2.4E-07 62.1 4.9 117 93-230 407-544 (681)
168 TIGR02471 sucr_syn_bact_C sucr 95.8 0.0045 9.9E-08 60.2 2.0 54 178-231 156-212 (236)
169 TIGR01533 lipo_e_P4 5'-nucleot 95.7 0.077 1.7E-06 52.6 10.3 74 120-209 125-202 (266)
170 TIGR02207 lipid_A_htrB lipid A 95.7 0.1 2.2E-06 52.9 11.4 163 292-484 102-284 (303)
171 TIGR01106 ATPase-IIC_X-K sodiu 95.6 0.034 7.4E-07 65.4 8.7 112 115-230 567-719 (997)
172 TIGR01494 ATPase_P-type ATPase 95.6 0.032 6.9E-07 60.7 7.9 83 115-221 346-432 (499)
173 PLN02382 probable sucrose-phos 95.6 0.0057 1.2E-07 64.7 1.8 53 178-230 172-231 (413)
174 PRK08943 lipid A biosynthesis 95.6 0.13 2.9E-06 52.3 11.7 161 292-481 113-293 (314)
175 PF05822 UMPH-1: Pyrimidine 5' 95.5 0.084 1.8E-06 51.4 9.3 144 93-244 72-234 (246)
176 TIGR02208 lipid_A_msbB lipid A 95.5 0.18 4E-06 51.1 12.4 159 293-480 105-283 (305)
177 COG3700 AphA Acid phosphatase 95.4 0.018 3.9E-07 52.5 4.2 87 113-216 114-205 (237)
178 PRK08905 lipid A biosynthesis 95.4 0.24 5.2E-06 49.8 12.6 161 293-482 84-263 (289)
179 PRK00192 mannosyl-3-phosphogly 95.3 0.017 3.7E-07 57.5 4.1 49 178-227 188-240 (273)
180 COG0474 MgtA Cation transport 95.2 0.017 3.8E-07 67.2 4.1 100 119-222 553-665 (917)
181 COG3769 Predicted hydrolase (H 95.1 0.045 9.9E-07 51.7 6.0 79 131-221 151-235 (274)
182 TIGR01691 enolase-ppase 2,3-di 95.1 0.57 1.2E-05 45.2 13.7 113 92-219 66-193 (220)
183 PF03982 DAGAT: Diacylglycerol 95.1 0.13 2.7E-06 52.0 9.5 68 343-416 110-192 (297)
184 KOG2914 Predicted haloacid-hal 95.0 0.39 8.6E-06 46.2 12.3 121 94-226 69-200 (222)
185 PRK05646 lipid A biosynthesis 95.0 0.41 8.9E-06 48.6 13.3 158 293-480 106-284 (310)
186 PTZ00174 phosphomannomutase; P 95.0 0.0068 1.5E-07 59.5 0.1 51 178-231 185-242 (247)
187 PRK08734 lipid A biosynthesis 94.9 0.54 1.2E-05 47.7 13.7 161 293-481 96-275 (305)
188 PLN02811 hydrolase 94.9 0.45 9.9E-06 45.6 12.4 25 196-220 158-182 (220)
189 PRK08733 lipid A biosynthesis 94.6 0.3 6.5E-06 49.5 11.0 159 293-483 109-286 (306)
190 TIGR01485 SPP_plant-cyano sucr 94.4 0.019 4.2E-07 56.3 1.8 53 178-230 164-220 (249)
191 PRK08706 lipid A biosynthesis 94.4 0.55 1.2E-05 47.2 12.2 159 293-481 89-268 (289)
192 smart00775 LNS2 LNS2 domain. T 94.4 0.23 5.1E-06 45.2 8.6 100 120-227 34-155 (157)
193 PRK05906 lipid A biosynthesis 94.3 0.55 1.2E-05 50.2 12.4 103 309-413 138-258 (454)
194 PRK08025 lipid A biosynthesis 94.0 0.54 1.2E-05 47.7 11.3 118 292-413 106-243 (305)
195 TIGR01484 HAD-SF-IIB HAD-super 93.9 0.043 9.4E-07 51.8 2.8 43 178-220 160-204 (204)
196 TIGR01657 P-ATPase-V P-type AT 93.6 0.16 3.4E-06 60.3 7.6 44 178-223 786-829 (1054)
197 PRK05645 lipid A biosynthesis 93.4 2.1 4.5E-05 43.1 14.2 162 293-482 95-275 (295)
198 PRK15174 Vi polysaccharide exp 92.4 1.2 2.6E-05 50.2 11.9 102 309-413 477-594 (656)
199 KOG0202 Ca2+ transporting ATPa 92.3 0.37 8.1E-06 53.9 7.4 105 120-231 591-714 (972)
200 TIGR01652 ATPase-Plipid phosph 91.1 0.9 2E-05 54.1 9.6 103 119-224 637-797 (1057)
201 PRK10187 trehalose-6-phosphate 91.0 0.49 1.1E-05 47.0 6.2 46 178-223 171-222 (266)
202 TIGR01261 hisB_Nterm histidino 90.9 1.6 3.5E-05 39.9 9.0 90 119-220 35-145 (161)
203 KOG3109 Haloacid dehalogenase- 90.2 4.5 9.7E-05 38.6 11.3 102 97-209 82-192 (244)
204 TIGR01662 HAD-SF-IIIA HAD-supe 90.2 2.1 4.6E-05 37.1 9.0 84 120-219 32-128 (132)
205 PF08645 PNK3P: Polynucleotide 90.1 0.16 3.4E-06 46.4 1.6 17 29-45 1-17 (159)
206 TIGR01675 plant-AP plant acid 88.9 3.6 7.8E-05 39.9 10.0 80 119-208 123-209 (229)
207 TIGR00213 GmhB_yaeD D,D-heptos 88.1 2.2 4.8E-05 39.3 7.9 99 119-222 32-152 (176)
208 PF11019 DUF2608: Protein of u 88.0 6.5 0.00014 38.7 11.5 86 118-209 86-192 (252)
209 PLN03190 aminophospholipid tra 87.5 1.9 4.1E-05 51.7 8.6 48 178-226 855-902 (1178)
210 KOG3085 Predicted hydrolase (H 87.2 4.2 9.1E-05 39.5 9.3 14 28-41 7-20 (237)
211 PHA02530 pseT polynucleotide k 86.9 0.88 1.9E-05 45.7 4.8 97 116-219 187-293 (300)
212 COG3176 Putative hemolysin [Ge 85.6 1.3 2.8E-05 44.2 5.0 125 284-414 58-203 (292)
213 PRK08942 D,D-heptose 1,7-bisph 85.0 4.5 9.8E-05 37.3 8.2 26 196-221 121-146 (181)
214 TIGR01689 EcbF-BcbF capsule bi 84.9 0.57 1.2E-05 41.0 1.9 15 28-42 1-15 (126)
215 PF12689 Acid_PPase: Acid Phos 84.7 0.52 1.1E-05 43.4 1.7 79 119-206 51-135 (169)
216 TIGR01684 viral_ppase viral ph 84.6 0.63 1.4E-05 46.6 2.3 34 120-154 153-187 (301)
217 PRK05446 imidazole glycerol-ph 84.3 4 8.8E-05 42.2 8.2 94 119-224 36-151 (354)
218 TIGR01656 Histidinol-ppas hist 84.2 5.1 0.00011 35.7 7.9 91 119-220 33-143 (147)
219 PLN02423 phosphomannomutase 84.0 1.4 3E-05 43.2 4.5 41 178-221 186-231 (245)
220 TIGR00685 T6PP trehalose-phosp 83.2 2.6 5.6E-05 41.1 6.1 58 160-221 150-217 (244)
221 PRK10187 trehalose-6-phosphate 83.1 1 2.2E-05 44.8 3.1 16 27-42 13-28 (266)
222 KOG4666 Predicted phosphate ac 82.9 0.0053 1.1E-07 60.7 -12.7 174 310-491 185-375 (412)
223 PLN02423 phosphomannomutase 81.9 0.85 1.9E-05 44.7 2.1 19 26-44 4-23 (245)
224 TIGR02244 HAD-IG-Ncltidse HAD 81.9 4.8 0.0001 41.5 7.5 90 120-212 191-312 (343)
225 PRK01158 phosphoglycolate phos 81.8 0.83 1.8E-05 43.8 1.9 33 124-157 31-65 (230)
226 PTZ00174 phosphomannomutase; P 81.7 0.93 2E-05 44.4 2.2 17 28-44 5-21 (247)
227 TIGR01668 YqeG_hyp_ppase HAD s 81.6 6.4 0.00014 36.1 7.7 78 120-218 50-132 (170)
228 PRK06769 hypothetical protein; 81.2 6.4 0.00014 36.2 7.5 92 119-222 34-138 (173)
229 smart00577 CPDc catalytic doma 80.9 3.6 7.7E-05 36.8 5.6 85 120-222 52-140 (148)
230 smart00775 LNS2 LNS2 domain. T 80.6 0.8 1.7E-05 41.6 1.3 14 30-43 1-14 (157)
231 KOG3128 Uncharacterized conser 80.2 2.2 4.7E-05 41.5 4.0 119 93-215 120-248 (298)
232 PRK14501 putative bifunctional 79.2 4.4 9.6E-05 46.3 6.9 45 178-222 654-701 (726)
233 TIGR01662 HAD-SF-IIIA HAD-supe 78.9 1.1 2.4E-05 39.0 1.6 14 29-42 1-14 (132)
234 PF13344 Hydrolase_6: Haloacid 76.8 1.1 2.4E-05 37.4 0.9 17 31-47 1-17 (101)
235 PHA03398 viral phosphatase sup 75.9 1.6 3.5E-05 43.7 1.9 33 120-153 155-188 (303)
236 TIGR01670 YrbI-phosphatas 3-de 75.6 1.5 3.2E-05 39.7 1.4 15 28-42 1-15 (154)
237 TIGR01656 Histidinol-ppas hist 74.9 1.8 3.9E-05 38.7 1.8 17 29-45 1-17 (147)
238 COG1778 Low specificity phosph 74.5 1.8 3.8E-05 39.1 1.6 16 28-43 8-23 (170)
239 PF08235 LNS2: LNS2 (Lipin/Ned 74.0 1.6 3.4E-05 39.7 1.2 49 179-227 100-155 (157)
240 PRK09484 3-deoxy-D-manno-octul 73.6 1.7 3.7E-05 40.5 1.3 16 27-42 20-35 (183)
241 TIGR01484 HAD-SF-IIB HAD-super 70.5 2.2 4.7E-05 40.1 1.3 29 122-151 26-55 (204)
242 PLN02580 trehalose-phosphatase 69.2 11 0.00024 39.5 6.2 60 160-222 283-352 (384)
243 TIGR02726 phenyl_P_delta pheny 67.2 3 6.4E-05 38.5 1.5 16 28-43 7-22 (169)
244 PRK10444 UMP phosphatase; Prov 66.9 2.9 6.4E-05 41.0 1.4 19 29-47 2-20 (248)
245 KOG0210 P-type ATPase [Inorgan 66.2 17 0.00037 40.5 7.0 54 176-231 764-818 (1051)
246 TIGR01459 HAD-SF-IIA-hyp4 HAD- 65.2 20 0.00043 34.8 6.9 80 120-216 31-116 (242)
247 TIGR01457 HAD-SF-IIA-hyp2 HAD- 65.1 3.3 7.1E-05 40.6 1.4 18 29-46 2-19 (249)
248 PLN02887 hydrolase family prot 65.1 3.7 8.1E-05 45.4 2.0 32 121-153 333-365 (580)
249 TIGR01458 HAD-SF-IIA-hyp3 HAD- 64.8 3.8 8.2E-05 40.4 1.8 16 29-44 2-17 (257)
250 TIGR00685 T6PP trehalose-phosp 64.1 4 8.6E-05 39.8 1.8 16 27-42 2-17 (244)
251 KOG4321 Predicted phosphate ac 63.0 8.5 0.00018 35.0 3.4 109 294-413 32-160 (279)
252 TIGR01452 PGP_euk phosphoglyco 62.5 3.8 8.2E-05 40.9 1.3 19 28-46 2-20 (279)
253 PLN02645 phosphoglycolate phos 62.3 4 8.6E-05 41.5 1.5 19 27-45 27-45 (311)
254 PF03031 NIF: NLI interacting 62.1 4.3 9.3E-05 36.5 1.5 22 130-152 53-74 (159)
255 TIGR01456 CECR5 HAD-superfamil 60.6 5 0.00011 40.9 1.8 17 30-46 2-18 (321)
256 COG0561 Cof Predicted hydrolas 59.8 35 0.00077 33.3 7.7 65 121-192 28-97 (264)
257 TIGR01261 hisB_Nterm histidino 58.2 6.6 0.00014 35.8 2.0 17 28-44 1-17 (161)
258 PRK08942 D,D-heptose 1,7-bisph 57.3 6.1 0.00013 36.5 1.6 15 28-42 3-17 (181)
259 COG0647 NagD Predicted sugar p 57.1 5.5 0.00012 39.6 1.4 23 27-49 7-29 (269)
260 COG2179 Predicted hydrolase of 57.0 43 0.00093 30.8 6.9 76 115-209 45-125 (175)
261 TIGR02471 sucr_syn_bact_C sucr 56.8 4.6 0.0001 39.0 0.8 12 30-41 1-12 (236)
262 COG1877 OtsB Trehalose-6-phosp 56.6 6.2 0.00013 39.1 1.6 61 160-224 165-229 (266)
263 COG5083 SMP2 Uncharacterized p 56.1 6.2 0.00013 41.3 1.6 18 27-44 374-391 (580)
264 PRK10513 sugar phosphate phosp 55.5 31 0.00067 33.8 6.5 32 121-153 28-60 (270)
265 TIGR00213 GmhB_yaeD D,D-heptos 55.3 6.5 0.00014 36.1 1.5 14 29-42 2-15 (176)
266 TIGR01460 HAD-SF-IIA Haloacid 54.5 5.2 0.00011 38.8 0.7 16 31-46 1-16 (236)
267 PRK10530 pyridoxal phosphate ( 54.1 44 0.00095 32.6 7.3 69 121-192 28-99 (272)
268 TIGR01487 SPP-like sucrose-pho 53.7 19 0.00042 34.0 4.5 37 120-157 25-63 (215)
269 PF05761 5_nucleotid: 5' nucle 52.5 41 0.00089 36.1 7.1 88 120-209 190-310 (448)
270 PLN03017 trehalose-phosphatase 52.4 8.3 0.00018 40.0 1.8 15 27-41 110-124 (366)
271 TIGR02463 MPGP_rel mannosyl-3- 51.1 27 0.00059 33.1 5.1 31 122-153 25-56 (221)
272 TIGR01686 FkbH FkbH-like domai 50.9 44 0.00096 33.9 6.9 84 119-218 37-126 (320)
273 PF08235 LNS2: LNS2 (Lipin/Ned 50.8 55 0.0012 29.8 6.6 15 30-44 1-15 (157)
274 PLN02580 trehalose-phosphatase 50.7 9 0.0002 40.1 1.8 15 27-41 118-132 (384)
275 COG4996 Predicted phosphatase 50.5 8.4 0.00018 33.8 1.2 16 29-44 1-16 (164)
276 PLN02151 trehalose-phosphatase 49.9 9.6 0.00021 39.4 1.8 59 160-221 251-319 (354)
277 TIGR01686 FkbH FkbH-like domai 47.4 11 0.00024 38.3 1.9 17 27-43 2-18 (320)
278 PLN02205 alpha,alpha-trehalose 46.9 39 0.00084 39.4 6.3 38 178-215 759-801 (854)
279 PRK10976 putative hydrolase; P 46.4 78 0.0017 30.8 7.7 67 121-191 27-96 (266)
280 TIGR01485 SPP_plant-cyano sucr 46.2 12 0.00026 36.4 1.8 26 126-152 34-60 (249)
281 TIGR01684 viral_ppase viral ph 45.9 42 0.0009 33.8 5.5 20 23-42 121-140 (301)
282 PF05152 DUF705: Protein of un 45.8 15 0.00032 36.6 2.3 19 25-43 119-137 (297)
283 TIGR02245 HAD_IIID1 HAD-superf 45.5 17 0.00038 34.3 2.7 22 130-152 62-83 (195)
284 PLN02205 alpha,alpha-trehalose 45.5 12 0.00026 43.4 1.9 17 27-43 595-611 (854)
285 TIGR02250 FCP1_euk FCP1-like p 45.1 15 0.00033 33.2 2.2 39 120-160 65-105 (156)
286 TIGR02251 HIF-SF_euk Dullard-l 44.8 37 0.00081 30.8 4.7 33 120-153 49-81 (162)
287 KOG3189 Phosphomannomutase [Li 43.8 13 0.00028 35.0 1.5 17 28-44 11-27 (252)
288 TIGR00099 Cof-subfamily Cof su 43.8 39 0.00084 32.8 5.0 68 121-192 24-94 (256)
289 PRK03669 mannosyl-3-phosphogly 43.7 35 0.00076 33.6 4.7 32 121-153 32-64 (271)
290 TIGR02251 HIF-SF_euk Dullard-l 42.7 15 0.00033 33.4 1.8 16 29-44 2-17 (162)
291 PHA03398 viral phosphatase sup 42.5 46 0.001 33.6 5.2 17 26-42 126-142 (303)
292 PRK14501 putative bifunctional 42.1 14 0.0003 42.3 1.8 17 26-42 490-506 (726)
293 KOG0206 P-type ATPase [General 41.2 23 0.00049 42.2 3.3 49 181-230 781-829 (1151)
294 smart00577 CPDc catalytic doma 40.4 18 0.00039 32.2 1.9 16 28-43 2-17 (148)
295 PF09949 DUF2183: Uncharacteri 40.2 52 0.0011 27.5 4.5 73 133-212 4-82 (100)
296 PF09419 PGP_phosphatase: Mito 39.7 21 0.00045 32.9 2.2 20 25-44 38-57 (168)
297 PRK15126 thiamin pyrimidine py 36.2 58 0.0013 31.9 5.0 36 121-157 27-64 (272)
298 KOG2134 Polynucleotide kinase 35.6 26 0.00056 36.4 2.3 98 311-414 250-357 (422)
299 PF03767 Acid_phosphat_B: HAD 35.1 22 0.00048 34.4 1.7 82 120-210 122-207 (229)
300 PF04028 DUF374: Domain of unk 34.7 57 0.0012 25.6 3.6 25 363-387 46-71 (74)
301 KOG0203 Na+/K+ ATPase, alpha s 34.3 49 0.0011 37.9 4.3 125 117-246 594-764 (1019)
302 PF02358 Trehalose_PPase: Treh 33.8 19 0.00042 34.7 1.0 38 179-216 163-205 (235)
303 TIGR01459 HAD-SF-IIA-hyp4 HAD- 32.9 24 0.00053 34.1 1.6 21 27-47 7-27 (242)
304 PRK00192 mannosyl-3-phosphogly 32.6 69 0.0015 31.5 4.8 32 121-153 29-61 (273)
305 TIGR01482 SPP-subfamily Sucros 32.6 76 0.0016 29.9 5.0 34 123-157 25-60 (225)
306 TIGR02461 osmo_MPG_phos mannos 32.1 82 0.0018 30.2 5.1 36 121-157 23-60 (225)
307 TIGR01486 HAD-SF-IIB-MPGP mann 31.8 78 0.0017 30.8 5.0 37 122-159 25-63 (256)
308 KOG1618 Predicted phosphatase 30.7 70 0.0015 32.5 4.3 23 25-47 32-54 (389)
309 PLN02382 probable sucrose-phos 29.9 36 0.00078 36.1 2.4 17 27-43 8-24 (413)
310 TIGR01668 YqeG_hyp_ppase HAD s 29.4 34 0.00073 31.3 1.8 19 26-44 23-41 (170)
311 PF08282 Hydrolase_3: haloacid 28.8 91 0.002 29.3 4.9 38 121-159 23-62 (254)
312 KOG0204 Calcium transporting A 28.1 84 0.0018 36.2 4.8 103 114-222 645-765 (1034)
313 PF04007 DUF354: Protein of un 27.8 64 0.0014 33.2 3.7 37 117-154 15-51 (335)
314 COG0241 HisB Histidinol phosph 27.8 2.1E+02 0.0045 26.7 6.7 38 180-217 105-144 (181)
315 PF15202 Adipogenin: Adipogeni 27.8 77 0.0017 24.3 3.1 24 249-272 11-34 (81)
316 PRK05446 imidazole glycerol-ph 27.2 41 0.00088 34.9 2.1 17 28-44 2-18 (354)
317 COG3882 FkbH Predicted enzyme 26.5 39 0.00085 36.2 1.8 80 124-216 266-348 (574)
318 COG3769 Predicted hydrolase (H 26.5 43 0.00093 32.2 1.9 38 199-244 120-158 (274)
319 PLN03064 alpha,alpha-trehalose 26.5 37 0.00079 39.8 1.8 53 159-215 750-811 (934)
320 PF06941 NT5C: 5' nucleotidase 25.8 40 0.00086 31.3 1.6 14 29-42 2-16 (191)
321 KOG3360 Acylphosphatase [Energ 25.6 1.8E+02 0.0038 24.1 5.0 47 138-193 23-69 (98)
322 PLN03063 alpha,alpha-trehalose 25.1 40 0.00087 39.0 1.8 54 159-216 660-722 (797)
323 PRK12702 mannosyl-3-phosphogly 25.0 1.4E+02 0.003 30.2 5.4 32 121-153 26-58 (302)
324 PRK04974 glycerol-3-phosphate 23.9 3.9E+02 0.0085 31.1 9.3 24 309-332 37-60 (818)
325 TIGR02250 FCP1_euk FCP1-like p 23.8 1.3E+02 0.0029 27.1 4.6 19 26-44 4-22 (156)
326 COG2179 Predicted hydrolase of 23.5 50 0.0011 30.3 1.7 19 26-44 26-44 (175)
327 TIGR01680 Veg_Stor_Prot vegeta 22.7 48 0.001 33.0 1.6 15 27-41 100-114 (275)
328 PF00875 DNA_photolyase: DNA p 21.6 1.7E+02 0.0037 26.2 5.0 55 123-192 60-115 (165)
329 PF08621 RPAP1_N: RPAP1-like, 20.8 1.8E+02 0.0038 20.9 3.8 35 90-129 9-43 (49)
330 PF02358 Trehalose_PPase: Treh 20.5 95 0.0021 29.8 3.2 13 32-44 1-13 (235)
No 1
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=7.6e-94 Score=757.64 Aligned_cols=492 Identities=59% Similarity=1.063 Sum_probs=445.6
Q ss_pred CCCCCCCCCccccccCCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHH
Q 042288 9 YGDSFNFPTIDKCASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVL 88 (515)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 88 (515)
.|-|-.||+|++|+.+.++..+++|||||||++++|+|.+|++++.+.+++.+.+..+..+|.+...+....++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l 82 (497)
T PLN02177 3 MGASRRFEPISKCSSEGRSNQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTF 82 (497)
T ss_pred ccccCCCCccccCCcccccccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHH
Confidence 36788899999999999999999999999999999999999988887778888887777677776654334455557788
Q ss_pred HHHHHcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEE-eCcee
Q 042288 89 IFATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICV-YKGRS 167 (515)
Q Consensus 89 ~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~-~~G~~ 167 (515)
+...|+|++++++++++++|+++++...++++++++++++|+++|||||++.+|+||++++||+|+|+||++++ .||++
T Consensus 83 ~~~~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~~~~g~~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~ 162 (497)
T PLN02177 83 VFIAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVFNSFGKRYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRA 162 (497)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhCCCEEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEE
Confidence 88899999999999999999999888889999999999999889999999999999998668999999999999 59999
Q ss_pred eeEEecCC-ccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceEEccCccc
Q 042288 168 TGFVKSPG-VLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIVFHDGRLV 246 (515)
Q Consensus 168 tG~i~~~~-~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~~ 246 (515)
||++.|+| | +|++|++++++.++. ....+|||||.+|+|||++|+++++||+++ ++.+.+++.--|++|||||++
T Consensus 163 TG~i~g~~~c-~Ge~Kv~rl~~~~g~--~~~~~aYgDS~sD~plL~~a~e~y~V~~~~-~~~~~~~~~~~~~~fhdgrl~ 238 (497)
T PLN02177 163 TGFMKKPGVL-VGDHKRDAVLKEFGD--ALPDLGLGDRETDHDFMSICKEGYMVPRTK-CEPLPRNKLLSPVIFHEGRLV 238 (497)
T ss_pred eeeecCCCCC-ccHHHHHHHHHHhCC--CCceEEEECCccHHHHHHhCCccEEeCCCC-CCcCCcccCCCceeeeCCccc
Confidence 99999985 6 999999999988774 234599999999999999999999999966 999998667778999999999
Q ss_pred CCcchhhHHHHhhhHHHHHHHHHHHHHhhccccHHHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHH
Q 042288 247 QKPTPFMALLTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPI 326 (515)
Q Consensus 247 ~~p~~~~~l~~~l~~p~~l~~~~~r~~~~~~~~~~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~ 326 (515)
++|++.++|++++|+|+|++++++|+++++.+|.+|++.+++++|++++|+|.+|+|.. ..++|+|+||||+|++|++
T Consensus 239 ~~p~~~~~l~~~~~~p~g~~l~~~r~~~~~~lp~~~~~~~~~~~Gv~v~v~G~e~~p~~--~~~~~~l~v~NHqS~lD~~ 316 (497)
T PLN02177 239 QRPTPLVALLTFLWMPIGFILSLLRVYLNIPLPERIARYNYKLLGIRLIVKGNPPPPPK--KGQPGVLFVCNHRTVLDPV 316 (497)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCcEEEEEcCCCCCcc--cCCCCeEEEECCCCcchHH
Confidence 99999999999999999999999999999999999999999999999999999998721 0147999999999999999
Q ss_pred HHHHhcCCCccEEEecccchhhhhhcCCeeEEecCChhhHHHHHHHHHcCCeEEecCCeeeCCCccccccchhhccCCcE
Q 042288 327 FLSTALGRPIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEV 406 (515)
Q Consensus 327 ~l~~~~~~~~~~v~k~~~~~g~~~~~~~~i~idR~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pV 406 (515)
++...+++++.++++++..++++++.++++++||++.++..++++.+++|+++|||||||++++.+++||+||+++.+||
T Consensus 317 ~l~~al~~~~~~v~~~~~~l~~~l~~i~~~~ldR~r~~~~~~~~~lL~~g~lvIFPEGTrs~~~~l~~Fk~~fa~l~~pI 396 (497)
T PLN02177 317 VTAVALGRKISCVTYSISKFSELISPIKAVALSREREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRI 396 (497)
T ss_pred HHHHHcCCCeEEEeehHHHHHHHHHhcCEEEEeCCChHHHHHHHHHHhcCCEEECcCcCCCCCCCcchHHHHHHHHCCcE
Confidence 99999998889999887778999999999999999877767788889999999999999999999999999998888999
Q ss_pred EEEEEEcCccCccCcccCCCccCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCH
Q 042288 407 VPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTR 486 (515)
Q Consensus 407 vPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~ 486 (515)
|||+|.++..++.+++..+|+++|++|++++|.+.++|+||+|+++++.+..+++..|+|++||+.|++.|++++|.+|+
T Consensus 397 VPVAI~~~~~~f~~~t~~~~~~~d~~~~~~~p~~~y~V~fL~~l~~~~~~~~~~~~~evAn~Vq~~i~~~lg~~~t~~tr 476 (497)
T PLN02177 397 VPVAINTKQSMFHGTTVRGYKLLDPYFVFMNPRPTYEITFLNQLPKELTCKGGKSPIEVANYIQRVLAGTLGFECTNLTR 476 (497)
T ss_pred EEEEEEcccccccccccccceecchhhhhcCCCceEEEEECCCCChhhcccCCCCHHHHHHHHHHHHHHhhCceeccccH
Confidence 99999998888898888999999999999999999999999999998654468999999999999999999999999999
Q ss_pred HHHHHHHccCCCccccchhh
Q 042288 487 KDKYRALAGNDGTVVEKPAK 506 (515)
Q Consensus 487 ~d~~~~~~~~~~~~~~~~~~ 506 (515)
+|||+.||||||+|..++-|
T Consensus 477 ~dk~~~l~gn~g~v~~~~~~ 496 (497)
T PLN02177 477 KDKYAILAGTDGRVPSKKEK 496 (497)
T ss_pred HHHHHHhcCCCccccCCCCC
Confidence 99999999999999877643
No 2
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=3.4e-86 Score=682.17 Aligned_cols=486 Identities=55% Similarity=0.947 Sum_probs=441.1
Q ss_pred CCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHH
Q 042288 24 IGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIES 103 (515)
Q Consensus 24 ~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~ 103 (515)
+++++..++|||||||+.+.|+|++|++.+.+.++..+.+.++..+|.+++++.....+.++|.++...|+|++++++++
T Consensus 4 ~~~~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~~LL~l~P~l~ll~~~~~~~~~lK~mi~v~f~Gl~~~die~ 83 (498)
T PLN02499 4 SGTTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMGDAALKLMIFVATAGVHESEIES 83 (498)
T ss_pred CCcccceEEEecccceecCCCccHHHHHHHHHhccHHHHHHHHHHhHHHHHHHhcCCchHHHHHHHHHHhCCCCHHHHHH
Confidence 45677889999999999988889999987778788888888888899998875433344558889999999999999999
Q ss_pred HHHHHhchhhcCCCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeC-ceeeeEEecCCccccccH
Q 042288 104 VARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNK 182 (515)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~-G~~tG~i~~~~~~~g~~K 182 (515)
.++.++++++.+.+++++++.+++.|+++||||||+.+||||+++|||+|.|+||++++.+ |++||.+.|.|| ++.|
T Consensus 84 vaRavlpkf~~~dv~~e~~~~~~~~g~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~G~n~--~ek~ 161 (498)
T PLN02499 84 VARAVLPKFYMDDVDMEAWKVFSSCDKRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIRGTDV--DQSV 161 (498)
T ss_pred HHHHHhhHHHHhhCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEecCcc--HHHH
Confidence 9999999999999999999999998888999999999999999999999999999999985 999999999887 6666
Q ss_pred HHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCC--CCCCcccccCCCCceEEccCcccCCcchhhHHHHhhh
Q 042288 183 AGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPN--PKVDPVSQDKLPKPIVFHDGRLVQKPTPFMALLTILW 260 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~--~~l~~~A~~~~~W~i~f~~~r~~~~p~~~~~l~~~l~ 260 (515)
++++++.++. ..+++++||+.+|.+++..|+.-++++.. +.++.+.++++--|++|||||++++|++.++|++++|
T Consensus 162 ~~rl~~~~g~--~~~~vg~~~~~~~~~f~~~ck~~~~~~~~~~~~~~~~~~~~~~~p~ifhdgrl~~~ptp~~~l~~~~w 239 (498)
T PLN02499 162 ANRVANLFVD--ERPQLGLGRISASSSFLSLCKEQIHPPFPANYNGDNQQQLVRPLPVIFHDGRLVKRPTPATALLILLW 239 (498)
T ss_pred HHHHHHHhCc--cCceecccCCcccchhhhhCceEEecCcccccccccCccccCCCCeEEeCCcccCCCCHHHHHHHHHH
Confidence 9999999886 46789999999999999999977776643 3455555544445889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccHHHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEE
Q 042288 261 IPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVT 340 (515)
Q Consensus 261 ~p~~l~~~~~r~~~~~~~~~~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~ 340 (515)
+|+|++++++|++.+..+|.|....+..++|++++|+|.||+|.. ..++|+|+||||+|++|++++..++++++.+++
T Consensus 240 ~P~g~~l~~~R~~~~~~lp~~~~~~~~~~~G~~v~V~G~e~~P~~--~~~~gvL~v~NH~S~lDp~~l~~al~R~v~~va 317 (498)
T PLN02499 240 IPLGIILAVIRIFVGIMLPMWAIPYVSRIFGGKVIVKGKPPPPAS--GGNSGVLFVCTHRTLMDPVVLSTVLGRSIPAVT 317 (498)
T ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHHHHhcCceEEEEcCCCCCCc--CCCCCEEEEeCCCCcccHHHHHHHcCCceeehH
Confidence 999999999999999999999888899999999999999999831 012699999999999999999999999999999
Q ss_pred ecccchhhhhhcCCeeEEecCChhhHHHHHHHHHcCCeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcCccCccC
Q 042288 341 YSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHG 420 (515)
Q Consensus 341 k~~~~~g~~~~~~~~i~idR~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~~~~ 420 (515)
+.++.++++++.+++++++|++..+.+++++.|++|.++|||||||++++.|++|++|++++.+|||||+|....+++++
T Consensus 318 y~~~~ls~ll~~i~avrv~R~r~~d~~air~lL~~G~lvIFPEGTrsreg~LlrFk~l~aela~pVVPVAI~~~~~~f~g 397 (498)
T PLN02499 318 YSISRLSEILSPIPTVRLTRIRDVDAEKIKRELARGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHA 397 (498)
T ss_pred hhHHHHHHHhcccCeeeecCCchhHHHHHHHHhhCCCEEEcCCCCCCCCCcccccchhhhhhcCceEeEEEEeccceEEE
Confidence 88899999999999999999987777889999999999999999999999999999999998899999999999999999
Q ss_pred cccCCCccCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHccCCCcc
Q 042288 421 TTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGNDGTV 500 (515)
Q Consensus 421 ~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~~~~~~~~~~ 500 (515)
++++||+++|++|++++|.+.++|+||++++.+..++.+++..|+|+.||+.|+++||+++|++|++|||++||||||+|
T Consensus 398 tta~g~k~~Dp~~f~mnP~p~y~v~fL~~~~~~~t~~~g~s~~evan~vQ~~la~~LgfecT~lTrkdKy~~lagndg~v 477 (498)
T PLN02499 398 TTARGWKGLDPIFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 477 (498)
T ss_pred EcCCCCchhhhhhheecCCceEEEEEcCCCChhhccCCCCChHHHHHHHHHHHHHHhCCccccccHHHHHHHhcCCCccc
Confidence 99899999999999999999999999999999877666899999999999999999999999999999999999999999
Q ss_pred ccchhhhhhccccCC
Q 042288 501 VEKPAKLAANKIMGC 515 (515)
Q Consensus 501 ~~~~~~~~~~~~~~~ 515 (515)
..++-+-.++|+|||
T Consensus 478 ~~~~~~~~~~~~~~~ 492 (498)
T PLN02499 478 SYLSFLDQLKKVVST 492 (498)
T ss_pred cCccchhHHHhhhhc
Confidence 999988888999998
No 3
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=1.1e-75 Score=601.25 Aligned_cols=465 Identities=42% Similarity=0.767 Sum_probs=412.7
Q ss_pred CCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHH
Q 042288 24 IGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIES 103 (515)
Q Consensus 24 ~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~ 103 (515)
+..+...+++|+||||+.+.|+|++|+..+++.++++|.+.++..+|.+++. +++.+++.++...|.|+.+++++
T Consensus 46 ~~~~~~t~v~d~~g~Ll~s~s~FpyfmlvA~Eag~~lR~l~Ll~~~P~~~~~----~~~~~~~~m~~v~f~Gl~~~~~~- 120 (525)
T PLN02588 46 QDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLFVLYPFISLM----SYEMGLKTMVMLSFFGVKKESFR- 120 (525)
T ss_pred cccccceEEEecccceeccCCCCcceeeeeeccccHHHHHHHHHHhHHHHHh----ccchhhHHhHHHhhcCCcHHHhh-
Confidence 4556778999999999999999999999889999999999999999999864 35566888889999999999888
Q ss_pred HHHHHhchhhcCCCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHH
Q 042288 104 VARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKA 183 (515)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~ 183 (515)
+++..+++++.+.+.+|+++..+.-|++++||+.|..+||+++++|||+|.|+|||+++..|++||.+.+. .|.
T Consensus 121 v~ravLPkf~~~dv~~e~~~v~~~~~~~~vv~~~PrvMve~Flkeyl~~d~V~g~El~~~~g~~tG~~~~~------~~~ 194 (525)
T PLN02588 121 AGKAVLPKYFLEDVGLEMFQVLKRGGKRVGVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIMEDK------KKH 194 (525)
T ss_pred hHHhhccHHHHhhcCHHHHHHHhhcCcEEEEecCCHHHHHHHHHHhcCcceEeeeeEEEeeeEEEEEEccc------chH
Confidence 99999999999999999999887777889999999999999999999999999999999999999999753 344
Q ss_pred HHHHH-HhcCC--CCCceEEEeCC---cCcHHHHhccccceeeCCCCC--CCcccccCCCCceEEccCcccCCcchhhHH
Q 042288 184 GALMK-MLGDD--EEMPDIGLGDR---KTDSLFLNLCKESYMVPPNPK--VDPVSQDKLPKPIVFHDGRLVQKPTPFMAL 255 (515)
Q Consensus 184 ~~l~~-~~~~~--~~~~~~aygDS---~~DlpmL~~a~~~~~Vnp~~~--l~~~A~~~~~W~i~f~~~r~~~~p~~~~~l 255 (515)
....+ .++.. +.+.++++||+ .+|.+....|++.++|+++++ ++.+.+++.--|++|||||++++|++.++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~f~~~CkE~y~v~~~~~~~~~~~p~~~~~~pliFHDGRL~~rPtp~~~l 274 (525)
T PLN02588 195 ELAFDKVVQEERLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPRDQYPKPLIFHDGRLAIKPTPLNTL 274 (525)
T ss_pred HHHHHHHhcccCcccccceeecccCcccccchhHHhCcceEEeChhhccccccCCcccCCCceeEeCCcccCCCChHHHH
Confidence 44443 45442 11238899998 899999999999999999776 888888667778999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHhhccccHHHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcC-C
Q 042288 256 LTILWIPVGFLLACLRMAAGALLPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALG-R 334 (515)
Q Consensus 256 ~~~l~~p~~l~~~~~r~~~~~~~~~~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~-~ 334 (515)
++++|+|+|++++++|+++++.+|.+++..++.++|++++++|....+. ..++|+|+||||+|++|++++...++ +
T Consensus 275 ~~~~wlP~g~~La~~R~~~~~~lP~~~~~~~~~~~Gvrl~v~g~~p~~~---~~~~gvI~V~NH~S~LDPi~L~~Al~rr 351 (525)
T PLN02588 275 VLFMWAPFAAALAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNDLISS---DRKKGCLFVCNHRTLLDPLYISYALRKK 351 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHcCcEEEEEeCCCCCC---CCCCCEEEEECCcchhhHHHHHHHcccC
Confidence 9999999999999999999999999999999999999999996543321 03579999999999999999999886 5
Q ss_pred CccEEEecccchhhhhhcCCeeEEecCChhhHHHHHHHHHcCCeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcC
Q 042288 335 PIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEKLLEKGDLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNR 414 (515)
Q Consensus 335 ~~~~v~k~~~~~g~~~~~~~~i~idR~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~ 414 (515)
++.++.+++++++++++.+++++|||++.++.+++++.+++|.++|||||||++++.|++||+|++++..|||||+|+++
T Consensus 352 ~I~~mtFsip~lg~lL~~i~ti~VdRdr~~D~~aI~~LLk~GdlVIFPEGTRsr~g~LlrFk~l~A~la~~IVPVAI~~~ 431 (525)
T PLN02588 352 NIKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSH 431 (525)
T ss_pred cceEEEEEhHHHHHHHHhcCceeecCCCcchHHHHHHHHhCCCEEEccCccccCCCcccChhhhHHHhcCceeeEEEEEe
Confidence 58888888999999999999999999987777888888999988999999999999999999998877899999999999
Q ss_pred ccCccCcccCCCccCCccccccCCCCeEEEEEeccccC--ccccC---CCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 042288 415 MSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPY--ELTCS---AGKSSHDVANYIQRLIATSLSYECTSFTRKDK 489 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~--~~~~~---~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~ 489 (515)
..++.++++.||+++|++|++++|.+.++|+|||+++. +..++ .+++..|+|++||..|++.||+++|.+|++||
T Consensus 432 ~~~f~gtt~~g~k~~D~~~fl~nP~p~y~V~fL~~v~~~~e~~~~~p~~g~s~~evAn~VQ~~iA~~LG~e~T~~Tr~dk 511 (525)
T PLN02588 432 VTFFYGTTASGLKAFDPIFFLLNPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGNALGFECTNLTRRDK 511 (525)
T ss_pred ccccceeecCCCcccceeEEEecCCceEEEEEcCcCCchhhhcccCcccCCChHHHHHHHHHHHHHhhCceecccchhhh
Confidence 88999988899999999999999999999999999986 32333 26888999999999999999999999999999
Q ss_pred HHHHccCCCcccc
Q 042288 490 YRALAGNDGTVVE 502 (515)
Q Consensus 490 ~~~~~~~~~~~~~ 502 (515)
|+.||||||+|+.
T Consensus 512 Y~~LaGndG~v~~ 524 (525)
T PLN02588 512 YLILAGNNGVVKK 524 (525)
T ss_pred hheecCCCcccCC
Confidence 9999999999853
No 4
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=8e-36 Score=279.25 Aligned_cols=182 Identities=16% Similarity=0.225 Sum_probs=153.5
Q ss_pred ccHHHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcC
Q 042288 278 LPMPLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPI 353 (515)
Q Consensus 278 ~~~~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~ 353 (515)
...+|...+.+.+|+|++++|.|+++ +++|+|+||||||.||++.|+..+|..+..++|+ +|++||.+.+.
T Consensus 61 ~a~~~~~~~~y~~g~r~ev~g~E~L~-----~~~p~ViVsNHQS~LDil~m~~i~p~~cvviaKr~L~yvp~~gl~m~L~ 135 (276)
T KOG2848|consen 61 IAKLWFHSMKYLLGLRFEVRGEENLP-----KSKPAVIVSNHQSSLDILGMGSIWPKNCVVIAKRSLFYVPIFGLAMYLS 135 (276)
T ss_pred HHHHHHHHHhhhcceEEEEechhhCC-----ccCCeEEEecchhHHHHHHHHhhcCCceEEEEeeeeeecchHHHHHHHc
Confidence 33457777888999999999999999 6789999999999999999999999999999998 79999999999
Q ss_pred CeeEEecCChhh----HHHHHHHHHcC--CeEEecCCeeeCCCccccccch-h---hccCCcEEEEEEEcCccCccCccc
Q 042288 354 KTVRLTRDRATD----ASMIEKLLEKG--DLVICPEGTTCREPFLLRFSAL-F---AELTDEVVPVAMSNRMSMFHGTTA 423 (515)
Q Consensus 354 ~~i~idR~~~~~----~~~~~~~l~~G--~l~IFPEGTrs~~~~l~~Fk~G-f---~~~~~pVvPV~i~~~~~~~~~~~~ 423 (515)
|++||||.++++ ++++.+.++++ ++++||||||+.++.|+|||+| | .++++||+||+++.+........
T Consensus 136 gvvfIdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn~~g~llPFKKGAF~lAvqaqVPIVPvv~ssy~~f~~~~~- 214 (276)
T KOG2848|consen 136 GVVFIDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTRNKEGRLLPFKKGAFHLAVQAQVPIVPVVFSSYGDFYSTKE- 214 (276)
T ss_pred CceEEecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccCCCCcccccccceeeeehhcCCCEEEEEEecccccccCcc-
Confidence 999999998866 56667777766 8999999999999999999999 5 78899999999999654332111
Q ss_pred CCCccCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcC
Q 042288 424 RGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLS 478 (515)
Q Consensus 424 ~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~ 478 (515)
..++.|. +.|++||||+++.. ...+..++++++|+.|.+.+.
T Consensus 215 ----------k~f~sG~-v~V~vL~pI~Tegl--T~ddv~~L~~~~R~~M~~~~~ 256 (276)
T KOG2848|consen 215 ----------KVFNSGN-VIVRVLPPIPTEGL--TKDDVDVLSDECRSAMLETFK 256 (276)
T ss_pred ----------ceeecce-EEEEEcCCCCccCC--CcccHHHHHHHHHHHHHHHHH
Confidence 3456677 99999999999832 134456899999999998654
No 5
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=100.00 E-value=4.5e-34 Score=273.26 Aligned_cols=193 Identities=20% Similarity=0.284 Sum_probs=148.2
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcc----cCcccHHHHHHHHHHHcCCCHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYY----YVSESAGIRVLIFATFAGMKVPSIE 102 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----l~~~~~~~~~~~~~~~~G~~~~~l~ 102 (515)
+.++|+|||||||+++||...|+.+. .+ +.....+..++..+ .+.++. ...+. .++.+++.+++|+++++++
T Consensus 4 ~~~la~FDfDgTLt~~ds~~~fl~~~-~~-~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~g~~~~~l~ 79 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDMFGSFLRFL-LR-HLPLNALLVIPLLP-IIAIALLIGGRAARW-PMSLLLWACTFGHREAHLQ 79 (210)
T ss_pred cCcEEEEcCCCCCccCccHHHHHHHH-HH-HhHHHHHHHHHHHH-HHHHhhcccccccch-hhHHHHHHHHcCCCHHHHH
Confidence 67999999999999999977676543 32 11112222111111 111211 11222 2456778899999999999
Q ss_pred HHHHHHhchhhcC-CCcHHHHHHH----HhCC-CEEEEecCcHHHHHHHHHhhcCC---cEEEeceEEEeCceeeeEEec
Q 042288 103 SVARAVLPKFYSG-DLHPETWRVF----SSCG-RRCVLTANPRIMVEAFLKDFLGA---DMVIGTEICVYKGRSTGFVKS 173 (515)
Q Consensus 103 ~~~~~~~~~~~~~-~~~~~~~~~l----~~~G-~~vivSaS~~~~v~~ia~~~lGi---d~vigt~l~~~~G~~tG~i~~ 173 (515)
+++++|.+.+... .++|.+.+.+ +++| .++|||||++.+++++++. +|+ +++|||++++++| |++.|
T Consensus 80 ~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~~~~i~t~le~~~g---g~~~g 155 (210)
T TIGR01545 80 DLEADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHRLNLIASQIERGNG---GWVLP 155 (210)
T ss_pred HHHHHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccccccCcEEEEEeEEeCC---ceEcC
Confidence 9999998776554 5788888855 2479 5577999999999999986 554 8999999999877 88999
Q ss_pred CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcc
Q 042288 174 PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPV 229 (515)
Q Consensus 174 ~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~ 229 (515)
+|| +|++|+++|+++++. +...++|||||.||+|||+.|++|++||||++|+++
T Consensus 156 ~~c-~g~~Kv~rl~~~~~~-~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~~ 209 (210)
T TIGR01545 156 LRC-LGHEKVAQLEQKIGS-PLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQL 209 (210)
T ss_pred ccC-CChHHHHHHHHHhCC-ChhheEEecCCcccHHHHHhCCCcEEECcchHhccc
Confidence 999 999999999999974 234578999999999999999999999999999975
No 6
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.
Probab=100.00 E-value=1.6e-33 Score=270.27 Aligned_cols=196 Identities=22% Similarity=0.327 Sum_probs=157.2
Q ss_pred HHHhHh-cceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEE
Q 042288 284 YYAFWA-LGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRL 358 (515)
Q Consensus 284 ~~l~~~-~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~i 358 (515)
|.++++ .|++++++|.+++| ++|+|+||||+|++|++++.+. .+..+++|+ +|++|+++...|+++|
T Consensus 2 r~~~~~~~~~~~~v~g~~~~p------~~~~iiv~NH~S~~D~~~l~~~--~~~~fv~k~el~~~p~~g~~~~~~g~i~v 73 (211)
T cd07991 2 RVLLFAFGFYVIKVHGKPDPP------EAPRIIVANHTSFIDPLILFSD--LFPSIVAKKELGKLPFIGTILRALGCIFV 73 (211)
T ss_pred eEEEEEEEEEEEEEECCCCCC------CCCeEEEECCCcHHHHHHHhhh--cCcEEEEehhhccCcHHHHHHHhCCceEE
Confidence 344555 67999999999996 5799999999999999999987 466889987 7999999999999999
Q ss_pred ecCChhh----HHHHHHHHH--cC-CeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcCccC-ccCcccCCCcc-C
Q 042288 359 TRDRATD----ASMIEKLLE--KG-DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSM-FHGTTARGWKG-M 429 (515)
Q Consensus 359 dR~~~~~----~~~~~~~l~--~G-~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~-~~~~~~~~~~~-~ 429 (515)
||+++++ ++.+.+.++ +| +|+||||||||+++.+++||+|++++++|||||+|+|.... +......++.. .
T Consensus 74 ~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs~~~~l~~Fk~gaf~~~~pI~Pv~i~~~~~~~~~~~~~~~~~~~~ 153 (211)
T cd07991 74 DRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPNKFVDAFWNSSGYSSLM 153 (211)
T ss_pred eCCCchhHHHHHHHHHHHHhCCCCCeEEEecCccccCCCEEEeeccccccCCCeeEEEEEEecCccCCcccCCCCccHHH
Confidence 9988643 566777777 46 99999999999999999999998889999999999995431 11111011111 1
Q ss_pred CccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHH
Q 042288 430 DPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKY 490 (515)
Q Consensus 430 ~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~ 490 (515)
+.++.+..+...++|+|||||+++ . ++++++++++++|+.|++.++.++|++|.+||+
T Consensus 154 ~l~~~l~~~~~~v~v~~l~pi~~~-~--~~~~~~~l~~~v~~~i~~~l~~~~~~~~~~~~~ 211 (211)
T cd07991 154 YLFRLLTQPANVLEVEFLPVYTPS-E--EGEDPKEFANRVRLIMANKLGLPATDWTGEDKR 211 (211)
T ss_pred HHHHHhCCcceEEEEEECCCcccc-c--CCCCHHHHHHHHHHHHHHhcCCCccCCCCcccC
Confidence 223334455566999999999983 1 378999999999999999999999999999984
No 7
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional
Probab=100.00 E-value=8.7e-32 Score=262.71 Aligned_cols=175 Identities=15% Similarity=0.178 Sum_probs=145.2
Q ss_pred HHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeE
Q 042288 282 LVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVR 357 (515)
Q Consensus 282 ~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~ 357 (515)
+.+.+++++|++++++|.|++| .++|+|+||||+|++|++++...++++..+++|+ +|++||+++..|+++
T Consensus 41 ~~~~~~~~~g~~v~v~g~e~~p-----~~~~~IivaNH~S~lD~~~l~~~~~~~~~fvaK~el~~~P~~g~~~~~~g~i~ 115 (245)
T PRK15018 41 MFGRLAPLFGLKVECRKPADAE-----SYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLL 115 (245)
T ss_pred HHHHHHHHcCeEEEEEccCCCC-----CCCCEEEEECCCchHHHHHHHHHhCCCcEEEEeHHHhhCCHHHHHHHhCCCeE
Confidence 4455667899999999999998 5789999999999999999988777777899997 799999999999999
Q ss_pred EecCChhh----HHHHHHHHHc-C-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCc
Q 042288 358 LTRDRATD----ASMIEKLLEK-G-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWK 427 (515)
Q Consensus 358 idR~~~~~----~~~~~~~l~~-G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~ 427 (515)
|||+++++ ++++.+.+++ | +++||||||||.++.+.+||+|+ .++++||+||+|.++...+..
T Consensus 116 VdR~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~~g~l~~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~~------- 188 (245)
T PRK15018 116 IDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINL------- 188 (245)
T ss_pred EeCCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCccHHHHHHHHHcCCCEEEEEEECccccccc-------
Confidence 99988654 5566667765 6 89999999999999999999994 678999999999996432211
Q ss_pred cCCccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHc
Q 042288 428 GMDPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 428 ~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l 477 (515)
..+++++ ++|+++|||+++++ +..+.+++++++++.|++.+
T Consensus 189 ------~~~~~g~-i~v~~~~PI~~~~~--~~~~~~~l~~~v~~~i~~~~ 229 (245)
T PRK15018 189 ------NRLHNGL-VIVEMLPPIDVSQY--GKDQVRELAAHCRSIMEQKI 229 (245)
T ss_pred ------CCccCee-EEEEEcCCCcCCCC--ChhhHHHHHHHHHHHHHHHH
Confidence 1234666 99999999999754 23567899999999999865
No 8
>PRK11590 hypothetical protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=249.57 Aligned_cols=193 Identities=20% Similarity=0.287 Sum_probs=140.5
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhc-ccCccc----HHHHHHHHHHHcCCCHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLY-YYVSES----AGIRVLIFATFAGMKVPSI 101 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~~~~----~~~~~~~~~~~~G~~~~~l 101 (515)
++++++|||||||+.+++...|+.....+ .. ..... ..+.....+ .+.... .....+++..+.|++.+++
T Consensus 5 ~~k~~iFD~DGTL~~~d~~~~~~~~~~~~-~g-~~~~~---~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMFGSFLRYLLRR-QP-LNLLL---VLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARL 79 (211)
T ss_pred cceEEEEecCCCCcccchHHHHHHHHHHh-cc-hhhHH---HhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHH
Confidence 67899999999999888755554333122 11 11111 111111111 121111 1112345556679999999
Q ss_pred HHHHHHHhchhhc-CCCcHHHHHHH----HhCC-CEEEEecCcHHHHHHHHHhhcC---CcEEEeceEEEeCceeeeEEe
Q 042288 102 ESVARAVLPKFYS-GDLHPETWRVF----SSCG-RRCVLTANPRIMVEAFLKDFLG---ADMVIGTEICVYKGRSTGFVK 172 (515)
Q Consensus 102 ~~~~~~~~~~~~~-~~~~~~~~~~l----~~~G-~~vivSaS~~~~v~~ia~~~lG---id~vigt~l~~~~G~~tG~i~ 172 (515)
+++.++|.+.+.. -..+|.+.+.+ +++| .++|||+|++.+++++++. +| ++++|||++++ ++||++.
T Consensus 80 ~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~~~~~i~t~l~~---~~tg~~~ 155 (211)
T PRK11590 80 QALEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLPRVNLIASQMQR---RYGGWVL 155 (211)
T ss_pred HHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccccCceEEEEEEE---EEccEEC
Confidence 9999998654322 13477777755 3468 5677999999999999998 99 58999999987 7999999
Q ss_pred cCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCccc
Q 042288 173 SPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVS 230 (515)
Q Consensus 173 ~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A 230 (515)
|+|| +|++|+++|++|++. +...++|||||.||+|||+.|++|++|||+++|++++
T Consensus 156 g~~c-~g~~K~~~l~~~~~~-~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~~~ 211 (211)
T PRK11590 156 TLRC-LGHEKVAQLERKIGT-PLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQLE 211 (211)
T ss_pred CccC-CChHHHHHHHHHhCC-CcceEEEecCCcccHHHHHhCCCCEEECccHHhhccC
Confidence 9999 999999999999974 2445799999999999999999999999999998753
No 9
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.97 E-value=9.1e-31 Score=250.06 Aligned_cols=194 Identities=24% Similarity=0.289 Sum_probs=150.5
Q ss_pred CCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHH
Q 042288 26 REKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVA 105 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~ 105 (515)
+.+++++|||||||++ .+++.++... .+........ ....+.....-+ ...+....+++|++.++++++.
T Consensus 3 ~~~~L~vFD~D~TLi~-~~~~~~~~~~-~g~~~~v~~~-------t~~~~~~~~~~~-~~~~~~v~~l~g~~~~~v~~~~ 72 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-AELIDELARG-AGVGEEVLAI-------TERAMRGELDFE-ESLRLRVALLKGLPVEVLEEVR 72 (212)
T ss_pred CccceEEEecccchhh-HHHHHHHHHH-hCCHHHHHHH-------HHHHhcccccHH-HHHHHHHHHhCCCCHHHHHHHH
Confidence 4578999999999999 3334444322 2111111111 111111111111 1223456789999999999999
Q ss_pred HHHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCcccccc
Q 042288 106 RAVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKN 181 (515)
Q Consensus 106 ~~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~ 181 (515)
+++ ..++|. .+++|+++| +++|||||++++++|++++ ||+|+++|++++.+||.+||++.++.| .+++
T Consensus 73 ~~~------~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~-~~~~ 144 (212)
T COG0560 73 EEF------LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPIC-DGEG 144 (212)
T ss_pred Hhc------CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeec-Ccch
Confidence 987 224554 455888999 5678999999999999999 999999999999999999999999999 9999
Q ss_pred HHHHHHHHhcCCCCC--ceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCce
Q 042288 182 KAGALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPI 238 (515)
Q Consensus 182 K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i 238 (515)
|+++|++++...+.. .++|||||.||+|||+.|++|+++||++++++.|. .++|++
T Consensus 145 K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~-~~~~~~ 202 (212)
T COG0560 145 KAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALAD-VRIWPI 202 (212)
T ss_pred HHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHH-HhcChh
Confidence 999999998875443 58999999999999999999999999999999999 999987
No 10
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.97 E-value=2.2e-29 Score=239.63 Aligned_cols=195 Identities=24% Similarity=0.310 Sum_probs=149.6
Q ss_pred EEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHh
Q 042288 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVL 109 (515)
Q Consensus 30 lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~~ 109 (515)
+|+|||||||++++|++.|+.....+..................+..+........++....+++|++.+++++++++++
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 80 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEFV 80 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 48999999999999988887654332111111111111111122111111222224455667899999999999999999
Q ss_pred chhhcCCCcHHHHHH---HHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEE-eCceeeeEEecCCccccccHHH
Q 042288 110 PKFYSGDLHPETWRV---FSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICV-YKGRSTGFVKSPGVLVGKNKAG 184 (515)
Q Consensus 110 ~~~~~~~~~~~~~~~---l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~-~~G~~tG~i~~~~~~~g~~K~~ 184 (515)
++.+...+++++.+. ++++| .++|+|+|++.++++++++ +|+++++|+++.+ +||.+||++.+++| .|++|++
T Consensus 81 ~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~~~~~g~~~g~~~~~~~-~g~~K~~ 158 (202)
T TIGR01490 81 NQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLEESEDGIYTGNIDGNNC-KGEGKVH 158 (202)
T ss_pred HHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceEEcCCCEEeCCccCCCC-CChHHHH
Confidence 987778888888775 45789 6678999999999999998 9999999999998 68999999999888 9999999
Q ss_pred HHHHHhcCCCCC--ceEEEeCCcCcHHHHhccccceeeCCCCCC
Q 042288 185 ALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKESYMVPPNPKV 226 (515)
Q Consensus 185 ~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 226 (515)
+++++++..+.. .+++||||.+|+||++.|+++++|||+++|
T Consensus 159 ~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~l 202 (202)
T TIGR01490 159 ALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPDKKL 202 (202)
T ss_pred HHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCCCCC
Confidence 999998764322 479999999999999999999999999876
No 11
>PLN02833 glycerol acyltransferase family protein
Probab=99.96 E-value=4.8e-29 Score=255.47 Aligned_cols=196 Identities=16% Similarity=0.233 Sum_probs=147.4
Q ss_pred HHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccch-hhhhhcCCee
Q 042288 282 LVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRL-SELISPIKTV 356 (515)
Q Consensus 282 ~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~-g~~~~~~~~i 356 (515)
+++.++..++..++++|.++.+ ++|+|+||||+|++|++++.+..+ ..+++|+ .+++ +++++..|++
T Consensus 140 ~~~~~~~~~~~~i~v~G~e~~~------~~~~IiVaNH~S~lDi~vL~s~~p--~~~v~kk~~~~~~~~~~~~~~~~g~I 211 (376)
T PLN02833 140 ICSAFVASWTGVIKYHGPRPSR------RPKQVFVANHTSMIDFIVLEQMTP--FAVIMQKHPGWVGFLQNTILESVGCI 211 (376)
T ss_pred HHHHHHHHhEEEEEEECCcCCC------CCCEEEEECCCChHHHHHHHhhcC--ceEEEEehhhhhHHHHHHHHHHcCcE
Confidence 3444455556678899988765 568999999999999999998764 3566775 2333 3677889999
Q ss_pred EEecCChhhH----HHHHHHHH--cC-CeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcCccCccCcccC--CCc
Q 042288 357 RLTRDRATDA----SMIEKLLE--KG-DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTAR--GWK 427 (515)
Q Consensus 357 ~idR~~~~~~----~~~~~~l~--~G-~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~~~~~~~~--~~~ 427 (515)
+|||++.++. +.+++.++ +| +++||||||||+++.+++||+|++++++|||||+|+|.... .+..+. ...
T Consensus 212 ~VdR~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~-~~~fW~s~~~s 290 (376)
T PLN02833 212 WFNRTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIF-VDAFWNSRKQS 290 (376)
T ss_pred EecCCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCcccccchhhHhcCCeEEEEEEEecCcc-cccccCCCCcc
Confidence 9999876553 34555555 57 99999999999999999999998899999999999986432 111010 011
Q ss_pred cC-CccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHH
Q 042288 428 GM-DPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKY 490 (515)
Q Consensus 428 ~~-~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~ 490 (515)
+. +.++.+..+...++|+||||++++ ++++++++++++|+.|++.+|+...++...-||
T Consensus 291 ~~~~l~~ll~~~~~~v~V~~LpPi~~~----~~e~~~efA~rv~~~Ia~~lgi~~~~wdg~lk~ 350 (376)
T PLN02833 291 FTMHLLRLMTSWAVVCDVWYLEPQTLR----PGETPIEFAERVRDMIAKRAGLKKVPWDGYLKY 350 (376)
T ss_pred HHHhHHHHhCCCceEEEEEECCCcCCC----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCceee
Confidence 11 223344556677999999999876 378999999999999999999999887655544
No 12
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.95 E-value=1.2e-27 Score=229.94 Aligned_cols=167 Identities=22% Similarity=0.310 Sum_probs=137.9
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChh
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRAT 364 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~ 364 (515)
.++++++++|.+++|. .++|+|+||||+|++|++++.. ..+++.+++|+ +|++|+++...|+++|||++.+
T Consensus 32 ~~~~~~~v~g~e~lp~----~~~p~iiv~NH~S~~D~~~l~~-~~~~~~~v~k~~l~~~P~~g~~~~~~~~i~v~R~~~~ 106 (214)
T PLN02901 32 SPFYKIEVEGLENLPS----PDEPAVYVSNHQSFLDIYTLFH-LGRPFKFISKTSIFLIPIIGWAMYMTGHIPLKRMDRR 106 (214)
T ss_pred hcceeEEEECCccCCC----CCCcEEEEECCCCchHHHHHhh-cCCceEEEEEHHhhhccHHHHHHHHCCcEEEecCCcH
Confidence 4689999999999982 2579999999999999998865 45677899987 7999999999999999998764
Q ss_pred h----HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCcc-CccCcccCCCccCCcccc
Q 042288 365 D----ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMS-MFHGTTARGWKGMDPFYF 434 (515)
Q Consensus 365 ~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~-~~~~~~~~~~~~~~~~~~ 434 (515)
+ ++.+.+.|++| +++|||||||+.++.+.+|++|+ .+.++||+||++.|... ++.+. ++
T Consensus 107 ~~~~~~~~~~~~l~~g~~v~IfPEGtr~~~~~~~~f~~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~-----------~~ 175 (214)
T PLN02901 107 SQLECLKRCMELLKKGASVFFFPEGTRSKDGKLAAFKKGAFSVAAKTGVPVVPITLVGTGKIMPNGK-----------EG 175 (214)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCcccCchhhHHHHHHHcCCCEEEEEEecchhhCcCCC-----------cc
Confidence 3 56788899999 99999999999889999999994 45799999999998433 33322 12
Q ss_pred ccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCC
Q 042288 435 FMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSY 479 (515)
Q Consensus 435 ~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~ 479 (515)
..+++. ++|++++||+++ +.+++++++++.|++.++.
T Consensus 176 ~~~~~~-i~v~~~~pi~~~-------~~~~l~~~~~~~i~~~~~~ 212 (214)
T PLN02901 176 ILNPGS-VKVVIHPPIEGS-------DADELCNEARKVIAESLVQ 212 (214)
T ss_pred cccCCe-EEEEECCCcCCC-------CHHHHHHHHHHHHHHHhhh
Confidence 345666 999999999864 5789999999999987653
No 13
>PTZ00261 acyltransferase; Provisional
Probab=99.94 E-value=4e-26 Score=228.36 Aligned_cols=154 Identities=16% Similarity=0.175 Sum_probs=120.2
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcCC----CccEEEec----ccchhhhhhcCCeeEEecCCh---------hh----HHH
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALGR----PIPAVTYS----LSRLSELISPIKTVRLTRDRA---------TD----ASM 368 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~~----~~~~v~k~----~~~~g~~~~~~~~i~idR~~~---------~~----~~~ 368 (515)
++|+|++|||+|++|++++...++. ++.+++|+ +|++||++...|+|+|+|++. +. .+.
T Consensus 128 ~~~~IivsNHqS~lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~~v~~~ 207 (355)
T PTZ00261 128 RHGCAYVGNHTSFWDVYAFIGLTPFRHLLNTRTLMKSSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQAQVQQA 207 (355)
T ss_pred CCCEEEEECCCchHHHHHHHHHcccccccccEEEEHHHHhhccHHHHHHHHCCCeeeecccccccccccchHHHHHHHHH
Confidence 4689999999999999999998873 56889997 799999999999999998532 11 234
Q ss_pred HHHHHHcC-CeEEecCCeeeCCC-ccccccch-h---hccCCcEEEEEEEcCccCccCcccCCCccCCccccccCCCCeE
Q 042288 369 IEKLLEKG-DLVICPEGTTCREP-FLLRFSAL-F---AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAY 442 (515)
Q Consensus 369 ~~~~l~~G-~l~IFPEGTrs~~~-~l~~Fk~G-f---~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 442 (515)
+.+.|++| +++||||||||.++ .+++||+| | .+.++||+|+++.|+...|.... +....|++ +
T Consensus 208 ~~e~Lk~G~sLvIFPEGTRS~~gg~L~pFK~GaF~LAieagvPIVPvai~Gs~~~wP~g~----------~l~~~pg~-I 276 (355)
T PTZ00261 208 IDAHLRLGGSLAFFPEGAINKHPQVLQTFRYGTFATIIKHRMEVYYMVSVGSEKTWPWWM----------MIGGLPAD-M 276 (355)
T ss_pred HHHHHHCCCEEEEECCcCCcCCCCcCCCCcHHHHHHHHHcCCCEEEEEEeChhhcCCCCC----------ccCCCCce-E
Confidence 45789999 99999999999864 59999999 4 57899999999999654443220 11224666 9
Q ss_pred EEEEec-cccCccccCCCCCHHHHHHHHHHHHHHHcCC
Q 042288 443 EVTFLN-KLPYELTCSAGKSSHDVANYIQRLIATSLSY 479 (515)
Q Consensus 443 ~V~~l~-pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~ 479 (515)
+|+|++ ||+++ +.+.+++++.+++.|++..+.
T Consensus 277 ~V~iG~~PI~~~-----~~~~~eL~~~lr~lmqe~~~~ 309 (355)
T PTZ00261 277 HIRIGAYPIDYD-----RDSSKDVAVGLQQRMQKVRDE 309 (355)
T ss_pred EEEECCCCCCCC-----CCCHHHHHHHHHHHHHHHHHH
Confidence 999999 99986 567777777777666665443
No 14
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.
Probab=99.93 E-value=8.9e-25 Score=208.44 Aligned_cols=151 Identities=21% Similarity=0.297 Sum_probs=127.5
Q ss_pred HHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCC-CCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCe
Q 042288 281 PLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHR-TLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKT 355 (515)
Q Consensus 281 ~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~-S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~ 355 (515)
+|++.++++++.+++|+|.|++| .++|+|++|||+ |++|++++....++++.+++++ .|++++++..+|+
T Consensus 3 ~~~~~~~~~~~~~v~v~G~e~lp-----~~~~~I~v~NH~~s~~D~~~l~~~~~~~~~~v~~~~~~~~p~~~~~~~~~g~ 77 (203)
T cd07992 3 LLSRVILRIYFRRITVVGRENVP-----KDGPVIFLGNHPNALIDPLLLAATLRRPVRFLAKADLFKNPLIGWLLESFGA 77 (203)
T ss_pred EehhehhhhEeeeeEEECCccCC-----CCCCEEEEeCCccchhhHHHHHHhcCCCcEEEEEhhhccchHHHHHHHHcCc
Confidence 36788888999999999999998 678999999999 6899999998888888999987 5889999999999
Q ss_pred eEEecCCh------------hhHHHHHHHHHcC-CeEEecCCeeeCCCccccccchh---h-------ccCCcEEEEEEE
Q 042288 356 VRLTRDRA------------TDASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF---A-------ELTDEVVPVAMS 412 (515)
Q Consensus 356 i~idR~~~------------~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf---~-------~~~~pVvPV~i~ 412 (515)
++|+|++. ..++.+.+.|++| +++|||||||+.++.+.+||+|+ + ..++||+||+|.
T Consensus 78 ipI~r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~~~~~~~fk~G~~~lA~~a~~~~~~~vpIvPv~i~ 157 (203)
T cd07992 78 IPVYRPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHDRPRLLPLKAGAARMALEALEAGQKDVKIVPVGLN 157 (203)
T ss_pred eEeEcCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCccCcCccHHHHHHHHHhcCCCCCeEEeeeEE
Confidence 99999753 2356788899999 99999999999889999999994 2 268999999999
Q ss_pred cCccCccCcccCCCccCCccccccCCCCeEEEEEeccccCccc
Q 042288 413 NRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~ 455 (515)
|.... .+..+++|.|++||.+++.
T Consensus 158 ~~~~~-------------------~~~~~i~i~~g~pi~~~~~ 181 (203)
T cd07992 158 YEDKS-------------------RFRSRVLVEFGKPISVSAF 181 (203)
T ss_pred eCCCC-------------------CCCCeEEEEECCCcccccc
Confidence 85321 1123499999999988754
No 15
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.
Probab=99.91 E-value=1.8e-24 Score=198.81 Aligned_cols=132 Identities=18% Similarity=0.182 Sum_probs=108.1
Q ss_pred HHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh---cCCCccEEEec----ccchhhhhhcCCee
Q 042288 284 YYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA---LGRPIPAVTYS----LSRLSELISPIKTV 356 (515)
Q Consensus 284 ~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~---~~~~~~~v~k~----~~~~g~~~~~~~~i 356 (515)
+.+++++|++++ |. +|. .++|+|+||||+|++|++++... .++++.+++|+ +|+ |++++..|++
T Consensus 2 ~~~~~~~g~~~~--g~--~p~----~~~~~iiv~NH~S~~D~~~l~~~~~~~~~~~~~vak~~l~~~p~-g~~~~~~g~i 72 (163)
T cd07988 2 RLLLRLSGWRIE--GE--PPN----KPKFVVIGAPHTSNWDFVLGLLAAFALGLKISFLGKHSLFKPPL-GPFMRWLGGI 72 (163)
T ss_pred ceEEEecCEEEE--eE--cCC----CCceEEEEECCCccHHHHHHHHHHHhcCCceEEEEEHHhhhCcH-HHHHHHcCCE
Confidence 456778898865 43 341 24799999999999999998765 46778999997 688 9999999999
Q ss_pred EEecCChhh-HHHHHHHHHcC---CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCcc
Q 042288 357 RLTRDRATD-ASMIEKLLEKG---DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKG 428 (515)
Q Consensus 357 ~idR~~~~~-~~~~~~~l~~G---~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~ 428 (515)
+|||++... ++.+.+.+++| +++|||||||+.. .+||+|+ .++++||+||+|++..
T Consensus 73 ~V~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~~---~~fk~G~~~lA~~~~~PIvPv~i~~~~------------- 136 (163)
T cd07988 73 PVDRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSKV---DKWKTGFYHIARGAGVPILLVYLDYKR------------- 136 (163)
T ss_pred EeEcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCCC---cChhhHHHHHHHHcCCCEEEEEEecCc-------------
Confidence 999987644 77888888865 6999999999985 4899994 6789999999998741
Q ss_pred CCccccccCCCCeEEEEEeccccCc
Q 042288 429 MDPFYFFMNPSPAYEVTFLNKLPYE 453 (515)
Q Consensus 429 ~~~~~~~~~p~~~v~V~~l~pi~~~ 453 (515)
.+|+|+|||+++
T Consensus 137 -------------~~v~~g~pi~~~ 148 (163)
T cd07988 137 -------------KTVGIGPLFEPS 148 (163)
T ss_pred -------------EEEEECCcCcCC
Confidence 478999999986
No 16
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]
Probab=99.90 E-value=2.5e-23 Score=204.72 Aligned_cols=152 Identities=28% Similarity=0.393 Sum_probs=125.2
Q ss_pred HHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC--ccEEEec----ccchhhhhhcCCe
Q 042288 282 LVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP--IPAVTYS----LSRLSELISPIKT 355 (515)
Q Consensus 282 ~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~--~~~v~k~----~~~~g~~~~~~~~ 355 (515)
+.+.+++.++.+++|+|.|++| .++|+|+||||+|++|++++....+.. +.+++|+ +|++|+++...|+
T Consensus 40 ~~~~~~~~~~~r~~v~G~e~lp-----~~~~~ivvaNH~S~~D~~~l~~~~~~~~~~~f~~k~~l~~~p~~g~~~~~~~~ 114 (255)
T COG0204 40 LVLLLLLLFGLRVEVEGLENLP-----KGGPALVVANHQSFLDPLLLSLALPRRGPVRFVAKKELFKVPLLGWLLRLLGA 114 (255)
T ss_pred HHHHHHHHhCceEEEEeeecCC-----CCCCEEEEECchhhhhHHHHhhhcCCCcceEEEeehhhccCchHHHHHHHcCe
Confidence 4567778899999999999998 568999999999999999999988776 7899997 7899999999999
Q ss_pred eEEecCChhh--HHHHHHHHHc-C-CeEEecCCeeeCC-Cccccccchh----hccCCcEEEEEEEcCccCccCcccCCC
Q 042288 356 VRLTRDRATD--ASMIEKLLEK-G-DLVICPEGTTCRE-PFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGW 426 (515)
Q Consensus 356 i~idR~~~~~--~~~~~~~l~~-G-~l~IFPEGTrs~~-~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~ 426 (515)
+++||+++.. +....+.+++ | .++|||||||+++ ..+.+||.|+ .++++||+||++.|....+..
T Consensus 115 i~v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~~~~~~~~~k~g~~~~a~~~~~PivPv~i~g~~~~~~~------ 188 (255)
T COG0204 115 IPVDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVPVAIVGAEELFPS------ 188 (255)
T ss_pred eEecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCCCccccCCCcchHHHHHHHcCCCEEeEEEeCCcccccC------
Confidence 9999998753 4455555555 6 9999999999986 4599999994 567899999999996543221
Q ss_pred ccCCccccccCCCCeEEEEEeccccCcc
Q 042288 427 KGMDPFYFFMNPSPAYEVTFLNKLPYEL 454 (515)
Q Consensus 427 ~~~~~~~~~~~p~~~v~V~~l~pi~~~~ 454 (515)
..+.. +.+++++|+....
T Consensus 189 ---------~~~~~-~~~~~~~pi~~~~ 206 (255)
T COG0204 189 ---------LKKGK-VKVRIGPPIDISA 206 (255)
T ss_pred ---------CCcee-EEEEecCCcCccc
Confidence 11122 8899999998774
No 17
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.90 E-value=7.9e-23 Score=230.52 Aligned_cols=187 Identities=17% Similarity=0.128 Sum_probs=141.6
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChhhHH
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRATDAS 367 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~~~ 367 (515)
++++++|.+++| .++|+|+||||+|++|++++..+++++..+++|+ +|+++++++..|+++|||++...++
T Consensus 14 ~~~~v~g~~~~~-----~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~i~v~r~~~~~~~ 88 (718)
T PRK08043 14 YRVRVTGDTQAL-----KGERVLITPNHVSFLDGILLALFLPVRPVFAVYTSISQQWYMRWLKPYIDFVPLDPTKPMAIK 88 (718)
T ss_pred EEEEEEccccCC-----CCCCEEEEECCCchHHHHHHHHhCCCCeEEEEeHHHhhhHHHHHHHHhCCEEEecCCCHHHHH
Confidence 366688999998 5789999999999999999999998777788886 6889999999999999999988888
Q ss_pred HHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccccCCCCeE
Q 042288 368 MIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAY 442 (515)
Q Consensus 368 ~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 442 (515)
++.+.+++| +|+|||||||+.++.+.+||+|+ .++++|||||+|.+......... .... ...... .+
T Consensus 89 ~~~~~l~~g~~~~iFPEGtr~~~~~~~~~k~G~~~~a~~~~~pivPv~i~g~~~~~~~~~------~~~~-~~~~~~-~i 160 (718)
T PRK08043 89 HLVRLVEQGRPVVIFPEGRITVTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRL------KGLV-KRRLFP-QI 160 (718)
T ss_pred HHHHHHhCCCEEEEeCCCccCCCCCccCcchHHHHHHHHCCCCEEEEEEECCccCccccc------CCcc-ccccCC-ce
Confidence 899999999 99999999999999999999993 56899999999998543211110 0000 011122 38
Q ss_pred EEEEeccccCcccc--CCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHH
Q 042288 443 EVTFLNKLPYELTC--SAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYR 491 (515)
Q Consensus 443 ~V~~l~pi~~~~~~--~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~ 491 (515)
+|+|++|++..... .+.++.+.+++.+++.|.+.+....-..|..|...
T Consensus 161 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~ 211 (718)
T PRK08043 161 TLHILPPTQLPMPDAPRARDRRKLAGEMLHQIMMEARMAVRPRETLYEALL 211 (718)
T ss_pred EEEecCcccCCCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 99999997542110 01223557888999999988776554445555443
No 18
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=99.90 E-value=2.1e-23 Score=199.96 Aligned_cols=168 Identities=17% Similarity=0.213 Sum_probs=120.1
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCC-CCcHHHHHHhc---CCCccEEEec----ccchhhhhhcCCeeEEecCCh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRT-LLDPIFLSTAL---GRPIPAVTYS----LSRLSELISPIKTVRLTRDRA 363 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S-~lD~~~l~~~~---~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~ 363 (515)
++++++|.|++| .++|+|+||||+| ++|++++.+++ +.++.+++|+ +|+++++ .++|||.+.
T Consensus 8 ~~v~v~G~e~lp-----~~g~~iiv~NH~s~~~D~~~l~~~~~~~~~~~~~lak~~l~~~p~l~~~-----~i~v~r~~~ 77 (210)
T cd07986 8 LEVDVSGLENIP-----KDGPVVIVANHPFGILDGLILADLLGSVRPDVRILANQLLSKIPELRDL-----FIPVDPLEG 77 (210)
T ss_pred EEEecCchhcCC-----CCCCEEEEEcCCccchHHHHHHHHHHHhCCCeEEEeHHhhhhCcchHhh-----EEeccCCCC
Confidence 388899999998 6789999999987 59999987654 4567888887 3555554 588988754
Q ss_pred h--------hHHHHHHHHHcC-CeEEecCCeeeCCCc------cccccchh----hccCCcEEEEEEEcCccC-ccCccc
Q 042288 364 T--------DASMIEKLLEKG-DLVICPEGTTCREPF------LLRFSALF----AELTDEVVPVAMSNRMSM-FHGTTA 423 (515)
Q Consensus 364 ~--------~~~~~~~~l~~G-~l~IFPEGTrs~~~~------l~~Fk~Gf----~~~~~pVvPV~i~~~~~~-~~~~~~ 423 (515)
+ .++.+.+.|++| +++|||||||+..+. +.+||+|+ .++++||+||+|.+.... +....
T Consensus 78 ~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~~- 156 (210)
T cd07986 78 RAALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDRPWNPFVARLARKAKAPVVPVYFSGRNSRLFYLAG- 156 (210)
T ss_pred cchhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccCCccHHHHHHHHHHCCCEEEEEEeeeCcHHHHHHH-
Confidence 2 267788899999 999999999997543 68999995 567999999999984321 11000
Q ss_pred CCCccCC---ccc--cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHH
Q 042288 424 RGWKGMD---PFY--FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRL 472 (515)
Q Consensus 424 ~~~~~~~---~~~--~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ 472 (515)
..|.-.. ..+ +...+++ ++|+|++||+++++. ..++.+++++.+|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-v~v~~g~pI~~~~~~-~~~~~~~l~~~~~~~ 208 (210)
T cd07986 157 LIHPTLRTLLLPRELLNKRGKT-IRIRVGRPIPPEELA-RFEDAEELADFLRLH 208 (210)
T ss_pred ccCHHHHHHHHHHHHHHhCCCE-EEEEeCCcCCHHHHh-cCCCHHHHHHHHHHh
Confidence 0000000 001 1223445 999999999987542 246789999999874
No 19
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.89 E-value=1.7e-22 Score=238.73 Aligned_cols=175 Identities=15% Similarity=0.124 Sum_probs=135.0
Q ss_pred cceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChhh
Q 042288 290 LGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRATD 365 (515)
Q Consensus 290 ~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~ 365 (515)
..++++++|.||+|. .++|+|+||||+|++|++++...+|+++.+++|+ +|+++++++..|+++|||+++..
T Consensus 437 ~~~~~~~~g~~~~~~----~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~ 512 (1140)
T PRK06814 437 AFYRVEVKGLENLQK----AGKKAVIAANHVSFLDGPLLAAYLPEEPTFAIDTDIAKAWWVKPFLKLAKALPVDPTNPMA 512 (1140)
T ss_pred HeEEEEEeCCccccc----cCCCEEEEECCcchHHHHHHHHhCCCCeEEEEeHHHhhhhHHHHHHHhcCeeecCCCChHH
Confidence 468999999999982 2357999999999999999999999888999998 68899999999999999999888
Q ss_pred HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccccCCCC
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSP 440 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 440 (515)
++.+.+.+++| +++|||||||+.++.+.+||+|+ .++++||+||+|.+....+.... .+.+ ....++
T Consensus 513 ~~~~~~~l~~g~~~~ifPeGtr~~~~~~~~f~~g~~~~a~~~~~~i~pv~i~g~~~~~~~~~------~~~~-~~~~~~- 584 (1140)
T PRK06814 513 TRTLIKEVQKGEKLVIFPEGRITVTGSLMKIYDGPGMIADKAGAMVVPVRIDGLQFTHFSRL------KNQV-RRKWFP- 584 (1140)
T ss_pred HHHHHHHHHCCCEEEEeCCCCCCCCCCccccchHHHHHHHHCCCCEEEEEEcCccccccccc------CCCc-ccccCC-
Confidence 88889999999 99999999999999999999994 56899999999998543211100 0000 111223
Q ss_pred eEEEEEeccccCcccc--CCCCCHHHHHHHHHHHHHHH
Q 042288 441 AYEVTFLNKLPYELTC--SAGKSSHDVANYIQRLIATS 476 (515)
Q Consensus 441 ~v~V~~l~pi~~~~~~--~~~~~~~~la~~v~~~ia~~ 476 (515)
+++|+++|||.+++.. ...+.++.+.+.+++.|.+.
T Consensus 585 ~~~~~~~~~i~~~~~~~l~~~e~r~~~~~~l~~~~~~~ 622 (1140)
T PRK06814 585 KVTVTILPPVKLAVDPELKGRERRSAAGAALYDIMSDM 622 (1140)
T ss_pred ceEEEecCCcccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 4999999999876431 01223345555566655543
No 20
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.89 E-value=2.7e-22 Score=236.94 Aligned_cols=170 Identities=22% Similarity=0.298 Sum_probs=134.0
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChh
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRAT 364 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~ 364 (515)
.++.+++++|.|++| .++|+|++|||+|++|++++...+++++.+++|+ +|+++++++..|+|+|||++.+
T Consensus 424 ~~~~~~~v~g~e~lp-----~~~~~i~~~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~ 498 (1146)
T PRK08633 424 HTRYRLRVEGRENIP-----AKGGALLLGNHVSWIDWALLQAASPRPIRFVMERSIYEKWYLKWFFKLFGVIPISSGGSK 498 (1146)
T ss_pred HceEEEEEECCcCCC-----CCCCEEEEECCCchHHHHHHHHHcCCCeEEEeeHHhhhChhHHHHHHHCCEEEecCCChH
Confidence 456788999999998 6789999999999999999999999888999997 6889999999999999998865
Q ss_pred h-HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcC-ccCccCcccCCCccCCccccccC
Q 042288 365 D-ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNR-MSMFHGTTARGWKGMDPFYFFMN 437 (515)
Q Consensus 365 ~-~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~-~~~~~~~~~~~~~~~~~~~~~~~ 437 (515)
+ ++.+.+.+++| +++|||||||+.++.+.+||+|+ .++++|||||+|.+. ...+.... ..++ ..+....
T Consensus 499 ~~~~~~~~~l~~g~~~~ifPeGt~~~~~~~~~~~~g~~~~a~~~~~~i~pv~~~g~~~~~~~~~~-~~~~---~~~~~~~ 574 (1146)
T PRK08633 499 ESLEFIRKALDDGEVVCIFPEGAITRNGQLNEFKRGFELIVKGTDVPIIPFYIRGLWGSIFSRAS-GKFL---WRWPTRI 574 (1146)
T ss_pred HHHHHHHHHHhCCCEEEEECCcCCCCCCCccchhHHHHHHHHHCCCCEEEEEEeccccccccccc-cccc---ccccCCC
Confidence 5 78888999999 99999999999999999999995 578999999999983 22211110 0000 0011223
Q ss_pred CCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHH
Q 042288 438 PSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIA 474 (515)
Q Consensus 438 p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia 474 (515)
+++ ++|+|++||+++ ...+++.+.+++...
T Consensus 575 ~~~-v~v~~~~pi~~~------~~~~~~~~~~~~l~~ 604 (1146)
T PRK08633 575 PYP-VTVAFGKPMPAH------STAHEVKQAVFELSF 604 (1146)
T ss_pred Cce-EEEEECCCcCcc------cCHHHHHHHHHHHHH
Confidence 444 999999999875 345666666655443
No 21
>PLN02783 diacylglycerol O-acyltransferase
Probab=99.88 E-value=7.2e-22 Score=199.27 Aligned_cols=123 Identities=20% Similarity=0.179 Sum_probs=102.1
Q ss_pred HHHHHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHH-----HhcC-CCccEEEec----ccchhhhh
Q 042288 281 PLVYYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLS-----TALG-RPIPAVTYS----LSRLSELI 350 (515)
Q Consensus 281 ~~~~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~-----~~~~-~~~~~v~k~----~~~~g~~~ 350 (515)
++.+.....+|++++++|.|++| .++++|+++||+|.+|+.++. ..++ +++.+++|+ +|++++++
T Consensus 76 ~i~~~~~~~~~~~v~v~g~e~l~-----~~~~~I~~~nH~S~ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~~g~~~ 150 (315)
T PLN02783 76 FICKYACAYFPVRLHVEDEEAFD-----PNRAYVFGYEPHSVLPIGVIALADLSGFLPLPKIRALASSAVFYTPFLRHIW 150 (315)
T ss_pred HHHHHHHHhcCeEEEEEchhhCC-----CCCCEEEEECCCcchhhHHHhhhhhhhccCCCchHHHhhhhhccCcHHHHHH
Confidence 35566666899999999999998 688999999999999988742 2355 577888887 79999999
Q ss_pred hcCCeeEEecCChhhHHHHHHHHHcC-CeEEecCCeee-----CC--Cccccccchh----hccCCcEEEEEEEcC
Q 042288 351 SPIKTVRLTRDRATDASMIEKLLEKG-DLVICPEGTTC-----RE--PFLLRFSALF----AELTDEVVPVAMSNR 414 (515)
Q Consensus 351 ~~~~~i~idR~~~~~~~~~~~~l~~G-~l~IFPEGTrs-----~~--~~l~~Fk~Gf----~~~~~pVvPV~i~~~ 414 (515)
..+|.+++||++ +.+.|++| +++|||||||+ .+ ..+++||+|| .++|+||+||++.+.
T Consensus 151 ~~~G~ipv~R~~------~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~ 220 (315)
T PLN02783 151 TWLGLDPASRKN------FTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQ 220 (315)
T ss_pred HHcCCeEEcHHH------HHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECc
Confidence 999999999974 56788899 99999999983 22 3356899995 678999999999994
No 22
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=99.86 E-value=2.5e-22 Score=191.78 Aligned_cols=144 Identities=23% Similarity=0.279 Sum_probs=105.0
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcC---CCccEEEec----ccchhhhhhcCCeeEEecCChhh------H-HHHHHHHHc
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALG---RPIPAVTYS----LSRLSELISPIKTVRLTRDRATD------A-SMIEKLLEK 375 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~---~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~------~-~~~~~~l~~ 375 (515)
++|+|+||||+|++|++++...++ .++.+++++ +|++|++++.+|+++|+|++... + +.+.+.+++
T Consensus 21 ~~~~i~v~NH~S~lD~~~l~~~~~~~~~~~~~va~~e~~~~~~~g~~l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l~~ 100 (205)
T cd07993 21 GHPVVLLPTHRSYLDFLLLSFILFSLGLPLPHIAAGENLNIPILGTLLRRLGAFFIRRSFGKDPLYRAVLQEYVQELLKN 100 (205)
T ss_pred CCCEEEEecCcchhHHHHHHHHHHHCCCCCcEEEEchhhCcHHHHHHHHHCCCEEEecCCCccHHHHHHHHHHHHHHHhC
Confidence 479999999999999999988753 356777765 67899999999999999986421 2 345678899
Q ss_pred C-CeEEecCCeeeCCCccccccchh----hcc-------CCcEEEEEEEcCccCccCccc----CC-C-c-----c-CCc
Q 042288 376 G-DLVICPEGTTCREPFLLRFSALF----AEL-------TDEVVPVAMSNRMSMFHGTTA----RG-W-K-----G-MDP 431 (515)
Q Consensus 376 G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~-------~~pVvPV~i~~~~~~~~~~~~----~~-~-~-----~-~~~ 431 (515)
| +++||||||||+++.+.+||+|+ .++ ++|||||+|.|.... .+... .+ . . . ...
T Consensus 101 g~~l~iFPEGtrs~~g~~~~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~ 179 (205)
T cd07993 101 GQPLEFFIEGTRSRTGKLLPPKLGLLSVVVEAYLKGSVPDVLIVPVSISYDRVL-EEELYAEELLGPPKPKESLSGLLGA 179 (205)
T ss_pred CceEEEEcCCCCCCCCCccchHHHHHHHHHHHHhhCCCCCeEEEEeEEeeCccc-chHHHHHHHcCCCCCCccHHHHHHH
Confidence 9 99999999999999999999994 233 899999999995421 11100 01 0 0 0 011
Q ss_pred cccccCCCCeEEEEEeccccCcc
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYEL 454 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~ 454 (515)
+..+..+..+++|+|++||+.++
T Consensus 180 ~~~l~~~~g~v~v~~~~Pi~~~~ 202 (205)
T cd07993 180 SKILRENFGRIRVDFGEPISLRE 202 (205)
T ss_pred HHHhhccCCeEEEECCCCcCHHH
Confidence 11234444449999999998763
No 23
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.
Probab=99.86 E-value=8.7e-22 Score=189.12 Aligned_cols=175 Identities=19% Similarity=0.205 Sum_probs=123.3
Q ss_pred eEE-EEcCCCCCCCCCCCCCCcEEEEeCCCCCC-cHHHHHHh-----cCCCccEEEec----ccchhhhhhcCCeeEEec
Q 042288 292 VRV-YIKGTPPPPAQKSSGQTGVLFICSHRTLL-DPIFLSTA-----LGRPIPAVTYS----LSRLSELISPIKTVRLTR 360 (515)
Q Consensus 292 vrv-~v~G~e~~p~~~~~~~~~~IiVaNH~S~l-D~~~l~~~-----~~~~~~~v~k~----~~~~g~~~~~~~~i~idR 360 (515)
.++ +|+|.|++| .++|+|+++||+|++ |++++... .++++.+++++ +|++++++..+|+++++|
T Consensus 5 ~~~~~v~g~e~lp-----~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p~~~~~~~~~g~i~~~r 79 (212)
T cd07987 5 FRVYEVRGLENIP-----DEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLPGLRDLLRRLGAVPGSR 79 (212)
T ss_pred eeeEEEeccccCC-----CCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCccHHHHHHHcCCcccCH
Confidence 355 899999998 678999999999999 99999876 23556788765 577899999999999887
Q ss_pred CChhhHHHHHHHHHcC-CeEEecCCeeeCC-------Cccccccchh----hccCCcEEEEEEEcCccC-ccCcccCCCc
Q 042288 361 DRATDASMIEKLLEKG-DLVICPEGTTCRE-------PFLLRFSALF----AELTDEVVPVAMSNRMSM-FHGTTARGWK 427 (515)
Q Consensus 361 ~~~~~~~~~~~~l~~G-~l~IFPEGTrs~~-------~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~-~~~~~~~~~~ 427 (515)
+ .+.+.|++| +++|||||||+.. ..+.+||+|| .++++||+||++.|.... +......+..
T Consensus 80 ~------~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~ 153 (212)
T cd07987 80 E------NCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDGPV 153 (212)
T ss_pred H------HHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCCCc
Confidence 4 467788899 9999999999732 2388999995 668999999999995433 2211100000
Q ss_pred cCCccccccCCC-CeEEEEEeccccCccccC---CCCCHHHHHHHHHHHHHHHc
Q 042288 428 GMDPFYFFMNPS-PAYEVTFLNKLPYELTCS---AGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 428 ~~~~~~~~~~p~-~~v~V~~l~pi~~~~~~~---~~~~~~~la~~v~~~ia~~l 477 (515)
.....|.+..|. ..++|.|++||....... +.++.+++.+++++.|++.+
T Consensus 154 ~~~~~~~l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 207 (212)
T cd07987 154 GKRLFRLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELI 207 (212)
T ss_pred eeehhceeccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 111122233332 249999999998753210 12344567777777666653
No 24
>PRK14014 putative acyltransferase; Provisional
Probab=99.86 E-value=1.5e-20 Score=188.79 Aligned_cols=124 Identities=15% Similarity=0.075 Sum_probs=99.2
Q ss_pred hHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC---ccEEEec----ccchhhhhhcCCeeEEe
Q 042288 287 FWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP---IPAVTYS----LSRLSELISPIKTVRLT 359 (515)
Q Consensus 287 ~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~---~~~v~k~----~~~~g~~~~~~~~i~id 359 (515)
.++.|++++|+|.|+++ .++++|+||||||++|++++.+++++. +.+++|+ +|++|+.+..+|.++++
T Consensus 68 ~~~~g~k~~V~G~e~l~-----~~~~~IiisNHqS~~D~l~l~~~~~~~~~~~kfv~K~eL~~iP~~G~~~~~~~~ifi~ 142 (301)
T PRK14014 68 RLLPRTQWDVEGLEGLS-----KKGWYLVISNHQSWVDILVLQYVFNRRIPMLKFFLKQELIWVPFLGLAWWALDFPFMK 142 (301)
T ss_pred HHhCCcEEEEEcCCCCC-----CCCCEEEEECCCcHHHHHHHHHHHhhccCceEEEehHHhhhcccHHHHHHHcCCeEEe
Confidence 34789999999999997 678999999999999999999888653 4688987 79999999999999999
Q ss_pred cCChhh-----------H---HHHHHHHHc-C-CeEEecCCeeeCC----------Cccccccch-h---hcc----CCc
Q 042288 360 RDRATD-----------A---SMIEKLLEK-G-DLVICPEGTTCRE----------PFLLRFSAL-F---AEL----TDE 405 (515)
Q Consensus 360 R~~~~~-----------~---~~~~~~l~~-G-~l~IFPEGTrs~~----------~~l~~Fk~G-f---~~~----~~p 405 (515)
|++++. . +++.+.+++ | +++|||||||+.. +.+++||+| | .++ -.+
T Consensus 143 R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~~~~~ 222 (301)
T PRK14014 143 RYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGEQFDG 222 (301)
T ss_pred ccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhccCCE
Confidence 976422 2 223333444 5 8999999999633 378999999 5 233 269
Q ss_pred EEEEEEEcCc
Q 042288 406 VVPVAMSNRM 415 (515)
Q Consensus 406 VvPV~i~~~~ 415 (515)
|+||+|.|..
T Consensus 223 I~dvti~y~~ 232 (301)
T PRK14014 223 LLDVTIVYPD 232 (301)
T ss_pred EEEEEEEeCC
Confidence 9999999954
No 25
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.86 E-value=3.1e-21 Score=183.50 Aligned_cols=175 Identities=14% Similarity=0.110 Sum_probs=125.7
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHH-HHHHHHHcCCCHHHHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIR-VLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~~~~~G~~~~~l~~~~~ 106 (515)
|++|+||+||||+++ .|..++. +.+. . ... ..........+. .+ +....-..|++.++++++.+
T Consensus 1 ~~la~FDlD~TLi~~--~w~~~~~---~~g~-~-~~~-------~~~~~~~~~~~~-~~~r~~ll~~~g~~~~~i~~~~~ 65 (203)
T TIGR02137 1 MEIACLDLEGVLVPE--IWIAFAE---KTGI-D-ALK-------ATTRDIPDYDVL-MKQRLRILDEHGLKLGDIQEVIA 65 (203)
T ss_pred CeEEEEeCCcccHHH--HHHHHHH---HcCC-c-HHH-------HHhcCCcCHHHH-HHHHHHHHHHCCCCHHHHHHHHH
Confidence 689999999999985 3554432 1121 1 110 000111111221 22 22111235999999987655
Q ss_pred HHhchhhcCCCcHH---HHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeC-ceeeeEEecCCccccccH
Q 042288 107 AVLPKFYSGDLHPE---TWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYK-GRSTGFVKSPGVLVGKNK 182 (515)
Q Consensus 107 ~~~~~~~~~~~~~~---~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~-G~~tG~i~~~~~~~g~~K 182 (515)
.. .++|. .++.|+++|.++|||++++.++++++++ +|+++++|+++++++ |.+||... + .+++|
T Consensus 66 ~i-------~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~---~-~~~~K 133 (203)
T TIGR02137 66 TL-------KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQL---R-QKDPK 133 (203)
T ss_pred hC-------CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeee---c-CcchH
Confidence 42 13444 4556677777788999999999999998 999999999999988 99999764 3 57789
Q ss_pred HHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 183 AGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
...++++... ...+++||||.||+||++.|+.++++++++.+++.|.
T Consensus 134 ~~~l~~l~~~--~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~ 180 (203)
T TIGR02137 134 RQSVIAFKSL--YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFP 180 (203)
T ss_pred HHHHHHHHhh--CCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCC
Confidence 9999888433 3468999999999999999999999999999998876
No 26
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=99.83 E-value=2.4e-20 Score=164.43 Aligned_cols=117 Identities=24% Similarity=0.399 Sum_probs=103.3
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChhh-
Q 042288 291 GVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRATD- 365 (515)
Q Consensus 291 Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~- 365 (515)
|++++++|.+++| +++|+|+++||+|++|.+++...+++++.++++. .|++++++...|+++|+|++..+
T Consensus 1 ~~~~~v~g~~~lp-----~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~i~r~~~~~~ 75 (130)
T TIGR00530 1 GLKVEVVGPENLP-----AKSPVLVVANHQSNLDPLTLSAAFPPPIVFIAKKELKWIPFFGIMLWLTGAIFIDRENIRAI 75 (130)
T ss_pred CcEEEEECcccCC-----CCCCEEEEECCCchhHHHHHHHHcCCCcEEEEhHHhhhCCHHHHHHHHcCCEEecCCChHHH
Confidence 6899999999998 6789999999999999999988887778888886 68899999999999999987433
Q ss_pred ---HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEE
Q 042288 366 ---ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMS 412 (515)
Q Consensus 366 ---~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~ 412 (515)
++.+.+.+++| +++|||||+++.++.+.+|++|+ .++++||+||.++
T Consensus 76 ~~~~~~~~~~l~~g~~v~ifPeG~~~~~~~~~~f~~g~~~la~~~~~pvvpv~~~ 130 (130)
T TIGR00530 76 ATALKAAIEVLKQGRSIGVFPEGTRSRGRDILPFKKGAFHIAIKAGVPILPVVLS 130 (130)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCCCcchhHHHHHHHcCCCEEeEEeC
Confidence 56778889999 99999999999889999999994 5679999999874
No 27
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=99.82 E-value=8.9e-20 Score=173.47 Aligned_cols=171 Identities=11% Similarity=0.098 Sum_probs=124.1
Q ss_pred CCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec-----------ccchhhhhhcCCeeEEecCC-----
Q 042288 299 TPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS-----------LSRLSELISPIKTVRLTRDR----- 362 (515)
Q Consensus 299 ~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~-----------~~~~g~~~~~~~~i~idR~~----- 362 (515)
.|++| .++++|++|||+|++|++++..+++++..+++++ .|++++++...|.++|+|++
T Consensus 15 ~e~ip-----~~~~vIl~sNH~S~~Dp~ii~~~~~r~~~~lAk~~lf~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~~~ 89 (235)
T cd07985 15 EEQLA-----QGHNVVLLANHQTEADPAVISLLLEKTHPYLAENMIYVAGDRVVSDPLCKPFSMGRNLLCVHSKKHIDDP 89 (235)
T ss_pred HHhcc-----CCCCEEEEECCcccccHHHHHHHhccccHHHhhhhheeccccccccHhHHHHHhhCCceeeecCcccccc
Confidence 47787 6789999999999999999999998776666665 36678888899999999976
Q ss_pred -----------hhhHHHHHHHHHcC-C-eEEecCCeeeCCCccccccch-h------------hccCCc--EEEEEEEcC
Q 042288 363 -----------ATDASMIEKLLEKG-D-LVICPEGTTCREPFLLRFSAL-F------------AELTDE--VVPVAMSNR 414 (515)
Q Consensus 363 -----------~~~~~~~~~~l~~G-~-l~IFPEGTrs~~~~l~~Fk~G-f------------~~~~~p--VvPV~i~~~ 414 (515)
.++++.+.+.|++| . ++|||||||++.+...+.++| | ..+++| |+|++|.++
T Consensus 90 P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p~~Fd~~~~~~~~~La~~s~~p~hi~Plai~~y 169 (235)
T cd07985 90 PELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYPDPFDPSAVEMMRLLAQKSRVPTHLYPMALLTY 169 (235)
T ss_pred hhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccCCccchHHHHHHHHHHHhcCCCceEEeeEEEee
Confidence 12367788889998 5 789999999964444555554 2 457899 999999988
Q ss_pred ccCccCcccCCCccCCccccccCCCCeEEEEEeccccCccccC----CCCCHHHHHHHHHHHHHHHcC
Q 042288 415 MSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCS----AGKSSHDVANYIQRLIATSLS 478 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~----~~~~~~~la~~v~~~ia~~l~ 478 (515)
+.++.+.+.-- ...+. ...++. .+.|.+++||+.++... +.+..+++++.+.+.|.+.++
T Consensus 170 di~Ppp~~v~~-~ige~--r~~~f~-~v~i~vg~~i~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y~ 233 (235)
T cd07985 170 DIMPPPKQVEK-EIGEK--RAVAFT-GVGLAVGEEIDFSAIAATHKDPEEVREAFSKAAFDSVKRLYN 233 (235)
T ss_pred cccCCCccccc-ccccc--cccccc-ceEEEecCCccchhhhcccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 77776552100 00000 012223 49999999998875411 124466799999888887654
No 28
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis. Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p
Probab=99.82 E-value=4.2e-19 Score=166.59 Aligned_cols=162 Identities=26% Similarity=0.376 Sum_probs=129.3
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhc----CCCccEEEecccc-hhhhhhcCCeeEEecCCh
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL----GRPIPAVTYSLSR-LSELISPIKTVRLTRDRA 363 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~----~~~~~~v~k~~~~-~g~~~~~~~~i~idR~~~ 363 (515)
+.+++++++|.+++| .++|+|+++||+|++|.+++...+ .+++.+++++... ..++++..|.++++|.+.
T Consensus 9 ~~~~~~~~~g~~~~p-----~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~i~r~~~ 83 (187)
T cd06551 9 FGFVRLEVKGPPPPP-----GGGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELLERYPFFTRLGAFSVDRDSP 83 (187)
T ss_pred cceEEEEEeccccCC-----CCCCEEEEEcchhhHHHHHHHHHHHhccCCCeEEEEcHhhhhhChHHhhcCeEEecCCCh
Confidence 368999999999998 678999999999999999998876 3567778876332 566777779999999764
Q ss_pred ----hhHHHHHHHHHc-C-CeEEecCCeeeCCC-ccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 364 ----TDASMIEKLLEK-G-DLVICPEGTTCREP-FLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 364 ----~~~~~~~~~l~~-G-~l~IFPEGTrs~~~-~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
..++.+.+.+++ | .++||||||++... .+.+|++|+ .+.++||+||++.+....+
T Consensus 84 ~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~~~~~~~~~g~~~la~~~~~~IvPv~i~~~~~~~-------------- 149 (187)
T cd06551 84 RSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRDKRPLQFKPGVAHLAEKAGVPIVPVALRYTFELF-------------- 149 (187)
T ss_pred hhHHHHHHHHHHHHhcCCcEEEEeCCcccCCCCCCcccccchHHHHHHHcCCcEEEEEEecccccc--------------
Confidence 337888899999 8 89999999999776 889999995 4568999999999864321
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHc
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l 477 (515)
.+...++|.+++||..++ ..+.+++++.+.+.|.+.+
T Consensus 150 ----~~~~~~~i~~~~pi~~~~----~~~~~~~~~~~~~~~~~~~ 186 (187)
T cd06551 150 ----EQFPEIFVRIGPPIPYAE----TALGEELAAELANRLTRLL 186 (187)
T ss_pred ----CCCCcEEEEECCCccccc----cccHHHHHHHHHHHHHHhc
Confidence 122349999999999873 4556778888877777654
No 29
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.81 E-value=3.8e-19 Score=180.22 Aligned_cols=188 Identities=19% Similarity=0.223 Sum_probs=137.1
Q ss_pred CCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHH
Q 042288 25 GREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESV 104 (515)
Q Consensus 25 ~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~ 104 (515)
.+..++++|||||||+..++ +..+... .+.+.....+. ..+..+.+...+ .+++. ...++|.+++.++++
T Consensus 107 ~~~~~LvvfDmDGTLI~~e~-i~eia~~-~g~~~~v~~it------~~~m~Geldf~e-sl~~r-v~~l~g~~~~il~~v 176 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQIEC-IDEIAKL-AGTGEEVAEVT------ERAMRGELDFEA-SLRQR-VATLKGADANILQQV 176 (322)
T ss_pred ccCCCEEEEECCCCCcchHH-HHHHHHH-hCCchHHHHHH------HHHHcCCcCHHH-HHHHH-HHHhCCCCHHHHHHH
Confidence 35689999999999998655 4444332 22122222211 111112222222 13332 346789887777665
Q ss_pred HHHHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccc
Q 042288 105 ARAVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 105 ~~~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++. + ++|. .++.++++| +++|+|+++..+++++.++ +|+++++++.+++.+|++||.+.+..+ .++
T Consensus 177 ~~~l-~------l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv-~~k 247 (322)
T PRK11133 177 RENL-P------LMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIV-DAQ 247 (322)
T ss_pred HHhC-C------CChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccC-Ccc
Confidence 4331 1 3444 456778899 6788999999999999998 999999999999999999999998755 788
Q ss_pred cHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 181 NKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 181 ~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
.|.+.+++++...+. ..++++|||.||++|++.||.++++|+++++++.|.
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad 300 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQ 300 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCC
Confidence 999999988765432 358999999999999999999999999999999887
No 30
>PRK03355 glycerol-3-phosphate acyltransferase; Validated
Probab=99.81 E-value=6.4e-20 Score=201.70 Aligned_cols=183 Identities=16% Similarity=0.106 Sum_probs=123.7
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC----CccEEEec---ccchhhhhhcCCeeEEecCCh
Q 042288 291 GVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR----PIPAVTYS---LSRLSELISPIKTVRLTRDRA 363 (515)
Q Consensus 291 Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~----~~~~v~k~---~~~~g~~~~~~~~i~idR~~~ 363 (515)
++.+.+.+.+++.... .++|+|+|+||+|++|++++..++.+ +..++++. .|++|++++..|++||+|+..
T Consensus 249 ~v~v~~~~~~~lr~~~--~~~~vV~vpNHrS~lD~lll~~~l~~~gl~~~~i~Ag~~L~~~~lG~llr~~Ga~fIrR~~~ 326 (783)
T PRK03355 249 EIDYDEYELAALRALL--EEHPAVLLFSHRSYIDGLVVPVAMQENRLPPVHVFGGINLSFGPMGPIMRRSGMIFIRRNIG 326 (783)
T ss_pred cceeCHHHHHHHHhcc--CCCCEEEEECCCcchHHHHHHHHHhhcCCCCcEEEeHHHhccHHHHHHHHHcCcEEecCCCC
Confidence 6677777655543100 46799999999999999999887753 34555665 678999999999999999763
Q ss_pred h--h----HHHHHHH-HHcC-CeEEecCCeeeCCCccccccchh-----------hccCCcEEEEEEEcCccCccCccc-
Q 042288 364 T--D----ASMIEKL-LEKG-DLVICPEGTTCREPFLLRFSALF-----------AELTDEVVPVAMSNRMSMFHGTTA- 423 (515)
Q Consensus 364 ~--~----~~~~~~~-l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf-----------~~~~~pVvPV~i~~~~~~~~~~~~- 423 (515)
. . ++...+. +++| ++.+|||||||+++.+++||.|. ...++|||||+|.|.+.+-.+...
T Consensus 327 ~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRSrtGkLl~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~Yd~v~E~~~y~~ 406 (783)
T PRK03355 327 DDPLYKYVLREYVGYLVEKRFNLSWYIEGTRSRTGKLLPPKLGLLSYVADAYLDGRSDDVLLQPVSISFDQLHEIGEYAA 406 (783)
T ss_pred chHHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCCCCCcccccHHHHHHHHHHhcccCCCEEEEEEEEecccccchhHHH
Confidence 2 2 3333444 4578 99999999999999999999993 136899999999986544322211
Q ss_pred --CC-CccCCcccccc--------CCCCeEEEEEeccccCccccCCC---------CC---HHHHHHHHHHHHHH
Q 042288 424 --RG-WKGMDPFYFFM--------NPSPAYEVTFLNKLPYELTCSAG---------KS---SHDVANYIQRLIAT 475 (515)
Q Consensus 424 --~~-~~~~~~~~~~~--------~p~~~v~V~~l~pi~~~~~~~~~---------~~---~~~la~~v~~~ia~ 475 (515)
.| -+..+.+++++ .....+.|+|++||+.+++.... .+ .+.++.+|...|.+
T Consensus 407 e~~G~~k~~esl~~~~~~~~~l~~~~~G~i~V~fGePisl~~~~~~~~~~~~~~~~~~~~~~~~la~~Vm~~In~ 481 (783)
T PRK03355 407 EARGGEKTPEGLRWLYNYIKAQGERNYGKIYVRFGEPVSMRQYLGAPHGPLTQDPDAKRLALQKMAFEVAWRINQ 481 (783)
T ss_pred HhcCCCcccccHHHHHHHHHHhccCCceeEEEEECCCCCHHHhhccccccccccchhhHHHHHHHHHHHHHHHHh
Confidence 12 12222222111 22234999999999988753211 01 23466666666655
No 31
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.
Probab=99.81 E-value=1.6e-19 Score=170.18 Aligned_cols=172 Identities=14% Similarity=0.187 Sum_probs=123.8
Q ss_pred HhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec---ccchhhhhhcCCeeEEecCCh-
Q 042288 288 WALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS---LSRLSELISPIKTVRLTRDRA- 363 (515)
Q Consensus 288 ~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~---~~~~g~~~~~~~~i~idR~~~- 363 (515)
+.++.+++++|.|+++..- ..++|+|+++||+|.+|++++... +.++.+++++ .+++++++...|.++|+|++.
T Consensus 4 ~~~~~~~~v~g~e~l~~~~-~~~~~~I~~~~H~s~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~~i~r~~~~ 81 (189)
T cd07983 4 LYLTLRWRVIGDESADALI-AQGEPVILAFWHGRLLLMPYLFRR-RKRIAALISRSKDGEIIARVLERLGIRVVRGSSSR 81 (189)
T ss_pred eeEeEeEEEeCchhhhhhc-cCCCCEEEEEeCchHHHhHHHhcc-CCCeEEEEecCcCHHHHHHHHHHhCCCEEEcCCCC
Confidence 3578899999999986100 025799999999999999998765 5677778776 577888899999999998643
Q ss_pred ---hhHHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccc
Q 042288 364 ---TDASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFF 435 (515)
Q Consensus 364 ---~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~ 435 (515)
+.++.+.+.|++| +++|||||||+. ..+|++|+ .++++||+||++.+...+..+. |.. +.+
T Consensus 82 ~~~~~~~~~~~~lk~g~~v~ifpeG~r~~---~~~~~~G~~~lA~~~~~pIvPv~i~~~~~~~~~~----~~~----~~~ 150 (189)
T cd07983 82 GGAAALREMLRALKDGYNIAITPDGPRGP---RYKVKPGVILLARKSGAPIVPVAIAASRAWRLKS----WDR----FII 150 (189)
T ss_pred cHHHHHHHHHHHHhCCCEEEEcCCCCCCc---ceecchHHHHHHHHhCCCEEEEEEEEEccEeccC----ccc----ccc
Confidence 3377888899999 999999999864 35799993 5689999999998853322211 100 012
Q ss_pred cCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHc
Q 042288 436 MNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 436 ~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l 477 (515)
..+..+++|.|++||++++ ..+ ++..+++.+.+.+.+
T Consensus 151 p~~~~~~~v~~~~pi~~~~----~~~-~~~~~~~~~~~~~~~ 187 (189)
T cd07983 151 PKPFSRVVIVFGEPIHVPP----DAD-EEELEEYRLELEAAL 187 (189)
T ss_pred CCCCcceEEEEeCCEeeCC----CCC-HHHHHHHHHHHHHHh
Confidence 2342349999999998762 334 555566666665554
No 32
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=99.79 E-value=6.6e-21 Score=168.43 Aligned_cols=115 Identities=30% Similarity=0.427 Sum_probs=64.8
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcC----CCccEEEec----ccchhhhhhcCCeeEEecCChh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALG----RPIPAVTYS----LSRLSELISPIKTVRLTRDRAT 364 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~----~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~ 364 (515)
+++|+|.|++| +++|+|++|||+|++|.+++..++. +.+.+++++ .|.+++++...|+++++|++..
T Consensus 1 ~v~v~g~e~l~-----~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~r~~~~ 75 (132)
T PF01553_consen 1 KVEVEGLENLP-----KGGGVIFVSNHQSWLDGFALMALLQRSGPRRPRFVAKDELFKIPFLGWFLRRLGFIPIDRSNRK 75 (132)
T ss_dssp -----HHHHHH-----TT-EEEEEE----TTHHHHHHHHHTTT-HHH-EEEEECHHHH-TTTHHHHHEEEEE--CCHHHH
T ss_pred CCccCccccCC-----CCCCEEEEecCCCCCcchheeehhhhhccccceeEeeeccccchhhhhhhhhccceeeeeeccc
Confidence 57899999998 6789999999999999999998883 235677776 5889999999999999994433
Q ss_pred h----HHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEE
Q 042288 365 D----ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMS 412 (515)
Q Consensus 365 ~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~ 412 (515)
. ++.+.+.+++| .++||||||+++...+.+|++|+ .++++||+||+|+
T Consensus 76 ~~~~~~~~~~~~l~~~~~i~ifPEG~~~~~~~~~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 76 KNRKALKDIKEILRKGGSIVIFPEGTRSRSGELLPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp HHHHHHHHHHHHHHC---EEE-TT-S---B--B----HHHHHHHHHH----------
T ss_pred ccchhHHHHHHHhhhcceeeecCCccCcCCCccCCccHHHHHHHHHcCCccccccCC
Confidence 2 67778889998 99999999999998889999994 5569999999985
No 33
>PRK08238 hypothetical protein; Validated
Probab=99.79 E-value=4e-19 Score=188.78 Aligned_cols=173 Identities=21% Similarity=0.220 Sum_probs=123.6
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARA 107 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~ 107 (515)
....+||+||||+++|+.++++....+ +.+...+. .|..... ....+|+.+.. ..+++.+.+.
T Consensus 10 ~~pl~~DlDgTLi~td~l~e~~~~~l~--~~p~~~~~----l~~~~~~-----g~a~lK~~~a~-~~~~d~~~lp----- 72 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLLHESIFALLR--RNPLALLR----LPLWLLR-----GKAALKRRLAR-RVDLDVATLP----- 72 (479)
T ss_pred CCCEEEeCCCCccccchHHHHHHHHHH--hChHHHHH----HHHHHHh-----cHHHHHHHHHh-hcCCChhhCC-----
Confidence 457899999999999998888765443 23333221 1111111 11224443332 2233332221
Q ss_pred HhchhhcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC-cEEEeceEEEeCceeeeEEecCCccccccH
Q 042288 108 VLPKFYSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA-DMVIGTEICVYKGRSTGFVKSPGVLVGKNK 182 (515)
Q Consensus 108 ~~~~~~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-d~vigt~l~~~~G~~tG~i~~~~~~~g~~K 182 (515)
++|++.+ .++++| .++|+|+|++.++++++++ +|+ |.++|++.. .|| ++++|
T Consensus 73 ---------~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGlFd~Vigsd~~------------~~~-kg~~K 129 (479)
T PRK08238 73 ---------YNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGLFDGVFASDGT------------TNL-KGAAK 129 (479)
T ss_pred ---------CChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCEEEeCCCc------------ccc-CCchH
Confidence 4455554 566899 5577999999999999997 995 999999742 256 88999
Q ss_pred HHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceE-EccCc
Q 042288 183 AGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIV-FHDGR 244 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~~r 244 (515)
++++++++++ .+ ...+|||.+|+|+++.|++|++|||++++++.|+ ++||++. |....
T Consensus 130 ~~~l~~~l~~--~~-~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~-~~~~~~~~~~~~~ 188 (479)
T PRK08238 130 AAALVEAFGE--RG-FDYAGNSAADLPVWAAARRAIVVGASPGVARAAR-ALGPVERVFPPRP 188 (479)
T ss_pred HHHHHHHhCc--cC-eeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHH-HcCCcceecCCCc
Confidence 9999999875 23 3457999999999999999999999999999999 9999997 75433
No 34
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.79 E-value=1.2e-18 Score=161.98 Aligned_cols=171 Identities=20% Similarity=0.184 Sum_probs=115.6
Q ss_pred EEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHh
Q 042288 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVL 109 (515)
Q Consensus 30 lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~~ 109 (515)
+++|||||||+..+|.+.++..+. +.......+. ..+..+.+...+. ++ .....+++...+++. ++++
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~-~~~~~~~~~~------~~~~~g~i~~~~~-~~-~~~~~~~~~~~~~~~---~~~~ 68 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLL-GTNDEVIELT------RLAPSGRISFEDA-LG-RRLALLHRSRSEEVA---KEFL 68 (177)
T ss_pred CEEecCccccccchhhHHHHHHHh-CChHHHHHHH------HHHHCCCCCHHHH-HH-HHHHHhCCCCHHHHH---HHHH
Confidence 489999999999998776665432 2111111111 1222222222221 22 234567888765444 3344
Q ss_pred chhhcC-CCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEe-CceeeeEEec-CCccccccHHHH
Q 042288 110 PKFYSG-DLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVY-KGRSTGFVKS-PGVLVGKNKAGA 185 (515)
Q Consensus 110 ~~~~~~-~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~-~G~~tG~i~~-~~~~~g~~K~~~ 185 (515)
.+.+.. .-..+.++.++++| .++|+|+|++.+++++++. +|+++++++++.++ ||.+||+..+ +++ .+.+|.+.
T Consensus 69 ~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~K~~~ 146 (177)
T TIGR01488 69 ARQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNP-EGECKGKV 146 (177)
T ss_pred HhcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccC-CcchHHHH
Confidence 333221 12234555677899 5678999999999999998 99999999999995 8999998766 455 89999999
Q ss_pred HHHHhcCCCC--CceEEEeCCcCcHHHHhcc
Q 042288 186 LMKMLGDDEE--MPDIGLGDRKTDSLFLNLC 214 (515)
Q Consensus 186 l~~~~~~~~~--~~~~aygDS~~DlpmL~~a 214 (515)
++++..+.+. ..+++||||.+|+||++.|
T Consensus 147 l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 147 LKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 9998765322 3478999999999999875
No 35
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=99.76 E-value=2.4e-18 Score=191.03 Aligned_cols=161 Identities=17% Similarity=0.141 Sum_probs=110.9
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC---ccEEEe-c---ccchhhhhhcCCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP---IPAVTY-S---LSRLSELISPIKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~---~~~v~k-~---~~~~g~~~~~~~~i~idR~~~~~ 365 (515)
.++|.|.|+++... ..+.|+|+|+||+|++|++++..++.+. ...++. . .|++|++++..|++||+|+....
T Consensus 275 ~v~V~g~E~l~~~~-~~~~pvI~vpNHrS~lD~llL~~~l~~~~l~~p~iaag~nL~~p~~g~llr~~GaffIrR~~~~~ 353 (799)
T TIGR03703 275 GINVNNADRVRKLA-QKGHEIIYVPCHRSHMDYLLLSYVLYHEGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGN 353 (799)
T ss_pred ceEEechhhccccc-CCCCcEEEEECCCCchHHHHHHHHHhhcCCCCceEEechhhccHHHHHHHHHCCceEeecCCCcc
Confidence 46678999997200 0134999999999999999998776432 233433 3 68899999999999999976432
Q ss_pred ------H-HHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hc-------cCCcEEEEEEEcCccCccCcc---c
Q 042288 366 ------A-SMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AE-------LTDEVVPVAMSNRMSMFHGTT---A 423 (515)
Q Consensus 366 ------~-~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~-------~~~pVvPV~i~~~~~~~~~~~---~ 423 (515)
+ +.+.+.+++| ++.||||||||++|.+++||.|+ .+ .+++||||+|.|...+..... .
T Consensus 354 ~ly~~vl~eyi~~ll~~G~~v~iFpEGtRSrtGkll~pK~G~l~~a~~a~~~~~~~~v~IVPVsI~Yekv~E~~~y~~El 433 (799)
T TIGR03703 354 KLYSAVFREYLHELFAKGYSVEYFVEGGRSRTGRLLPPKTGMLAMTLQAMLRGIRRPITLVPVYIGYEHVMEVATYLKEL 433 (799)
T ss_pred hhHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCccchHHHHHHHHHHHhhccCCCCcEEEEEEEecccccchhHHHHHh
Confidence 2 2345667889 99999999999999999999993 22 269999999988643321110 0
Q ss_pred CCC-ccCCcc-------ccccCCCCeEEEEEeccccCccc
Q 042288 424 RGW-KGMDPF-------YFFMNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 424 ~~~-~~~~~~-------~~~~~p~~~v~V~~l~pi~~~~~ 455 (515)
.|. +..+.+ ..+.+.|. +.|.|++||+..++
T Consensus 434 ~G~~K~kEsl~~~l~~~~~l~~~G~-i~V~FGePIsl~~~ 472 (799)
T TIGR03703 434 RGKRKEKESVFGVLKTLRKLRNFGQ-GYVNFGEPINLNDY 472 (799)
T ss_pred cCCCccccCHHHHHHHHhccCCCce-EEEEeCCCccHHHH
Confidence 111 111111 11233455 99999999987654
No 36
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=99.76 E-value=2.5e-18 Score=191.00 Aligned_cols=161 Identities=17% Similarity=0.200 Sum_probs=112.1
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC---ccEEEec----ccchhhhhhcCCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP---IPAVTYS----LSRLSELISPIKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~---~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~ 365 (515)
.++|.|.|+++... ..+.|+|+|+||+|++|++++..++.+. +.++++. .|++|++++..|++||+|+....
T Consensus 285 ~i~V~g~e~L~~~~-~~~~~vI~v~NHrS~lD~llL~~~l~~~gl~~p~iAagenl~~p~lg~llr~~GaffIrR~~~~~ 363 (818)
T PRK04974 285 GINVHNAERVRQLA-QDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGN 363 (818)
T ss_pred ceEEcchhhhhhcc-cCCCCEEEEeCCCCchHHHHHHHHHhhcCCCCceEEehHHhcchHHHHHHHHCCceEeeCCCCch
Confidence 46688999997100 0234899999999999999998776543 4566665 68899999999999999986432
Q ss_pred -H-----H-HHHHHHHcC-CeEEecCCeeeCCCccccccch-h---hc-------cCCcEEEEEEEcCccCccCcc---c
Q 042288 366 -A-----S-MIEKLLEKG-DLVICPEGTTCREPFLLRFSAL-F---AE-------LTDEVVPVAMSNRMSMFHGTT---A 423 (515)
Q Consensus 366 -~-----~-~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G-f---~~-------~~~pVvPV~i~~~~~~~~~~~---~ 423 (515)
+ . .+.+.+++| ++.||||||||++|.+++||.| + .+ ..++||||+|.|...+..+.. .
T Consensus 364 ~ly~~vl~~yi~~ll~~G~~v~iFpEGtRSRtGkllppK~G~l~~a~~a~~~~~~~dv~IVPVsIsYekv~E~~~y~~el 443 (818)
T PRK04974 364 KLYSTVFREYLGELFARGYSVEYFVEGGRSRTGRLLQPKTGMLAMTLQAMLRGSRRPITLVPVYIGYEHVMEVGTYAKEL 443 (818)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCCcchhhhHHHHHHHHhhcccCCCcEEEEEEEeccchhhhHHHHHHh
Confidence 1 2 234567889 9999999999999999999999 3 22 247999999988543221110 0
Q ss_pred CCC-ccCCcccc-------ccCCCCeEEEEEeccccCccc
Q 042288 424 RGW-KGMDPFYF-------FMNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 424 ~~~-~~~~~~~~-------~~~p~~~v~V~~l~pi~~~~~ 455 (515)
.|. +..+.+|. ..+.|. +.|.|++||+..++
T Consensus 444 ~G~~K~kEsl~~il~~i~~~~~~G~-v~V~FGePisl~~~ 482 (818)
T PRK04974 444 RGAPKEKESLFQVLRGIRKLRNFGQ-GYVNFGEPIPLNDY 482 (818)
T ss_pred cCCCCcCcCHHHHHHHHhhcCCCce-EEEEeCCCccHHHH
Confidence 111 11122221 113355 99999999976553
No 37
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.
Probab=99.76 E-value=5.4e-18 Score=158.68 Aligned_cols=149 Identities=29% Similarity=0.391 Sum_probs=121.1
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCCh-
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRA- 363 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~- 363 (515)
.++.+++++|.++++ .++|+|+++||.|++|.+++......+..++++. .+++++++...|.++++|...
T Consensus 7 ~~~~~v~v~~~~~~~-----~~~~~i~~~nH~~~~D~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~v~~~~~~ 81 (184)
T cd07989 7 LLGVRVRVEGLENLP-----PKGPVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFKIPFLGWLLRLLGAIPIDRGNGR 81 (184)
T ss_pred eeceEEEEEccccCC-----CCCCEEEEECCcchHHHHHHHhhccCceEEEEhHHhhhCchHHHHHHHCCeEEEecCCch
Confidence 368899999999987 5789999999999999988877665567778775 488899999999999998763
Q ss_pred ---hhHHHHHHHHHcC-CeEEecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccc
Q 042288 364 ---TDASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFF 435 (515)
Q Consensus 364 ---~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~ 435 (515)
..++++.+.+++| .+++||||+++.++...+|+.|+ .+.++||+||.+.+....+... ..
T Consensus 82 ~~~~~~~~~~~~l~~g~~l~i~peg~~~~~~~~~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~~~------------~~ 149 (184)
T cd07989 82 SAREALREAIEALKEGESVVIFPEGTRSRDGELLPFKSGAFRLAKEAGVPIVPVAISGTWGSLPKG------------KK 149 (184)
T ss_pred hHHHHHHHHHHHHHCCCEEEEecCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEeChhhhCcCC------------CC
Confidence 3477888899999 89999999999888899999994 4579999999999954322111 23
Q ss_pred cCCCCeEEEEEeccccCcc
Q 042288 436 MNPSPAYEVTFLNKLPYEL 454 (515)
Q Consensus 436 ~~p~~~v~V~~l~pi~~~~ 454 (515)
..+...++|++++||.+++
T Consensus 150 ~~~~~~~~i~~~~pi~~~~ 168 (184)
T cd07989 150 LPRPGRVTVRIGEPIPPEG 168 (184)
T ss_pred cCCCCcEEEEEcCCcChhh
Confidence 3455569999999999875
No 38
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.73 E-value=8.4e-17 Score=155.02 Aligned_cols=189 Identities=19% Similarity=0.249 Sum_probs=127.9
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~ 106 (515)
..++++|||||||+++++ +..+... .+.......+ . ..+..+.+.... ..++ ....+.+.+.+.++++.+
T Consensus 13 ~~k~iiFD~DGTL~~~~~-~~~l~~~-~g~~~~~~~~-----~-~~~~~g~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 82 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAET-IDEIAKI-AGVEEEVSEI-----T-ERAMRGELDFKA-SLRE-RVALLKGLPVELLKEVRE 82 (219)
T ss_pred cCCEEEEeCcccCCCchH-HHHHHHH-hCCHHHHHHH-----H-HHHHcCCCCHHH-HHHH-HHHHhCCCCHHHHHHHHh
Confidence 457999999999999865 3333221 1100011111 0 111111121111 1222 233467877776665544
Q ss_pred HHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHH
Q 042288 107 AVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGA 185 (515)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~ 185 (515)
... +.+ -..+.++.++++| .++|+|++...+++++++. +|+++++++++.+++|.++|.+.++.+ .+..|.+.
T Consensus 83 ~~~---~~~-g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~k~~~ 156 (219)
T TIGR00338 83 NLP---LTE-GAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIV-DASYKGKT 156 (219)
T ss_pred cCC---cCC-CHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCccc-CCcccHHH
Confidence 321 111 1245566777899 6678999999999999998 999999999999999999999888765 56668888
Q ss_pred HHHHhcCCCC--CceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 186 LMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 186 l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
++.++...+. ..++++|||.+|+++++.|+.++++|+++.++..|.
T Consensus 157 ~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~ 204 (219)
T TIGR00338 157 LLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD 204 (219)
T ss_pred HHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence 8876654322 347899999999999999999999999998887765
No 39
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.72 E-value=1.1e-16 Score=151.86 Aligned_cols=185 Identities=18% Similarity=0.182 Sum_probs=115.9
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCC----CHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGM----KVPSIES 103 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~----~~~~l~~ 103 (515)
.++++|||||||+++++.+.++... .+......... ..+..+.+...+. . ......+.+. ..+++++
T Consensus 4 ~k~viFD~DGTLid~~~~~~~~~~~-~~~~~~~~~~~------~~~~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 74 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVMSSWEYLHRR-LETCGLAKKNA------ELFFSGRISYEEW-A-RLDASLWKRRSGRLRREEVEE 74 (201)
T ss_pred ceEEEEeCCCCCcCCccHHHHHHHH-hCchHHHHHHH------HHHHcCCCCHHHH-H-HHHHHHHhhcccCCCHHHHHH
Confidence 5789999999999988766555321 22111111110 1121222222221 1 1112334443 4555554
Q ss_pred HHHHHhchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEe-CceeeeEEecCCccc
Q 042288 104 VARAVLPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVY-KGRSTGFVKSPGVLV 178 (515)
Q Consensus 104 ~~~~~~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~-~G~~tG~i~~~~~~~ 178 (515)
..++. .++| +.++.++++| .++|+|++++.+++++++. +|++.++++.+..+ +|..++..... + .
T Consensus 75 ~~~~~-------~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~-~-~ 144 (201)
T TIGR01491 75 IFKEI-------SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVR-V-T 144 (201)
T ss_pred HHHhC-------CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeE-E-c
Confidence 33322 2444 4556777899 5678999999999999998 99999999998775 56666542110 1 1
Q ss_pred cccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 179 GKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
...|.+.++.+....+ ...+++||||.+|+++++.|+.++++||+++++++|+
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAK 199 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhcc
Confidence 2345555554433211 2347999999999999999999999999999999997
No 40
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.70 E-value=8.7e-17 Score=165.15 Aligned_cols=119 Identities=21% Similarity=0.172 Sum_probs=95.9
Q ss_pred HhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcC-----CCccEEEec----ccchhhhhhcCCeeEE
Q 042288 288 WALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALG-----RPIPAVTYS----LSRLSELISPIKTVRL 358 (515)
Q Consensus 288 ~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~-----~~~~~v~k~----~~~~g~~~~~~~~i~i 358 (515)
++.|+++++.| |+++ .++++|++|||+|++|.+++.+... ..+.+++|+ +|++||.+...|.|++
T Consensus 75 ~~~gvkv~v~G-e~l~-----~~~~~IiiaNH~S~~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~~Gw~~~~~g~I~v 148 (374)
T PLN02510 75 KINKTKVVFSG-DKVP-----PEERVLLIANHRTEVDWMYLWDLALRKGCLGYIKYVLKSSLMKLPVFGWAFHIFEFIPV 148 (374)
T ss_pred HhcCeEEEEEe-ecCC-----CCCcEEEEECCCchHHHHHHHHHHHhcCCCcccEEEEeHHHhhchHHHHHHHHcCCeee
Confidence 35899999999 7776 4689999999999999999875431 246789987 7999999999999999
Q ss_pred ecCChh---hHHHHHHHHHcC----CeEEecCCeeeCCCccccccchhhccCCcEEEEEEE
Q 042288 359 TRDRAT---DASMIEKLLEKG----DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMS 412 (515)
Q Consensus 359 dR~~~~---~~~~~~~~l~~G----~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~ 412 (515)
+|+... .++++.+.++++ .++|||||||+..+....++..+.+.++||+.-++.
T Consensus 149 ~R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~s~~~A~k~glPil~~vL~ 209 (374)
T PLN02510 149 ERKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQRSQKFAAEHGLPILNNVLL 209 (374)
T ss_pred eCCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCCccccchHHHHHHHcCCCcceeEEc
Confidence 998653 366677777764 589999999997776666776677888888877774
No 41
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.68 E-value=8.3e-16 Score=144.50 Aligned_cols=116 Identities=26% Similarity=0.409 Sum_probs=85.5
Q ss_pred HHHcCCCHHHHHHHHHHHhchh-hcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE--EEeceEEEe
Q 042288 91 ATFAGMKVPSIESVARAVLPKF-YSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM--VIGTEICVY 163 (515)
Q Consensus 91 ~~~~G~~~~~l~~~~~~~~~~~-~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~--vigt~l~~~ 163 (515)
..+.+++.++++.+.+. ..++ +.+.+.+ +.++.++++| .++|||||++.+++++++. +|++. ++||++ .+
T Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~v~~~~~-~~ 140 (192)
T PF12710_consen 64 ERLRGLSERYLEEIAKD-IEQYKLFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDNVIGNEL-FD 140 (192)
T ss_dssp HHHHTHHHHHHHHHHHH-HHHHHHCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGGEEEEEE-EC
T ss_pred HHHHHHHHHHHHHHHHh-hcccccCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEEEEEee-ee
Confidence 66788888888877765 3221 0111113 3444567889 6678999999999999998 99987 999999 54
Q ss_pred -C-ceeeeEEecCCccccccHHHHHHHH---hc-CCCCCceEEEeCCcCcHHHHh
Q 042288 164 -K-GRSTGFVKSPGVLVGKNKAGALMKM---LG-DDEEMPDIGLGDRKTDSLFLN 212 (515)
Q Consensus 164 -~-G~~tG~i~~~~~~~g~~K~~~l~~~---~~-~~~~~~~~aygDS~~DlpmL~ 212 (515)
+ +..+|++.+.++ | +|+++++++ .. ..+...+++||||.+|+|||+
T Consensus 141 ~~~~~~~~~~~~~~~--~-~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 141 NGGGIFTGRITGSNC--G-GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp TTCCEEEEEEEEEEE--S-HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cccceeeeeECCCCC--C-cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 3 567888887644 5 899999998 22 212456899999999999986
No 42
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=99.67 E-value=7.2e-17 Score=152.72 Aligned_cols=102 Identities=25% Similarity=0.177 Sum_probs=82.9
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC-----CccEEEec----ccchhhhhhcCCeeEEe
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR-----PIPAVTYS----LSRLSELISPIKTVRLT 359 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~-----~~~~v~k~----~~~~g~~~~~~~~i~id 359 (515)
+.|++++++|.++.+ .++++|++|||+|++|.+++.+++.+ .+.+++|+ +|++|+++...+.++++
T Consensus 7 ~~g~~i~v~G~~~~~-----~~~~~iiv~NH~s~~D~~~~~~~~~~~~~~~~~~~v~K~~l~~~p~~g~~~~~~~~i~v~ 81 (193)
T cd07990 7 LSGVKVVVYGDEPKL-----PKERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLKDSLKYPPLGGWGWQLGEFIFLK 81 (193)
T ss_pred ecCeEEEEEecCccC-----CCccEEEEEcCCcccCHHHHHHHHHHcCccceEEeeehhhhhcCChhhHHHhhCeeEEEE
Confidence 479999999999985 46799999999999999999888753 45788886 68899999999999999
Q ss_pred cCChhh---HHHHHHHHHc---C-CeEEecCCeeeCCCccccc
Q 042288 360 RDRATD---ASMIEKLLEK---G-DLVICPEGTTCREPFLLRF 395 (515)
Q Consensus 360 R~~~~~---~~~~~~~l~~---G-~l~IFPEGTrs~~~~l~~F 395 (515)
|+..++ +++..+.+++ | +++|||||||+..+.+.++
T Consensus 82 R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~~~~~ 124 (193)
T cd07990 82 RKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEKKERS 124 (193)
T ss_pred CChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHHHHHHH
Confidence 986544 4444455554 6 8999999999987766544
No 43
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.64 E-value=5.5e-16 Score=159.21 Aligned_cols=103 Identities=24% Similarity=0.173 Sum_probs=80.6
Q ss_pred HhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC-----CccEEEec----ccchhhhhhcCCeeEE
Q 042288 288 WALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR-----PIPAVTYS----LSRLSELISPIKTVRL 358 (515)
Q Consensus 288 ~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~-----~~~~v~k~----~~~~g~~~~~~~~i~i 358 (515)
+.+|+++++.|.+..... ..++++|++|||+|++|.+++....++ ...+++|+ +|++||.+...|.|++
T Consensus 63 ~~~Gvkv~V~gd~~~~~~--~g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv~Gw~~~~~~~IfI 140 (376)
T PLN02380 63 WWAGVKVQLYADEETFEL--MGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYVFL 140 (376)
T ss_pred HcCCeEEEEEecchhhcc--CCCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeHHHhhhccHHHHHHHHcCCEEe
Confidence 578999999997664200 013579999999999999998776543 25778887 7999999999999999
Q ss_pred ecCChhh---HHHHHHHHHc---C-CeEEecCCeeeCCCcc
Q 042288 359 TRDRATD---ASMIEKLLEK---G-DLVICPEGTTCREPFL 392 (515)
Q Consensus 359 dR~~~~~---~~~~~~~l~~---G-~l~IFPEGTrs~~~~l 392 (515)
||+...+ ++...+.+++ | .++|||||||...+.+
T Consensus 141 dR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k~ 181 (376)
T PLN02380 141 ERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKL 181 (376)
T ss_pred cCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCCchhh
Confidence 9987655 4555667776 5 7999999999976654
No 44
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=99.64 E-value=4.2e-16 Score=171.21 Aligned_cols=146 Identities=15% Similarity=0.136 Sum_probs=104.0
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcC----CCccEEEec----ccchhhhhhcCCeeEEecCChhh--H----HH-HHHHHH
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALG----RPIPAVTYS----LSRLSELISPIKTVRLTRDRATD--A----SM-IEKLLE 374 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~----~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~--~----~~-~~~~l~ 374 (515)
+.|+|+++||.|++|++++..++. ++..++++. .|++|++++..|++||+|+.+.+ . ++ +.+.++
T Consensus 628 ~~pvVfVpNHRS~lDyLLLsyvL~~~GL~~P~IAAGdNLL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk 707 (1108)
T PTZ00374 628 RVAVVLLPLHRSYIDFIIMTYLLAVMGLPLPHVCAGDDFLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVL 707 (1108)
T ss_pred CCcEEEEeCCccchHHHHHHHHHHhCCCCceEEEEchhhhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHh
Confidence 459999999999999999977764 233566665 68999999999999999987642 2 22 245678
Q ss_pred cC-CeEEecCCeeeCCCccccccchh----hcc---------CCcEEEEEEEcCccCccCcc---cCCC-ccCC-ccc--
Q 042288 375 KG-DLVICPEGTTCREPFLLRFSALF----AEL---------TDEVVPVAMSNRMSMFHGTT---ARGW-KGMD-PFY-- 433 (515)
Q Consensus 375 ~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~~---------~~pVvPV~i~~~~~~~~~~~---~~~~-~~~~-~~~-- 433 (515)
+| ++.+|||||||+++.++++|.|. .++ +++||||+|.|....-.... ..|- +..+ ..+
T Consensus 708 ~G~sVeiFpEGTRSRTGKLLpPK~GlLkmalda~l~g~~~v~dV~IVPVSIsYErVlE~elyakEl~G~kK~kEsl~~ll 787 (1108)
T PTZ00374 708 RRRPLEFFIEGTRSRTGKTMAPKLGLLKFICDTFYEGQQELDDVLIIPVSLSYDELLETTLYAKEQLGVSKPKENPGNLL 787 (1108)
T ss_pred CCCeEEEecCcCcCCCCCcccchhhHHHHHHHHHhhcccCCCCCEEEEEEEehhhhhhHHHHHHHhcCCCCCCCCHHHHH
Confidence 89 99999999999999999999993 222 78999999999643211110 0111 1111 111
Q ss_pred ----cccCCCCeEEEEEeccccCccc
Q 042288 434 ----FFMNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 434 ----~~~~p~~~v~V~~l~pi~~~~~ 455 (515)
.+.++.-++.|.|++|++..++
T Consensus 788 k~ir~L~~~~GrV~V~FGEPISLrey 813 (1108)
T PTZ00374 788 RARSLLKRRHGKIHVHIGEPVSLRSF 813 (1108)
T ss_pred HHHHHHhccCceEEEECCCCccHHHH
Confidence 1223334599999999987765
No 45
>smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.
Probab=99.64 E-value=7.3e-16 Score=132.82 Aligned_cols=101 Identities=31% Similarity=0.423 Sum_probs=85.5
Q ss_pred EEEEeCCCCCCcHHHHHHhcCC---CccEEEec----ccchhhhhhcCCeeEEecCChhh----HHHHHHHHHcC-CeEE
Q 042288 313 VLFICSHRTLLDPIFLSTALGR---PIPAVTYS----LSRLSELISPIKTVRLTRDRATD----ASMIEKLLEKG-DLVI 380 (515)
Q Consensus 313 ~IiVaNH~S~lD~~~l~~~~~~---~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~----~~~~~~~l~~G-~l~I 380 (515)
+|++|||+|++|.+++...+++ +..++++. .|++++++...|.++++|..... ++++.+.+++| +++|
T Consensus 1 ~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~i 80 (118)
T smart00563 1 ALVVANHQSFLDPLVLSALLPRKGGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGRLARAALREAVRLLRDGGWLLI 80 (118)
T ss_pred CEEEECCCchHHHHHHHHHcccccCceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCCEEEE
Confidence 4899999999999999998865 46777765 68889999999999999977522 55566677788 8999
Q ss_pred ecCCeeeCCCccccccchh----hccCCcEEEEEEEc
Q 042288 381 CPEGTTCREPFLLRFSALF----AELTDEVVPVAMSN 413 (515)
Q Consensus 381 FPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~ 413 (515)
||||++++...+.+|++|+ .+.++||+||++.|
T Consensus 81 fPeG~~~~~~~~~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 81 FPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred eCCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEec
Confidence 9999999888899999994 55689999999987
No 46
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.58 E-value=3e-14 Score=137.02 Aligned_cols=182 Identities=14% Similarity=0.053 Sum_probs=114.6
Q ss_pred EEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHhc
Q 042288 31 VVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAVLP 110 (515)
Q Consensus 31 avFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~~~ 110 (515)
++|||||||+..|+...++..+. +.....+. ..+..+.+ ..++.+...+++++....++ ..+++.
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~---~~~~~~~~------~~~~~g~~-----~~~e~~~~~~~~~~~~~~~~-~~~~~~ 66 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFA---PPEWEALK------DGVLSKTL-----SIQEGVGRMFGLLPSSLKEE-ITSFVL 66 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhC---cHHHHHHH------HHHHcCCc-----cHHHHHHHHHhhCCCchHHH-HHHHHH
Confidence 79999999999888443332221 11111111 11111111 13333455566665444332 233332
Q ss_pred hhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcC-CcEEEeceEEEeCceeeeEEec-------CCccc
Q 042288 111 KFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLG-ADMVIGTEICVYKGRSTGFVKS-------PGVLV 178 (515)
Q Consensus 111 ~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lG-id~vigt~l~~~~G~~tG~i~~-------~~~~~ 178 (515)
+. ..++| +++++++++| .++|+|+|++.+++++++. ++ .+.++|+++.+.++.+++.... .+|
T Consensus 67 ~~--~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~c-- 141 (214)
T TIGR03333 67 ET--AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQC-- 141 (214)
T ss_pred hc--CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCC--
Confidence 21 23455 5666778889 6678999999999999997 64 5788999999887777765542 234
Q ss_pred cccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCce
Q 042288 179 GKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPI 238 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i 238 (515)
|..|..+++++... ...++++|||.+|+++++.|+..++-+ .|..+.+ +++=+.
T Consensus 142 g~~K~~~l~~~~~~--~~~~i~iGDg~~D~~~a~~Ad~~~ar~---~l~~~~~-~~~~~~ 195 (214)
T TIGR03333 142 GCCKPSLIRKLSEP--NDYHIVIGDSVTDVEAAKQSDLCFARD---YLLNECE-ELGLNH 195 (214)
T ss_pred CCCHHHHHHHHhhc--CCcEEEEeCCHHHHHHHHhCCeeEehH---HHHHHHH-HcCCCc
Confidence 67799999987654 455788999999999999999865544 2333444 444443
No 47
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.
Probab=99.56 E-value=2.8e-14 Score=134.51 Aligned_cols=160 Identities=18% Similarity=0.185 Sum_probs=120.4
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhc-CCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL-GRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~-~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
+++++|.|+++..- ..++|+|+++||+|++|.+...... +.++..+.++ .+.+++++. ..|..+|+|+ ..
T Consensus 3 ~~~i~~~e~l~~~~-~~~~~~il~~~H~g~~e~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~~~g~~~i~~~--~~ 79 (192)
T cd07984 3 RVEREGLEHLEAAL-AKGKGVILLTAHFGNWELAGLALALLGYPVTVVYRPLKNPLLDRLITRGRERFGARLIPRG--GG 79 (192)
T ss_pred eeEecCHHHHHHHH-HcCCCEEEEcccchHHHHHHHHHHhcCCCeeEEEECCCCHHHHHHHHHHHHhcCCeeEcCC--ch
Confidence 56788888875100 0257999999999999998776665 5667778776 566777665 3578889887 46
Q ss_pred HHHHHHHHHcC-CeEEecCCeeeCCC-cccc-------ccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTCREP-FLLR-------FSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs~~~-~l~~-------Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
++.+.+.|++| .++|||||+++..+ ...+ |+.|+ ..+++||+|+.+.+..
T Consensus 80 ~~~~~~~l~~g~~v~i~pD~~~~~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~----------------- 142 (192)
T cd07984 80 LRELIRALKKGEIVGILPDQDPGRKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP----------------- 142 (192)
T ss_pred HHHHHHHHhCCCEEEEEeCCCCCCCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC-----------------
Confidence 77888999999 99999999998654 4444 58883 4579999999997642
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECT 482 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t 482 (515)
++. ++|+|++|+++. ...+.+++++++.+.+++.......
T Consensus 143 -----~~~-~~i~~~~~i~~~----~~~~~~~~~~~~~~~lE~~i~~~P~ 182 (192)
T cd07984 143 -----GGG-YRIEFEPPLENP----PSEDVEEDTQRLNDALEAAIREHPE 182 (192)
T ss_pred -----CCC-EEEEEeCCCCCC----CCCCHHHHHHHHHHHHHHHHHhCch
Confidence 123 899999999876 2577889999998888887654443
No 48
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed
Probab=99.54 E-value=6.8e-15 Score=157.58 Aligned_cols=186 Identities=15% Similarity=0.092 Sum_probs=122.8
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC----CccEEEec---ccchhhhhhcCCeeEEecC
Q 042288 289 ALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR----PIPAVTYS---LSRLSELISPIKTVRLTRD 361 (515)
Q Consensus 289 ~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~----~~~~v~k~---~~~~g~~~~~~~~i~idR~ 361 (515)
++.+++...+.+.+... ..+.|.|+++||.|++|.+++..+++. +..+++-. .|.+|.+++..|.+|+-|+
T Consensus 95 ~Y~v~v~~~~~~~lr~~--~~~~pvIfvp~HrS~lDylllsyvL~~~~l~~~~~~ag~nl~~~~lg~~lr~~GafFirRs 172 (621)
T PRK11915 95 AYDVLVDEDQITQLRKL--DRKATLAFAFSHRSYLDGMLLPEVILANRLSPALTFGGANLNFFPMGAWAKRTGAIFIRRQ 172 (621)
T ss_pred HHeEEeCHHHHHHHHHh--ccCCCEEEEeccccccHHHHHHHHHHHcCCCCceeehhhhhcchhHHHHHHhCCcEEeccC
Confidence 34555665665554210 046799999999999999999876532 12233322 6778999999999999887
Q ss_pred Chhh------H-HHHHHHHHcC-CeEEecCCeeeCCCccccccchh-h----------ccCCcEEEEEEEcCccCccCcc
Q 042288 362 RATD------A-SMIEKLLEKG-DLVICPEGTTCREPFLLRFSALF-A----------ELTDEVVPVAMSNRMSMFHGTT 422 (515)
Q Consensus 362 ~~~~------~-~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf-~----------~~~~pVvPV~i~~~~~~~~~~~ 422 (515)
.... + +-+...+++| ++.+|||||||++|.+++=|-|. . ..+++||||+|.|.+.+-....
T Consensus 173 f~~~~LY~~vl~eYi~~ll~~G~~le~F~EG~RSRtGkll~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~YDrV~E~~~y 252 (621)
T PRK11915 173 TKDIPVYRFVLRAYAAQLVQNHVNLTWSIEGGRTRTGKLRPPVFGILRYITDAVDEIDGPEVYLVPTSIVYDQLHEVEAM 252 (621)
T ss_pred CCCchHHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHhcCCCCCeEEEEEEEeecccccHHHH
Confidence 6543 2 4456678889 99999999999999999988883 1 3578999999999754322110
Q ss_pred ---c-CCCccCCcc-c------cccCCCCeEEEEEeccccCccccCC--------CCCHHHHHHHHHHHHHHH
Q 042288 423 ---A-RGWKGMDPF-Y------FFMNPSPAYEVTFLNKLPYELTCSA--------GKSSHDVANYIQRLIATS 476 (515)
Q Consensus 423 ---~-~~~~~~~~~-~------~~~~p~~~v~V~~l~pi~~~~~~~~--------~~~~~~la~~v~~~ia~~ 476 (515)
. ++-+-.+.+ | .+.++.-.+.|.|++|++..++..+ +...+.++.+|...|.+.
T Consensus 253 ~~El~G~~K~~Esl~~l~~~~~~l~~~~G~i~V~FgePisL~~~l~~~~~~~~~~~~~v~~La~~V~~~In~~ 325 (621)
T PRK11915 253 TTEAYGAVKRPEDLRFLVRLARQQGERLGRAYLDFGEPLPLRKRLQELRADKSGTGSEIERIALDVEHRINRA 325 (621)
T ss_pred HHHhcCCCCCccHHHHHHHHHHHHhhcCceEEEECCCCccHHHHHhhhccCcccchhHHHHHHHHHHHHHhhc
Confidence 0 111111111 1 1222334599999999988765211 123456777777666654
No 49
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.50 E-value=1.9e-13 Score=131.90 Aligned_cols=188 Identities=14% Similarity=0.076 Sum_probs=115.2
Q ss_pred eEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 042288 29 DTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVARAV 108 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~ 108 (515)
.+++|||||||++.++.. .+... ..... ...+ ...+..+.+..++. ++.+ ...+.+...+++.+...
T Consensus 4 ~~vifDfDgTi~~~d~~~-~~~~~-~~~~~-~~~i------~~~~~~g~~~~~~~-~~~~-~~~l~~~~~~~~~~~~~-- 70 (219)
T PRK09552 4 IQIFCDFDGTITNNDNII-AIMKK-FAPPE-WEEL------KDDILSQELSIQEG-VGQM-FQLLPSNLKEEIIQFLL-- 70 (219)
T ss_pred cEEEEcCCCCCCcchhhH-HHHHH-hCHHH-HHHH------HHHHHhCCcCHHHH-HHHH-HHhCCCCchHHHHHHHH--
Confidence 489999999999988754 22111 11001 1111 01111122222221 3222 23344433344443222
Q ss_pred hchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCcc-----
Q 042288 109 LPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVL----- 177 (515)
Q Consensus 109 ~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~----- 177 (515)
.+ -.++| +.+++++++| .++|||+++..+++++.+. + + +.++|++..+.++.++.....+ |.
T Consensus 71 -~~---~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p-~~~~~~~ 143 (219)
T PRK09552 71 -ET---AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHP-CDEHCQN 143 (219)
T ss_pred -hC---CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCC-ccccccc
Confidence 11 12444 5666778899 6678999999999999998 6 5 4688998887666555433322 10
Q ss_pred -ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceE-Ecc
Q 042288 178 -VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIV-FHD 242 (515)
Q Consensus 178 -~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~ 242 (515)
.|..|.+.++++... ...++++|||.+|+++.+.|+..++. ..|...++ +++|+.+ |++
T Consensus 144 ~~~~~K~~~l~~~~~~--~~~~i~iGDs~~Di~aa~~Ag~~~a~---~~l~~~~~-~~~~~~~~~~~ 204 (219)
T PRK09552 144 HCGCCKPSLIRKLSDT--NDFHIVIGDSITDLEAAKQADKVFAR---DFLITKCE-ELGIPYTPFET 204 (219)
T ss_pred cCCCchHHHHHHhccC--CCCEEEEeCCHHHHHHHHHCCcceeH---HHHHHHHH-HcCCCccccCC
Confidence 145699988886544 45689999999999999999997662 25556777 8999976 654
No 50
>PLN02954 phosphoserine phosphatase
Probab=99.49 E-value=6.3e-13 Score=128.48 Aligned_cols=176 Identities=17% Similarity=0.155 Sum_probs=109.2
Q ss_pred CCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHcCCCHHHHHHHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFAGMKVPSIESVAR 106 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~l~~~~~ 106 (515)
.+++++|||||||++.++ +...... .+......... ..+..+.+...+. ++..+ ..+. .+.+++++..+
T Consensus 11 ~~k~viFDfDGTL~~~~~-~~~~~~~-~g~~~~~~~~~------~~~~~g~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~ 79 (224)
T PLN02954 11 SADAVCFDVDSTVCVDEG-IDELAEF-CGAGEAVAEWT------AKAMGGSVPFEEA-LAARL-SLFK-PSLSQVEEFLE 79 (224)
T ss_pred cCCEEEEeCCCcccchHH-HHHHHHH-cCChHHHHHHH------HHHHCCCCCHHHH-HHHHH-HHcC-CCHHHHHHHHH
Confidence 468999999999999766 3333211 11111111110 1121222322221 22222 2232 24455544333
Q ss_pred HHhchhhcCCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEEe-CceeeeEEecC-Cccc
Q 042288 107 AVLPKFYSGDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICVY-KGRSTGFVKSP-GVLV 178 (515)
Q Consensus 107 ~~~~~~~~~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~~-~G~~tG~i~~~-~~~~ 178 (515)
+. ...++|. .+++++++| ..+|+|++++.+++++++. +|++ +++++.+.+. +|.++|..... .| .
T Consensus 80 ~~-----~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~ 152 (224)
T PLN02954 80 KR-----PPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTS-R 152 (224)
T ss_pred Hc-----cCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCccc-C
Confidence 31 2235555 445677899 5678999999999999998 9996 6999998885 78888865432 24 5
Q ss_pred cccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceee
Q 042288 179 GKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
+..|.+.++.+....+...++++|||.+|+.+.+.++..+.+
T Consensus 153 ~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~ 194 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFI 194 (224)
T ss_pred CccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEE
Confidence 677998888876653334588899999999997776666555
No 51
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.48 E-value=2.6e-13 Score=123.06 Aligned_cols=169 Identities=18% Similarity=0.200 Sum_probs=116.3
Q ss_pred CCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcc-cCcccHHHHHHHHHHHcCCCHHHHHHH
Q 042288 26 REKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYY-YVSESAGIRVLIFATFAGMKVPSIESV 104 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-l~~~~~~~~~~~~~~~~G~~~~~l~~~ 104 (515)
++..+++||+|-|+++ +.....+..++ +..+-.... ...++.. +..++ ++++. ..+++|..++-.+
T Consensus 14 ~~~~aVcFDvDSTvi~-eEgIdelA~~~-G~~~~Va~~-------T~rAMng~~~F~e-aL~~R-l~llqp~~~qv~~-- 80 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQ-EEGIDELAAYC-GVGEAVAEV-------TRRAMNGEADFQE-ALAAR-LSLLQPLQVQVEQ-- 80 (227)
T ss_pred HhcCeEEEecCcchhH-HhhHHHHHHHh-CchHHHHHH-------HHHHhCCCCcHHH-HHHHH-HHHhcccHHHHHH--
Confidence 4578999999999999 45577776543 212212221 3333442 23233 24433 3477886544333
Q ss_pred HHHHhchhhcCCCcH---HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE--EEeceEEEe-Cceeee-EEecCCc
Q 042288 105 ARAVLPKFYSGDLHP---ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM--VIGTEICVY-KGRSTG-FVKSPGV 176 (515)
Q Consensus 105 ~~~~~~~~~~~~~~~---~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~--vigt~l~~~-~G~~tG-~i~~~~~ 176 (515)
+..+. ++.+.| +....|+++| +++++||++..+++|++.+ ||++. ++++.++++ +|+++| ...+|-.
T Consensus 81 ---~v~~~-k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pts 155 (227)
T KOG1615|consen 81 ---FVIKQ-KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTS 155 (227)
T ss_pred ---HHhcC-CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccc
Confidence 33221 233444 4555788999 7889999999999999998 99987 999999996 899988 6777654
Q ss_pred cccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhc
Q 042288 177 LVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNL 213 (515)
Q Consensus 177 ~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~ 213 (515)
.+.+|.+.|+...+..+...+..+||+.+|+++..-
T Consensus 156 -dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 156 -DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred -cCCccHHHHHHHHhCCChheeEEecCCccccccCCc
Confidence 788999999987664322346889999999998876
No 52
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.39 E-value=8.5e-12 Score=118.81 Aligned_cols=123 Identities=17% Similarity=0.170 Sum_probs=89.5
Q ss_pred HcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEe-CceeeeEE
Q 042288 93 FAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVY-KGRSTGFV 171 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~-~G~~tG~i 171 (515)
-.|++.++++++.+..-. .+.+ .+.++.++++..++|+|+++..+++++.++ +|++.++++.+.+. +|.++|..
T Consensus 52 ~~~~~~~~i~~~~~~~~~---~pg~-~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~ 126 (205)
T PRK13582 52 EHGLGLADIQEVIATLDP---LPGA-VEFLDWLRERFQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD 126 (205)
T ss_pred HcCCCHHHHHHHHHhCCC---CCCH-HHHHHHHHhcCCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc
Confidence 347888888765554321 1111 345556666645577999999999999998 99998999988885 67777754
Q ss_pred ecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCC
Q 042288 172 KSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKV 226 (515)
Q Consensus 172 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 226 (515)
. . .++.|...++++-.. ...++++|||.+|+++.+.++.++.++++..+
T Consensus 127 ~---~-~p~~k~~~l~~~~~~--~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~ 175 (205)
T PRK13582 127 L---R-QPDGKRQAVKALKSL--GYRVIAAGDSYNDTTMLGEADAGILFRPPANV 175 (205)
T ss_pred c---c-ccchHHHHHHHHHHh--CCeEEEEeCCHHHHHHHHhCCCCEEECCCHHH
Confidence 2 1 345687777765433 35688999999999999999999998886543
No 53
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]
Probab=99.23 E-value=1.6e-11 Score=115.40 Aligned_cols=136 Identities=16% Similarity=0.134 Sum_probs=99.8
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEe-------------cccchhhhhhcCCeeEEecCCh---hhHHHHHHH
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTY-------------SLSRLSELISPIKTVRLTRDRA---TDASMIEKL 372 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k-------------~~~~~g~~~~~~~~i~idR~~~---~~~~~~~~~ 372 (515)
++.|.|-||||+|.+|-+.+.++++.+..+-.+ ..++...+++...|+++.|+.. +.++.+.+.
T Consensus 67 ~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~~S~fFslGkclPi~RG~GvYQ~gmd~~i~k 146 (286)
T KOG2847|consen 67 PNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPFHSNFFSLGKCLPIVRGEGVYQKGMDFAIEK 146 (286)
T ss_pred CCCCeEEEecchhccCCceeEEEechhhhcchhhhheehhhhhchhccHHHHHHHhcCceEeeeccCccccccHHHHHHh
Confidence 578999999999999988877776533222111 1477788888889999999765 348888999
Q ss_pred HHcC-CeEEecCCeee-CCCccccccchh--hccCCcE----EEEEEEc-CccCccCcccCCCccCCccccccCCCCeEE
Q 042288 373 LEKG-DLVICPEGTTC-REPFLLRFSALF--AELTDEV----VPVAMSN-RMSMFHGTTARGWKGMDPFYFFMNPSPAYE 443 (515)
Q Consensus 373 l~~G-~l~IFPEGTrs-~~~~l~~Fk~Gf--~~~~~pV----vPV~i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~ 443 (515)
|..| -+.|||||..+ .+..+++||-|. .-+.+|. +|+.-.+ .+.+|.+-. ...+++.+++
T Consensus 147 Ln~g~WVHiFPEGkV~q~~~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi~P~~~p-----------~vp~~Gk~vt 215 (286)
T KOG2847|consen 147 LNDGSWVHIFPEGKVNQMEKEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDIMPEAPP-----------YVPRFGKTVT 215 (286)
T ss_pred cCCCCeEEECCCceeeccccchhheeccceeeeecCCCCCEEeehhhhhHHHhCccCCC-----------ccCCCCCEEE
Confidence 9999 89999999998 778899999995 2333443 4555555 333444310 4567788899
Q ss_pred EEEeccccCccc
Q 042288 444 VTFLNKLPYELT 455 (515)
Q Consensus 444 V~~l~pi~~~~~ 455 (515)
|.+++|++.++.
T Consensus 216 V~IG~P~~~~d~ 227 (286)
T KOG2847|consen 216 VTIGDPINFDDV 227 (286)
T ss_pred EEeCCCcchhHH
Confidence 999999987643
No 54
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.22 E-value=4.9e-10 Score=104.76 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=84.1
Q ss_pred cCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe-Ccee
Q 042288 94 AGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY-KGRS 167 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~-~G~~ 167 (515)
.+.+.+++.+..++. + +.+. ..+.++.++++| ..+|+|++....++++.+. +|+ +.+++++..++ +|++
T Consensus 57 ~~~~~~~~~~~~~~~-~--l~~g-~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~ 131 (188)
T TIGR01489 57 SGLKEDEILEVLKSA-P--IDPG-FKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRH 131 (188)
T ss_pred cCCCHHHHHHHHHhC-C--CCcc-HHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcE
Confidence 466777777655441 1 1111 234555677888 6678999999999999997 885 47899988886 6888
Q ss_pred eeEEec----CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 168 TGFVKS----PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 168 tG~i~~----~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
++.... ..+..|..|.+.++++.... ...++++|||.+|+++.+.|+..++
T Consensus 132 ~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~-~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 132 IVWPHHCHGCCSCPCGCCKGKVIHKLSEPK-YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred EEecCCCCccCcCCCCCCHHHHHHHHHhhc-CceEEEECCCcchhchHhcCCcccc
Confidence 876543 11125667988888876542 2457899999999999998876654
No 55
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=99.09 E-value=8.4e-11 Score=114.14 Aligned_cols=180 Identities=10% Similarity=-0.073 Sum_probs=125.7
Q ss_pred cEEEEeCCCCCCcHHHHHHhcCC--CccEEEecccchhhhhhcCCeeEEecCChhhHHHHHH-----HHHcC---CeEEe
Q 042288 312 GVLFICSHRTLLDPIFLSTALGR--PIPAVTYSLSRLSELISPIKTVRLTRDRATDASMIEK-----LLEKG---DLVIC 381 (515)
Q Consensus 312 ~~IiVaNH~S~lD~~~l~~~~~~--~~~~v~k~~~~~g~~~~~~~~i~idR~~~~~~~~~~~-----~l~~G---~l~IF 381 (515)
+.-..+.|.|..|-.++-+.... .+....+++|.++........+++.|....+++...+ .++.| +|++|
T Consensus 8 ~~~~s~p~ss~~d~~~~~s~s~~s~v~~~~~~~~~~~~r~~~y~~~~l~~~~~~ds~k~tV~~i~~~~~~~~~~~qIll~ 87 (412)
T KOG4666|consen 8 LNSNSNPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGTMGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLL 87 (412)
T ss_pred ccccCCCCccccccchhhhcccHHHHHHhhcccCCchhhhhhhccceeccCCChHHHHHHHHHHHHhhhccCCCceeeee
Confidence 43444558888886665443210 1122334588899988888899998887766544333 23445 79999
Q ss_pred cCCeeeCCCccccccchhhccCCcEEEEEEEcCccCccCcccCCCccCCccccccCC-CCeEEEEEeccccCccccCCCC
Q 042288 382 PEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNP-SPAYEVTFLNKLPYELTCSAGK 460 (515)
Q Consensus 382 PEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~v~V~~l~pi~~~~~~~~~~ 460 (515)
||||++ .+.-|++|.+-.++|+|||.++|....-.-+-|.+..+....|+.++. ...+.+.|.+...|++. ++.
T Consensus 88 ~~~~C~---~~~~Fk~~~~~P~~~~q~~~l~y~n~~~~~t~Wq~~~~v~~~~~~~~~l~~~~~~~~i~~~~P~~e--e~~ 162 (412)
T KOG4666|consen 88 YYLICR---VFTLFSAPYRGPEEEEDEGGVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRD--SDM 162 (412)
T ss_pred eccceE---EEEEecCCccCCCCCcCcceEeccccccceeccccchHHHHHHHHHHHHHhheeEEEEeccCCChh--hhc
Confidence 999999 888999999999999999999995432211101111123344544332 34589999988777642 356
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHc-cC
Q 042288 461 SSHDVANYIQRLIATSLSYECTSFTRKDKYRALA-GN 496 (515)
Q Consensus 461 ~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~~~~-~~ 496 (515)
++.-.+..++..|+++++++.|++|.+|...+++ |+
T Consensus 163 d~~~~at~v~~~maealg~~vtd~t~edc~l~vs~gq 199 (412)
T KOG4666|consen 163 DSNPKTTSTEINMAEALGTEVTDRTGEDCSLHVSYGQ 199 (412)
T ss_pred CCcccchhHHHHHHHhhCCCCCCCchHHHHHHHhhcc
Confidence 6778999999999999999999999999999886 54
No 56
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.90 E-value=1e-08 Score=101.14 Aligned_cols=120 Identities=14% Similarity=0.110 Sum_probs=88.5
Q ss_pred HHHHcCC--CHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEE
Q 042288 90 FATFAGM--KVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICV 162 (515)
Q Consensus 90 ~~~~~G~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~ 162 (515)
..++.|. +.++++++.++.--. +.+ -..+.++.++++| .++|+|||+...+++++++ +|++ +++++++.+
T Consensus 98 ~~l~~~~~~~~e~i~~~v~~~~l~-l~p-G~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f 174 (277)
T TIGR01544 98 HGLLVQQAFPKAKIKEIVAESDVM-LKD-GYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDF 174 (277)
T ss_pred HHHHhcCCCCHHHHHHHHhhcCCc-cCc-CHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEE
Confidence 4456665 999999877632111 111 3357777888999 7788999999999999998 8984 899999999
Q ss_pred e-CceeeeEEecCCccccccHHHHHHH----HhcC-CCCCceEEEeCCcCcHHHHhcc
Q 042288 163 Y-KGRSTGFVKSPGVLVGKNKAGALMK----MLGD-DEEMPDIGLGDRKTDSLFLNLC 214 (515)
Q Consensus 163 ~-~G~~tG~i~~~~~~~g~~K~~~l~~----~~~~-~~~~~~~aygDS~~DlpmL~~a 214 (515)
+ ||.+|| ..+|.+ ...+|.+.+.+ .++. .+...+++.|||.+|++|-.-+
T Consensus 175 ~~dGvltG-~~~P~i-~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 175 DEDGVLKG-FKGPLI-HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred CCCCeEeC-CCCCcc-cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 4 899999 466654 67788875543 3331 1124478999999999998766
No 57
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.87 E-value=5.7e-08 Score=93.85 Aligned_cols=166 Identities=18% Similarity=0.206 Sum_probs=96.5
Q ss_pred EEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHH-HHHHHHHH-HcCCCHHHHHHHHHH
Q 042288 30 TVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAG-IRVLIFAT-FAGMKVPSIESVARA 107 (515)
Q Consensus 30 lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~~~~~~~~-~~G~~~~~l~~~~~~ 107 (515)
+++||||+||++.||- .++... +....+...+.. .++ ...+.. +.+++..+ -.|.+.+++.+..+.
T Consensus 2 LvvfDFD~TIvd~dsd-~~v~~~-l~~~~~~~~l~~--~~~--------~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ 69 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD-DWVIEL-LPPEELPEELRE--SYP--------KGGWTEYMDRVLQLLHEQGVTPEDIRDALRS 69 (234)
T ss_pred EEEEeCCCCccCCccH-HHHHHh-cCCcccHHHHHH--hcc--------ccchHHHHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 7999999999999884 454322 221222122211 010 012222 22222222 348999999886665
Q ss_pred HhchhhcCCCcHHHHHHHH--hCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe-Cceee-eEEecCCcc-
Q 042288 108 VLPKFYSGDLHPETWRVFS--SCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY-KGRST-GFVKSPGVL- 177 (515)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~--~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~-~G~~t-G~i~~~~~~- 177 (515)
. + +.+.+ .++++.+. +.| .++|+|-|.+++++.+.+. .|+ +.|++++..++ +|+++ .....+.|.
T Consensus 70 i-p--~~pgm-~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 70 I-P--IDPGM-KELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSL 144 (234)
T ss_pred C-C--CCccH-HHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCc
Confidence 4 3 11111 34444552 357 6678999999999999997 886 46789998886 67765 222222231
Q ss_pred --ccccHHHHHHHHhcCC---C--CCceEEEeCCcCcHHHHh
Q 042288 178 --VGKNKAGALMKMLGDD---E--EMPDIGLGDRKTDSLFLN 212 (515)
Q Consensus 178 --~g~~K~~~l~~~~~~~---~--~~~~~aygDS~~DlpmL~ 212 (515)
.+-=|-..|+++...+ + ....++.||+.||..-..
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 1113666777665541 2 123677899999986544
No 58
>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]
Probab=98.77 E-value=2.1e-08 Score=102.19 Aligned_cols=78 Identities=26% Similarity=0.275 Sum_probs=61.0
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCCC-----ccEEEec----ccchhhhhhcCCeeEEecCChhh---HHHHHHHHHcC
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGRP-----IPAVTYS----LSRLSELISPIKTVRLTRDRATD---ASMIEKLLEKG 376 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~~-----~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~---~~~~~~~l~~G 376 (515)
.+.++|++|||+|..|-+.+.....+. ...+.|+ +|.+||.+...|-||++|+-..+ +.+..+.+++-
T Consensus 69 ~~e~alli~NH~~~~Dwl~~w~~~~~~G~l~~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~~~l~~~~k~l~~~ 148 (346)
T KOG1505|consen 69 GKERALLIANHQSEVDWLYLWTYAQRKGVLGNVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDEKTLISLLKHLKDS 148 (346)
T ss_pred CCCceEEEeccccccchhhHHHHHhcCCchhhhhHHHhhHHHhCcchheeeeecceEEEecchhhhHHHHHHHHHHhccC
Confidence 367899999999999999988665432 2345555 79999999999999999986655 55566666653
Q ss_pred ----CeEEecCCee
Q 042288 377 ----DLVICPEGTT 386 (515)
Q Consensus 377 ----~l~IFPEGTr 386 (515)
.+++||||||
T Consensus 149 ~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 149 PDPYWLLLFPEGTR 162 (346)
T ss_pred CCceEEEEecCCCc
Confidence 6999999994
No 59
>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.77 E-value=1.3e-08 Score=102.69 Aligned_cols=207 Identities=15% Similarity=0.108 Sum_probs=130.7
Q ss_pred HHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccch----hhhhhcCCeeE
Q 042288 284 YYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRL----SELISPIKTVR 357 (515)
Q Consensus 284 ~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~----g~~~~~~~~i~ 357 (515)
+.+-+.+-.+++..+.++.+ ..+.+-|+||.|.+|.+++... +...+... -+.+ ..+......+.
T Consensus 116 ~llsra~~~~i~~~~~~~~~------~~g~i~v~nh~Sp~d~~vls~~---~~~~~v~q~~~~~v~viq~~~~~~s~~~~ 186 (354)
T KOG2898|consen 116 RLLSRAKSLRISFHDELLLF------PEGGICVANHFSPWDVLVLSVD---NCYALVGQVHGGLVGVIQLALSRASLHFW 186 (354)
T ss_pred hHHHHHhhhhhcccChhhcC------CCCCCceecccCceeEEEeccc---cchheeeecccceEEEeeehhhhhchhhh
Confidence 44445555666677766665 2346899999999999888764 22333332 1221 22233345555
Q ss_pred EecCChhh----HHHHHHHHHcC---CeEEecCCeeeCCCcccccc-chhhccCCcEEEEEEEcCccCccCc-ccCCCcc
Q 042288 358 LTRDRATD----ASMIEKLLEKG---DLVICPEGTTCREPFLLRFS-ALFAELTDEVVPVAMSNRMSMFHGT-TARGWKG 428 (515)
Q Consensus 358 idR~~~~~----~~~~~~~l~~G---~l~IFPEGTrs~~~~l~~Fk-~Gf~~~~~pVvPV~i~~~~~~~~~~-~~~~~~~ 428 (515)
..|....+ .++..++..++ ++++|||||..++..+..|+ +|-++.+..|.|++|+|.......- .......
T Consensus 187 f~~~e~~d~~~~~~~~~e~~~~~~~~~ii~fpegtCinn~~~~~fk~k~~~e~~~~i~pvaik~~~~~~~~f~~s~~~s~ 266 (354)
T KOG2898|consen 187 FERLEFTDRQVVAKRLAEHVWNERKEPILLFPEGTCINNTKVMQFKLKGSFEEGVKIYPVAIKYDPRFGDAFWNSPELSF 266 (354)
T ss_pred hhcchhhhhHhhhhhhhHHHhcCCCCcEEEeecceeeCCceeEEEecCCChhhcceeeeeeeecCccccccccCCccccH
Confidence 56655444 24455555554 79999999999999999999 7888999999999999964421110 0000000
Q ss_pred CCccccccC-CCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHccCCCccccchhh
Q 042288 429 MDPFYFFMN-PSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYRALAGNDGTVVEKPAK 506 (515)
Q Consensus 429 ~~~~~~~~~-p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~~~~~~~~~~~~~~~~ 506 (515)
...++.+.. ......+.+++|+... ++++.-++++++.+.++...+.....+...-| ++.-.++-++++-+
T Consensus 267 ~~~l~~~~ts~~~v~~i~~l~~~~r~----~~et~t~~a~~v~~~ig~~~gl~~~~~dg~lk---~~~~~~~~v~~~~~ 338 (354)
T KOG2898|consen 267 TRYLLELMTSWAIVCDIWYLPPMRRD----NDETATQFANRVKSLIGKSAGLKDLEWDGLLK---RAKKSKKLVSEQLT 338 (354)
T ss_pred HHHHHHHHhhhheeeeeeecccEEee----cccchhHHHHHHHHHHHHhhCCcccCcCCcee---ccCCCCcccccccc
Confidence 001111222 2233678999999887 58999999999999999999888776555544 44444444444433
No 60
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.74 E-value=1.5e-07 Score=85.18 Aligned_cols=170 Identities=17% Similarity=0.168 Sum_probs=98.8
Q ss_pred CeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHHHHc--CCCHHHHHHHH
Q 042288 28 KDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFATFA--GMKVPSIESVA 105 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~--G~~~~~l~~~~ 105 (515)
+.+++-|||||++-.|+ ..++..- .+.+.+ ..+ ....+ +.....+..+.++|. +.+.+|+-+
T Consensus 3 k~vi~sDFDGTITl~Ds-~~~itdt-f~~~e~-k~l-------~~~vl----s~tiS~rd~~g~mf~~i~~s~~Eile-- 66 (220)
T COG4359 3 KPVIFSDFDGTITLNDS-NDYITDT-FGPGEW-KAL-------KDGVL----SKTISFRDGFGRMFGSIHSSLEEILE-- 66 (220)
T ss_pred ceEEEecCCCceEecch-hHHHHhc-cCchHH-HHH-------HHHHh----hCceeHHHHHHHHHHhcCCCHHHHHH--
Confidence 34678899999999877 5555421 111221 111 00111 111123333444443 445555443
Q ss_pred HHHhchhh-cCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceE-----EEe-Cceee--eEEecCC
Q 042288 106 RAVLPKFY-SGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEI-----CVY-KGRST--GFVKSPG 175 (515)
Q Consensus 106 ~~~~~~~~-~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l-----~~~-~G~~t--G~i~~~~ 175 (515)
++.+.+ .+--..+.++|+++++ ..+|||++.++++.|+.+.+.|-+.+-+.++ .+. ||.-. +.-+ +
T Consensus 67 --~llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~d--s 142 (220)
T COG4359 67 --FLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDD--S 142 (220)
T ss_pred --HHHhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCc--c
Confidence 333221 1223467888999988 7788999999999999998555554444444 343 33221 1111 2
Q ss_pred ccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceee
Q 042288 176 VLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 176 ~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
. +|-.|...++++... .+..+..|||.+|+.--..++.-++-
T Consensus 143 ~-fG~dK~~vI~~l~e~--~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 143 Q-FGHDKSSVIHELSEP--NESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred c-cCCCcchhHHHhhcC--CceEEEecCCcccccHhhhhhhHhhH
Confidence 2 788899999988665 33345569999999877766665543
No 61
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.74 E-value=1.9e-07 Score=90.18 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=64.1
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.++|.+.+ .++++| ..+|+|++....++++.++ +|+++.+..-+.. ...+ .+..+.+.++.++.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~-------~~~~----~~Kp~~~~~~~~~~ 159 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASA-------EKLP----YSKPHPEVYLNCAA 159 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEc-------ccCC----CCCCCHHHHHHHHH
Confidence 35566555 566889 5678999999999999998 9986555432211 1000 12223445555554
Q ss_pred CCCC--CceEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 192 DDEE--MPDIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 192 ~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
..+. ..++++|||.+|++.-+.||.+.+.-+++
T Consensus 160 ~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 160 KLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred HcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCC
Confidence 4322 33789999999999999999877665544
No 62
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.71 E-value=4e-08 Score=85.73 Aligned_cols=95 Identities=24% Similarity=0.266 Sum_probs=56.6
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeC-ceeeeEEecCCccccc---cHHHHHHHHh
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYK-GRSTGFVKSPGVLVGK---NKAGALMKML 190 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~-G~~tG~i~~~~~~~g~---~K~~~l~~~~ 190 (515)
+.++.++++| .++|+|++....++.++++ +|+ +.++++...... +.-.+......+..+. ++.+.+.+.+
T Consensus 31 ~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (139)
T cd01427 31 EALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLL 109 (139)
T ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHc
Confidence 4445667788 5678999999999999998 886 556655533210 0000101100111223 3334444444
Q ss_pred cCCCCCceEEEeCCcCcHHHHhcccc
Q 042288 191 GDDEEMPDIGLGDRKTDSLFLNLCKE 216 (515)
Q Consensus 191 ~~~~~~~~~aygDS~~DlpmL~~a~~ 216 (515)
+.. ...++++|||.+|+++++.++.
T Consensus 110 ~~~-~~~~~~igD~~~d~~~~~~~g~ 134 (139)
T cd01427 110 GVD-PEEVLMVGDSLNDIEMAKAAGG 134 (139)
T ss_pred CCC-hhhEEEeCCCHHHHHHHHHcCC
Confidence 431 3457899999999999998543
No 63
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.70 E-value=9.2e-08 Score=91.41 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHHHhchh---hc--CCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCce
Q 042288 96 MKVPSIESVARAVLPKF---YS--GDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGR 166 (515)
Q Consensus 96 ~~~~~l~~~~~~~~~~~---~~--~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~ 166 (515)
.+.++++++.+.+...+ +. ..++|.+.+ .++++| .++|+|++....++.+.++ +|+...+..-
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~------- 131 (213)
T TIGR01449 60 PDAQRVAELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVL------- 131 (213)
T ss_pred cChHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEE-------
Confidence 45555555555444322 11 235665554 566789 6678999999999999998 8975332111
Q ss_pred eeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 167 STGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 167 ~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+++. ....+.-+.+.+...+...+ ...++++|||.+|+.+.+.+|-+.+
T Consensus 132 ~~~~----~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 132 IGGD----SLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred EecC----CCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 1110 00011123344444443322 2347889999999999999998766
No 64
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.68 E-value=2e-07 Score=89.82 Aligned_cols=111 Identities=15% Similarity=0.148 Sum_probs=67.7
Q ss_pred CCCHHHHHHHHHHHhchhh-----cCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCc
Q 042288 95 GMKVPSIESVARAVLPKFY-----SGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKG 165 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~-----~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G 165 (515)
..+.++++++.+++...+. ....+|++. +.++++| .++|+|++....++++.+. +|++..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~------- 138 (226)
T PRK13222 67 EPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFSV------- 138 (226)
T ss_pred CccHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCccE-------
Confidence 4666777766665543221 133555554 4666788 5678999999999999998 887543211
Q ss_pred eeeeEEecCCccccccH--HHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 166 RSTGFVKSPGVLVGKNK--AGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 166 ~~tG~i~~~~~~~g~~K--~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+++ .. .+..| .+.++..+...+ ...++++|||.+|+.+.+.+|-..+
T Consensus 139 ~~~~-----~~-~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i 190 (226)
T PRK13222 139 VIGG-----DS-LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSV 190 (226)
T ss_pred EEcC-----CC-CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEE
Confidence 1111 01 12222 333444433321 2447889999999999999998543
No 65
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.55 E-value=9.4e-07 Score=88.18 Aligned_cols=112 Identities=15% Similarity=0.157 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHhchhh----cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCce
Q 042288 95 GMKVPSIESVARAVLPKFY----SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGR 166 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~----~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~ 166 (515)
+.+.+..+++.+.|.+.+. ...++|.+.+ .++++| ..+|+|+++...++++.++ +|++..+.. +
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~-i------ 147 (272)
T PRK13223 76 GVDDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRW-I------ 147 (272)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeE-E------
Confidence 3455555555444433221 1234565555 566788 5678999999999999997 887543221 1
Q ss_pred eeeEEecCCccccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccce
Q 042288 167 STGFVKSPGVLVGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 167 ~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
+++...+ .+.-+.+.++..+...+ ...++++||+.+|+.+.+.+|-..
T Consensus 148 ~~~d~~~----~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 148 IGGDTLP----QKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EecCCCC----CCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeE
Confidence 1111000 11123333333333221 245789999999999999998753
No 66
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]
Probab=98.54 E-value=1.5e-07 Score=100.55 Aligned_cols=173 Identities=17% Similarity=0.184 Sum_probs=113.2
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCC----CccEEE---ecccchhhhhhcCCeeEEecCChhh-------HHHHHHHHH
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGR----PIPAVT---YSLSRLSELISPIKTVRLTRDRATD-------ASMIEKLLE 374 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~----~~~~v~---k~~~~~g~~~~~~~~i~idR~~~~~-------~~~~~~~l~ 374 (515)
...+.|+|.-|.|++|.+++..++-. |.+..+ -+.+.+|++++..|++||.|+-+.. .+-..+...
T Consensus 294 ~gheiVyvpcHRShiDylLLsy~ly~ngLvPpHiaAGINLNf~p~G~i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~Lf~ 373 (810)
T COG2937 294 DGHEIVYVPCHRSHIDYLLLSYVLYHNGLVPPHIAAGINLNFWPMGPIFRRGGAFFIRRTFKGNPLYSTVFREYLGELFS 373 (810)
T ss_pred cCCceEEEecchhhhhHHHHHHHHHhcCCCcchhhccccccCccchHHHHhccceEEEeccCCChhHHHHHHHHHHHHHh
Confidence 35689999999999999999887621 112122 2268889999999999999975533 233455667
Q ss_pred cC-CeEEecCCeeeCCCccccccchh----hc-------cCCcEEEEEEEcCccCccCccc---CC-CccCCccccc---
Q 042288 375 KG-DLVICPEGTTCREPFLLRFSALF----AE-------LTDEVVPVAMSNRMSMFHGTTA---RG-WKGMDPFYFF--- 435 (515)
Q Consensus 375 ~G-~l~IFPEGTrs~~~~l~~Fk~Gf----~~-------~~~pVvPV~i~~~~~~~~~~~~---~~-~~~~~~~~~~--- 435 (515)
+| ++--|=||+||+.|.|++-|.|. .+ -.+-+|||.|-|...+-.++.+ +| -+-.+.+|++
T Consensus 374 rgysleyfIEGGRSRTGrlL~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIgYe~v~Ev~tYa~ElrGa~K~kE~~~~l~r~ 453 (810)
T COG2937 374 RGYSLEYFIEGGRSRTGRLLPPKTGMLSMTLQAMLRGRTRPILLVPVYIGYEHVHEVGTYAKELRGATKEKESLRWLLRV 453 (810)
T ss_pred CCcceEEEeecCccccCCcCCCccchHHHHHHHHhcCCCCCeEEEeeEeehhhHhhHHHHHHHhcCCcCCcccHHHHHHH
Confidence 89 99999999999999999999994 11 1367789999996443222211 12 1222222222
Q ss_pred -c----CCCCeEEEEEeccccCccccC-------CC-----------CCHHHHHHHHHHHHHHHcCCCc
Q 042288 436 -M----NPSPAYEVTFLNKLPYELTCS-------AG-----------KSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 436 -~----~p~~~v~V~~l~pi~~~~~~~-------~~-----------~~~~~la~~v~~~ia~~l~~~~ 481 (515)
. +...++.|.|++||+...+-+ ++ .+...++.+|+..|.++-.+.+
T Consensus 454 i~aqk~Rn~Gq~yVnFGEPi~L~qyL~~~~pew~~d~~~~~kp~w~~~tvn~ia~~V~~rIN~AaaVna 522 (810)
T COG2937 454 IKAQKLRNLGQGYVNFGEPIPLRQYLNQHVPEWRQDPIEEEKPAWLTPTVNKIAFDVMVRINNAAAVNA 522 (810)
T ss_pred HHHHhhhhcCcEEEeCCCCccHHHHhcccChhhhhCcccccCcccccHHHHHHHHHHHHHhhccccCCH
Confidence 1 112348999999998654421 01 1234577777777766555443
No 67
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.48 E-value=1.5e-06 Score=81.13 Aligned_cols=179 Identities=17% Similarity=0.199 Sum_probs=99.7
Q ss_pred ccCCCCCeEEEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhcccCcccHHHHHHHHH-HHcCCCHHH
Q 042288 22 ASIGREKDTVVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLYYYVSESAGIRVLIFA-TFAGMKVPS 100 (515)
Q Consensus 22 ~~~~~~~~lavFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~~G~~~~~ 100 (515)
+.++....+++||||.||++.||- .|.... .........+. ..+|.-. ..+. +.+++.. -=.|.++++
T Consensus 7 s~~~~~ril~~FDFD~TIid~dSD-~wVv~~-lp~~~l~~qL~--~t~p~~~------Wne~-M~rv~k~Lheqgv~~~~ 75 (256)
T KOG3120|consen 7 SASSSPRILLVFDFDRTIIDQDSD-NWVVDE-LPTTDLFNQLR--DTYPKGF------WNEL-MDRVFKELHEQGVRIAE 75 (256)
T ss_pred ccccCCcEEEEEecCceeecCCcc-hHHHHh-cccchhHHHHH--Hhcccch------HHHH-HHHHHHHHHHcCCCHHH
Confidence 444446789999999999999883 454321 21112112221 1122100 0111 1122211 156899999
Q ss_pred HHHHHHHHhchhhcCCCcHHHHHHH---HhCC--CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe-CceeeeE
Q 042288 101 IESVARAVLPKFYSGDLHPETWRVF---SSCG--RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY-KGRSTGF 170 (515)
Q Consensus 101 l~~~~~~~~~~~~~~~~~~~~~~~l---~~~G--~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~-~G~~tG~ 170 (515)
+++..+.. + +.|.+++.+ ++.| ..+|||-+..++++.+.+. +|+ +.++.+.-.++ +|+++=+
T Consensus 76 ik~~~r~i-P------~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~ 147 (256)
T KOG3120|consen 76 IKQVLRSI-P------IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVR 147 (256)
T ss_pred HHHHHhcC-C------CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEee
Confidence 99866664 4 346666644 4688 4577999999999999997 896 45666666665 6776532
Q ss_pred EecC--Ccc---ccccHHHHHHHHhc---CCCC-C-ceEEEeCCcCcH-HHHhcccccee
Q 042288 171 VKSP--GVL---VGKNKAGALMKMLG---DDEE-M-PDIGLGDRKTDS-LFLNLCKESYM 219 (515)
Q Consensus 171 i~~~--~~~---~g~~K~~~l~~~~~---~~~~-~-~~~aygDS~~Dl-pmL~~a~~~~~ 219 (515)
--.. .|. ..-=|-..+.++.. +++. + ..++.||+.||+ |++.....=|+
T Consensus 148 pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~a 207 (256)
T KOG3120|consen 148 PYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVA 207 (256)
T ss_pred cCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCcee
Confidence 1111 121 11113333333322 1222 2 346679999996 66665555443
No 68
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.46 E-value=8.6e-07 Score=87.64 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=57.6
Q ss_pred CEEEEecCcHHHHHHHHHhhcCCcEEEeceEE-Ee---C-c--eeeeEEecCCccc---cccHHHHHHH---HhcCCC-C
Q 042288 130 RRCVLTANPRIMVEAFLKDFLGADMVIGTEIC-VY---K-G--RSTGFVKSPGVLV---GKNKAGALMK---MLGDDE-E 195 (515)
Q Consensus 130 ~~vivSaS~~~~v~~ia~~~lGid~vigt~l~-~~---~-G--~~tG~i~~~~~~~---g~~K~~~l~~---~~~~~~-~ 195 (515)
..++-+++.+.+.+.+ ++ .|+.-+-|.+.- +- + + .+||.+..... . +..|.++++. .+.... .
T Consensus 150 Ep~~w~~~~~~~~~~~-~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~-~~~~~~dKg~A~~~L~~~y~~~~~~ 226 (302)
T PRK12702 150 EIFSYSGDPARLREAF-AQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLA-AEPNSLPGEQAVQLLLDCYQRHLGP 226 (302)
T ss_pred cceEecCCHHHHHHHH-HH-cCCeEEecCceEEecccccccccccccccccccc-cccCCCCHHHHHHHHHHHHHhccCC
Confidence 4566799988774444 44 788766666643 11 1 1 24565433211 2 4466665544 444321 1
Q ss_pred CceEEEeCCcCcHHHHhccccceee-CCCC
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMV-PPNP 224 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~V-np~~ 224 (515)
-.++|.|||.||+|||+.|+.+|+| +|+.
T Consensus 227 ~~tiaLGDspND~~mLe~~D~~vvi~~~~~ 256 (302)
T PRK12702 227 IKALGIGCSPPDLAFLRWSEQKVVLPSPIA 256 (302)
T ss_pred ceEEEecCChhhHHHHHhCCeeEEecCCCC
Confidence 2478999999999999999999999 3444
No 69
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.41 E-value=5.3e-06 Score=79.77 Aligned_cols=112 Identities=14% Similarity=0.096 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHhchh---h---cCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEE
Q 042288 95 GMKVPSIESVARAVLPKF---Y---SGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICV 162 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~---~---~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~ 162 (515)
|.+.++++++.++|...+ + ...++|.+. +.++++| ...|+|++....++.+.+. +|++ ..+-. +
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~~f~~-i-- 135 (220)
T TIGR03351 60 GADEAEAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEK-LGWTVGDDVDA-V-- 135 (220)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-hhhhhhccCCE-E--
Confidence 666666665555444322 1 124555555 4667789 5678999999999999997 8864 32211 1
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCCC---CceEEEeCCcCcHHHHhccccce
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE---MPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~---~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
+++.-.+ .+.-+.+.+...+...+. ..++.+|||.+|+..-+.+|-++
T Consensus 136 ----~~~~~~~----~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 136 ----VCPSDVA----AGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred ----EcCCcCC----CCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 1100000 111133344443333222 34788999999999999999987
No 70
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.37 E-value=4.3e-06 Score=81.20 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=55.2
Q ss_pred CcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.+|. +++.++++| ...|+|.+....++.+.++ +|++..+.. .+. +.-.+.- .| ..+-...+.+.++.
T Consensus 96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~-~~l~~~f~~--i~~-~~~~~~~-KP----~p~~~~~~~~~l~~ 166 (229)
T PRK13226 96 LFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQ-LGWEQRCAV--LIG-GDTLAER-KP----HPLPLLVAAERIGV 166 (229)
T ss_pred eCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCchhcccE--EEe-cCcCCCC-CC----CHHHHHHHHHHhCC
Confidence 4554 445677899 5578999999888888887 887543211 110 0000000 00 11122333333443
Q ss_pred CCCCceEEEeCCcCcHHHHhcccccee
Q 042288 193 DEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 193 ~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
. ...++++|||.+|+.+-+.+|-..+
T Consensus 167 ~-p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 167 A-PTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred C-hhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 1 2447899999999999999998754
No 71
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.36 E-value=1.1e-05 Score=76.24 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=54.2
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
++++.++++| .++|+|.++...++...++ +|+ |.+++++-. |.- .| ..+--+.+.+.++..
T Consensus 99 ~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~-------~~~-KP----~~~~~~~~~~~~~~~- 164 (198)
T TIGR01428 99 AGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAV-------RAY-KP----APQVYQLALEALGVP- 164 (198)
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhc-------CCC-CC----CHHHHHHHHHHhCCC-
Confidence 4455677889 5678999999999999998 886 444444310 100 00 011112222333331
Q ss_pred CCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 195 EMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 195 ~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
...++.+|||.+|+..-+.+|-..+ |++
T Consensus 165 p~~~~~vgD~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 165 PDEVLFVASNPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred hhhEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence 2447889999999999888887643 454
No 72
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.36 E-value=6.1e-06 Score=79.09 Aligned_cols=91 Identities=19% Similarity=0.119 Sum_probs=56.1
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.+|.+. +.++++| ...|+|++....++.+.+. +|++..+-.-+..++ .+ .+.-|.+.++..+..
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~-------~~----~~Kp~p~~~~~~~~~ 150 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKL-TGLDEFFDVVITLDD-------VE----HAKPDPEPVLKALEL 150 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhceeEEEecCc-------CC----CCCCCcHHHHHHHHH
Confidence 445544 4667889 5678999999999999998 897543322111110 00 111123333333322
Q ss_pred CC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 193 DE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 193 ~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ ...++.+|||.+|+..-+.+|-..+
T Consensus 151 ~~~~~~~~~~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 151 LGAKPEEALMVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 11 2347889999999999999998765
No 73
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.35 E-value=7.3e-06 Score=76.35 Aligned_cols=109 Identities=11% Similarity=0.113 Sum_probs=61.7
Q ss_pred CCCHHHHHHHHHH---Hhchhhc---CCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceE
Q 042288 95 GMKVPSIESVARA---VLPKFYS---GDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEI 160 (515)
Q Consensus 95 G~~~~~l~~~~~~---~~~~~~~---~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l 160 (515)
+.+.++++++.+. ++.+.+. ..++|.+.+ .++++| .++|+|++ ..++.+.+. +|++ .++++.-
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~ 137 (185)
T TIGR02009 61 GLSLETIHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDADE 137 (185)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhh
Confidence 5677777666543 3333221 346666555 566788 56778888 557888887 8864 4444321
Q ss_pred EEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 161 CVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 161 ~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
. +. ..| ..+-...+.+.++.. ...++.+|||.+|+..-+.+|-..+
T Consensus 138 ~-------~~-~kp----~~~~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 138 V-------KE-GKP----HPETFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred C-------CC-CCC----ChHHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 0 00 011 111122233333321 2347889999999999888876543
No 74
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.35 E-value=4.4e-06 Score=79.48 Aligned_cols=81 Identities=20% Similarity=0.199 Sum_probs=58.6
Q ss_pred CCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE--EEeceEEEeCceeeeEEecCCccccccH--HHHHH
Q 042288 116 DLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM--VIGTEICVYKGRSTGFVKSPGVLVGKNK--AGALM 187 (515)
Q Consensus 116 ~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~--vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~l~ 187 (515)
.++|++ ++.++++| .++|+||.....++.++++ +|++. +.+-.. + ..+.| .+.++
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~~~~v~a~~~------------~----kP~~k~~~~~i~ 189 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIFDSIVFARVI------------G----KPEPKIFLRIIK 189 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSCSEEEEESHE------------T----TTHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhccCcceeeeeccccccccccccc-ccccccccccccc------------c----cccchhHHHHHH
Confidence 455554 45677899 6788999999999999998 99942 333211 1 34567 77777
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHHhccc
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFLNLCK 215 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL~~a~ 215 (515)
++--. ...+.++||+.||.+|++.||
T Consensus 190 ~l~~~--~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQVK--PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTCT--GGGEEEEESSGGHHHHHHHSS
T ss_pred HHhcC--CCEEEEEccCHHHHHHHHhCc
Confidence 74322 346888999999999999886
No 75
>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]
Probab=98.33 E-value=1.7e-06 Score=89.57 Aligned_cols=145 Identities=17% Similarity=0.162 Sum_probs=98.6
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcC---CCccEEEec----ccchhhhhhcCCeeEEecCC------hhh-H------HHH
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALG---RPIPAVTYS----LSRLSELISPIKTVRLTRDR------ATD-A------SMI 369 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~---~~~~~v~k~----~~~~g~~~~~~~~i~idR~~------~~~-~------~~~ 369 (515)
+-|.|+++=|.|.+|-+++.-++- -....+|.- +|.|||+++.+|.+||.|.- +++ + --+
T Consensus 157 g~PliFlPlHRSHlDYlliTwIL~~~~Ik~P~iAsGNNLnIP~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi 236 (715)
T KOG3729|consen 157 GIPMVFLPLHRSHLDYLLITWILWHFGIKLPHIASGNNLNIPGFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYI 236 (715)
T ss_pred CCceEEEecchhhhhHHHHHHHHHhcCcCCceeccCCccccchHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHHH
Confidence 358999999999999998876552 122445442 89999999999999997731 122 1 235
Q ss_pred HHHHHcC-CeEEecCCeeeCCCccccccchh-------hc----cCCcEEEEEEEcCccC---ccCcccCCCccCCcccc
Q 042288 370 EKLLEKG-DLVICPEGTTCREPFLLRFSALF-------AE----LTDEVVPVAMSNRMSM---FHGTTARGWKGMDPFYF 434 (515)
Q Consensus 370 ~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf-------~~----~~~pVvPV~i~~~~~~---~~~~~~~~~~~~~~~~~ 434 (515)
.+.|++| ++=+|-|||||+.|.-.--|.|. ++ .++=++||.+.|.+.. +.+.+.+--+..+.+|.
T Consensus 237 ~~~L~Q~~~iEfFlEGtRsR~GK~~~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~YdRiveG~f~~EQ~G~pK~~ES~~~ 316 (715)
T KOG3729|consen 237 EQVLSQDMPIEFFLEGTRSRFGKALTPKNGLLSVVVEAVQHGFIPDCLLVPVSYTYDRVVEGIFLHEQMGIPKVRESVLG 316 (715)
T ss_pred HHHHhCCCceEEEEeccccccCCcCCcccccHHHHHHHHhcCCCCceEEEeeeccHHHHhhhhhhHHhcCCCCccHHHHH
Confidence 6789999 99999999999888777778883 22 2467999999996532 11111111112223332
Q ss_pred --------ccCCCCeEEEEEeccccCcc
Q 042288 435 --------FMNPSPAYEVTFLNKLPYEL 454 (515)
Q Consensus 435 --------~~~p~~~v~V~~l~pi~~~~ 454 (515)
+.+.+..++|.|..|++..+
T Consensus 317 v~rGi~~~L~kNYG~vR~DF~~P~Sl~E 344 (715)
T KOG3729|consen 317 VFRGIFSGLSKNYGVVRMDFGRPISLTE 344 (715)
T ss_pred HHHHHHHHHhhcCCeEEEecCCCccHHH
Confidence 22334459999999998764
No 76
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.33 E-value=1.5e-05 Score=76.67 Aligned_cols=94 Identities=16% Similarity=0.072 Sum_probs=55.0
Q ss_pred CcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
++|++ ++.++++| .++|+|.+....++...+. +|++..+-. .+++.-.+ .+.-+.+.++..+..
T Consensus 95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~-------i~~~~~~~----~~KP~~~~~~~~~~~ 162 (221)
T TIGR02253 95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDA-------VITSEEEG----VEKPHPKIFYAALKR 162 (221)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccE-------EEEeccCC----CCCCCHHHHHHHHHH
Confidence 45554 45667788 5678999988888888887 887532211 11111111 111122333333332
Q ss_pred CC--CCceEEEeCCc-CcHHHHhccccce-eeCC
Q 042288 193 DE--EMPDIGLGDRK-TDSLFLNLCKESY-MVPP 222 (515)
Q Consensus 193 ~~--~~~~~aygDS~-~DlpmL~~a~~~~-~Vnp 222 (515)
.+ ...++.+|||. +|+..-+.+|-.. .|+.
T Consensus 163 ~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 163 LGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred cCCChhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 21 23478899997 8999999998654 4543
No 77
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed
Probab=98.32 E-value=3e-06 Score=85.74 Aligned_cols=163 Identities=13% Similarity=0.130 Sum_probs=100.6
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHH-hcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLST-ALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~-~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
+++++|.|+++..- ..++|+|++++|.+++|...... ....++..+++. .+.+-.++. ..|.-.++. ...
T Consensus 96 ~v~i~g~e~l~~a~-~~g~gvI~~t~H~GnwE~~~~~l~~~~~~~~~v~~~~~n~~~~~~~~~~R~~~g~~~i~~--~~~ 172 (298)
T PRK08419 96 KVTFINEENLLDAL-KKKRPIIVTTAHYGYWELFSLALAAYYGAVSIVGRLLKSAPINEMISKRREQFGIELIDK--KGA 172 (298)
T ss_pred cEEEECHHHHHHHH-HcCCCEEEEeeCccHHHHHHHHHHhcCCCeEEEEeCCCChHHHHHHHHHHHHcCCeeEEC--ccH
Confidence 67889999875210 03679999999999999986543 333467778776 455544433 234444432 335
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCccc-------cccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLL-------RFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~-------~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
+..+.+.|++| .++++|....+ .++... .+..|. ...++||+||.+....
T Consensus 173 ~r~~l~~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~~----------------- 235 (298)
T PRK08419 173 MKELLKALKQGRALGILVDQNVVPKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFNDD----------------- 235 (298)
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEECC-----------------
Confidence 77888999999 89999955543 333333 446662 5579999999995321
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
+..++|++.||++.++.....++..+.++++-+.+++......
T Consensus 236 ------~~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~lE~~Ir~~P 278 (298)
T PRK08419 236 ------YSHFTITFFPPIRSKITDDAEADILEATQAQASACEEMIRKKP 278 (298)
T ss_pred ------CCeEEEEEcCCccCCCCCChHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1127888899997543210112234455555555555444333
No 78
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.29 E-value=1.4e-05 Score=74.65 Aligned_cols=83 Identities=12% Similarity=0.055 Sum_probs=50.3
Q ss_pred HHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--
Q 042288 121 TWRVFSSCGRRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE-- 194 (515)
Q Consensus 121 ~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~-- 194 (515)
.++.++++....|+|+++...++...++ +|++ .+++++-. + ...-+.+.+...+...+
T Consensus 95 ~L~~L~~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~-------~--------~~KP~p~~~~~~~~~~~~~ 158 (188)
T PRK10725 95 VVKAWHGRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDV-------Q--------HHKPAPDTFLRCAQLMGVQ 158 (188)
T ss_pred HHHHHHhCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhc-------c--------CCCCChHHHHHHHHHcCCC
Confidence 3334443335678999999999999998 8864 44443310 0 11123333444333321
Q ss_pred CCceEEEeCCcCcHHHHhcccccee
Q 042288 195 EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 195 ~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...++.+|||.+|+.--+.+|-.++
T Consensus 159 ~~~~l~igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 159 PTQCVVFEDADFGIQAARAAGMDAV 183 (188)
T ss_pred HHHeEEEeccHhhHHHHHHCCCEEE
Confidence 2337889999999999888887654
No 79
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.23 E-value=2e-05 Score=78.70 Aligned_cols=88 Identities=20% Similarity=0.242 Sum_probs=56.8
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
.+|.+.+ .++++| ...|+|++....++.+.+. +|+...+-. + +++. . . ..|.+.+...+..
T Consensus 143 l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~-~gl~~~F~~-v------i~~~----~--~-~~k~~~~~~~l~~ 207 (273)
T PRK13225 143 LFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQR-QGLRSLFSV-V------QAGT----P--I-LSKRRALSQLVAR 207 (273)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhheEE-E------EecC----C--C-CCCHHHHHHHHHH
Confidence 4565554 666789 6678999999999999998 897543321 1 1111 0 1 1244444444332
Q ss_pred CC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 193 DE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 193 ~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ ...++.+|||.+|+..-+.+|-..+
T Consensus 208 ~~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 208 EGWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred hCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 11 2347889999999999999988754
No 80
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.23 E-value=2.7e-05 Score=76.71 Aligned_cols=107 Identities=14% Similarity=0.053 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHhch---hhc--CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-----EEEeceEEE
Q 042288 97 KVPSIESVARAVLPK---FYS--GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-----MVIGTEICV 162 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~---~~~--~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-----~vigt~l~~ 162 (515)
+.++++++.++|... .+. ..++|.+. +.++++| ...|+|+++...++.+.++ +|++ .+++++-
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~-- 151 (253)
T TIGR01422 75 TEADIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDD-- 151 (253)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEcccc--
Confidence 455666555555321 111 23455544 4667889 6678999999999999887 7753 3333321
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCC---CCceEEEeCCcCcHHHHhcccccee
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE---EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~---~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ .+.-+.+.+...+...+ ...++.+|||.+|+..=+.+|-..+
T Consensus 152 ---------~~----~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i 198 (253)
T TIGR01422 152 ---------VP----AGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTV 198 (253)
T ss_pred ---------CC----CCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEE
Confidence 00 01112223332222211 2347889999999999999986554
No 81
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.21 E-value=1.2e-05 Score=77.66 Aligned_cols=92 Identities=21% Similarity=0.184 Sum_probs=56.5
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCce
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD 198 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~ 198 (515)
+++++++++| ...|+|.-++..++.+++. +|++..+......++. ....|+ ..-+..+.+.++.. ....
T Consensus 96 e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~----~~~KP~----P~~l~~~~~~~~~~-~~~~ 165 (220)
T COG0546 96 ELLAALKSAGYKLGIVTNKPERELDILLKA-LGLADYFDVIVGGDDV----PPPKPD----PEPLLLLLEKLGLD-PEEA 165 (220)
T ss_pred HHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCCCC----CCCCcC----HHHHHHHHHHhCCC-hhhe
Confidence 4455777899 6678999999999999998 9976433322211000 000011 12222333444442 1246
Q ss_pred EEEeCCcCcHHHHhccccc-eeeC
Q 042288 199 IGLGDRKTDSLFLNLCKES-YMVP 221 (515)
Q Consensus 199 ~aygDS~~DlpmL~~a~~~-~~Vn 221 (515)
+.+|||.+|+.+=+.|+-+ +.|.
T Consensus 166 l~VGDs~~Di~aA~~Ag~~~v~v~ 189 (220)
T COG0546 166 LMVGDSLNDILAAKAAGVPAVGVT 189 (220)
T ss_pred EEECCCHHHHHHHHHcCCCEEEEE
Confidence 8899999999999999955 4343
No 82
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.21 E-value=1.1e-05 Score=78.50 Aligned_cols=84 Identities=12% Similarity=0.042 Sum_probs=56.1
Q ss_pred cHHHHHHHHhCC-CEEEEecC----cHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 118 HPETWRVFSSCG-RRCVLTAN----PRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 118 ~~~~~~~l~~~G-~~vivSaS----~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
..+++++|+++| .+.+||+. .+..++.+.+. +|+++.+. . .++|...+. ...+|..++ ..
T Consensus 119 a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~--~-----i~~~d~~~~---~Kp~~~~~l----~~ 183 (237)
T TIGR01672 119 ARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNP--V-----IFAGDKPGQ---YQYTKTQWI----QD 183 (237)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchhee--E-----EECCCCCCC---CCCCHHHHH----Hh
Confidence 457777889999 56789998 88899999997 99975431 1 122222111 112343333 22
Q ss_pred CCCCceEEEeCCcCcHHHHhccccce
Q 042288 193 DEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 193 ~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
...+++||||.+|+.--+.|+...
T Consensus 184 --~~i~i~vGDs~~DI~aAk~AGi~~ 207 (237)
T TIGR01672 184 --KNIRIHYGDSDNDITAAKEAGARG 207 (237)
T ss_pred --CCCeEEEeCCHHHHHHHHHCCCCE
Confidence 344788999999999888888774
No 83
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.21 E-value=1.3e-05 Score=76.17 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=56.9
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
++|++.+ .++++| ..+|+|++....++...+. +|++..+-.-+..++ +..+.-|.+.+++.+..
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~-----------~~~~KP~~~~~~~~~~~ 143 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSDE-----------VPRPKPAPDIVREALRL 143 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecCc-----------CCCCCCChHHHHHHHHH
Confidence 4555554 666889 6778999999999999887 897533321111000 00112234444444333
Q ss_pred CC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 193 DE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 193 ~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ ...++.+|||.+|+..-+.+|-+.+
T Consensus 144 ~~~~~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 144 LDVPPEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred cCCChhheEEEcCCHHHHHHHHHcCCeEE
Confidence 22 2347889999999999999998764
No 84
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=98.18 E-value=5.2e-05 Score=72.81 Aligned_cols=90 Identities=16% Similarity=0.071 Sum_probs=55.2
Q ss_pred CCcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 116 DLHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.++|++.+ .++++..++|+|++....+++..+. +|+ |.++++.-. + + ..-+.+.++.
T Consensus 97 ~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~-----------~--~--~KP~~~~~~~ 160 (224)
T TIGR02254 97 QLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDA-----------G--I--QKPDKEIFNY 160 (224)
T ss_pred eeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCcc-----------C--C--CCCCHHHHHH
Confidence 46676665 4455534577999999999999998 886 444443210 0 0 0112222222
Q ss_pred ---Hh-cCCCCCceEEEeCCc-CcHHHHhccccce-eeCC
Q 042288 189 ---ML-GDDEEMPDIGLGDRK-TDSLFLNLCKESY-MVPP 222 (515)
Q Consensus 189 ---~~-~~~~~~~~~aygDS~-~DlpmL~~a~~~~-~Vnp 222 (515)
.+ +.. ...++.+|||. +|+..-+.+|-.. .++.
T Consensus 161 ~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 161 ALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred HHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 23 321 34478899998 7999999988754 4554
No 85
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.18 E-value=1.5e-05 Score=85.54 Aligned_cols=91 Identities=12% Similarity=0.068 Sum_probs=58.2
Q ss_pred CCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 116 DLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 116 ~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.++|.+. ++++++| ...|+|++....++.+.+. +|++..+..-+..++ . .+..|..-+...+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~-----------v-~~~~kP~~~~~al~ 396 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQ-----------I-NSLNKSDLVKSILN 396 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCC-----------C-CCCCCcHHHHHHHH
Confidence 3555544 4677889 6678999999999999997 897543322111111 0 11123344444443
Q ss_pred CCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
..+...++++|||.+|+..-+.||-..+
T Consensus 397 ~l~~~~~v~VGDs~~Di~aAk~AG~~~I 424 (459)
T PRK06698 397 KYDIKEAAVVGDRLSDINAAKDNGLIAI 424 (459)
T ss_pred hcCcceEEEEeCCHHHHHHHHHCCCeEE
Confidence 3223458899999999999999997543
No 86
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.16 E-value=4.9e-05 Score=74.76 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=54.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHH---HHhc
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM---KMLG 191 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~---~~~~ 191 (515)
++++.++++| ...|+|++....++...++ +|++ .+++.+-. + .+.-+.+.+. +.++
T Consensus 115 e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~-----------~----~~KP~p~~~~~a~~~~~ 178 (248)
T PLN02770 115 KLKKWIEDRGLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSEC-----------E----HAKPHPDPYLKALEVLK 178 (248)
T ss_pred HHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcC-----------C----CCCCChHHHHHHHHHhC
Confidence 4445677899 6688999999999999998 8864 34443310 0 1111222222 2333
Q ss_pred CCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.. ...++.+|||.+|+..-+.+|-.++
T Consensus 179 ~~-~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 179 VS-KDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred CC-hhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 21 2447889999999999999998865
No 87
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.14 E-value=3e-05 Score=73.36 Aligned_cols=83 Identities=19% Similarity=0.179 Sum_probs=49.8
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCc
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMP 197 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~ 197 (515)
.++++.++++| ...|+|+++...++.+.+. +|++..+-.-+..++. +. .|. .+.-...+++ ++.. ...
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~---~~--KP~---p~~~~~~~~~-~~~~-~~~ 180 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDC---PP--KPN---PEPLILAAKA-LGVE-ACH 180 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCC---CC--CcC---HHHHHHHHHH-hCcC-ccc
Confidence 57778888899 6788999999999999998 9976544211111110 00 111 1111112222 3321 245
Q ss_pred eEEEeCCcCcHHHHh
Q 042288 198 DIGLGDRKTDSLFLN 212 (515)
Q Consensus 198 ~~aygDS~~DlpmL~ 212 (515)
++.+|||.+|+..-+
T Consensus 181 ~i~vGD~~~Di~aA~ 195 (197)
T TIGR01548 181 AAMVGDTVDDIITGR 195 (197)
T ss_pred EEEEeCCHHHHHHHH
Confidence 788999999987543
No 88
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.14 E-value=4.2e-05 Score=75.76 Aligned_cols=87 Identities=17% Similarity=0.180 Sum_probs=55.5
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
++|.+.+ .++++| ..+|+|++....++.+.+. +|++ .+++++- +..+.-+.+.+..
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d---------------~~~~KP~Pe~~~~ 173 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAED---------------VYRGKPDPEMFMY 173 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEeccc---------------CCCCCCCHHHHHH
Confidence 4555554 566789 6678999999999999997 8864 3444321 1011112333333
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+...+ ...++++|||.+|+..-+.+|-.++
T Consensus 174 a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i 206 (260)
T PLN03243 174 AAERLGFIPERCIVFGNSNSSVEAAHDGCMKCV 206 (260)
T ss_pred HHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 333221 2347889999999999999988653
No 89
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.14 E-value=5e-06 Score=92.11 Aligned_cols=97 Identities=12% Similarity=0.131 Sum_probs=77.5
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .++++| +++++||.....++.+|++ +|+|++++ .+ ..++|.+.++++
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v~a-----------------~~-~PedK~~~v~~l 504 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDFIA-----------------EA-TPEDKIALIRQE 504 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEEEc-----------------CC-CHHHHHHHHHHH
Confidence 4456666555 677899 6778999999999999999 99987654 24 678899999998
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
..+ ......+||+.||.|+|+.|+.++++++.....+-|.
T Consensus 505 q~~--g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaa 544 (675)
T TIGR01497 505 QAE--GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA 544 (675)
T ss_pred HHc--CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC
Confidence 654 3457778999999999999999999997655554443
No 90
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=98.10 E-value=3e-05 Score=72.18 Aligned_cols=86 Identities=13% Similarity=0.114 Sum_probs=49.7
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccHHHHHH
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM 187 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~ 187 (515)
..+|.+.+ .++++| ...|+|.+.. ...+.++ +|++ .++++.- .+ ...-+.+.++
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPAE-----------IK----KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhh-----------cC----CCCCChHHHH
Confidence 45666555 566789 5677887643 3566776 8854 3333220 00 1112334444
Q ss_pred HHhcCCCC--CceEEEeCCcCcHHHHhcccccee
Q 042288 188 KMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 188 ~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
..+...+. ..++.+|||.+|+..-+.+|-..+
T Consensus 149 ~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i 182 (185)
T TIGR01990 149 AAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV 182 (185)
T ss_pred HHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEE
Confidence 44333222 337889999999999888887643
No 91
>PLN02349 glycerol-3-phosphate acyltransferase
Probab=98.09 E-value=8.4e-06 Score=82.62 Aligned_cols=164 Identities=12% Similarity=0.102 Sum_probs=94.1
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCC-------CccEEEec----ccchhhhh--hcCCeeEEec---CCh---------
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGR-------PIPAVTYS----LSRLSELI--SPIKTVRLTR---DRA--------- 363 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~-------~~~~v~k~----~~~~g~~~--~~~~~i~idR---~~~--------- 363 (515)
.+.++|++|||||-.|+-++..++.. .+.+|+-. -|+..+|- +-+=||+..+ +.+
T Consensus 199 ~g~nVvllsNHQseaDp~ii~llle~~~p~iae~~iyvAGdrv~~DpL~~PFSmGrNLlCVySKKhm~d~Pelke~K~~~ 278 (426)
T PLN02349 199 QGHNVVLLSNHQSEADPAVIALLLEKSHPYLAENVTYVAGDRVVTDPLCKPFSMGRNLICVHSKKHMNDDPELKEMKRKA 278 (426)
T ss_pred cCCCEEEEeccccccchHHHHHHHhccCHHHHhhhhhhccceEeeccccCccccCCceEEEEeccccCCChhhHHHHHHH
Confidence 34689999999999999988776532 23555542 24433321 1223555433 111
Q ss_pred --hhHHHHHHHHHcC--CeEEecCCeeeCCCc-cc-----cccchh--------hccCC--cEEEEEEEcCccCccCccc
Q 042288 364 --TDASMIEKLLEKG--DLVICPEGTTCREPF-LL-----RFSALF--------AELTD--EVVPVAMSNRMSMFHGTTA 423 (515)
Q Consensus 364 --~~~~~~~~~l~~G--~l~IFPEGTrs~~~~-l~-----~Fk~Gf--------~~~~~--pVvPV~i~~~~~~~~~~~~ 423 (515)
++++.++..|++| .++|||||||++... -. ||-+-. ..+++ -+.|.++..+..+|...+.
T Consensus 279 N~kslk~~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~papFD~~svd~mR~l~~~s~~ptHfYPlAl~~yDImPPP~~V 358 (426)
T PLN02349 279 NTRTLKEMALLLREGGQLIWIAPSGGRDRPDPLTGEWTPAPFDPSAVDNMRRLTEKSKAPGHFYPLAMLSYDIMPPPPQV 358 (426)
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCCCCCCCCccCCCccCCCCChHHHHHHHHHHHhcCCCccccchHHHhCccCCCcccc
Confidence 1255666778886 689999999996544 33 344331 22454 5889999998888765522
Q ss_pred CCCccCCccccccCCCCeEEEEEeccccCccccC----CCCCHHHHHHHHHHHHHHH
Q 042288 424 RGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTCS----AGKSSHDVANYIQRLIATS 476 (515)
Q Consensus 424 ~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~----~~~~~~~la~~v~~~ia~~ 476 (515)
- -...+.-.-.+. -+-+.++|-|+.++... ..+.++++++.+...+.+.
T Consensus 359 E-keIGE~R~v~F~---gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~~~V~~~ 411 (426)
T PLN02349 359 E-KEIGERRLVGFT---GVGLSVGEEIDFSDITAACEGGAEAREAFTQAAYASVVEQ 411 (426)
T ss_pred c-cccCceeeeeee---cceeeeccccchHhhhhhcCChHHHHHHHHHHHHHHHHHH
Confidence 1 000111111122 26677888887654321 1233466777776665543
No 92
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.08 E-value=2.4e-05 Score=81.03 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=56.3
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
++|.+.+ .++++| ...|+|+++...++.+.+. +|+ |.+++++-. + .+.-+.+.+..
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv-----------~----~~KP~Peifl~ 280 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDV-----------Y----RGKPDPEMFIY 280 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcC-----------C----CCCCCHHHHHH
Confidence 4555554 566789 6788999999999999998 886 445443311 0 11112233333
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+...+ ...++.+|||.+|+..-+.+|-..+
T Consensus 281 A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 281 AAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred HHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 322211 3447889999999999998887655
No 93
>PRK11587 putative phosphatase; Provisional
Probab=98.07 E-value=7.7e-05 Score=71.76 Aligned_cols=89 Identities=18% Similarity=0.150 Sum_probs=52.2
Q ss_pred CcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc---EEEeceEEEeCceeeeEEecCCccccccHHHHHH--
Q 042288 117 LHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD---MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM-- 187 (515)
Q Consensus 117 ~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid---~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~-- 187 (515)
++|.+. +.++++| ...|+|.+....++...+. +|+. .+++.+- + + ...-+.+.+.
T Consensus 84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l~~~~~i~~~~~----------~-~----~~KP~p~~~~~~ 147 (218)
T PRK11587 84 ALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGLPAPEVFVTAER----------V-K----RGKPEPDAYLLG 147 (218)
T ss_pred eCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCCCCccEEEEHHH----------h-c----CCCCCcHHHHHH
Confidence 455544 4667899 6788998877777766665 6653 2222210 0 0 0001112222
Q ss_pred -HHhcCCCCCceEEEeCCcCcHHHHhccccc-eeeCC
Q 042288 188 -KMLGDDEEMPDIGLGDRKTDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 188 -~~~~~~~~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 222 (515)
+.++.. ...++.+|||..|+..-+.+|-. +.|+.
T Consensus 148 ~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 148 AQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred HHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 223321 34478899999999999999864 55654
No 94
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.04 E-value=0.00012 Score=72.65 Aligned_cols=107 Identities=13% Similarity=0.021 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHhchh---hc--CCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC-----cEEEeceEEE
Q 042288 97 KVPSIESVARAVLPKF---YS--GDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA-----DMVIGTEICV 162 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~---~~--~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-----d~vigt~l~~ 162 (515)
+.++++++.++|...+ +. ...+|. +++.++++| ...|+|+++...++.+.+. +|+ |.+++++-
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~-- 153 (267)
T PRK13478 77 TEADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDD-- 153 (267)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCc--
Confidence 4455555544443221 11 234554 445677889 6678999999998888876 554 33333221
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCC---CCceEEEeCCcCcHHHHhcccccee
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE---EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~---~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
.+ .+.-+.+.+...+...+ ...++.+|||.+|+..-+.+|-..+
T Consensus 154 ---------~~----~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i 200 (267)
T PRK13478 154 ---------VP----AGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTV 200 (267)
T ss_pred ---------CC----CCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEE
Confidence 00 11112233333333222 2347889999999999999987654
No 95
>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]
Probab=98.00 E-value=7.6e-06 Score=83.74 Aligned_cols=160 Identities=16% Similarity=0.177 Sum_probs=106.3
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhc---CCCccEEEec-----ccchhhhhhcCCeeEEecCC
Q 042288 291 GVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL---GRPIPAVTYS-----LSRLSELISPIKTVRLTRDR 362 (515)
Q Consensus 291 Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~---~~~~~~v~k~-----~~~~g~~~~~~~~i~idR~~ 362 (515)
|+.|.-.+..++.. +..+.|+|+.+.|.||+|.++|..++ .-++..+|.- ...+|.+++..|++|..|+-
T Consensus 132 g~yVNe~~~~~vr~--~~~k~pV~~lPSHrsY~DFlllS~icy~YDi~iP~IAAGmDF~sMk~mg~~LR~sGAFFMRRsF 209 (685)
T KOG3730|consen 132 GFYVNEASMANVRK--DMGKCPVLYLPSHRSYMDFLLLSYICYYYDIEIPGIAAGMDFHSMKGMGTMLRKSGAFFMRRSF 209 (685)
T ss_pred ceeECHHHHHHHHH--HhccCCEEEeccchhHHHHHHHHHHHHhccCCCchhhcccchHhhhHHHHHHHhcccceeeecc
Confidence 66665555555531 12466999999999999999887654 2234445442 56789999999999999976
Q ss_pred hhh-------HHHHHHHHHcC--CeEEecCCeeeCCCccccccchh--------hc---cCCcEEEEEEEcCccC-----
Q 042288 363 ATD-------ASMIEKLLEKG--DLVICPEGTTCREPFLLRFSALF--------AE---LTDEVVPVAMSNRMSM----- 417 (515)
Q Consensus 363 ~~~-------~~~~~~~l~~G--~l~IFPEGTrs~~~~l~~Fk~Gf--------~~---~~~pVvPV~i~~~~~~----- 417 (515)
..+ .+-+...+.++ .+=.|-|||||+...-+.-|-|. +. -++-||||.+.|.+.+
T Consensus 210 g~d~LYWaVFsEYv~t~v~N~~~~VEFFiEgTRSR~~K~L~PK~GlL~mvlePyf~geV~Dv~iVPVSv~YdkILEE~Ly 289 (685)
T KOG3730|consen 210 GNDELYWAVFSEYVYTLVANYHIGVEFFIEGTRSRNFKALVPKIGLLSMVLEPYFTGEVPDVMIVPVSVAYDKILEEQLY 289 (685)
T ss_pred CCceehHHHHHHHHHHHHhcCCCceEEEEeecccccccccCcchhhHHHHHhhhhcCCcCceEEEEeeecHHHHHHHHHH
Confidence 544 35566677888 78999999999887766667773 22 2468999999996432
Q ss_pred -------ccCccc-CCCccCCccccc-cCCCCeEEEEEeccccCccc
Q 042288 418 -------FHGTTA-RGWKGMDPFYFF-MNPSPAYEVTFLNKLPYELT 455 (515)
Q Consensus 418 -------~~~~~~-~~~~~~~~~~~~-~~p~~~v~V~~l~pi~~~~~ 455 (515)
|+.... .|. ......+ -+-|. +.+.|++||+..++
T Consensus 290 vYELLGvPKPKEST~gl--lKArkil~e~fGs-~fl~FGePISvr~~ 333 (685)
T KOG3730|consen 290 VYELLGVPKPKESTKGL--LKARKILDERFGS-MFLDFGEPISVREF 333 (685)
T ss_pred HHHHhCCCCcccchhHH--HHHHHHHHhhcCc-EEEecCCCccHHHH
Confidence 222210 110 0000011 12345 89999999987765
No 96
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.98 E-value=0.00026 Score=68.56 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=52.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccH--HHHHH---HH
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNK--AGALM---KM 189 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~l~---~~ 189 (515)
+.++.++++| ...|+|.+....++...+. +|+ |.+++++-. +..| .+.+. +.
T Consensus 100 e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~-----------------~~~KP~p~~~~~~~~~ 161 (224)
T PRK14988 100 PFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTF-----------------GYPKEDQRLWQAVAEH 161 (224)
T ss_pred HHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeC-----------------CCCCCCHHHHHHHHHH
Confidence 4445677899 5678999988888888886 885 455554411 1112 22222 33
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccce
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
++.. ...++++|||.+|+..=+.+|-..
T Consensus 162 ~~~~-p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 162 TGLK-AERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred cCCC-hHHEEEEcCCHHHHHHHHHcCCeE
Confidence 3321 234788999999999988998864
No 97
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.97 E-value=2.6e-05 Score=70.99 Aligned_cols=83 Identities=20% Similarity=0.131 Sum_probs=63.6
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--CCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--EMP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~~~ 197 (515)
+++.|+++| .+.|+|+.+...++.++++ +|++..+... ..|.+.+++++...+ ...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~~--------------------~~k~~~~~~~~~~~~~~~~~ 94 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQGQ--------------------SNKLIAFSDILEKLALAPEN 94 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEecc--------------------cchHHHHHHHHHHcCCCHHH
Confidence 677888899 5678999999999999998 9998654210 136666666655422 234
Q ss_pred eEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
++++|||.+|++|++.++.++++++..
T Consensus 95 ~~~vGDs~~D~~~~~~ag~~~~v~~~~ 121 (154)
T TIGR01670 95 VAYIGDDLIDWPVMEKVGLSVAVADAH 121 (154)
T ss_pred EEEECCCHHHHHHHHHCCCeEecCCcC
Confidence 788999999999999999999997653
No 98
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.96 E-value=9.7e-05 Score=69.74 Aligned_cols=113 Identities=4% Similarity=-0.129 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHhchhhc--CCCcHHHHH---HHHhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeE
Q 042288 96 MKVPSIESVARAVLPKFYS--GDLHPETWR---VFSSCGRRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGF 170 (515)
Q Consensus 96 ~~~~~l~~~~~~~~~~~~~--~~~~~~~~~---~l~~~G~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~ 170 (515)
.+.++++++.+.|..+.+. -..+|.+.+ .+++++..+++|++.........+. +|++..+-.-. +..+++.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~-~~l~~~f~~~f---~~i~~~~ 127 (197)
T PHA02597 52 CDQELAKKLIEKYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQ-FNLNALFPGAF---SEVLMCG 127 (197)
T ss_pred ccHHHHHHHhhhhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhh-CCHHHhCCCcc---cEEEEec
Confidence 3555566655555432211 124565555 5555666566676655444444454 66542221100 0111111
Q ss_pred EecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcc--cccee
Q 042288 171 VKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLC--KESYM 219 (515)
Q Consensus 171 i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a--~~~~~ 219 (515)
. ...|.+.+...+...+...++++|||.+|+.--+.+ |-.++
T Consensus 128 ~-------~~~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 128 H-------DESKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred c-------CcccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 1 122555555544442223467899999998877776 66544
No 99
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=97.96 E-value=0.0001 Score=70.96 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHhchhh--cCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEec
Q 042288 97 KVPSIESVARAVLPKFY--SGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKS 173 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~ 173 (515)
+.+++.+..++.+...+ ....+|.+.+.++.-+ .+.|+|++....++...++ +|++..+-..+ +++.-.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v------~~~~~~~ 139 (221)
T PRK10563 67 AKAELEPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGK-TGMLHYFPDKL------FSGYDIQ 139 (221)
T ss_pred CHHHHHHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHh-cChHHhCcceE------eeHHhcC
Confidence 45666554443332221 1245677877777767 6788999999999988887 88743222111 1111001
Q ss_pred CCccccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhcccccee
Q 042288 174 PGVLVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 174 ~~~~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...-+.+.+...+...+. ..++.+|||.+|+.-=+.+|-+++
T Consensus 140 ----~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 140 ----RWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred ----CCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 011123344433333222 337889999999998888887765
No 100
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=97.94 E-value=0.00022 Score=67.57 Aligned_cols=101 Identities=18% Similarity=0.198 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHhchhh---cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCc
Q 042288 97 KVPSIESVARAVLPKFY---SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKG 165 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~---~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G 165 (515)
+.+++.+..++++..+. .-.++|++.+ .++++| .++|+|.+...+ +...+. +|+ |.++++.-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~-~~l~~~fd~i~~s~~----- 155 (203)
T TIGR02252 83 DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEA-LGLLEYFDFVVTSYE----- 155 (203)
T ss_pred CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHH-CCcHHhcceEEeecc-----
Confidence 34566666666554321 1134555555 566789 567789887654 677776 886 34443321
Q ss_pred eeeeEEecCCccccccH--HHHHHH---HhcCCCCCceEEEeCCc-CcHHHHhccccc
Q 042288 166 RSTGFVKSPGVLVGKNK--AGALMK---MLGDDEEMPDIGLGDRK-TDSLFLNLCKES 217 (515)
Q Consensus 166 ~~tG~i~~~~~~~g~~K--~~~l~~---~~~~~~~~~~~aygDS~-~DlpmL~~a~~~ 217 (515)
.+..| .+.++. .++.. ...++.+|||. +|+..=+.+|-.
T Consensus 156 ------------~~~~KP~~~~~~~~~~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 ------------VGAEKPDPKIFQEALERAGIS-PEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred ------------cCCCCCCHHHHHHHHHHcCCC-hhHEEEECCCchHHHHHHHHcCCe
Confidence 11112 122232 33321 23478899997 899888777754
No 101
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.93 E-value=9.4e-05 Score=68.48 Aligned_cols=88 Identities=17% Similarity=0.089 Sum_probs=51.0
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHH
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM 187 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~ 187 (515)
.++|.+.+ .++++| .++|+|+++... +.+.++ +|+ |.+++++- .+ ..--..+-.+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~-----------~~-~~KP~~~~~~~~~ 150 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGD-----------VG-RGKPDPDIYLLAL 150 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCC-----------CC-CCCCCHHHHHHHH
Confidence 35566555 566789 567899998887 767666 786 44444321 01 0000011122333
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHHhccccce
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
+.++.. ...++.+|||..|+..-+.+|-..
T Consensus 151 ~~~~~~-~~~~~~vgD~~~di~aA~~~G~~~ 180 (183)
T TIGR01509 151 KKLGLK-PEECLFVDDSPAGIEAAKAAGMHT 180 (183)
T ss_pred HHcCCC-cceEEEEcCCHHHHHHHHHcCCEE
Confidence 333331 345788999999998888777643
No 102
>PLN02940 riboflavin kinase
Probab=97.87 E-value=0.00013 Score=76.26 Aligned_cols=85 Identities=13% Similarity=0.146 Sum_probs=52.7
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
++++.++++| ...|+|++....++...++++|+ |.+++++-. + .+.-+.+.+...+...+
T Consensus 100 elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v-----------~----~~KP~p~~~~~a~~~lg 164 (382)
T PLN02940 100 RLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV-----------E----KGKPSPDIFLEAAKRLN 164 (382)
T ss_pred HHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc-----------C----CCCCCHHHHHHHHHHcC
Confidence 3445667889 67889999988888777622675 555554410 0 11112233333333211
Q ss_pred --CCceEEEeCCcCcHHHHhcccccee
Q 042288 195 --EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 195 --~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...++.+|||.+|+..-+.+|-..+
T Consensus 165 v~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 165 VEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred CChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 2447889999999999998887654
No 103
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.78 E-value=0.00039 Score=76.34 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=36.4
Q ss_pred cccHHHHHHHHhcCCC--CCceEEE--eCCcCcHHHHhccccceeeC-CCCCCCcc
Q 042288 179 GKNKAGALMKMLGDDE--EMPDIGL--GDRKTDSLFLNLCKESYMVP-PNPKVDPV 229 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~--~~~~~ay--gDS~~DlpmL~~a~~~~~Vn-p~~~l~~~ 229 (515)
|..|..+|+.++...+ .....++ |||.||++||+.|+.++++. |+.+.-.+
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~~~~~l 666 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGNKWHKM 666 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCCCCCcc
Confidence 4568887777654422 1234555 99999999999999999994 66655444
No 104
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.77 E-value=0.00043 Score=62.95 Aligned_cols=101 Identities=20% Similarity=0.181 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhchhhcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeee
Q 042288 98 VPSIESVARAVLPKFYSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTG 169 (515)
Q Consensus 98 ~~~l~~~~~~~~~~~~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG 169 (515)
.+++.+...++... -....+|++.+ .++++| .++++|.+....++...++ +|+ |.++++.-
T Consensus 60 ~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~--------- 128 (176)
T PF13419_consen 60 PEEIQELFREYNLE-SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDD--------- 128 (176)
T ss_dssp HHHHHHHHHHHHHH-GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGG---------
T ss_pred HHHHHHHhhhhhhh-hccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccch---------
Confidence 55666655555211 12334555554 566688 5677999999999999998 885 45555431
Q ss_pred EEecCCccccccHH--HHHH---HHhcCCCCCceEEEeCCcCcHHHHhccccce
Q 042288 170 FVKSPGVLVGKNKA--GALM---KMLGDDEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 170 ~i~~~~~~~g~~K~--~~l~---~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
.+..|. ..++ +.++.. ...++.+|||..|+..-+.+|-..
T Consensus 129 --------~~~~Kp~~~~~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 129 --------VGSRKPDPDAYRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp --------SSSSTTSHHHHHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSEE
T ss_pred --------hhhhhhHHHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCeE
Confidence 111222 3333 333331 244788999999999888777543
No 105
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.77 E-value=0.00043 Score=64.35 Aligned_cols=148 Identities=14% Similarity=0.180 Sum_probs=92.9
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec---ccchhhhhhcCCeeEE----ecCChhhHHHHHHHHHcC-CeEE
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS---LSRLSELISPIKTVRL----TRDRATDASMIEKLLEKG-DLVI 380 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~---~~~~g~~~~~~~~i~i----dR~~~~~~~~~~~~l~~G-~l~I 380 (515)
..+|+|+..=|-=.+=.+.+.--. +.+..+... -.+...++..+|..-| +++...++..+.+.|++| ++.|
T Consensus 44 ~~~p~I~afWHg~l~l~p~~~~~~-~~~~amvS~s~DGEliA~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~~i~i 122 (214)
T COG2121 44 NEKPGIVAFWHGQLALGPFAFPKG-KKIYAMVSPSRDGELIARLLEKFGLRVIRGSSNKGGISALRALLKALKQGKSIAI 122 (214)
T ss_pred ccCCeEEEEeccccccchhhccCC-CcEEEEEcCCcCHHHHHHHHHHcCceEEeccCCcchHHHHHHHHHHHhCCCcEEE
Confidence 467999999887443222222111 223333222 2334445555665544 333334477889999999 9999
Q ss_pred ecCCeeeCCCccccccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccccccCCCCeEEEEEeccccCcccc
Q 042288 381 CPEGTTCREPFLLRFSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNPSPAYEVTFLNKLPYELTC 456 (515)
Q Consensus 381 FPEGTrs~~~~l~~Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~ 456 (515)
-|+|-+..- .+-..|. ...++||+||.+.+++ .+.-.+ |.-+ -+..|..++++.+++|+..+
T Consensus 123 tpDgPkGp~---~~~~~Gii~LA~~sg~pi~pv~~~~sr-~~~lKs---WDk~----~IP~PFgk~~i~~gePi~~~--- 188 (214)
T COG2121 123 TPDGPKGPV---HKIGDGIIALAQKSGVPIIPVGVATSR-CWRLKT---WDKT----IIPLPFGKIKIVLGEPIEVD--- 188 (214)
T ss_pred cCCCCCCCc---eeccchhhHhhHhcCCCeEEEEEeeee-eeeecc---cccc----cccCccceeEEEecCceeec---
Confidence 999977543 3345773 4568999999999986 443331 2211 35667777999999999887
Q ss_pred CCCCCHHHHHHHHHHH
Q 042288 457 SAGKSSHDVANYIQRL 472 (515)
Q Consensus 457 ~~~~~~~~la~~v~~~ 472 (515)
.+++.+++.++.++.
T Consensus 189 -~D~~~~~l~~~~~~~ 203 (214)
T COG2121 189 -ADKDKEELEEKRQEV 203 (214)
T ss_pred -ccccHHHHHHHHHHH
Confidence 367777776665543
No 106
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=97.75 E-value=0.0012 Score=61.46 Aligned_cols=110 Identities=18% Similarity=0.167 Sum_probs=61.8
Q ss_pred CCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhC-CCEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeee
Q 042288 95 GMKVPSIESVARAVLPKFYSGDLHPETWRVFSSC-GRRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTG 169 (515)
Q Consensus 95 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG 169 (515)
+.+.+++.+..++..... .-..++.+.+.++.- +..+|+|.++...++.+.+. +|+ |.+++++-.
T Consensus 64 ~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~-------- 133 (184)
T TIGR01993 64 EIDADEYLRYVHGRLPYE-KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTA-------- 133 (184)
T ss_pred CCCHHHHHHHHhccCCHH-hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecc--------
Confidence 455555554433321111 123567777877753 46788999999999999998 887 444444311
Q ss_pred EEecCCccccccHHHHHH---HHhcCCCCCceEEEeCCcCcHHHHhccccce
Q 042288 170 FVKSPGVLVGKNKAGALM---KMLGDDEEMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 170 ~i~~~~~~~g~~K~~~l~---~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
+..+....-+.+.++ +.++.. ...++.+|||..|+..=+.+|-..
T Consensus 134 ---~~~~~~~KP~p~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 134 ---NPDYLLPKPSPQAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ---cCccCCCCCCHHHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 100000011222333 333431 234788999999988877777654
No 107
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.74 E-value=0.00047 Score=69.74 Aligned_cols=157 Identities=14% Similarity=0.128 Sum_probs=100.8
Q ss_pred EEEE--cCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh-cCCCccEEEec--ccch-hhhh---hcCCeeEE--ecC
Q 042288 293 RVYI--KGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA-LGRPIPAVTYS--LSRL-SELI---SPIKTVRL--TRD 361 (515)
Q Consensus 293 rv~v--~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~-g~~~---~~~~~i~i--dR~ 361 (515)
++++ +|.|++...- ..++|+|+++.|.+++|....... .+.++..+.+. .+.+ ..+. ...|.-.+ +++
T Consensus 89 ~v~i~~~g~e~l~~a~-~~gkgvIllt~H~GnwE~~~~~l~~~~~~~~~vyr~~~n~~~~~~~~~~R~~~g~~~i~~~~~ 167 (298)
T PRK07920 89 RVRVSIEGLEHLDAAL-AAGRGVVLALPHSGNWDMAGAWLVQHHGPFTTVAERLKPESLYERFVAYRESLGFEVLPLTGG 167 (298)
T ss_pred hhhhccCCHHHHHHHH-hcCCCeEEEecCCCHHHHHHHHHHHcCCCeEEEEeccCCHHHHHHHHHHHHhcCCEEEecCCC
Confidence 5667 8888875210 035799999999999999764333 34567778775 2322 2221 23453344 322
Q ss_pred ChhhHHHHHHHHHcC-CeEEecCCeeeCCCcccc-------ccchh----hccCCcEEEEEEEcCccCccCcccCCCccC
Q 042288 362 RATDASMIEKLLEKG-DLVICPEGTTCREPFLLR-------FSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGM 429 (515)
Q Consensus 362 ~~~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~-------Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~ 429 (515)
....+..+.+.|++| .+.+.|..+...++...+ +.+|. ...++||+|+.+....
T Consensus 168 ~~~~~r~ii~~Lk~g~~v~il~Dq~~~~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r~~-------------- 233 (298)
T PRK07920 168 ERPPFEVLAERLRAGGVVCLLADRDLTRSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWFEG-------------- 233 (298)
T ss_pred CchHHHHHHHHHHcCCeEEEEeccCccCCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEEeC--------------
Confidence 234678899999999 899999998764444334 44552 4578999999986531
Q ss_pred CccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcC
Q 042288 430 DPFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLS 478 (515)
Q Consensus 430 ~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~ 478 (515)
.. ++|++.||++.. ..++..+.++++.+.+++...
T Consensus 234 ---------~~-y~v~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir 268 (298)
T PRK07920 234 ---------DG-WGFRVHPPLDVP----SAEDVAAMTQALADAFAANIA 268 (298)
T ss_pred ---------Ce-EEEEEeCCCCCC----chhHHHHHHHHHHHHHHHHHH
Confidence 11 678888998754 134556666666666666543
No 108
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=97.73 E-value=0.0003 Score=64.96 Aligned_cols=73 Identities=12% Similarity=0.147 Sum_probs=46.1
Q ss_pred CcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCc----EEEeceEEEeCceeeeEEecCCccccccH--HH---HHH
Q 042288 117 LHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGAD----MVIGTEICVYKGRSTGFVKSPGVLVGKNK--AG---ALM 187 (515)
Q Consensus 117 ~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid----~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~---~l~ 187 (515)
.+|.+.+.++ .+.|+|.+...+++...++ +|+. .+++++- + +..| .+ .+.
T Consensus 91 ~~~g~~~~L~---~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~-~----------------~~~KP~p~~f~~~~ 149 (175)
T TIGR01493 91 PWPDSAAALA---RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDT-V----------------RAYKPDPVVYELVF 149 (175)
T ss_pred CCCchHHHHH---HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhh-c----------------CCCCCCHHHHHHHH
Confidence 6788888887 3667899999999999997 8864 3444331 1 1112 12 222
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHH
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFL 211 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL 211 (515)
+.++.. ...++.+|||..|+.--
T Consensus 150 ~~~~~~-p~~~l~vgD~~~Di~~A 172 (175)
T TIGR01493 150 DTVGLP-PDRVLMVAAHQWDLIGA 172 (175)
T ss_pred HHHCCC-HHHeEeEecChhhHHHH
Confidence 233331 24478899999998643
No 109
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.72 E-value=7.1e-05 Score=82.34 Aligned_cols=89 Identities=21% Similarity=0.267 Sum_probs=69.7
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .++++| .++|+|+..+..++.++++ +|++ +++ ++ ..++|.+.++++
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-~~~-----------------~~-~p~~K~~~v~~l 462 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-VRA-----------------EV-LPDDKAALIKEL 462 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-EEc-----------------cC-ChHHHHHHHHHH
Confidence 4556776554 677899 6678999999999999998 9996 221 12 456799988887
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
..+ ...+.++||+.||.|+++.|+.+++++...
T Consensus 463 ~~~--~~~v~~VGDg~nD~~al~~A~vgia~g~g~ 495 (562)
T TIGR01511 463 QEK--GRVVAMVGDGINDAPALAQADVGIAIGAGT 495 (562)
T ss_pred HHc--CCEEEEEeCCCccHHHHhhCCEEEEeCCcC
Confidence 654 456788999999999999999999888543
No 110
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.71 E-value=0.0016 Score=61.69 Aligned_cols=87 Identities=17% Similarity=0.179 Sum_probs=50.0
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcC----CcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLG----ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lG----id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
++|++.+ .++++| ..+|+|.++...++.+...+.+ +|.++++.-. + .+.-+.+..+.
T Consensus 85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~-----------~----~~KP~p~~~~~ 149 (199)
T PRK09456 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDL-----------G----MRKPEARIYQH 149 (199)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEeccc-----------C----CCCCCHHHHHH
Confidence 5676666 556789 6678999988777655433123 3555554311 1 11112333333
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhccccce
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
.+...+ ...++.+|||..|+.--+.+|-..
T Consensus 150 ~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 150 VLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 332221 234788999999988777777644
No 111
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.68 E-value=0.00089 Score=67.31 Aligned_cols=93 Identities=15% Similarity=0.031 Sum_probs=53.6
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccH--HHHHHHH
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNK--AGALMKM 189 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~l~~~ 189 (515)
.++|.+.+ .++++| ...|+|++....++.+.+. ++.+.... .+.+ +++.. .+..| .+.+...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~-~~~~----v~~~~------~~~~KP~p~~~~~a 211 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERAQ-GLDV----FAGDD------VPKKKPDPDIYNLA 211 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hccccccC-ceEE----Eeccc------cCCCCCCHHHHHHH
Confidence 35666665 456789 6788999999988888776 43211110 0110 11111 12223 2233332
Q ss_pred hcCCC--CCceEEEeCCcCcHHHHhccccceee
Q 042288 190 LGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 190 ~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
+...+ ...++.+|||.+|+..-+.+|-.++.
T Consensus 212 ~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~ 244 (286)
T PLN02779 212 AETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIV 244 (286)
T ss_pred HHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEE
Confidence 22211 23478899999999999999977654
No 112
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.67 E-value=0.00012 Score=84.49 Aligned_cols=90 Identities=21% Similarity=0.243 Sum_probs=70.8
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .++++| .++++|+..+..++.++++ +|++++++. + ..++|.+.++++
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~-----------------~-~p~~K~~~i~~l 708 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAG-----------------V-LPDGKAEAIKRL 708 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeC-----------------C-CHHHHHHHHHHH
Confidence 4456666555 667899 5677999999999999998 999865541 2 355799999987
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
... ...++++||+.||.|+|+.|+.+++.+...
T Consensus 709 ~~~--~~~v~~vGDg~nD~~al~~Agvgia~g~g~ 741 (834)
T PRK10671 709 QSQ--GRQVAMVGDGINDAPALAQADVGIAMGGGS 741 (834)
T ss_pred hhc--CCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence 543 345788999999999999999999998644
No 113
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.64 E-value=0.00011 Score=68.80 Aligned_cols=83 Identities=19% Similarity=0.151 Sum_probs=62.7
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--Cc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~ 197 (515)
+++.++++| .++|+|+.+...+++++++ +|+++++. + ++.|...++.++...+. ..
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---------------g-----~~~k~~~l~~~~~~~gl~~~e 114 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---------------G-----QSNKLIAFSDLLEKLAIAPEQ 114 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---------------C-----CCcHHHHHHHHHHHhCCCHHH
Confidence 455666789 5678999999999999998 99876532 1 12477777777665332 34
Q ss_pred eEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
++++|||.+|+++++.++.+++++...
T Consensus 115 v~~VGDs~~D~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 115 VAYIGDDLIDWPVMEKVGLSVAVADAH 141 (183)
T ss_pred EEEECCCHHHHHHHHHCCCeEecCChh
Confidence 788999999999999999999886533
No 114
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.63 E-value=0.00042 Score=65.22 Aligned_cols=183 Identities=17% Similarity=0.164 Sum_probs=106.1
Q ss_pred EEEecCCccccCCCchHHHHHHHHHhccHHHHHHHHhhhHHHHHhc---cc-CcccHHHHHHH-HHHHcCCCHHHHHHHH
Q 042288 31 VVADVDGTLLRGRSSFPYFALVAFEVGGVLRLLLLLLLSPLAGFLY---YY-VSESAGIRVLI-FATFAGMKVPSIESVA 105 (515)
Q Consensus 31 avFD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~l-~~~~~~~~~~~-~~~~~G~~~~~l~~~~ 105 (515)
.+||++|-+...|-.+...... +.+++ +.+..+..+ -.++.+ +- +.....++-.. ...-.|.+.++++++.
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~~-~pngr--rfF~~~Sey-DD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~s 78 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAAV-FPNGR--RFFSNLSEY-DDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRIS 78 (315)
T ss_pred ccccCCCCCccchhHHHHHHHH-cCCHH--HHHHhhhhh-hhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHH
Confidence 6899999999987766555433 22222 222221122 111111 10 11111233221 2345799999999888
Q ss_pred HHHhchhhcCCCcHHHHHHHHhCC---CEEEEecCcHHHHHHHHHhhcCC--cEEEeceEEEeC-----c-e--------
Q 042288 106 RAVLPKFYSGDLHPETWRVFSSCG---RRCVLTANPRIMVEAFLKDFLGA--DMVIGTEICVYK-----G-R-------- 166 (515)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~G---~~vivSaS~~~~v~~ia~~~lGi--d~vigt~l~~~~-----G-~-------- 166 (515)
+.-+. +-|.+-+.++..+ ..+|+|.|...+++.+|.. +|+ .++-||++..++ + +
T Consensus 79 E~sa~------lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~ 151 (315)
T COG4030 79 ELSAK------LVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGVPRGELHGTEVDLDSIAVPEEEREELLSIID 151 (315)
T ss_pred Hhhcc------cCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCCCccccccccccCccccCChHHHHHHHHhcC
Confidence 77544 4466777666544 3488999999999999997 998 478899887652 1 1
Q ss_pred ----eeeE------------E---------ecCCccccccHHHHHHHHhcCCCCCce-EEEeCCcCcHHHHhccc----c
Q 042288 167 ----STGF------------V---------KSPGVLVGKNKAGALMKMLGDDEEMPD-IGLGDRKTDSLFLNLCK----E 216 (515)
Q Consensus 167 ----~tG~------------i---------~~~~~~~g~~K~~~l~~~~~~~~~~~~-~aygDS~~DlpmL~~a~----~ 216 (515)
+.|. + ++-...-|.+|++-++.....++...+ ...|||.+|..||+.+. .
T Consensus 152 ~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGgl 231 (315)
T COG4030 152 VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGL 231 (315)
T ss_pred ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCce
Confidence 0111 0 010111344566666666555433333 66799999999999763 4
Q ss_pred ceeeCCCC
Q 042288 217 SYMVPPNP 224 (515)
Q Consensus 217 ~~~Vnp~~ 224 (515)
+++.|-+.
T Consensus 232 AvaFNGNe 239 (315)
T COG4030 232 AVAFNGNE 239 (315)
T ss_pred EEEecCCc
Confidence 45555444
No 115
>PRK09449 dUMP phosphatase; Provisional
Probab=97.61 E-value=0.0037 Score=60.06 Aligned_cols=89 Identities=15% Similarity=0.076 Sum_probs=53.7
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+|.+.+ .++ +| .+.|+|.+....++...++ +|+ |.+++++-. + + ..-+.+.+..
T Consensus 96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~-----------~--~--~KP~p~~~~~ 158 (224)
T PRK09449 96 PLPGAVELLNALR-GKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQV-----------G--V--AKPDVAIFDY 158 (224)
T ss_pred cCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECcc-----------C--C--CCCCHHHHHH
Confidence 4555554 555 57 5678999998888888887 886 444443310 0 0 1112223333
Q ss_pred HhcCCC---CCceEEEeCCc-CcHHHHhccccc-eeeCC
Q 042288 189 MLGDDE---EMPDIGLGDRK-TDSLFLNLCKES-YMVPP 222 (515)
Q Consensus 189 ~~~~~~---~~~~~aygDS~-~DlpmL~~a~~~-~~Vnp 222 (515)
.+...+ ...++.+|||. +|+..=+.+|-. +.++.
T Consensus 159 ~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 159 ALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred HHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 322221 23478899998 799999998876 45554
No 116
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.57 E-value=0.00062 Score=61.40 Aligned_cols=80 Identities=13% Similarity=0.180 Sum_probs=47.0
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhc-C--CcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFL-G--ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~l-G--id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
.++++.++++| ...|+|++....++.+.+. + + ++.+++.+ .+ .+.-+.+.+...+...+
T Consensus 70 ~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~l~~~f~~i~~~~---------------~~-~~Kp~~~~~~~~~~~~~ 132 (154)
T TIGR01549 70 ADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-HLGDYFDLILGSD---------------EF-GAKPEPEIFLAALESLG 132 (154)
T ss_pred HHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-HHHhcCcEEEecC---------------CC-CCCcCHHHHHHHHHHcC
Confidence 45566777889 5678999999999888886 4 1 22233221 11 11112333433333211
Q ss_pred C-CceEEEeCCcCcHHHHhccc
Q 042288 195 E-MPDIGLGDRKTDSLFLNLCK 215 (515)
Q Consensus 195 ~-~~~~aygDS~~DlpmL~~a~ 215 (515)
. ..++.+|||.+|+..-+.+|
T Consensus 133 ~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 133 LPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCCCEEEEeCCHHHHHHHHHcc
Confidence 1 25788999999988766553
No 117
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.56 E-value=0.00014 Score=67.13 Aligned_cols=90 Identities=16% Similarity=0.116 Sum_probs=66.2
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--Cc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MP 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~ 197 (515)
++..++++| ...|+|+.....++.+++. +|+.+++... . .|.+.++.++...+. ..
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-------------k-------pkp~~~~~~~~~l~~~~~e 100 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-------------K-------KKTEPYAQMLEEMNISDAE 100 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-------------C-------CCHHHHHHHHHHcCcCHHH
Confidence 455677789 5678999999999999998 9997555310 1 244555555444222 34
Q ss_pred eEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
++++|||.+|++|++.++.++++. ..+.++..|.
T Consensus 101 v~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~ 135 (169)
T TIGR02726 101 VCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAA 135 (169)
T ss_pred EEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCC
Confidence 788999999999999999999985 5667777765
No 118
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.55 E-value=0.00021 Score=79.68 Aligned_cols=95 Identities=21% Similarity=0.288 Sum_probs=77.1
Q ss_pred hcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 113 YSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 113 ~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
+.+.+++++.+ .||++| +++++||=.+.-++.+|++ ||||++.+- + ..++|++.+++
T Consensus 534 ~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Ae-----------------l-lPedK~~~V~~ 594 (713)
T COG2217 534 LADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAE-----------------L-LPEDKAEIVRE 594 (713)
T ss_pred EeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhhecc-----------------C-CcHHHHHHHHH
Confidence 45677777665 677899 7677999999999999999 999977762 3 57889999999
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCc
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDP 228 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~ 228 (515)
+-.+ .......||+.||-|-|..|+-+++++-......
T Consensus 595 l~~~--g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~ 632 (713)
T COG2217 595 LQAE--GRKVAMVGDGINDAPALAAADVGIAMGSGTDVAI 632 (713)
T ss_pred HHhc--CCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHH
Confidence 8754 3456778999999999999999999987444443
No 119
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.50 E-value=0.0018 Score=62.31 Aligned_cols=93 Identities=24% Similarity=0.249 Sum_probs=53.2
Q ss_pred CCcHHHHHHHHhCC-C--EEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceeeeEEecCCccccccHH-HHHH
Q 042288 116 DLHPETWRVFSSCG-R--RCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRSTGFVKSPGVLVGKNKA-GALM 187 (515)
Q Consensus 116 ~~~~~~~~~l~~~G-~--~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~-~~l~ 187 (515)
..++++++.+++.+ + .+|+|=+.....+...++ +|+ |.++.+.-. | ...|. .+. +.+.
T Consensus 99 ~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~-------g-~~KP~-----~~~f~~~~ 164 (229)
T COG1011 99 PDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDV-------G-VAKPD-----PEIFEYAL 164 (229)
T ss_pred ccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEeccc-------c-cCCCC-----cHHHHHHH
Confidence 46788998888644 4 577999888888888888 885 555554421 1 11111 111 1233
Q ss_pred HHhcCCCCCceEEEeCC-cCcHHHHhcccc-ceeeCCC
Q 042288 188 KMLGDDEEMPDIGLGDR-KTDSLFLNLCKE-SYMVPPN 223 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS-~~DlpmL~~a~~-~~~Vnp~ 223 (515)
+.++.. ...++.+||| .||+.--+.+|- .+.+|..
T Consensus 165 ~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~ 201 (229)
T COG1011 165 EKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRG 201 (229)
T ss_pred HHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCC
Confidence 334431 2447889999 577444444443 4455543
No 120
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.50 E-value=0.00026 Score=78.81 Aligned_cols=97 Identities=11% Similarity=0.136 Sum_probs=76.1
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .+|+.| +++++||-...-++.+|++ +|+|++++ .+ ..++|.+.++++
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~v~A-----------------~~-~PedK~~iV~~l 503 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFLA-----------------EA-TPEDKLALIRQE 503 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcEEEc-----------------cC-CHHHHHHHHHHH
Confidence 4456666555 677899 6777999999999999999 99987544 24 688999999997
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
-.+ .......||+.||-|.|+.|+-+++.+......+-|.
T Consensus 504 Q~~--G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAA 543 (679)
T PRK01122 504 QAE--GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAG 543 (679)
T ss_pred HHc--CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC
Confidence 654 3445567999999999999999999995545555444
No 121
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.47 E-value=0.0016 Score=76.74 Aligned_cols=85 Identities=13% Similarity=0.089 Sum_probs=54.5
Q ss_pred CcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-----EEEeceEEEeCceeeeEEecCCccccccH--HHH
Q 042288 117 LHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-----MVIGTEICVYKGRSTGFVKSPGVLVGKNK--AGA 185 (515)
Q Consensus 117 ~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-----~vigt~l~~~~G~~tG~i~~~~~~~g~~K--~~~ 185 (515)
.+|.+.+ +++++| ..+|+|.+....++...+. +|++ .+++.+- .+..| .+.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~-----------------~~~~KP~Pe~ 223 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADA-----------------FENLKPAPDI 223 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcc-----------------cccCCCCHHH
Confidence 4566555 667899 6788999999999999887 8863 3333221 11112 233
Q ss_pred HHHHhcCCC--CCceEEEeCCcCcHHHHhcccccee
Q 042288 186 LMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 186 l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+...+...+ ...++.+|||.+|+..-+.+|-..+
T Consensus 224 ~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I 259 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCI 259 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 333222211 3447889999999999999887544
No 122
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.45 E-value=0.00016 Score=79.12 Aligned_cols=88 Identities=19% Similarity=0.261 Sum_probs=68.8
Q ss_pred cCCCcHHHHH---HHHhCCC-E-EEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCGR-R-CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G~-~-vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+.++|++.+ .++++|. . +|+|+.++..++.++++ +|++++++ .+ ..++|.+.+++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~-----------------~~-~p~~K~~~i~~ 420 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHA-----------------EL-LPEDKLEIVKE 420 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhh-----------------cc-CcHHHHHHHHH
Confidence 3446666555 6778896 4 67999999999999998 99986543 12 45679998888
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
+..+ ...+.++||+.||.|+++.|+.++.+..
T Consensus 421 l~~~--~~~v~~vGDg~nD~~al~~A~vgia~g~ 452 (536)
T TIGR01512 421 LREK--YGPVAMVGDGINDAPALAAADVGIAMGA 452 (536)
T ss_pred HHhc--CCEEEEEeCCHHHHHHHHhCCEEEEeCC
Confidence 7554 4567889999999999999999999873
No 123
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.38 E-value=0.0016 Score=65.78 Aligned_cols=161 Identities=16% Similarity=0.118 Sum_probs=107.3
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCC-ccEEEec--ccchhhhhhc----CCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRP-IPAVTYS--LSRLSELISP----IKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~-~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~~ 365 (515)
+++++|.|++...-+ .++|+|+++-|...+|..........+ +..+.+. .|.+-+++.. .|.-.+++.. ..
T Consensus 106 ~~~v~g~e~l~e~l~-~~~gvIl~~~H~gn~E~~~~~l~~~~~~~~~~yrp~~np~ld~~i~~~R~r~~~~~~~~~~-~~ 183 (308)
T COG1560 106 RVEVEGLEHLEEALA-NGRGVILVTPHFGNWELGGRALAQQGPKVTAMYRPPKNPLLDWLITRGRERFGGRLLPRKG-EG 183 (308)
T ss_pred eeeecCHHHHHHHHH-cCCCEEEEecCcchHHHHHHHHHHhCCCeeEEecCCCCHHHHHHHHHHHHhcCCcccCCCc-hh
Confidence 688999999752111 457999999999999998876654333 3566665 6776665542 3333444433 56
Q ss_pred HHHHHHHHHcC-CeEEecCCeeeCCCc-ccccc-------chh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTCREPF-LLRFS-------ALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs~~~~-l~~Fk-------~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
++.+.+.|++| .+++-|+=..+.+.. -.||= +|. ...+++|+|+......
T Consensus 184 ir~li~~Lk~G~~v~~lpDqd~~~~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~r~~----------------- 246 (308)
T COG1560 184 IRQLIKALKQGEAVGYLPDQDYGPGESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPVRNP----------------- 246 (308)
T ss_pred HHHHHHHHhcCCeEEEecCcccCCCCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEEEeC-----------------
Confidence 88899999999 889999988886655 34441 221 3468999999877631
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
++..+++++.||..-. ...|.++.++++-+.|++......
T Consensus 247 -----~g~~y~l~i~p~~~~~----~~~D~~~~a~~mn~~~E~~I~~~P 286 (308)
T COG1560 247 -----DGSGYTLHIHPPMTDD----PSEDVEADAQRMNDFVEKWIRAHP 286 (308)
T ss_pred -----CCCeEEEEEeccccCC----CCCCHHHHHHHHHHHHHHHHHcCh
Confidence 1234889999876544 256666766666666665443333
No 124
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.34 E-value=0.00048 Score=75.80 Aligned_cols=88 Identities=20% Similarity=0.260 Sum_probs=68.9
Q ss_pred cCCCcHHHHH---HHHhCC-CE-EEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RR-CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~-vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+.++|++.+ .++++| .. +|+|+.+...++.++++ +|++++++. + ..++|.+.+++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~-----------------~-~p~~K~~~v~~ 442 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAE-----------------L-LPEDKLAIVKE 442 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeecc-----------------C-CHHHHHHHHHH
Confidence 3456776655 666788 64 67999999999999998 999865541 2 45679888888
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
+... ...+.++||+.||.|+++.|+-+++++.
T Consensus 443 l~~~--~~~v~~vGDg~nD~~al~~A~vgia~g~ 474 (556)
T TIGR01525 443 LQEE--GGVVAMVGDGINDAPALAAADVGIAMGA 474 (556)
T ss_pred HHHc--CCEEEEEECChhHHHHHhhCCEeEEeCC
Confidence 7654 3467889999999999999998888874
No 125
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.32 E-value=0.0007 Score=75.37 Aligned_cols=97 Identities=10% Similarity=0.090 Sum_probs=75.2
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.++|++.+ .+|+.| +++++||-...-++.+|++ +|+|++++ .+ ..++|.+.++++
T Consensus 439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~A-----------------~~-~PedK~~iV~~l 499 (673)
T PRK14010 439 KDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFVA-----------------EC-KPEDKINVIREE 499 (673)
T ss_pred ecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEEc-----------------CC-CHHHHHHHHHHH
Confidence 4456776655 677899 6777999999999999999 99987554 24 678999999987
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
-.+ .......||+.||-|-|+.|+-+++++......+-|.
T Consensus 500 Q~~--G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAA 539 (673)
T PRK14010 500 QAK--GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAA 539 (673)
T ss_pred HhC--CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhC
Confidence 654 3334456999999999999999999995444554444
No 126
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.29 E-value=0.0025 Score=62.13 Aligned_cols=82 Identities=15% Similarity=0.044 Sum_probs=54.6
Q ss_pred HHHHHHHHhCC-CEEEEec----CcHHHHHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 119 PETWRVFSSCG-RRCVLTA----NPRIMVEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSa----S~~~~v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
.+.++.|+++| .+++||+ ..+..++.+.+. +|+ +..+- + .++|.. . ....|...+++
T Consensus 120 ~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~--v-----il~gd~----~-~K~~K~~~l~~--- 183 (237)
T PRK11009 120 RQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNP--V-----IFAGDK----P-GQYTKTQWLKK--- 183 (237)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCccccee--E-----EEcCCC----C-CCCCHHHHHHh---
Confidence 34555677899 5677998 467889999987 898 64331 1 122211 1 23457665542
Q ss_pred CCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 192 DDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 192 ~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
...++.||||.+|+..-+.||-..+
T Consensus 184 ---~~i~I~IGDs~~Di~aA~~AGi~~I 208 (237)
T PRK11009 184 ---KNIRIFYGDSDNDITAAREAGARGI 208 (237)
T ss_pred ---cCCeEEEcCCHHHHHHHHHcCCcEE
Confidence 2347889999999999888887754
No 127
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=97.11 E-value=0.015 Score=56.68 Aligned_cols=29 Identities=21% Similarity=0.197 Sum_probs=21.7
Q ss_pred CceEEEeCC-cCcHHHHhccccc-eeeCCCC
Q 042288 196 MPDIGLGDR-KTDSLFLNLCKES-YMVPPNP 224 (515)
Q Consensus 196 ~~~~aygDS-~~DlpmL~~a~~~-~~Vnp~~ 224 (515)
..++.+||| ..|+.-=+.+|-. +.|++..
T Consensus 181 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~ 211 (238)
T PRK10748 181 GEILHVGDDLTTDVAGAIRCGMQACWINPEN 211 (238)
T ss_pred hHEEEEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence 347889999 5999998888854 4466643
No 128
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.09 E-value=0.0051 Score=60.44 Aligned_cols=48 Identities=21% Similarity=0.183 Sum_probs=34.8
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeCC-CCC
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVPP-NPK 225 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~ 225 (515)
.+.+|-.+++-+....+ ...+++.|||-||++||..+..+++|.+ +++
T Consensus 162 ~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 46678888777665432 2347889999999999999999999964 455
No 129
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.08 E-value=0.0013 Score=75.91 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=74.2
Q ss_pred CCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc---EEEeceEEEe-Cceeee-----EEecCCccccccH
Q 042288 116 DLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD---MVIGTEICVY-KGRSTG-----FVKSPGVLVGKNK 182 (515)
Q Consensus 116 ~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid---~vigt~l~~~-~G~~tG-----~i~~~~~~~g~~K 182 (515)
..+++ +++.++++| +++++||-...-++.+|++ +|++ .+.|.+++.- +..+.. .+-. .+ .-++|
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA-r~-~Pe~K 591 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDANDFLLGADIEELSDEELARELRKYHIFA-RL-TPMQK 591 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE-EC-CHHHH
Confidence 34554 445677899 6677999999999999999 9995 2333333211 111110 1111 13 56889
Q ss_pred HHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 183 AGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 183 ~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
.+-++.+-.. .+.....||+.||.|.|+.|+-+++++......+-|.
T Consensus 592 ~~iV~~lq~~--G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aA 638 (867)
T TIGR01524 592 SRIIGLLKKA--GHTVGFLGDGINDAPALRKADVGISVDTAADIAKEAS 638 (867)
T ss_pred HHHHHHHHhC--CCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhC
Confidence 9988887544 3445667999999999999999999995444544443
No 130
>PRK10976 putative hydrolase; Provisional
Probab=97.03 E-value=0.00031 Score=69.58 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=44.2
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...|+.++...+. ..++|+|||.||++||+.|+.++++ |.++++++.|.
T Consensus 187 ~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 243 (266)
T PRK10976 187 GGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLP 243 (266)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCC
Confidence 577899999988765433 2379999999999999999999998 56778888763
No 131
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.01 E-value=0.011 Score=57.02 Aligned_cols=94 Identities=17% Similarity=0.118 Sum_probs=57.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCce
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPD 198 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~ 198 (515)
+.++.++++| ..+++|+|+...++.+.+. +|+.+.+..-+.-+ ....| .|+ .+-=..+.++ ++- ....|
T Consensus 93 ~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~-dv~~~---KP~---Pd~yL~Aa~~-Lgv-~P~~C 162 (221)
T COG0637 93 ELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTAD-DVARG---KPA---PDIYLLAAER-LGV-DPEEC 162 (221)
T ss_pred HHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccHH-HHhcC---CCC---CHHHHHHHHH-cCC-ChHHe
Confidence 4555777888 5677899999999999988 88643333221110 00111 111 1111223333 222 13558
Q ss_pred EEEeCCcCcHHHHhccccceeeCCC
Q 042288 199 IGLGDRKTDSLFLNLCKESYMVPPN 223 (515)
Q Consensus 199 ~aygDS~~DlpmL~~a~~~~~Vnp~ 223 (515)
+++-||.+.+.--+.||-.++.-++
T Consensus 163 vviEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 163 VVVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEEecchhHHHHHHHCCCEEEEecC
Confidence 9999999999999999988876554
No 132
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.00 E-value=0.00032 Score=69.59 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=44.6
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|..+|+.++...+. ..++|+|||.||++||+.|++++++ |..+++++.|.
T Consensus 193 ~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 249 (270)
T PRK10513 193 KRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQ 249 (270)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcC
Confidence 577899999988765433 2479999999999999999999999 56777888776
No 133
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.99 E-value=0.012 Score=55.88 Aligned_cols=22 Identities=9% Similarity=-0.194 Sum_probs=17.6
Q ss_pred ceEEEeCCcCcHHHHhccccce
Q 042288 197 PDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 197 ~~~aygDS~~DlpmL~~a~~~~ 218 (515)
.++.+||+..|+..=+.+|-..
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEE
Confidence 3677899999999888777654
No 134
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=96.89 E-value=0.0065 Score=61.26 Aligned_cols=163 Identities=13% Similarity=0.151 Sum_probs=104.5
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh-cCCCccEEEec--ccchhhhh----hcCCeeEEecCCh
Q 042288 291 GVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA-LGRPIPAVTYS--LSRLSELI----SPIKTVRLTRDRA 363 (515)
Q Consensus 291 Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~g~~~----~~~~~i~idR~~~ 363 (515)
..+++++|.|++...- ..++|+|+++-|...+|....... ...++..+.+. .+.+-.++ ...|.-.+++++.
T Consensus 102 ~~~~~~~g~e~l~~a~-~~g~gvIl~t~H~GnwE~~~~~l~~~~~~~~~i~~~~~n~~~~~~~~~~R~~~g~~~i~~~~~ 180 (295)
T PF03279_consen 102 KKRVEIEGEEHLEAAL-AEGRGVILLTGHFGNWELAGRALARRGPPVAVIYRPQKNPYIDRLLNKLRERFGIELIPKGEG 180 (295)
T ss_pred ceEEEEECHHHHHHHH-hcCCCCEEeCcCcChHHHHHHHHHhhCCceEEEecCCccHhHHHHHHHHHHhcCCeEecchhh
Confidence 3478899998875111 146799999999999998654332 33455555554 34444333 2345555665533
Q ss_pred hhHHHHHHHHHcC-CeEEecCCeeeCC-Cccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCC
Q 042288 364 TDASMIEKLLEKG-DLVICPEGTTCRE-PFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMD 430 (515)
Q Consensus 364 ~~~~~~~~~l~~G-~l~IFPEGTrs~~-~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~ 430 (515)
+..+.+.|++| .+++.+....... +.-.+| ..|. ...++||+||.......
T Consensus 181 --~~~~~~~Lk~g~~v~~l~Dq~~~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~~-------------- 244 (295)
T PF03279_consen 181 --IRELIRALKEGGIVGLLGDQDPGKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREPD-------------- 244 (295)
T ss_pred --HHHHHHHhccCCEEEEEECCCCCCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeCC--------------
Confidence 77888999999 8889888755433 333344 3341 45789999999876421
Q ss_pred ccccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 042288 431 PFYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECT 482 (515)
Q Consensus 431 ~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t 482 (515)
+..+++++.||++... .++.+++++.+-+.+++.......
T Consensus 245 --------~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~lE~~Ir~~P~ 284 (295)
T PF03279_consen 245 --------GSHYRIEIEPPLDFPS----SEDIEELTQRYNDRLEEWIREHPE 284 (295)
T ss_pred --------CCEEEEEEeecccCCc----cchHHHHHHHHHHHHHHHHHcChH
Confidence 1137888889987762 446677777777777765544443
No 135
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.89 E-value=0.00051 Score=68.02 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=43.5
Q ss_pred ccccHHHHHHHHhcCCCCC--ceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|..+|+.++...+.. .++|+|||.||++||+.|+++|++ |.++.++.+|.
T Consensus 186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~ 242 (264)
T COG0561 186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD 242 (264)
T ss_pred CCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence 6778988888876643332 479999999999999999999998 56677877775
No 136
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.86 E-value=0.0079 Score=67.26 Aligned_cols=98 Identities=16% Similarity=0.216 Sum_probs=78.6
Q ss_pred hcCCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 113 YSGDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 113 ~~~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
+.+..+|++- +.|++.| +++++||-.+.-++.+|++ +|+|.|+|.- ..++|.+.+|+
T Consensus 720 l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VGi~~V~aev------------------~P~~K~~~Ik~ 780 (951)
T KOG0207|consen 720 LEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VGIDNVYAEV------------------LPEQKAEKIKE 780 (951)
T ss_pred eccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hCcceEEecc------------------CchhhHHHHHH
Confidence 3556676654 5788999 6778999999999999999 9999888732 45678888888
Q ss_pred HhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 189 MLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 189 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
+..+ .....-.||+.||-|=|..|+-.++++....++.-|.
T Consensus 781 lq~~--~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaA 821 (951)
T KOG0207|consen 781 IQKN--GGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAA 821 (951)
T ss_pred HHhc--CCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhC
Confidence 8765 3556678999999999999999999998865655444
No 137
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.83 E-value=0.0045 Score=54.39 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=24.8
Q ss_pred HHHHHHHHhCC-CEEEEecC-cHHHHHHHHHhhcC
Q 042288 119 PETWRVFSSCG-RRCVLTAN-PRIMVEAFLKDFLG 151 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS-~~~~v~~ia~~~lG 151 (515)
.++++.++++| ..+|+|++ ...++..+.+. +|
T Consensus 35 ~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~ 68 (128)
T TIGR01681 35 RDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FE 68 (128)
T ss_pred HHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-cc
Confidence 35566777889 56789999 88888888886 66
No 138
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.80 E-value=0.0018 Score=62.03 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=56.7
Q ss_pred EecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCC--ceEEEeCCcCcHHHH
Q 042288 134 LTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEM--PDIGLGDRKTDSLFL 211 (515)
Q Consensus 134 vSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL 211 (515)
++......++.+.+. .|+..+.+ +.. -.+.. .|..|...++..+...+.. ..+++|||.||++||
T Consensus 113 ~~~~~~~~~~~~l~~-~~~~~~~~-------~~~-~ei~~----~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml 179 (215)
T TIGR01487 113 REGKDVDEVREIIKE-RGLNLVDS-------GFA-IHIMK----KGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLF 179 (215)
T ss_pred cCCccHHHHHHHHHh-CCeEEEec-------Cce-EEEec----CCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 455555566666676 66553221 111 12221 4667888888876643322 378999999999999
Q ss_pred hccccceee-CCCCCCCcccc
Q 042288 212 NLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 212 ~~a~~~~~V-np~~~l~~~A~ 231 (515)
+.++.++++ |..++++++|.
T Consensus 180 ~~ag~~vam~na~~~~k~~A~ 200 (215)
T TIGR01487 180 RVVGFKVAVANADDQLKEIAD 200 (215)
T ss_pred HhCCCeEEcCCccHHHHHhCC
Confidence 999999998 56777887775
No 139
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.79 E-value=0.0031 Score=62.44 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=41.7
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.++...+. ..++++|||.||++|++.|+.++++ |..+.+++.|.
T Consensus 196 ~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad 252 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARAD 252 (272)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCC
Confidence 466799888888765432 2479999999999999999999988 55666765554
No 140
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.78 E-value=0.00051 Score=68.35 Aligned_cols=54 Identities=20% Similarity=0.250 Sum_probs=44.3
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...|+.++...+. ..++|+|||.||++||+.|+.++++ |..+++++.|.
T Consensus 185 ~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~ 241 (272)
T PRK15126 185 VGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELP 241 (272)
T ss_pred CCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCC
Confidence 567899999988766433 2479999999999999999999998 56777887765
No 141
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.78 E-value=0.0046 Score=70.28 Aligned_cols=88 Identities=17% Similarity=0.264 Sum_probs=68.4
Q ss_pred cCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHH
Q 042288 114 SGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 114 ~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~ 189 (515)
.+.+++++.+ .+++.| .++++||.....++.++++ +|++. .+ ++ ..++|.+.++++
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~-~~-----------------~~-~p~~K~~~v~~l 625 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDF-RA-----------------GL-LPEDKVKAVTEL 625 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCe-ec-----------------CC-CHHHHHHHHHHH
Confidence 4566776665 667899 6678999999999999998 99972 11 13 466899999887
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCC
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNP 224 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 224 (515)
-. .+.+...||+.||.|+|+.|+-++++....
T Consensus 626 ~~---~~~v~mvGDgiNDapAl~~A~vgia~g~~~ 657 (741)
T PRK11033 626 NQ---HAPLAMVGDGINDAPAMKAASIGIAMGSGT 657 (741)
T ss_pred hc---CCCEEEEECCHHhHHHHHhCCeeEEecCCC
Confidence 53 245677899999999999999999987443
No 142
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.74 E-value=0.0031 Score=60.62 Aligned_cols=89 Identities=18% Similarity=0.127 Sum_probs=57.2
Q ss_pred EEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--CceEEEeCCcCcHH
Q 042288 132 CVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSL 209 (515)
Q Consensus 132 vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~Dlp 209 (515)
.+.+......++.+.++ ++.+.... ..+ ..-.+.. .+..|...|+..+...+. ..++++|||.||++
T Consensus 111 ~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~-~~~ei~~----~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~ 179 (225)
T TIGR01482 111 KMRYGIDVDTVREIIKE-LGLNLVAV-----DSG-FDIHILP----QGVNKGVAVKKLKEKLGIKPGETLVCGDSENDID 179 (225)
T ss_pred EEeecCCHHHHHHHHHh-cCceEEEe-----cCC-cEEEEee----CCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHH
Confidence 34333344456667776 77542111 111 1223332 456788888877654322 34789999999999
Q ss_pred HHhccccceee-CCCCCCCcccc
Q 042288 210 FLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 210 mL~~a~~~~~V-np~~~l~~~A~ 231 (515)
||+.++.++++ |.+++++..|.
T Consensus 180 m~~~ag~~vam~Na~~~~k~~A~ 202 (225)
T TIGR01482 180 LFEVPGFGVAVANAQPELKEWAD 202 (225)
T ss_pred HHHhcCceEEcCChhHHHHHhcC
Confidence 99999999998 56777887775
No 143
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.68 E-value=0.0039 Score=55.74 Aligned_cols=90 Identities=20% Similarity=0.208 Sum_probs=67.1
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCc--
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMP-- 197 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~-- 197 (515)
+++.+.+.| .+.|+||=....|+.=++. ||+++++= --.+|..++++++.+.+..+
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q--------------------G~~dK~~a~~~L~~~~~l~~e~ 101 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ--------------------GISDKLAAFEELLKKLNLDPEE 101 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee--------------------chHhHHHHHHHHHHHhCCCHHH
Confidence 455666778 7789999999999999998 99986431 11358888777766533322
Q ss_pred eEEEeCCcCcHHHHhccccceeeCC-CCCCCcccc
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVSQ 231 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 231 (515)
+.+.||..+|+|+++.++-++++.. ++.++..|.
T Consensus 102 ~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~ 136 (170)
T COG1778 102 VAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRAD 136 (170)
T ss_pred hhhhcCccccHHHHHHcCCcccccccCHHHHHhhH
Confidence 4556999999999999999999964 666666554
No 144
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.62 E-value=0.00066 Score=65.73 Aligned_cols=54 Identities=22% Similarity=0.259 Sum_probs=42.1
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
.+..|...++.++...+ ...++++|||.||++||+.+++++++. ..+.++++|.
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~ 239 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD 239 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence 45578888888764322 245799999999999999999999995 4667888776
No 145
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.61 E-value=0.0047 Score=71.98 Aligned_cols=105 Identities=18% Similarity=0.133 Sum_probs=66.9
Q ss_pred CCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeee------------------EEec
Q 042288 116 DLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTG------------------FVKS 173 (515)
Q Consensus 116 ~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG------------------~i~~ 173 (515)
..+++ +++.++++| +++++||-....+..+|++ +|+.. .+-.+.+-.++| .+-.
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~---~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~a 612 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFS---PDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFS 612 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCC---CCccccceeeeHHHHhhCCHHHHHHhhhcCeEEE
Confidence 34554 455777899 6778999998999999998 99841 000000001111 1111
Q ss_pred CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCc
Q 042288 174 PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDP 228 (515)
Q Consensus 174 ~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~ 228 (515)
.+ ..++|.+.++.+- .. .+.+.+.||+.||.|||+.|+.+++++......+
T Consensus 613 -r~-~P~~K~~iV~~lq-~~-g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak 663 (917)
T TIGR01116 613 -RV-EPSHKSELVELLQ-EQ-GEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAK 663 (917)
T ss_pred -ec-CHHHHHHHHHHHH-hc-CCeEEEecCCcchHHHHHhCCeeEECCCCcHHHH
Confidence 12 4567877777553 32 2344558999999999999999999974434433
No 146
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.61 E-value=0.013 Score=68.13 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=67.0
Q ss_pred CCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-----EEeceEEEeCc-eee-----eEEecCCccccc
Q 042288 116 DLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-----VIGTEICVYKG-RST-----GFVKSPGVLVGK 180 (515)
Q Consensus 116 ~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-----vigt~l~~~~G-~~t-----G~i~~~~~~~g~ 180 (515)
.+++++. +.++++| +++++||-...-++.+|++ +|++. +-|.+++--++ .+. -.+-. .+ ..+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfa-r~-~P~ 604 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFA-RA-SPE 604 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEE-EC-CHH
Confidence 4565554 4677899 6778999999999999999 99852 11222211000 000 01111 12 567
Q ss_pred cHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 181 NKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 181 ~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
+|.+.++.+-.. .+.....||+.||.|+|+.|+-+++.+
T Consensus 605 ~K~~iv~~lq~~--g~~v~mvGDGvND~pAl~~AdVGia~g 643 (884)
T TIGR01522 605 HKMKIVKALQKR--GDVVAMTGDGVNDAPALKLADIGVAMG 643 (884)
T ss_pred HHHHHHHHHHHC--CCEEEEECCCcccHHHHHhCCeeEecC
Confidence 898888876543 344666899999999999999999985
No 147
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.58 E-value=0.0058 Score=70.94 Aligned_cols=112 Identities=18% Similarity=0.151 Sum_probs=73.0
Q ss_pred CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--E-EEeceEEEe-Cceeee-----EEecCCcccccc
Q 042288 115 GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--M-VIGTEICVY-KGRSTG-----FVKSPGVLVGKN 181 (515)
Q Consensus 115 ~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~-vigt~l~~~-~G~~tG-----~i~~~~~~~g~~ 181 (515)
+.+++++. +.++++| +++++||-...-++.+|++ +|++ . +-|.+++.- +..+.. .+-. .+ .-++
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfA-r~-sPe~ 625 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPGEPLLGTEIEAMDDAALAREVEERTVFA-KL-TPLQ 625 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchHhhhhCCHHHHHHHhhhCCEEE-Ee-CHHH
Confidence 34555544 5677899 6677999999999999999 9995 1 223333210 000000 0111 13 5678
Q ss_pred HHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 182 KAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 182 K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
|.+-++.+-.. .+.....||+.||.|.|+.|+-+++++-.....+-|.
T Consensus 626 K~~iV~~Lq~~--G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (903)
T PRK15122 626 KSRVLKALQAN--GHTVGFLGDGINDAPALRDADVGISVDSGADIAKESA 673 (903)
T ss_pred HHHHHHHHHhC--CCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhc
Confidence 99998887654 3445557999999999999999999984444444333
No 148
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.57 E-value=0.025 Score=56.95 Aligned_cols=157 Identities=11% Similarity=0.152 Sum_probs=92.6
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHH-HhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLS-TALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRAT 364 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~-~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~ 364 (515)
-+++++|.|++... .++|+|+++-|...+|..... +....++..+.+. .|.+-.++. ..|.-.+.. +..
T Consensus 98 ~~v~~~g~e~l~~~---~gkgvIl~t~H~GnwE~~~~~l~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~-~~~ 173 (290)
T PRK06628 98 RRIEIIGIENIKKL---EGQPFLLFSGHFANWDISLKILHKFYPKVAVIYRKANNPYVNKLVNESRAGDKLRLIPK-GPE 173 (290)
T ss_pred CeEEEeCHHHHHHh---cCCcEEEEEecchHHHHHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHhcCCceecC-CCc
Confidence 36788998887521 367999999999999987643 3232356666665 566655543 234334431 223
Q ss_pred hHHHHHHHHHcC-CeEEecCCeeeCCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTCREPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
.+..+.+.|++| .+.+.|.=.. .++...+| -+|. ...++||+|+.+.....
T Consensus 174 ~~r~l~k~Lk~g~~v~il~Dq~~-~~gv~v~FFG~~a~t~~~~a~LA~~~~apvv~~~~~r~~~---------------- 236 (290)
T PRK06628 174 GSRALVRAIKESESIVMLVDQKM-NDGIEVPFLGHPAMTASAIAKIALQYKYPIIPCQIIRTKG---------------- 236 (290)
T ss_pred hHHHHHHHHHcCCeEEEEecccC-CCCeeeecCCCccccchHHHHHHHHHCCCEEEEEEEECCC----------------
Confidence 477888999999 7888865442 12223344 2331 45689999998765310
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHH
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATS 476 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~ 476 (515)
+ .+++++.||++.....+..++..+.++.+-+.+++.
T Consensus 237 ------~-~~~i~~~~~~~~~~~~~~~~~~~~~t~~~n~~lE~~ 273 (290)
T PRK06628 237 ------S-YFKVIVHPQLKFEQTGDNKADCYNIMLNINQMLGEW 273 (290)
T ss_pred ------C-eEEEEEcCCCCCCCCCChhhhHHHHHHHHHHHHHHH
Confidence 1 267888888865422111233334444444444443
No 149
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.56 E-value=0.0068 Score=70.33 Aligned_cols=107 Identities=13% Similarity=0.166 Sum_probs=70.8
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc---EEEeceEEEe-Cceeee-----EEecCCccccccHHHHHHHH
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD---MVIGTEICVY-KGRSTG-----FVKSPGVLVGKNKAGALMKM 189 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid---~vigt~l~~~-~G~~tG-----~i~~~~~~~g~~K~~~l~~~ 189 (515)
++++.+++.| +++++||-...-++.+|++ +|++ -+-|.+++.- +..+.. .+-. .+ ..++|.+.++.+
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~-sPe~K~~IV~~L 633 (902)
T PRK10517 557 PALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RL-TPMHKERIVTLL 633 (902)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-Ec-CHHHHHHHHHHH
Confidence 3445677899 6677999999999999999 9995 2223333210 000000 0111 13 567899999987
Q ss_pred hcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcccc
Q 042288 190 LGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 190 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 231 (515)
-.. .+.....||+.||.|.|+.|+-+++++-.....+-|.
T Consensus 634 q~~--G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (902)
T PRK10517 634 KRE--GHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAA 673 (902)
T ss_pred HHC--CCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhC
Confidence 554 3445557999999999999999999984334444333
No 150
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.55 E-value=0.015 Score=59.04 Aligned_cols=160 Identities=9% Similarity=0.080 Sum_probs=94.8
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhc-CCCccEEEec--ccchhhhhhc----CCeeEEecCChh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTAL-GRPIPAVTYS--LSRLSELISP----IKTVRLTRDRAT 364 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~-~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~ 364 (515)
-+++++|.|++...- ..++|+|+++-|.+.+|........ ..++..+.+. .+.+..++.. .|.-.+.. +..
T Consensus 115 ~~~~~~g~e~l~~a~-a~gkgvIllt~H~GnWE~~~~~l~~~~~~~~~vyr~~~n~~~d~~i~~~R~~~g~~~i~~-~~~ 192 (308)
T PRK06553 115 GRVEVRGIEIFERLR-DDGKPALIFTAHLGNWELLAIAAAAFGLDVTVLFRPPNNPYAARKVLEARRTTMGGLVPS-GAG 192 (308)
T ss_pred CeeEecCHHHHHHHH-hcCCCEEEEeeCchHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHHHHcCCCcccC-CCh
Confidence 467788887764110 0367999999999999998654333 3466777775 5666555432 23223321 223
Q ss_pred hHHHHHHHHHcC-CeEEecCCeeeCCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTCREPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
.+..+.+.|++| .+.+.|.-.-+ ++.-.+| -+|. ...++||+|+.+....
T Consensus 193 ~~r~l~r~Lk~g~~v~il~DQ~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apVvp~~~~R~~----------------- 254 (308)
T PRK06553 193 AAFALAGVLERGGHVGMLVDQKFT-RGVEVTFFGRPVKTNPLLAKLARQYDCPVHGARCIRLP----------------- 254 (308)
T ss_pred HHHHHHHHHHcCCeEEEEecccCC-CCceeccCCCcCCCCchHHHHHHHHCCCEEEEEEEEcC-----------------
Confidence 477888999999 88888654432 2333344 2331 4568999999875531
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHc
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSL 477 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l 477 (515)
.+. ++|++.||++.....+...+.++.++++-+.+++..
T Consensus 255 -----~g~-y~i~~~~~~~~~~~~~~~~d~~~~t~~~n~~lE~~I 293 (308)
T PRK06553 255 -----GGR-FRLELTERVELPRDADGQIDVQATMQALTDVVEGWV 293 (308)
T ss_pred -----CCe-EEEEEecCCCCCCCCCccccHHHHHHHHHHHHHHHH
Confidence 122 788888998754211112344455555555555443
No 151
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.54 E-value=0.0017 Score=64.66 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=36.6
Q ss_pred ccccHHHHHHHHhcCCCC-----CceEEEeCCcCcHHHHhccccceeeC
Q 042288 178 VGKNKAGALMKMLGDDEE-----MPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~-----~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
.|..|..+|+.++...+. ..++|+|||.||++||+.|+.+|+++
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 567899988887664333 34799999999999999999999996
No 152
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.52 E-value=0.0078 Score=68.65 Aligned_cols=108 Identities=13% Similarity=0.022 Sum_probs=71.6
Q ss_pred CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-EE-eceEEEeCce----eee----------EEecC
Q 042288 115 GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-VI-GTEICVYKGR----STG----------FVKSP 174 (515)
Q Consensus 115 ~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-vi-gt~l~~~~G~----~tG----------~i~~~ 174 (515)
+..+|++. +.+++.| +++++||-...-++.+|++ +|++. ++ +.++. +|. ++. .+-.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~vfA- 516 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLL--KGDNRDDLPSGELGEMVEDADGFA- 516 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhc--CCcchhhCCHHHHHHHHHhCCEEE-
Confidence 34555544 5677899 6677999999999999999 99963 22 11111 110 000 0111
Q ss_pred CccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCcc
Q 042288 175 GVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPV 229 (515)
Q Consensus 175 ~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~ 229 (515)
.+ ..++|.+.++++-.. .+.....||+.||.|-|+.|+-+++++-.....+-
T Consensus 517 r~-~Pe~K~~iV~~lq~~--G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAke 568 (755)
T TIGR01647 517 EV-FPEHKYEIVEILQKR--GHLVGMTGDGVNDAPALKKADVGIAVAGATDAARS 568 (755)
T ss_pred ec-CHHHHHHHHHHHHhc--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHH
Confidence 13 567899999887543 34455579999999999999999999843334433
No 153
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.47 E-value=0.0087 Score=70.01 Aligned_cols=110 Identities=15% Similarity=0.100 Sum_probs=71.5
Q ss_pred CCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc----EEE-eceEEEe-Cceee-----eEEecCCccccc
Q 042288 116 DLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD----MVI-GTEICVY-KGRST-----GFVKSPGVLVGK 180 (515)
Q Consensus 116 ~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid----~vi-gt~l~~~-~G~~t-----G~i~~~~~~~g~ 180 (515)
.++++ +++.++++| +++++||-...-++.+|++ +|+. .++ |.+++.- +..+. -.+-. .+ ..+
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfa-r~-sPe 655 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLA-RS-SPL 655 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEE-EC-CHH
Confidence 44544 455777899 6677999999999999999 9984 111 2222100 00000 01111 13 678
Q ss_pred cHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC-CCCCCCccc
Q 042288 181 NKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVS 230 (515)
Q Consensus 181 ~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A 230 (515)
+|.+-++.+-.. .+.....||+.||.|+|+.|+-+++++ -.....+-|
T Consensus 656 ~K~~iV~~lq~~--g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~a 704 (941)
T TIGR01517 656 DKQLLVLMLKDM--GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEA 704 (941)
T ss_pred HHHHHHHHHHHC--CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHh
Confidence 899988887554 345666899999999999999999997 333444333
No 154
>PLN02887 hydrolase family protein
Probab=96.46 E-value=0.0015 Score=71.54 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=44.9
Q ss_pred ccccHHHHHHHHhcCCCCC--ceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...|+.++...+.. .++|+|||.||++||+.|+.+|++ |.++++++.|.
T Consensus 504 ~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad 560 (580)
T PLN02887 504 PGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVAD 560 (580)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCC
Confidence 5668999999887764332 479999999999999999999998 56778888776
No 155
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.41 E-value=0.0092 Score=64.68 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=37.7
Q ss_pred hhhcCCeeEEecCChhh----HHHHHHHHHcC-CeEEecCCeeeCCCccccccchhhccCCcEEEEEEEc
Q 042288 349 LISPIKTVRLTRDRATD----ASMIEKLLEKG-DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSN 413 (515)
Q Consensus 349 ~~~~~~~i~idR~~~~~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~ 413 (515)
++...|.+.|+++.-.. ++.+.+.|++| +++| +.|-.....-.+|..-+.+.++|+.=+.+..
T Consensus 389 l~~~~g~~~vn~D~lg~~~~~~~~a~~~L~~G~sVVI--DaTn~~~~~R~~~i~lAk~~gv~v~~i~~~~ 456 (526)
T TIGR01663 389 FFQPAGYKHVNADTLGSTQNCLTACERALDQGKRCAI--DNTNPDAASRAKFLQCARAAGIPCRCFLFNA 456 (526)
T ss_pred HHHHcCCeEECcHHHHHHHHHHHHHHHHHhCCCcEEE--ECCCCCHHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 34445778887765433 45677789999 8877 4444333333444444456778877555544
No 156
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.40 E-value=0.006 Score=71.84 Aligned_cols=103 Identities=15% Similarity=0.036 Sum_probs=69.4
Q ss_pred CCCcHH---HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEE-eCceeeeEEec--------------
Q 042288 115 GDLHPE---TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICV-YKGRSTGFVKS-------------- 173 (515)
Q Consensus 115 ~~~~~~---~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~-~~G~~tG~i~~-------------- 173 (515)
+.++++ +++.++++| +++++||-...-+..+|++ +|+. ..+.+.-+. ++..+||....
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 344554 555777899 6778999999999999999 9983 222111110 01233442110
Q ss_pred ---CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 174 ---PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 174 ---~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
..+ ..++|.+.++.+-.. ...+.+.||+.||.|+|+.|+-+++++
T Consensus 724 ~V~ar~-sP~~K~~iV~~lq~~--g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 724 LVIARC-APQTKVKMIEALHRR--KAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred eEEEec-CHHHHHHHHHHHHhc--CCeeEEeCCCcchHHHHHhCCccEecC
Confidence 123 567898888877544 345667899999999999999999985
No 157
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.39 E-value=0.042 Score=55.45 Aligned_cols=160 Identities=11% Similarity=0.107 Sum_probs=99.7
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHH--hcCCCccEEEec--ccchhhhhhc----CCeeEEecCChh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLST--ALGRPIPAVTYS--LSRLSELISP----IKTVRLTRDRAT 364 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~--~~~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~ 364 (515)
+++++|.+++... .++|+|+++=|.+.+|...... ....++..+.+. .|.+-.++.. .|.-.+.+ ..
T Consensus 94 ~~~~~g~~~~~~~---~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~--~~ 168 (293)
T PRK06946 94 LVQVDSAIDLTDP---DGPPTIFLGLHFVGIEAGSIWLNYSLRRRVGSLYTPMSNPLLDAIAKAARGRFGAEMVSR--AD 168 (293)
T ss_pred eEEEECHHHHHhc---CCCCEEEEecchhHHHHHHHHHHhcccCCceEEeeCCCCHHHHHHHHHHHHhcCCCccCC--Cc
Confidence 6788888776521 4679999999999999987542 223456667775 5666555432 34444522 33
Q ss_pred hHHHHHHHHHcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
.++.+.+.|++| .+.+-|.=..+ .++...+| -+|. ...++||+|+.+.-...
T Consensus 169 ~~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~r~~~--------------- 233 (293)
T PRK06946 169 SARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITEVLPD--------------- 233 (293)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEEEeCC---------------
Confidence 477889999999 77777665433 33344455 2231 45689999997654210
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCC
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTS 483 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~ 483 (515)
+..+++++.||++.. +..+.++.++.+-+.+++.......+
T Consensus 234 -------~~~~~~~~~~~~~~~----~~~~~~~~t~~~n~~lE~~Ir~~PeQ 274 (293)
T PRK06946 234 -------YKGYRLRVFKPWENY----PTGDDDLDARRMNAFLEEQIRLMPEQ 274 (293)
T ss_pred -------CCeEEEEEeCCCcCC----CCCCHHHHHHHHHHHHHHHHHcCcHh
Confidence 112667788888764 24556666666666666655444433
No 158
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.35 E-value=0.018 Score=49.95 Aligned_cols=81 Identities=12% Similarity=0.044 Sum_probs=58.9
Q ss_pred HHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCc--EEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCc
Q 042288 120 ETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGAD--MVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMP 197 (515)
Q Consensus 120 ~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid--~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~ 197 (515)
+.++.+++.=+++|.||--.-.+..+|+. .|++ ++.+ + . ..+.|.+-++++-+. .+.
T Consensus 37 e~iqeL~d~V~i~IASgDr~gsl~~lae~-~gi~~~rv~a---------------~--a-~~e~K~~ii~eLkk~--~~k 95 (152)
T COG4087 37 ETIQELHDMVDIYIASGDRKGSLVQLAEF-VGIPVERVFA---------------G--A-DPEMKAKIIRELKKR--YEK 95 (152)
T ss_pred HHHHHHHHhheEEEecCCcchHHHHHHHH-cCCceeeeec---------------c--c-CHHHHHHHHHHhcCC--CcE
Confidence 34444444436677899888889999997 8875 2222 1 1 456788888876543 456
Q ss_pred eEEEeCCcCcHHHHhccccceeeC
Q 042288 198 DIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 198 ~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
+++.||+.||.++|+.|+.++++=
T Consensus 96 ~vmVGnGaND~laLr~ADlGI~ti 119 (152)
T COG4087 96 VVMVGNGANDILALREADLGICTI 119 (152)
T ss_pred EEEecCCcchHHHhhhcccceEEe
Confidence 899999999999999999999864
No 159
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.32 E-value=0.011 Score=54.51 Aligned_cols=84 Identities=20% Similarity=0.273 Sum_probs=48.0
Q ss_pred HHHHHHHHhCC-CEEEEecCcHH------------HHHHHHHhhcCCcE--EEeceEEEeCceeeeEEecCCccccccHH
Q 042288 119 PETWRVFSSCG-RRCVLTANPRI------------MVEAFLKDFLGADM--VIGTEICVYKGRSTGFVKSPGVLVGKNKA 183 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~------------~v~~ia~~~lGid~--vigt~l~~~~G~~tG~i~~~~~~~g~~K~ 183 (515)
.++++.++++| ..+|+|..+.. .++.+.+. +|++. ++++. ++ .+ ..-+.
T Consensus 48 ~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~~~ii~~~----~~---------~~--~KP~p 111 (166)
T TIGR01664 48 PAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPIQVLAATH----AG---------LY--RKPMT 111 (166)
T ss_pred HHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCEEEEEecC----CC---------CC--CCCcc
Confidence 45677788899 56778887653 46778887 88752 22221 00 01 11112
Q ss_pred HHHHHHhcCCC----CCceEEEeCCc--------CcHHHHhccccce
Q 042288 184 GALMKMLGDDE----EMPDIGLGDRK--------TDSLFLNLCKESY 218 (515)
Q Consensus 184 ~~l~~~~~~~~----~~~~~aygDS~--------~DlpmL~~a~~~~ 218 (515)
+.++..+...+ ...++.+||+. +|+..-+.+|-..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 112 GMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred HHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 23333322211 24478899986 5888877777654
No 160
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.31 E-value=0.003 Score=58.59 Aligned_cols=92 Identities=10% Similarity=0.057 Sum_probs=49.9
Q ss_pred HHHHHHHhCC-CEEEEecC-cHHHHHHHHHhhcCCcEEEeceEEE---eCceeeeEEecCCccccccHHH-HHHHHhcCC
Q 042288 120 ETWRVFSSCG-RRCVLTAN-PRIMVEAFLKDFLGADMVIGTEICV---YKGRSTGFVKSPGVLVGKNKAG-ALMKMLGDD 193 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS-~~~~v~~ia~~~lGid~vigt~l~~---~~G~~tG~i~~~~~~~g~~K~~-~l~~~~~~~ 193 (515)
++++.++++| .+.|+|.+ ...+++.+.+. +|++.. |.+... -+..+++.- .+..|.. .+.+.+++.
T Consensus 52 elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~-~~~~~~~~~Fd~iv~~~~------~~~~kp~~~i~~~~~~~ 123 (174)
T TIGR01685 52 DVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYA-GKTVPMHSLFDDRIEIYK------PNKAKQLEMILQKVNKV 123 (174)
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCC-CCcccHHHhceeeeeccC------CchHHHHHHHHHHhhhc
Confidence 4556777899 56789988 88899999887 886410 100000 011222111 1112222 222222211
Q ss_pred -----CCCceEEEeCCcCcHHHHhcccccee
Q 042288 194 -----EEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 194 -----~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
....++++|||..|+.--..++-.++
T Consensus 124 ~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 124 DPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred ccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 12347889999999877666665543
No 161
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=96.30 E-value=0.0018 Score=62.51 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=42.9
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.++...+. ..++++|||.||++||+.++.++++ |.++++++.|.
T Consensus 154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~ 210 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAAD 210 (230)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcc
Confidence 455788888887665332 2479999999999999999999999 67777887665
No 162
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.16 E-value=0.0023 Score=63.00 Aligned_cols=54 Identities=17% Similarity=0.175 Sum_probs=43.4
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.|..|...++.++...+. ..++++|||.||++||+.++.++++ |+++.+++.|.
T Consensus 185 ~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~ 241 (256)
T TIGR00099 185 KGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALAD 241 (256)
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCC
Confidence 566799999988765432 3479999999999999999999998 66777776665
No 163
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.12 E-value=0.0049 Score=60.79 Aligned_cols=52 Identities=23% Similarity=0.315 Sum_probs=36.9
Q ss_pred ccccHHHHHHHHhcCCC----CCceEEEeCCcCcHHHHhccccceeeCCC----CCCCcc
Q 042288 178 VGKNKAGALMKMLGDDE----EMPDIGLGDRKTDSLFLNLCKESYMVPPN----PKVDPV 229 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~----~~~~~aygDS~~DlpmL~~a~~~~~Vnp~----~~l~~~ 229 (515)
.+..|..+++.++...+ ....+|+|||.||++||+.++.+++++.. ++++..
T Consensus 173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~ 232 (256)
T TIGR01486 173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPG 232 (256)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCcc
Confidence 34456666555543322 23479999999999999999999998543 357665
No 164
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.01 E-value=0.0051 Score=59.06 Aligned_cols=44 Identities=18% Similarity=0.287 Sum_probs=33.8
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceeeC
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
.|..|...++..+...+ ...++++|||.||++||+.|+.+++|.
T Consensus 176 ~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~~ 221 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVIK 221 (221)
T ss_pred CCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEeC
Confidence 45567777777655432 234799999999999999999999973
No 165
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=95.88 E-value=0.0062 Score=58.97 Aligned_cols=43 Identities=23% Similarity=0.487 Sum_probs=33.8
Q ss_pred cccHHHHHHHHhcCCC----CCceEEEeCCcCcHHHHhccccceeeC
Q 042288 179 GKNKAGALMKMLGDDE----EMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~----~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
+..|..+++.++...+ ...++|+|||.||++||+.|+.+|+|.
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG 225 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence 5578888877754432 124799999999999999999999984
No 166
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.85 E-value=0.078 Score=53.89 Aligned_cols=162 Identities=15% Similarity=0.149 Sum_probs=100.8
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
-+++++|.|.+...- ..++|+|+++=|...+|..........++..+.+. .+.+-.++. ..|...+.++ .
T Consensus 108 ~~v~i~g~e~l~~a~-~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~ 183 (309)
T PRK06860 108 RWTEVEGLEHIREVQ-AQGRGVLLVGVHFLTLELGARIFGMHNPGIGVYRPNDNPLYDWLQTWGRLRSNKSMLDRK---D 183 (309)
T ss_pred CeEEEeCHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCCHHHHHHHHHHHhhcCCcCcCcc---c
Confidence 367888988764110 14679999999999999976543333356666665 555554443 2343444332 3
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCccccc--------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLLRF--------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F--------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
+..+.+.|++| .+++-|.-.-. .++...+| -+|. ...++||+|+.+.-...
T Consensus 184 ~r~~~k~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~R~~~--------------- 248 (309)
T PRK06860 184 LKGMIKALKKGERIWYAPDHDYGPRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPRRKPD--------------- 248 (309)
T ss_pred HHHHHHHHhcCCeEEEeCCCCCCCCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEEEeCC---------------
Confidence 67788899999 77777554432 22233333 3331 45689999999865321
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCC
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTS 483 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~ 483 (515)
+..++|++.||++.. ...+..+.++.+.+.+++.......+
T Consensus 249 -------~~~~~i~~~~~~~~~----~~~d~~~~t~~~n~~lE~~Ir~~PeQ 289 (309)
T PRK06860 249 -------GKGYELIILPPEDSP----PLDDAEATAAWMNKVVEKCILMAPEQ 289 (309)
T ss_pred -------CCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCchH
Confidence 113778888888754 24666777777777777765544444
No 167
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=95.83 E-value=0.011 Score=62.12 Aligned_cols=117 Identities=12% Similarity=0.144 Sum_probs=89.3
Q ss_pred HcCCCHHHHHHHHHHHhch-----------------hhcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcC
Q 042288 93 FAGMKVPSIESVARAVLPK-----------------FYSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLG 151 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~-----------------~~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lG 151 (515)
-.|.-.+++++.+++.... ++++.+.|...| ++|+-| +++.+||-...-+..++.+ -|
T Consensus 407 ~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AG 485 (681)
T COG2216 407 RGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AG 485 (681)
T ss_pred cCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hC
Confidence 3477888999988877531 133445555555 577899 7788999999999999999 99
Q ss_pred CcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCccc
Q 042288 152 ADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVS 230 (515)
Q Consensus 152 id~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A 230 (515)
+|+.++ .| ..|.|.+.+++...+ .....-.||+.||-|-|..|+..++.|-..+-++-|
T Consensus 486 VDdfiA-----------------ea-tPEdK~~~I~~eQ~~--grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEA 544 (681)
T COG2216 486 VDDFIA-----------------EA-TPEDKLALIRQEQAE--GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEA 544 (681)
T ss_pred chhhhh-----------------cC-ChHHHHHHHHHHHhc--CcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHh
Confidence 997666 26 788999999987665 233444699999999999999999999766544433
No 168
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=95.82 E-value=0.0045 Score=60.18 Aligned_cols=54 Identities=17% Similarity=0.076 Sum_probs=43.1
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee-CCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 231 (515)
.+..|...++.++...+. ..++++|||.||++||+.++.++++ |.+++++++|.
T Consensus 156 ~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 156 LRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRH 212 (236)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhc
Confidence 466788888877654322 2478999999999999999999999 56778888776
No 169
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.73 E-value=0.077 Score=52.61 Aligned_cols=74 Identities=16% Similarity=0.039 Sum_probs=42.7
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHH---HHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVE---AFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~---~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~ 195 (515)
++++.++++| .+++||+......+ ...+. +|++.+.-..+..++ .+..|..+.+..... .
T Consensus 125 e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~-------------~~~~K~~rr~~I~~~--y 188 (266)
T TIGR01533 125 DFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKK-------------DKSSKESRRQKVQKD--Y 188 (266)
T ss_pred HHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCC-------------CCCCcHHHHHHHHhc--C
Confidence 4445566889 66779997644433 55566 787532111121111 122466666655443 4
Q ss_pred CceEEEeCCcCcHH
Q 042288 196 MPDIGLGDRKTDSL 209 (515)
Q Consensus 196 ~~~~aygDS~~Dlp 209 (515)
.....+||..+|+.
T Consensus 189 ~Ivl~vGD~~~Df~ 202 (266)
T TIGR01533 189 EIVLLFGDNLLDFD 202 (266)
T ss_pred CEEEEECCCHHHhh
Confidence 45677899999985
No 170
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase. This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis.
Probab=95.71 E-value=0.1 Score=52.90 Aligned_cols=163 Identities=13% Similarity=0.111 Sum_probs=98.3
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
-+++++|.|++...- ..++|+|+++=|...++..........+...+.+. .+.+-.++. ..|.-.+.++ .
T Consensus 102 ~~v~i~g~e~l~~a~-~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~l~~~~R~~~g~~~i~~~---~ 177 (303)
T TIGR02207 102 KWMQIEGLEHLQRAQ-KQGRGVLLVGVHFLTLELGARIFGQQQPGIGVYRPHNNPLFDWIQTRGRLRSNKAMIDRK---D 177 (303)
T ss_pred CcEEEECHHHHHHHH-hcCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCCHHHHHHHHHHHHhcCCcccCcc---c
Confidence 467888988764110 14679999999999999986443332355556554 455544432 2232334332 2
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCcccc--------ccchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLLR--------FSALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~--------Fk~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
...+.+.|++| .+.|-+.-.-+ .++...+ +-.|. ...++||+|+.+.-...
T Consensus 178 ~r~i~~~Lk~g~~v~il~Dq~~~~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~r~~~--------------- 242 (303)
T TIGR02207 178 LRGMIKALKNGERIWYAPDHDYGRKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPRRNED--------------- 242 (303)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEEEeCC---------------
Confidence 67788999999 77777653322 1222333 33452 45689999999865311
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCC
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTSF 484 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~ 484 (515)
+..++|++.||++.. .+.+..+.++.+-+.+++.......++
T Consensus 243 -------~~~~~i~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~P~QW 284 (303)
T TIGR02207 243 -------GSGYRLKIDPPLDDF----PGDDEIAAAARMNKIVEKMIMRAPEQY 284 (303)
T ss_pred -------CCeEEEEEeCCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHHH
Confidence 113778888888653 245666777777677776655444443
No 171
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.65 E-value=0.034 Score=65.44 Aligned_cols=112 Identities=14% Similarity=0.035 Sum_probs=69.0
Q ss_pred CCCcHHH---HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-E-E-----EeceEEE-------eC---ceeeeEEec
Q 042288 115 GDLHPET---WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-M-V-----IGTEICV-------YK---GRSTGFVKS 173 (515)
Q Consensus 115 ~~~~~~~---~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~-v-----igt~l~~-------~~---G~~tG~i~~ 173 (515)
+..++++ ++.++++| +++++||=...-+..++++ +|+- . - +..++.. .+ -.+||.-..
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh
Confidence 3455554 55677899 6677999999999999999 9971 0 0 0000000 00 122322110
Q ss_pred -------------------CCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCC-CCCCCccc
Q 042288 174 -------------------PGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVS 230 (515)
Q Consensus 174 -------------------~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A 230 (515)
..+ .-++|.+-++.+-.. .+.+.+.||+.||.|||+.|+.+++++- .....+-|
T Consensus 646 ~l~~~el~~~~~~~~~~VfaR~-sPeqK~~IV~~lq~~--g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~a 719 (997)
T TIGR01106 646 DMTSEQLDEILKYHTEIVFART-SPQQKLIIVEGCQRQ--GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA 719 (997)
T ss_pred hCCHHHHHHHHHhcCCEEEEEC-CHHHHHHHHHHHHHC--CCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHh
Confidence 011 456788877776443 3456678999999999999999999863 33333433
No 172
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.63 E-value=0.032 Score=60.66 Aligned_cols=83 Identities=19% Similarity=0.174 Sum_probs=65.7
Q ss_pred CCCcHHHH---HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHh
Q 042288 115 GDLHPETW---RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKML 190 (515)
Q Consensus 115 ~~~~~~~~---~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~ 190 (515)
+.+++++. +.++++| .++++||-...-+..++++ +|+. ..+ ..++|.+.++++.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi~--------------------~~~-~p~~K~~~v~~l~ 403 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGIF--------------------ARV-TPEEKAALVEALQ 403 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCce--------------------ecc-CHHHHHHHHHHHH
Confidence 45666554 4677889 6677999999999999998 8860 123 6788999998875
Q ss_pred cCCCCCceEEEeCCcCcHHHHhccccceeeC
Q 042288 191 GDDEEMPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 191 ~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
.. .......||+.||.|+|+.|+-.++++
T Consensus 404 ~~--g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 404 KK--GRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HC--CCEEEEECCChhhHHHHHhCCCccccc
Confidence 44 345677899999999999999999887
No 173
>PLN02382 probable sucrose-phosphatase
Probab=95.59 E-value=0.0057 Score=64.69 Aligned_cols=53 Identities=19% Similarity=0.171 Sum_probs=41.5
Q ss_pred ccccHHHHHHHHhcCC---C--CCceEEEeCCcCcHHHHhccc-cceee-CCCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDD---E--EMPDIGLGDRKTDSLFLNLCK-ESYMV-PPNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~---~--~~~~~aygDS~~DlpmL~~a~-~~~~V-np~~~l~~~A 230 (515)
.|..|..+|+.++... + ...++|+|||.||++||+.++ .+|++ |.++++++.|
T Consensus 172 ~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a 231 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWY 231 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHH
Confidence 5667888888776543 2 234799999999999999999 79998 5777788654
No 174
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated
Probab=95.57 E-value=0.13 Score=52.33 Aligned_cols=161 Identities=12% Similarity=0.089 Sum_probs=98.3
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh-cCCCccEEEec--ccchhhhhh----cCCeeEEecCChh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA-LGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRAT 364 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~ 364 (515)
-+++++|.|.+...- ..++|+|+++=|...++....... .+.++..+.+. .+.+-.++. ..|.-.+. ...
T Consensus 113 ~~~~~~g~e~l~~a~-~~gkgvI~~t~H~gnwE~~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~--~~~ 189 (314)
T PRK08943 113 RRVEWHGLEILEEAR-ANGENVIFLVPHGWAIDIPAMLLASQGQPMAAMFHNQRNPLFDWLWNRVRRRFGGRLHA--RED 189 (314)
T ss_pred CeEEEECHHHHHHHH-hCCCCEEEEEechhHHHHHHHHHHhcCCCccEEEeCCCCHHHHHHHHHHHhhcCCeeec--Cch
Confidence 367888988764110 146799999999999997654433 23566777775 455555443 23333343 234
Q ss_pred hHHHHHHHHHcC-CeEEecCCeee-CCCcccccc-------chh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTC-REPFLLRFS-------ALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
.+..+.+.|++| .+++-|.-..+ +++...+|- +|. ...++||+|+.+.-.. .
T Consensus 190 ~~r~i~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~R~~---~------------ 254 (314)
T PRK08943 190 GIKPFISSVRQGYWGYYLPDEDHGPEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPVYNG---K------------ 254 (314)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEEEeC---C------------
Confidence 477889999999 78888665543 333344542 231 4568999999874321 0
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
+..++|++.||++.. ...+..+.++++-+.+++......
T Consensus 255 -------~~~~~i~~~~~~~~~----~~~d~~~~t~~~~~~lE~~Ir~~P 293 (314)
T PRK08943 255 -------THRLDIEIRPPMDDL----LSADDETIARRMNEEVEQFVGPHP 293 (314)
T ss_pred -------CCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCc
Confidence 112778888888653 135566666666666666544333
No 175
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.49 E-value=0.084 Score=51.37 Aligned_cols=144 Identities=17% Similarity=0.129 Sum_probs=83.7
Q ss_pred HcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEe-Cce
Q 042288 93 FAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVY-KGR 166 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~-~G~ 166 (515)
=.|++.+++++.+++.-- ....-..++++.+++++ -+.|.||+...+++.+.++ .|. -+|+++.+.++ +|.
T Consensus 72 ~~~l~k~~i~~~V~~s~i--~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~~g~ 148 (246)
T PF05822_consen 72 EQGLTKSEIEEAVKESDI--MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDEDGV 148 (246)
T ss_dssp HHT-BGGGHHHHHHCS-----B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-TTSB
T ss_pred hcCcCHHHHHHHHHhcch--hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECCcce
Confidence 457889999988886522 12234467888899999 5677899999999999998 674 37999999995 788
Q ss_pred eeeEEecCCccccccHHH-HH--HHHhcCCC-CCceEEEeCCcCcHHHHhcc---ccceeeCC-----CCCCCcccccCC
Q 042288 167 STGFVKSPGVLVGKNKAG-AL--MKMLGDDE-EMPDIGLGDRKTDSLFLNLC---KESYMVPP-----NPKVDPVSQDKL 234 (515)
Q Consensus 167 ~tG~i~~~~~~~g~~K~~-~l--~~~~~~~~-~~~~~aygDS~~DlpmL~~a---~~~~~Vnp-----~~~l~~~A~~~~ 234 (515)
++|.-. +-. +--.|-+ .+ ..+..... .....-.|||.+|+-|-.-+ ++.+-|.. +..|.++ ..
T Consensus 149 l~gF~~-~lI-H~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y---~~ 223 (246)
T PF05822_consen 149 LVGFKG-PLI-HTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKY---LE 223 (246)
T ss_dssp EEEE-S-S----TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHH---HC
T ss_pred EeecCC-Cce-EEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHH---Hh
Confidence 887432 211 2222333 22 12222211 23467789999999998766 33333322 2224433 44
Q ss_pred CCceE-EccCc
Q 042288 235 PKPIV-FHDGR 244 (515)
Q Consensus 235 ~W~i~-f~~~r 244 (515)
.|-|| -+|+-
T Consensus 224 ~yDIVlv~D~t 234 (246)
T PF05822_consen 224 AYDIVLVDDQT 234 (246)
T ss_dssp CSSEEEET--B
T ss_pred cCCEEEECCCC
Confidence 78887 56553
No 176
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase. This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars.
Probab=95.48 E-value=0.18 Score=51.05 Aligned_cols=159 Identities=16% Similarity=0.165 Sum_probs=97.6
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHh-cCCCccEEEec--ccchhhhhhc----CCeeEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTA-LGRPIPAVTYS--LSRLSELISP----IKTVRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~~ 365 (515)
+++++|.|++...- ..++|+|+++=|...+|....... ...++..+.+. .+.+-.++.. .|.-.+. ....
T Consensus 105 ~~~i~g~e~l~~~~-~~gkgvi~~t~H~gnwE~~~~~~~~~~~~~~~v~r~~~n~~~d~~~~~~R~~~g~~~i~--~~~~ 181 (305)
T TIGR02208 105 RVNLMGLEHIEAAQ-AAGKPVIFLVPHGWAIDYAGLRLASQGLPMVTMFNNHKNPLFDWLWNRVRSRFGGHVYA--REAG 181 (305)
T ss_pred ceEEeCHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHhcCCCceEEeeCCCCHHHHHHHHHHHhcCCCceec--Chhh
Confidence 67888988764110 146799999999999997754433 33566777775 5555554432 3333343 2345
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCcccccc-------chh----hccCCcEEEEEEEcCccCccCcccCCCccCCcc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLLRFS-------ALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPF 432 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~ 432 (515)
+..+.+.|++| .+.+-+.=..+ +++-..+|- +|. ...++||+|+...-.. .
T Consensus 182 ~r~i~~aLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~r~~---~------------- 245 (305)
T TIGR02208 182 IKALLASLKRGESGYYLPDEDHGPEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPGYNQ---V------------- 245 (305)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEEEEC---C-------------
Confidence 77889999999 77777655433 334444552 221 4568999999875421 0
Q ss_pred ccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCC
Q 042288 433 YFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYE 480 (515)
Q Consensus 433 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~ 480 (515)
+..++|++.||++.. ...+..+.++.+-+.+++.....
T Consensus 246 ------~~~~~i~~~~~~~~~----~~~~~~~~t~~~n~~lE~~Ir~~ 283 (305)
T TIGR02208 246 ------TGKFELTVRPAMATE----LSVDPEQEARAMNKEVEQFILPY 283 (305)
T ss_pred ------CCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcC
Confidence 112677888887653 24566677777666666654433
No 177
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=95.45 E-value=0.018 Score=52.48 Aligned_cols=87 Identities=11% Similarity=0.033 Sum_probs=50.5
Q ss_pred hcCCCcHHHHHHHHhCC-CEEEEecCcH----HHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHH
Q 042288 113 YSGDLHPETWRVFSSCG-RRCVLTANPR----IMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALM 187 (515)
Q Consensus 113 ~~~~~~~~~~~~l~~~G-~~vivSaS~~----~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~ 187 (515)
|.+.+..+.++.|+++| .++.+||-.. -..+-+++- +.++.... + .|+|--.. . ..-.|..+|+
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~-F~i~~m~p----v---~f~Gdk~k--~-~qy~Kt~~i~ 182 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKN-FHITNMNP----V---IFAGDKPK--P-GQYTKTQWIQ 182 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhh-cccCCCcc----e---eeccCCCC--c-ccccccHHHH
Confidence 44446667888999999 5556877533 333445554 44432221 1 23332221 1 3345766665
Q ss_pred HHhcCCCCCceEEEeCCcCcHHHHhcccc
Q 042288 188 KMLGDDEEMPDIGLGDRKTDSLFLNLCKE 216 (515)
Q Consensus 188 ~~~~~~~~~~~~aygDS~~DlpmL~~a~~ 216 (515)
+ +...+.||||.+|+---+.||-
T Consensus 183 ~------~~~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 183 D------KNIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred h------cCceEEecCCchhhhHHHhcCc
Confidence 4 3456789999999987776653
No 178
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated
Probab=95.37 E-value=0.24 Score=49.82 Aligned_cols=161 Identities=17% Similarity=0.091 Sum_probs=95.1
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhhc----CCeeEEecCChhhH
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELISP----IKTVRLTRDRATDA 366 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~~~ 366 (515)
.++++|.|.+...- ..++|+|+++=|...+|..........++..+.+. .+.+..++.. .|.-.+. .....+
T Consensus 84 ~~~~~g~e~l~~a~-~~gkgvIllt~H~GnwE~~~~~~~~~~~~~~v~r~~~n~~~~~~~~~~R~~~g~~~i~-~~~~~~ 161 (289)
T PRK08905 84 VKDDHGWEHVEAAL-AEGRGILFLTPHLGCFEVTARYIAQRFPLTAMFRPPRKAALRPLMEAGRARGNMRTAP-ATPQGV 161 (289)
T ss_pred eeeecCHHHHHHHH-hcCCCEEEEecccchHHHHHHHHHhcCCceEEEECCCCHHHHHHHHHHhcccCCceec-cCCccH
Confidence 35778877653110 14679999999999999975433222566777775 4566554432 2322232 122347
Q ss_pred HHHHHHHHcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccc
Q 042288 367 SMIEKLLEKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433 (515)
Q Consensus 367 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~ 433 (515)
..+.+.|++| .+.+-+--..+ .++...+| -.|. ...++||+|+.+.-...
T Consensus 162 ~~i~~aLk~g~~v~il~Dq~~~~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~R~~~----------------- 224 (289)
T PRK08905 162 RMLVKALRRGEAVGILPDQVPSGGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGERLPR----------------- 224 (289)
T ss_pred HHHHHHHhcCCeEEEcCCCCCCCCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEEEcCC-----------------
Confidence 7889999999 77776543322 22233344 3341 45689999999854311
Q ss_pred cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 042288 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECT 482 (515)
Q Consensus 434 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t 482 (515)
+..+++++.||+.+. .++.++.++.+-+.+++.......
T Consensus 225 -----~~~y~~~~~~~~~~~-----~~~~~~~t~~~~~~lE~~Ir~~Pe 263 (289)
T PRK08905 225 -----GRGYRLHLRPVQEPL-----PGDKAADAAVINAEIERLIRRFPT 263 (289)
T ss_pred -----CCcEEEEEecCCCCC-----CCCHHHHHHHHHHHHHHHHHcCcH
Confidence 112677888887653 345666666666666665444443
No 179
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.30 E-value=0.017 Score=57.50 Aligned_cols=49 Identities=22% Similarity=0.246 Sum_probs=37.7
Q ss_pred ccccHHHHHHHHhcCCC--C-CceEEEeCCcCcHHHHhccccceee-CCCCCCC
Q 042288 178 VGKNKAGALMKMLGDDE--E-MPDIGLGDRKTDSLFLNLCKESYMV-PPNPKVD 227 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~-~~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~ 227 (515)
.+ .|...++.+....+ . ..++++|||.||++||+.++.++++ |..+.++
T Consensus 188 ~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 45 67777777654322 3 5578999999999999999999998 5566665
No 180
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.16 E-value=0.017 Score=67.16 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=68.0
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc--E---EE--eceEEEe-CceeeeEEecC----CccccccHHHH
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD--M---VI--GTEICVY-KGRSTGFVKSP----GVLVGKNKAGA 185 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid--~---vi--gt~l~~~-~G~~tG~i~~~----~~~~g~~K~~~ 185 (515)
+++++.++++| +++++||=...-+..+|++ +|+. . ++ |.++..- |..+.-.+... -+ ..++|.+-
T Consensus 553 ~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARv-sP~qK~~I 630 (917)
T COG0474 553 KEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARV-SPEQKARI 630 (917)
T ss_pred HHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEc-CHHHHHHH
Confidence 45666788999 6778999999999999999 9962 1 12 4443321 11111011100 12 56789998
Q ss_pred HHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCC
Q 042288 186 LMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 186 l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
++.+-+. .+....-||+.||.|+|+.|+-+++..-
T Consensus 631 V~~lq~~--g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 631 VEALQKS--GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHhC--CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 8887665 3445667999999999999999996553
No 181
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.14 E-value=0.045 Score=51.70 Aligned_cols=79 Identities=18% Similarity=0.296 Sum_probs=51.0
Q ss_pred EEEEecCcHH----HHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHH-HHHHHhcCCC-CCceEEEeCC
Q 042288 131 RCVLTANPRI----MVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAG-ALMKMLGDDE-EMPDIGLGDR 204 (515)
Q Consensus 131 ~vivSaS~~~----~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~-~l~~~~~~~~-~~~~~aygDS 204 (515)
..|++=|-+. +...+ .+ .|+..+.|++.... .+ +| .|.+|+. .+-+.+...+ ...+++.|||
T Consensus 151 eti~~rs~d~~~~~~~~~L-~e-~glt~v~garf~~v--------~~-as-~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg 218 (274)
T COG3769 151 ETIIWRSSDERMAQFTARL-NE-RGLTFVHGARFWHV--------LD-AS-AGKGQAANWLLETYRRLGGARTTLGLGDG 218 (274)
T ss_pred hheeecccchHHHHHHHHH-Hh-cCceEEeccceEEE--------ec-cc-cCccHHHHHHHHHHHhcCceeEEEecCCC
Confidence 3455555555 44444 43 78998888887542 12 45 5666655 2223333222 2347999999
Q ss_pred cCcHHHHhccccceeeC
Q 042288 205 KTDSLFLNLCKESYMVP 221 (515)
Q Consensus 205 ~~DlpmL~~a~~~~~Vn 221 (515)
.||.|||+..+.++.|.
T Consensus 219 ~nD~Pl~ev~d~AfiV~ 235 (274)
T COG3769 219 PNDAPLLEVMDYAFIVK 235 (274)
T ss_pred CCcccHHHhhhhheeec
Confidence 99999999999999997
No 182
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.09 E-value=0.57 Score=45.18 Aligned_cols=113 Identities=12% Similarity=0.017 Sum_probs=61.2
Q ss_pred HHcCCCHHHHHHHHHHHhchh-----hcCCCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhc---CCcEEEece
Q 042288 92 TFAGMKVPSIESVARAVLPKF-----YSGDLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFL---GADMVIGTE 159 (515)
Q Consensus 92 ~~~G~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~l---Gid~vigt~ 159 (515)
+=.+.....++++--..+.+. ....++|++.+ .++++| ..+|+|.+.....+.+.+. + ++...+.
T Consensus 66 ~~~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~-- 142 (220)
T TIGR01691 66 MDKDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFS-- 142 (220)
T ss_pred HHcCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcc--
Confidence 344555555555444433222 23346776666 455789 5678888887777777664 4 2221111
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHH---HHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALM---KMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~---~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+.+... .+ ..-+.+.+. +.++.. ...++.+||+..|+..-+.+|-..+
T Consensus 143 -----~~fd~~-~g-----~KP~p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 143 -----GYFDTT-VG-----LKTEAQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred -----eEEEeC-cc-----cCCCHHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 111100 01 111222333 333321 2447889999999999999988764
No 183
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=95.08 E-value=0.13 Score=51.96 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=48.9
Q ss_pred ccchhhhhhcCCeeEEecCChhhHHHHHHHHHc---C-CeEEecCCeee-----CCCc--cccccchh----hccCCcEE
Q 042288 343 LSRLSELISPIKTVRLTRDRATDASMIEKLLEK---G-DLVICPEGTTC-----REPF--LLRFSALF----AELTDEVV 407 (515)
Q Consensus 343 ~~~~g~~~~~~~~i~idR~~~~~~~~~~~~l~~---G-~l~IFPEGTrs-----~~~~--l~~Fk~Gf----~~~~~pVv 407 (515)
+|+++.++.++|.+.++|++- ...|++ | +++|.|-|..- .+.. .++=++|| .+.|+|||
T Consensus 110 ~P~~R~~~~~~G~~~~sr~s~------~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LV 183 (297)
T PF03982_consen 110 IPFFRDFLLWLGAVSASRESI------RYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLV 183 (297)
T ss_pred ccccchhhhhccccccccccc------ceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEE
Confidence 688888888999998887753 334444 5 69999999653 2222 34556787 56799999
Q ss_pred EEEEEcCcc
Q 042288 408 PVAMSNRMS 416 (515)
Q Consensus 408 PV~i~~~~~ 416 (515)
||.--|...
T Consensus 184 Pv~~FGE~d 192 (297)
T PF03982_consen 184 PVYSFGEND 192 (297)
T ss_pred eEEEeCChh
Confidence 999999533
No 184
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=95.03 E-value=0.39 Score=46.22 Aligned_cols=121 Identities=13% Similarity=0.095 Sum_probs=68.3
Q ss_pred cCCCHHHHHHHHHHHhchhhcC-CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcC-----CcE-EEeceEEE
Q 042288 94 AGMKVPSIESVARAVLPKFYSG-DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLG-----ADM-VIGTEICV 162 (515)
Q Consensus 94 ~G~~~~~l~~~~~~~~~~~~~~-~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lG-----id~-vigt~l~~ 162 (515)
--++.+++...-++-..+.+.. ...|.+.+ .++.+| -..++|.|....++--.++ ++ +++ |+|+.-++
T Consensus 69 dp~s~ee~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v 147 (222)
T KOG2914|consen 69 DPVSREEFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEV 147 (222)
T ss_pred CCCCHHHHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccc
Confidence 4567777766555554443222 23344444 556788 6778887765555544443 33 332 33455555
Q ss_pred eCceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCC
Q 042288 163 YKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKV 226 (515)
Q Consensus 163 ~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 226 (515)
.+|+ + .-+.=..+. +.++......++.+.||.+=+..-..|+..++..|+..+
T Consensus 148 ~~gK---------P-~Pdi~l~A~-~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~ 200 (222)
T KOG2914|consen 148 KNGK---------P-DPDIYLKAA-KRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDL 200 (222)
T ss_pred cCCC---------C-CchHHHHHH-HhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCc
Confidence 4441 1 111111122 234442114578899999999999999999998888543
No 185
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=95.03 E-value=0.41 Score=48.63 Aligned_cols=158 Identities=13% Similarity=0.122 Sum_probs=93.5
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhhc----CC--eeEEecCChh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELISP----IK--TVRLTRDRAT 364 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~~----~~--~i~idR~~~~ 364 (515)
+++++|.|++...- ..++|+|+++=|...+|..........++..+.+. .+.+-.++.. .| .+.+. ..
T Consensus 106 ~~~~~g~e~l~~a~-~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~~ 181 (310)
T PRK05646 106 LAHIEGLEHLQQAQ-QEGQGVILMALHFTTLEIGAALLGQQHTIDGMYREHKNPVFDFIQRRGRERHNLDSTAIE---RE 181 (310)
T ss_pred eEEEeCHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCCHHHHHHHHHHhhccCCCccccc---Hh
Confidence 67788888764110 14679999999999999976443332345556655 4655555432 23 23232 23
Q ss_pred hHHHHHHHHHcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
.+..+.+.|++| .+.+-+.=..+ .++...+| -+|. ...++||+|+.+.-...
T Consensus 182 ~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~~~--------------- 246 (310)
T PRK05646 182 DVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQKRLAD--------------- 246 (310)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEEEeCC---------------
Confidence 467788889999 77777654332 22333454 2331 45689999999865311
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCC
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYE 480 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~ 480 (515)
+..++|++.||++.. ...+.++.++++-+.+++.....
T Consensus 247 -------g~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~lE~~Ir~~ 284 (310)
T PRK05646 247 -------GSGYRLVIHPPLEDF----PGESEEADCLRINQWVERVVREC 284 (310)
T ss_pred -------CCeEEEEEeCCCcCC----CCCCHHHHHHHHHHHHHHHHHcC
Confidence 113778888888653 24555555555555555544333
No 186
>PTZ00174 phosphomannomutase; Provisional
Probab=95.00 E-value=0.0068 Score=59.52 Aligned_cols=51 Identities=20% Similarity=0.113 Sum_probs=39.7
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeC----CcCcHHHHhc---cccceeeCCCCCCCcccc
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGD----RKTDSLFLNL---CKESYMVPPNPKVDPVSQ 231 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygD----S~~DlpmL~~---a~~~~~Vnp~~~l~~~A~ 231 (515)
.|..|..+|+.++.. ....+|+|| +.||++||+. +|++|+ |+.+.+..+|+
T Consensus 185 ~gvsKg~al~~L~~~--~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~ 242 (247)
T PTZ00174 185 KGWDKTYCLRHLEND--FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKE 242 (247)
T ss_pred CCCcHHHHHHHHHhh--hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHH
Confidence 677899999999876 567899999 8999999994 556655 77666655543
No 187
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=94.92 E-value=0.54 Score=47.71 Aligned_cols=161 Identities=12% Similarity=0.052 Sum_probs=96.7
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhhH
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATDA 366 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~~ 366 (515)
.++++|.|++...- ..++|+|+++=|...+|..........++..+.+. .+.+-.++. ..|.-.|. +....+
T Consensus 96 ~~~~~g~e~l~~~~-~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~-~~~~~~ 173 (305)
T PRK08734 96 LRQRHGQELYDAAL-ASGRGVIVAAPHFGNWELLNQWLSERGPIAIVYRPPESEAVDGFLQLVRGGDNVRQVR-AEGPAV 173 (305)
T ss_pred eEEecCHHHHHHHH-HcCCCEEEEccccchHHHHHHHHHccCCceEEEeCCCCHHHHHHHHHHhccCCCeeec-CCchhH
Confidence 45788888864110 13679999999999999986544333466667665 566655543 23444452 223457
Q ss_pred HHHHHHHHcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCccc
Q 042288 367 SMIEKLLEKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433 (515)
Q Consensus 367 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~ 433 (515)
..+.+.|++| .+.+-|.=.-. .++...+| -+|. ...++||+|+.+.-.. .
T Consensus 174 r~li~~Lk~g~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~R~~---~-------------- 236 (305)
T PRK08734 174 RQLFKVLKDGGAVGILPDQQPKMGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCERIG---P-------------- 236 (305)
T ss_pred HHHHHHHhcCCeEEEeCCCCCCCCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEEEcC---C--------------
Confidence 8899999999 77777654432 22333344 3341 4568999998875431 0
Q ss_pred cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 434 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
+..+++.+.||++.. ..++..+.++.+-+.+++...-..
T Consensus 237 -----~~~y~~~~~~~~~~~----~~~~~~~~~~~~n~~lE~~Ir~~P 275 (305)
T PRK08734 237 -----DLEFALHVQPADPAV----ADPDPLRAATALNAGIERIARRDP 275 (305)
T ss_pred -----CCcEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCc
Confidence 112677887776543 245555666665555555444333
No 188
>PLN02811 hydrolase
Probab=94.85 E-value=0.45 Score=45.56 Aligned_cols=25 Identities=8% Similarity=-0.117 Sum_probs=20.8
Q ss_pred CceEEEeCCcCcHHHHhccccceee
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
..++.+|||..|+..-+.+|-+.+.
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCeEEE
Confidence 4578899999999999988887653
No 189
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=94.62 E-value=0.3 Score=49.55 Aligned_cols=159 Identities=14% Similarity=0.088 Sum_probs=95.7
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhhc----CCeeEEecCChhhH
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELISP----IKTVRLTRDRATDA 366 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~~----~~~i~idR~~~~~~ 366 (515)
+++++|.|++...- ..++|+|+++-|...+|..........++..+.+. .+.+-.++.. .|.-.+.+ ..+
T Consensus 109 ~v~v~g~e~l~~a~-~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n~~~d~~i~~~R~~~g~~~i~~---~~~ 184 (306)
T PRK08733 109 GVQIEGLEHLQQLQ-QQGRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRRHRNPVFEWAVKRGRLRYATHMFAN---EDL 184 (306)
T ss_pred cEEEeCHHHHHHHH-hCCCCEEEEecCchHHHHHHHHHHccCCceEEEeCCCCHHHHHHHHHHHhhcCCcCcCc---ccH
Confidence 67888987764110 14679999999999999876443333455666665 4555444332 23333432 236
Q ss_pred HHHHHHHHcC-CeEEecCCeee-CCCcccccc-------chh----hccCCcEEEEEEEcCccCccCcccCCCccCCccc
Q 042288 367 SMIEKLLEKG-DLVICPEGTTC-REPFLLRFS-------ALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433 (515)
Q Consensus 367 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~ 433 (515)
+.+.+.|++| .+.+-|.=... +++...+|- +|. ...++||+|+...-.
T Consensus 185 r~~~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~------------------- 245 (306)
T PRK08733 185 RATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHRRE------------------- 245 (306)
T ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEEEe-------------------
Confidence 7788999999 77777654432 333444552 231 456899999987432
Q ss_pred cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcCC
Q 042288 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECTS 483 (515)
Q Consensus 434 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~ 483 (515)
++ .+++++.||++.. ...+..+.++++-+.+++.......+
T Consensus 246 ----~~-~y~i~i~~~~~~~----~~~~i~~~t~~~~~~lE~~Ir~~P~Q 286 (306)
T PRK08733 246 ----GG-RYVLKIAPPLADF----PSDDVIADTTRVNAAIEDMVREAPDQ 286 (306)
T ss_pred ----CC-eEEEEEECCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHh
Confidence 11 2677788888643 24566666666666666654444433
No 190
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=94.44 E-value=0.019 Score=56.28 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=39.9
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhc-cccceee-CCCCCCCccc
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNL-CKESYMV-PPNPKVDPVS 230 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~-a~~~~~V-np~~~l~~~A 230 (515)
.+..|...++.+....+ ...++++|||.||++||+. ++.+++| |..+++++.+
T Consensus 164 ~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~ 220 (249)
T TIGR01485 164 QGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWY 220 (249)
T ss_pred CCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHH
Confidence 45578888877655432 3457999999999999998 7789998 5677777654
No 191
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=94.38 E-value=0.55 Score=47.19 Aligned_cols=159 Identities=12% Similarity=0.130 Sum_probs=94.0
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCe-eEEecCChhh
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKT-VRLTRDRATD 365 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~-i~idR~~~~~ 365 (515)
+++++|.|++...- ..++|+|+++=|...+|..........+...+.+. .+.+-.++. ..|. ..++ ....
T Consensus 89 ~~~~~~~e~l~~~~-~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~i~r~~~n~~~d~~~~~~R~~~g~~~i~~--~~~~ 165 (289)
T PRK08706 89 LVRYRNKHYLDDAL-AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLIG--RTEG 165 (289)
T ss_pred ceEEECHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHccCCCcEEeeCCCCHHHHHHHHHHHhccCCccccc--Chhh
Confidence 47788888764110 14679999999999999877544333456666665 455544432 2232 2223 2335
Q ss_pred HHHHHHHH-HcC-CeEEecCCeee-CCCccccc-------cchh----hccCCcEEEEEEEcCccCccCcccCCCccCCc
Q 042288 366 ASMIEKLL-EKG-DLVICPEGTTC-REPFLLRF-------SALF----AELTDEVVPVAMSNRMSMFHGTTARGWKGMDP 431 (515)
Q Consensus 366 ~~~~~~~l-~~G-~l~IFPEGTrs-~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~ 431 (515)
+..+.+.| ++| .+++.+.=.-. +++-..+| -+|. ...++||+|+.+.-...
T Consensus 166 ~r~i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~R~~~--------------- 230 (289)
T PRK08706 166 LRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREAD--------------- 230 (289)
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEEEcCC---------------
Confidence 77888889 466 56666543322 22333344 3331 45789999998865321
Q ss_pred cccccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCc
Q 042288 432 FYFFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYEC 481 (515)
Q Consensus 432 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~ 481 (515)
+ .+++++.||++.. .+++.++.++++-+.+++......
T Consensus 231 -------~-~~~i~i~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~P 268 (289)
T PRK08706 231 -------N-TVTLHFYPAWDSF----PSEDAQADAQRMNRFIEERVREHP 268 (289)
T ss_pred -------C-cEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCc
Confidence 1 2677788887653 245666777776666666544333
No 192
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.36 E-value=0.23 Score=45.17 Aligned_cols=100 Identities=21% Similarity=0.232 Sum_probs=59.0
Q ss_pred HHHHHHHhCCC-EEEEecCcHHHHH---HHHHhhc---C--Cc--EEEeceEEEeCcee----eeEEecCCccccccHHH
Q 042288 120 ETWRVFSSCGR-RCVLTANPRIMVE---AFLKDFL---G--AD--MVIGTEICVYKGRS----TGFVKSPGVLVGKNKAG 184 (515)
Q Consensus 120 ~~~~~l~~~G~-~vivSaS~~~~v~---~ia~~~l---G--id--~vigt~l~~~~G~~----tG~i~~~~~~~g~~K~~ 184 (515)
++++.++++|+ ++++||.+...++ ++.+. + | +. .++++ +|.+ ++++.... ..+-|.+
T Consensus 34 ~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~-----~g~~~~~~~~e~i~~~--~~~~K~~ 105 (157)
T smart00775 34 KLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLS-----PDRLFAALHREVISKK--PEVFKIA 105 (157)
T ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEc-----CCcchhhhhcccccCC--HHHHHHH
Confidence 45556777895 5669999988874 66665 2 2 32 33332 3322 23332211 1123555
Q ss_pred HHHHH---hcCCCCCceEEEeCCcCcHHHHhccccc----eeeCCCCCCC
Q 042288 185 ALMKM---LGDDEEMPDIGLGDRKTDSLFLNLCKES----YMVPPNPKVD 227 (515)
Q Consensus 185 ~l~~~---~~~~~~~~~~aygDS~~DlpmL~~a~~~----~~Vnp~~~l~ 227 (515)
.|+.. +...+.....+|||..+|....+.++-+ +.|||..+..
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~ 155 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVH 155 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCccc
Confidence 55544 4432233345799999999999998765 5788877654
No 193
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=94.26 E-value=0.55 Score=50.18 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=67.3
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhhHHHHHHHHHcC-CeEEe
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATDASMIEKLLEKG-DLVIC 381 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~~~~~~~~l~~G-~l~IF 381 (515)
.++|+|+++-|...+|..........++..+.+. .|.+-.++. ..|.-.|.. ...+..+.+.|++| .+.+-
T Consensus 138 ~gkGvIllt~H~GNWEl~~~~l~~~~p~~~vyRp~kNp~ld~li~~~R~r~G~~lI~~--~~giR~liraLk~G~~vgiL 215 (454)
T PRK05906 138 EQEGAILFCGHQANWELPFLYITKRYPGLAFAKPIKNRRLNKKIFSLRESFKGKIVPP--KNGINQALRALHQGEVVGIV 215 (454)
T ss_pred CCCCEEEEeehhhHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHhcCCeeecC--chHHHHHHHHHhcCCEEEEE
Confidence 4679999999999999865533333466677775 566655543 234334433 34578889999999 78888
Q ss_pred cCCeeeCCCccccc-------cchh----hccCCcEEEEEEEc
Q 042288 382 PEGTTCREPFLLRF-------SALF----AELTDEVVPVAMSN 413 (515)
Q Consensus 382 PEGTrs~~~~l~~F-------k~Gf----~~~~~pVvPV~i~~ 413 (515)
|.-.-..++...+| -+|. ...++||+|+.+.-
T Consensus 216 ~DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~R 258 (454)
T PRK05906 216 GDQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIYR 258 (454)
T ss_pred eCCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEEE
Confidence 76554334444455 2231 45689999988754
No 194
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=93.99 E-value=0.54 Score=47.66 Aligned_cols=118 Identities=14% Similarity=0.104 Sum_probs=72.8
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhh
Q 042288 292 VRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATD 365 (515)
Q Consensus 292 vrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~ 365 (515)
-+++++|.|.+...- ..++|+|+++=|...+|..........++..+.+. .+.+-.++. ..|.-.++++ .
T Consensus 106 ~~v~~~g~e~l~~a~-~~gkgvI~lt~H~GnwE~~~~~l~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~ 181 (305)
T PRK08025 106 KWFDVEGLDNLKRAQ-MQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNKLMEWVQTRGRMRSNKAMIGRN---N 181 (305)
T ss_pred CeEEEECHHHHHHHH-hCCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCCHHHHHHHHHHHhccCCcCcCcc---c
Confidence 477888988764110 14679999999999999976543333456667665 455555442 2343344322 2
Q ss_pred HHHHHHHHHcC-CeEEecCCeee-CCCccccc--------cchh----hccCCcEEEEEEEc
Q 042288 366 ASMIEKLLEKG-DLVICPEGTTC-REPFLLRF--------SALF----AELTDEVVPVAMSN 413 (515)
Q Consensus 366 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F--------k~Gf----~~~~~pVvPV~i~~ 413 (515)
+..+.+.|++| .+.+-|.=.-. +++...+| .+|. ...++||+|+.+..
T Consensus 182 ~r~~~~aLk~g~~v~il~DQ~~~~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~R 243 (305)
T PRK08025 182 LRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVR 243 (305)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEEE
Confidence 66788999999 77777543322 22233343 3331 44689999998754
No 195
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=93.85 E-value=0.043 Score=51.83 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=35.2
Q ss_pred ccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccceee
Q 042288 178 VGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
.|..|...++.++...+. ..++++|||.||++|++.++.++++
T Consensus 160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 467899998888765332 3479999999999999999999875
No 196
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=93.62 E-value=0.16 Score=60.32 Aligned_cols=44 Identities=11% Similarity=-0.034 Sum_probs=33.9
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPN 223 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~ 223 (515)
..++|.+-++.+-.. .+.....||+.||.|.|+.|+-+++..-.
T Consensus 786 sP~qK~~iV~~lq~~--g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 786 APDQKETLVELLQKL--DYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred CHHHHHHHHHHHHhC--CCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 456777777766443 34456679999999999999999998753
No 197
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=93.35 E-value=2.1 Score=43.11 Aligned_cols=162 Identities=12% Similarity=0.007 Sum_probs=92.0
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec--ccchhhhhh----cCCeeEEecCChhhH
Q 042288 293 RVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS--LSRLSELIS----PIKTVRLTRDRATDA 366 (515)
Q Consensus 293 rv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~g~~~~----~~~~i~idR~~~~~~ 366 (515)
.++++|.|++...- ..++|+|+++=|...++..........+...+.+. .+.+-.++. ..|.-.|. .+...+
T Consensus 95 ~~~~~g~e~l~~a~-~~gkgvI~lt~H~GnWE~~~~~~~~~~~~~~v~r~~~n~~~d~~~~~~R~~~g~~~i~-~~~~~~ 172 (295)
T PRK05645 95 VREVEGLEVLEQAL-ASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQLGNRVAP-STKEGI 172 (295)
T ss_pred eeEecCHHHHHHHH-hcCCCEEEEecchhhHHHHHHHHHhcCCCeEEEeCCCCHHHHHHHHHHhCCCCCeEee-cCcccH
Confidence 45778877753110 14678999999999999875433222344455544 455544433 23434442 223357
Q ss_pred HHHHHHHHcC-CeEEecCCeee-CCCcccccc-------ch-h---hccCCcEEEEEEEcCccCccCcccCCCccCCccc
Q 042288 367 SMIEKLLEKG-DLVICPEGTTC-REPFLLRFS-------AL-F---AELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFY 433 (515)
Q Consensus 367 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~G-f---~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~ 433 (515)
..+.+.|++| .+.|-+-=..+ .++...+|- ++ . ...++||+|+.+.-...
T Consensus 173 r~l~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~r~~~----------------- 235 (295)
T PRK05645 173 LSVIKEVRKGGQVGIPADPEPAESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLPD----------------- 235 (295)
T ss_pred HHHHHHHhcCCeEEEcCCCCCCCCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEEEcCC-----------------
Confidence 7888999999 77777554432 223334442 22 1 34689999998865311
Q ss_pred cccCCCCeEEEEEeccccCccccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 042288 434 FFMNPSPAYEVTFLNKLPYELTCSAGKSSHDVANYIQRLIATSLSYECT 482 (515)
Q Consensus 434 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ia~~l~~~~t 482 (515)
+..+++++.++++.. ..++..+.++.+-+.+++.......
T Consensus 236 -----~~~y~i~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~Pe 275 (295)
T PRK05645 236 -----GSGYKVILEAAPEDM----YSTDVEVSAAAMSKVVERYVRAYPS 275 (295)
T ss_pred -----CCeEEEEEecCCcCC----CCCCHHHHHHHHHHHHHHHHHcCcH
Confidence 112677776665432 2355566666666666655443333
No 198
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=92.38 E-value=1.2 Score=50.23 Aligned_cols=102 Identities=15% Similarity=0.058 Sum_probs=62.0
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhc-CCCccEEEecccchhhhhhcCCeeEEecC--C-hhhHHHHHHHHHcC-CeEEecC
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTAL-GRPIPAVTYSLSRLSELISPIKTVRLTRD--R-ATDASMIEKLLEKG-DLVICPE 383 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~-~~~~~~v~k~~~~~g~~~~~~~~i~idR~--~-~~~~~~~~~~l~~G-~l~IFPE 383 (515)
.++|+|+++-|.+.++........ ..++..+.+..... -...|.-.|..+ . ...+..+.+.|++| .|+|-|-
T Consensus 477 ~~kgvi~~t~H~gnwE~~~~~~~~~~~~~~~i~r~~~~~---R~~~g~~~i~~~~~~~~~~~r~i~~aLk~g~~v~il~D 553 (656)
T PRK15174 477 DQRGCIIVSAHLGAMYAGPMILSLLEMNSKWVASTPGVL---KGGYGERLISVSDKSEADVVRACMQTLHSGQSLVVAID 553 (656)
T ss_pred cCCCEEEEecCcchhhHHHHHHHHcCCCceeeecchHHH---HHhcCCceeccCCCCcchHHHHHHHHHHcCCeEEEEeC
Confidence 367999999999999997654333 23555565544321 123333344322 2 34477899999999 7777755
Q ss_pred CeeeCCCccccc-------cch-h---hccCCcEEEEEEEc
Q 042288 384 GTTCREPFLLRF-------SAL-F---AELTDEVVPVAMSN 413 (515)
Q Consensus 384 GTrs~~~~l~~F-------k~G-f---~~~~~pVvPV~i~~ 413 (515)
-.-..++...+| -.| + ...++||+|+....
T Consensus 554 q~~~~~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~~~ 594 (656)
T PRK15174 554 GALNLSAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVPIW 594 (656)
T ss_pred CCCCCCCceeccCCCccCcCcHHHHHHHHHCCCEEEeEEEE
Confidence 443222222233 444 2 45689999998843
No 199
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=92.27 E-value=0.37 Score=53.94 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=69.7
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEE-ec------------C----Ccccccc
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFV-KS------------P----GVLVGKN 181 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i-~~------------~----~~~~g~~ 181 (515)
++++.+++.| ++++|||-...-++.||++ +|+- +..-++..--+||+- +. . .| ..+.
T Consensus 591 ~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~---~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~-~P~H 665 (972)
T KOG0202|consen 591 DAIELCRQAGIRVIMITGDNKETAEAIARE-IGIF---SEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA-EPQH 665 (972)
T ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCC---cCCccccccccchhhhhcCCHHHHHHHhhcceEEEec-Cchh
Confidence 4566788899 6667999999999999999 9952 222223333455532 10 0 12 4456
Q ss_pred HHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCC-CCCCCcccc
Q 042288 182 KAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPP-NPKVDPVSQ 231 (515)
Q Consensus 182 K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 231 (515)
|.+-++.+-.. ...+.--||+.||-|-|+.|+-.++-.- .....+-|.
T Consensus 666 K~kIVeaLq~~--geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 666 KLKIVEALQSR--GEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred HHHHHHHHHhc--CCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 77777765443 3334446999999999999999999873 334554444
No 200
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=91.09 E-value=0.9 Score=54.09 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=64.8
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC---c-EEEeceEE-Ee--------------------------Cc-
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA---D-MVIGTEIC-VY--------------------------KG- 165 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi---d-~vigt~l~-~~--------------------------~G- 165 (515)
+++++.++++| +++++||-...-+..+|+. .|+ + .++--+-. .+ +.
T Consensus 637 ~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 715 (1057)
T TIGR01652 637 PETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNV 715 (1057)
T ss_pred HHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCce
Confidence 56777889999 7788999998999999998 885 1 11100000 00 00
Q ss_pred --eeeeEE-----------------------ecCCccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceee
Q 042288 166 --RSTGFV-----------------------KSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 166 --~~tG~i-----------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
.++|.. .--.+ ..++|.+-++..-... ...+.+.||+.||.|||+.|+-++.+
T Consensus 716 ~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~-sP~qK~~IV~~lk~~~-~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 716 ALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRV-SPSQKADVVRLVKKST-GKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred EEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCC-CHHHHHHHHHHHHhcC-CCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 123321 00012 4466776665543221 24578899999999999999999988
Q ss_pred CCCC
Q 042288 221 PPNP 224 (515)
Q Consensus 221 np~~ 224 (515)
.-..
T Consensus 794 ~g~e 797 (1057)
T TIGR01652 794 SGKE 797 (1057)
T ss_pred cChH
Confidence 6544
No 201
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=90.97 E-value=0.49 Score=47.02 Aligned_cols=46 Identities=22% Similarity=0.212 Sum_probs=37.1
Q ss_pred ccccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhcc----ccceeeCCC
Q 042288 178 VGKNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLC----KESYMVPPN 223 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a----~~~~~Vnp~ 223 (515)
.|..|..+++.++...+ ....+++||+.||.+||+.+ +.+++|...
T Consensus 171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred CCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 56789999998877643 23468899999999999999 889999654
No 202
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=90.86 E-value=1.6 Score=39.86 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=53.6
Q ss_pred HHHHHHHHhCC-CEEEEecC---------------cHHHHHHHHHhhcCCc--EEE-eceEEEeCceeeeEEecCCcccc
Q 042288 119 PETWRVFSSCG-RRCVLTAN---------------PRIMVEAFLKDFLGAD--MVI-GTEICVYKGRSTGFVKSPGVLVG 179 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS---------------~~~~v~~ia~~~lGid--~vi-gt~l~~~~G~~tG~i~~~~~~~g 179 (515)
.++++.++++| .++|+|.. ....++.+.+. +|+. .++ |..... + .+...
T Consensus 35 ~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~fd~ii~~~~~~~------~-----~~~~~ 102 (161)
T TIGR01261 35 IPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGIIFDDVLICPHFPD------D-----NCDCR 102 (161)
T ss_pred HHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCceeEEEECCCCCC------C-----CCCCC
Confidence 46677788899 55778875 45677888887 8864 332 211000 0 01011
Q ss_pred ccHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee
Q 042288 180 KNKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
.-|...++..+...+ ...++++|||.+|+..-+.++-..+.
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 223344444443322 23478999999999999988877653
No 203
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.24 E-value=4.5 Score=38.61 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHhchhhcCCCcHHHH--HHHHh-CC-CEEEEecCcHHHHHHHHHhhcCC----cEEEeceEEEeCceee
Q 042288 97 KVPSIESVARAVLPKFYSGDLHPETW--RVFSS-CG-RRCVLTANPRIMVEAFLKDFLGA----DMVIGTEICVYKGRST 168 (515)
Q Consensus 97 ~~~~l~~~~~~~~~~~~~~~~~~~~~--~~l~~-~G-~~vivSaS~~~~v~~ia~~~lGi----d~vigt~l~~~~G~~t 168 (515)
+.+|..+.+...++- .. +.|+.. +.|-+ .. +.|+-|-+...=+..+.+. ||+ |.++|-+. .|-.-+
T Consensus 82 d~deY~~~V~~~LPl--q~-LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~--~np~~~ 155 (244)
T KOG3109|consen 82 DADEYHRFVHGRLPL--QD-LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFET--LNPIEK 155 (244)
T ss_pred CHHHHHHHhhccCcH--hh-cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeec--cCCCCC
Confidence 466676666665552 11 444322 22222 22 3788899998888888888 997 44444332 111101
Q ss_pred eEEecCCccccccHH-HHHHHHhcCCCCCceEEEeCCcCcHH
Q 042288 169 GFVKSPGVLVGKNKA-GALMKMLGDDEEMPDIGLGDRKTDSL 209 (515)
Q Consensus 169 G~i~~~~~~~g~~K~-~~l~~~~~~~~~~~~~aygDS~~Dlp 209 (515)
--+ | ....++ +...+.++-.....++++-||.+-+.
T Consensus 156 ~~v----c-KP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~ 192 (244)
T KOG3109|consen 156 TVV----C-KPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQ 192 (244)
T ss_pred cee----e-cCCHHHHHHHHHHhCCCCcCceEEEcCchhhHH
Confidence 112 3 222221 22333344422345789999987543
No 204
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=90.22 E-value=2.1 Score=37.13 Aligned_cols=84 Identities=15% Similarity=0.217 Sum_probs=51.4
Q ss_pred HHHHHHHhCC-CEEEEecCc--------HHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHh
Q 042288 120 ETWRVFSSCG-RRCVLTANP--------RIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKML 190 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~--------~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~ 190 (515)
++++.++++| ..+|+|.+. ...++.+.++ +|++.... + +++.... -|.+.++..+
T Consensus 32 ~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~----~----~~~~~~K-------P~~~~~~~~~ 95 (132)
T TIGR01662 32 DALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVL----Y----ACPHCRK-------PKPGMFLEAL 95 (132)
T ss_pred HHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEE----E----ECCCCCC-------CChHHHHHHH
Confidence 4566777789 567799998 7788888888 88752111 1 1110111 1333333333
Q ss_pred cCC---CCCceEEEeC-CcCcHHHHhcccccee
Q 042288 191 GDD---EEMPDIGLGD-RKTDSLFLNLCKESYM 219 (515)
Q Consensus 191 ~~~---~~~~~~aygD-S~~DlpmL~~a~~~~~ 219 (515)
... +...++.+|| +.+|+.+-+.+|-..+
T Consensus 96 ~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i 128 (132)
T TIGR01662 96 KRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFI 128 (132)
T ss_pred HHcCCCChhheEEEcCCCcccHHHHHHCCCeEE
Confidence 322 1234788999 7999999998886654
No 205
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=90.11 E-value=0.16 Score=46.44 Aligned_cols=17 Identities=35% Similarity=0.624 Sum_probs=13.2
Q ss_pred eEEEEecCCccccCCCc
Q 042288 29 DTVVADVDGTLLRGRSS 45 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds~ 45 (515)
++|+||+||||+...|.
T Consensus 1 Kia~fD~DgTLi~~~s~ 17 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSG 17 (159)
T ss_dssp SEEEE-SCTTTEE-STS
T ss_pred CEEEEeCCCCccCCCCC
Confidence 58999999999998763
No 206
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=88.87 E-value=3.6 Score=39.85 Aligned_cols=80 Identities=14% Similarity=0.042 Sum_probs=42.6
Q ss_pred HHHHH---HHHhCCC-EEEEecCcHHH---HHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 119 PETWR---VFSSCGR-RCVLTANPRIM---VEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 119 ~~~~~---~l~~~G~-~vivSaS~~~~---v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
|++++ .++++|+ ++++||=.+.. .....+. .|++.. ..|..+.- .......-+-|.++-++...
T Consensus 123 p~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~--~~LiLR~~------~d~~~~~~~yKs~~R~~l~~ 193 (229)
T TIGR01675 123 PEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW--KHLILRGL------EDSNKTVVTYKSEVRKSLME 193 (229)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc--CeeeecCC------CCCCchHhHHHHHHHHHHHh
Confidence 55555 4567894 56699987766 4455555 788732 33433210 00000000116555555544
Q ss_pred CCCCCceEEEeCCcCcH
Q 042288 192 DDEEMPDIGLGDRKTDS 208 (515)
Q Consensus 192 ~~~~~~~~aygDS~~Dl 208 (515)
+ +..+....||..+|+
T Consensus 194 ~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 194 E-GYRIWGNIGDQWSDL 209 (229)
T ss_pred C-CceEEEEECCChHHh
Confidence 3 223345679999998
No 207
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=88.08 E-value=2.2 Score=39.31 Aligned_cols=99 Identities=15% Similarity=0.065 Sum_probs=54.6
Q ss_pred HHHHHHHHhCC-CEEEEecCcH---------------HHHHHHHHhhcCC--cEEEeceEEEeCceeeeEEecCCccccc
Q 042288 119 PETWRVFSSCG-RRCVLTANPR---------------IMVEAFLKDFLGA--DMVIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~---------------~~v~~ia~~~lGi--d~vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.++++| ..+|+|.++. .+++.+.++ +|+ +.++....... | ++++.. .|..+.
T Consensus 32 ~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~i~~~~~~~~-~--~~~~~~-~~~~~K 106 (176)
T TIGR00213 32 IDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVDLDGIYYCPHHPE-G--VEEFRQ-VCDCRK 106 (176)
T ss_pred HHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCCccEEEECCCCCc-c--cccccC-CCCCCC
Confidence 46777888899 5677888874 344455555 554 44443321111 1 111111 110122
Q ss_pred cHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccce--eeCC
Q 042288 181 NKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESY--MVPP 222 (515)
Q Consensus 181 ~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~--~Vnp 222 (515)
-+.+.+...+...+ ...++.+|||.+|+..=+.++-.. .|+.
T Consensus 107 P~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~ 152 (176)
T TIGR00213 107 PKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRT 152 (176)
T ss_pred CCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEec
Confidence 23444444443322 234788999999999999999875 4553
No 208
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=88.02 E-value=6.5 Score=38.72 Aligned_cols=86 Identities=23% Similarity=0.275 Sum_probs=51.5
Q ss_pred cHHHHHHHHhCCCEEE-EecCcHHHHHHHHHhh--cCCcEEEeceEEEeCcee----------------eeEEecCCccc
Q 042288 118 HPETWRVFSSCGRRCV-LTANPRIMVEAFLKDF--LGADMVIGTEICVYKGRS----------------TGFVKSPGVLV 178 (515)
Q Consensus 118 ~~~~~~~l~~~G~~vi-vSaS~~~~v~~ia~~~--lGid~vigt~l~~~~G~~----------------tG~i~~~~~~~ 178 (515)
.|+.++.++++|..++ +|+.+..+.....++. +|+|. ....--+++.+ .|-+- | .
T Consensus 86 ~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~f--s~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf---t-~ 159 (252)
T PF11019_consen 86 VPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDF--SSSSFPEDGIISFPVFDSALSRAPSFYDGILF---T-G 159 (252)
T ss_pred HHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCc--cccccccCcceecccccCCCCCCceeecCeEE---e-C
Confidence 3677788889996555 8998877766665531 57752 11110011111 12221 2 6
Q ss_pred cccHHHHHHHHhcCCCCCc--eEEEeCCcCcHH
Q 042288 179 GKNKAGALMKMLGDDEEMP--DIGLGDRKTDSL 209 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~~~--~~aygDS~~Dlp 209 (515)
|..|...|..++..-+..+ .++..|+...+.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~ 192 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLK 192 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHH
Confidence 7789999999988754333 677888876543
No 209
>PLN03190 aminophospholipid translocase; Provisional
Probab=87.46 E-value=1.9 Score=51.72 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=33.3
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKV 226 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 226 (515)
...+|.+-++..-.. ....+.|.||+.||.|||+.|+-++-+.-.+..
T Consensus 855 sP~QKa~IV~~vk~~-~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~ 902 (1178)
T PLN03190 855 APLQKAGIVALVKNR-TSDMTLAIGDGANDVSMIQMADVGVGISGQEGR 902 (1178)
T ss_pred CHHHHHHHHHHHHhc-CCcEEEEECCCcchHHHHHhcCeeeeecCchhH
Confidence 345665554443221 124578999999999999999999988765533
No 210
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.19 E-value=4.2 Score=39.53 Aligned_cols=14 Identities=43% Similarity=0.494 Sum_probs=12.6
Q ss_pred CeEEEEecCCcccc
Q 042288 28 KDTVVADVDGTLLR 41 (515)
Q Consensus 28 ~~lavFD~DgTL~~ 41 (515)
-++++||++|||+.
T Consensus 7 iravtfD~~~tLl~ 20 (237)
T KOG3085|consen 7 IRAVTFDAGGTLLA 20 (237)
T ss_pred eEEEEEeCCCceee
Confidence 46999999999997
No 211
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=86.88 E-value=0.88 Score=45.74 Aligned_cols=97 Identities=10% Similarity=-0.002 Sum_probs=59.2
Q ss_pred CCcHHHHH---HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-----EEeceEEEeCcee-eeEEecCCccccccHHHH
Q 042288 116 DLHPETWR---VFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-----VIGTEICVYKGRS-TGFVKSPGVLVGKNKAGA 185 (515)
Q Consensus 116 ~~~~~~~~---~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-----vigt~l~~~~G~~-tG~i~~~~~~~g~~K~~~ 185 (515)
..++.+.+ .++++| ..+++|+.+....+...+. ||++. ++|.+.. ..+ ...-.+. . ..+-+.+.
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~---~~~~~~~~~~k-p-~p~~~~~~ 260 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPD---MHFQREQGDKR-P-DDVVKEEI 260 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcch---hhhcccCCCCC-C-cHHHHHHH
Confidence 35666666 455789 5567999999999999986 77653 2333310 000 0000011 1 23345556
Q ss_pred HHHHhcCCCCCceEEEeCCcCcHHHHhcccccee
Q 042288 186 LMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYM 219 (515)
Q Consensus 186 l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~ 219 (515)
+++.... ....++++||+.+|+.+.+.+|-+++
T Consensus 261 l~~~~~~-~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 261 FWEKIAP-KYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHhcc-CceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 6654221 13557889999999999999998854
No 212
>COG3176 Putative hemolysin [General function prediction only]
Probab=85.58 E-value=1.3 Score=44.21 Aligned_cols=125 Identities=15% Similarity=0.124 Sum_probs=76.4
Q ss_pred HHHhHhcceEEEEcCCCCCCCCCCCCCCcEEEEeCCCCCCcHHHHHHhcCC---CccEEEec-ccchhhhhhcCCeeEEe
Q 042288 284 YYAFWALGVRVYIKGTPPPPAQKSSGQTGVLFICSHRTLLDPIFLSTALGR---PIPAVTYS-LSRLSELISPIKTVRLT 359 (515)
Q Consensus 284 ~~l~~~~Gvrv~v~G~e~~p~~~~~~~~~~IiVaNH~S~lD~~~l~~~~~~---~~~~v~k~-~~~~g~~~~~~~~i~id 359 (515)
+.+...+|.++...+.+.+| .++++++||||.-..|..++...+.. .+..++.. --..+.++.. .-+.|+
T Consensus 58 ~vf~~el~~~l~~~~~~~~~-----d~d~fd~VcnHlgv~Dg~~~~d~~~~~vgtyR~l~~~~A~r~~~~ys~-~ef~v~ 131 (292)
T COG3176 58 RVFSEELDARLDAAALERIP-----DQDRFDIVCNHLGVRDGVIVADLLKQLVGTYRLLANAQALRAGGFYSA-LEFPVD 131 (292)
T ss_pred hhhhhhcCcccccccccccC-----CCCCeeEeccccceecccchhhhHhhhcCceEEeehHHHHHhCCCccc-ccccee
Confidence 44445678888888888887 67899999999999999888665532 23444432 1111111111 122333
Q ss_pred c---CChh-h----HHHHHHHHHcC-CeEEecCCeeeC-CCccccccch---h----hccCCcEEEEEEEcC
Q 042288 360 R---DRAT-D----ASMIEKLLEKG-DLVICPEGTTCR-EPFLLRFSAL---F----AELTDEVVPVAMSNR 414 (515)
Q Consensus 360 R---~~~~-~----~~~~~~~l~~G-~l~IFPEGTrs~-~~~l~~Fk~G---f----~~~~~pVvPV~i~~~ 414 (515)
. ..+. . +.-+.+.+++| .+++||-|--.. ..+-..-..| + ...+.++.|+.+++.
T Consensus 132 ~~~~~~~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~g~~~~~~gcaS~~~~~~~~~a~~~p~~~~~r 203 (292)
T COG3176 132 WLEELRPKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDKGRLDDMPGCASVPGLPRKHGAALAPVHHNGR 203 (292)
T ss_pred eecccChHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhccCcccCccccccccchhhcccccchhheecc
Confidence 3 2222 2 33455678899 999999997762 1122233334 2 235789999999973
No 213
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=84.99 E-value=4.5 Score=37.31 Aligned_cols=26 Identities=12% Similarity=-0.046 Sum_probs=21.4
Q ss_pred CceEEEeCCcCcHHHHhccccceeeC
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMVP 221 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~Vn 221 (515)
..++.+|||.+|+..-+.+|-..+..
T Consensus 121 ~~~~~VgDs~~Di~~A~~aG~~~i~v 146 (181)
T PRK08942 121 AGSPMVGDSLRDLQAAAAAGVTPVLV 146 (181)
T ss_pred hhEEEEeCCHHHHHHHHHCCCeEEEE
Confidence 44788999999999999999765543
No 214
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=84.87 E-value=0.57 Score=41.00 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=13.2
Q ss_pred CeEEEEecCCccccC
Q 042288 28 KDTVVADVDGTLLRG 42 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ 42 (515)
|++++||+||||+..
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 578999999999874
No 215
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=84.70 E-value=0.52 Score=43.42 Aligned_cols=79 Identities=15% Similarity=0.080 Sum_probs=37.9
Q ss_pred HHHHHHHHhCC-CEEEEecC-cHHHHHHHHHhhcCCcE--EEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 119 PETWRVFSSCG-RRCVLTAN-PRIMVEAFLKDFLGADM--VIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS-~~~~v~~ia~~~lGid~--vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
+++++.++++| ...++|-+ ...+++.+.+. |+++. ..+..+ ...+...-.++ ..|...+++....-+
T Consensus 51 ~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~---~~~F~~~eI~~-----gsK~~Hf~~i~~~tg 121 (169)
T PF12689_consen 51 PEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPL---IEYFDYLEIYP-----GSKTTHFRRIHRKTG 121 (169)
T ss_dssp HHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C-------------CCECEEEESS-----S-HHHHHHHHHHHH-
T ss_pred HHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccc---hhhcchhheec-----CchHHHHHHHHHhcC
Confidence 45666778899 66778854 34588888887 89871 111111 12233323332 258887776654322
Q ss_pred CC--ceEEEeCCcC
Q 042288 195 EM--PDIGLGDRKT 206 (515)
Q Consensus 195 ~~--~~~aygDS~~ 206 (515)
.. ...++=|-..
T Consensus 122 I~y~eMlFFDDe~~ 135 (169)
T PF12689_consen 122 IPYEEMLFFDDESR 135 (169)
T ss_dssp --GGGEEEEES-HH
T ss_pred CChhHEEEecCchh
Confidence 22 2456666543
No 216
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=84.62 E-value=0.63 Score=46.56 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=27.0
Q ss_pred HHHHHHHhCCC-EEEEecCcHHHHHHHHHhhcCCcE
Q 042288 120 ETWRVFSSCGR-RCVLTANPRIMVEAFLKDFLGADM 154 (515)
Q Consensus 120 ~~~~~l~~~G~-~vivSaS~~~~v~~ia~~~lGid~ 154 (515)
++++.++++|. .+|+|++....++...++ +|++.
T Consensus 153 EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~ 187 (301)
T TIGR01684 153 DSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDR 187 (301)
T ss_pred HHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCc
Confidence 44556777894 577999999999999998 99874
No 217
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=84.33 E-value=4 Score=42.24 Aligned_cols=94 Identities=16% Similarity=0.199 Sum_probs=55.3
Q ss_pred HHHHHHHHhCC-CEEEEecC---------------cHHHHHHHHHhhcCCc--EE-EeceEEEeCceeeeEEecCCcccc
Q 042288 119 PETWRVFSSCG-RRCVLTAN---------------PRIMVEAFLKDFLGAD--MV-IGTEICVYKGRSTGFVKSPGVLVG 179 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS---------------~~~~v~~ia~~~lGid--~v-igt~l~~~~G~~tG~i~~~~~~~g 179 (515)
.++++.++++| ..+|+|.. +..++.++.+. +|+. .+ ++.... ...|..+
T Consensus 36 ~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~fd~i~i~~~~~-----------sd~~~~r 103 (354)
T PRK05446 36 IPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIKFDEVLICPHFP-----------EDNCSCR 103 (354)
T ss_pred HHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCceeeEEEeCCcC-----------cccCCCC
Confidence 45666788889 56778884 34556777777 7763 22 221110 0111122
Q ss_pred ccHHHHHHHHhcCC--CCCceEEEeCCcCcHHHHhcccccee-eCCCC
Q 042288 180 KNKAGALMKMLGDD--EEMPDIGLGDRKTDSLFLNLCKESYM-VPPNP 224 (515)
Q Consensus 180 ~~K~~~l~~~~~~~--~~~~~~aygDS~~DlpmL~~a~~~~~-Vnp~~ 224 (515)
.-|...+...+... +...++.+|||.+|+..-+.++-..+ |||+.
T Consensus 104 KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~ 151 (354)
T PRK05446 104 KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARET 151 (354)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCC
Confidence 33444555444331 12457889999999999998887654 67643
No 218
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=84.24 E-value=5.1 Score=35.69 Aligned_cols=91 Identities=19% Similarity=0.143 Sum_probs=52.3
Q ss_pred HHHHHHHHhCC-CEEEEecCcH---------------HHHHHHHHhhcCCcE--EEeceEEEeCceeeeEEecCCccccc
Q 042288 119 PETWRVFSSCG-RRCVLTANPR---------------IMVEAFLKDFLGADM--VIGTEICVYKGRSTGFVKSPGVLVGK 180 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~---------------~~v~~ia~~~lGid~--vigt~l~~~~G~~tG~i~~~~~~~g~ 180 (515)
.++++.++++| ..+|+|.+.. ..++.+.+. +|+.. .+-+.. .+....+ + ..
T Consensus 33 ~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~------~~~~~~~--~--~K 101 (147)
T TIGR01656 33 VPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPH------HPADNCS--C--RK 101 (147)
T ss_pred HHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCC------CCCCCCC--C--CC
Confidence 35677788899 5577888763 466777787 88751 111100 0000000 1 12
Q ss_pred cHHHHHHHHhcCCC--CCceEEEeCCcCcHHHHhccccceee
Q 042288 181 NKAGALMKMLGDDE--EMPDIGLGDRKTDSLFLNLCKESYMV 220 (515)
Q Consensus 181 ~K~~~l~~~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~V 220 (515)
-|.+.++..+...+ ...++.+|||..|+..-+.++-..+.
T Consensus 102 P~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~ 143 (147)
T TIGR01656 102 PKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVL 143 (147)
T ss_pred CCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEE
Confidence 24445555544322 23378899999999988888776543
No 219
>PLN02423 phosphomannomutase
Probab=84.00 E-value=1.4 Score=43.19 Aligned_cols=41 Identities=20% Similarity=0.014 Sum_probs=33.1
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeC----CcCcHHHHhc-cccceeeC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGD----RKTDSLFLNL-CKESYMVP 221 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygD----S~~DlpmL~~-a~~~~~Vn 221 (515)
.|..|..+|+.++ . ...++|+|| +.||++||+. .-..+.|.
T Consensus 186 ~gvnKg~al~~L~-~--~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 186 QGWDKTYCLQFLE-D--FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCCCHHHHHHHhc-C--cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 6778999999998 3 577899999 7999999997 44445553
No 220
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=83.22 E-value=2.6 Score=41.12 Aligned_cols=58 Identities=19% Similarity=0.156 Sum_probs=39.0
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhcc--------ccceeeC
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLC--------KESYMVP 221 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a--------~~~~~Vn 221 (515)
+.+..|...-++.. .+..|...++..+...+. ...++.||+.+|.+|++.+ +.++.|.
T Consensus 150 ~~v~~g~~~~e~~p----~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 150 LEVMDGKAVVELKP----RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred EEEEECCeEEEEee----CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 44444444444443 355788888887765432 3468899999999999988 4566665
No 221
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=83.15 E-value=1 Score=44.75 Aligned_cols=16 Identities=31% Similarity=0.268 Sum_probs=13.8
Q ss_pred CCeEEEEecCCccccC
Q 042288 27 EKDTVVADVDGTLLRG 42 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ 42 (515)
...+++||+||||++.
T Consensus 13 ~~~li~~D~DGTLl~~ 28 (266)
T PRK10187 13 ANYAWFFDLDGTLAEI 28 (266)
T ss_pred CCEEEEEecCCCCCCC
Confidence 3689999999999983
No 222
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=82.94 E-value=0.0053 Score=60.71 Aligned_cols=174 Identities=14% Similarity=0.055 Sum_probs=99.0
Q ss_pred CCcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChhh---HHHHHHHH----HcC--
Q 042288 310 QTGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRATD---ASMIEKLL----EKG-- 376 (515)
Q Consensus 310 ~~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~~---~~~~~~~l----~~G-- 376 (515)
++++=.++||.|+.|..+-+.+. -..|++++ ++..|..-.+-+.+.+.|..... +......+ .+-
T Consensus 185 d~t~edc~l~vs~gql~lpm~a~--l~eF~~~~r~lkL~~~gl~k~ld~y~~var~~kg~~igi~efa~~l~vpvsd~l~ 262 (412)
T KOG4666|consen 185 DRTGEDCSLHVSYGQLLLPMSAS--LPEFVAKRRVLKLPLVGLIKKLDGYVYVAREAKGPDIGIVEFAVNLRVPVSDKLA 262 (412)
T ss_pred CCchHHHHHHHhhccEecccccc--hHHHHHHHhccCCChHHHHHHHhhHHHHHHhccCCCcceeEeeeeeecchhhhhh
Confidence 45677889999999987654432 12444443 56666655566777776654422 11111111 111
Q ss_pred -CeEEecCCeeeCCCccccccchhhccCCcEEEEEEEcCccCccCcccCCCccCCccccccCC---CCeEEEEEeccccC
Q 042288 377 -DLVICPEGTTCREPFLLRFSALFAELTDEVVPVAMSNRMSMFHGTTARGWKGMDPFYFFMNP---SPAYEVTFLNKLPY 452 (515)
Q Consensus 377 -~l~IFPEGTrs~~~~l~~Fk~Gf~~~~~pVvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~v~V~~l~pi~~ 452 (515)
-..+|||||++++.-..-|+.+.+-++-|+.|+.|.+...++... ..|....+.+..+.+- -..++|..+=|--.
T Consensus 263 ~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~-eDg~~ge~~ls~ilq~~lgv~~l~v~~lf~~i~ 341 (412)
T KOG4666|consen 263 PTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVA-EDGISGEHILSLILQVVLGVEVLRVPVLFPSIE 341 (412)
T ss_pred hhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccc-cccccchHHHHHHHHHhcCcceeeccccchhhh
Confidence 467999999999988888888888899999999999943333211 0111111222222221 12234433322111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHH
Q 042288 453 ELTCSAGKSSHDVANYIQRLIATSLSYECTSFTRKDKYR 491 (515)
Q Consensus 453 ~~~~~~~~~~~~la~~v~~~ia~~l~~~~t~~t~~d~~~ 491 (515)
++.+++-.+...++-++..=++..+..++-|+..
T Consensus 342 -----q~d~~ki~~~~f~~fa~~~p~~a~~~~~yld~~~ 375 (412)
T KOG4666|consen 342 -----QKDDPKIYASNFRKFAATEPNLALSELGYLDKRI 375 (412)
T ss_pred -----cccCcceeHHHHHHHHHhCchhhhhhhccccchh
Confidence 2566677788888887776555554444545543
No 223
>PLN02423 phosphomannomutase
Probab=81.91 E-value=0.85 Score=44.67 Aligned_cols=19 Identities=42% Similarity=0.555 Sum_probs=14.5
Q ss_pred CCCe-EEEEecCCccccCCC
Q 042288 26 REKD-TVVADVDGTLLRGRS 44 (515)
Q Consensus 26 ~~~~-lavFD~DgTL~~~ds 44 (515)
+.++ +++||+||||++.+.
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~ 23 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRK 23 (245)
T ss_pred CccceEEEEeccCCCcCCCC
Confidence 4556 555999999998764
No 224
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=81.91 E-value=4.8 Score=41.48 Aligned_cols=90 Identities=20% Similarity=0.121 Sum_probs=53.2
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhc-C-----------CcEEEeceEE------------Ee--Cceee-eE-
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFL-G-----------ADMVIGTEIC------------VY--KGRST-GF- 170 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~l-G-----------id~vigt~l~------------~~--~G~~t-G~- 170 (515)
++++.++++| ...|+|.|+..+++.+.+. + | +|.|++..-. ++ +|... +.
T Consensus 191 elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~~~~~ 269 (343)
T TIGR02244 191 LFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLKWGEV 269 (343)
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCcccCCcc
Confidence 3445667899 6688999999999999997 5 5 4666654321 11 12111 11
Q ss_pred --EecCCccccccHHHHHHHHhcCCCCCceEEEeCC-cCcHHHHh
Q 042288 171 --VKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDR-KTDSLFLN 212 (515)
Q Consensus 171 --i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS-~~DlpmL~ 212 (515)
+....+ +..|=+..+.+.++.. ...++.+||+ .+|+---+
T Consensus 270 ~~l~~g~v-Y~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~k 312 (343)
T TIGR02244 270 DGLEPGKV-YSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSK 312 (343)
T ss_pred ccccCCCe-EeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhH
Confidence 111112 4455566777777653 2446668998 47765443
No 225
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=81.81 E-value=0.83 Score=43.80 Aligned_cols=33 Identities=24% Similarity=0.163 Sum_probs=24.3
Q ss_pred HHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-EEEe
Q 042288 124 VFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-MVIG 157 (515)
Q Consensus 124 ~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~vig 157 (515)
.++++| +.+++||=+...++++++. +|++ .+++
T Consensus 31 ~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~i~ 65 (230)
T PRK01158 31 KAEKLGIPVILATGNVLCFARAAAKL-IGTSGPVIA 65 (230)
T ss_pred HHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCcEEE
Confidence 344578 5566899998889999988 8986 3444
No 226
>PTZ00174 phosphomannomutase; Provisional
Probab=81.69 E-value=0.93 Score=44.38 Aligned_cols=17 Identities=47% Similarity=0.690 Sum_probs=15.0
Q ss_pred CeEEEEecCCccccCCC
Q 042288 28 KDTVVADVDGTLLRGRS 44 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds 44 (515)
.++++||+||||+..+.
T Consensus 5 ~klia~DlDGTLL~~~~ 21 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN 21 (247)
T ss_pred CeEEEEECcCCCcCCCC
Confidence 68999999999998654
No 227
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=81.63 E-value=6.4 Score=36.11 Aligned_cols=78 Identities=19% Similarity=0.141 Sum_probs=47.7
Q ss_pred HHHHHHHhCC-CEEEEecCc-HHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC--C
Q 042288 120 ETWRVFSSCG-RRCVLTANP-RIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE--E 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~-~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~--~ 195 (515)
++++.++++| .++|+|.+. ...++.+.+. +|+.... +.. .| +.+.+...+...+ .
T Consensus 50 e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~------------~~~-KP-------~p~~~~~~l~~~~~~~ 108 (170)
T TIGR01668 50 DWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP------------HAV-KP-------PGCAFRRAHPEMGLTS 108 (170)
T ss_pred HHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc------------CCC-CC-------ChHHHHHHHHHcCCCH
Confidence 4456777888 567899988 7888888887 8875321 000 11 2223333332211 2
Q ss_pred CceEEEeCCc-CcHHHHhccccce
Q 042288 196 MPDIGLGDRK-TDSLFLNLCKESY 218 (515)
Q Consensus 196 ~~~~aygDS~-~DlpmL~~a~~~~ 218 (515)
..++.+|||. .|+..-+.+|-..
T Consensus 109 ~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 109 EQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred HHEEEECCcchHHHHHHHHcCCeE
Confidence 3478899998 7998777666543
No 228
>PRK06769 hypothetical protein; Validated
Probab=81.19 E-value=6.4 Score=36.23 Aligned_cols=92 Identities=20% Similarity=0.187 Sum_probs=50.8
Q ss_pred HHHHHHHHhCC-CEEEEecCcHH---------HHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHH
Q 042288 119 PETWRVFSSCG-RRCVLTANPRI---------MVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMK 188 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~---------~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~ 188 (515)
.+.++.++++| +.+|+|.+... +.+. .+. +|++.++-+.....++ +-...-+.+.++.
T Consensus 34 ~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~-l~~-~g~~~~~~~~~~~~~~----------~~~~KP~p~~~~~ 101 (173)
T PRK06769 34 KASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE-LKG-FGFDDIYLCPHKHGDG----------CECRKPSTGMLLQ 101 (173)
T ss_pred HHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH-HHh-CCcCEEEECcCCCCCC----------CCCCCCCHHHHHH
Confidence 45666788899 56788887642 2333 455 7887654221110000 0011112334444
Q ss_pred HhcCCC--CCceEEEeCCcCcHHHHhcccccee-eCC
Q 042288 189 MLGDDE--EMPDIGLGDRKTDSLFLNLCKESYM-VPP 222 (515)
Q Consensus 189 ~~~~~~--~~~~~aygDS~~DlpmL~~a~~~~~-Vnp 222 (515)
.+...+ ...++.+|||..|+..=+.+|-..+ |+.
T Consensus 102 ~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~ 138 (173)
T PRK06769 102 AAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRT 138 (173)
T ss_pred HHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEec
Confidence 433221 2347889999999999888876654 544
No 229
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=80.87 E-value=3.6 Score=36.82 Aligned_cols=85 Identities=20% Similarity=0.096 Sum_probs=46.8
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHH---HHHHHhcCCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAG---ALMKMLGDDEE 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~---~l~~~~~~~~~ 195 (515)
+.+++++ ++ ...|+|++...+++.+.+. +|++..+-..+... ..| ...|.. .++. ++. ..
T Consensus 52 e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~----------~d~--~~~KP~~~k~l~~-l~~-~p 115 (148)
T smart00577 52 EFLKRAS-ELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFR----------DEC--VFVKGKYVKDLSL-LGR-DL 115 (148)
T ss_pred HHHHHHH-hccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEEC----------ccc--cccCCeEeecHHH-cCC-Ch
Confidence 4445565 56 5678999999999999997 87632111111110 011 111211 2222 232 13
Q ss_pred CceEEEeCCcCcHHHHhccccceeeCC
Q 042288 196 MPDIGLGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 196 ~~~~aygDS~~DlpmL~~a~~~~~Vnp 222 (515)
..++.+|||.+|..+-. .+.+.|.|
T Consensus 116 ~~~i~i~Ds~~~~~aa~--~ngI~i~~ 140 (148)
T smart00577 116 SNVIIIDDSPDSWPFHP--ENLIPIKP 140 (148)
T ss_pred hcEEEEECCHHHhhcCc--cCEEEecC
Confidence 45888999999988543 34455543
No 230
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=80.63 E-value=0.8 Score=41.64 Aligned_cols=14 Identities=36% Similarity=0.783 Sum_probs=12.6
Q ss_pred EEEEecCCccccCC
Q 042288 30 TVVADVDGTLLRGR 43 (515)
Q Consensus 30 lavFD~DgTL~~~d 43 (515)
+++||+||||+.++
T Consensus 1 iVisDIDGTL~~sd 14 (157)
T smart00775 1 IVISDIDGTITKSD 14 (157)
T ss_pred CEEEecCCCCcccc
Confidence 57999999999976
No 231
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.25 E-value=2.2 Score=41.49 Aligned_cols=119 Identities=10% Similarity=-0.003 Sum_probs=72.9
Q ss_pred HcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC---cEEEeceEEEe-Ccee
Q 042288 93 FAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA---DMVIGTEICVY-KGRS 167 (515)
Q Consensus 93 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi---d~vigt~l~~~-~G~~ 167 (515)
-.|.+..++++.+.+.-.. ...-+.+..+.|++.+ .+.|.||+.-..++.+.++-++. -+++++-+.++ +|.+
T Consensus 120 q~~f~k~~I~~~Va~s~i~--lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l 197 (298)
T KOG3128|consen 120 QGGFSKNAIDDIVAESNIA--LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNL 197 (298)
T ss_pred cCCcCHHHHHHHHHHhhHH--HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchh
Confidence 4567888888877765321 1112456677888899 56678999888888888763443 36778888775 5553
Q ss_pred ---eeEEecCCccccccHHHHH-HHHhcCCC-CCceEEEeCCcCcHHHHhccc
Q 042288 168 ---TGFVKSPGVLVGKNKAGAL-MKMLGDDE-EMPDIGLGDRKTDSLFLNLCK 215 (515)
Q Consensus 168 ---tG~i~~~~~~~g~~K~~~l-~~~~~~~~-~~~~~aygDS~~DlpmL~~a~ 215 (515)
.+.+....| ...|+-.. .+++.... ......-|||.+|+.|=+-|.
T Consensus 198 ~gF~~~Lihtfn--kn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~ 248 (298)
T KOG3128|consen 198 CGFSQPLIHTFN--KNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGVP 248 (298)
T ss_pred hhhhHHHHHHHc--cchHHHHhhhHHHhhccCCceEEEeccccccchhhcCCc
Confidence 334433222 22333322 33333221 233567899999999977543
No 232
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=79.21 E-value=4.4 Score=46.27 Aligned_cols=45 Identities=24% Similarity=0.273 Sum_probs=34.4
Q ss_pred ccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhcc---ccceeeCC
Q 042288 178 VGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLC---KESYMVPP 222 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a---~~~~~Vnp 222 (515)
.|-.|...++..+...+....+++||+.||.+||+.+ +.++.|..
T Consensus 654 ~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~ 701 (726)
T PRK14501 654 AGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP 701 (726)
T ss_pred CCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC
Confidence 4557999988887643345578999999999999986 56666654
No 233
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=78.95 E-value=1.1 Score=38.96 Aligned_cols=14 Identities=50% Similarity=0.662 Sum_probs=12.3
Q ss_pred eEEEEecCCccccC
Q 042288 29 DTVVADVDGTLLRG 42 (515)
Q Consensus 29 ~lavFD~DgTL~~~ 42 (515)
++++||+||||+++
T Consensus 1 k~~~~D~dgtL~~~ 14 (132)
T TIGR01662 1 KGVVLDLDGTLTDD 14 (132)
T ss_pred CEEEEeCCCceecC
Confidence 58999999999963
No 234
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=76.80 E-value=1.1 Score=37.43 Aligned_cols=17 Identities=35% Similarity=0.741 Sum_probs=13.6
Q ss_pred EEEecCCccccCCCchH
Q 042288 31 VVADVDGTLLRGRSSFP 47 (515)
Q Consensus 31 avFD~DgTL~~~ds~~~ 47 (515)
++||+||||+.++..++
T Consensus 1 ~l~D~dGvl~~g~~~ip 17 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIP 17 (101)
T ss_dssp EEEESTTTSEETTEE-T
T ss_pred CEEeCccEeEeCCCcCc
Confidence 58999999999887543
No 235
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=75.93 E-value=1.6 Score=43.73 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=25.4
Q ss_pred HHHHHHHhCCC-EEEEecCcHHHHHHHHHhhcCCc
Q 042288 120 ETWRVFSSCGR-RCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 120 ~~~~~l~~~G~-~vivSaS~~~~v~~ia~~~lGid 153 (515)
++++.++++|. .+|+|.+....++.+.+. +|++
T Consensus 155 EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~ 188 (303)
T PHA03398 155 DSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLE 188 (303)
T ss_pred HHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCC
Confidence 44556777894 567898888888889898 8876
No 236
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=75.59 E-value=1.5 Score=39.67 Aligned_cols=15 Identities=40% Similarity=0.632 Sum_probs=13.1
Q ss_pred CeEEEEecCCccccC
Q 042288 28 KDTVVADVDGTLLRG 42 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ 42 (515)
.++++||+||||++.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 478999999999983
No 237
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=74.88 E-value=1.8 Score=38.66 Aligned_cols=17 Identities=24% Similarity=0.313 Sum_probs=14.6
Q ss_pred eEEEEecCCccccCCCc
Q 042288 29 DTVVADVDGTLLRGRSS 45 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds~ 45 (515)
++.+||+||||+.+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~ 17 (147)
T TIGR01656 1 PALFLDRDGVINEDTVS 17 (147)
T ss_pred CeEEEeCCCceeccCCc
Confidence 36899999999998874
No 238
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=74.46 E-value=1.8 Score=39.10 Aligned_cols=16 Identities=38% Similarity=0.665 Sum_probs=14.6
Q ss_pred CeEEEEecCCccccCC
Q 042288 28 KDTVVADVDGTLLRGR 43 (515)
Q Consensus 28 ~~lavFD~DgTL~~~d 43 (515)
-++++||+||||++|.
T Consensus 8 IkLli~DVDGvLTDG~ 23 (170)
T COG1778 8 IKLLILDVDGVLTDGK 23 (170)
T ss_pred ceEEEEeccceeecCe
Confidence 5899999999999985
No 239
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=74.03 E-value=1.6 Score=39.70 Aligned_cols=49 Identities=20% Similarity=0.290 Sum_probs=35.3
Q ss_pred cccHHHHHHHHhcC---CCCCceEEEeCCcCcHHHHhccccc----eeeCCCCCCC
Q 042288 179 GKNKAGALMKMLGD---DEEMPDIGLGDRKTDSLFLNLCKES----YMVPPNPKVD 227 (515)
Q Consensus 179 g~~K~~~l~~~~~~---~~~~~~~aygDS~~DlpmL~~a~~~----~~Vnp~~~l~ 227 (515)
.+-|...|+..... .+.....+||+..+|+.--+.++-| +.|||..++.
T Consensus 100 ~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~~~ 155 (157)
T PF08235_consen 100 EEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGEVK 155 (157)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCeEe
Confidence 34588887776543 2234467899999999999988766 5678876654
No 240
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=73.60 E-value=1.7 Score=40.49 Aligned_cols=16 Identities=31% Similarity=0.588 Sum_probs=14.5
Q ss_pred CCeEEEEecCCccccC
Q 042288 27 EKDTVVADVDGTLLRG 42 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ 42 (515)
..++++||+||||+++
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4789999999999986
No 241
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=70.51 E-value=2.2 Score=40.11 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=20.6
Q ss_pred HHHHHhCC-CEEEEecCcHHHHHHHHHhhcC
Q 042288 122 WRVFSSCG-RRCVLTANPRIMVEAFLKDFLG 151 (515)
Q Consensus 122 ~~~l~~~G-~~vivSaS~~~~v~~ia~~~lG 151 (515)
++.++++| ..+++||.....++.+++. ++
T Consensus 26 l~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~ 55 (204)
T TIGR01484 26 LERLREAGVKVVLVTGRSLAEIKELLKQ-LP 55 (204)
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHHh-CC
Confidence 33455567 5567899888888888876 55
No 242
>PLN02580 trehalose-phosphatase
Probab=69.17 E-value=11 Score=39.48 Aligned_cols=60 Identities=22% Similarity=0.185 Sum_probs=39.2
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCC---c--eEEEeCCcCcHHHHhc-----cccceeeCC
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEM---P--DIGLGDRKTDSLFLNL-----CKESYMVPP 222 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~---~--~~aygDS~~DlpmL~~-----a~~~~~Vnp 222 (515)
+.+..|+..=++... .+-.|-.+++.++...+.. . .+++||+.||.+||+. ++.+|+|..
T Consensus 283 l~v~~Gk~vlEVrP~---~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn 352 (384)
T PLN02580 283 LRLTHGRKVLEVRPV---IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS 352 (384)
T ss_pred eEEEeCCeEEEEecC---CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec
Confidence 444455544444431 2557888888887653221 1 2689999999999996 466777764
No 243
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=67.24 E-value=3 Score=38.45 Aligned_cols=16 Identities=44% Similarity=0.715 Sum_probs=14.5
Q ss_pred CeEEEEecCCccccCC
Q 042288 28 KDTVVADVDGTLLRGR 43 (515)
Q Consensus 28 ~~lavFD~DgTL~~~d 43 (515)
-++.+||+||||+++.
T Consensus 7 i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 7 IKLVILDVDGVMTDGR 22 (169)
T ss_pred CeEEEEeCceeeECCe
Confidence 6899999999999973
No 244
>PRK10444 UMP phosphatase; Provisional
Probab=66.93 E-value=2.9 Score=41.00 Aligned_cols=19 Identities=32% Similarity=0.749 Sum_probs=15.5
Q ss_pred eEEEEecCCccccCCCchH
Q 042288 29 DTVVADVDGTLLRGRSSFP 47 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds~~~ 47 (515)
+.++||+||||+.++..++
T Consensus 2 ~~v~~DlDGtL~~~~~~~p 20 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVP 20 (248)
T ss_pred cEEEEeCCCceEeCCeeCc
Confidence 5789999999999875433
No 245
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=66.23 E-value=17 Score=40.50 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=38.9
Q ss_pred ccccccHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeC-CCCCCCcccc
Q 042288 176 VLVGKNKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVP-PNPKVDPVSQ 231 (515)
Q Consensus 176 ~~~g~~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 231 (515)
| ...+|++..+..-+.. .....|.||+-||+.|.+.|+-++-|- ...+=+.+|.
T Consensus 764 c-tPtQKA~v~~llq~~t-~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 764 C-TPTQKAQVVRLLQKKT-GKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred c-ChhHHHHHHHHHHHhh-CceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 6 6778887665554432 133678999999999999999998764 4455666776
No 246
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=65.17 E-value=20 Score=34.76 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=44.5
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHH--HHHHhhcCCcE-EEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC-
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVE--AFLKDFLGADM-VIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE- 194 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~--~ia~~~lGid~-vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~- 194 (515)
++++.++++| ..+++|.++....+ ...+. +|++. .+ + ..+| .+..-...++..+.+.+
T Consensus 31 e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~--~-----~Ii~---------s~~~~~~~l~~~~~~~~~ 93 (242)
T TIGR01459 31 QNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLP--E-----MIIS---------SGEIAVQMILESKKRFDI 93 (242)
T ss_pred HHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCcccc--c-----eEEc---------cHHHHHHHHHhhhhhccC
Confidence 4555677889 56778888776555 56676 88762 11 1 1111 12111233333222211
Q ss_pred -CCceEEEeCCcCcHHHHhcccc
Q 042288 195 -EMPDIGLGDRKTDSLFLNLCKE 216 (515)
Q Consensus 195 -~~~~~aygDS~~DlpmL~~a~~ 216 (515)
...++..||+..|+.-++.++.
T Consensus 94 ~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 94 RNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred CCceEEEeCCcccchhhhcCCCc
Confidence 2347889999999988865543
No 247
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=65.08 E-value=3.3 Score=40.62 Aligned_cols=18 Identities=28% Similarity=0.656 Sum_probs=15.2
Q ss_pred eEEEEecCCccccCCCch
Q 042288 29 DTVVADVDGTLLRGRSSF 46 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds~~ 46 (515)
+.++||+||||+.++..+
T Consensus 2 ~~~~~D~DGtl~~~~~~i 19 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERI 19 (249)
T ss_pred CEEEEeCCCceEcCCeeC
Confidence 578999999999987643
No 248
>PLN02887 hydrolase family protein
Probab=65.06 E-value=3.7 Score=45.37 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=23.7
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
+++.++++| +++++||=+..-+.++.+. +|++
T Consensus 333 AI~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~ 365 (580)
T PLN02887 333 ALKEALSRGVKVVIATGKARPAVIDILKM-VDLA 365 (580)
T ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcc
Confidence 344556688 5667899888888888888 8864
No 249
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=64.79 E-value=3.8 Score=40.38 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=14.2
Q ss_pred eEEEEecCCccccCCC
Q 042288 29 DTVVADVDGTLLRGRS 44 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds 44 (515)
++++||+||||+.++.
T Consensus 2 k~i~~D~DGtl~~~~~ 17 (257)
T TIGR01458 2 KGVLLDISGVLYISDA 17 (257)
T ss_pred CEEEEeCCCeEEeCCC
Confidence 5799999999999765
No 250
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=64.14 E-value=4 Score=39.82 Aligned_cols=16 Identities=38% Similarity=0.355 Sum_probs=13.6
Q ss_pred CCeEEEEecCCccccC
Q 042288 27 EKDTVVADVDGTLLRG 42 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ 42 (515)
..++.+||+||||.+.
T Consensus 2 ~~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEI 17 (244)
T ss_pred CcEEEEEecCccccCC
Confidence 4578999999999973
No 251
>KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism]
Probab=62.98 E-value=8.5 Score=34.97 Aligned_cols=109 Identities=20% Similarity=0.289 Sum_probs=66.1
Q ss_pred EEEcCCCCCCCCCCCCCCcEEEEeCCCCC-CcHHHHHHh--cC--CCccEEEec----ccchhhhhhcCCeeEEecCChh
Q 042288 294 VYIKGTPPPPAQKSSGQTGVLFICSHRTL-LDPIFLSTA--LG--RPIPAVTYS----LSRLSELISPIKTVRLTRDRAT 364 (515)
Q Consensus 294 v~v~G~e~~p~~~~~~~~~~IiVaNH~S~-lD~~~l~~~--~~--~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~ 364 (515)
++|.|.||.| .++|.++|--|-.. +|...+.+- +. +-+..+..+ +|-+|.+- ..+.+ ++.
T Consensus 32 yeviglenvp-----qegpalivyyhgaipidmyylnsrmllqrerliytigdrflfklpgwgtis---eafhv---spg 100 (279)
T KOG4321|consen 32 YEVIGLENVP-----QEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKLPGWGTIS---EAFHV---SPG 100 (279)
T ss_pred eeEeecccCC-----CcCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEeCCCccchh---hhhcc---CCc
Confidence 5689999999 78999999988653 455544332 11 122333332 33333322 12222 233
Q ss_pred hHHHHHHHHHcC-CeEEecCCeeeCC--Cc----cccccchh----hccCCcEEEEEEEc
Q 042288 365 DASMIEKLLEKG-DLVICPEGTTCRE--PF----LLRFSALF----AELTDEVVPVAMSN 413 (515)
Q Consensus 365 ~~~~~~~~l~~G-~l~IFPEGTrs~~--~~----l~~Fk~Gf----~~~~~pVvPV~i~~ 413 (515)
..+.+...|++| -+.|-|-|.-... .. +.+=+-|| .++..||+|.--.+
T Consensus 101 tvqscvsilrdgnllaispggvyeaqfgdhyyellwrnrvgfakvaieakapiipcftqn 160 (279)
T KOG4321|consen 101 TVQSCVSILRDGNLLAISPGGVYEAQFGDHYYELLWRNRVGFAKVAIEAKAPIIPCFTQN 160 (279)
T ss_pred cHHHHHHhhccCcEEEEcCCceeeeccchHHHHHHHhccccceeeeeecCCCccchhHHH
Confidence 467788899999 5679998887632 21 33334555 66789999977665
No 252
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=62.55 E-value=3.8 Score=40.87 Aligned_cols=19 Identities=26% Similarity=0.410 Sum_probs=15.4
Q ss_pred CeEEEEecCCccccCCCch
Q 042288 28 KDTVVADVDGTLLRGRSSF 46 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds~~ 46 (515)
.++++||+||||+.++..+
T Consensus 2 ~~~~~~D~DGtl~~~~~~~ 20 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGERVV 20 (279)
T ss_pred ccEEEEeCCCceEcCCeeC
Confidence 3589999999999987543
No 253
>PLN02645 phosphoglycolate phosphatase
Probab=62.33 E-value=4 Score=41.46 Aligned_cols=19 Identities=26% Similarity=0.522 Sum_probs=16.0
Q ss_pred CCeEEEEecCCccccCCCc
Q 042288 27 EKDTVVADVDGTLLRGRSS 45 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~ 45 (515)
..++++||+||||+.++..
T Consensus 27 ~~~~~~~D~DGtl~~~~~~ 45 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKL 45 (311)
T ss_pred hCCEEEEeCcCCeEeCCcc
Confidence 3579999999999998753
No 254
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=62.05 E-value=4.3 Score=36.53 Aligned_cols=22 Identities=18% Similarity=0.225 Sum_probs=16.3
Q ss_pred CEEEEecCcHHHHHHHHHhhcCC
Q 042288 130 RRCVLTANPRIMVEAFLKDFLGA 152 (515)
Q Consensus 130 ~~vivSaS~~~~v~~ia~~~lGi 152 (515)
.++|.|++.+.+++++.+. +.-
T Consensus 53 ev~i~T~~~~~ya~~v~~~-ldp 74 (159)
T PF03031_consen 53 EVVIWTSASEEYAEPVLDA-LDP 74 (159)
T ss_dssp EEEEE-SS-HHHHHHHHHH-HTT
T ss_pred eEEEEEeehhhhhhHHHHh-hhh
Confidence 4567899999999999997 653
No 255
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=60.55 E-value=5 Score=40.93 Aligned_cols=17 Identities=35% Similarity=0.733 Sum_probs=14.2
Q ss_pred EEEEecCCccccCCCch
Q 042288 30 TVVADVDGTLLRGRSSF 46 (515)
Q Consensus 30 lavFD~DgTL~~~ds~~ 46 (515)
.++||+||||++++..+
T Consensus 2 ~~ifD~DGvL~~g~~~i 18 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPI 18 (321)
T ss_pred EEEEeCcCceECCcccc
Confidence 47999999999987653
No 256
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=59.77 E-value=35 Score=33.28 Aligned_cols=65 Identities=22% Similarity=0.289 Sum_probs=42.7
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-EEeceEEEeCceee---eEEecCCccccccHHHHHHHHhcC
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-VIGTEICVYKGRST---GFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-vigt~l~~~~G~~t---G~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
+++.++++| +++++||-+-..+.++.+. ||++. ++|. ||.+. |++..... ...+-++.+-+++..
T Consensus 28 al~~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~~~I~~-----NGa~i~~~~~~i~~~~-l~~~~~~~i~~~~~~ 97 (264)
T COG0561 28 ALARLREKGVKVVLATGRPLPDVLSILEE-LGLDGPLITF-----NGALIYNGGELLFQKP-LSREDVEELLELLED 97 (264)
T ss_pred HHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCccEEEe-----CCeEEecCCcEEeeec-CCHHHHHHHHHHHHh
Confidence 344566789 5677999999999999999 99983 4443 33222 44443333 455666777776644
No 257
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=58.18 E-value=6.6 Score=35.81 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=14.5
Q ss_pred CeEEEEecCCccccCCC
Q 042288 28 KDTVVADVDGTLLRGRS 44 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds 44 (515)
+++++||.||||+...+
T Consensus 1 ~~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPP 17 (161)
T ss_pred CCEEEEeCCCCccccCC
Confidence 47899999999999554
No 258
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=57.34 E-value=6.1 Score=36.45 Aligned_cols=15 Identities=20% Similarity=0.304 Sum_probs=13.1
Q ss_pred CeEEEEecCCccccC
Q 042288 28 KDTVVADVDGTLLRG 42 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ 42 (515)
.++++||.||||+..
T Consensus 3 ~~~~~~d~~~t~~~~ 17 (181)
T PRK08942 3 MKAIFLDRDGVINVD 17 (181)
T ss_pred ccEEEEECCCCcccC
Confidence 589999999999774
No 259
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=57.11 E-value=5.5 Score=39.57 Aligned_cols=23 Identities=35% Similarity=0.570 Sum_probs=19.1
Q ss_pred CCeEEEEecCCccccCCCchHHH
Q 042288 27 EKDTVVADVDGTLLRGRSSFPYF 49 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~~~ 49 (515)
....++||+||||+.|++.++--
T Consensus 7 ~y~~~l~DlDGvl~~G~~~ipga 29 (269)
T COG0647 7 KYDGFLFDLDGVLYRGNEAIPGA 29 (269)
T ss_pred hcCEEEEcCcCceEeCCccCchH
Confidence 45679999999999999876654
No 260
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=57.02 E-value=43 Score=30.76 Aligned_cols=76 Identities=25% Similarity=0.307 Sum_probs=48.5
Q ss_pred CCCcHHHHHHHH---hCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHh
Q 042288 115 GDLHPETWRVFS---SCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKML 190 (515)
Q Consensus 115 ~~~~~~~~~~l~---~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~ 190 (515)
+...|++.+|+. ++| .++|+|-..+.=|+.+++. ||++.+.... .| .+.+=.++++++-
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~fi~~A~-------------KP---~~~~fr~Al~~m~ 107 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVPFIYRAK-------------KP---FGRAFRRALKEMN 107 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCceeeccc-------------Cc---cHHHHHHHHHHcC
Confidence 346678887654 688 5667888899999999998 9999655433 11 2222223444432
Q ss_pred cCCCCCceEEEeCC-cCcHH
Q 042288 191 GDDEEMPDIGLGDR-KTDSL 209 (515)
Q Consensus 191 ~~~~~~~~~aygDS-~~Dlp 209 (515)
-. ...++-+||. .+|+-
T Consensus 108 l~--~~~vvmVGDqL~TDVl 125 (175)
T COG2179 108 LP--PEEVVMVGDQLFTDVL 125 (175)
T ss_pred CC--hhHEEEEcchhhhhhh
Confidence 11 3457789998 47764
No 261
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=56.78 E-value=4.6 Score=38.97 Aligned_cols=12 Identities=42% Similarity=0.739 Sum_probs=10.7
Q ss_pred EEEEecCCcccc
Q 042288 30 TVVADVDGTLLR 41 (515)
Q Consensus 30 lavFD~DgTL~~ 41 (515)
++++|+||||++
T Consensus 1 li~~DlDgTLl~ 12 (236)
T TIGR02471 1 LIITDLDNTLLG 12 (236)
T ss_pred CeEEeccccccC
Confidence 478999999997
No 262
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=56.59 E-value=6.2 Score=39.14 Aligned_cols=61 Identities=20% Similarity=0.110 Sum_probs=39.5
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCC--ceEEEeCCcCcHHHHhcccc--ceeeCCCC
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEM--PDIGLGDRKTDSLFLNLCKE--SYMVPPNP 224 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~--~~~aygDS~~DlpmL~~a~~--~~~Vnp~~ 224 (515)
+++..|+..=++.. .+..|..+++...+..+.. ..++.||..+|-.+++.+.+ +.-|.+-.
T Consensus 165 ~~v~~gk~vVEvrp----~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~ 229 (266)
T COG1877 165 LRVTPGKMVVELRP----PGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGV 229 (266)
T ss_pred EEEEeCceEEEEee----CCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecC
Confidence 55555554444443 3445888888776653222 35678999999999999986 55555443
No 263
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=56.13 E-value=6.2 Score=41.31 Aligned_cols=18 Identities=39% Similarity=0.721 Sum_probs=15.5
Q ss_pred CCeEEEEecCCccccCCC
Q 042288 27 EKDTVVADVDGTLLRGRS 44 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds 44 (515)
..+++++|+||||+.+|-
T Consensus 374 n~kiVVsDiDGTITkSD~ 391 (580)
T COG5083 374 NKKIVVSDIDGTITKSDA 391 (580)
T ss_pred CCcEEEEecCCcEEehhh
Confidence 358999999999999764
No 264
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=55.52 E-value=31 Score=33.77 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=25.3
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
+++.++++| +++++||=+...+.+++++ +|++
T Consensus 28 ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~ 60 (270)
T PRK10513 28 AIAAARAKGVNVVLTTGRPYAGVHRYLKE-LHME 60 (270)
T ss_pred HHHHHHHCCCEEEEecCCChHHHHHHHHH-hCCC
Confidence 444567789 5567899999999999998 9975
No 265
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=55.30 E-value=6.5 Score=36.12 Aligned_cols=14 Identities=29% Similarity=0.408 Sum_probs=12.3
Q ss_pred eEEEEecCCccccC
Q 042288 29 DTVVADVDGTLLRG 42 (515)
Q Consensus 29 ~lavFD~DgTL~~~ 42 (515)
++++||.||||+.+
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (176)
T TIGR00213 2 KAIFLDRDGTINID 15 (176)
T ss_pred CEEEEeCCCCEeCC
Confidence 68999999999963
No 266
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=54.49 E-value=5.2 Score=38.85 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=13.4
Q ss_pred EEEecCCccccCCCch
Q 042288 31 VVADVDGTLLRGRSSF 46 (515)
Q Consensus 31 avFD~DgTL~~~ds~~ 46 (515)
++||+||||++++..+
T Consensus 1 ~lfD~DGvL~~~~~~~ 16 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPI 16 (236)
T ss_pred CEEeCcCccCcCCccC
Confidence 4799999999987643
No 267
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=54.08 E-value=44 Score=32.61 Aligned_cols=69 Identities=16% Similarity=0.223 Sum_probs=39.4
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-EEeceEEE-eCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-VIGTEICV-YKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-vigt~l~~-~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
+++.++++| +++++||=+...+.++++. +|++. +||..-.+ .+ .-+|++....+ ...+-+..+-+.+.+
T Consensus 28 ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~d-~~~~~~l~~~~-l~~~~~~~i~~~~~~ 99 (272)
T PRK10530 28 ALARAREAGYKVIIVTGRHHVAIHPFYQA-LALDTPAICCNGTYLYD-YQAKKVLEADP-LPVQQALQVIEMLDE 99 (272)
T ss_pred HHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCCEEEcCCcEEEe-cCCCEEEEecC-CCHHHHHHHHHHHHh
Confidence 344566689 5567899998889999998 99872 44433211 10 00234333333 344455566666654
No 268
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=53.65 E-value=19 Score=33.98 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=28.4
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-EEEe
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-MVIG 157 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~vig 157 (515)
++++.++++| +++++||-+...++++++. |+++ .+++
T Consensus 25 ~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l~~~~~~i~ 63 (215)
T TIGR01487 25 EAIRKAEKKGIPVSLVTGNTVPFARALAVL-IGTSGPVVA 63 (215)
T ss_pred HHHHHHHHCCCEEEEEcCCcchhHHHHHHH-hCCCCcEEE
Confidence 3445567789 5677999999999999998 9987 4554
No 269
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=52.47 E-value=41 Score=36.06 Aligned_cols=88 Identities=25% Similarity=0.273 Sum_probs=48.9
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC------------cEEEec-----------eE-EEe--Ccee-----
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA------------DMVIGT-----------EI-CVY--KGRS----- 167 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi------------d~vigt-----------~l-~~~--~G~~----- 167 (515)
..++.+|++| .+.++|.|+-.++..++...+|- |-||.. .+ +++ .|.+
T Consensus 190 ~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l~~~~~ 269 (448)
T PF05761_consen 190 PWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKLKWGKY 269 (448)
T ss_dssp HHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSEECS--
T ss_pred HHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCccccccc
Confidence 3455677899 66789999999999999864554 444422 11 222 2322
Q ss_pred eeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCC-cCcHH
Q 042288 168 TGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDR-KTDSL 209 (515)
Q Consensus 168 tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS-~~Dlp 209 (515)
++.+....+ +..|=+..+.++++..+ ..+.++||+ .+|+-
T Consensus 270 ~~~l~~g~v-Y~gGn~~~l~~ll~~~g-~~VLY~GDhi~~Di~ 310 (448)
T PF05761_consen 270 VGPLEKGKV-YSGGNWDQLHKLLGWRG-KEVLYFGDHIYGDIL 310 (448)
T ss_dssp -SS--TC-E-EEE--HHHHHHHCT--G-GGEEEEESSTTTTHH
T ss_pred cccccCCCE-eecCCHHHHHHHHccCC-CeEEEECCchhhhhh
Confidence 223333333 56666778888887642 346678999 58874
No 270
>PLN03017 trehalose-phosphatase
Probab=52.45 E-value=8.3 Score=40.02 Aligned_cols=15 Identities=33% Similarity=0.397 Sum_probs=0.0
Q ss_pred CCeEEEEecCCcccc
Q 042288 27 EKDTVVADVDGTLLR 41 (515)
Q Consensus 27 ~~~lavFD~DgTL~~ 41 (515)
...++++|+||||++
T Consensus 110 k~~llflD~DGTL~P 124 (366)
T PLN03017 110 KQIVMFLDYDGTLSP 124 (366)
T ss_pred CCeEEEEecCCcCcC
No 271
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=51.11 E-value=27 Score=33.05 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=25.3
Q ss_pred HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 122 WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 122 ~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
++.++++| .++++||-+...++++++. +|++
T Consensus 25 l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 25 LTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 34456689 6677999999999999998 9976
No 272
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=50.90 E-value=44 Score=33.93 Aligned_cols=84 Identities=8% Similarity=-0.023 Sum_probs=51.9
Q ss_pred HHHHHHHHhCC-CEEEEecCcHHHHHHHHHhh---cCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCC
Q 042288 119 PETWRVFSSCG-RRCVLTANPRIMVEAFLKDF---LGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE 194 (515)
Q Consensus 119 ~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~---lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~ 194 (515)
.++++.++++| ...|+|.+....+..+.+.| +|+...+. . .... + .-|.+.+++.+.+.+
T Consensus 37 ~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~----~-------~~~~----~-~pk~~~i~~~~~~l~ 100 (320)
T TIGR01686 37 QEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD----A-------RSIN----W-GPKSESLRKIAKKLN 100 (320)
T ss_pred HHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee----E-------EEEe----c-CchHHHHHHHHHHhC
Confidence 35566778899 56789999988888887741 23321111 0 0000 1 236677766655432
Q ss_pred --CCceEEEeCCcCcHHHHhccccce
Q 042288 195 --EMPDIGLGDRKTDSLFLNLCKESY 218 (515)
Q Consensus 195 --~~~~~aygDS~~DlpmL~~a~~~~ 218 (515)
...++++|||..|+..-+.+.--+
T Consensus 101 i~~~~~vfidD~~~d~~~~~~~lp~~ 126 (320)
T TIGR01686 101 LGTDSFLFIDDNPAERANVKITLPVK 126 (320)
T ss_pred CCcCcEEEECCCHHHHHHHHHHCCCC
Confidence 244788999999999888755333
No 273
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=50.83 E-value=55 Score=29.77 Aligned_cols=15 Identities=40% Similarity=0.729 Sum_probs=13.2
Q ss_pred EEEEecCCccccCCC
Q 042288 30 TVVADVDGTLLRGRS 44 (515)
Q Consensus 30 lavFD~DgTL~~~ds 44 (515)
++++|.|||||.+|.
T Consensus 1 VVvsDIDGTiT~SD~ 15 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV 15 (157)
T ss_pred CEEEeccCCcCccch
Confidence 589999999999874
No 274
>PLN02580 trehalose-phosphatase
Probab=50.66 E-value=9 Score=40.07 Aligned_cols=15 Identities=40% Similarity=0.452 Sum_probs=12.5
Q ss_pred CCeEEEEecCCcccc
Q 042288 27 EKDTVVADVDGTLLR 41 (515)
Q Consensus 27 ~~~lavFD~DgTL~~ 41 (515)
...+.++|+||||.+
T Consensus 118 k~~~LfLDyDGTLaP 132 (384)
T PLN02580 118 KKIALFLDYDGTLSP 132 (384)
T ss_pred CCeEEEEecCCccCC
Confidence 356788899999987
No 275
>COG4996 Predicted phosphatase [General function prediction only]
Probab=50.46 E-value=8.4 Score=33.76 Aligned_cols=16 Identities=31% Similarity=0.387 Sum_probs=13.1
Q ss_pred eEEEEecCCccccCCC
Q 042288 29 DTVVADVDGTLLRGRS 44 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds 44 (515)
++++||.||||++-..
T Consensus 1 ~~i~~d~d~t~wdhh~ 16 (164)
T COG4996 1 RAIVFDADKTLWDHHN 16 (164)
T ss_pred CcEEEeCCCccccccc
Confidence 4689999999999543
No 276
>PLN02151 trehalose-phosphatase
Probab=49.88 E-value=9.6 Score=39.41 Aligned_cols=59 Identities=20% Similarity=0.196 Sum_probs=38.8
Q ss_pred EEEeCceeeeEEecCCccccccHHHHHHHHhcCCC---C--CceEEEeCCcCcHHHHhcc-----ccceeeC
Q 042288 160 ICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDE---E--MPDIGLGDRKTDSLFLNLC-----KESYMVP 221 (515)
Q Consensus 160 l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~---~--~~~~aygDS~~DlpmL~~a-----~~~~~Vn 221 (515)
+.+..|+..=++... .+-.|-.+++.++...+ . ...++.||-.+|-.+++.. +.++.|+
T Consensus 251 l~v~~GkkVvEvrP~---~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg 319 (354)
T PLN02151 251 LMLTQGRKVLEIRPI---IKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS 319 (354)
T ss_pred cEEecCCEEEEEeCC---CCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec
Confidence 555667766666532 35568788887765421 1 1257789999999999965 3446666
No 277
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=47.39 E-value=11 Score=38.33 Aligned_cols=17 Identities=35% Similarity=0.460 Sum_probs=14.9
Q ss_pred CCeEEEEecCCccccCC
Q 042288 27 EKDTVVADVDGTLLRGR 43 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~d 43 (515)
..+++++|+|+||+.|.
T Consensus 2 ~~k~~v~DlDnTlw~gv 18 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGV 18 (320)
T ss_pred CeEEEEEcCCCCCCCCE
Confidence 46899999999999983
No 278
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=46.88 E-value=39 Score=39.42 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=28.6
Q ss_pred ccccHHHHHHHHhcC---CC--CCceEEEeCCcCcHHHHhccc
Q 042288 178 VGKNKAGALMKMLGD---DE--EMPDIGLGDRKTDSLFLNLCK 215 (515)
Q Consensus 178 ~g~~K~~~l~~~~~~---~~--~~~~~aygDS~~DlpmL~~a~ 215 (515)
.|-.|-.+++.++.. .+ ....+++||+.||.+||+.++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 466788888887531 11 234789999999999999886
No 279
>PRK10976 putative hydrolase; Provisional
Probab=46.40 E-value=78 Score=30.84 Aligned_cols=67 Identities=13% Similarity=0.165 Sum_probs=39.3
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-EEEeceEEE-eCceeeeEEecCCccccccHHHHHHHHhc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-MVIGTEICV-YKGRSTGFVKSPGVLVGKNKAGALMKMLG 191 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~vigt~l~~-~~G~~tG~i~~~~~~~g~~K~~~l~~~~~ 191 (515)
+++.++++| +++++||=+...++++.+. +|++ .+||..-.+ .+ .+|++....+ ...+-+..+-+.+.
T Consensus 27 ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~~--~~~~~i~~~~-l~~~~~~~i~~~~~ 96 (266)
T PRK10976 27 TLKLLTARGIHFVFATGRHHVDVGQIRDN-LEIKSYMITSNGARVHD--TDGNLIFSHN-LDRDIASDLFGVVH 96 (266)
T ss_pred HHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCeEEEcCCcEEEC--CCCCEehhhc-CCHHHHHHHHHhhc
Confidence 344566789 5567899988889999998 9987 445443221 11 1233332233 34455556655554
No 280
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=46.20 E-value=12 Score=36.40 Aligned_cols=26 Identities=8% Similarity=-0.143 Sum_probs=16.9
Q ss_pred HhCC-CEEEEecCcHHHHHHHHHhhcCC
Q 042288 126 SSCG-RRCVLTANPRIMVEAFLKDFLGA 152 (515)
Q Consensus 126 ~~~G-~~vivSaS~~~~v~~ia~~~lGi 152 (515)
+++| ..+++||-+..-++++.++ ++.
T Consensus 34 ~~~gi~fv~aTGR~~~~~~~~~~~-~~~ 60 (249)
T TIGR01485 34 RGEDSLLVYSTGRSPHSYKELQKQ-KPL 60 (249)
T ss_pred hccCceEEEEcCCCHHHHHHHHhc-CCC
Confidence 3456 4556777777777777776 664
No 281
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=45.88 E-value=42 Score=33.82 Aligned_cols=20 Identities=30% Similarity=0.385 Sum_probs=14.3
Q ss_pred cCCCCCeEEEEecCCccccC
Q 042288 23 SIGREKDTVVADVDGTLLRG 42 (515)
Q Consensus 23 ~~~~~~~lavFD~DgTL~~~ 42 (515)
..-.-+++++||+||||+..
T Consensus 121 ~~~~~~kvIvFDLDgTLi~~ 140 (301)
T TIGR01684 121 KVFEPPHVVVFDLDSTLITD 140 (301)
T ss_pred cccccceEEEEecCCCCcCC
Confidence 33345678888888888884
No 282
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=45.84 E-value=15 Score=36.64 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=15.6
Q ss_pred CCCCeEEEEecCCccccCC
Q 042288 25 GREKDTVVADVDGTLLRGR 43 (515)
Q Consensus 25 ~~~~~lavFD~DgTL~~~d 43 (515)
-+-+.+++||+|.||+..+
T Consensus 119 ~~~phVIVfDlD~TLItd~ 137 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDE 137 (297)
T ss_pred CCCCcEEEEECCCcccccC
Confidence 3457899999999999843
No 283
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=45.53 E-value=17 Score=34.25 Aligned_cols=22 Identities=18% Similarity=0.283 Sum_probs=18.0
Q ss_pred CEEEEecCcHHHHHHHHHhhcCC
Q 042288 130 RRCVLTANPRIMVEAFLKDFLGA 152 (515)
Q Consensus 130 ~~vivSaS~~~~v~~ia~~~lGi 152 (515)
.++|=|||...|++++..+ +|+
T Consensus 62 eIvVwTAa~~~ya~~~l~~-l~~ 83 (195)
T TIGR02245 62 DIVIWSATSMKWIEIKMTE-LGV 83 (195)
T ss_pred EEEEEecCCHHHHHHHHHH-hcc
Confidence 4555699999999999998 875
No 284
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=45.48 E-value=12 Score=43.44 Aligned_cols=17 Identities=29% Similarity=0.505 Sum_probs=14.5
Q ss_pred CCeEEEEecCCccccCC
Q 042288 27 EKDTVVADVDGTLLRGR 43 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~d 43 (515)
..+++++|+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 46899999999999743
No 285
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=45.13 E-value=15 Score=33.23 Aligned_cols=39 Identities=26% Similarity=0.169 Sum_probs=27.1
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcE-EEeceE
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGADM-VIGTEI 160 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~-vigt~l 160 (515)
++++.++ ++ ..+|+|++.+.+++++++. ++.+. .++.++
T Consensus 65 efL~~l~-~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri 105 (156)
T TIGR02250 65 EFLKEAS-KLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRI 105 (156)
T ss_pred HHHHHHH-hhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEE
Confidence 3344444 44 4567899999999999998 88773 444444
No 286
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=44.77 E-value=37 Score=30.79 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCc
Q 042288 120 ETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 120 ~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid 153 (515)
++++.+.+.=.++|.|++.+.+++++.+. ++.+
T Consensus 49 eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~ 81 (162)
T TIGR02251 49 EFLERVSKWYELVIFTASLEEYADPVLDI-LDRG 81 (162)
T ss_pred HHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcC
Confidence 44445554413466899999999999997 8865
No 287
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=43.81 E-value=13 Score=35.00 Aligned_cols=17 Identities=41% Similarity=0.518 Sum_probs=14.3
Q ss_pred CeEEEEecCCccccCCC
Q 042288 28 KDTVVADVDGTLLRGRS 44 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds 44 (515)
..++.||+||||+....
T Consensus 11 ~~l~lfdvdgtLt~~r~ 27 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQ 27 (252)
T ss_pred ceEEEEecCCccccccc
Confidence 46999999999998653
No 288
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=43.79 E-value=39 Score=32.85 Aligned_cols=68 Identities=18% Similarity=0.227 Sum_probs=41.7
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-EEEeceEEE-eCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-MVIGTEICV-YKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~vigt~l~~-~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
+++.++++| +.+++||-+...+.++.++ +|++ .+||..-.+ .+. .|++....+ ...+.++.+-+.+.+
T Consensus 24 ~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~~~~I~~NGa~i~~~--~~~~i~~~~-i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 24 ALAKLREKGIKVVLATGRPYKEVKNILKE-LGLDTPFITANGAAVIDD--QGEILYKKP-LDLDLVEEILNFLKK 94 (256)
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCCCCEEEcCCcEEECC--CCCEEeecC-CCHHHHHHHHHHHHH
Confidence 344566689 5677999999999999998 9987 555433221 110 123222223 455667777777655
No 289
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=43.74 E-value=35 Score=33.63 Aligned_cols=32 Identities=6% Similarity=0.032 Sum_probs=25.8
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
+++.++++| +.+++||=+...+++++++ +|++
T Consensus 32 ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~ 64 (271)
T PRK03669 32 WLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQ 64 (271)
T ss_pred HHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCC
Confidence 344566689 5677999999999999998 9985
No 290
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=42.68 E-value=15 Score=33.38 Aligned_cols=16 Identities=38% Similarity=0.495 Sum_probs=13.5
Q ss_pred eEEEEecCCccccCCC
Q 042288 29 DTVVADVDGTLLRGRS 44 (515)
Q Consensus 29 ~lavFD~DgTL~~~ds 44 (515)
..+|+|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 5789999999999643
No 291
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=42.51 E-value=46 Score=33.57 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=12.0
Q ss_pred CCCeEEEEecCCccccC
Q 042288 26 REKDTVVADVDGTLLRG 42 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ 42 (515)
+-+++++||+||||+..
T Consensus 126 ~~~~~i~~D~D~TL~~~ 142 (303)
T PHA03398 126 EIPHVIVFDLDSTLITD 142 (303)
T ss_pred eeccEEEEecCCCccCC
Confidence 34577777777777774
No 292
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=42.14 E-value=14 Score=42.26 Aligned_cols=17 Identities=29% Similarity=0.397 Sum_probs=14.7
Q ss_pred CCCeEEEEecCCccccC
Q 042288 26 REKDTVVADVDGTLLRG 42 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ 42 (515)
...++++||+||||++.
T Consensus 490 ~~~rLi~~D~DGTL~~~ 506 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPF 506 (726)
T ss_pred ccceEEEEecCccccCC
Confidence 35799999999999984
No 293
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=41.23 E-value=23 Score=42.22 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=36.2
Q ss_pred cHHHHHHHHhcCCCCCceEEEeCCcCcHHHHhccccceeeCCCCCCCccc
Q 042288 181 NKAGALMKMLGDDEEMPDIGLGDRKTDSLFLNLCKESYMVPPNPKVDPVS 230 (515)
Q Consensus 181 ~K~~~l~~~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A 230 (515)
+|+..++..-.. -.....|.||+.||++|++.|+-.+-|.-.+.+++..
T Consensus 781 QKA~Vv~lVk~~-~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvm 829 (1151)
T KOG0206|consen 781 QKALVVKLVKKG-LKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVM 829 (1151)
T ss_pred HHHHHHHHHHhc-CCceEEEeeCCCccchheeeCCcCeeeccchhhhhhh
Confidence 455544444211 1345799999999999999999999999988887643
No 294
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=40.42 E-value=18 Score=32.20 Aligned_cols=16 Identities=44% Similarity=0.619 Sum_probs=13.8
Q ss_pred CeEEEEecCCccccCC
Q 042288 28 KDTVVADVDGTLLRGR 43 (515)
Q Consensus 28 ~~lavFD~DgTL~~~d 43 (515)
+.++++|+||||+++.
T Consensus 2 k~~lvldld~tl~~~~ 17 (148)
T smart00577 2 KKTLVLDLDETLVHST 17 (148)
T ss_pred CcEEEEeCCCCeECCC
Confidence 4678999999999974
No 295
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=40.18 E-value=52 Score=27.47 Aligned_cols=73 Identities=21% Similarity=0.238 Sum_probs=43.0
Q ss_pred EEecCcHHHHHHHHHhhc---CCcEEEeceEEEe--CceeeeEEecCCccccccHHHHHHHHhcCCCCCceEEEeCC-cC
Q 042288 133 VLTANPRIMVEAFLKDFL---GADMVIGTEICVY--KGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMPDIGLGDR-KT 206 (515)
Q Consensus 133 ivSaS~~~~v~~ia~~~l---Gid~vigt~l~~~--~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~~~aygDS-~~ 206 (515)
-||+||-.+-..+.+- + |+. -|+ +..+ ++.+++.+... .++.|...|++.+..-.....+-+||| ..
T Consensus 4 YvS~SPwnly~~l~~F-l~~~~~P--~G~-~~Lr~~~~~~~~~~~~~---~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~ 76 (100)
T PF09949_consen 4 YVSNSPWNLYPFLRDF-LRRNGFP--AGP-LLLRDYGPSLSGLFKSG---AEEHKRDNIERILRDFPERKFILIGDSGQH 76 (100)
T ss_pred EEcCCHHHHHHHHHHH-HHhcCCC--CCc-eEcccCCccccccccCC---chhHHHHHHHHHHHHCCCCcEEEEeeCCCc
Confidence 4899987776665552 3 443 122 2222 33444555432 235899998888776333445778998 67
Q ss_pred cHHHHh
Q 042288 207 DSLFLN 212 (515)
Q Consensus 207 DlpmL~ 212 (515)
|.++=.
T Consensus 77 DpeiY~ 82 (100)
T PF09949_consen 77 DPEIYA 82 (100)
T ss_pred CHHHHH
Confidence 866544
No 296
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=39.66 E-value=21 Score=32.89 Aligned_cols=20 Identities=20% Similarity=0.195 Sum_probs=16.1
Q ss_pred CCCCeEEEEecCCccccCCC
Q 042288 25 GREKDTVVADVDGTLLRGRS 44 (515)
Q Consensus 25 ~~~~~lavFD~DgTL~~~ds 44 (515)
...-+.++||+|.||+.-++
T Consensus 38 ~~Gik~li~DkDNTL~~~~~ 57 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPPYE 57 (168)
T ss_pred hcCceEEEEcCCCCCCCCCc
Confidence 34568999999999998554
No 297
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=36.24 E-value=58 Score=31.95 Aligned_cols=36 Identities=17% Similarity=0.137 Sum_probs=27.1
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-EEEe
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-MVIG 157 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~vig 157 (515)
+++.++++| +++++||=+...+++++++ +|++ .++|
T Consensus 27 ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~ 64 (272)
T PRK15126 27 TLARLRERDITLTFATGRHVLEMQHILGA-LSLDAYLIT 64 (272)
T ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCcEEe
Confidence 344566689 5567899999999999998 9986 3444
No 298
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=35.64 E-value=26 Score=36.40 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=47.9
Q ss_pred CcEEEEeCCCCCCcHHHHHHhcCCCccEEEec----ccchhhhhhcCCeeEEecCChh---h-HHHHHHHHHcC-CeEEe
Q 042288 311 TGVLFICSHRTLLDPIFLSTALGRPIPAVTYS----LSRLSELISPIKTVRLTRDRAT---D-ASMIEKLLEKG-DLVIC 381 (515)
Q Consensus 311 ~~~IiVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~g~~~~~~~~i~idR~~~~---~-~~~~~~~l~~G-~l~IF 381 (515)
.|+-+++|-+|+. +-+.. .+..+..+... --+.......-|-+.++++-.. . +....+.|..| +|++
T Consensus 250 dp~n~i~~~t~~~--~~~~~-~~eiV~~vgfp~sGks~f~a~~~~~~~y~~vn~d~lg~~~~C~~~~~e~l~~~~sVvi- 325 (422)
T KOG2134|consen 250 DPKNVISRATSLC--LKLDG-HGEIVVAVGFPGSGKSTFAAKRVVPNGYKIVNADTLGTPQNCLLANAEALKHGKSVVI- 325 (422)
T ss_pred CchhHHhhhcchh--cccCC-CCcEEEEEecCCCCcchhhhhhcccCceeEeecccCCCchhhHHHHHHHhhcccEEee-
Confidence 4777888888877 11111 01001222211 1112222334456667765432 2 56778889999 8888
Q ss_pred cCCeeeCCCccccccch-hhccCCcEEEEEEEcC
Q 042288 382 PEGTTCREPFLLRFSAL-FAELTDEVVPVAMSNR 414 (515)
Q Consensus 382 PEGTrs~~~~l~~Fk~G-f~~~~~pVvPV~i~~~ 414 (515)
.-|+- +..-.....+ .-+.++|+--..+..+
T Consensus 326 -dnt~p-d~~sr~~~~~~a~e~~~p~rcf~~~~s 357 (422)
T KOG2134|consen 326 -DNTNP-DAESRKYYLDCATEREIPIRCFEMNSS 357 (422)
T ss_pred -CCCCc-chHHHHHHhhhHHHhCccceeeeeccH
Confidence 21221 1111222223 3556777776666654
No 299
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=35.10 E-value=22 Score=34.38 Aligned_cols=82 Identities=16% Similarity=0.033 Sum_probs=38.7
Q ss_pred HHHHHHHhCC-CEEEEecCcHHHHH---HHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCC
Q 042288 120 ETWRVFSSCG-RRCVLTANPRIMVE---AFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEE 195 (515)
Q Consensus 120 ~~~~~l~~~G-~~vivSaS~~~~v~---~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~ 195 (515)
+.++.++++| .+++||+=++..-+ .-.+. .|+... ..+-.. +.-...++...+-|..+.++.... +.
T Consensus 122 ~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~--~~l~lr-----~~~~~~~~~~~~yK~~~r~~i~~~-Gy 192 (229)
T PF03767_consen 122 ELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGW--DHLILR-----PDKDPSKKSAVEYKSERRKEIEKK-GY 192 (229)
T ss_dssp HHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTB--SCGEEE-----EESSTSS------SHHHHHHHHHT-TE
T ss_pred HHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCcc--chhccc-----cccccccccccccchHHHHHHHHc-CC
Confidence 3444677899 66679876544322 33344 576311 111111 000000111123355555554433 22
Q ss_pred CceEEEeCCcCcHHH
Q 042288 196 MPDIGLGDRKTDSLF 210 (515)
Q Consensus 196 ~~~~aygDS~~Dlpm 210 (515)
.+...+||+.+|+.=
T Consensus 193 ~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 193 RIIANIGDQLSDFSG 207 (229)
T ss_dssp EEEEEEESSGGGCHC
T ss_pred cEEEEeCCCHHHhhc
Confidence 345668999999876
No 300
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=34.68 E-value=57 Score=25.61 Aligned_cols=25 Identities=24% Similarity=0.460 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHcC-CeEEecCCeee
Q 042288 363 ATDASMIEKLLEKG-DLVICPEGTTC 387 (515)
Q Consensus 363 ~~~~~~~~~~l~~G-~l~IFPEGTrs 387 (515)
.+.+.++.+.|++| ++.|-|.|-+.
T Consensus 46 ~~Alr~~~~~lk~G~~~~itpDGPrG 71 (74)
T PF04028_consen 46 ARALREMLRALKEGYSIAITPDGPRG 71 (74)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCC
Confidence 34588899999999 99999999764
No 301
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=34.27 E-value=49 Score=37.87 Aligned_cols=125 Identities=21% Similarity=0.255 Sum_probs=71.4
Q ss_pred CcHHHHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCC-c-EE-----EeceE----EEeCceeeeEEecCCccccccH--
Q 042288 117 LHPETWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGA-D-MV-----IGTEI----CVYKGRSTGFVKSPGVLVGKNK-- 182 (515)
Q Consensus 117 ~~~~~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-d-~v-----igt~l----~~~~G~~tG~i~~~~~~~g~~K-- 182 (515)
.-|+++...|+.| ++++||+--...++.+|+. -|| . .- ++-++ +..|.+-+.-. +.+|.++
T Consensus 594 ~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~-vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~----VihG~eL~~ 668 (1019)
T KOG0203|consen 594 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKS-VGIISEGSETVEDIAKRLNIPVEQVNSRDAKAA----VIHGSELPD 668 (1019)
T ss_pred cCchhhhhhhhhCceEEEEecCccchhhhhhhh-eeeecCCchhhhhhHHhcCCcccccCccccceE----EEecccccc
Confidence 4578888999999 5667999988899999998 774 1 00 11111 11233311000 0022222
Q ss_pred --HHHHHHHhcCCC---------------------CCceEE-EeCCcCcHHHHhccccceeeCC-CCCCCccccc----C
Q 042288 183 --AGALMKMLGDDE---------------------EMPDIG-LGDRKTDSLFLNLCKESYMVPP-NPKVDPVSQD----K 233 (515)
Q Consensus 183 --~~~l~~~~~~~~---------------------~~~~~a-ygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~~----~ 233 (515)
.+.|.+.+..+. .+.++| -||+.||-|-|+.|+-.++-.= .....+-|++ .
T Consensus 669 ~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLD 748 (1019)
T KOG0203|consen 669 MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLD 748 (1019)
T ss_pred cCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEec
Confidence 234555443310 111344 4999999999999999999853 3335554542 2
Q ss_pred CCC-ceE--EccCccc
Q 042288 234 LPK-PIV--FHDGRLV 246 (515)
Q Consensus 234 ~~W-~i~--f~~~r~~ 246 (515)
-|. .|| -.+||+.
T Consensus 749 DNFASIVtGVEEGRLi 764 (1019)
T KOG0203|consen 749 DNFASIVTGVEEGRLI 764 (1019)
T ss_pred Ccchhheeecccceeh
Confidence 222 344 5778854
No 302
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=33.84 E-value=19 Score=34.70 Aligned_cols=38 Identities=26% Similarity=0.273 Sum_probs=27.7
Q ss_pred cccHHHHHHHHhcCCCC-----CceEEEeCCcCcHHHHhcccc
Q 042288 179 GKNKAGALMKMLGDDEE-----MPDIGLGDRKTDSLFLNLCKE 216 (515)
Q Consensus 179 g~~K~~~l~~~~~~~~~-----~~~~aygDS~~DlpmL~~a~~ 216 (515)
+..|-.+++.++...+. ...++.||..+|-.|++.+..
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~ 205 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRE 205 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTT
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHh
Confidence 44599999999887432 246778999999999998776
No 303
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=32.88 E-value=24 Score=34.13 Aligned_cols=21 Identities=24% Similarity=0.637 Sum_probs=16.8
Q ss_pred CCeEEEEecCCccccCCCchH
Q 042288 27 EKDTVVADVDGTLLRGRSSFP 47 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~ds~~~ 47 (515)
..+.++||+||||+++...++
T Consensus 7 ~~~~~~~D~dG~l~~~~~~~p 27 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGNHTYP 27 (242)
T ss_pred cCCEEEEecccccccCCccCc
Confidence 456899999999999876543
No 304
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=32.59 E-value=69 Score=31.54 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=25.3
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
+++.++++| +.+++||-+...+.+++++ +|++
T Consensus 29 ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~ 61 (273)
T PRK00192 29 ALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLE 61 (273)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCC
Confidence 344566688 5677999999999999998 9975
No 305
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=32.56 E-value=76 Score=29.87 Aligned_cols=34 Identities=32% Similarity=0.378 Sum_probs=25.5
Q ss_pred HHHHhCC-CEEEEecCcHHHHHHHHHhhcCC-cEEEe
Q 042288 123 RVFSSCG-RRCVLTANPRIMVEAFLKDFLGA-DMVIG 157 (515)
Q Consensus 123 ~~l~~~G-~~vivSaS~~~~v~~ia~~~lGi-d~vig 157 (515)
+.++++| +.+++||-+...++++++. +|. +.+|+
T Consensus 25 ~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l~~~~~~i~ 60 (225)
T TIGR01482 25 RKAESVGIPVVLVTGNSVQFARALAKL-IGTPDPVIA 60 (225)
T ss_pred HHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCeEEE
Confidence 3456689 5677999999999999998 885 34444
No 306
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=32.09 E-value=82 Score=30.21 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=26.3
Q ss_pred HHHHHHhCCC-EEEEecCcHHHHHHHHHhhcCCc-EEEe
Q 042288 121 TWRVFSSCGR-RCVLTANPRIMVEAFLKDFLGAD-MVIG 157 (515)
Q Consensus 121 ~~~~l~~~G~-~vivSaS~~~~v~~ia~~~lGid-~vig 157 (515)
+++.++++|+ .+++||-+..-+.+++++ +|++ .+|+
T Consensus 23 ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~~I~ 60 (225)
T TIGR02461 23 ALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPPFIV 60 (225)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCcEEE
Confidence 3445666895 566899988889999998 9974 3443
No 307
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=31.81 E-value=78 Score=30.76 Aligned_cols=37 Identities=22% Similarity=0.189 Sum_probs=27.0
Q ss_pred HHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc-EEEece
Q 042288 122 WRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD-MVIGTE 159 (515)
Q Consensus 122 ~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid-~vigt~ 159 (515)
++.++++| ..+++||-+...+.++++. +|++ .+||..
T Consensus 25 i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~~~~~~~I~~N 63 (256)
T TIGR01486 25 LERLQELGIPVIPCTSKTAAEVEYLRKE-LGLEDPFIVEN 63 (256)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCcEEEcC
Confidence 33455678 5667899999999999998 9974 455433
No 308
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=30.67 E-value=70 Score=32.50 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=18.4
Q ss_pred CCCCeEEEEecCCccccCCCchH
Q 042288 25 GREKDTVVADVDGTLLRGRSSFP 47 (515)
Q Consensus 25 ~~~~~lavFD~DgTL~~~ds~~~ 47 (515)
++..--.+||.||.|++|.....
T Consensus 32 s~~~fgfafDIDGVL~RG~~~i~ 54 (389)
T KOG1618|consen 32 SPPTFGFAFDIDGVLFRGHRPIP 54 (389)
T ss_pred CCCceeEEEecccEEEecCCCCc
Confidence 34567889999999999987543
No 309
>PLN02382 probable sucrose-phosphatase
Probab=29.93 E-value=36 Score=36.11 Aligned_cols=17 Identities=24% Similarity=0.413 Sum_probs=13.4
Q ss_pred CCeEEEEecCCccccCC
Q 042288 27 EKDTVVADVDGTLLRGR 43 (515)
Q Consensus 27 ~~~lavFD~DgTL~~~d 43 (515)
.+-+++-|+||||++.+
T Consensus 8 ~~~lI~sDLDGTLL~~~ 24 (413)
T PLN02382 8 PRLMIVSDLDHTMVDHH 24 (413)
T ss_pred CCEEEEEcCCCcCcCCC
Confidence 35677779999999863
No 310
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=29.42 E-value=34 Score=31.26 Aligned_cols=19 Identities=32% Similarity=0.223 Sum_probs=15.9
Q ss_pred CCCeEEEEecCCccccCCC
Q 042288 26 REKDTVVADVDGTLLRGRS 44 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds 44 (515)
...+++++|+||||+..++
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~ 41 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH 41 (170)
T ss_pred CCCCEEEEecCCccccCCC
Confidence 4568999999999998665
No 311
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=28.79 E-value=91 Score=29.35 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=28.0
Q ss_pred HHHHHHhCCC-EEEEecCcHHHHHHHHHhhcCCc-EEEece
Q 042288 121 TWRVFSSCGR-RCVLTANPRIMVEAFLKDFLGAD-MVIGTE 159 (515)
Q Consensus 121 ~~~~l~~~G~-~vivSaS~~~~v~~ia~~~lGid-~vigt~ 159 (515)
+++.++++|+ .+++||=+...+.++.+. ++++ .+|+..
T Consensus 23 al~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~~~~~~I~~n 62 (254)
T PF08282_consen 23 ALKELQEKGIKLVIATGRSYSSIKRLLKE-LGIDDYFICSN 62 (254)
T ss_dssp HHHHHHHTTCEEEEECSSTHHHHHHHHHH-TTHCSEEEEGG
T ss_pred HHHhhcccceEEEEEccCccccccccccc-ccchhhhcccc
Confidence 3445566885 566899999999999998 9986 555543
No 312
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=28.15 E-value=84 Score=36.18 Aligned_cols=103 Identities=13% Similarity=0.119 Sum_probs=61.9
Q ss_pred cCCCcH---HHHHHHHhCCC-EEEEecCcHHHHHHHHHhhcCC----cE---EEeceEEE-eC---ceeeeEEe--cCCc
Q 042288 114 SGDLHP---ETWRVFSSCGR-RCVLTANPRIMVEAFLKDFLGA----DM---VIGTEICV-YK---GRSTGFVK--SPGV 176 (515)
Q Consensus 114 ~~~~~~---~~~~~l~~~G~-~vivSaS~~~~v~~ia~~~lGi----d~---vigt~l~~-~~---G~~tG~i~--~~~~ 176 (515)
++-.+| ++++..+++|. +-.|||-.-.-++.||.+ .|| ++ +-|.++.- .+ .++-.++. .. .
T Consensus 645 kDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlAR-S 722 (1034)
T KOG0204|consen 645 KDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLAR-S 722 (1034)
T ss_pred cCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCCCccceecchhhhhcCHHHHHhhhhhheeeec-C
Confidence 444555 45566778995 457999999999999999 997 11 11222110 00 00111111 00 0
Q ss_pred cccccHHHHHHHHhcCCCCCceEE-EeCCcCcHHHHhccccceeeCC
Q 042288 177 LVGKNKAGALMKMLGDDEEMPDIG-LGDRKTDSLFLNLCKESYMVPP 222 (515)
Q Consensus 177 ~~g~~K~~~l~~~~~~~~~~~~~a-ygDS~~DlpmL~~a~~~~~Vnp 222 (515)
....|..-++.+... +..+| -||+.||-|-|+.|+-.++..=
T Consensus 723 -SP~DK~lLVk~L~~~---g~VVAVTGDGTNDaPALkeADVGlAMGI 765 (1034)
T KOG0204|consen 723 -SPNDKHLLVKGLIKQ---GEVVAVTGDGTNDAPALKEADVGLAMGI 765 (1034)
T ss_pred -CCchHHHHHHHHHhc---CcEEEEecCCCCCchhhhhcccchhccc
Confidence 233565555555432 44555 5999999999999999988764
No 313
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=27.79 E-value=64 Score=33.18 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=32.6
Q ss_pred CcHHHHHHHHhCCCEEEEecCcHHHHHHHHHhhcCCcE
Q 042288 117 LHPETWRVFSSCGRRCVLTANPRIMVEAFLKDFLGADM 154 (515)
Q Consensus 117 ~~~~~~~~l~~~G~~vivSaS~~~~v~~ia~~~lGid~ 154 (515)
++..+++.++++||.++||+-....+..+++. +|+++
T Consensus 15 fFk~~I~eL~~~GheV~it~R~~~~~~~LL~~-yg~~y 51 (335)
T PF04007_consen 15 FFKNIIRELEKRGHEVLITARDKDETEELLDL-YGIDY 51 (335)
T ss_pred HHHHHHHHHHhCCCEEEEEEeccchHHHHHHH-cCCCe
Confidence 55678889999999999999988888999998 99985
No 314
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=27.76 E-value=2.1e+02 Score=26.71 Aligned_cols=38 Identities=26% Similarity=0.208 Sum_probs=26.1
Q ss_pred ccHHHHHHHHhcCCCC--CceEEEeCCcCcHHHHhccccc
Q 042288 180 KNKAGALMKMLGDDEE--MPDIGLGDRKTDSLFLNLCKES 217 (515)
Q Consensus 180 ~~K~~~l~~~~~~~~~--~~~~aygDS~~DlpmL~~a~~~ 217 (515)
.-|..-+.+++++.+. ..++.+||+.+|+..=+.++..
T Consensus 105 KP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 105 KPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 3455567777665332 3468899999999988766653
No 315
>PF15202 Adipogenin: Adipogenin
Probab=27.76 E-value=77 Score=24.29 Aligned_cols=24 Identities=38% Similarity=0.501 Sum_probs=18.1
Q ss_pred cchhhHHHHhhhHHHHHHHHHHHH
Q 042288 249 PTPFMALLTILWIPVGFLLACLRM 272 (515)
Q Consensus 249 p~~~~~l~~~l~~p~~l~~~~~r~ 272 (515)
..++..+.+++.+|+|++++++-+
T Consensus 11 dltfsflvfwlclpv~lllfl~iv 34 (81)
T PF15202_consen 11 DLTFSFLVFWLCLPVGLLLFLLIV 34 (81)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 355677888899999998876543
No 316
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=27.23 E-value=41 Score=34.91 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=14.8
Q ss_pred CeEEEEecCCccccCCC
Q 042288 28 KDTVVADVDGTLLRGRS 44 (515)
Q Consensus 28 ~~lavFD~DgTL~~~ds 44 (515)
+++++||.||||+...+
T Consensus 2 ~k~l~lDrDgtl~~~~~ 18 (354)
T PRK05446 2 QKILFIDRDGTLIEEPP 18 (354)
T ss_pred CcEEEEeCCCCccCCCC
Confidence 68999999999999654
No 317
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.53 E-value=39 Score=36.19 Aligned_cols=80 Identities=13% Similarity=0.082 Sum_probs=41.2
Q ss_pred HHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCCCCCc-e-EE
Q 042288 124 VFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDDEEMP-D-IG 200 (515)
Q Consensus 124 ~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~~~~~-~-~a 200 (515)
.++++| ...|+|=..+--++.+.+.| -|.++- ...++-.. | .=+.|++.+++.+.+.+.+. + ++
T Consensus 266 ~l~kqGVlLav~SKN~~~da~evF~kh--p~MiLk------eedfa~~~----i-NW~~K~eNirkIAkklNlg~dSmvF 332 (574)
T COG3882 266 GLKKQGVLLAVCSKNTEKDAKEVFRKH--PDMILK------EEDFAVFQ----I-NWDPKAENIRKIAKKLNLGLDSMVF 332 (574)
T ss_pred HHHhccEEEEEecCCchhhHHHHHhhC--CCeEee------Hhhhhhhe----e-cCCcchhhHHHHHHHhCCCccceEE
Confidence 455677 44667777777676666652 122221 11122111 2 22347777777766644333 2 44
Q ss_pred EeCCcCcHHHHhcccc
Q 042288 201 LGDRKTDSLFLNLCKE 216 (515)
Q Consensus 201 ygDS~~DlpmL~~a~~ 216 (515)
.-|+.--.++.+....
T Consensus 333 iDD~p~ErE~vk~~~~ 348 (574)
T COG3882 333 IDDNPAERELVKRELP 348 (574)
T ss_pred ecCCHHHHHHHHhcCc
Confidence 4566666666655544
No 318
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=26.50 E-value=43 Score=32.23 Aligned_cols=38 Identities=5% Similarity=-0.060 Sum_probs=25.6
Q ss_pred EEEeCCcCcHHHHhccccceeeCCCCCCCcccccCCCCceE-EccCc
Q 042288 199 IGLGDRKTDSLFLNLCKESYMVPPNPKVDPVSQDKLPKPIV-FHDGR 244 (515)
Q Consensus 199 ~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~~r 244 (515)
..|+|+ .|-++-+.+|.| +++..+|. ++.-... |..++
T Consensus 120 ~~~~~~-d~~ei~e~TGlp------re~aaLa~-~rEyseti~~rs~ 158 (274)
T COG3769 120 TTFDDV-DDEEIAEWTGLP------REQAALAM-LREYSETIIWRSS 158 (274)
T ss_pred eEeccC-CHHHHHHHhCCC------hHHhHHHH-HHHhhhheeeccc
Confidence 345654 688888899887 77788887 6666543 44333
No 319
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=26.49 E-value=37 Score=39.84 Aligned_cols=53 Identities=21% Similarity=0.244 Sum_probs=33.2
Q ss_pred eEEEeCceeeeEEecCCccccccHHHHHHHHhcCC--------CCCceEEEeCCc-CcHHHHhccc
Q 042288 159 EICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD--------EEMPDIGLGDRK-TDSLFLNLCK 215 (515)
Q Consensus 159 ~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~--------~~~~~~aygDS~-~DlpmL~~a~ 215 (515)
.+++..|+..=++.. .|-.|-.+++.++... ..+..++.||.. +|-.|++...
T Consensus 750 ~v~V~~Gk~VVEVrP----~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 750 AVDVVQGSRSVEVRP----VGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred CcEEEeCCeEEEEEc----CCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 355555554445543 4667888888776631 123467889975 4999998653
No 320
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=25.76 E-value=40 Score=31.33 Aligned_cols=14 Identities=29% Similarity=0.446 Sum_probs=10.9
Q ss_pred eE-EEEecCCccccC
Q 042288 29 DT-VVADVDGTLLRG 42 (515)
Q Consensus 29 ~l-avFD~DgTL~~~ 42 (515)
++ +.+|+||||.+.
T Consensus 2 ~i~I~iDiDgVLad~ 16 (191)
T PF06941_consen 2 KIRIAIDIDGVLADF 16 (191)
T ss_dssp -EEEEEESBTTTB-H
T ss_pred CcEEEEECCCCCccc
Confidence 56 899999999994
No 321
>KOG3360 consensus Acylphosphatase [Energy production and conversion]
Probab=25.64 E-value=1.8e+02 Score=24.15 Aligned_cols=47 Identities=19% Similarity=0.140 Sum_probs=36.0
Q ss_pred cHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcCC
Q 042288 138 PRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD 193 (515)
Q Consensus 138 ~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~ 193 (515)
++.+...-|+. ||+-.++.+. ++|.+.|.+.||. +|+..+++|+...
T Consensus 23 fr~~t~~~a~~-lGlrGWv~Nt---~~GtvkG~leGp~-----~~vd~mk~wl~~~ 69 (98)
T KOG3360|consen 23 FRKHTLDEAKK-LGLRGWVMNT---SEGTVKGQLEGPP-----EKVDEMKEWLLTR 69 (98)
T ss_pred hhHHHHHHHHh-hcceEEEEec---CCceEEEEEeCCH-----HHHHHHHHHHHhc
Confidence 55666677888 8987655543 5799999999974 5999999998754
No 322
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=25.13 E-value=40 Score=39.01 Aligned_cols=54 Identities=19% Similarity=0.174 Sum_probs=36.2
Q ss_pred eEEEeCceeeeEEecCCccccccHHHHHHHHhcCC--------CCCceEEEeCCc-CcHHHHhcccc
Q 042288 159 EICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGDD--------EEMPDIGLGDRK-TDSLFLNLCKE 216 (515)
Q Consensus 159 ~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~~--------~~~~~~aygDS~-~DlpmL~~a~~ 216 (515)
.+++..|+..=++.. .|-.|-.+++.++... +.+..++.||.. +|=.|++.-..
T Consensus 660 ~~~v~~Gk~vvEvrp----~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~ 722 (797)
T PLN03063 660 SVDVVRGQKSVEVHA----IGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEP 722 (797)
T ss_pred CcEEEECCeEEEEEc----CCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccc
Confidence 456666666656653 5667888888877531 123467899975 59999996653
No 323
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=25.04 E-value=1.4e+02 Score=30.19 Aligned_cols=32 Identities=9% Similarity=0.159 Sum_probs=25.0
Q ss_pred HHHHHHhCC-CEEEEecCcHHHHHHHHHhhcCCc
Q 042288 121 TWRVFSSCG-RRCVLTANPRIMVEAFLKDFLGAD 153 (515)
Q Consensus 121 ~~~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid 153 (515)
+++.++++| .++++||=...-++++.++ ||++
T Consensus 26 aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~ 58 (302)
T PRK12702 26 ALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRLE 58 (302)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCC
Confidence 445667789 4566888888889999998 9986
No 324
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=23.86 E-value=3.9e+02 Score=31.08 Aligned_cols=24 Identities=13% Similarity=0.217 Sum_probs=21.1
Q ss_pred CCCcEEEEeCCCCCCcHHHHHHhc
Q 042288 309 GQTGVLFICSHRTLLDPIFLSTAL 332 (515)
Q Consensus 309 ~~~~~IiVaNH~S~lD~~~l~~~~ 332 (515)
.++|.++|--+.|..|.+++-..+
T Consensus 37 ~~~pi~yvl~~~s~~d~l~l~~~~ 60 (818)
T PRK04974 37 PSRPIVYVLPYNSLSDLLTLRKQC 60 (818)
T ss_pred CCCCEEEEeCCCchhhHHHHHHHH
Confidence 578999999999999999997653
No 325
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=23.78 E-value=1.3e+02 Score=27.07 Aligned_cols=19 Identities=32% Similarity=0.412 Sum_probs=15.7
Q ss_pred CCCeEEEEecCCccccCCC
Q 042288 26 REKDTVVADVDGTLLRGRS 44 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds 44 (515)
..+...|+|+|+||+++..
T Consensus 4 ~~kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTK 22 (156)
T ss_pred CCceEEEEeCCCCcccccc
Confidence 4567899999999999643
No 326
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=23.53 E-value=50 Score=30.34 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=15.9
Q ss_pred CCCeEEEEecCCccccCCC
Q 042288 26 REKDTVVADVDGTLLRGRS 44 (515)
Q Consensus 26 ~~~~lavFD~DgTL~~~ds 44 (515)
..-+-+++|+|.||+.-|.
T Consensus 26 ~Gikgvi~DlDNTLv~wd~ 44 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDN 44 (175)
T ss_pred cCCcEEEEeccCceecccC
Confidence 4468899999999999774
No 327
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=22.70 E-value=48 Score=32.97 Aligned_cols=15 Identities=53% Similarity=0.784 Sum_probs=13.7
Q ss_pred CCeEEEEecCCcccc
Q 042288 27 EKDTVVADVDGTLLR 41 (515)
Q Consensus 27 ~~~lavFD~DgTL~~ 41 (515)
.+.+++||+|+|+++
T Consensus 100 ~~dA~V~DIDET~Ls 114 (275)
T TIGR01680 100 EKDTFLFNIDGTALS 114 (275)
T ss_pred CCCEEEEECcccccc
Confidence 468999999999998
No 328
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=21.63 E-value=1.7e+02 Score=26.22 Aligned_cols=55 Identities=20% Similarity=0.247 Sum_probs=38.3
Q ss_pred HHHHhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeceEEEeCceeeeEEecCCccccccHHHHHHHHhcC
Q 042288 123 RVFSSCG-RRCVLTANPRIMVEAFLKDFLGADMVIGTEICVYKGRSTGFVKSPGVLVGKNKAGALMKMLGD 192 (515)
Q Consensus 123 ~~l~~~G-~~vivSaS~~~~v~~ia~~~lGid~vigt~l~~~~G~~tG~i~~~~~~~g~~K~~~l~~~~~~ 192 (515)
+.+++.| ..++..|.+...+..++++ +|++.|++++- + + . ...+..+++++++.+
T Consensus 60 ~~L~~~g~~L~v~~g~~~~~l~~l~~~-~~~~~V~~~~~-~----------~--~-~~~~rd~~v~~~l~~ 115 (165)
T PF00875_consen 60 ESLRKLGIPLLVLRGDPEEVLPELAKE-YGATAVYFNEE-Y----------T--P-YERRRDERVRKALKK 115 (165)
T ss_dssp HHHHHTTS-EEEEESSHHHHHHHHHHH-HTESEEEEE--------------S--H-HHHHHHHHHHHHHHH
T ss_pred HHHHhcCcceEEEecchHHHHHHHHHh-cCcCeeEeccc-c----------C--H-HHHHHHHHHHHHHHh
Confidence 3566788 5677899999999999999 99999888763 1 1 1 344455577777765
No 329
>PF08621 RPAP1_N: RPAP1-like, N-terminal; InterPro: IPR013930 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the N-terminal region of RPAP-1 that is conserved from yeast to humans.
Probab=20.76 E-value=1.8e+02 Score=20.94 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=27.0
Q ss_pred HHHHcCCCHHHHHHHHHHHhchhhcCCCcHHHHHHHHhCC
Q 042288 90 FATFAGMKVPSIESVARAVLPKFYSGDLHPETWRVFSSCG 129 (515)
Q Consensus 90 ~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~G 129 (515)
...+.+||.+++.+.-++...+ +-|..++.++.++
T Consensus 9 ~~rL~~MS~eEI~~er~eL~~~-----LdP~li~~L~~R~ 43 (49)
T PF08621_consen 9 EARLASMSPEEIEEEREELLES-----LDPKLIEFLKKRA 43 (49)
T ss_pred HHHHHhCCHHHHHHHHHHHHHh-----CCHHHHHHHHHhh
Confidence 4568899999999866666543 7899999887654
No 330
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=20.46 E-value=95 Score=29.80 Aligned_cols=13 Identities=38% Similarity=0.314 Sum_probs=7.9
Q ss_pred EEecCCccccCCC
Q 042288 32 VADVDGTLLRGRS 44 (515)
Q Consensus 32 vFD~DgTL~~~ds 44 (515)
++|+||||.+-.+
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6999999998544
Done!